Citrus Sinensis ID: 013973

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430---
Protein Sequence
MEMERVTEFPFSNLDRRPRKRARLGWDVPQVPKAQVGLFCGQEVGNVTSFAPPRAPSDHVTSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccEEEEccccccccccEEEEEEcccccEEEEEEEEccHHHHHHHHHHHHHHHHHHHcccccccEEEEcccccccccEEEEEccccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccccccccccEEEccccccccccccccccccccccccccccccccEEEEEcccccccccccEEEEccccccccEEEEccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHcccccHHHHHHHHHHHccccccccccHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccHcccccccccccccccccccccccccccEEEEEEcEEccccEEEEEEEEEcccEEEEEEEEccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHccccEEEEEEccccccccccEEEEEEcccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccEEcccccHHHEEccccccEEEcccccccccccccccccccccccEcEEccHHHcEEccEccccccccHHHccHHHHcccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccHHHHHcccHHHHHHHHcccccccccccHHHHHHHcccccccccHHHHHcccccHHHHHHHHHHccccccccccHHHHHccHHHHHccccc
Coil and Loop (DISEMBL)
memervtefpfsnldrrprkrarlgwdvpqvpkaqvglfcgqevgnvtsfapprapsdhvtssslfvkgvarngsppwreddkdghYMFALGENLTSRYKIhskmgegtfgqvLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAkhdkggnrcvqIRNWFDYRNHICIVFEKLGSSLYDFLrknnyrsfpIDLVREIARQLLECIAFMHDLCmihtdlkpenvLLVSseyikvpdyksslhtpkdssyfkrmpkssaikvidfgsttyerpdqnyivstrhyrapevilglgwtypcdiwsvGCILVELCTGEALFQTHENLEHLAMMERVlgplpqhmLKRVDRHAEKYVRrgrldwpegaasreSIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGllrydptdrltarealrhpfftrdhlrr
Flexible Loop (DISEMBL)
memervtefpfsnldrrprkrarlgwdvpqvPKAQVGLFCGQEVGNVTSFapprapsdhvtssslfvkgvarngsppwreddkdGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQqlakhdkggnrcVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYikvpdyksslhtpkdssyfkrmpkssaikvidfgsttyerpdqnyivstrhYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYvrrgrldwpegaasresiksvMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTArealrhpfftrdhlrr
Low Complexity Region (SEG)
MEMERVTEFPFSNLDRRPRKRARLGWDVPQVPKAQVGLFCGQEVGNVTSFAPPRAPSDHVTSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR
Disordered region (IsUnstruct)
**********************RLGWDVPQVPKAQVGLFCGQEVGNVTS***********************************GHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY********************AIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP**********SVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF*******
Disordered Region (DISOPRED)
*********************************************************************************DKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS*************MPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL******************************HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD****
Disordered Region (DISEMBL)
*********PFSNLDRRPRKRARLGWDVPQVPKAQVGLFCGQEVGNVTSFAPPRAPSDHVTSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR
Disordered Region (DISPRO)
**MERVTEFPFSNLDRRPRKRARLGWDVPQVPKAQVGLFCGQE********************************PPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEMERVTEFPFSNLDRRPRKRARLGWDVPQVPKAQVGLFCGQEVGNVTSFAPPRAPSDHVTSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	433	2.2.26 [Sep-21-2011]
P51567	427	Serine/threonine-protein	yes	no	0.979	0.992	0.829	0.0
P51566	467	Serine/threonine-protein	no	no	0.965	0.895	0.699	1e-180
P51568	400	Serine/threonine-protein	no	no	0.889	0.962	0.594	1e-143
Q10156	690	Dual specificity protein	yes	no	0.861	0.540	0.424	2e-92
O35491	499	Dual specificity protein	yes	no	0.773	0.671	0.474	1e-89
P49760	499	Dual specificity protein	yes	no	0.775	0.673	0.472	2e-89
P49762	832	Serine/threonine-protein	no	no	0.787	0.409	0.455	6e-87
Q9HAZ1	481	Dual specificity protein	no	no	0.771	0.694	0.469	3e-85
O35493	481	Dual specificity protein	no	no	0.771	0.694	0.461	3e-83
P49759	484	Dual specificity protein	no	no	0.771	0.690	0.455	8e-83

>sp|P51567|AFC2_ARATH Serine/threonine-protein kinase AFC2 OS=Arabidopsis thaliana GN=AFC2 PE=1 SV=1

 Score =  753 bits (1943), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/429 (82%), Positives = 397/429 (92%), Gaps = 5/429 (1%)

Query: 1   MEMERVTEFPFSNLDRRPRKRARLGWDV-PQVPKAQVGLFCGQEVGNVTSFAPPRAPSDH 59
           MEMERV EFP +++DRRPRKRARLGWDV PQ  KAQVG+FCGQE+GN++SFA   APSD+
Sbjct: 1   MEMERVHEFPHTHMDRRPRKRARLGWDVLPQATKAQVGMFCGQEIGNISSFASSGAPSDN 60

Query: 60  VTSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDR 119
             SSSL VKGVARNGSPPWREDDKDGHY+F LG++LT RYKI+SKMGEGTFGQVLECWDR
Sbjct: 61  --SSSLCVKGVARNGSPPWREDDKDGHYIFELGDDLTPRYKIYSKMGEGTFGQVLECWDR 118

Query: 120 ERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEK 179
           ERKEMVA+KIVRG+KKYREAAMIEIE+LQQL KHDKGGNRCVQIRNWFDYRNHICIVFEK
Sbjct: 119 ERKEMVAVKIVRGVKKYREAAMIEIEMLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEK 178

Query: 180 LGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIK 239
           LGSSLYDFLRKNNYRSFPIDLVREI  QLLEC+AFMHDL MIHTDLKPEN+LLVSS+Y+K
Sbjct: 179 LGSSLYDFLRKNNYRSFPIDLVREIGWQLLECVAFMHDLRMIHTDLKPENILLVSSDYVK 238

Query: 240 VPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLG 299
           +P+YK S    +D  Y KR+PKSSAIKVIDFGSTTYER DQ YIVSTRHYRAPEVILGLG
Sbjct: 239 IPEYKGS-RLQRDVCY-KRVPKSSAIKVIDFGSTTYERQDQTYIVSTRHYRAPEVILGLG 296

Query: 300 WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVR 359
           W+YPCD+WSVGCI+VELCTGEALFQTHENLEHLAMMERVLGP PQ MLK+VDRH+EKYVR
Sbjct: 297 WSYPCDVWSVGCIIVELCTGEALFQTHENLEHLAMMERVLGPFPQQMLKKVDRHSEKYVR 356

Query: 360 RGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE 419
           RGRLDWP+GA SR+S+K+V+KLPRLQNLIMQHVDHSAG+L +++QGLLR+DP++R+TARE
Sbjct: 357 RGRLDWPDGATSRDSLKAVLKLPRLQNLIMQHVDHSAGELINMVQGLLRFDPSERITARE 416

Query: 420 ALRHPFFTR 428
           ALRHPFF R
Sbjct: 417 ALRHPFFAR 425

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 2EC: .EC: 1

>sp|P51566|AFC1_ARATH Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2

 Score =  631 bits (1628), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 307/439 (69%), Positives = 350/439 (79%), Gaps = 21/439 (4%)

Query: 1   MEMERVTEFPFSNLDRRPRKRARLGWDVPQVPKA--------QVGLFCGQEV--GNVTSF 50
           +E +R  EFP   +D+RPRKR RL WD               Q  L+ G E   G V +F
Sbjct: 17  LETQRNVEFPHRIVDKRPRKRPRLTWDAAPPLLPPPPPPTVFQPPLYYGPEFASGLVPNF 76

Query: 51  APPRAPSDHVTSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTF 110
             P          ++F  G+ R GSPPWR DDKDGHY+F +G+ LT RY+I SKMGEGTF
Sbjct: 77  VYP----------NMFYNGLPRQGSPPWRPDDKDGHYVFVVGDTLTPRYQILSKMGEGTF 126

Query: 111 GQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR 170
           GQVLEC+D + KE+VAIK++R I KYREAAMIEI+VLQ+L +HD GG+RCVQIRNWFDYR
Sbjct: 127 GQVLECFDNKNKEVVAIKVIRSINKYREAAMIEIDVLQRLTRHDVGGSRCVQIRNWFDYR 186

Query: 171 NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENV 230
           NHICIVFEKLG SLYDFLRKN+YRSFPIDLVRE+ RQLLE +A+MHDL +IHTDLKPEN+
Sbjct: 187 NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAYMHDLRLIHTDLKPENI 246

Query: 231 LLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR 290
           LLVSSEYIK+PDYK      KD SYFK +PKSSAIK+IDFGSTT+E  D NYIVSTRHYR
Sbjct: 247 LLVSSEYIKIPDYKFLSRPTKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHNYIVSTRHYR 306

Query: 291 APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRV 350
           APEVILG+GW YPCD+WS+GCILVELC+GEALFQTHENLEHLAMMERVLGPLP HM+ R 
Sbjct: 307 APEVILGVGWNYPCDLWSIGCILVELCSGEALFQTHENLEHLAMMERVLGPLPPHMVLRA 366

Query: 351 DRHAEKYVRRG-RLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY 409
           DR +EKY RRG +LDWPEGA SR+S+K+V KLPRL NLIMQHVDHSAGDL  LLQGLLRY
Sbjct: 367 DRRSEKYFRRGAKLDWPEGATSRDSLKAVWKLPRLPNLIMQHVDHSAGDLIDLLQGLLRY 426

Query: 410 DPTDRLTAREALRHPFFTR 428
           DPT+R  AREAL HPFFTR
Sbjct: 427 DPTERFKAREALNHPFFTR 445

Activator of yeast transcription factor, STE12.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P51568|AFC3_ARATH Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana GN=AFC3 PE=2 SV=2

 Score =  509 bits (1311), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 251/422 (59%), Positives = 316/422 (74%), Gaps = 37/422 (8%)

Query: 11  FSNLDR-RPRKRARLGWD-VPQVPKAQVGLFCGQEVGNVTSFAPPRAPSDHVTSSSLFVK 68
           F ++D+ R RKR R+ WD  P  P+A+  +                            +K
Sbjct: 6   FESMDKERVRKRPRMTWDEAPAEPEAKRAV----------------------------IK 37

Query: 69  GVARNG---SPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMV 125
           G   +G   SPP R+DD+DGHY+F+L +NLT RYKI SKMGEGTFG+VLECWDR+ KE V
Sbjct: 38  GHGSDGRILSPPLRDDDRDGHYVFSLRDNLTPRYKILSKMGEGTFGRVLECWDRDTKEYV 97

Query: 126 AIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLY 185
           AIKI+R IKKYR+AAMIEI+VLQ+L K DKG  RCVQ++NWFDYRNHICIVFEKLG SL+
Sbjct: 98  AIKIIRSIKKYRDAAMIEIDVLQKLVKSDKGRTRCVQMKNWFDYRNHICIVFEKLGPSLF 157

Query: 186 DFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS 245
           DFL++N Y +FP+ LVR+   QLLE +A+MH+L ++HTDLKPEN+LLVSSE +K+PD K 
Sbjct: 158 DFLKRNKYSAFPLALVRDFGCQLLESVAYMHELQLVHTDLKPENILLVSSENVKLPDNKR 217

Query: 246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCD 305
           S     + ++F+ +PKSSAIK+IDFGST  +    + IV TRHYR+PEVILGLGW+Y CD
Sbjct: 218 S---AANETHFRCLPKSSAIKLIDFGSTVCDNRIHHSIVQTRHYRSPEVILGLGWSYQCD 274

Query: 306 IWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG-RLD 364
           +WS+GCIL ELCTGEALFQTH+NLEHLAMMER LGPLP+HM ++  R AEKY RRG RL+
Sbjct: 275 LWSIGCILFELCTGEALFQTHDNLEHLAMMERALGPLPEHMTRKASRGAEKYFRRGCRLN 334

Query: 365 WPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 424
           WPEGA SRESI++V +L RL++++ +HVD++      LL GLL YDP++RLTA EAL HP
Sbjct: 335 WPEGANSRESIRAVKRLDRLKDMVSKHVDNTRSRFADLLYGLLAYDPSERLTANEALDHP 394

Query: 425 FF 426
           FF
Sbjct: 395 FF 396

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|Q10156|LKH1_SCHPO Dual specificity protein kinase lkh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=lkh1 PE=1 SV=3

 Score =  340 bits (871), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 177/417 (42%), Positives = 255/417 (61%), Gaps = 44/417 (10%)

Query: 16  RRPRKRARLGWDVPQVPKAQVGLFCGQEVGNVTSFAPPRAPSDHVTSSSLFVKGVARNGS 75
           R P+KR R  W     P  +V       V + T+F P           S F         
Sbjct: 308 RPPKKRKRAAWP----PYKKVDRVNVPVVHDTTAFDP-----------STF--------- 343

Query: 76  PPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK 135
                DD DGHY         +RY +   +G GTFG+V++C+D+      AIK+ R I K
Sbjct: 344 -----DDDDGHYKVVPNSKFANRYTVVRLLGHGTFGKVIQCYDQSTGRHCAIKVTRAIPK 398

Query: 136 YREAAMIEIEVLQQLAKHDKGG-NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYR 194
           YREA++IE+ VLQ +A  D    N+C+Q+R++FDYR HICIV +  G S++DFL+ NNY 
Sbjct: 399 YREASLIELRVLQTIAHSDPTNENKCIQLRDYFDYRKHICIVTDLFGWSVFDFLKNNNYI 458

Query: 195 SFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVS--SEYIKVPDYKSSLHTPKD 252
            FP+  ++ +++QL + +AF+H L ++HTDLKPENVLLVS  S  I++P Y++       
Sbjct: 459 PFPLKHIQMLSQQLFKSVAFLHSLGLVHTDLKPENVLLVSNASRTIRLP-YRN------- 510

Query: 253 SSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCI 312
             Y +++  S  I++IDFGS T+E    + +VSTRHYRAPE+ILGLGW+YPCD+WS+GCI
Sbjct: 511 --YSQKVLNSCEIRLIDFGSATFEDEYHSSVVSTRHYRAPEIILGLGWSYPCDVWSIGCI 568

Query: 313 LVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR-GRLDWPEGAAS 371
           LVEL TG+ALFQTHE+ EHL MME++LGP  ++M+ R  R ++++ +  G++ +P     
Sbjct: 569 LVELFTGQALFQTHEDSEHLCMMEKILGPFDRNMISRSSRTSQRFFKSDGKVRYPLSNTP 628

Query: 372 RESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           ++SI  +  L  L+ +        A  L  LL+ +  YDP  R+TA+EAL HPFFT+
Sbjct: 629 KKSINYLQSLQTLEQIFAVSSPEVAL-LLDLLKKVFVYDPKRRITAKEALWHPFFTQ 684

Protein kinase that may act as a negative regulator of filamentous growth and flocculation. Appears to have a role in normal cell wall and septum formation and in cell seperation. May have antagonistic function in the regulation of beta-glucan distribution between the sites for cell wall and septum assembly.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|O35491|CLK2_MOUSE Dual specificity protein kinase CLK2 OS=Mus musculus GN=Clk2 PE=1 SV=2

 Score =  330 bits (845), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 166/350 (47%), Positives = 235/350 (67%), Gaps = 15/350 (4%)

Query: 80  EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKKYRE 138
           EDD +GH ++ +G+ L  RY+I S +GEGTFG+V++C D  R    VA+KI++ ++KY+E
Sbjct: 143 EDDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGTQVALKIIKNVEKYKE 202

Query: 139 AAMIEIEVLQQLAKHD-KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFP 197
           AA +EI VL+++ + D    N CVQ+ +WFDY  H+CI FE LG S +DFL+ NNY  +P
Sbjct: 203 AARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYP 262

Query: 198 IDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK 257
           I  VR +A QL + + F+HD  + HTDLKPEN+L V+S+Y    +   +L   +D    +
Sbjct: 263 IHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDY----ELTYNLEKKRD----E 314

Query: 258 RMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 317
           R  KS+A++V+DFGS T++    + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E  
Sbjct: 315 RSVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYY 374

Query: 318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS 377
            G  LFQTH+N EHLAMMER+LGP+P  M+++  +  +KY  RGRLDW E  ++   ++ 
Sbjct: 375 VGFTLFQTHDNREHLAMMERILGPVPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVRE 432

Query: 378 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
             K P  + L  +  DH    L  L++ +L Y+P  RLT  EAL+HPFF 
Sbjct: 433 NCK-PLRRYLTSEAEDHHQ--LFDLIENMLEYEPAKRLTLGEALQHPFFA 479

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex. May be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing and can cause redistribution of SR proteins from speckles to a diffuse nucleoplasmic distribution. Acts as a suppressor of hepatic gluconeogenesis and glucose output by repressing PPARGC1A transcriptional activity on gluconeogenic genes via its phosphorylation. Phosphorylates PPP2R5B thereby stimulating the assembly of PP2A phosphatase with the PPP2R5B-AKT1 complex leading to dephosphorylation of AKT1. Phosphorylates: PTPN1, SRSF1 and SRSF3. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P49760|CLK2_HUMAN Dual specificity protein kinase CLK2 OS=Homo sapiens GN=CLK2 PE=1 SV=1

 Score =  329 bits (844), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 166/351 (47%), Positives = 236/351 (67%), Gaps = 15/351 (4%)

Query: 80  EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKKYRE 138
           EDD +GH ++ +G+ L  RY+I S +GEGTFG+V++C D  R    VA+KI++ ++KY+E
Sbjct: 144 EDDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKE 203

Query: 139 AAMIEIEVLQQLAKHD-KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFP 197
           AA +EI VL+++ + D    N CVQ+ +WFDY  H+CI FE LG S +DFL+ NNY  +P
Sbjct: 204 AARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYP 263

Query: 198 IDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK 257
           I  VR +A QL + + F+HD  + HTDLKPEN+L V+S+Y    +   +L   +D    +
Sbjct: 264 IHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDY----ELTYNLEKKRD----E 315

Query: 258 RMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 317
           R  KS+A++V+DFGS T++    + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E  
Sbjct: 316 RSVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYY 375

Query: 318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS 377
            G  LFQTH+N EHLAMMER+LGP+P  M+++  +  +KY  RGRLDW E  ++   ++ 
Sbjct: 376 VGFTLFQTHDNREHLAMMERILGPIPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVRE 433

Query: 378 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
             K P  + L  +  +H    L  L++ +L Y+P  RLT  EAL+HPFF R
Sbjct: 434 NCK-PLRRYLTSEAEEHHQ--LFDLIESMLEYEPAKRLTLGEALQHPFFAR 481

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex. May be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing and can cause redistribution of SR proteins from speckles to a diffuse nucleoplasmic distribution. Acts as a suppressor of hepatic gluconeogenesis and glucose output by repressing PPARGC1A transcriptional activity on gluconeogenic genes via its phosphorylation. Phosphorylates PPP2R5B thereby stimulating the assembly of PP2A phosphatase with the PPP2R5B-AKT1 complex leading to dephosphorylation of AKT1. Phosphorylates: PTPN1, SRSF1 and SRSF3. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P49762|DOA_DROME Serine/threonine-protein kinase Doa OS=Drosophila melanogaster GN=Doa PE=1 SV=2

 Score =  321 bits (823), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 162/356 (45%), Positives = 231/356 (64%), Gaps = 15/356 (4%)

Query: 77  PWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY 136
           P  +DD DGH ++  G+ L  RYKI + +GEGTFG+V++  D ER   +A+KI++ ++KY
Sbjct: 457 PVIQDDADGHLIYHTGDILHHRYKIMATLGEGTFGRVVKVKDMERDYCMALKIIKNVEKY 516

Query: 137 REAAMIEIEVLQQLAKHDKGGNR-CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRS 195
           REAA +EI  L+++A+ D   +  CV++ +WFDY  H+CIVFE LG S++DFLR+NNY  
Sbjct: 517 REAAKLEINALEKIAQKDPHCDHLCVKMIDWFDYHGHMCIVFEMLGLSVFDFLRENNYEP 576

Query: 196 FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 255
           +P+D VR +A QL   + F+HD  + HTDLKPEN+L V S+Y    ++K +         
Sbjct: 577 YPLDQVRHMAYQLCYSVKFLHDNRLTHTDLKPENILFVDSDYTSHYNHKINREV------ 630

Query: 256 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE 315
             R  K++ +++IDFGS T++    + IVSTRHYRAPEVIL LGW+ PCD+WS+GCIL E
Sbjct: 631 --RRVKNTDVRLIDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCILFE 688

Query: 316 LCTGEALFQTHENLEHLAMMERVLGPLPQHMLKR---VDRHAEKYVRRGRLDWPEGAASR 372
           L  G  LFQTH+N EHLAMMER+LG +P  M +      +   KY   G+LDW E +++ 
Sbjct: 689 LYLGITLFQTHDNREHLAMMERILGQIPYRMARNHTLYSKTKTKYFYHGKLDWDEKSSAG 748

Query: 373 ESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
             ++   K P     +    DH   +L  L++ +L Y+P+ R+T  EAL HPFF R
Sbjct: 749 RYVRDHCK-PLFLCQLSDSEDHC--ELFSLIKKMLEYEPSSRITLGEALHHPFFDR 801

Negative regulator of the copia retrotransposon element of the white (w) gene. In the eye, it is required for normal pigmentation, photoreceptor cell development and for organization of interommatidial bristles. Also essential for embryonic segmentation and differentiation of the nervous system. Functions in the control of alternative splicing by phosphorylating the argine/serine-rich splicing factors, SR proteins.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|Q9HAZ1|CLK4_HUMAN Dual specificity protein kinase CLK4 OS=Homo sapiens GN=CLK4 PE=1 SV=1

 Score =  316 bits (809), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 164/349 (46%), Positives = 232/349 (66%), Gaps = 15/349 (4%)

Query: 80  EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEM-VAIKIVRGIKKYRE 138
           EDD++GH +   G+ L +RY+I   +GEG FG+V+EC D     M VA+KIV+ + +YRE
Sbjct: 140 EDDEEGHLICQSGDVLRARYEIVDTLGEGAFGKVVECIDHGMDGMHVAVKIVKNVGRYRE 199

Query: 139 AAMIEIEVLQQLAKHDKGG-NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFP 197
           AA  EI+VL+ L   D     RCVQ+  WFD+  H+CIVFE LG S YDF+++N++  F 
Sbjct: 200 AARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCIVFELLGLSTYDFIKENSFLPFQ 259

Query: 198 IDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK 257
           ID +R++A Q+ + I F+H   + HTDLKPEN+L V S+Y  V  Y S +   +D    +
Sbjct: 260 IDHIRQMAYQICQSINFLHHNKLTHTDLKPENILFVKSDY--VVKYNSKM--KRD----E 311

Query: 258 RMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 317
           R  K++ IKV+DFGS TY+    + +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL+E  
Sbjct: 312 RTLKNTDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYY 371

Query: 318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS 377
            G  +FQTH++ EHLAMMER+LGP+PQHM+++  +   KY    +LDW E +++   ++ 
Sbjct: 372 LGFTVFQTHDSKEHLAMMERILGPIPQHMIQKTRK--RKYFHHNQLDWDEHSSAGRYVRR 429

Query: 378 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             K   L+  ++ H D     L  L++ +L YDPT R+T  EAL+HPFF
Sbjct: 430 RCKP--LKEFMLCH-DEEHEKLFDLVRRMLEYDPTQRITLDEALQHPFF 475

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex and may be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing. Phosphorylates SRSF1 and SRSF3. Required for the regulation of alternative splicing of MAPT/TAU. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|O35493|CLK4_MOUSE Dual specificity protein kinase CLK4 OS=Mus musculus GN=Clk4 PE=1 SV=1

 Score =  309 bits (792), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 161/349 (46%), Positives = 230/349 (65%), Gaps = 15/349 (4%)

Query: 80  EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEM-VAIKIVRGIKKYRE 138
           EDD++GH +   G+ L +RY+I   +GEG FG+V+EC D     + VA+KIV+ + +YRE
Sbjct: 140 EDDEEGHLICQSGDVLRARYEIVDTLGEGAFGKVVECIDHGMDGLHVAVKIVKNVGRYRE 199

Query: 139 AAMIEIEVLQQLAKHDKGG-NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFP 197
           AA  EI+VL+ L   D     RCVQ+  WFD+  H+CIVFE LG S YDF+++N++  F 
Sbjct: 200 AARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCIVFELLGLSTYDFIKENSFLPFQ 259

Query: 198 IDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK 257
           ID +R++A Q+ + I F+H   + HTDLKPEN+L V S+Y  V  Y S +   +D    +
Sbjct: 260 IDHIRQMAYQICQSINFLHHNKLTHTDLKPENILFVKSDY--VVKYNSKM--KRD----E 311

Query: 258 RMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 317
           R  K++ IKV+DFGS TY+    + +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL+E  
Sbjct: 312 RTLKNTDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYY 371

Query: 318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS 377
            G  +FQTH++ EHLAMMER+LGP+P HM+++  +   KY    +LDW E +++   ++ 
Sbjct: 372 LGFTVFQTHDSKEHLAMMERILGPIPAHMIQKTRK--RKYFHHNQLDWDEHSSAGRYVRR 429

Query: 378 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             K   L+  ++ H D     L  L++ +L YDP  R+T  EAL+HPFF
Sbjct: 430 RCKP--LKEFMLCH-DEEHEKLFDLVRRMLEYDPARRITLDEALQHPFF 475

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex and may be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing. Phosphorylates SRSF1 and SRSF3. Required for the regulation of alternative splicing of MAPT/TAU. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P49759|CLK1_HUMAN Dual specificity protein kinase CLK1 OS=Homo sapiens GN=CLK1 PE=1 SV=2

 Score =  307 bits (787), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 159/349 (45%), Positives = 228/349 (65%), Gaps = 15/349 (4%)

Query: 80  EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKKYRE 138
           EDD++GH +   G+ L++RY+I   +GEG FG+V+EC D +     VA+KIV+ + +Y E
Sbjct: 142 EDDEEGHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCE 201

Query: 139 AAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFP 197
           AA  EI+VL+ L   D     RCVQ+  WF++  HICIVFE LG S YDF+++N +  F 
Sbjct: 202 AARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFR 261

Query: 198 IDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK 257
           +D +R++A Q+ + + F+H   + HTDLKPEN+L V S+Y +  + K      +D    +
Sbjct: 262 LDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPK----IKRD----E 313

Query: 258 RMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 317
           R   +  IKV+DFGS TY+    + +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL+E  
Sbjct: 314 RTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYY 373

Query: 318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS 377
            G  +F TH++ EHLAMMER+LGPLP+HM+++  +   KY    RLDW E +++   +  
Sbjct: 374 LGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRK--RKYFHHDRLDWDEHSSAGRYVSR 431

Query: 378 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             K P  + ++ Q V+H    L  L+Q +L YDP  R+T REAL+HPFF
Sbjct: 432 RCK-PLKEFMLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPFF 477

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex and may be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing. Phosphorylates: SRSF1, SRSF3 and PTPN1. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells and adenovirus E1A pre-mRNA.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	433
255540473	435	afc, putative [Ricinus communis] gi|2235	1.0	0.995	0.901	0.0
225456860	435	PREDICTED: serine/threonine-protein kina	0.997	0.993	0.898	0.0
363806778	430	uncharacterized protein LOC100804452 [Gl	0.993	1.0	0.882	0.0
363807284	430	uncharacterized protein LOC100804022 [Gl	0.993	1.0	0.875	0.0
224135977	427	predicted protein [Populus trichocarpa]	0.983	0.997	0.875	0.0
147767048	421	hypothetical protein VITISV_035275 [Viti	0.965	0.992	0.871	0.0
449469580	433	PREDICTED: serine/threonine-protein kina	0.997	0.997	0.857	0.0
224121850	422	predicted protein [Populus trichocarpa]	0.974	1.0	0.869	0.0
356516617	425	PREDICTED: serine/threonine-protein kina	0.981	1.0	0.859	0.0
357461735	426	Serine/threonine protein kinase AFC2 [Me	0.983	1.0	0.849	0.0

>gi|255540473|ref|XP_002511301.1| afc, putative [Ricinus communis] gi|223550416|gb|EEF51903.1| afc, putative [Ricinus communis]

 Score =  822 bits (2122), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/435 (90%), Positives = 411/435 (94%), Gaps = 2/435 (0%)

Query: 1   MEMERVTEFPFSNLDRRPRKRARLGWDVPQVPKAQVGLFCGQEVGNVTSFAPPRAPSDHV 60
           MEMERVTEFP  +LDRRPRKRARLGWDVP VPKAQVG+FC QEVGNV S+A   A SDH 
Sbjct: 1   MEMERVTEFPLPHLDRRPRKRARLGWDVPLVPKAQVGMFCAQEVGNVASYASSGANSDHT 60

Query: 61  T-SSSLFVKGVA-RNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWD 118
           T SSS+F+KGVA RNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWD
Sbjct: 61  TTSSSVFLKGVAPRNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWD 120

Query: 119 RERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE 178
           RERKEMVAIKIVRGIKKYREAAMIEI+VLQQL KHDKGGNRCVQIRNWFDYRNHICIVFE
Sbjct: 121 RERKEMVAIKIVRGIKKYREAAMIEIDVLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFE 180

Query: 179 KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI 238
           KLG SLYDFLRKNNYRSFPIDLVREI RQLLECIAFMHDL +IHTDLKPEN+LLVS +Y+
Sbjct: 181 KLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECIAFMHDLHLIHTDLKPENILLVSPDYV 240

Query: 239 KVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL 298
           KVPDYK S  +PKDSSYFKR+PKSSA+KVIDFGSTTYER DQNYIVSTRHYRAPEVILGL
Sbjct: 241 KVPDYKGSTRSPKDSSYFKRVPKSSAVKVIDFGSTTYERQDQNYIVSTRHYRAPEVILGL 300

Query: 299 GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYV 358
           GW+YPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKR+DRHAEKYV
Sbjct: 301 GWSYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRIDRHAEKYV 360

Query: 359 RRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 418
           RRGRLDWPEGA SRESIK+V+KLPRLQNL+MQHVDHSAGDL HLLQGLLRYDP+DRLTAR
Sbjct: 361 RRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGDLIHLLQGLLRYDPSDRLTAR 420

Query: 419 EALRHPFFTRDHLRR 433
           EALRHPFF RDHLRR
Sbjct: 421 EALRHPFFARDHLRR 435

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225456860|ref|XP_002279764.1| PREDICTED: serine/threonine-protein kinase AFC2 [Vitis vinifera] gi|297733679|emb|CBI14926.3| unnamed protein product [Vitis vinifera]

 Score =  816 bits (2108), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/435 (89%), Positives = 412/435 (94%), Gaps = 3/435 (0%)

Query: 1   MEM-ERVTEFPFSNLDRRPRKRARLGWDV-PQVPKAQVGLFCGQEVGNVTSFAPPRAPSD 58
           MEM ERVTEFP +++DRRPRKR RLGWDV PQ PKAQ+G+FCGQEVGNV SFAP +A SD
Sbjct: 1   MEMVERVTEFPHTHMDRRPRKRPRLGWDVLPQAPKAQLGMFCGQEVGNVASFAPSKAHSD 60

Query: 59  HVTSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWD 118
             T+SS+FVKGVARNGSPPWREDDKDGHY+FALGENLTSRYKI+SKMGEGTFGQVLECWD
Sbjct: 61  Q-TTSSMFVKGVARNGSPPWREDDKDGHYIFALGENLTSRYKINSKMGEGTFGQVLECWD 119

Query: 119 RERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE 178
           RERKEMVA+KIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE
Sbjct: 120 RERKEMVAVKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE 179

Query: 179 KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI 238
           KLG SLYDFLRKNNYRSFPIDLVREI RQLLEC+AFMHDL +IHTDLKPEN+LLVS EY+
Sbjct: 180 KLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECVAFMHDLRLIHTDLKPENILLVSPEYV 239

Query: 239 KVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL 298
           KVPDYK S  +PKD SYFKR+PKSSAIKVIDFGSTTYER DQNYIVSTRHYRAPEVILGL
Sbjct: 240 KVPDYKVSSRSPKDGSYFKRVPKSSAIKVIDFGSTTYERQDQNYIVSTRHYRAPEVILGL 299

Query: 299 GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYV 358
           GW+YPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYV
Sbjct: 300 GWSYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYV 359

Query: 359 RRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 418
           RRGRLDWPEGA SRESIK+V+KLPRLQNLIMQHVDHSAGDL HLLQGLLRYDP+DRLTA 
Sbjct: 360 RRGRLDWPEGATSRESIKAVLKLPRLQNLIMQHVDHSAGDLIHLLQGLLRYDPSDRLTAL 419

Query: 419 EALRHPFFTRDHLRR 433
            ALRHPFFTRDHLRR
Sbjct: 420 GALRHPFFTRDHLRR 434

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363806778|ref|NP_001242280.1| uncharacterized protein LOC100804452 [Glycine max] gi|255635653|gb|ACU18176.1| unknown [Glycine max]

 Score =  791 bits (2043), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/433 (88%), Positives = 405/433 (93%), Gaps = 3/433 (0%)

Query: 1   MEMERVTEFPFSNLDRRPRKRARLGWDVPQVPKAQVGLFCGQEVGNVTSFAPPRAPSDHV 60
           MEMERV EFP +++DRRPRKRARLGWD+P+VPKAQVGLFCGQ+VG ++SFAP R PS++ 
Sbjct: 1   MEMERVFEFPHTHMDRRPRKRARLGWDIPEVPKAQVGLFCGQDVGTISSFAPSRGPSEN- 59

Query: 61  TSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRE 120
           T+SSLFVK VARNGSPPWR+DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRE
Sbjct: 60  TTSSLFVKPVARNGSPPWRDDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRE 119

Query: 121 RKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL 180
           RKEMVA+KIVRGIKKYREAAMIEIEVLQQL KHDKGGNRCVQIRNWFDYRNHICIV EKL
Sbjct: 120 RKEMVAVKIVRGIKKYREAAMIEIEVLQQLGKHDKGGNRCVQIRNWFDYRNHICIVLEKL 179

Query: 181 GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKV 240
           G SLYDFLRKNNYRSFPIDLVREI RQLLECIAFMHDL MIHTDLKPEN+LLVS EY+KV
Sbjct: 180 GPSLYDFLRKNNYRSFPIDLVREIGRQLLECIAFMHDLRMIHTDLKPENILLVSPEYVKV 239

Query: 241 PDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGW 300
           PDYKSS  +   SSYFKR+PKSSAIKVIDFGSTTYER DQNYIVSTRHYRAPEVILGLGW
Sbjct: 240 PDYKSSSRS--PSSYFKRVPKSSAIKVIDFGSTTYEREDQNYIVSTRHYRAPEVILGLGW 297

Query: 301 TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
           +YPCDIWSVGCILVELCTG ALFQTHENLEHLAMMERVLGPLPQ MLKRVDRHAEKYVRR
Sbjct: 298 SYPCDIWSVGCILVELCTGGALFQTHENLEHLAMMERVLGPLPQPMLKRVDRHAEKYVRR 357

Query: 361 GRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA 420
           GRLDWPEGA SRESIK+VM LPRLQNL+MQHVDHSAGDL HLLQGLLRYDP++RLTA+EA
Sbjct: 358 GRLDWPEGATSRESIKAVMNLPRLQNLVMQHVDHSAGDLIHLLQGLLRYDPSERLTAKEA 417

Query: 421 LRHPFFTRDHLRR 433
           LRH FF RD  RR
Sbjct: 418 LRHSFFMRDQFRR 430

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807284|ref|NP_001242619.1| uncharacterized protein LOC100804022 [Glycine max] gi|255634850|gb|ACU17784.1| unknown [Glycine max]

 Score =  791 bits (2042), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/433 (87%), Positives = 404/433 (93%), Gaps = 3/433 (0%)

Query: 1   MEMERVTEFPFSNLDRRPRKRARLGWDVPQVPKAQVGLFCGQEVGNVTSFAPPRAPSDHV 60
           MEMERV EFP + +DRRPRKRARLGWD+P+VPKAQVGLFCGQ+VG ++SFAP R PS+H 
Sbjct: 1   MEMERVFEFPHTYMDRRPRKRARLGWDIPEVPKAQVGLFCGQDVGTISSFAPSRGPSEH- 59

Query: 61  TSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRE 120
           T+SSLFVK VARNGSPPWR+DDKDGHYMF LGENLTSRYKIH+KMGEGTFGQVLECWDRE
Sbjct: 60  TTSSLFVKPVARNGSPPWRDDDKDGHYMFTLGENLTSRYKIHTKMGEGTFGQVLECWDRE 119

Query: 121 RKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL 180
           RKEMVA+KIVRGIKKYREAAMIEIEVLQQL KHDKGGNRCVQIRNWFDYRNHICIVFEKL
Sbjct: 120 RKEMVAVKIVRGIKKYREAAMIEIEVLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEKL 179

Query: 181 GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKV 240
           G SLYDFLRKNNYRSFPIDLVREI +QLLECIAFMHDL MIHTDLKPEN+LLVS EY+KV
Sbjct: 180 GPSLYDFLRKNNYRSFPIDLVREIGKQLLECIAFMHDLRMIHTDLKPENILLVSPEYVKV 239

Query: 241 PDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGW 300
           PDYKSS  +    SYFKR+PKSSAIKVIDFGSTTYER DQNYIVSTRHYRAPEVILGLGW
Sbjct: 240 PDYKSSSRS--SCSYFKRVPKSSAIKVIDFGSTTYEREDQNYIVSTRHYRAPEVILGLGW 297

Query: 301 TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
           +YPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLG LPQ M+KRVDRHAEKYVRR
Sbjct: 298 SYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGSLPQTMMKRVDRHAEKYVRR 357

Query: 361 GRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA 420
           GRLDWPEGA SRESIK+VMKLPRLQNL+MQHVD SAGDL HLLQGLLRYDP++RLTA+EA
Sbjct: 358 GRLDWPEGATSRESIKAVMKLPRLQNLVMQHVDRSAGDLIHLLQGLLRYDPSERLTAKEA 417

Query: 421 LRHPFFTRDHLRR 433
           LRH FF R+H RR
Sbjct: 418 LRHSFFMREHFRR 430

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224135977|ref|XP_002322208.1| predicted protein [Populus trichocarpa] gi|222869204|gb|EEF06335.1| predicted protein [Populus trichocarpa]

 Score =  790 bits (2039), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/432 (87%), Positives = 403/432 (93%), Gaps = 6/432 (1%)

Query: 1   MEMERVTEFPFSNLDRRPRKRARLGWDVPQVPKAQVGLFCGQEVGNVTSFAPPRAPSDHV 60
           MEME VT FP ++LDR PRKR R GWDVPQ   AQVG FCGQEVGNV S+A   A SDH 
Sbjct: 1   MEMEHVTIFPITHLDR-PRKRPRFGWDVPQ---AQVGNFCGQEVGNVASYASSGAISDH- 55

Query: 61  TSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRE 120
            +SSLFVKGVA+NGSPPWREDDKDGHYMFALG+NLTSRYKIH+KMGEGTFGQVLECWDRE
Sbjct: 56  -TSSLFVKGVAQNGSPPWREDDKDGHYMFALGDNLTSRYKIHNKMGEGTFGQVLECWDRE 114

Query: 121 RKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL 180
           RKEMVAIKIVRGIKKY+EAAMIEIEVLQQL KHDKGGNRCVQIRNWFDYRNHICIVFEKL
Sbjct: 115 RKEMVAIKIVRGIKKYKEAAMIEIEVLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEKL 174

Query: 181 GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKV 240
           G SLYDFLRKNNYRSFPID VREI RQLLEC+AFMHDL MIHTDLKPEN+LLVSS+Y+KV
Sbjct: 175 GPSLYDFLRKNNYRSFPIDHVREIGRQLLECVAFMHDLHMIHTDLKPENILLVSSDYVKV 234

Query: 241 PDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGW 300
           PDYK+S  +PKDSSY+KR+PKSSAIKVIDFGSTTYER DQNYIVSTRHYRAPEVILGLGW
Sbjct: 235 PDYKNSTRSPKDSSYYKRVPKSSAIKVIDFGSTTYERQDQNYIVSTRHYRAPEVILGLGW 294

Query: 301 TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
           +YPCD+WSVGCILVELCTGEALFQTHENLEHLAMMERVLGP+PQ+MLKRVDRHAEK+VRR
Sbjct: 295 SYPCDVWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPMPQNMLKRVDRHAEKFVRR 354

Query: 361 GRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA 420
           GRLDWPEGAASRESIK+V+KLPRLQNL+MQHVDHSAGDL HLLQGLLRYDP DRLTAREA
Sbjct: 355 GRLDWPEGAASRESIKAVLKLPRLQNLVMQHVDHSAGDLIHLLQGLLRYDPMDRLTAREA 414

Query: 421 LRHPFFTRDHLR 432
           LRHPFF +DH R
Sbjct: 415 LRHPFFAKDHRR 426

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147767048|emb|CAN67679.1| hypothetical protein VITISV_035275 [Vitis vinifera]

 Score =  781 bits (2018), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/435 (87%), Positives = 399/435 (91%), Gaps = 17/435 (3%)

Query: 1   MEM-ERVTEFPFSNLDRRPRKRARLGWDV-PQVPKAQVGLFCGQEVGNVTSFAPPRAPSD 58
           MEM ERVTEFP +++DRRPRKR RLGWDV PQ PKAQ+G+FCGQEVGNV SFAP +A SD
Sbjct: 1   MEMVERVTEFPHTHMDRRPRKRPRLGWDVLPQAPKAQLGMFCGQEVGNVASFAPSKAHSD 60

Query: 59  HVTSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWD 118
             T+SS+FVKGVARNGSPPWREDDKDGHY+FALGENLTSRYKI+SKMGEGTFGQVLECWD
Sbjct: 61  Q-TTSSMFVKGVARNGSPPWREDDKDGHYIFALGENLTSRYKINSKMGEGTFGQVLECWD 119

Query: 119 RERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE 178
           RERKEMVA+KIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE
Sbjct: 120 RERKEMVAVKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE 179

Query: 179 KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI 238
           KLG SLYDFLRKNNYRSFPIDLVREI RQLLEC+AFMHDL +IHTDLKPEN+LLVS EY+
Sbjct: 180 KLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECVAFMHDLRLIHTDLKPENILLVSPEYV 239

Query: 239 KVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL 298
           KVPDYK S  +PKD              VIDFGSTTYER DQNYIVSTRHYRAPEVILGL
Sbjct: 240 KVPDYKVSSRSPKD--------------VIDFGSTTYERQDQNYIVSTRHYRAPEVILGL 285

Query: 299 GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYV 358
           GW+YPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYV
Sbjct: 286 GWSYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYV 345

Query: 359 RRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 418
           RRGRLDWPEGA SRESIK+V+KLPRLQNLIMQHVDHSAGDL HLLQGLLRYDP+DRLTA 
Sbjct: 346 RRGRLDWPEGATSRESIKAVLKLPRLQNLIMQHVDHSAGDLIHLLQGLLRYDPSDRLTAJ 405

Query: 419 EALRHPFFTRDHLRR 433
            ALRHPFFTRDHLRR
Sbjct: 406 GALRHPFFTRDHLRR 420

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449469580|ref|XP_004152497.1| PREDICTED: serine/threonine-protein kinase AFC2-like [Cucumis sativus] gi|449487736|ref|XP_004157775.1| PREDICTED: serine/threonine-protein kinase AFC2-like [Cucumis sativus]

 Score =  779 bits (2012), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/434 (85%), Positives = 401/434 (92%), Gaps = 2/434 (0%)

Query: 1   MEMERVTEFPFSNLDRRPRKRARLGWDV-PQVPKAQVGLFCGQEVGNVTSFAPPRAPSDH 59
           MEMER+ EFP ++LDRRPRKRARLGWDV P+ PKAQVG+ CGQE+ N+ SFA  RAPSDH
Sbjct: 1   MEMERMIEFPHTHLDRRPRKRARLGWDVVPEAPKAQVGICCGQEIANIPSFASTRAPSDH 60

Query: 60  VTSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDR 119
            +S+ LFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDR
Sbjct: 61  -SSNPLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDR 119

Query: 120 ERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEK 179
           E+KEMVAIKIVRGI+KYR+AAMIEIEVLQQL KHDKGGNRCVQIRNWFDYRNHICIVFEK
Sbjct: 120 EKKEMVAIKIVRGIRKYRDAAMIEIEVLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEK 179

Query: 180 LGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIK 239
           LG SLYDFLRKNNYRSFPIDLVR+I RQLLEC+AFMHDL MIHTDLKPEN+LLVS +Y+K
Sbjct: 180 LGPSLYDFLRKNNYRSFPIDLVRDIGRQLLECVAFMHDLRMIHTDLKPENILLVSGDYVK 239

Query: 240 VPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLG 299
           V DYK+   +P+DSS FKR+PKSSAIKVIDFGSTTY+R DQNYIVSTRHYRAPEVILGLG
Sbjct: 240 VHDYKNLSRSPRDSSNFKRVPKSSAIKVIDFGSTTYDRQDQNYIVSTRHYRAPEVILGLG 299

Query: 300 WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVR 359
           W +PCDIWSVGCILVELC+GEALFQTHENLEHLAMMERVLGPLPQ MLK+VDRHAEKYVR
Sbjct: 300 WRFPCDIWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPQEMLKKVDRHAEKYVR 359

Query: 360 RGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE 419
           RGRLDWPEGA SR+SIK+V KL RL NLIMQHVDHS G+L HL+QGLLRYDP  RLTARE
Sbjct: 360 RGRLDWPEGATSRDSIKAVQKLARLPNLIMQHVDHSGGELIHLVQGLLRYDPLLRLTARE 419

Query: 420 ALRHPFFTRDHLRR 433
           ALRHPFFTRD LRR
Sbjct: 420 ALRHPFFTRDSLRR 433

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224121850|ref|XP_002318688.1| predicted protein [Populus trichocarpa] gi|222859361|gb|EEE96908.1| predicted protein [Populus trichocarpa]

 Score =  778 bits (2009), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/428 (86%), Positives = 395/428 (92%), Gaps = 6/428 (1%)

Query: 1   MEMERVTEFPFSNLDRRPRKRARLGWDVPQVPKAQVGLFCGQEVGNVTSFAPPRAPSDHV 60
           ME+E VT FP ++LDR PRKRAR  WDVPQ   AQVG+FCGQEVGNV S+A   A SDH 
Sbjct: 1   MELEHVTVFPITHLDR-PRKRARFAWDVPQ---AQVGIFCGQEVGNVASYASSGAISDH- 55

Query: 61  TSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRE 120
            +SSLFVKGVARNGSPPWREDDKDGHYMFALG+NLTSRYKIHSKMGEGTFGQVLECWDRE
Sbjct: 56  -TSSLFVKGVARNGSPPWREDDKDGHYMFALGDNLTSRYKIHSKMGEGTFGQVLECWDRE 114

Query: 121 RKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL 180
           RKEMVAIKIVRGIKKYREAAMIEIEVLQ L KHDKG NRCVQIRNWFDYRNHICIVFEKL
Sbjct: 115 RKEMVAIKIVRGIKKYREAAMIEIEVLQNLGKHDKGSNRCVQIRNWFDYRNHICIVFEKL 174

Query: 181 GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKV 240
           G SLYDFLRKNNYRSFPIDLVREI RQLLEC+AFMHDL MIHTDLKPEN+LLVSS+Y+KV
Sbjct: 175 GPSLYDFLRKNNYRSFPIDLVREIGRQLLECVAFMHDLRMIHTDLKPENILLVSSDYVKV 234

Query: 241 PDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGW 300
           PDYK+S  +PKD SY+KR+PKSSAIKVIDFGSTTYER DQNYIVSTRHYRAPEVILGLGW
Sbjct: 235 PDYKNSSRSPKDISYYKRVPKSSAIKVIDFGSTTYERQDQNYIVSTRHYRAPEVILGLGW 294

Query: 301 TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
           +YPCDIWS GCILVELCTGEALFQTHENLEHLAMMERVLGP+PQH+LKRVDRHA KYVRR
Sbjct: 295 SYPCDIWSAGCILVELCTGEALFQTHENLEHLAMMERVLGPMPQHILKRVDRHAGKYVRR 354

Query: 361 GRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA 420
           GRLDWPEGAASRES+K+V+KLPRLQNL+MQHVD SAGDL HLLQGLLRYDP DRLTAREA
Sbjct: 355 GRLDWPEGAASRESMKAVLKLPRLQNLVMQHVDQSAGDLIHLLQGLLRYDPLDRLTAREA 414

Query: 421 LRHPFFTR 428
           LRHPF  +
Sbjct: 415 LRHPFLAK 422

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356516617|ref|XP_003526990.1| PREDICTED: serine/threonine-protein kinase AFC2-like [Glycine max]

 Score =  775 bits (2000), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/433 (85%), Positives = 397/433 (91%), Gaps = 8/433 (1%)

Query: 1   MEMERVTEFPFSNLDRRPRKRARLGWDVPQVPKAQVGLFCGQEVGNVTSFAPPRAPSDHV 60
           MEMER+ EFP + +DR PRKRARLGWD+ +VPKAQVGLFCGQEV N++SFAP   P    
Sbjct: 1   MEMERIVEFPHTYMDRPPRKRARLGWDIAEVPKAQVGLFCGQEVENISSFAPSEHPP--- 57

Query: 61  TSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRE 120
             SSLF KGVARNGSPPWR+DDKDGHYMF LG+NLTSRYKIH KMGEGTFGQVLECWDRE
Sbjct: 58  --SSLF-KGVARNGSPPWRDDDKDGHYMFELGDNLTSRYKIHGKMGEGTFGQVLECWDRE 114

Query: 121 RKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL 180
           RKEMVAIKIVRGIKKYREAAM+EIEVLQQL KHDKG NRCVQIRNWFDYRNHICIVFEKL
Sbjct: 115 RKEMVAIKIVRGIKKYREAAMVEIEVLQQLGKHDKGSNRCVQIRNWFDYRNHICIVFEKL 174

Query: 181 GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKV 240
           G SLYDFLRKN+YRSFPIDLVREI  QLLEC+AFMHDL MIHTDLKPEN+LLVS EY+K+
Sbjct: 175 GPSLYDFLRKNSYRSFPIDLVREIGWQLLECVAFMHDLHMIHTDLKPENILLVSPEYLKI 234

Query: 241 PDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGW 300
           PDYKS+  +P  SS+FKR+PKSSAIKVIDFGSTTYER DQ YIVSTRHYRAPEVILGLGW
Sbjct: 235 PDYKSTTRSP--SSFFKRVPKSSAIKVIDFGSTTYEREDQTYIVSTRHYRAPEVILGLGW 292

Query: 301 TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
           +YPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGP+PQ MLKRVDRHAEKYVRR
Sbjct: 293 SYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPIPQQMLKRVDRHAEKYVRR 352

Query: 361 GRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA 420
           GRLDWPEGAASRESIK+VMKLPRLQN+IMQHVDHSAGDL HLLQGLLRYDP +RLTAR+A
Sbjct: 353 GRLDWPEGAASRESIKAVMKLPRLQNIIMQHVDHSAGDLIHLLQGLLRYDPFERLTARDA 412

Query: 421 LRHPFFTRDHLRR 433
           LRH FFTRD LRR
Sbjct: 413 LRHSFFTRDQLRR 425

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357461735|ref|XP_003601149.1| Serine/threonine protein kinase AFC2 [Medicago truncatula] gi|355490197|gb|AES71400.1| Serine/threonine protein kinase AFC2 [Medicago truncatula]

 Score =  773 bits (1997), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/433 (84%), Positives = 399/433 (92%), Gaps = 7/433 (1%)

Query: 1   MEMERVTEFPFSNLDRRPRKRARLGWDVPQVPKAQVGLFCGQEVGNVTSFAPPRAPSDHV 60
           MEMER+ EF  + +DR PRKRARLGWD+P+ PKAQVGLFCGQEV N++S+AP    S+H 
Sbjct: 1   MEMERMAEFSRNYMDRPPRKRARLGWDIPETPKAQVGLFCGQEVENISSYAP----SEHN 56

Query: 61  TSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRE 120
            +SSLF KGVARNGSPPWR+DDKDGHYMF LG+NLTSRY++H KMGEGTFGQVLECWDRE
Sbjct: 57  ITSSLF-KGVARNGSPPWRDDDKDGHYMFELGDNLTSRYRVHGKMGEGTFGQVLECWDRE 115

Query: 121 RKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL 180
           RKEMVAIK+VR IKKYREAAMIEIE+LQQL KHDKGGNRCVQIRNWFDYRNHICIVFEKL
Sbjct: 116 RKEMVAIKVVRAIKKYREAAMIEIEMLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEKL 175

Query: 181 GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKV 240
           G SLYDFLRKNNYRSFPIDLVREI RQLLEC+AFMHDL MIHTDLKPEN+LLVSSEY+K+
Sbjct: 176 GPSLYDFLRKNNYRSFPIDLVREIGRQLLECVAFMHDLHMIHTDLKPENILLVSSEYLKI 235

Query: 241 PDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGW 300
           PDYKSS   P   S++KR+PKSSAIKVIDFGSTTYER +QNYIVSTRHYRAPEVILGLGW
Sbjct: 236 PDYKSSSRAP--CSFYKRVPKSSAIKVIDFGSTTYERENQNYIVSTRHYRAPEVILGLGW 293

Query: 301 TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
           +YPCD+WSVGCILVELCTGEALFQTHENLEHLAMMERVLG LPQ +LKRVDRHAEKYVRR
Sbjct: 294 SYPCDVWSVGCILVELCTGEALFQTHENLEHLAMMERVLGLLPQQLLKRVDRHAEKYVRR 353

Query: 361 GRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA 420
           GRLDWPEGA SRESIK+VMKLPRLQNLIMQHVDHSAGDL HLLQGLLRYDP +R+TAR+A
Sbjct: 354 GRLDWPEGANSRESIKAVMKLPRLQNLIMQHVDHSAGDLIHLLQGLLRYDPFERVTARDA 413

Query: 421 LRHPFFTRDHLRR 433
           LRHPFF RDHLRR
Sbjct: 414 LRHPFFMRDHLRR 426

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	433
TAIR|locus:2121984	427	FC2 "FUS3-complementing gene 2	0.979	0.992	0.829	2.2e-199
TAIR|locus:2084006	467	FC1 "FUS3-complementing gene 1	0.983	0.912	0.705	2e-166
TAIR|locus:2125622	400	AME3 [Arabidopsis thaliana (ta	0.849	0.92	0.640	9.1e-132
POMBASE|SPAC1D4.11c	690	lkh1 "dual specificity protein	0.778	0.488	0.463	3.5e-86
UNIPROTKB|E1B9Q2	500	CLK2 "Uncharacterized protein"	0.775	0.672	0.472	8.9e-86
UNIPROTKB|F1P919	612	CLK2 "Uncharacterized protein"	0.775	0.549	0.472	8.9e-86
UNIPROTKB|B1AVT0	497	CLK2 "Dual-specificity protein	0.775	0.676	0.472	8.9e-86
UNIPROTKB|P49760	499	CLK2 "Dual specificity protein	0.775	0.673	0.472	8.9e-86
UNIPROTKB|F1RLJ5	500	CLK2 "Uncharacterized protein"	0.775	0.672	0.472	8.9e-86
MGI|MGI:1098669	499	Clk2 "CDC-like kinase 2" [Mus	0.771	0.669	0.475	1.1e-85

TAIR|locus:2121984 FC2 "FUS3-complementing gene 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1930 (684.5 bits), Expect = 2.2e-199, P = 2.2e-199
 Identities = 356/429 (82%), Positives = 397/429 (92%)

Query:     1 MEMERVTEFPFSNLDRRPRKRARLGWDV-PQVPKAQVGLFCGQEVGNVTSFAPPRAPSDH 59
             MEMERV EFP +++DRRPRKRARLGWDV PQ  KAQVG+FCGQE+GN++SFA   APSD+
Sbjct:     1 MEMERVHEFPHTHMDRRPRKRARLGWDVLPQATKAQVGMFCGQEIGNISSFASSGAPSDN 60

Query:    60 VTSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDR 119
               SSSL VKGVARNGSPPWREDDKDGHY+F LG++LT RYKI+SKMGEGTFGQVLECWDR
Sbjct:    61 --SSSLCVKGVARNGSPPWREDDKDGHYIFELGDDLTPRYKIYSKMGEGTFGQVLECWDR 118

Query:   120 ERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEK 179
             ERKEMVA+KIVRG+KKYREAAMIEIE+LQQL KHDKGGNRCVQIRNWFDYRNHICIVFEK
Sbjct:   119 ERKEMVAVKIVRGVKKYREAAMIEIEMLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEK 178

Query:   180 LGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIK 239
             LGSSLYDFLRKNNYRSFPIDLVREI  QLLEC+AFMHDL MIHTDLKPEN+LLVSS+Y+K
Sbjct:   179 LGSSLYDFLRKNNYRSFPIDLVREIGWQLLECVAFMHDLRMIHTDLKPENILLVSSDYVK 238

Query:   240 VPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLG 299
             +P+YK S    +D  Y KR+PKSSAIKVIDFGSTTYER DQ YIVSTRHYRAPEVILGLG
Sbjct:   239 IPEYKGS-RLQRDVCY-KRVPKSSAIKVIDFGSTTYERQDQTYIVSTRHYRAPEVILGLG 296

Query:   300 WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVR 359
             W+YPCD+WSVGCI+VELCTGEALFQTHENLEHLAMMERVLGP PQ MLK+VDRH+EKYVR
Sbjct:   297 WSYPCDVWSVGCIIVELCTGEALFQTHENLEHLAMMERVLGPFPQQMLKKVDRHSEKYVR 356

Query:   360 RGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTARE 419
             RGRLDWP+GA SR+S+K+V+KLPRLQNLIMQHVDHSAG+L +++QGLLR+DP++R+TARE
Sbjct:   357 RGRLDWPDGATSRDSLKAVLKLPRLQNLIMQHVDHSAGELINMVQGLLRFDPSERITARE 416

Query:   420 ALRHPFFTR 428
             ALRHPFF R
Sbjct:   417 ALRHPFFAR 425

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0004672 "protein kinase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0006397 "mRNA processing" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0045727 "positive regulation of translation" evidence=RCA

TAIR|locus:2084006 FC1 "FUS3-complementing gene 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1619 (575.0 bits), Expect = 2.0e-166, P = 2.0e-166
 Identities = 304/431 (70%), Positives = 348/431 (80%)

Query:     1 MEMERVTEFPFSNLDRRPRKRARLGWDV--PQVPKAQVGLFCGQEVGNVTSFAPPRAPSD 58
             +E +R  EFP   +D+RPRKR RL WD   P +P           +     FA    P+ 
Sbjct:    17 LETQRNVEFPHRIVDKRPRKRPRLTWDAAPPLLPPPPPPTVFQPPLYYGPEFASGLVPN- 75

Query:    59 HVTSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWD 118
                  ++F  G+ R GSPPWR DDKDGHY+F +G+ LT RY+I SKMGEGTFGQVLEC+D
Sbjct:    76 -FVYPNMFYNGLPRQGSPPWRPDDKDGHYVFVVGDTLTPRYQILSKMGEGTFGQVLECFD 134

Query:   119 RERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE 178
              + KE+VAIK++R I KYREAAMIEI+VLQ+L +HD GG+RCVQIRNWFDYRNHICIVFE
Sbjct:   135 NKNKEVVAIKVIRSINKYREAAMIEIDVLQRLTRHDVGGSRCVQIRNWFDYRNHICIVFE 194

Query:   179 KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI 238
             KLG SLYDFLRKN+YRSFPIDLVRE+ RQLLE +A+MHDL +IHTDLKPEN+LLVSSEYI
Sbjct:   195 KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAYMHDLRLIHTDLKPENILLVSSEYI 254

Query:   239 KVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL 298
             K+PDYK      KD SYFK +PKSSAIK+IDFGSTT+E  D NYIVSTRHYRAPEVILG+
Sbjct:   255 KIPDYKFLSRPTKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHNYIVSTRHYRAPEVILGV 314

Query:   299 GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYV 358
             GW YPCD+WS+GCILVELC+GEALFQTHENLEHLAMMERVLGPLP HM+ R DR +EKY 
Sbjct:   315 GWNYPCDLWSIGCILVELCSGEALFQTHENLEHLAMMERVLGPLPPHMVLRADRRSEKYF 374

Query:   359 RRG-RLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA 417
             RRG +LDWPEGA SR+S+K+V KLPRL NLIMQHVDHSAGDL  LLQGLLRYDPT+R  A
Sbjct:   375 RRGAKLDWPEGATSRDSLKAVWKLPRLPNLIMQHVDHSAGDLIDLLQGLLRYDPTERFKA 434

Query:   418 REALRHPFFTR 428
             REAL HPFFTR
Sbjct:   435 REALNHPFFTR 445

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005739 "mitochondrion" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0045727 "positive regulation of translation" evidence=RCA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2125622 AME3 [Arabidopsis thaliana (taxid:3702)]

 Score = 1292 (459.9 bits), Expect = 9.1e-132, P = 9.1e-132
 Identities = 241/376 (64%), Positives = 303/376 (80%)

Query:    55 APSDHVTSSSLFVKGVARNG---SPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFG 111
             AP++     ++ +KG   +G   SPP R+DD+DGHY+F+L +NLT RYKI SKMGEGTFG
Sbjct:    25 APAEPEAKRAV-IKGHGSDGRILSPPLRDDDRDGHYVFSLRDNLTPRYKILSKMGEGTFG 83

Query:   112 QVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN 171
             +VLECWDR+ KE VAIKI+R IKKYR+AAMIEI+VLQ+L K DKG  RCVQ++NWFDYRN
Sbjct:    84 RVLECWDRDTKEYVAIKIIRSIKKYRDAAMIEIDVLQKLVKSDKGRTRCVQMKNWFDYRN 143

Query:   172 HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVL 231
             HICIVFEKLG SL+DFL++N Y +FP+ LVR+   QLLE +A+MH+L ++HTDLKPEN+L
Sbjct:   144 HICIVFEKLGPSLFDFLKRNKYSAFPLALVRDFGCQLLESVAYMHELQLVHTDLKPENIL 203

Query:   232 LVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRA 291
             LVSSE +K+PD K S     + ++F+ +PKSSAIK+IDFGST  +    + IV TRHYR+
Sbjct:   204 LVSSENVKLPDNKRSA---ANETHFRCLPKSSAIKLIDFGSTVCDNRIHHSIVQTRHYRS 260

Query:   292 PEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVD 351
             PEVILGLGW+Y CD+WS+GCIL ELCTGEALFQTH+NLEHLAMMER LGPLP+HM ++  
Sbjct:   261 PEVILGLGWSYQCDLWSIGCILFELCTGEALFQTHDNLEHLAMMERALGPLPEHMTRKAS 320

Query:   352 RHAEKYVRRG-RLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD 410
             R AEKY RRG RL+WPEGA SRESI++V +L RL++++ +HVD++      LL GLL YD
Sbjct:   321 RGAEKYFRRGCRLNWPEGANSRESIRAVKRLDRLKDMVSKHVDNTRSRFADLLYGLLAYD 380

Query:   411 PTDRLTAREALRHPFF 426
             P++RLTA EAL HPFF
Sbjct:   381 PSERLTANEALDHPFF 396

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0045727 "positive regulation of translation" evidence=RCA

POMBASE|SPAC1D4.11c lkh1 "dual specificity protein kinase Lkh1" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 840 (300.8 bits), Expect = 3.5e-86, Sum P(2) = 3.5e-86
 Identities = 163/352 (46%), Positives = 237/352 (67%)

Query:    81 DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAA 140
             DD DGHY         +RY +   +G GTFG+V++C+D+      AIK+ R I KYREA+
Sbjct:   344 DDDDGHYKVVPNSKFANRYTVVRLLGHGTFGKVIQCYDQSTGRHCAIKVTRAIPKYREAS 403

Query:   141 MIEIEVLQQLAKHDKGG-NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPID 199
             +IE+ VLQ +A  D    N+C+Q+R++FDYR HICIV +  G S++DFL+ NNY  FP+ 
Sbjct:   404 LIELRVLQTIAHSDPTNENKCIQLRDYFDYRKHICIVTDLFGWSVFDFLKNNNYIPFPLK 463

Query:   200 LVREIARQLLECIAFMHDLCMIHTDLKPENVLLVS--SEYIKVPDYKSSLHTPKDSSYFK 257
              ++ +++QL + +AF+H L ++HTDLKPENVLLVS  S  I++P Y++         Y +
Sbjct:   464 HIQMLSQQLFKSVAFLHSLGLVHTDLKPENVLLVSNASRTIRLP-YRN---------YSQ 513

Query:   258 RMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 317
             ++  S  I++IDFGS T+E    + +VSTRHYRAPE+ILGLGW+YPCD+WS+GCILVEL 
Sbjct:   514 KVLNSCEIRLIDFGSATFEDEYHSSVVSTRHYRAPEIILGLGWSYPCDVWSIGCILVELF 573

Query:   318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR-GRLDWPEGAASRESIK 376
             TG+ALFQTHE+ EHL MME++LGP  ++M+ R  R ++++ +  G++ +P     ++SI 
Sbjct:   574 TGQALFQTHEDSEHLCMMEKILGPFDRNMISRSSRTSQRFFKSDGKVRYPLSNTPKKSIN 633

Query:   377 SVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
              +  L  L+ +        A  L  LL+ +  YDP  R+TA+EAL HPFFT+
Sbjct:   634 YLQSLQTLEQIFAVSSPEVAL-LLDLLKKVFVYDPKRRITAKEALWHPFFTQ 684

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IMP;IDA

GO:0006468 "protein phosphorylation" evidence=IC

GO:0010590 "regulation of cytokinetic cell separation" evidence=IMP

GO:0032955 "regulation of barrier septum assembly" evidence=IMP

GO:0034599 "cellular response to oxidative stress" evidence=IMP

GO:0035556 "intracellular signal transduction" evidence=TAS

GO:0048026 "positive regulation of mRNA splicing, via spliceosome" evidence=IMP

GO:0051519 "activation of bipolar cell growth" evidence=IMP

GO:0060237 "regulation of fungal-type cell wall organization" evidence=IMP

GO:0060257 "negative regulation of flocculation" evidence=IMP

GO:0060258 "negative regulation of filamentous growth" evidence=IMP

UNIPROTKB|E1B9Q2 CLK2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
 Identities = 166/351 (47%), Positives = 236/351 (67%)

Query:    80 EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKKYRE 138
             EDD +GH ++ +G+ L  RY+I S +GEGTFG+V++C D  R    VA+KI++ ++KY+E
Sbjct:   144 EDDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKE 203

Query:   139 AAMIEIEVLQQLAKHDKGG-NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFP 197
             AA +EI VL+++ + D    N CVQ+ +WFDY  H+CI FE LG S +DFL+ NNY  +P
Sbjct:   204 AARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYP 263

Query:   198 IDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK 257
             I  VR +A QL + + F+HD  + HTDLKPEN+L V+S+Y    +   +L   +D    +
Sbjct:   264 IHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDY----ELTYNLEKKRD----E 315

Query:   258 RMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 317
             R  KS+A++V+DFGS T++    + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E  
Sbjct:   316 RSVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYY 375

Query:   318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS 377
              G  LFQTH+N EHLAMMER+LGP+P  M+++  +  +KY  RGRLDW E  ++   ++ 
Sbjct:   376 VGFTLFQTHDNREHLAMMERILGPIPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVRE 433

Query:   378 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
               K P  + L  +  +H    L  L++ +L Y+P  RLT  EAL+HPFF R
Sbjct:   434 NCK-PLRRYLTSEAEEHH--QLFDLIESMLEYEPAKRLTLGEALQHPFFAR 481

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0045721 "negative regulation of gluconeogenesis" evidence=IEA

GO:0043484 "regulation of RNA splicing" evidence=IEA

GO:0032526 "response to retinoic acid" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0010212 "response to ionizing radiation" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1P919 CLK2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
 Identities = 166/351 (47%), Positives = 236/351 (67%)

Query:    80 EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKKYRE 138
             EDD +GH ++ +G+ L  RY+I S +GEGTFG+V++C D  R    VA+KI++ ++KY+E
Sbjct:   256 EDDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKE 315

Query:   139 AAMIEIEVLQQLAKHDKGG-NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFP 197
             AA +EI VL+++ + D    N CVQ+ +WFDY  H+CI FE LG S +DFL+ NNY  +P
Sbjct:   316 AARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYP 375

Query:   198 IDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK 257
             I  VR +A QL + + F+HD  + HTDLKPEN+L V+S+Y    +   +L   +D    +
Sbjct:   376 IHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDY----ELTYNLEKKRD----E 427

Query:   258 RMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 317
             R  KS+A++V+DFGS T++    + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E  
Sbjct:   428 RSVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYY 487

Query:   318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS 377
              G  LFQTH+N EHLAMMER+LGP+P  M+++  +  +KY  RGRLDW E  ++   ++ 
Sbjct:   488 VGFTLFQTHDNREHLAMMERILGPIPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVRE 545

Query:   378 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
               K P  + L  +  +H    L  L++ +L Y+P  RLT  EAL+HPFF R
Sbjct:   546 NCK-PLRRYLTSEAEEHH--QLFDLIESMLEYEPAKRLTLGEALQHPFFAR 593

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|B1AVT0 CLK2 "Dual-specificity protein kinase CLK2" [Homo sapiens (taxid:9606)]

 Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
 Identities = 166/351 (47%), Positives = 236/351 (67%)

Query:    80 EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKKYRE 138
             EDD +GH ++ +G+ L  RY+I S +GEGTFG+V++C D  R    VA+KI++ ++KY+E
Sbjct:   142 EDDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKE 201

Query:   139 AAMIEIEVLQQLAKHDKGG-NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFP 197
             AA +EI VL+++ + D    N CVQ+ +WFDY  H+CI FE LG S +DFL+ NNY  +P
Sbjct:   202 AARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYP 261

Query:   198 IDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK 257
             I  VR +A QL + + F+HD  + HTDLKPEN+L V+S+Y    +   +L   +D    +
Sbjct:   262 IHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDY----ELTYNLEKKRD----E 313

Query:   258 RMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 317
             R  KS+A++V+DFGS T++    + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E  
Sbjct:   314 RSVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYY 373

Query:   318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS 377
              G  LFQTH+N EHLAMMER+LGP+P  M+++  +  +KY  RGRLDW E  ++   ++ 
Sbjct:   374 VGFTLFQTHDNREHLAMMERILGPIPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVRE 431

Query:   378 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
               K P  + L  +  +H    L  L++ +L Y+P  RLT  EAL+HPFF R
Sbjct:   432 NCK-PLRRYLTSEAEEHH--QLFDLIESMLEYEPAKRLTLGEALQHPFFAR 479

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|P49760 CLK2 "Dual specificity protein kinase CLK2" [Homo sapiens (taxid:9606)]

 Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
 Identities = 166/351 (47%), Positives = 236/351 (67%)

Query:    80 EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKKYRE 138
             EDD +GH ++ +G+ L  RY+I S +GEGTFG+V++C D  R    VA+KI++ ++KY+E
Sbjct:   144 EDDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKE 203

Query:   139 AAMIEIEVLQQLAKHDKGG-NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFP 197
             AA +EI VL+++ + D    N CVQ+ +WFDY  H+CI FE LG S +DFL+ NNY  +P
Sbjct:   204 AARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYP 263

Query:   198 IDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK 257
             I  VR +A QL + + F+HD  + HTDLKPEN+L V+S+Y    +   +L   +D    +
Sbjct:   264 IHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDY----ELTYNLEKKRD----E 315

Query:   258 RMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 317
             R  KS+A++V+DFGS T++    + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E  
Sbjct:   316 RSVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYY 375

Query:   318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS 377
              G  LFQTH+N EHLAMMER+LGP+P  M+++  +  +KY  RGRLDW E  ++   ++ 
Sbjct:   376 VGFTLFQTHDNREHLAMMERILGPIPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVRE 433

Query:   378 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
               K P  + L  +  +H    L  L++ +L Y+P  RLT  EAL+HPFF R
Sbjct:   434 NCK-PLRRYLTSEAEEHH--QLFDLIESMLEYEPAKRLTLGEALQHPFFAR 481

GO:0005524 "ATP binding" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0032526 "response to retinoic acid" evidence=IEA

GO:0016607 "nuclear speck" evidence=IEA

GO:0043484 "regulation of RNA splicing" evidence=IDA

GO:0010212 "response to ionizing radiation" evidence=IMP

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0045721 "negative regulation of gluconeogenesis" evidence=ISS

GO:0046777 "protein autophosphorylation" evidence=ISS

UNIPROTKB|F1RLJ5 CLK2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
 Identities = 166/351 (47%), Positives = 236/351 (67%)

Query:    80 EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKKYRE 138
             EDD +GH ++ +G+ L  RY+I S +GEGTFG+V++C D  R    VA+KI++ ++KY+E
Sbjct:   144 EDDAEGHLIYHVGDWLQERYEIISTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKE 203

Query:   139 AAMIEIEVLQQLAKHDKGG-NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFP 197
             AA +EI VL+++ + D    N CVQ+ +WFDY  H+CI FE LG S +DFL+ NNY  +P
Sbjct:   204 AARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYP 263

Query:   198 IDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK 257
             I  VR +A QL + + F+HD  + HTDLKPEN+L V+S+Y    +   +L   +D    +
Sbjct:   264 IHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDY----ELTYNLEKKRD----E 315

Query:   258 RMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 317
             R  KS+A++V+DFGS T++    + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E  
Sbjct:   316 RSVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYY 375

Query:   318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS 377
              G  LFQTH+N EHLAMMER+LGP+P  M+++  +  +KY  RGRLDW E  ++   ++ 
Sbjct:   376 VGFTLFQTHDNREHLAMMERILGPIPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVRE 433

Query:   378 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
               K P  + L  +  +H    L  L++ +L Y+P  RLT  EAL+HPFF R
Sbjct:   434 NCK-PLRRYLTSEAEEHH--QLFDLIESMLEYEPAKRLTLGEALQHPFFAR 481

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0045721 "negative regulation of gluconeogenesis" evidence=IEA

GO:0043484 "regulation of RNA splicing" evidence=IEA

GO:0032526 "response to retinoic acid" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0010212 "response to ionizing radiation" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

MGI|MGI:1098669 Clk2 "CDC-like kinase 2" [Mus musculus (taxid:10090)]

 Score = 857 (306.7 bits), Expect = 1.1e-85, P = 1.1e-85
 Identities = 166/349 (47%), Positives = 235/349 (67%)

Query:    80 EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKKYRE 138
             EDD +GH ++ +G+ L  RY+I S +GEGTFG+V++C D  R    VA+KI++ ++KY+E
Sbjct:   143 EDDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGTQVALKIIKNVEKYKE 202

Query:   139 AAMIEIEVLQQLAKHDKGG-NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFP 197
             AA +EI VL+++ + D    N CVQ+ +WFDY  H+CI FE LG S +DFL+ NNY  +P
Sbjct:   203 AARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYP 262

Query:   198 IDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK 257
             I  VR +A QL + + F+HD  + HTDLKPEN+L V+S+Y    +   +L   +D    +
Sbjct:   263 IHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDY----ELTYNLEKKRD----E 314

Query:   258 RMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 317
             R  KS+A++V+DFGS T++    + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E  
Sbjct:   315 RSVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYY 374

Query:   318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS 377
              G  LFQTH+N EHLAMMER+LGP+P  M+++  +  +KY  RGRLDW E  ++   ++ 
Sbjct:   375 VGFTLFQTHDNREHLAMMERILGPVPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVRE 432

Query:   378 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
               K P  + L  +  DH    L  L++ +L Y+P  RLT  EAL+HPFF
Sbjct:   433 NCK-PLRRYLTSEAEDHH--QLFDLIENMLEYEPAKRLTLGEALQHPFF 478

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO;IDA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISO;IDA

GO:0010212 "response to ionizing radiation" evidence=ISO

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IDA

GO:0032526 "response to retinoic acid" evidence=IDA

GO:0042221 "response to chemical stimulus" evidence=IDA

GO:0043484 "regulation of RNA splicing" evidence=ISO

GO:0045721 "negative regulation of gluconeogenesis" evidence=IMP

GO:0046777 "protein autophosphorylation" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P51567	AFC2_ARATH	2, ., 7, ., 1, 2, ., 1	0.8298	0.9792	0.9929	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.12.1	0.994
3rd Layer	2.7.12	0.998
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_XV0599 hypothetical protein (428 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	433
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-73
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	6e-68
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-59
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	1e-55
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	3e-50
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	4e-49
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	9e-47
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	1e-44
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-44
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	1e-37
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	1e-37
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	2e-37
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	3e-37
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	4e-37
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	4e-37
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	1e-36
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	5e-35
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	5e-34
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	3e-33
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	4e-33
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	1e-32
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	7e-32
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-31
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	2e-31
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	6e-31
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	6e-31
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	2e-30
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	1e-29
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	4e-29
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	1e-28
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	2e-28
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	2e-28
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	6e-28
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	7e-28
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	1e-27
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	2e-27
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	3e-27
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	4e-27
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	9e-27
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	3e-26
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	4e-26
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	1e-25
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-25
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	2e-25
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	7e-25
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	9e-25
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	1e-24
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	1e-24
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	3e-24
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	7e-24
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	9e-24
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	1e-23
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	1e-23
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	3e-23
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	5e-23
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	2e-22
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	2e-22
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	2e-22
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	4e-22
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-21
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	1e-21
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	2e-21
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	3e-21
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	4e-21
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	7e-21
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	3e-19
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	4e-19
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	6e-19
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	2e-18
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	3e-18
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	5e-18
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	6e-18
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	3e-17
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	7e-17
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	2e-16
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	2e-16
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	3e-16
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	7e-16
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	1e-15
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	1e-15
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	1e-15
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	5e-15
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	5e-15
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	5e-15
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	6e-15
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	7e-15
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	7e-15
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	8e-15
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	1e-14
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	1e-14
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	1e-14
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	2e-14
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	3e-14
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	4e-14
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	4e-14
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	4e-14
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	4e-14
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	6e-14
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	7e-14
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	8e-14
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	1e-13
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	2e-13
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	2e-13
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-13
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	3e-13
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	4e-13
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	4e-13
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	6e-13
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	7e-13
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	9e-13
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	2e-12
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	2e-12
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	2e-12
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	4e-12
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	4e-12
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	4e-12
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	5e-12
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	7e-12
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	1e-11
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	1e-11
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-11
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	1e-11
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	1e-11
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	2e-11
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	2e-11
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	2e-11
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	3e-11
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	3e-11
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	3e-11
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	3e-11
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	4e-11
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	5e-11
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	6e-11
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	7e-11
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	8e-11
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	8e-11
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	1e-10
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	1e-10
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	1e-10
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	2e-10
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	2e-10
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	3e-10
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	3e-10
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	4e-10
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	4e-10
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	4e-10
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	5e-10
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	8e-10
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	8e-10
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	8e-10
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	9e-10
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	1e-09
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	1e-09
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	1e-09
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	2e-09
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	2e-09
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	2e-09
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	2e-09
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	3e-09
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	3e-09
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	3e-09
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	5e-09
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	5e-09
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	8e-09
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	8e-09
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	9e-09
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	9e-09
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	1e-08
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	1e-08
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	1e-08
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	2e-08
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	2e-08
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	4e-08
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	4e-08
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	4e-08
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	4e-08
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	4e-08
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	5e-08
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	5e-08
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	6e-08
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	6e-08
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	6e-08
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	7e-08
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	9e-08
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	1e-07
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	1e-07
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	1e-07
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	1e-07
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	2e-07
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	2e-07
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	2e-07
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	3e-07
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	3e-07
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	4e-07
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	5e-07
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	5e-07
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	5e-07
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	6e-07
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	6e-07
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	7e-07
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	7e-07
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	1e-06
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	1e-06
PLN03225	566	PLN03225, PLN03225, Serine/threonine-protein kinas	2e-06
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	2e-06
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	2e-06
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	2e-06
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	2e-06
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	2e-06
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	2e-06
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	2e-06
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	3e-06
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	5e-06
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	6e-06
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	6e-06
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	6e-06
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	6e-06
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	1e-05
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	1e-05
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	2e-05
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	2e-05
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	2e-05
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	3e-05
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	3e-05
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	3e-05
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	4e-05
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	5e-05
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	6e-05
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	8e-05
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	8e-05
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	8e-05
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	1e-04
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	2e-04
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	2e-04
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	3e-04
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	3e-04
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	4e-04
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	5e-04
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	6e-04
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	6e-04
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	7e-04
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	0.001
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	0.001
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	0.001
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	0.001
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	0.001
PLN03224	507	PLN03224, PLN03224, probable serine/threonine prot	0.003
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	0.003
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	0.003
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	0.003
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	0.004
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  230 bits (590), Expect = 1e-73
 Identities = 99/333 (29%), Positives = 148/333 (44%), Gaps = 84/333 (25%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDKG 156
           Y+I  K+GEG+FG+V    D++  ++VAIK+++   IKK RE  + EI++L++L KH   
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKL-KHPN- 58

Query: 157 GNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
               V++ + F+  + + +V E   G  L+D L+K        D  R   RQ+L  + ++
Sbjct: 59  ---IVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKR--GRLSEDEARFYLRQILSALEYL 113

Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H   ++H DLKPEN+LL    +                           +K+ DFG    
Sbjct: 114 HSKGIVHRDLKPENILLDEDGH---------------------------VKLADFGLARQ 146

Query: 276 ERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 333
             P +     V T  Y APEV+LG G+    DIWS+G IL EL TG+  F   + L    
Sbjct: 147 LDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLL--E 204

Query: 334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 393
           + +++  P P                      PE   S E+                   
Sbjct: 205 LFKKIGKPKPP------------------FPPPEWDISPEAK------------------ 228

Query: 394 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
                   L++ LL  DP  RLTA EAL+HPFF
Sbjct: 229 -------DLIRKLLVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score =  223 bits (569), Expect = 6e-68
 Identities = 129/354 (36%), Positives = 197/354 (55%), Gaps = 36/354 (10%)

Query: 83  KDGHYMFALGENL---TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA 139
           ++GH+   LGE++   T R+KI S +GEGTFG+V+E WDR+RKE  A+KIVR + KY   
Sbjct: 112 EEGHFYVVLGEDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRD 171

Query: 140 AMIEIEVLQQLAKHDKGGN-RCVQIRNWF-DYRNHICIVFEKLGSSLYDFLRKN---NYR 194
           A IEI+ ++++ + D       ++I+ +F +   H+CIV  K G  L D++ K+   ++R
Sbjct: 172 AKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKYGPCLLDWIMKHGPFSHR 231

Query: 195 SFPIDLVREIARQLLECIAFMH-DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS 253
                   +I  Q    + + H +L ++HTDLKPEN+L+ +S+   V D  ++   P   
Sbjct: 232 HLA-----QIIFQTGVALDYFHTELHLMHTDLKPENILMETSD--TVVDPVTNRALP--- 281

Query: 254 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 313
                 P    +++ D G    ER  +  IVSTRHYR+PEV+LGLGW Y  D+WS+GCI+
Sbjct: 282 ------PDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCII 335

Query: 314 VELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEK--YVRRGRLDWPEGAAS 371
            EL TG+ L+ TH+NLEHL +ME+ LG LP     R      +  Y   G+L        
Sbjct: 336 YELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQL---RPCTD 392

Query: 372 RESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 425
            + +  + +   ++ +I   +      L  L+ GLL YD   RL AR+   HP+
Sbjct: 393 PKHLARIARARPVREVIRDDL------LCDLIYGLLHYDRQKRLNARQMTTHPY 440

Length = 467

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  194 bits (496), Expect = 2e-59
 Identities = 89/336 (26%), Positives = 147/336 (43%), Gaps = 84/336 (25%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDK 155
           Y++  K+G G+FG V +   +   ++VA+KI++      K  + A  EI +L++L  H  
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRL-SHPN 59

Query: 156 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                V++ + F+ ++H+ +V E   G  L+D+L +        D  ++IA Q+L  + +
Sbjct: 60  I----VRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGG--PLSEDEAKKIALQILRGLEY 113

Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 273
           +H   +IH DLKPEN+LL  +  +K+                            DFG + 
Sbjct: 114 LHSNGIIHRDLKPENILLDENGVVKI---------------------------ADFGLAK 146

Query: 274 TYERPDQNY--IVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
              +   +    V T  Y APEV+L G G+    D+WS+G IL EL TG+  F     L+
Sbjct: 147 KLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILD 206

Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
            L ++ R+LGP                      D P+ ++  E                 
Sbjct: 207 QLQLIRRILGPPL------------------EFDEPKWSSGSE----------------- 231

Query: 391 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
                  +   L++  L  DP+ R TA E L+HP+F
Sbjct: 232 -------EAKDLIKKCLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score =  185 bits (471), Expect = 1e-55
 Identities = 104/340 (30%), Positives = 161/340 (47%), Gaps = 69/340 (20%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR--EAAMI--EIEVLQQLAKHD 154
           YK+  ++G+GTFG V    ++E  E+VAIK  +  KK+   E  M   E++ L++L +H 
Sbjct: 1   YKVIKQLGDGTFGSVYLARNKETGELVAIK--KMKKKFYSWEECMNLREVKSLRKLNEHP 58

Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                 V+++  F   + +  VFE +  +LY  ++    + F   ++R I  Q+L+ +A 
Sbjct: 59  N----IVKLKEVFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAH 114

Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--S 272
           +H     H DLKPEN LLVS   +                          +K+ DFG   
Sbjct: 115 IHKHGFFHRDLKPEN-LLVSGPEV--------------------------VKIADFGLAR 147

Query: 273 TTYERPDQNYIVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHENLE 330
               RP     VSTR YRAPE++L     Y  P DIW++GCI+ EL T   LF     ++
Sbjct: 148 EIRSRPPYTDYVSTRWYRAPEILLRSTS-YSSPVDIWALGCIMAELYTLRPLFPGSSEID 206

Query: 331 HLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGA--ASRESIKSVMKLPRL-QN 386
            L  +  VLG P  Q                   DWPEG   AS+       + P+    
Sbjct: 207 QLYKICSVLGTPTKQ-------------------DWPEGYKLASKLGF----RFPQFAPT 243

Query: 387 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
            + Q + +++ +   L++ +LR+DP  R TA +AL+HP+F
Sbjct: 244 SLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score =  171 bits (435), Expect = 3e-50
 Identities = 97/350 (27%), Positives = 157/350 (44%), Gaps = 90/350 (25%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMIEIEVLQQLAK 152
           Y+   K+GEGT+G V +  D++  E+VA+K +R      GI      A+ EI +L++L K
Sbjct: 1   YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPS---TALREISLLKEL-K 56

Query: 153 HDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
           H    N  V++ +       + +VFE     L  +L          +L++ I  QLL  +
Sbjct: 57  HP---N-IVKLLDVIHTERKLYLVFEYCDMDLKKYL-DKRPGPLSPNLIKSIMYQLLRGL 111

Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG- 271
           A+ H   ++H DLKP+N +L++ + +                          +K+ DFG 
Sbjct: 112 AYCHSHRILHRDLKPQN-ILINRDGV--------------------------LKLADFGL 144

Query: 272 STTYERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 328
           +  +  P + Y   V T  YRAPE++LG   ++   DIWSVGCI  E+ TG+ LF     
Sbjct: 145 ARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSE 204

Query: 329 LEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           ++ L  + ++LG P  +                    WP           V KLP  +  
Sbjct: 205 IDQLFKIFQILGTPTEE-------------------SWPG----------VTKLPDYKPT 235

Query: 388 IMQH-----------VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             +            +D    D   LL  +L+Y+P  R++A+EAL+HP+F
Sbjct: 236 FPKFPPKDLEKVLPRLDPEGID---LLSKMLQYNPAKRISAKEALKHPYF 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score =  168 bits (428), Expect = 4e-49
 Identities = 100/337 (29%), Positives = 164/337 (48%), Gaps = 58/337 (17%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK---IVRGIKKYREAAMIEIEVLQQLAKHD 154
           +Y++   +GEG +G VL+C ++   E+VAIK        +  ++ A+ E++VL+QL +H+
Sbjct: 2   KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQL-RHE 60

Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                 V ++  F  +  + +VFE +  +L + L  +     P D VR    QLL+ IA+
Sbjct: 61  N----IVNLKEAFRRKGRLYLVFEYVERTLLELLEASPG-GLPPDAVRSYIWQLLQAIAY 115

Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN +LVS                          +S  +K+ DFG   
Sbjct: 116 CHSHNIIHRDIKPEN-ILVS--------------------------ESGVLKLCDFGFAR 148

Query: 275 Y--ERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENL 329
               RP       V+TR YRAPE+++G   +  P D+W++GCI+ EL  GE LF    ++
Sbjct: 149 ALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDI 208

Query: 330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM 389
           + L ++++ LGPLP    +    +     R   + +PE  +  ES++      R    + 
Sbjct: 209 DQLYLIQKCLGPLPPSHQELFSSNP----RFAGVAFPE-PSQPESLER-----RYPGKV- 257

Query: 390 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
                 +      L+  LR DP +RLT  E L+HP+F
Sbjct: 258 ------SSPALDFLKACLRMDPKERLTCDELLQHPYF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score =  162 bits (411), Expect = 9e-47
 Identities = 100/343 (29%), Positives = 153/343 (44%), Gaps = 75/343 (21%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMIEIEVLQQLAK 152
           Y+   K+GEGT+G V +  D+   E+VAIK ++      GI K    A+ EI++L++L  
Sbjct: 1   YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPK---TALREIKLLKEL-N 56

Query: 153 HDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
           H       +++ + F ++  + +VFE + + LY  ++    R  P  L++    QLL+ +
Sbjct: 57  HPN----IIKLLDVFRHKGDLYLVFEFMDTDLYKLIKDRQ-RGLPESLIKSYLYQLLQGL 111

Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
           AF H   ++H DLKPEN+L+                                +K+ DFG 
Sbjct: 112 AFCHSHGILHRDLKPENLLI---------------------------NTEGVLKLADFGL 144

Query: 273 TTYERPDQNYI---VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN 328
                         V TR YRAPE++LG  G++ P DIWSVGCI  EL +   LF     
Sbjct: 145 ARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSE 204

Query: 329 LEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGA----ASRESIKSVMKLPR 383
           ++ L  + R LG P P+                    WP+        + S      +P 
Sbjct: 205 IDQLFKIFRTLGTPDPEV-------------------WPKFTSLARNYKFSFPKKAGMP- 244

Query: 384 LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
               +  +    A D   LL  +L YDP  R+TA +AL HP+F
Sbjct: 245 -LPKLFPNASPQALD---LLSQMLHYDPHKRITAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score =  156 bits (396), Expect = 1e-44
 Identities = 100/346 (28%), Positives = 153/346 (44%), Gaps = 76/346 (21%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK---IVRGIKKYREAAMIEIEVLQQLAKHD 154
           RYKI  ++GEG  G V +  DRE  E VA+K   + R        A+ EI+ LQ   +H 
Sbjct: 1   RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQAC-QHP 59

Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                 V++ + F + +   +V E + S L + LR +  R  P   V+   R LL+ +A+
Sbjct: 60  ----YVVKLLDVFPHGSGFVLVMEYMPSDLSEVLR-DEERPLPEAQVKSYMRMLLKGVAY 114

Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDFGS 272
           MH   ++H DLKP N+L+ +   +K+ D+  +      +   Y  +              
Sbjct: 115 MHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQ-------------- 160

Query: 273 TTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEH 331
                      V+TR YRAPE++ G   +    D+W+VGCI  EL  G  LF    ++E 
Sbjct: 161 -----------VATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQ 209

Query: 332 LAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM- 389
           LA++ R LG P  +                    WP           +  LP    +   
Sbjct: 210 LAIVFRTLGTPNEE-------------------TWPG----------LTSLPDYNKITFP 240

Query: 390 --------QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
                   +    ++ +   LL+GLL YDP+ RL+A EALRHP+FT
Sbjct: 241 ESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  153 bits (389), Expect = 2e-44
 Identities = 73/218 (33%), Positives = 106/218 (48%), Gaps = 39/218 (17%)

Query: 106 GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           GEG FG V    D++  + VAIKI++        E  + EIE+L++L  H       V++
Sbjct: 2   GEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKL-NHP----NIVKL 56

Query: 164 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
              F+  NH+ +V E   G SL D L++N  +    D +  I  Q+LE + ++H   +IH
Sbjct: 57  YGVFEDENHLYLVMEYCEGGSLKDLLKENEGK-LSEDEILRILLQILEGLEYLHSNGIIH 115

Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
            DLKPEN+LL S                              +K+ DFG +     D++ 
Sbjct: 116 RDLKPENILLDSDNGK--------------------------VKLADFGLSKLLTSDKSL 149

Query: 283 ---IVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVEL 316
              IV T  Y APEV+LG G ++   DIWS+G IL EL
Sbjct: 150 LKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score =  137 bits (348), Expect = 1e-37
 Identities = 90/343 (26%), Positives = 148/343 (43%), Gaps = 71/343 (20%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMI-EIEVLQQLA 151
           Y+  +++GEG +G V +  D      VA+K VR      GI      + + EI +L+QL 
Sbjct: 1   YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIP----LSTLREIALLKQLE 56

Query: 152 KHDKGGNRCVQIR----NWFDYRN-HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIAR 206
             +      V++          R   + +VFE +   L  +L K      P + ++++ R
Sbjct: 57  SFEH--PNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMR 114

Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           QLL  + F+H   ++H DLKP+N+L+ S   +K+ D+  +                   +
Sbjct: 115 QLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLA-------------------R 155

Query: 267 VIDFGS--TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
           +  F    T+        +V T  YRAPEV+L   +  P D+WSVGCI  EL     LF+
Sbjct: 156 IYSFEMALTS--------VVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFR 207

Query: 325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPR 383
                + L  +  V+G   +                   +WP   +  R S  S    PR
Sbjct: 208 GTSEADQLDKIFDVIGLPSEE------------------EWPRNVSLPRSSFPS--YTPR 247

Query: 384 LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
                +  +     D   LL+ +L ++P  R++A EAL+HP+F
Sbjct: 248 SFKSFVPEICEEGLD---LLKKMLTFNPHKRISAFEALQHPYF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score =  137 bits (348), Expect = 1e-37
 Identities = 100/343 (29%), Positives = 169/343 (49%), Gaps = 72/343 (20%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK---------IVRGIKKYREAAMIEIEVLQ 148
           +Y+  SK+GEG++G V +C +RE  ++VAIK         +++ I      A+ EI +L+
Sbjct: 2   KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKI------ALREIRMLK 55

Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQL 208
           QL KH       V +   F  +  + +VFE    ++ + L KN  R  P  L+++I  Q 
Sbjct: 56  QL-KH----PNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNP-RGVPEHLIKKIIWQT 109

Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
           L+ + F H    IH D+KPEN+L+                            K   IK+ 
Sbjct: 110 LQAVNFCHKHNCIHRDVKPENILIT---------------------------KQGQIKLC 142

Query: 269 DFG-STTYERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQ 324
           DFG +     P  +Y   V+TR YRAPE+++G   +  P D+W++GC+  EL TG+ L+ 
Sbjct: 143 DFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWP 202

Query: 325 THENLEHLAMMERVLGPL-PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              +++ L ++ + LG L P+H  +++     ++ +   +  PE   +RE ++   K P 
Sbjct: 203 GKSDVDQLYLIRKTLGDLIPRH--QQIFS-TNQFFKGLSIPEPE---TREPLE--SKFPN 254

Query: 384 LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
           + +  +             L+G L+ DPT+RL+  E L HP+F
Sbjct: 255 ISSPALS-----------FLKGCLQMDPTERLSCEELLEHPYF 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score =  138 bits (350), Expect = 2e-37
 Identities = 96/355 (27%), Positives = 153/355 (43%), Gaps = 81/355 (22%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREAAMI--EIEVLQQLAKHD 154
           RY++   +G G +G V    D+     VAIK I        +A  I  EI++L+ L +H+
Sbjct: 1   RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHL-RHE 59

Query: 155 KGGNRCVQIRNWF-----DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIAR--- 206
              N  + + +       +  N + IV E + + L+  ++       P  L  +  +   
Sbjct: 60  ---N-IIGLLDILRPPSPEDFNDVYIVTELMETDLHKVIKS------PQPLTDDHIQYFL 109

Query: 207 -QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 265
            Q+L  + ++H   +IH DLKP N+L+ S+                             +
Sbjct: 110 YQILRGLKYLHSANVIHRDLKPSNILVNSN---------------------------CDL 142

Query: 266 KVIDFG----STTYERPDQN---YIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELC 317
           K+ DFG        E        Y+V TR YRAPE++L    +T   DIWSVGCI  EL 
Sbjct: 143 KICDFGLARGVDPDEDEKGFLTEYVV-TRWYRAPELLLSSSRYTKAIDIWSVGCIFAELL 201

Query: 318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS 377
           T + LF   + ++ L ++  VLG   +  LK +                    +R  +KS
Sbjct: 202 TRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFI----------------TSEKARNYLKS 245

Query: 378 VMKLPRLQNL--IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           + K P+ + L  +       A D   LL+ +L +DP  R+TA EAL HP+  + H
Sbjct: 246 LPKKPK-KPLSKLFPGASPEAID---LLEKMLVFDPKKRITADEALAHPYLAQLH 296

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score =  137 bits (346), Expect = 3e-37
 Identities = 101/336 (30%), Positives = 154/336 (45%), Gaps = 62/336 (18%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI----EIEVLQQLAKHD 154
           YKI  K+GEGTF +VL+   R+  +  AIK     K ++    +    EI+ L++L+ H 
Sbjct: 1   YKILGKIGEGTFSEVLKAQSRKTGKYYAIK--CMKKHFKSLEQVNNLREIQALRRLSPH- 57

Query: 155 KGGNRCVQIRNWFDYR-NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
              N    I   FD +   + +VFE +  +LY+ + K   R  P   V+    QLL+ + 
Sbjct: 58  --PNILRLIEVLFDRKTGRLALVFELMDMNLYELI-KGRKRPLPEKRVKSYMYQLLKSLD 114

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS- 272
            MH   + H D+KPEN+L+                            K   +K+ DFGS 
Sbjct: 115 HMHRNGIFHRDIKPENILI----------------------------KDDILKLADFGSC 146

Query: 273 -TTYERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLE 330
              Y +P     +STR YRAPE +L  G +    DIW+VGC+  E+ +   LF     L+
Sbjct: 147 RGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD 206

Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
            +A +  VLG     +LK+  +           ++P         K    L +L    + 
Sbjct: 207 QIAKIHDVLGTPDAEVLKKFRKSRHM-----NYNFPS--------KKGTGLRKL----LP 249

Query: 391 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
           +      D   LL+ LL YDP +R+TA++ALRHP+F
Sbjct: 250 NASAEGLD---LLKKLLAYDPDERITAKQALRHPYF 282

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score =  136 bits (346), Expect = 4e-37
 Identities = 90/341 (26%), Positives = 153/341 (44%), Gaps = 66/341 (19%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA------AMIEIEVLQQLA 151
           RY+   K+GEGT+  V +  D+E   +VAIK ++  ++          A+ EI++LQ+L 
Sbjct: 1   RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQEL- 59

Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
           KH       + + + F ++++I +VFE + + L   ++  +    P D ++      L  
Sbjct: 60  KHPN----IIGLLDVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPAD-IKSYMLMTLRG 114

Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           + ++H   ++H DLKP N LL++S+ +                          +K+ DFG
Sbjct: 115 LEYLHSNWILHRDLKPNN-LLIASDGV--------------------------LKLADFG 147

Query: 272 -STTYERPDQNYI--VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHE 327
            + ++  P++     V TR YRAPE++ G   +    D+WSVGCI  EL           
Sbjct: 148 LARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDS 207

Query: 328 NLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 386
           +++ L  +   LG P  +                   +WP G  S          P    
Sbjct: 208 DIDQLGKIFEALGTPTEE-------------------NWP-GVTSLPDYVEFKPFPPTP- 246

Query: 387 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
            + Q    ++ D   LLQ LL  +P  R+TAR+AL HP+F+
Sbjct: 247 -LKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFS 286

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score =  138 bits (349), Expect = 4e-37
 Identities = 103/357 (28%), Positives = 156/357 (43%), Gaps = 76/357 (21%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--------KKYREAAMIEI 144
           +++  +Y+I  K+G+G +G V +  DR  KE+VA+K +           + +RE     I
Sbjct: 3   KHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFRE-----I 57

Query: 145 EVLQQLAKHDKGGNRCVQIRNWFDYRNH--ICIVFEKLGSSLYDFLRKNNYRSFPIDLVR 202
             LQ+L  H       V++ N     N   I +VFE + + L+  +R N          R
Sbjct: 58  MFLQELGDHPN----IVKLLNVIKAENDKDIYLVFEYMETDLHAVIRANILED---VHKR 110

Query: 203 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 262
            I  QLL+ + ++H   +IH DLKP N+LL                   +S         
Sbjct: 111 YIMYQLLKALKYIHSGNVIHRDLKPSNILL-------------------NSDCR------ 145

Query: 263 SAIKVIDFG--------STTYERPDQNYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCIL 313
             +K+ DFG            E P     V+TR YRAPE++LG    T   D+WSVGCIL
Sbjct: 146 --VKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCIL 203

Query: 314 VELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRE 373
            E+  G+ LF     L  L  +  V+GP     ++ +               P  A   +
Sbjct: 204 GEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKS-------------PFAATMLD 250

Query: 374 SIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           S+ S  + P  +  ++      A D   LL+ LL ++P  RLTA EAL HP+  + H
Sbjct: 251 SLPSRPRKPLDE--LLPKASDDALD---LLKKLLVFNPNKRLTAEEALEHPYVAQFH 302

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score =  135 bits (342), Expect = 1e-36
 Identities = 94/358 (26%), Positives = 149/358 (41%), Gaps = 101/358 (28%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYRE----AAMIEIEVLQQLAKHD 154
           Y+  +++GEGT+GQV +  +++  E+VA+K +R ++  +E     A+ EI++LQ+L +H 
Sbjct: 1   YEKIAQIGEGTYGQVYKARNKKTGELVALKKIR-MENEKEGFPITAIREIKLLQKL-RHP 58

Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKLGSSLY--------DF---LRKNNYRSFPIDLVRE 203
                 V++           IV  K   S+Y        D    L     + F    ++ 
Sbjct: 59  N----IVRL---------KEIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVK-FTESQIKC 104

Query: 204 IARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSS 263
             +QLLE + ++H   ++H D+K  N+L+         +    L                
Sbjct: 105 YMKQLLEGLQYLHSNGILHRDIKGSNILI---------NNDGVL---------------- 139

Query: 264 AIKVIDFG-STTYE---RPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCT 318
             K+ DFG +  Y      D    V T  YR PE++LG   +    D+WSVGCIL EL  
Sbjct: 140 --KLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFL 197

Query: 319 GEALFQTHENLEHLAMMERVLGP----------LPQHMLKRVDRHAEKYVRRGRLDWPEG 368
           G+ +FQ    LE L  +  + G                     +  + Y RR        
Sbjct: 198 GKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWF--ENLKPKKPYKRR-------- 247

Query: 369 AASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
              RE  K ++             D SA D   LL  LL  DP  R++A +AL+H +F
Sbjct: 248 --LREFFKHLI-------------DPSALD---LLDKLLTLDPKKRISADQALQHEYF 287

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score =  130 bits (329), Expect = 5e-35
 Identities = 94/335 (28%), Positives = 163/335 (48%), Gaps = 53/335 (15%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKH 153
           +++++   +GEG +G VL+C  +E KE+VAIK  +     ++ +E  + E+++L+ L + 
Sbjct: 1   NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQE 60

Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
           +      V+++  F  R  + +VFE +  ++ + L +      P + VR    QL++ I 
Sbjct: 61  N-----IVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPP-EKVRSYIYQLIKAIH 114

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           + H   ++H D+KPEN+L+  ++ +K+ D+                          F   
Sbjct: 115 WCHKNDIVHRDIKPENLLISHNDVLKLCDF-------------------------GFARN 149

Query: 274 TYERPDQNYI--VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 331
             E  + NY   V+TR YR+PE++LG  +    D+WSVGCIL EL  G+ LF     ++ 
Sbjct: 150 LSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQ 209

Query: 332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH 391
           L  +++VLGPLP   +K    +     R   L +P       ++     L R    I+  
Sbjct: 210 LFTIQKVLGPLPAEQMKLFYSNP----RFHGLRFP-------AVNHPQSLERRYLGILS- 257

Query: 392 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
                G L  L++ LL+ +PTDR    + L HP F
Sbjct: 258 -----GVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score =  129 bits (325), Expect = 5e-34
 Identities = 92/348 (26%), Positives = 139/348 (39%), Gaps = 93/348 (26%)

Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI----EIEVLQQLAKHDKGGNR 159
           ++GEGT+G V    D    E+VA+K VR +   R+   I    EI +L  L +H      
Sbjct: 14  RIGEGTYGIVYRARDTTSGEIVALKKVR-MDNERDGIPISSLREITLLLNL-RHPN---- 67

Query: 160 CVQIRNWF--DYRNHICIVFE----KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
            V+++      + + I +V E     L S L      N    F    V+ +  QLL  + 
Sbjct: 68  IVELKEVVVGKHLDSIFLVMEYCEQDLASLLD-----NMPTPFSESQVKCLMLQLLRGLQ 122

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-S 272
           ++H+  +IH DLK  N+L                           +     +K+ DFG +
Sbjct: 123 YLHENFIIHRDLKVSNLL---------------------------LTDKGCLKIADFGLA 155

Query: 273 TTYERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENL 329
            TY  P +     V T  YRAPE++LG   +T   D+W+VGCIL EL   + L      +
Sbjct: 156 RTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEI 215

Query: 330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM 389
           E L ++ ++LG   + +                  WP              LP +    +
Sbjct: 216 EQLDLIIQLLGTPNESI------------------WP----------GFSDLPLVGKFTL 247

Query: 390 QHVDHSAGDLTH-----------LLQGLLRYDPTDRLTAREALRHPFF 426
               ++  +L H           LL  LL YDP  R TA EAL   +F
Sbjct: 248 PKQPYN--NLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYF 293

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  128 bits (322), Expect = 3e-33
 Identities = 88/345 (25%), Positives = 138/345 (40%), Gaps = 71/345 (20%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREAAMIEIEVLQQLAKHD 154
           Y+I  K+GEG+FG+V    DR+    VA+K++        K  E  + EI++L  L    
Sbjct: 2   YRILRKLGEGSFGEVYLARDRKL---VALKVLAKKLESKSKEVERFLREIQILASLNHP- 57

Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYR-SFPIDLVREIARQLLECI 212
                 V++ ++F     + +V E + G SL D L+K   +          I  Q+L  +
Sbjct: 58  ---PNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSAL 114

Query: 213 AFMHDLCMIHTDLKPENVLLVSSEY-IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
            ++H   +IH D+KPEN+LL      +K+ D+                    A  + D G
Sbjct: 115 EYLHSKGIIHRDIKPENILLDRDGRVVKLIDF------------------GLAKLLPDPG 156

Query: 272 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPC---DIWSVGCILVELCTGEALFQTHEN 328
           ST+      +  V T  Y APEV+LGL   Y     DIWS+G  L EL TG   F+  +N
Sbjct: 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKN 216

Query: 329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 388
               +   +++  LP   L                                       L 
Sbjct: 217 SSATSQTLKIILELPTPSLA------------------------------------SPLS 240

Query: 389 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 433
             + +  +   + LL+ LL  DP +RL++   L H       L+ 
Sbjct: 241 PSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKE 285

Length = 384

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score =  125 bits (317), Expect = 4e-33
 Identities = 91/342 (26%), Positives = 151/342 (44%), Gaps = 69/342 (20%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVLQQLAKHD 154
           Y+  +++ EGT+G V    D++  E+VA+K ++ ++K +E     ++ EI +L +L +H 
Sbjct: 7   YEKLNRIEEGTYGVVYRARDKKTGEIVALKKLK-MEKEKEGFPITSLREINILLKL-QHP 64

Query: 155 KGGNRCVQIRNWF--DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
                 V ++        + I +V E +   L   + +   + F    V+ +  QLL  +
Sbjct: 65  N----IVTVKEVVVGSNLDKIYMVMEYVEHDLKSLM-ETMKQPFLQSEVKCLMLQLLSGV 119

Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG- 271
           A +HD  ++H DLK  N+L                           +     +K+ DFG 
Sbjct: 120 AHLHDNWILHRDLKTSNLL---------------------------LNNRGILKICDFGL 152

Query: 272 STTYERPDQNY--IVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHEN 328
           +  Y  P + Y  +V T  YRAPE++LG   ++   D+WSVGCI  EL T + LF     
Sbjct: 153 AREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSE 212

Query: 329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 388
           ++ L  + ++LG  P           EK        WP G +     K         N +
Sbjct: 213 IDQLNKIFKLLG-TPT----------EK-------IWP-GFSELPGAKKKTFTKYPYNQL 253

Query: 389 MQHVDHSAGDLTH----LLQGLLRYDPTDRLTAREALRHPFF 426
            +        L+     LL  LL YDP  R++A +AL+HP+F
Sbjct: 254 RKKFPA--LSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score =  124 bits (313), Expect = 1e-32
 Identities = 100/335 (29%), Positives = 156/335 (46%), Gaps = 69/335 (20%)

Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMIEIEVLQQLAKHDKGG 157
           K+GEGT+G V +  ++   E+VA+K +R      G+      A+ EI +L++L  H    
Sbjct: 7   KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVP---STAIREISLLKEL-NHPN-- 60

Query: 158 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
              V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H 
Sbjct: 61  --IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHS 118

Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYE 276
             ++H DLKP+N LL+++E                           AIK+ DFG +  + 
Sbjct: 119 HRVLHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFG 151

Query: 277 RPDQNYI--VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 333
            P + Y   V T  YRAPE++LG   ++   DIWS+GCI  E+ T  ALF     ++ L 
Sbjct: 152 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 211

Query: 334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL--IMQH 391
            + R LG  P  ++                 WP   +  +   S  K  R Q+   ++  
Sbjct: 212 RIFRTLGT-PDEVV-----------------WPGVTSLPDYKPSFPKWAR-QDFSKVVPP 252

Query: 392 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
           +D    D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 253 LDEDGRD---LLSQMLHYDPNKRISAKAALAHPFF 284

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score =  122 bits (307), Expect = 7e-32
 Identities = 90/333 (27%), Positives = 152/333 (45%), Gaps = 55/333 (16%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDKG 156
           +K   K+GEGT+  V +  +R   E+VA+K +     +     A+ EI ++++L KH+  
Sbjct: 2   FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKEL-KHEN- 59

Query: 157 GNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKN-NYRSFPIDLVREIARQLLECIAFM 215
               V++ +     N + +VFE +   L  ++  +    +   + V+    QLL+ IAF 
Sbjct: 60  ---IVRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFC 116

Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H+  ++H DLKP+N+L+     +K+ D+               + ++  I V  F +   
Sbjct: 117 HENRVLHRDLKPQNLLINKRGELKLADFG--------------LARAFGIPVNTFSNE-- 160

Query: 276 ERPDQNYIVSTRHYRAPEVILGLGWTYPC--DIWSVGCILVELCTGEALFQTHENLEHLA 333
                   V T  YRAP+V+LG   TY    DIWSVGCI+ E+ TG  LF    N + L 
Sbjct: 161 --------VVTLWYRAPDVLLG-SRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLL 211

Query: 334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 393
            + R++G   +     + +  E      +  +P                 LQ L      
Sbjct: 212 KIFRIMGTPTESTWPGISQLPEY-----KPTFPRYPPQ-----------DLQQLF----P 251

Query: 394 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
           H+      LL  LL+ +P  R++A +AL+HP+F
Sbjct: 252 HADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  120 bits (304), Expect = 1e-31
 Identities = 82/331 (24%), Positives = 137/331 (41%), Gaps = 83/331 (25%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHDKGG 157
           ++I  K+G+G FG+V +   +   + VAIK+++   K+ +E  + EI++L++  KH    
Sbjct: 2   FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKC-KH---P 57

Query: 158 NRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 216
           N  V+    +  ++ + IV E   G SL D L K+  ++     +  + ++LL+ + ++H
Sbjct: 58  N-IVKYYGSYLKKDELWIVMEFCSGGSLKDLL-KSTNQTLTESQIAYVCKELLKGLEYLH 115

Query: 217 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTY 275
              +IH D+K  N+LL S                              +K+IDFG S   
Sbjct: 116 SNGIIHRDIKAANILLTS---------------------------DGEVKLIDFGLSAQL 148

Query: 276 E-RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                +N +V T ++ APEVI G  + Y  DIWS+G   +EL  G+  +   E     A+
Sbjct: 149 SDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPY--SELPPMKAL 206

Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
            +      P                   L  PE   S E                     
Sbjct: 207 FKIATNGPP------------------GLRNPE-KWSDE--------------------- 226

Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPF 425
                   L+  L+ +P  R TA + L+HPF
Sbjct: 227 ----FKDFLKKCLQKNPEKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score =  120 bits (304), Expect = 2e-31
 Identities = 99/342 (28%), Positives = 164/342 (47%), Gaps = 70/342 (20%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---RGIKKYREAAMIEIEVLQQLAKHD 154
           +Y+    +GEG++G V++C  +E  ++VAIK        K  ++ AM EI +L+QL +H+
Sbjct: 2   KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQL-RHE 60

Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDL----VREIARQLLE 210
                 V +   F  +  + +VFE +  ++ D L K     +P  L    VR+   Q+L 
Sbjct: 61  N----LVNLIEVFRRKKRLYLVFEFVDHTVLDDLEK-----YPNGLDESRVRKYLFQILR 111

Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            I F H   +IH D+KPEN+L VS                          +S  +K+ DF
Sbjct: 112 GIEFCHSHNIIHRDIKPENIL-VS--------------------------QSGVVKLCDF 144

Query: 271 G-STTYERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTH 326
           G + T   P + Y   V+TR YRAPE+++G   +    DIW+VGC++ E+ TGE LF   
Sbjct: 145 GFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGD 204

Query: 327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 386
            +++ L  + + LG L       + RH E +              +  + + M+LP ++ 
Sbjct: 205 SDIDQLYHIIKCLGNL-------IPRHQEIF-------------QKNPLFAGMRLPEVKE 244

Query: 387 L--IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
           +  + +     +G +  L +  LR DP DR ++ + L H FF
Sbjct: 245 IEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  119 bits (301), Expect = 6e-31
 Identities = 80/339 (23%), Positives = 132/339 (38%), Gaps = 72/339 (21%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYRE----AAMIEIEVLQQLAKHD 154
           +K    +GEG+F  V+   ++E  +  AIKI+   +  +E       IE EVL +L  H 
Sbjct: 3   FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGH- 61

Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
            G    +++   F    ++  V E      L  ++RK  Y S      R  A ++L  + 
Sbjct: 62  PG---IIKLYYTFQDEENLYFVLEYAPNGELLQYIRK--YGSLDEKCTRFYAAEILLALE 116

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H   +IH DLKPEN+LL    +IK+ D+ ++     +SS        S         +
Sbjct: 117 YLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSS------PESNKGDATNIDS 170

Query: 274 TYERPDQN--YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 331
             E+  +     V T  Y +PE++         D+W++GCI+ ++ TG+  F+       
Sbjct: 171 QIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFR------- 223

Query: 332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH 391
                   G       +++    E         +P               P  ++LI   
Sbjct: 224 --------GSNEYLTFQKI-LKLE-------YSFPPNFP-----------PDAKDLI--- 253

Query: 392 VDHSAGDLTHLLQGLLRYDPTDRLTA----REALRHPFF 426
                       + LL  DP DRL       E   HPFF
Sbjct: 254 ------------EKLLVLDPQDRLGVNEGYDELKAHPFF 280

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  119 bits (300), Expect = 6e-31
 Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 54/258 (20%)

Query: 106 GEGTFGQVLECWDRERKEMVAIK---IVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 162
           G G+FG V    D++  E++A+K   +    ++  EA   EI +L  L +H       V+
Sbjct: 9   GRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSL-QH----PNIVR 63

Query: 163 IR--NWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
                  + +N + I  E + G SL   L+K  +   P  ++R+  RQ+LE +A++H   
Sbjct: 64  YYGSERDEEKNTLNIFLEYVSGGSLSSLLKK--FGKLPEPVIRKYTRQILEGLAYLHSNG 121

Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           ++H D+K  N+L+ S                              +K+ DFG       D
Sbjct: 122 IVHRDIKGANILVDSD---------------------------GVVKLADFGCAK-RLGD 153

Query: 280 QNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 333
                 T   R      APEVI G  +    DIWS+GC ++E+ TG+  +   E    +A
Sbjct: 154 IETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPW--SELGNPMA 211

Query: 334 MMERVLG-----PLPQHM 346
            + ++        +P+H+
Sbjct: 212 ALYKIGSSGEPPEIPEHL 229

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score =  119 bits (301), Expect = 2e-30
 Identities = 98/345 (28%), Positives = 157/345 (45%), Gaps = 68/345 (19%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY-REAAMI--EIEVLQQLAKHD 154
           RYKI   +G+G++G V    D    E VAIK +  + ++  +A  I  EI++L+ L   D
Sbjct: 1   RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPD 60

Query: 155 KGGNRCVQIRNWF------DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVRE----I 204
                 V+I++        ++++ I +VFE + S L+  ++ N+      DL  E     
Sbjct: 61  -----IVEIKHIMLPPSRREFKD-IYVVFELMESDLHQVIKAND------DLTPEHHQFF 108

Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             QLL  + ++H   + H DLKP+N+L  +   +K+ D+  +     D+         +A
Sbjct: 109 LYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP--------TA 160

Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL--GWTYPCDIWSVGCILVELCTGEAL 322
           I   D+             V+TR YRAPE+       +T   DIWS+GCI  E+ TG+ L
Sbjct: 161 IFWTDY-------------VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPL 207

Query: 323 FQTHENLEHLAMMERVLGPLPQHMLKRV-DRHAEKYVRRGRLDWPEGAASRESIKSVMKL 381
           F     +  L ++  +LG      + RV +  A +Y+   R   P        +    K 
Sbjct: 208 FPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQP--------VPFSQKF 259

Query: 382 PRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
           P    L ++           LL+ LL +DP DR TA EAL  P+F
Sbjct: 260 PNADPLALR-----------LLERLLAFDPKDRPTAEEALADPYF 293

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score =  116 bits (292), Expect = 1e-29
 Identities = 95/336 (28%), Positives = 150/336 (44%), Gaps = 71/336 (21%)

Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMIEIEVLQQLAKHDKGG 157
           K+GEGT+G V +  D+   E+VA+K +R      G+      A+ EI +L++L  H    
Sbjct: 6   KIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVP---STAIREISLLKEL-NHPN-- 59

Query: 158 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
              V++ +     N + +VFE L   L  ++  +        L++    QLL+ IA+ H 
Sbjct: 60  --IVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHS 117

Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYE 276
             ++H DLKP+N+L+                            +  A+K+ DFG +  + 
Sbjct: 118 HRVLHRDLKPQNLLI---------------------------DREGALKLADFGLARAFG 150

Query: 277 RPDQNYI--VSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHENLEHL 332
            P + Y   V T  YRAPE++LG    Y  P DIWS+GCI  E+     LF     ++ L
Sbjct: 151 VPVRTYTHEVVTLWYRAPEILLG-SRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQL 209

Query: 333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL--IMQ 390
             + R LG   + +                  WP G  S    K        Q+L  ++ 
Sbjct: 210 FRIFRTLGTPDEDV------------------WP-GVTSLPDYKPTFPKWARQDLSKVVP 250

Query: 391 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
           ++D    D   LL  +L YDP  R++A+ AL+HP+F
Sbjct: 251 NLDEDGLD---LLSKMLVYDPAKRISAKAALQHPYF 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score =  115 bits (291), Expect = 4e-29
 Identities = 92/355 (25%), Positives = 155/355 (43%), Gaps = 75/355 (21%)

Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREA--AMIEIEVLQQLA 151
           + SRYK    +G G +G V    D    + VAIK I         A   + E+++L+   
Sbjct: 3   VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHF- 61

Query: 152 KHDKGGNRCVQIRNWF-----DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIAR 206
           KHD      + IR+       D++  + +V + + S L+  +  +  +    + +R    
Sbjct: 62  KHDN----IIAIRDILRPPGADFK-DVYVVMDLMESDLHHIIHSD--QPLTEEHIRYFLY 114

Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSS 263
           QLL  + ++H   +IH DLKP N+L+     +++ D+   +    +P +  YF  M    
Sbjct: 115 QLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYF--M---- 168

Query: 264 AIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEAL 322
                    T Y        V+TR YRAPE++L L  +T   D+WSVGCI  E+     L
Sbjct: 169 ---------TEY--------VATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQL 211

Query: 323 FQTHENLEHLAMMERVLGPLPQHMLK-----RVDRHAEKYVRRGRLDWPE--GAASRESI 375
           F     +  L ++  VLG   + +L      RV ++ +   R+  + W +    AS E++
Sbjct: 212 FPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEAL 271

Query: 376 KSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
                                     LL  +L++DP +R+T  +AL+HPF  + H
Sbjct: 272 D-------------------------LLSQMLQFDPEERITVEQALQHPFLAQYH 301

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score =  114 bits (287), Expect = 1e-28
 Identities = 97/375 (25%), Positives = 155/375 (41%), Gaps = 105/375 (28%)

Query: 98  RYKIHSKMGEGTFGQVLECW--DRERKEMVAIKIVRGIKKYRE----AAMIEIEVLQQLA 151
           +Y+I   +G GT+G+V +    + +  +  AIK  +G K+       +A  EI +L++L 
Sbjct: 1   KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLREL- 59

Query: 152 KHDKGGNRCVQIRNWF--DYRNHICIVFEKLGSSLYDFL------RKNNYRSFPIDLVRE 203
           KH+      V +   F       + ++F+    + +D        R+    S P  +V+ 
Sbjct: 60  KHEN----VVSLVEVFLEHADKSVYLLFD---YAEHDLWQIIKFHRQAKRVSIPPSMVKS 112

Query: 204 IARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSS 263
           +  Q+L  + ++H   ++H DLKP N+L++                          P+  
Sbjct: 113 LLWQILNGVHYLHSNWVLHRDLKPANILVMGEG-----------------------PERG 149

Query: 264 AIKVIDFG-STTYERP-----DQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVEL 316
            +K+ D G +  +  P     D + +V T  YRAPE++LG   +T   DIW++GCI  EL
Sbjct: 150 VVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAEL 209

Query: 317 CTGEALFQTHE------NLEHLAMMER---VLGPLPQHMLKRVDRHAEKYVRRGRLDWPE 367
            T E +F+  E      N      +ER   VLG  P           EK       DWP+
Sbjct: 210 LTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGT-PT----------EK-------DWPD 251

Query: 368 GAASRESIKSVMKLPRLQNLIMQH------------VDHSAGDLT----HLLQGLLRYDP 411
                     + K+P    L+                             LL+ LL YDP
Sbjct: 252 ----------IKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDP 301

Query: 412 TDRLTAREALRHPFF 426
           T R+TA EAL HP+F
Sbjct: 302 TKRITAEEALEHPYF 316

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score =  113 bits (284), Expect = 2e-28
 Identities = 98/347 (28%), Positives = 152/347 (43%), Gaps = 74/347 (21%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMIEIEVLQQLAK 152
           Y+   K+GEGT+G+V +  D+   ++VA+K  R      GI      A+ EI +LQ L+ 
Sbjct: 3   YEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPP---TALREISLLQMLS- 58

Query: 153 HDKGGNRCVQIRNWFDYRNHICI--VFEKLGSSLYDFL---RKNNYRSFPIDLVREIARQ 207
                 R + + +  +      +  VFE L S L  F+    +   R  P   ++    Q
Sbjct: 59  ESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQ 118

Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           LL+ +A  H   ++H DLKP+N+L+   + +                          +K+
Sbjct: 119 LLKGVAHCHKHGVMHRDLKPQNLLVDKQKGL--------------------------LKI 152

Query: 268 IDFG-STTYERPDQNYI--VSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEAL 322
            D G    +  P ++Y   + T  YRAPEV+LG    Y  P DIWSVGCI  E+   + L
Sbjct: 153 ADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLG-STHYSTPVDIWSVGCIFAEMSRKQPL 211

Query: 323 FQTHENLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL 381
           F     L+ L  + ++LG P  Q                    WP  +  R+  +     
Sbjct: 212 FPGDSELQQLLHIFKLLGTPTEQ-------------------VWPGVSKLRDWHEFPQWK 252

Query: 382 PRLQNL--IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
           P  Q+L   +  +     D   LLQ +LRYDP  R++A+ AL HP+F
Sbjct: 253 P--QDLSRAVPDLSPEGLD---LLQKMLRYDPAKRISAKAALTHPYF 294

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score =  112 bits (283), Expect = 2e-28
 Identities = 95/335 (28%), Positives = 159/335 (47%), Gaps = 68/335 (20%)

Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMIEIEVLQQLAKHDKGG 157
           K+GEGT+G V +  +++  ++VA+K +R      G+      A+ EI +L++L +H    
Sbjct: 7   KIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVP---STAIREISLLKEL-QHPN-- 60

Query: 158 NRCVQIRNWFDYRNHICIVFEKLGSSL---YDFLRKNNYRSFPIDLVREIARQLLECIAF 214
              V +++     + + ++FE L   L    D L K  Y     +LV+    Q+L+ I F
Sbjct: 61  --IVCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQY--MDAELVKSYLYQILQGILF 116

Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   ++H DLKP+N+L+ +   IK+ D+               + ++  I V  +   T
Sbjct: 117 CHSRRVLHRDLKPQNLLIDNKGVIKLADFG--------------LARAFGIPVRVY---T 159

Query: 275 YERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 333
           +E       V T  YRAPEV+LG   ++ P DIWS+G I  E+ T + LF     ++ L 
Sbjct: 160 HE-------VVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLF 212

Query: 334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL--IMQH 391
            + R+LG  P                     WP G  S    K+     +  +L   +++
Sbjct: 213 RIFRILGT-PTE-----------------DVWP-GVTSLPDYKNTFPKWKKGSLRSAVKN 253

Query: 392 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
           +D    D   LL+ +L YDP  R++A++AL HP+F
Sbjct: 254 LDEDGLD---LLEKMLIYDPAKRISAKKALNHPYF 285

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score =  112 bits (281), Expect = 6e-28
 Identities = 95/355 (26%), Positives = 153/355 (43%), Gaps = 76/355 (21%)

Query: 92  GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVL 147
           G+    ++ I  ++GEGT+GQV +  D++  E+VA+K VR +   +E     A+ EI++L
Sbjct: 2   GKRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVR-LDNEKEGFPITAIREIKIL 60

Query: 148 QQLAKHDKGGNRC---VQIRNWFDYRNH---ICIVFEKLGSSLYDFLRKNNYRSFPIDLV 201
           +QL  H    N        ++  D++       +VFE +   L   L ++    F  D +
Sbjct: 61  RQL-NHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLL-ESGLVHFSEDHI 118

Query: 202 REIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPK 261
           +   +QLLE + + H    +H D+K  N+LL +   IK+ D+  +     + S       
Sbjct: 119 KSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEES------- 171

Query: 262 SSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPC-DIWSVGCILVELCTGE 320
                          RP  N ++ T  YR PE++LG     P  D+WS GCIL EL T +
Sbjct: 172 ---------------RPYTNKVI-TLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKK 215

Query: 321 ALFQTHENLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVM 379
            +FQ ++ L  L ++ R+ G P P                     WP+          V+
Sbjct: 216 PIFQANQELAQLELISRLCGSPCPA-------------------VWPD----------VI 246

Query: 380 KLPRLQNL---------IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 425
           KLP    +         + +           LL  +L  DP+ R TA EAL  P+
Sbjct: 247 KLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPW 301

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  110 bits (278), Expect = 7e-28
 Identities = 81/329 (24%), Positives = 134/329 (40%), Gaps = 88/329 (26%)

Query: 106 GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIE--VLQQLAKHDKGGNRCV 161
           G+G+FG+VL    ++  ++ A+K+++   I K +E      E  +L ++  H       V
Sbjct: 2   GKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRI-NHP----FIV 56

Query: 162 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           ++   F     + +V E   G  L+  L K     F  +  R  A +++  + ++H L +
Sbjct: 57  KLHYAFQTEEKLYLVLEYAPGGELFSHLSK--EGRFSEERARFYAAEIVLALEYLHSLGI 114

Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 280
           I+ DLKPEN+LL +  +IK+ D+                    A ++   GS T      
Sbjct: 115 IYRDLKPENILLDADGHIKLTDF------------------GLAKELSSEGSRTNT---- 152

Query: 281 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLG 340
                T  Y APEV+LG G+    D WS+G +L E+ TG+  F   +  E   + E++L 
Sbjct: 153 --FCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKE---IYEKIL- 206

Query: 341 PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT 400
                              +  L +PE  +                           +  
Sbjct: 207 -------------------KDPLRFPEFLSP--------------------------EAR 221

Query: 401 HLLQGLLRYDPTDRLTAREA---LRHPFF 426
            L+ GLL+ DPT RL +  A     HPFF
Sbjct: 222 DLISGLLQKDPTKRLGSGGAEEIKAHPFF 250

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score =  110 bits (277), Expect = 1e-27
 Identities = 86/337 (25%), Positives = 142/337 (42%), Gaps = 57/337 (16%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHD 154
           +Y+  +++G G +G V +  D      VA+K VR          + + E+ +L++L   D
Sbjct: 1   QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFD 60

Query: 155 -----KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 209
                +  + C   R   D    + +VFE +   L  +L K      P + ++++ RQ L
Sbjct: 61  HPNIVRLMDVCATSRT--DRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFL 118

Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
             + F+H  C++H DLKPEN+L+ S   +K+ D+  +        Y  +M  +       
Sbjct: 119 RGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLA------RIYSCQMALTP------ 166

Query: 270 FGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 329
                        +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF  +   
Sbjct: 167 -------------VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA 213

Query: 330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM 389
           + L  +  ++G  P+                   DWP          S    PR    + 
Sbjct: 214 DQLGKIFDLIGLPPED------------------DWPRDVTLPRGAFS----PRGPRPVQ 251

Query: 390 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             V         LL  +L ++P  R++A  AL+HPFF
Sbjct: 252 SVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score =  109 bits (274), Expect = 2e-27
 Identities = 81/328 (24%), Positives = 129/328 (39%), Gaps = 78/328 (23%)

Query: 108 GTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVLQQLAKHDKGGNRCVQI 163
           G +G+V     +   ++ AIK+++     R+      + E ++L Q           V++
Sbjct: 4   GAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQ-----SPYVVKL 58

Query: 164 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
              F  + ++ +V E L G  L   L   N  S   D+ R    +++  + ++H   +IH
Sbjct: 59  YYSFQGKKNLYLVMEYLPGGDLASLLE--NVGSLDEDVARIYIAEIVLALEYLHSNGIIH 116

Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
            DLKP+N+L+ S+ ++K+ D+   L      S    + +   +   +             
Sbjct: 117 RDLKPDNILIDSNGHLKLTDF--GL------SKVGLVRRQINLNDDEKEDKR-------- 160

Query: 283 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 342
           IV T  Y APEVILG G +   D WS+GCIL E   G   F  H         E +    
Sbjct: 161 IVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPF--HGETP-----EEIF--- 210

Query: 343 PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL 402
            Q++L             G+++WPE          V       +LI              
Sbjct: 211 -QNILN------------GKIEWPED---------VEVSDEAIDLI-------------- 234

Query: 403 LQGLLRYDPTDRLTAR---EALRHPFFT 427
              LL  DP  RL A+   E   HPFF 
Sbjct: 235 -SKLLVPDPEKRLGAKSIEEIKNHPFFK 261

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  108 bits (273), Expect = 3e-27
 Identities = 81/340 (23%), Positives = 143/340 (42%), Gaps = 93/340 (27%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---RGIKKYREAAMIEIEVLQQLAKHD 154
           +Y+I  ++G+G+FG+V     +   ++  +K +      +K RE A+ E+++L++L  H 
Sbjct: 1   KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKL-NHP 59

Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFL--RKNNYRSFPIDLVREIARQLLEC 211
              N  ++    F+ +  +CIV E   G  L   +  +K   + FP + + +   QL   
Sbjct: 60  ---N-IIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLA 115

Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           + ++H   ++H D+KP+N+ L +S  +                          +K+ DFG
Sbjct: 116 LKYLHSRKILHRDIKPQNIFL-TSNGL--------------------------VKLGDFG 148

Query: 272 -STTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 328
            S            +V T +Y +PE+     + Y  DIWS+GC+L ELCT +  F+  EN
Sbjct: 149 ISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFE-GEN 207

Query: 329 LEHLAM--MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 386
           L  LA+  ++    P+P             Y             S E          L+N
Sbjct: 208 LLELALKILKGQYPPIPSQ-----------Y-------------SSE----------LRN 233

Query: 387 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
           L+                 LL+ DP +R +  + L+ PF 
Sbjct: 234 LV---------------SSLLQKDPEERPSIAQILQSPFI 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score =  109 bits (275), Expect = 4e-27
 Identities = 85/349 (24%), Positives = 144/349 (41%), Gaps = 62/349 (17%)

Query: 96  TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYRE----AAMIEIEVLQQLA 151
              Y+I  K+GEGTFG+V +    +   +VA+K +  +   ++     A+ EI++L++L 
Sbjct: 7   LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKIL-MHNEKDGFPITALREIKILKKLK 65

Query: 152 -------------KHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPI 198
                        + DK   +          R  + +V   +   L   L   + +    
Sbjct: 66  HPNVVPLIDMAVERPDKSKRK----------RGSVYMVTPYMDHDLSGLLENPSVKLTES 115

Query: 199 DLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKR 258
             ++    QLLE I ++H+  ++H D+K  N+L+ +   +K+ D+   L  P D      
Sbjct: 116 Q-IKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADF--GLARPYDGP--PP 170

Query: 259 MPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELC 317
            PK         G     R   N +V TR YR PE++LG   +T   DIW +GC+  E+ 
Sbjct: 171 NPKG--------GGGGGTRKYTNLVV-TRWYRPPELLLGERRYTTAVDIWGIGCVFAEMF 221

Query: 318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS 377
           T   + Q   +++ L ++ ++ G   +                    WP G  S    + 
Sbjct: 222 TRRPILQGKSDIDQLHLIFKLCGTPTEE------------------TWP-GWRSLPGCEG 262

Query: 378 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
           V         + +       +   LL  LL  DP  RLTA +AL HP+F
Sbjct: 263 VHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score =  109 bits (274), Expect = 9e-27
 Identities = 84/370 (22%), Positives = 155/370 (41%), Gaps = 83/370 (22%)

Query: 93  ENLTSRYK-IHSKMGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYRE------- 138
            +++ RY    + +GEGT+G+V + +D    ++VAIK V+       + K R+       
Sbjct: 4   FSISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGI 63

Query: 139 --AAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSF 196
               + E++++ ++   +  G   V +   F     I +V + + S L   +  +     
Sbjct: 64  HFTTLRELKIMNEIKHENIMGLVDVYVEGDF-----INLVMDIMASDLKKVV--DRKIRL 116

Query: 197 PIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDS 253
               V+ I  Q+L  +  +H    +H DL P N+ + S    K+ D+   +   + P   
Sbjct: 117 TESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSD 176

Query: 254 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCI 312
           +  K        ++      T +       V T  YRAPE+++G   + +  D+WSVGCI
Sbjct: 177 TLSKDETMQRREEM------TSK-------VVTLWYRAPELLMGAEKYHFAVDMWSVGCI 223

Query: 313 LVELCTGEALFQTHENLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEG--- 368
             EL TG+ LF     ++ L  +  +LG P                      +WP+    
Sbjct: 224 FAELLTGKPLFPGENEIDQLGRIFELLGTPNED-------------------NWPQAKKL 264

Query: 369 -------AASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 421
                      + +K++               +++ D   LLQ LL+ +P +R++A+EAL
Sbjct: 265 PLYTEFTPRKPKDLKTIFP-------------NASDDAIDLLQSLLKLNPLERISAKEAL 311

Query: 422 RHPFFTRDHL 431
           +H +F  D L
Sbjct: 312 KHEYFKSDPL 321

Length = 335

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score =  107 bits (268), Expect = 3e-26
 Identities = 92/339 (27%), Positives = 157/339 (46%), Gaps = 64/339 (18%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVLQQLAKH 153
           +Y+   K+GEGT+G V +  DR   E +A+K +R +++  E     A+ EI +L+++ +H
Sbjct: 3   QYEKVEKIGEGTYGVVYKARDRVTNETIALKKIR-LEQEDEGVPSTAIREISLLKEM-QH 60

Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                  V++++       + +VFE L   L   +  +   +    L++    Q+L  IA
Sbjct: 61  GN----IVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIA 116

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-S 272
           + H   ++H DLKP+N+L+                             ++A+K+ DFG +
Sbjct: 117 YCHSHRVLHRDLKPQNLLIDRR--------------------------TNALKLADFGLA 150

Query: 273 TTYERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENL 329
             +  P + +   V T  YRAPE++LG   ++ P DIWSVGCI  E+   + LF     +
Sbjct: 151 RAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI 210

Query: 330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL-- 387
           + L  + R+LG   +                    WP G  S    KS       ++L  
Sbjct: 211 DELFKIFRILGTPNEET------------------WP-GVTSLPDYKSAFPKWPPKDLAT 251

Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
           ++  ++ +  D   LL  +LR DP+ R+TAR AL H +F
Sbjct: 252 VVPTLEPAGVD---LLSKMLRLDPSKRITARAALEHEYF 287

Length = 294

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score =  106 bits (266), Expect = 4e-26
 Identities = 97/349 (27%), Positives = 152/349 (43%), Gaps = 85/349 (24%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMIEIEVLQQLA 151
           +Y+   K+GEGT+G V +  +RE  E+VA+K VR      G+     +A+ EI +L++L 
Sbjct: 1   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVP---SSALREICLLKEL- 56

Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
           KH       V++ +       + +VFE     L  +    N    P ++V+    QLL+ 
Sbjct: 57  KH----KNIVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDP-EIVKSFMFQLLKG 111

Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           +AF H   ++H DLKP+N+L+                            K+  +K+ DFG
Sbjct: 112 LAFCHSHNVLHRDLKPQNLLI---------------------------NKNGELKLADFG 144

Query: 272 -STTYERPDQNYI--VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCT-GEALFQTH 326
            +  +  P + Y   V T  YR P+V+ G   ++   D+WS GCI  EL   G  LF  +
Sbjct: 145 LARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN 204

Query: 327 ENLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 385
           +  + L  + R+LG P  +                    WP           V KLP  +
Sbjct: 205 DVDDQLKRIFRLLGTPTEE-------------------SWP----------GVSKLPDYK 235

Query: 386 NLIMQHVDHSAGDLT--------HLLQGLLRYDPTDRLTAREALRHPFF 426
              M     S  ++          LLQ LL  +P  R++A EAL+HP+F
Sbjct: 236 PYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score =  106 bits (265), Expect = 1e-25
 Identities = 87/348 (25%), Positives = 150/348 (43%), Gaps = 72/348 (20%)

Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-----EIEVLQQ 149
           +T+RY     +G G FG V    D+   + VAIK +  +K +    +      E+++L+ 
Sbjct: 8   ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKI--MKPFSTPVLAKRTYRELKLLKH 65

Query: 150 LAKHDKGGNRCVQIRNWF-DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQL 208
           L +H+      + + + F      I  V E LG+ L+  L     R      ++    Q+
Sbjct: 66  L-RHEN----IISLSDIFISPLEDIYFVTELLGTDLHRLLTS---RPLEKQFIQYFLYQI 117

Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
           L  + ++H   ++H DLKP N+L+                            ++  +K+ 
Sbjct: 118 LRGLKYVHSAGVVHRDLKPSNILI---------------------------NENCDLKIC 150

Query: 269 DFGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHE 327
           DFG    + P     VSTR+YRAPE++L    +    DIWS GCI  E+  G+ LF   +
Sbjct: 151 DFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKD 210

Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR---- 383
           ++   +++  +LG  P  ++  +                    S  +++ V  LP+    
Sbjct: 211 HVNQFSIITDLLGTPPDDVINTI-------------------CSENTLRFVQSLPKREPV 251

Query: 384 -LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
                  ++ D SA D   LL+ +L +DP  R++A EAL HP+    H
Sbjct: 252 PFSEKF-KNADPSAID---LLEKMLVFDPQKRISAAEALAHPYLAPYH 295

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  104 bits (261), Expect = 1e-25
 Identities = 66/229 (28%), Positives = 101/229 (44%), Gaps = 41/229 (17%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA---AMIEIEVLQQLAKHD 154
            Y++   +G G FG V +  + E  + VAIK +   K   EA    M EI++L+ L KH 
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNL-KH- 58

Query: 155 KGGNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                 V+     +  + + I+ E     SL   ++K     FP  LV     Q+L+ +A
Sbjct: 59  ---PNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFG--PFPESLVAVYVYQVLQGLA 113

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H+  +IH D+K  N+L                             K   +K+ DFG  
Sbjct: 114 YLHEQGVIHRDIKAANIL---------------------------TTKDGVVKLADFGVA 146

Query: 274 TY---ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
           T       D   +V T ++ APEVI   G +   DIWS+GC ++EL TG
Sbjct: 147 TKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTG 195

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score =  106 bits (265), Expect = 2e-25
 Identities = 93/346 (26%), Positives = 153/346 (44%), Gaps = 67/346 (19%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR--------EAAMIEIEVLQ 148
            RY+   ++G G +G V    DR     VAIK     K YR        + A  E+ +L+
Sbjct: 15  DRYRDLKQVGSGAYGTVCSALDRRTGAKVAIK-----KLYRPFQSELFAKRAYRELRLLK 69

Query: 149 QLAKHDK--GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIAR 206
            + KH+   G           D  +   +V   +G+ L   ++   +     D ++ +  
Sbjct: 70  HM-KHENVIGLLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMK---HEKLSEDRIQFLVY 125

Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L+ + ++H   +IH DLKP N L V+ +                            +K
Sbjct: 126 QMLKGLKYIHAAGIIHRDLKPGN-LAVNED--------------------------CELK 158

Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQT 325
           ++DFG       +    V TR YRAPEVIL  + +T   DIWSVGCI+ E+ TG+ LF+ 
Sbjct: 159 ILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKG 218

Query: 326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 385
           H++L+ L  + +V G   +  ++++                    S ++   V KLPR +
Sbjct: 219 HDHLDQLMEIMKVTGTPSKEFVQKLQ-------------------SEDAKNYVKKLPRFR 259

Query: 386 NLIMQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
               + +  +A  L  ++L+ +L  D   R+TA EAL HP+F   H
Sbjct: 260 KKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFH 305

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score =  103 bits (260), Expect = 7e-25
 Identities = 89/337 (26%), Positives = 153/337 (45%), Gaps = 47/337 (13%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK--YREAAMIEIEVLQQL 150
            ++  RY+  S +GEG +G V     +     VAIK +   +   + +  + EI++L++ 
Sbjct: 1   FDVGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRF 60

Query: 151 AKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
              +  G   +     F+  N + IV E + + LY  ++  +  +   D ++    Q+L 
Sbjct: 61  KHENIIGILDIIRPPSFESFNDVYIVQELMETDLYKLIKTQHLSN---DHIQYFLYQILR 117

Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++H   ++H DLKP N+LL ++  +K+ D+  +     +  +   +           
Sbjct: 118 GLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFL----------- 166

Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENL 329
             T Y        V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   LF   + L
Sbjct: 167 --TEY--------VATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL 216

Query: 330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLI 388
             L ++  VLG   Q  L  +                    +R  IKS+   P++  N +
Sbjct: 217 HQLNLILGVLGTPSQEDLNCI----------------ISLRARNYIKSLPFKPKVPWNKL 260

Query: 389 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 425
             + D  A D   LL  +L ++P  R+T  EAL HP+
Sbjct: 261 FPNADPKALD---LLDKMLTFNPHKRITVEEALAHPY 294

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score =  103 bits (259), Expect = 9e-25
 Identities = 98/348 (28%), Positives = 146/348 (41%), Gaps = 76/348 (21%)

Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIKK--YREAAMIEIEVLQQLA 151
           L  RY    ++G G +G V    D+   E VAIK + R  +   + + A  E+ +L+ + 
Sbjct: 13  LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQ 72

Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDF----------LRKNNYRSFPIDLV 201
             +  G   V                   G    DF          L+K        D V
Sbjct: 73  HENVIGLLDVF-------------TSAVSGDEFQDFYLVMPYMQTDLQKIMGHPLSEDKV 119

Query: 202 REIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPK 261
           + +  Q+L  + ++H   +IH DLKP N L V+ +                         
Sbjct: 120 QYLVYQMLCGLKYIHSAGIIHRDLKPGN-LAVNED------------------------- 153

Query: 262 SSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGE 320
              +K++DFG   +   +    V TR YRAPEVIL  + +    DIWSVGCI+ E+ TG+
Sbjct: 154 -CELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGK 212

Query: 321 ALFQTHENLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVM 379
            LF+  + L+ L  + +V G P P+ + K  D+ A+ Y                 IKS+ 
Sbjct: 213 TLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSY-----------------IKSLP 255

Query: 380 KLPRLQ-NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
           K PR   + +       A D   LL+ +L  D   RLTA EAL HP+F
Sbjct: 256 KYPRKDFSTLFPKASPQAVD---LLEKMLELDVDKRLTATEALEHPYF 300

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score =  103 bits (260), Expect = 1e-24
 Identities = 92/355 (25%), Positives = 151/355 (42%), Gaps = 87/355 (24%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG 157
           RY+  S +G G +GQV   +D +    VAIK     K  R           Q A H K  
Sbjct: 16  RYQNLSPVGSGAYGQVCSAFDTKTGRKVAIK-----KLSRPF---------QSAIHAKRT 61

Query: 158 NRCVQIRNWFDYRNHIC------------------IVFEKLGSSLYDFLRKNNYRSFPID 199
            R +++    D+ N I                   +V   +G+ L + ++    +    D
Sbjct: 62  YRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKC---QKLSDD 118

Query: 200 LVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM 259
            ++ +  Q+L  + ++H   +IH DLKP N+ +     +K+ D+  + HT  +      M
Sbjct: 119 HIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE------M 172

Query: 260 PKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCT 318
                        T Y        V+TR YRAPE++L  + +    DIWSVGCI+ EL T
Sbjct: 173 -------------TGY--------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 211

Query: 319 GEALFQTHENLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS 377
           G+ LF   ++++ L  +  ++G P  + + K     A  Y                 I+S
Sbjct: 212 GKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNY-----------------IQS 254

Query: 378 VMKLPR--LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           + ++P+   + +     +  A D   LL+ +L  DP  R+TA EAL HP+    H
Sbjct: 255 LPQMPKKDFKEVFSGA-NPLAID---LLEKMLVLDPDKRITAAEALAHPYLAEYH 305

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score =  102 bits (257), Expect = 1e-24
 Identities = 84/355 (23%), Positives = 145/355 (40%), Gaps = 81/355 (22%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVLQQLAK 152
           S+Y+  +K+G+GTFG+V +   ++ K++VA+K V  ++  +E     A+ EI++LQ L K
Sbjct: 12  SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVL-MENEKEGFPITALREIKILQLL-K 69

Query: 153 HD-------------KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPID 199
           H+                NR         Y+    +VFE     L   L  N    F + 
Sbjct: 70  HENVVNLIEICRTKATPYNR---------YKGSFYLVFEFCEHDLAGLL-SNKNVKFTLS 119

Query: 200 LVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM 259
            ++++ + LL  + ++H   ++H D+K  N+L+                           
Sbjct: 120 EIKKVMKMLLNGLYYIHRNKILHRDMKAANILIT-------------------------- 153

Query: 260 PKSSAIKVIDFG-------STTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGC 311
            K   +K+ DFG       S   +       V T  YR PE++LG   +  P D+W  GC
Sbjct: 154 -KDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGC 212

Query: 312 ILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAAS 371
           I+ E+ T   + Q +     L ++ ++ G +   +   VD    K     +++ P+G   
Sbjct: 213 IMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVD----KLELFKKMELPQGQKR 268

Query: 372 RESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
           +   +    +     L              L+  LL  DP  R+ A  AL H FF
Sbjct: 269 KVKERLKPYVKDPHAL-------------DLIDKLLVLDPAKRIDADTALNHDFF 310

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score =  102 bits (255), Expect = 3e-24
 Identities = 87/353 (24%), Positives = 153/353 (43%), Gaps = 83/353 (23%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 18  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 68

Query: 150 LAKHDKGGN-----RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N              +  N + +V   +G+ L + ++    +    D V+ +
Sbjct: 69  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 125

Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+ +                            +   
Sbjct: 126 IYQILRGLKYIHSADIIHRDLKPSNLAV---------------------------NEDCE 158

Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 159 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 218

Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 219 PGTDHIDQLKLILRLVGTPGAELLKKISSE----------------SARNYIQSLTQMPK 262

Query: 384 L--QNLIM----QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +   N+ +      VD        LL+ +L  D   R+TA +AL H +F + H
Sbjct: 263 MNFANVFIGANPLAVD--------LLEKMLVLDSDKRITAAQALAHAYFAQYH 307

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score =  100 bits (250), Expect = 7e-24
 Identities = 86/340 (25%), Positives = 147/340 (43%), Gaps = 62/340 (18%)

Query: 98  RYKIHSKMGEGTFGQVLECWD-RERKEMVAIKIVRGIKKYRE----AAMIEIEVLQQLAK 152
           +Y+  +++GEG +G+V +  D +     VA+K VR ++   E    + + E+ VL+ L  
Sbjct: 2   QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR-VQTGEEGMPLSTIREVAVLRHLET 60

Query: 153 HDKGG-----NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQ 207
            +        + C   R   D    + +VFE +   L  +L K      P + ++++  Q
Sbjct: 61  FEHPNVVRLFDVCTVSRT--DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 118

Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           LL  + F+H   ++H DLKP+N+L+ SS  IK+ D+  +                   ++
Sbjct: 119 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA-------------------RI 159

Query: 268 IDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 327
             F            +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF+   
Sbjct: 160 YSFQMAL------TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS 213

Query: 328 NLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 386
           +++ L  +  V+G P  +                   DWP   A             ++ 
Sbjct: 214 DVDQLGKILDVIGLPGEE-------------------DWPRDVALPRQAFHSKSAQPIEK 254

Query: 387 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
            +   +D    D   LL   L ++P  R++A  AL HP+F
Sbjct: 255 FV-TDIDELGKD---LLLKCLTFNPAKRISAYSALSHPYF 290

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 99.3 bits (248), Expect = 9e-24
 Identities = 83/340 (24%), Positives = 129/340 (37%), Gaps = 101/340 (29%)

Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI----EIEVLQQLAKHDKGGNR 159
           K+G GTFG+V    + +  E++A+K +R I+      +     E++VL+ L KH      
Sbjct: 7   KIGGGTFGKVYTAVNLDTGELMAVKEIR-IQDNDPKTIKEIADEMKVLELL-KHP----- 59

Query: 160 CVQIRNWFDY------RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
                N   Y      R  + I  E   G +L + L   + R     ++R    QLLE +
Sbjct: 60  -----NLVKYYGVEVHREKVYIFMEYCSGGTLEELLE--HGRILDEHVIRVYTLQLLEGL 112

Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
           A++H   ++H D+KP N+ L  +  IK+ D+  +                     +   +
Sbjct: 113 AYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCA-------------------VKLKNNT 153

Query: 273 TTYERPDQNYIVSTRHYRAPEVILG---LGWTYPCDIWSVGCILVELCTG----EALFQT 325
           TT     Q+    T  Y APEVI G    G     DIWS+GC+++E+ TG      L   
Sbjct: 154 TTMGEEVQSL-AGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE 212

Query: 326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 385
            + + H+    +   P+P  +                   PEG                 
Sbjct: 213 FQIMFHVGAGHK--PPIPDSLQLS----------------PEG----------------- 237

Query: 386 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 425
                 +D             L  DP  R TA E L+HPF
Sbjct: 238 ---KDFLDRC-----------LESDPKKRPTASELLQHPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score =  100 bits (252), Expect = 1e-23
 Identities = 72/270 (26%), Positives = 114/270 (42%), Gaps = 51/270 (18%)

Query: 168 DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKP 227
           D    I +V E + S L+  +     +    D V+    Q+L  + ++H   ++H D+KP
Sbjct: 74  DPFEEIYVVTELMQSDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKP 131

Query: 228 ENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI---- 283
            N LLV+S  +                          +K+ DFG    E PD++      
Sbjct: 132 GN-LLVNSNCV--------------------------LKICDFGLARVEEPDESKHMTQE 164

Query: 284 VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 342
           V T++YRAPE+++G   +T   DIWSVGCI  EL     LFQ    ++ L ++  +LG  
Sbjct: 165 VVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTP 224

Query: 343 PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL 402
               ++     A  ++ R                   K P L  L       +  +  HL
Sbjct: 225 SLEAMRSACEGARAHILR----------------GPHKPPSLPVLYT-LSSQATHEAVHL 267

Query: 403 LQGLLRYDPTDRLTAREALRHPFFTRDHLR 432
           L  +L +DP  R++A +AL HP+     LR
Sbjct: 268 LCRMLVFDPDKRISAADALAHPYLDEGRLR 297

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score =  100 bits (250), Expect = 1e-23
 Identities = 90/350 (25%), Positives = 155/350 (44%), Gaps = 77/350 (22%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  + +G G +G V   +D   ++ VA+K        ++   + YRE          +
Sbjct: 16  RYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYREL---------R 66

Query: 150 LAKHDKGGNRCVQIRNWF------DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVRE 203
           L KH K  N  + + + F      +  N + +V   +G+ L + ++    +    + V+ 
Sbjct: 67  LLKHMKHEN-VIGLLDVFTPATSIENFNEVYLVTNLMGADLNNIVK---CQKLSDEHVQF 122

Query: 204 IARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSS 263
           +  QLL  + ++H   +IH DLKP NV +                            +  
Sbjct: 123 LIYQLLRGLKYIHSAGIIHRDLKPSNVAV---------------------------NEDC 155

Query: 264 AIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEAL 322
            ++++DFG       +    V+TR YRAPE++L  + +    DIWSVGCI+ EL  G+AL
Sbjct: 156 ELRILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKAL 215

Query: 323 FQTHENLEHLA-MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL 381
           F  ++ ++ L  +ME V  P P+ + K    HA KY++                     L
Sbjct: 216 FPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQ--------------------SL 255

Query: 382 PRLQNLIMQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           P +    ++ +   A  L   LL+ +L  D   R++A EAL HP+F++ H
Sbjct: 256 PHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYH 305

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 98.0 bits (245), Expect = 3e-23
 Identities = 78/332 (23%), Positives = 125/332 (37%), Gaps = 89/332 (26%)

Query: 103 SKMGEGTFGQVLECWDRERKEMVAIKI--VRGIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
             +G+G+ G V +   +   ++ A+K   V G +++R+  + E++ L+   +        
Sbjct: 7   KVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRS-CESPY----V 61

Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH-DL 218
           V+    F     I IV E + G SL D L+K      P  ++  IARQ+L+ + ++H   
Sbjct: 62  VKCYGAFYKEGEISIVLEYMDGGSLADLLKK--VGKIPEPVLAYIARQILKGLDYLHTKR 119

Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYER 277
            +IH D+KP N+L+ S   +K+                            DFG S   E 
Sbjct: 120 HIIHRDIKPSNLLINSKGEVKIA---------------------------DFGISKVLEN 152

Query: 278 ---PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                  + V T  Y +PE I G  ++Y  DIWS+G  L+E   G+  F          +
Sbjct: 153 TLDQCNTF-VGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFEL 211

Query: 335 MERVL-GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 393
           M+ +  GP P                      P    S E                    
Sbjct: 212 MQAICDGPPP--------------------SLPAEEFSPE-------------------- 231

Query: 394 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 425
                    +   L+ DP  R +A E L+HPF
Sbjct: 232 -----FRDFISACLQKDPKKRPSAAELLQHPF 258

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 97.3 bits (243), Expect = 5e-23
 Identities = 64/261 (24%), Positives = 113/261 (43%), Gaps = 39/261 (14%)

Query: 106 GEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRCV 161
           G G FG+V     + +    A+K V  R I +  +   I  E E+L++   H       V
Sbjct: 2   GVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECN-HP----FIV 56

Query: 162 QIRNWFDYRNHICIVFEK-LGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           ++   F  + +I ++ E  LG  L+  LR      F     R     ++    ++H+  +
Sbjct: 57  KLYRTFKDKKYIYMLMEYCLGGELWTILRDRG--LFDEYTARFYIACVVLAFEYLHNRGI 114

Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 280
           I+ DLKPEN+LL S+ Y+K+ D+  +                   K +  G  T+     
Sbjct: 115 IYRDLKPENLLLDSNGYVKLVDFGFA-------------------KKLKSGQKTWT---- 151

Query: 281 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLG 340
                T  Y APE+IL  G+ +  D WS+G +L EL TG   F   ++ + + +   +L 
Sbjct: 152 --FCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGE-DDEDPMEIYNDILK 208

Query: 341 PLPQHML-KRVDRHAEKYVRR 360
              +      +D+ A+  +++
Sbjct: 209 GNGKLEFPNYIDKAAKDLIKQ 229

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 96.2 bits (239), Expect = 2e-22
 Identities = 94/330 (28%), Positives = 146/330 (44%), Gaps = 60/330 (18%)

Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAA----MIEIEVLQQLAKHDKGGNR 159
           K+GEGT+  V +   +  + +VA+K +R   ++ E A    + E+ +L+ L KH      
Sbjct: 12  KLGEGTYATVFKGRSKLTENLVALKEIR--LEHEEGAPCTAIREVSLLKNL-KH----AN 64

Query: 160 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
            V + +       + +VFE L S L  +L  N      +  V+    QLL  +++ H   
Sbjct: 65  IVTLHDIIHTERCLTLVFEYLDSDLKQYL-DNCGNLMSMHNVKIFMFQLLRGLSYCHKRK 123

Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           ++H DLKP+N+L+     +K+ D+          +  K +P           + TY    
Sbjct: 124 ILHRDLKPQNLLINEKGELKLADF--------GLARAKSVP-----------TKTYSNE- 163

Query: 280 QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 338
               V T  YR P+V+LG   ++ P D+W VGCIL E+ TG  +F      E L ++ R+
Sbjct: 164 ----VVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRL 219

Query: 339 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP--RLQNLIMQHVDHSA 396
           LG   +                    WP G  S E  +S +  P  R Q LI  H     
Sbjct: 220 LGTPTEE------------------TWP-GITSNEEFRSYL-FPQYRAQPLI-NHAPRLD 258

Query: 397 GDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
            D   LL  LL Y+   R++A  ALRH +F
Sbjct: 259 TDGIDLLSSLLLYETKSRISAEAALRHSYF 288

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 97.1 bits (242), Expect = 2e-22
 Identities = 94/351 (26%), Positives = 155/351 (44%), Gaps = 70/351 (19%)

Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREA--AMIEIEVLQQLA 151
           + ++Y     +G G +G V    + E  E VAIK I        +A   + EI++L+ L 
Sbjct: 3   VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHL- 61

Query: 152 KHDKGGNRCVQIRNWF-----DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIAR 206
            H+      + I++       +  N + IV+E + + L+  +R +  ++   D  +    
Sbjct: 62  DHEN----VIAIKDIMPPPHREAFNDVYIVYELMDTDLHQIIRSS--QTLSDDHCQYFLY 115

Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           QLL  + ++H   ++H DLKP N+LL ++                             +K
Sbjct: 116 QLLRGLKYIHSANVLHRDLKPSNLLLNAN---------------------------CDLK 148

Query: 267 VIDFG--STTYERPDQ--NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEA 321
           + DFG   TT E+ D    Y+V TR YRAPE++L    +T   D+WSVGCI  EL   + 
Sbjct: 149 ICDFGLARTTSEKGDFMTEYVV-TRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKP 207

Query: 322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL 381
           LF   + +  L ++  +LG                      L +     +R  I+S+   
Sbjct: 208 LFPGKDYVHQLKLITELLGS----------------PSEEDLGFIRNEKARRYIRSLPYT 251

Query: 382 PRLQNL--IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           PR Q+   +  H +  A D   LL+ +L +DP+ R+T  EAL HP+    H
Sbjct: 252 PR-QSFARLFPHANPLAID---LLEKMLVFDPSKRITVEEALAHPYLASLH 298

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 98.2 bits (244), Expect = 2e-22
 Identities = 91/347 (26%), Positives = 155/347 (44%), Gaps = 69/347 (19%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLA---KHDK 155
           YK+ + +G G+FG V E    +  E VAIK V    +Y+   ++ ++ L  +      D 
Sbjct: 68  YKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDY 127

Query: 156 GGNRCVQI--RNWFDYRNHICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLEC 211
               C +   +N F     + +V E +  +++ +++    N  + P+ LV+  + QL   
Sbjct: 128 YYTECFKKNEKNIF-----LNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRA 182

Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           +A++H   + H DLKP+N+L+                           P +  +K+ DFG
Sbjct: 183 LAYIHSKFICHRDLKPQNLLI--------------------------DPNTHTLKLCDFG 216

Query: 272 STTYERPDQ---NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 327
           S       Q   +YI S R YRAPE++LG   +T   D+WS+GCI+ E+  G  +F    
Sbjct: 217 SAKNLLAGQRSVSYICS-RFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQS 275

Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           +++ L  + +VLG   +  LK ++              P  A         +K P ++  
Sbjct: 276 SVDQLVRIIQVLGTPTEDQLKEMN--------------PNYAD--------IKFPDVKPK 313

Query: 388 IMQHV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 432
            ++ V    +  D  + +   L+Y+P  RL   EAL  PFF  D LR
Sbjct: 314 DLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFF--DDLR 358

Length = 440

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 94.9 bits (236), Expect = 4e-22
 Identities = 64/221 (28%), Positives = 105/221 (47%), Gaps = 35/221 (15%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIV------RGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           +G+G FG+V  C+D +    +A+K V         KK   A   EI++L+ L +H     
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL-QH----E 64

Query: 159 RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
           R VQ          + I  E + G S+ D L+   Y +    + R+  RQ+LE + ++H 
Sbjct: 65  RIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKA--YGALTETVTRKYTRQILEGVEYLHS 122

Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
             ++H D+K  N+L  S+  +K+ D+ +S          KR+     I      S T  +
Sbjct: 123 NMIVHRDIKGANILRDSAGNVKLGDFGAS----------KRL---QTICS----SGTGMK 165

Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                +  T ++ +PEVI G G+    D+WSVGC +VE+ T
Sbjct: 166 S----VTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLT 202

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 93.6 bits (233), Expect = 1e-21
 Identities = 79/331 (23%), Positives = 132/331 (39%), Gaps = 91/331 (27%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMI---EIEVLQQLAKHDKGGN 158
           +G G+FG V E  + +  +  A+K V      +  +EA      EI +L +L +H     
Sbjct: 8   LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKL-QHPN--- 63

Query: 159 RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             VQ        +++ I  E + G SL   L+K  Y SFP  ++R   RQ+L  + ++HD
Sbjct: 64  -IVQYLGTEREEDNLYIFLELVPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYLHD 120

Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
              +H D+K  N+L+ ++  +K+ D+  +              KS               
Sbjct: 121 RNTVHRDIKGANILVDTNGVVKLADFGMAKQ-----VVEFSFAKS--------------- 160

Query: 278 PDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
                   + ++ APEVI   G +    DIWS+GC ++E+ TG+  +   E +  +  + 
Sbjct: 161 -----FKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIG 215

Query: 337 R--VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           R   L P+P H+                        S E           ++ I++    
Sbjct: 216 RSKELPPIPDHL------------------------SDE----------AKDFILK---- 237

Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPF 425
                       L+ DP+ R TA E L HPF
Sbjct: 238 -----------CLQRDPSLRPTAAELLEHPF 257

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 93.3 bits (232), Expect = 1e-21
 Identities = 64/233 (27%), Positives = 103/233 (44%), Gaps = 37/233 (15%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHD 154
            +K+  K+G+G++G V +       +  A+K V      +K RE A+ EI +L  +   +
Sbjct: 1   DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN 60

Query: 155 KGGNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNY--RSFPIDLVREIARQLLEC 211
                 +  +  F   N +CIV E      L   + K     +  P   +  I  QLL  
Sbjct: 61  -----IISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRG 115

Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           +  +H+  ++H DLK  N+LLV+++ +K+ D   S          K + K+ A   I   
Sbjct: 116 LQALHEQKILHRDLKSANILLVANDLVKIGDLGIS----------KVLKKNMAKTQI--- 162

Query: 272 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
                         T HY APEV  G  ++Y  DIWS+GC+L E+ T    F+
Sbjct: 163 -------------GTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFE 202

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 94.1 bits (234), Expect = 2e-21
 Identities = 87/359 (24%), Positives = 155/359 (43%), Gaps = 79/359 (22%)

Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREAAMIEIEVLQQLAK 152
           +L SRY     +G G+ G V    D +  + VA+K IV    +  + A+ EI+++++L  
Sbjct: 2   DLGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRL-D 60

Query: 153 HD-----------KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLV 201
           HD            G +    + +  +  + + IV E + + L + L +        +  
Sbjct: 61  HDNIVKVYEVLGPSGSDLTEDVGSLTELNS-VYIVQEYMETDLANVLEQG---PLSEEHA 116

Query: 202 REIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPK 261
           R    QLL  + ++H   ++H DLKP NV + + + +                       
Sbjct: 117 RLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLV----------------------- 153

Query: 262 SSAIKVIDFGSTTYERPD---QNYI---VSTRHYRAPEVILG-LGWTYPCDIWSVGCILV 314
              +K+ DFG      P    + Y+   + T+ YR+P ++L    +T   D+W+ GCI  
Sbjct: 154 ---LKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFA 210

Query: 315 ELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHA-----EKYVRRGRLDWPEGA 369
           E+ TG+ LF     LE    M+ +L  +P  +++  DR+        +VR       +G 
Sbjct: 211 EMLTGKPLFAGAHELE---QMQLILESVP--VVREEDRNELLNVIPSFVRN------DGG 259

Query: 370 ASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
             R  ++ ++            V+  A D    L+ +L ++P DRLTA EAL HP+ + 
Sbjct: 260 EPRRPLRDLLP----------GVNPEALD---FLEQILTFNPMDRLTAEEALMHPYMSC 305

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 92.7 bits (231), Expect = 3e-21
 Identities = 84/341 (24%), Positives = 140/341 (41%), Gaps = 97/341 (28%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           YK   K+GEG  G+V +  DR   + VAIK +R  K+ +E  + EI +++   KH     
Sbjct: 21  YKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDC-KHP---- 75

Query: 159 RCVQIRNWFD---YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVRE----IARQLLE 210
               I +++D     + + +V E + G SL D + +N      + +       + R++L+
Sbjct: 76  ---NIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQN-----FVRMNEPQIAYVCREVLQ 127

Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++H   +IH D+K +N+LL                  KD S          +K+ DF
Sbjct: 128 GLEYLHSQNVIHRDIKSDNILL-----------------SKDGS----------VKLADF 160

Query: 271 G---STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 327
           G     T E+  +N +V T ++ APEVI    +    DIWS+G + +E+  GE       
Sbjct: 161 GFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGE------- 213

Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
                          P ++               R   P  A    + K    +P L+N 
Sbjct: 214 ---------------PPYL---------------REP-PLRALFLITTK---GIPPLKNP 239

Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                +  + +    L   L  DP  R +A E L+HPF  +
Sbjct: 240 -----EKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKK 275

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 93.6 bits (233), Expect = 4e-21
 Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 43/225 (19%)

Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L  I  +H   +IH DLKP N+++ S                 D +          +K
Sbjct: 126 QMLCGIKHLHSAGIIHRDLKPSNIVVKS-----------------DCT----------LK 158

Query: 267 VIDFG-----STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 321
           ++DFG      T++      Y+V TR+YRAPEVILG+G+    DIWSVGCI+ E+  G  
Sbjct: 159 ILDFGLARTAGTSFMMTP--YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTV 215

Query: 322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVR-RGRLDWPEGAASRESIKSVMK 380
           LF   ++++    +   LG      + R+      YV  R +     G +  E    V+ 
Sbjct: 216 LFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKY---AGYSFEELFPDVLF 272

Query: 381 LPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 425
            P  ++    H    A     LL  +L  DP  R++  +AL+HP+
Sbjct: 273 PPDSES----HNKLKASQARDLLSKMLVIDPEKRISVDDALQHPY 313

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 92.5 bits (230), Expect = 7e-21
 Identities = 92/360 (25%), Positives = 157/360 (43%), Gaps = 88/360 (24%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERK--EMVAIKIVRGI---KKYREAAMIEIEVLQQLAK 152
           RY++  ++G+G +G V    + E    E VAIK +  +   K   + A+ E+++L+    
Sbjct: 1   RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRG 60

Query: 153 HDKGGNRCVQIRNWFDYR-------NHICIVFEKLGSSLYDFLRKN------NYRSFPID 199
           H         I   +D         N + +  E + + L+  +R        +++SF   
Sbjct: 61  HK-------NITCLYDMDIVFPGNFNELYLYEELMEADLHQIIRSGQPLTDAHFQSF--- 110

Query: 200 LVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM 259
                  Q+L  + ++H   ++H DLKP N LLV+++                       
Sbjct: 111 -----IYQILCGLKYIHSANVLHRDLKPGN-LLVNAD----------------------- 141

Query: 260 PKSSAIKVIDFG-STTY-ERPDQN--YI---VSTRHYRAPEVILGL-GWTYPCDIWSVGC 311
                +K+ DFG +  + E P +N  ++   V+TR YRAPE++L    +T   D+WSVGC
Sbjct: 142 ---CELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGC 198

Query: 312 ILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRV-DRHAEKYVRRGRLDWPEGAA 370
           IL EL   + +F+  + ++ L  + +VLG   +  L R+    A+ Y+R   L       
Sbjct: 199 ILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIR--SLPNIPK-- 254

Query: 371 SRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
                            I  + +  A D   LL+ LL +DPT R++  EAL HP+    H
Sbjct: 255 --------KPFES----IFPNANPLALD---LLEKLLAFDPTKRISVEEALEHPYLAIWH 299

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 86.9 bits (216), Expect = 3e-19
 Identities = 81/348 (23%), Positives = 133/348 (38%), Gaps = 108/348 (31%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ----LAK 152
             + +   +G+G+FG+V +  D+   ++VAIK++       E A  EIE +QQ    L++
Sbjct: 1   ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVID-----LEEAEDEIEDIQQEIQFLSQ 55

Query: 153 HDKGGNRCVQIRNWF-----DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIAR 206
                 R   I  ++       +  + I+ E   G S  D L+           +  I R
Sbjct: 56  C-----RSPYITKYYGSFLKGSK--LWIIMEYCGGGSCLDLLK---PGKLDETYIAFILR 105

Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           ++L  + ++H+   IH D+K  N+LL                            +   +K
Sbjct: 106 EVLLGLEYLHEEGKIHRDIKAANILLS---------------------------EEGDVK 138

Query: 267 VIDFG------STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 320
           + DFG      ST  +R   N  V T  + APEVI   G+    DIWS+G   +EL  GE
Sbjct: 139 LADFGVSGQLTSTMSKR---NTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGE 195

Query: 321 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK 380
                   L  L  M RVL  +P++    ++ +  K+ +  +                  
Sbjct: 196 P------PLSDLHPM-RVLFLIPKNNPPSLEGN--KFSKPFK------------------ 228

Query: 381 LPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                            D   L    L  DP +R +A+E L+H F  +
Sbjct: 229 -----------------DFVSL---CLNKDPKERPSAKELLKHKFIKK 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 87.0 bits (215), Expect = 4e-19
 Identities = 85/328 (25%), Positives = 141/328 (42%), Gaps = 56/328 (17%)

Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAA----MIEIEVLQQLAKHDKGGNR 159
           K+GEGT+  V +   +    +VA+K +R   ++ E A    + E+ +L+ L KH      
Sbjct: 13  KLGEGTYATVYKGRSKLTDNLVALKEIR--LEHEEGAPCTAIREVSLLKDL-KHAN---- 65

Query: 160 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
            V + +       + +VFE L   L  +L  +   S  +  V+    QLL  + + H   
Sbjct: 66  IVTLHDIIHTEKSLTLVFEYLDKDLKQYL-DDCGNSINMHNVKLFLFQLLRGLNYCHRRK 124

Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           ++H DLKP+N+L+     +K+ D+               + ++ +I      + TY    
Sbjct: 125 VLHRDLKPQNLLINERGELKLADFG--------------LARAKSIP-----TKTYSNE- 164

Query: 280 QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 338
               V T  YR P+++LG   ++   D+W VGCI  E+ TG  LF      E L  + R+
Sbjct: 165 ----VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRI 220

Query: 339 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 398
           LG   +                    WP G  S E  KS        + +  H      D
Sbjct: 221 LGTPTEET------------------WP-GILSNEEFKSYNYPKYRADCLHNHAPRLDSD 261

Query: 399 LTHLLQGLLRYDPTDRLTAREALRHPFF 426
              LL  LL+++   R++A EA++HP+F
Sbjct: 262 GAELLSKLLQFEGRKRISAEEAMKHPYF 289

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 86.3 bits (214), Expect = 6e-19
 Identities = 89/342 (26%), Positives = 142/342 (41%), Gaps = 71/342 (20%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVLQQLAKHD 154
           YK   K+GEG++  V +   +   ++VA+K +R   ++ E     A+ E  +L+ L KH 
Sbjct: 7   YKKLDKLGEGSYATVYKGRSKLTGQLVALKEIR--LEHEEGAPFTAIREASLLKDL-KH- 62

Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                 V + +    +  + +VFE L + L  ++         +  VR    QLL  +A+
Sbjct: 63  ---ANIVTLHDIIHTKKTLTLVFEYLDTDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAY 118

Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 271
            H   ++H DLKP+N LL+S                          +   +K+ DFG   
Sbjct: 119 CHQRRVLHRDLKPQN-LLIS--------------------------ERGELKLADFGLAR 151

Query: 272 -----STTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQT 325
                S TY     N +V T  YR P+V+LG   ++   D+W VGCI  E+ TG  LF  
Sbjct: 152 AKSVPSKTY----SNEVV-TLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPG 206

Query: 326 HEN-LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL 384
             +  + L  + RVLG   +     V  + E          P    +          PRL
Sbjct: 207 STDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINH--------APRL 258

Query: 385 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             +              L    L+Y+P  R++A EA++HP+F
Sbjct: 259 DRIP---------HGEELALKFLQYEPKKRISAAEAMKHPYF 291

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 85.9 bits (212), Expect = 2e-18
 Identities = 66/221 (29%), Positives = 99/221 (44%), Gaps = 32/221 (14%)

Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+               + +++   
Sbjct: 131 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG--------------LARTACT- 175

Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
             +F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ EL  G  +FQ  
Sbjct: 176 --NFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225

Query: 327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 386
           ++++    +   LG      + R+      YV   R  +P    S E +      P    
Sbjct: 226 DHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYV-ENRPQYP--GISFEELFPDWIFPSES- 281

Query: 387 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
              +           LL  +L  DP  R++  EALRHP+ T
Sbjct: 282 ---ERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYIT 319

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 85.4 bits (212), Expect = 3e-18
 Identities = 75/349 (21%), Positives = 125/349 (35%), Gaps = 80/349 (22%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAA-MIEIEVLQQLAK 152
             +++   +G G FG+V    D++  ++ A+K++R    IK+ + A    E ++L     
Sbjct: 1   DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDIL----- 55

Query: 153 HDKGGNRCVQIRN-W-------FDYRNHICIVFEKLGSSLYDFLRK-NNYRSFPIDLVRE 203
                       + W       F    H+ +V E +     D +        FP +  R 
Sbjct: 56  --------ADADSPWIVKLYYSFQDEEHLYLVMEYMPGG--DLMNLLIRKDVFPEETARF 105

Query: 204 IARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFK--RM 259
              +L+  +  +H L  IH D+KP+N+L+ +  +IK+ D+     ++  KD  Y+     
Sbjct: 106 YIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSH 165

Query: 260 PKSSAIKVIDFGSTTYERP-DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                  V+       +R    N  V T  Y APEV+ G  +   CD WS+G IL E+  
Sbjct: 166 NLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLY 225

Query: 319 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSV 378
           G   F                    Q    ++                            
Sbjct: 226 GFPPF---------------YSDTLQETYNKIINW------------------------- 245

Query: 379 MKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT-AREALRHPFF 426
                 ++L        + +   L+  LL  DP DRL    E   HPFF
Sbjct: 246 -----KESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFF 288

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 83.4 bits (206), Expect = 5e-18
 Identities = 66/226 (29%), Positives = 110/226 (48%), Gaps = 36/226 (15%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVR----GIK-KYREAAMI-----EIEVLQQLAKHD 154
           +G G+FG V    +    E++A+K V         K R+ +M+     EI +L++L +H+
Sbjct: 8   IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKEL-QHE 66

Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                 VQ        +H+ I  E + G S+   L  NNY +F   LVR   RQ+L+ + 
Sbjct: 67  N----IVQYLGSSLDADHLNIFLEYVPGGSVAALL--NNYGAFEETLVRNFVRQILKGLN 120

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H+  +IH D+K  N+L+ +   IK+ D+  S          K++  +S         T
Sbjct: 121 YLHNRGIIHRDIKGANILVDNKGGIKISDFGIS----------KKLEANSLS-----TKT 165

Query: 274 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
              RP    +  +  + APEV+    +T   DIWS+GC++VE+ TG
Sbjct: 166 NGARPS---LQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTG 208

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 82.7 bits (205), Expect = 6e-18
 Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 38/226 (16%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           + I  K+GEG++G V +   +E  ++VAIK+V  +++  +  + EI +L+Q         
Sbjct: 5   FDILEKLGEGSYGSVYKAIHKETGQVVAIKVVP-VEEDLQEIIKEISILKQ-CDSP---- 58

Query: 159 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             V+    +     + IV E  G  S+ D ++  N ++   + +  I  Q L+ + ++H 
Sbjct: 59  YIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHS 117

Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST--T 274
              IH D+K  N+LL                            +    K+ DFG S   T
Sbjct: 118 NKKIHRDIKAGNILL---------------------------NEEGQAKLADFGVSGQLT 150

Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 320
                +N ++ T  + APEVI  +G+    DIWS+G   +E+  G+
Sbjct: 151 DTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGK 196

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 81.0 bits (200), Expect = 3e-17
 Identities = 68/310 (21%), Positives = 109/310 (35%), Gaps = 90/310 (29%)

Query: 121 RKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL 180
           + +M+A   V  +K  R   MI+ E                ++   F  ++++ +V E L
Sbjct: 31  KSDMIAKNQVTNVKAERAIMMIQGE-----------SPYVAKLYYSFQSKDYLYLVMEYL 79

Query: 181 -GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIK 239
            G      ++       P D  ++   +++  +  +H   +IH D+KPEN+L+  + ++K
Sbjct: 80  NGGDCASLIKTLGG--LPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLK 137

Query: 240 VPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLG 299
           + D+  S           R                 E       V T  Y APE ILG+G
Sbjct: 138 LTDFGLS-----------RN--------------GLENKK---FVGTPDYLAPETILGVG 169

Query: 300 WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVR 359
                D WS+GC++ E   G   F                   P  +   +         
Sbjct: 170 DDKMSDWWSLGCVIFEFLFGYPPFHAET---------------PDAVFDNIL-------- 206

Query: 360 RGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA-- 417
             R++WPE      S       P   +LI +               LL  DP  RL A  
Sbjct: 207 SRRINWPEEVKEFCS-------PEAVDLINR---------------LLCMDPAKRLGANG 244

Query: 418 -REALRHPFF 426
            +E   HPFF
Sbjct: 245 YQEIKSHPFF 254

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 81.3 bits (200), Expect = 7e-17
 Identities = 68/225 (30%), Positives = 106/225 (47%), Gaps = 44/225 (19%)

Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 172

Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 173 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221

Query: 327 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 384
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 222 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 268

Query: 385 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPF 425
             +L     +H+   A     LL  +L  DP  R++  EAL+HP+
Sbjct: 269 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPY 313

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 79.2 bits (195), Expect = 2e-16
 Identities = 85/335 (25%), Positives = 143/335 (42%), Gaps = 67/335 (20%)

Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIV-----RGI--KKYREAAMIEIEVLQQLAKHDKG 156
           K+GEG++  V +   R   ++VA+K++      G+     REA+++         K  K 
Sbjct: 12  KLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLL---------KGLKH 62

Query: 157 GNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 216
            N  V + +    +  +  VFE + + L  ++ ++     P + VR    QLL  +A++H
Sbjct: 63  AN-IVLLHDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYN-VRLFMFQLLRGLAYIH 120

Query: 217 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTY 275
              ++H DLKP+N+L+                     SY         +K+ DFG +   
Sbjct: 121 GQHILHRDLKPQNLLI---------------------SYL------GELKLADFGLARAK 153

Query: 276 ERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQ-THENLEH 331
             P Q Y   V T  YR P+V+LG   ++   DIW  GCI +E+  G+  F    +  E 
Sbjct: 154 SIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQ 213

Query: 332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH 391
           L  +  VLG   +     V +    Y     L   +    R   K + + P+ ++L  Q 
Sbjct: 214 LEKIWTVLGVPTEDTWPGVSK-LPNYKPEWFL-PCKPQQLRVVWKRLSRPPKAEDLASQ- 270

Query: 392 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
                         +L   P DR++A++AL HP+F
Sbjct: 271 --------------MLMMFPKDRISAQDALLHPYF 291

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 79.7 bits (196), Expect = 2e-16
 Identities = 68/221 (30%), Positives = 105/221 (47%), Gaps = 36/221 (16%)

Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 179

Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+  G  LF   
Sbjct: 180 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228

Query: 327 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRL 384
           ++++    ++E++  P P+ M K++      YV     + P+ A  S E +   +  P  
Sbjct: 229 DHIDQWNKVIEQLGTPCPEFM-KKLQPTVRTYVE----NRPKYAGYSFEKLFPDVLFPAD 283

Query: 385 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 425
                +H    A     LL  +L  D + R++  EAL+HP+
Sbjct: 284 S----EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 77.8 bits (192), Expect = 3e-16
 Identities = 70/338 (20%), Positives = 121/338 (35%), Gaps = 79/338 (23%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR---EAAMIEIEVLQQLAKH 153
             Y++   +G G    V         E VAIK +  ++K +   +    E++ + Q   H
Sbjct: 1   DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRID-LEKCQTSVDELRKEVQAMSQCN-H 58

Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLR-KNNYRSFPIDLVREIARQLLEC 211
                  V+    F   + + +V   L G SL D ++           ++  + +++L+ 
Sbjct: 59  PN----VVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKG 114

Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY--KSSLHTPKDSSYFKRMPKSSAIKVID 269
           + ++H    IH D+K  N+LL     +K+ D+   +SL    D +   R           
Sbjct: 115 LEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVR----------- 163

Query: 270 FGSTTYERPDQNYIVSTRHYRAPEVI-LGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 328
                         V T  + APEV+    G+ +  DIWS G   +EL TG A +  +  
Sbjct: 164 -----------KTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPP 212

Query: 329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 388
           ++   +M  +    P           +KY            + R+ I             
Sbjct: 213 MK--VLMLTLQNDPPSL---ETGADYKKY----------SKSFRKMISLC---------- 247

Query: 389 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
                             L+ DP+ R TA E L+H FF
Sbjct: 248 ------------------LQKDPSKRPTAEELLKHKFF 267

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 77.2 bits (191), Expect = 7e-16
 Identities = 76/339 (22%), Positives = 130/339 (38%), Gaps = 95/339 (28%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHD 154
           ++    +G G+FG+V+    +   +  A+KI+    I K ++   +  E  +LQ + +H 
Sbjct: 3   FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSI-RHP 61

Query: 155 KGGNRCVQIRNWF-DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
                 V +   F D  N + +V E + G  L+  LRK+    FP  + R  A Q++  +
Sbjct: 62  ----FLVNLYGSFQDDSN-LYLVMEYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLAL 114

Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
            ++H L +++ DLKPEN+LL S  Y                           IK+ DFG 
Sbjct: 115 EYLHSLDIVYRDLKPENLLLDSDGY---------------------------IKITDFGF 147

Query: 273 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 332
               +     +  T  Y APE+IL  G+    D W++G ++ E+  G   F        +
Sbjct: 148 AKRVKGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDD---NPI 204

Query: 333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 392
            + E++L                     G++ +P                          
Sbjct: 205 QIYEKILE--------------------GKVRFP-----------------------SFF 221

Query: 393 DHSAGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 426
                D   L++ LL+ D T RL        +   HP+F
Sbjct: 222 S---PDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWF 257

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 77.0 bits (189), Expect = 1e-15
 Identities = 82/330 (24%), Positives = 145/330 (43%), Gaps = 60/330 (18%)

Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAA----MIEIEVLQQLAKHDKGGNR 159
           K+GEGT+  V +   +  + +VA+K +R   ++ E A    + E+ +L+ L KH      
Sbjct: 13  KLGEGTYATVFKGRSKLTENLVALKEIR--LEHEEGAPCTAIREVSLLKDL-KHAN---- 65

Query: 160 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRK-NNYRSFPIDLVREIARQLLECIAFMHDL 218
            V + +       + +VFE L   L  ++    N  S  +  V+    Q+L  +A+ H  
Sbjct: 66  IVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGNIMS--MHNVKIFLYQILRGLAYCHRR 123

Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
            ++H DLKP+N+L+     +K+ D+          +  K +P           + TY   
Sbjct: 124 KVLHRDLKPQNLLINERGELKLADF--------GLARAKSVP-----------TKTYSNE 164

Query: 279 DQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 337
                V T  YR P+V+LG   ++   D+W VGCI  E+ +G  LF      + L ++ R
Sbjct: 165 -----VVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFR 219

Query: 338 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHSA 396
           +LG   +                    WP G +S +  K+    P+ +   ++ H     
Sbjct: 220 LLGTPTEE------------------TWP-GISSNDEFKN-YNFPKYKPQPLINHAPRLD 259

Query: 397 GDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
            +   LL   L+Y+   R++A EA++H +F
Sbjct: 260 TEGIELLTKFLQYESKKRISAEEAMKHAYF 289

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 77.0 bits (189), Expect = 1e-15
 Identities = 88/354 (24%), Positives = 152/354 (42%), Gaps = 75/354 (21%)

Query: 104 KMGEGTFGQVLECWDRERKEM--VAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCV 161
           K+G GT+G V +   ++ K+    A+K + G      +A  EI +L++L    K  N   
Sbjct: 8   KVGRGTYGHVYKAKRKDGKDEKEYALKQIEG-TGISMSACREIALLREL----KHPNVIA 62

Query: 162 QIRNWFDYRNH-ICIVFEKLGSSLYDFLR-----KNNYR--SFPIDLVREIARQLLECIA 213
             + +  + +  + ++F+     L+  ++     K N +    P  +V+ +  Q+L+ I 
Sbjct: 63  LQKVFLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIH 122

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-S 272
           ++H   ++H DLKP N+L++                          P+   +K+ D G +
Sbjct: 123 YLHANWVLHRDLKPANILVMGEG-----------------------PERGRVKIADMGFA 159

Query: 273 TTYERP-----DQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTH 326
             +  P     D + +V T  YRAPE++LG   +T   DIW++GCI  EL T E +F   
Sbjct: 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219

Query: 327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ- 385
           +        E +    P H   ++DR           DW       E I+ + + P LQ 
Sbjct: 220 Q--------EDIKTSNPFHH-DQLDRIFSVMGFPADKDW-------EDIRKMPEYPTLQK 263

Query: 386 -------------NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
                          + +H       +  LLQ LL  DPT R+T+ +AL+ P+F
Sbjct: 264 DFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 76.7 bits (188), Expect = 1e-15
 Identities = 83/333 (24%), Positives = 152/333 (45%), Gaps = 51/333 (15%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYRE--AAMIEIEVLQQLAKHDKG 156
           Y+   K+GEG++  V +   +   ++VA+K++R  ++      A+ E  +L+ L KH   
Sbjct: 7   YEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGL-KHAN- 64

Query: 157 GNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 216
               V + +    +  + +VFE + + L  ++ K+     P + V+    QLL  ++++H
Sbjct: 65  ---IVLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHP-ENVKLFLFQLLRGLSYIH 120

Query: 217 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 276
              ++H DLKP+N+L+  +  +K+ D+               + ++ ++      S TY 
Sbjct: 121 QRYILHRDLKPQNLLISDTGELKLADFG--------------LARAKSVP-----SHTYS 161

Query: 277 RPDQNYIVSTRHYRAPEVILGLGWTYPC-DIWSVGCILVELCTGEALFQTHENLE-HLAM 334
                  V T  YR P+V+LG      C D+W VGCI VE+  G A F   ++++  L  
Sbjct: 162 NE-----VVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLER 216

Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           +  VLG   +     V               P     R ++ S   L +  N  + +V+H
Sbjct: 217 IFLVLGTPNEDTWPGVH------------SLPHFKPERFTLYSPKNLRQAWNK-LSYVNH 263

Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
           +      L   LL+  P +RL+A+ AL H +F+
Sbjct: 264 A----EDLASKLLQCFPKNRLSAQAALSHEYFS 292

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 75.5 bits (185), Expect = 5e-15
 Identities = 88/349 (25%), Positives = 151/349 (43%), Gaps = 65/349 (18%)

Query: 104 KMGEGTFGQVLECWDRERKEM--VAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCV 161
           K+G GT+G V +   ++ K+    A+K + G      +A  EI +L++L KH       +
Sbjct: 8   KVGRGTYGHVYKAKRKDGKDDRDYALKQIEG-TGISMSACREIALLREL-KHPN----VI 61

Query: 162 QIRNWF--DYRNHICIVFEKLGSSLYDFLR-----KNNYR--SFPIDLVREIARQLLECI 212
            ++  F       + ++F+     L+  ++     K N +    P  +V+ +  Q+L+ I
Sbjct: 62  SLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGI 121

Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG- 271
            ++H   ++H DLKP N+L++                          P+   +K+ D G 
Sbjct: 122 HYLHANWVLHRDLKPANILVMGEG-----------------------PERGRVKIADMGF 158

Query: 272 STTYERP-----DQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQT 325
           +  +  P     D + +V T  YRAPE++LG   +T   DIW++GCI  EL T E +F  
Sbjct: 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218

Query: 326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR-- 383
            +        E +    P H   ++DR           DW +     E   ++MK  R  
Sbjct: 219 RQ--------EDIKTSNPYHH-DQLDRIFNVMGFPADKDWEDIKKMPEH-STLMKDFRRN 268

Query: 384 ------LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
                 L   + +H         HLLQ LL  DP  R+T+ +A++ P+F
Sbjct: 269 TYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 74.1 bits (183), Expect = 5e-15
 Identities = 53/236 (22%), Positives = 87/236 (36%), Gaps = 55/236 (23%)

Query: 100 KIHSKMGEGTFGQVLECW----DRERKEMVAIKIVRGIKKYREAAMI--EIEVLQQLAKH 153
            +  K+GEG FG+V +         ++  VA+K ++     ++      E  ++++L  H
Sbjct: 2   TLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKL-DH 60

Query: 154 D-----KGGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIAR 206
                  G   C +          + IV E    G  L D+LRKN  +   +  +   A 
Sbjct: 61  PNIVKLLGV--CTE-------EEPLMIVMEYMPGGD-LLDYLRKNRPKELSLSDLLSFAL 110

Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+   + ++     IH DL   N L V    +                          +K
Sbjct: 111 QIARGMEYLESKNFIHRDLAARNCL-VGENLV--------------------------VK 143

Query: 267 VIDFGSTTYERPDQNYIVSTRH--YR--APEVILGLGWTYPCDIWSVGCILVELCT 318
           + DFG +     D  Y V       R  APE +    +T   D+WS G +L E+ T
Sbjct: 144 ISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFT 199

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 74.3 bits (183), Expect = 5e-15
 Identities = 74/336 (22%), Positives = 130/336 (38%), Gaps = 83/336 (24%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI--EIEVLQQLAKHD 154
             Y++  ++G GT+G V +  D    E+VAIK+++ ++   +  +I  EI +L++  +H 
Sbjct: 3   EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIK-LEPGDDFEIIQQEISMLKE-CRH- 59

Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                 V     +  R+ + IV E   G SL D  +           +  + R+ L+ +A
Sbjct: 60  ---PNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTR-GPLSELQIAYVCRETLKGLA 115

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H+   IH D+K  N+LL     +K+ D+  S      ++  KR               
Sbjct: 116 YLHETGKIHRDIKGANILLTEDGDVKLADFGVS--AQLTATIAKR--------------- 158

Query: 274 TYERPDQNYIVSTRHYRAPEVI---LGLGWTYPCDIWSVGCILVELCTGE-ALFQTHENL 329
                     + T ++ APEV       G+   CDIW++G   +EL   +  +F  H   
Sbjct: 159 -------KSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLH--- 208

Query: 330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM 389
               M  R L  +                                 KS    P+L++   
Sbjct: 209 ---PM--RALFLIS--------------------------------KSNFPPPKLKD--- 228

Query: 390 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 425
              +  +      ++  L  DP  R TA + L+HPF
Sbjct: 229 --KEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 74.8 bits (184), Expect = 6e-15
 Identities = 70/268 (26%), Positives = 111/268 (41%), Gaps = 67/268 (25%)

Query: 167 FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDL 225
           F+ + H+C+V E + G      L+  N  + P+D+ R    + +  + ++H+  ++H DL
Sbjct: 70  FETKRHLCMVMEYVEGGDCATLLK--NIGALPVDMARMYFAETVLALEYLHNYGIVHRDL 127

Query: 226 KPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
           KP+N+L+ S  +IK+ D+   K  L +   + Y   + K            T E  D+  
Sbjct: 128 KPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKD-----------TREFLDKQ- 175

Query: 283 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 342
           +  T  Y APEVIL  G+  P D W++G IL E   G   F                G  
Sbjct: 176 VCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPF---------------FGDT 220

Query: 343 PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL 402
           P+ +  +        V    ++WPEG  +         LP               D   L
Sbjct: 221 PEELFGQ--------VISDDIEWPEGDEA---------LP--------------ADAQDL 249

Query: 403 LQGLLRYDPTDRL---TAREALRHPFFT 427
           +  LLR +P +RL    A E  +H FF 
Sbjct: 250 ISRLLRQNPLERLGTGGAFEVKQHRFFL 277

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 73.7 bits (182), Expect = 7e-15
 Identities = 62/301 (20%), Positives = 107/301 (35%), Gaps = 82/301 (27%)

Query: 100 KIHSKMGEGTFGQVLECW----DRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKH 153
           ++  K+GEG FG+V +          +  VA+K ++    ++ RE  + E  ++++L  H
Sbjct: 2   ELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKL-SH 60

Query: 154 DK-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIAR 206
                  G   C Q          + IV E    G  L DFLRK+      +  + ++A 
Sbjct: 61  PNIVRLLGV--CTQ-------GEPLYIVTEYMPGGD-LLDFLRKHG-EKLTLKDLLQMAL 109

Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+ + + ++     +H DL   N L+             +L                 +K
Sbjct: 110 QIAKGMEYLESKNFVHRDLAARNCLV-----------TENLV----------------VK 142

Query: 267 VIDFGSTTYERPDQNYIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 321
           + DFG +     D  Y           + APE +    +T   D+WS G +L E+ T   
Sbjct: 143 ISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGE 202

Query: 322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG-RLDWPEGAASRESIKSVMK 380
                              P P    + V     + +  G RL  PE     + +  +M 
Sbjct: 203 Q------------------PYPGMSNEEV----LELLEDGYRLPRPENCP--DELYELML 238

Query: 381 L 381
            
Sbjct: 239 Q 239

Length = 258

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 73.9 bits (181), Expect = 7e-15
 Identities = 68/273 (24%), Positives = 124/273 (45%), Gaps = 39/273 (14%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMIEIEVLQQL 150
           + +++   +G+G FG+V  C+D +    +A+K V+         K   A   EI++L+ L
Sbjct: 2   TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNL 61

Query: 151 AKHDKGGNRCVQIRNWF-DYRNHICIVFEKL--GSSLYDFLRKNNYRSFPIDLVREIARQ 207
                   R VQ      D       +F +   G S+ D L+  +Y +   ++ R+  RQ
Sbjct: 62  LHE-----RIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLK--SYGALTENVTRKYTRQ 114

Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           +LE ++++H   ++H D+K  N+L  S   +K+ D+ +S          KR+      + 
Sbjct: 115 ILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGAS----------KRL------QT 158

Query: 268 IDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 327
           I    T  +      +  T ++ +PEVI G G+    DIWSVGC +VE+ T +  +   E
Sbjct: 159 ICLSGTGMKS-----VTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFE 213

Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
            +   A+ +    P    +   V  H   +++R
Sbjct: 214 AMA--AIFKIATQPTNPVLPPHVSDHCRDFLKR 244

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 74.7 bits (184), Expect = 8e-15
 Identities = 78/347 (22%), Positives = 130/347 (37%), Gaps = 94/347 (27%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHD 154
           ++I +++G+G +GQV     ++  E+VA+K +    + K  E   +  E ++L    K +
Sbjct: 3   FQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTT-TKSE 61

Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                 V++   F    ++ +  E + G      L  NN      D  R    ++ E + 
Sbjct: 62  ----WLVKLLYAFQDDEYLYLAMEYVPGGDFRTLL--NNLGVLSEDHARFYMAEMFEAVD 115

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
            +H+L  IH DLKPEN L+ +S +IK+                            DFG +
Sbjct: 116 ALHELGYIHRDLKPENFLIDASGHIKL---------------------------TDFGLS 148

Query: 274 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF------QTHE 327
                  N +V +  Y APEV+ G G+ +  D WS+GC+L E   G   F      +T E
Sbjct: 149 KGIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWE 208

Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           NL++                               L  P     R ++            
Sbjct: 209 NLKYWKET---------------------------LQRPVYDDPRFNLS----------- 230

Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR-HPFFTRDHLRR 433
                D +   +T L+      DP+ R  + E ++ HPFF       
Sbjct: 231 -----DEAWDLITKLIN-----DPSRRFGSLEDIKNHPFFKEVDWNE 267

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 73.4 bits (181), Expect = 1e-14
 Identities = 57/246 (23%), Positives = 103/246 (41%), Gaps = 44/246 (17%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREAAMI--EIEVLQQLAKHDK 155
           Y++   +G+G+FG V +   +   +++  K I  G    +E   +  E+ +L++L KH  
Sbjct: 2   YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILREL-KHPN 60

Query: 156 GGNRCVQIRNWF-DYRNH-ICIVFEKLG----SSLYDFLRKNNYRSFPIDLVREIARQLL 209
                V+  +   D  N  + IV E       + L    +K   +    + +  I  QLL
Sbjct: 61  ----IVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKER-KYIEEEFIWRILTQLL 115

Query: 210 ECIAFMHDLC-----MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             +   H+       ++H DLKP N+ L ++  +K+ D+  +          K +   S 
Sbjct: 116 LALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLA----------KILGHDS- 164

Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
                  + TY        V T +Y +PE +  + +    DIWS+GC++ ELC     F 
Sbjct: 165 -----SFAKTY--------VGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFT 211

Query: 325 THENLE 330
               L+
Sbjct: 212 ARNQLQ 217

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 73.1 bits (179), Expect = 1e-14
 Identities = 66/252 (26%), Positives = 108/252 (42%), Gaps = 33/252 (13%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIE-VLQQLAKHDKG 156
           +Y +   +GEG+FG+ L        +  A+K +R  K          E VL    KH   
Sbjct: 1   QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPN- 59

Query: 157 GNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
               V  +  F+   H+ IV E   G  L   ++    + FP D + +   Q+   +  +
Sbjct: 60  ---IVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHI 116

Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H+  ++H D+K +N+ L  +  +K+ D+ S+       +Y                + TY
Sbjct: 117 HEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAY----------------ACTY 160

Query: 276 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH--ENLEHLA 333
                   V T +Y  PE+   + +    DIWS+GCIL ELCT +  FQ +  +NL  L 
Sbjct: 161 --------VGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLI-LK 211

Query: 334 MMERVLGPLPQH 345
           + +    PLP H
Sbjct: 212 VCQGSYKPLPSH 223

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 72.9 bits (179), Expect = 1e-14
 Identities = 60/236 (25%), Positives = 101/236 (42%), Gaps = 43/236 (18%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK---IVRGIKKYREAAMIEIEVLQQLAKHD 154
           +Y    K+GEG+FG+ +    +E  +   IK   I +   K RE +  E+ VL  + KH 
Sbjct: 1   KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNM-KHP 59

Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                 VQ +  F+   ++ IV +   G  LY  +       FP D + +   Q+   + 
Sbjct: 60  N----IVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALK 115

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-- 271
            +HD  ++H D+K +N+ L                            K   IK+ DFG  
Sbjct: 116 HVHDRKILHRDIKSQNIFLT---------------------------KDGTIKLGDFGIA 148

Query: 272 ---STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
              ++T E       + T +Y +PE+     +    DIW++GC+L E+CT +  F+
Sbjct: 149 RVLNSTVEL--ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFE 202

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 72.7 bits (178), Expect = 2e-14
 Identities = 84/335 (25%), Positives = 128/335 (38%), Gaps = 83/335 (24%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKH 153
           RY +  ++G+G+FG V    D++      +K+++ I        E      E  Q L+K 
Sbjct: 1   RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEA-QLLSKL 59

Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLR--KNNYRSFPIDLVREIARQLLE 210
           D      V+    F  R+  CI+ E   G  L   L   K+  ++   + V E   QLL 
Sbjct: 60  DHPA--IVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLL 117

Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + +MH   ++H DLK +N+ L  +  +K+ D+  S           R+   S     D 
Sbjct: 118 GVHYMHQRRILHRDLKAKNIFL-KNNLLKIGDFGVS-----------RLLMGSC----DL 161

Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
            +T            T +Y +PE +   G+    DIWS+GCIL E+C     F+    L 
Sbjct: 162 ATT---------FTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS 212

Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
              ++  V GP P                      PE               R  N IMQ
Sbjct: 213 --VVLRIVEGPTPS--------------------LPE------------TYSRQLNSIMQ 238

Query: 391 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 425
                          +L  DP+ R +A E LR+PF
Sbjct: 239 S--------------MLNKDPSLRPSAAEILRNPF 259

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 72.5 bits (178), Expect = 3e-14
 Identities = 79/343 (23%), Positives = 128/343 (37%), Gaps = 83/343 (24%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLA 151
            N    ++I  ++G+G FG+V +   +E     A KI++   ++  E  M+EI++L +  
Sbjct: 1   VNPNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSEC- 59

Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
           KH       V +   + Y N + I+ E       D +     R      +R + RQ+LE 
Sbjct: 60  KHPN----IVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEA 115

Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           + F+H   +IH DLK  N+LL     +K+ D+  S                         
Sbjct: 116 LNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVS------------------------A 151

Query: 272 STTYERPDQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGEALFQTH 326
                   ++  + T ++ APEV+         + Y  DIWS+G  L+EL   E     H
Sbjct: 152 KNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEP---PH 208

Query: 327 ENLEHLAMMERVL-GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 385
             L  + ++ ++L    P                   LD P   +S              
Sbjct: 209 HELNPMRVLLKILKSEPPT------------------LDQPSKWSS-------------- 236

Query: 386 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                            L+  L  DP DR TA E L+HPF + 
Sbjct: 237 ------------SFNDFLKSCLVKDPDDRPTAAELLKHPFVSD 267

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 72.0 bits (176), Expect = 4e-14
 Identities = 68/269 (25%), Positives = 123/269 (45%), Gaps = 47/269 (17%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMIEIEVLQQLAKHDKGGN 158
           +G+G FG+V  C+D +    +A K V+         K   A   EI++L+ L +H+    
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNL-QHE---- 64

Query: 159 RCVQIRNWFDYRNH----ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
           R VQ       R+     + I  E + G S+ D L+   Y +    + R+  RQ+LE ++
Sbjct: 65  RIVQYYGCL--RDRAEKTLTIFMEYMPGGSVKDQLKA--YGALTESVTRKYTRQILEGMS 120

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H   ++H D+K  N+L  S+  +K+ D+ +S          KR+      + I    T
Sbjct: 121 YLHSNMIVHRDIKGANILRDSAGNVKLGDFGAS----------KRL------QTICMSGT 164

Query: 274 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 333
                    +  T ++ +PEVI G G+    D+WS+GC +VE+ T +  +  +E +  + 
Sbjct: 165 GIRS-----VTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIF 219

Query: 334 MM--ERVLGPLPQHMLKRVDRHAEKYVRR 360
            +  +     LP H    +  HA  ++  
Sbjct: 220 KIATQPTNPQLPSH----ISEHARDFLGC 244

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 72.0 bits (177), Expect = 4e-14
 Identities = 71/340 (20%), Positives = 121/340 (35%), Gaps = 98/340 (28%)

Query: 103 SKMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
            ++G G  G V +   R   +++A+K +R    +  ++  + E+++L           +C
Sbjct: 7   GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILH----------KC 56

Query: 161 -----VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
                V     F     I I  E +     D + K      P  ++ +IA  +L+ + ++
Sbjct: 57  NSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYL 116

Query: 216 H-DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           H    +IH D+KP N+L+ S   IK+ D+  S           ++  S A          
Sbjct: 117 HEKHKIIHRDVKPSNILVNSRGQIKLCDFGVS----------GQLVNSLA---------- 156

Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                    V T  Y APE I G  ++   DIWS+G  L+EL T                
Sbjct: 157 ------KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELAT---------------- 194

Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL------PRLQNLI 388
                                     GR  +P      + I  +++       PRL +  
Sbjct: 195 --------------------------GRFPYPPENDPPDGIFELLQYIVNEPPPRLPS-- 226

Query: 389 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                  + D    +   L  DP +R + +E L HPF  +
Sbjct: 227 ----GKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKK 262

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 71.7 bits (176), Expect = 4e-14
 Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 33/218 (15%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIV---RGIKKYREAAMIEIEVLQQLAKHDKGGNRCV 161
           +G+G FG+       E   +V  K V   R  +K R  A+ EI +L  L +H       +
Sbjct: 8   LGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLL-QHPN----II 62

Query: 162 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
              N F   N + I  E   G +LYD + +   + F  ++V     Q++  ++++H   +
Sbjct: 63  AYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGI 122

Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 280
           +H D+K  N+ L  +  IK+ D+  S    K       M ++                  
Sbjct: 123 LHRDIKTLNIFLTKAGLIKLGDFGIS----KILGSEYSMAET------------------ 160

Query: 281 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
             +V T +Y +PE+  G+ + +  DIW++GC+L EL T
Sbjct: 161 --VVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLT 196

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 72.8 bits (179), Expect = 4e-14
 Identities = 62/237 (26%), Positives = 105/237 (44%), Gaps = 34/237 (14%)

Query: 106 GEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ-------LAKHDKGGN 158
           G G FG+V     ++   + A+K +R      ++ M+E E +         LA+ D    
Sbjct: 10  GRGAFGEVRLVQKKDTGHIYAMKKLR------KSEMLEKEQVAHVRAERDILAEAD--NP 61

Query: 159 RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVR-EIARQLLECIAFMH 216
             V++   F   N++ ++ E L G  +   L K    +F  +  R  IA  +L  I  +H
Sbjct: 62  WVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMK--KDTFTEEETRFYIAETIL-AIDSIH 118

Query: 217 DLCMIHTDLKPENVLLVSSEYIKVPDYK--SSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            L  IH D+KP+N+LL +  +IK+ D+   + L     + +++ +  +     +DF S  
Sbjct: 119 KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKP 178

Query: 275 YERPD--QNY----------IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                  + +           V T  Y APEV L  G+   CD WS+G I+ E+  G
Sbjct: 179 MSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 71.4 bits (175), Expect = 6e-14
 Identities = 71/248 (28%), Positives = 106/248 (42%), Gaps = 53/248 (21%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G+GT+G V    D   +  +AIK +   +  R    +  E+   L  + K  N  VQ  
Sbjct: 16  LGKGTYGIVYAARDLSTQVRIAIKEIP-ERDSRYVQPLHEEIA--LHSYLKHRN-IVQYL 71

Query: 165 NWFDYRNHICIVFEKL-GSSLYDFLR------KNNYRSFPIDLVREIARQLLECIAFMHD 217
                     I  E++ G SL   LR      K+N        +    +Q+LE + ++HD
Sbjct: 72  GSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNE-----QTIIFYTKQILEGLKYLHD 126

Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
             ++H D+K +NVL+                    ++Y      S  +K+ DFG  T +R
Sbjct: 127 NQIVHRDIKGDNVLV--------------------NTY------SGVVKISDFG--TSKR 158

Query: 278 -----PDQNYIVSTRHYRAPEVI-LGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                P       T  Y APEVI  G  G+  P DIWS+GC +VE+ TG+  F   E  E
Sbjct: 159 LAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPF--IELGE 216

Query: 331 HLAMMERV 338
             A M +V
Sbjct: 217 PQAAMFKV 224

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 71.0 bits (174), Expect = 7e-14
 Identities = 38/161 (23%), Positives = 81/161 (50%), Gaps = 26/161 (16%)

Query: 192 NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSS-EYIKVPDYKSSLHTP 250
            Y +F   ++     QLL  ++++H+  +IH D+K  N+L+ S+ + +++ D+       
Sbjct: 96  KYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADF------- 148

Query: 251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVG 310
                       +A ++   G+   E   Q  ++ T  + APEV+ G  +   CD+WSVG
Sbjct: 149 -----------GAAARLAAKGTGAGEFQGQ--LLGTIAFMAPEVLRGEQYGRSCDVWSVG 195

Query: 311 CILVELCTGEALFQTHENLEHLAMMERVLG-----PLPQHM 346
           C+++E+ T +  +   ++  HLA++ ++        +P+H+
Sbjct: 196 CVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHL 236

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 71.0 bits (174), Expect = 8e-14
 Identities = 78/340 (22%), Positives = 128/340 (37%), Gaps = 96/340 (28%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMI-----EIEVLQQLAKH 153
           +G+GT+G+V    +    EM+A+K V       G    R+  M+     EIE L+ L   
Sbjct: 9   IGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHL 68

Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
           +      VQ   +     ++ I  E + G S+   LR   Y  F   LVR    Q+LE +
Sbjct: 69  N-----IVQYLGFETTEEYLSIFLEYVPGGSIGSCLR--TYGRFEEQLVRFFTEQVLEGL 121

Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
           A++H   ++H DLK +N+L+ +    K+ D+  S  +                       
Sbjct: 122 AYLHSKGILHRDLKADNLLVDADGICKISDFGISKKS----------------------D 159

Query: 273 TTYERPDQNYIVSTRHYRAPEVI--LGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
             Y+      +  +  + APEVI     G++   DIWS+GC+++E+  G    +   + E
Sbjct: 160 DIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGR---RPWSDEE 216

Query: 331 HLAMM-----ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 385
            +A M     +R   P+P  +   +               P                   
Sbjct: 217 AIAAMFKLGNKRSAPPIPPDVSMNLS--------------PVAL---------------- 246

Query: 386 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 425
                            L      +P +R TARE L+HPF
Sbjct: 247 ---------------DFLNACFTINPDNRPTARELLQHPF 271

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 70.8 bits (173), Expect = 1e-13
 Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 35/224 (15%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR-EAAMIEIEVLQQLAKHDKGG 157
           ++I  ++G+G FG+V +  ++E   + A K++    +   E  M+EIE+L          
Sbjct: 14  WEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHP---- 69

Query: 158 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
              V++   F +   + I+ E       D +     R      ++ I RQ+LE + ++H 
Sbjct: 70  -YIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHS 128

Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
           + +IH DLK  NVLL     IK+ D+  S    K                      T +R
Sbjct: 129 MKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVK----------------------TLQR 166

Query: 278 PDQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVEL 316
            D    + T ++ APEV++        + Y  DIWS+G  L+E+
Sbjct: 167 RDS--FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 208

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 70.2 bits (172), Expect = 2e-13
 Identities = 68/332 (20%), Positives = 129/332 (38%), Gaps = 85/332 (25%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYR--EAAMIEIEVLQQLAKHDKGGNRC 160
           +G+G FG+V  C  +   +M A K +  + +KK +  + A+ E ++L++++         
Sbjct: 1   LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSR-----FI 55

Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V +   F+ ++ +C+V   + G  L   +       FP       A Q++  +  +H   
Sbjct: 56  VSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR 115

Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +++ DLKPENVLL     +++ D   ++                       G     R  
Sbjct: 116 IVYRDLKPENVLLDDHGNVRISDLGLAVELKG-------------------GKKIKGR-- 154

Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 339
                 T  Y APEV+ G  + +  D +++GC L E+  G + F+  +            
Sbjct: 155 ----AGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRK------------ 198

Query: 340 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 399
                   ++V++   K               R +++  ++ P          D  + + 
Sbjct: 199 --------EKVEKEELK---------------RRTLEMAVEYP----------DKFSPEA 225

Query: 400 THLLQGLLRYDPTDRL-----TAREALRHPFF 426
             L + LL+ DP  RL     +A E   HP F
Sbjct: 226 KDLCEALLQKDPEKRLGCRGGSADEVREHPLF 257

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 69.7 bits (170), Expect = 2e-13
 Identities = 62/224 (27%), Positives = 109/224 (48%), Gaps = 39/224 (17%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIV------RGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           +G G FG+V  C+D +    +A+K V      +   K   A   EI++L+ L +HD    
Sbjct: 10  LGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL-RHD---- 64

Query: 159 RCVQ----IRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           R VQ    +R+  + +  I + +   G S+ D L+   Y +   ++ R   RQ+L+ +++
Sbjct: 65  RIVQYYGCLRDPEEKKLSIFVEYMP-GGSIKDQLKA--YGALTENVTRRYTRQILQGVSY 121

Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H   ++H D+K  N+L  S+  +K+ D+ +S          KR      I+ I    T 
Sbjct: 122 LHSNMIVHRDIKGANILRDSAGNVKLGDFGAS----------KR------IQTICMSGTG 165

Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
            +      +  T ++ +PEVI G G+    D+WSV C +VE+ T
Sbjct: 166 IKS-----VTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLT 204

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 69.5 bits (170), Expect = 2e-13
 Identities = 59/234 (25%), Positives = 100/234 (42%), Gaps = 43/234 (18%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGI-KKYREAAMIEIEVLQQLAKHDK 155
           ++I +K+G+G+FG V +   +  K + A+K +    + ++ RE A+ E  VL +L     
Sbjct: 2   FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKL----- 56

Query: 156 GGNRCVQIRNW--FDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
             +    IR +  F  +  + IV E      L+  L+    R  P D V     Q+L  +
Sbjct: 57  --DSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGL 114

Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
           A +H   ++H D+K  N+ L    Y  V                         K+ D G 
Sbjct: 115 AHLHSKKILHRDIKSLNLFL--DAYDNV-------------------------KIGDLGV 147

Query: 273 TTYERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 323
                 + N+   IV T +Y +PE+     +    D+W++G +L E CTG+  F
Sbjct: 148 AKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPF 201

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 69.2 bits (170), Expect = 3e-13
 Identities = 64/264 (24%), Positives = 109/264 (41%), Gaps = 74/264 (28%)

Query: 96  TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD- 154
           T  +++   +GEGT+G+V +   ++  ++VAIKI+  I+   E    E  +L++ + H  
Sbjct: 5   TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPN 64

Query: 155 ---------KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDF---LRKNNYRSFPIDLV 201
                    K        + W         V E   G S+ D    LRK   +    + +
Sbjct: 65  IATFYGAFIKKNPPGNDDQLWL--------VMELCGGGSVTDLVKGLRKKG-KRLKEEWI 115

Query: 202 REIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPK 261
             I R+ L  +A++H+  +IH D+K +N+LL                            K
Sbjct: 116 AYILRETLRGLAYLHENKVIHRDIKGQNILLT---------------------------K 148

Query: 262 SSAIKVIDFG------STTYERPDQNYIVSTRHYRAPEVI-----LGLGWTYPCDIWSVG 310
           ++ +K++DFG      ST   R   N  + T ++ APEVI         +    D+WS+G
Sbjct: 149 NAEVKLVDFGVSAQLDSTLGRR---NTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLG 205

Query: 311 CILVELCTGE----------ALFQ 324
              +EL  G+          ALF+
Sbjct: 206 ITAIELADGKPPLCDMHPMRALFK 229

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 68.8 bits (168), Expect = 4e-13
 Identities = 66/250 (26%), Positives = 109/250 (43%), Gaps = 40/250 (16%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ---LAKHDKGGNRCV 161
           +G+G +G V  C    + +++A+K V        AA  E E LQ+   L K  K  N   
Sbjct: 8   LGKGAYGTVY-CGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQ 66

Query: 162 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
            +    D  N I I  E + G S+   L  N +   P  +  +  +Q+L+ +A++H+ C+
Sbjct: 67  YLGTCLD-DNTISIFMEFVPGGSISSIL--NRFGPLPEPVFCKYTKQILDGVAYLHNNCV 123

Query: 221 IHTDLKPENVLLVSSEYIKVPDYK-------SSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           +H D+K  NV+L+ +  IK+ D+          LH    S+  K M              
Sbjct: 124 VHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTH-SNMLKSMH------------- 169

Query: 274 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 333
                       T ++ APEVI   G+    DIWS+GC + E+ TG+    + + L  + 
Sbjct: 170 -----------GTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMF 218

Query: 334 MMERVLGPLP 343
            +    G +P
Sbjct: 219 YIGAHRGLMP 228

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 69.3 bits (169), Expect = 4e-13
 Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 35/224 (15%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR-EAAMIEIEVLQQLAKHDKGG 157
           ++I  ++G+G FG+V +  ++E   + A K++    +   E  M+EI++L      +   
Sbjct: 7   WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN--- 63

Query: 158 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
              V++ + F Y N++ I+ E       D +     R      +R + +Q LE + ++H+
Sbjct: 64  --IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHE 121

Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
             +IH DLK  N+L      IK+ D+  S    +                      T +R
Sbjct: 122 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR----------------------TIQR 159

Query: 278 PDQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVEL 316
            D    + T ++ APEV++        + Y  D+WS+G  L+E+
Sbjct: 160 RDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 201

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 68.3 bits (168), Expect = 6e-13
 Identities = 54/236 (22%), Positives = 88/236 (37%), Gaps = 56/236 (23%)

Query: 100 KIHSKMGEGTFGQVLECW----DRERKEMVAIKIVRGIKKYREAAMI--EIEVLQQLAKH 153
            +  K+GEG FG+V +        ++K  VA+K ++     ++      E  ++++L  H
Sbjct: 2   TLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKL-DH 60

Query: 154 D-----KGGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIAR 206
                  G   C +          + IV E  + G  L  +LRKN  +    DL+   A 
Sbjct: 61  PNVVKLLGV--CTE-------EEPLYIVMEYMEGGD-LLSYLRKNRPKLSLSDLL-SFAL 109

Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+   + ++     IH DL   N L V    +                          +K
Sbjct: 110 QIARGMEYLESKNFIHRDLAARNCL-VGENLV--------------------------VK 142

Query: 267 VIDFGSTTYERPDQNYIVSTRH--YR--APEVILGLGWTYPCDIWSVGCILVELCT 318
           + DFG +     D  Y         R  APE +    +T   D+WS G +L E+ T
Sbjct: 143 ISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFT 198

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 68.2 bits (167), Expect = 7e-13
 Identities = 60/227 (26%), Positives = 96/227 (42%), Gaps = 40/227 (17%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHD 154
           +KI  K+G+G F  V +        +VA+K V+       K R+  + EI++L+QL  H 
Sbjct: 4   FKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL-DHP 62

Query: 155 KGGNRCVQIRNWFDYRNHICIVFE-----KLGSSLYDFLRKNNYRSFPIDLVREIARQLL 209
                 ++    F   N + IV E      L   +  F  K   R  P   + +   QL 
Sbjct: 63  N----VIKYLASFIENNELNIVLELADAGDLSRMIKHF--KKQKRLIPERTIWKYFVQLC 116

Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
             +  MH   ++H D+KP NV + ++  +K+ D               R           
Sbjct: 117 SALEHMHSKRIMHRDIKPANVFITATGVVKLGDLG-----------LGRF---------- 155

Query: 270 FGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 316
           F S T      + +V T +Y +PE I   G+ +  DIWS+GC+L E+
Sbjct: 156 FSSKTTA---AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 67.8 bits (165), Expect = 9e-13
 Identities = 83/330 (25%), Positives = 131/330 (39%), Gaps = 87/330 (26%)

Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           ++G+G+FG+V +  D   KE+VAIKI+       E A  EIE +QQ        +     
Sbjct: 11  RIGKGSFGEVYKGIDNRTKEVVAIKIID-----LEEAEDEIEDIQQEITVLSQCDSPYIT 65

Query: 164 RNWFDY--RNHICIVFEKLGS-SLYDFLRKNNYRSFPID--LVREIARQLLECIAFMHDL 218
           R +  Y     + I+ E LG  S  D L+       P++   +  I R++L+ + ++H  
Sbjct: 66  RYYGSYLKGTKLWIIMEYLGGGSALDLLKPG-----PLEETYIATILREILKGLDYLHSE 120

Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
             IH D+K  NVLL     +K+ D+  +                        G  T  + 
Sbjct: 121 RKIHRDIKAANVLLSEQGDVKLADFGVA------------------------GQLTDTQI 156

Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 338
            +N  V T  + APEVI    + +  DIWS+G   +EL  GE     + +L  +    RV
Sbjct: 157 KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEP---PNSDLHPM----RV 209

Query: 339 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 398
           L  +P++                                    P L+    Q+    +  
Sbjct: 210 LFLIPKN----------------------------------SPPTLEG---QY----SKP 228

Query: 399 LTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
               ++  L  DP  R TA+E L+H F TR
Sbjct: 229 FKEFVEACLNKDPRFRPTAKELLKHKFITR 258

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 67.9 bits (166), Expect = 2e-12
 Identities = 75/334 (22%), Positives = 125/334 (37%), Gaps = 94/334 (28%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRC---- 160
           +G+GTFG+V+   ++   +  A+KI++     +E  + + EV   L +     N      
Sbjct: 3   LGKGTFGKVILVREKATGKYYAMKILK-----KEVIIAKDEVAHTLTESRVLQNTRHPFL 57

Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
             ++  F   + +C V E   G  L+  L +   R F  D  R    +++  + ++H   
Sbjct: 58  TALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSCD 115

Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +++ DLK EN++L    +IK+ D+               + K      I  G+T      
Sbjct: 116 VVYRDLKLENLMLDKDGHIKITDFG--------------LCKEG----ISDGATM----- 152

Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMMER 337
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 153 -KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE 211

Query: 338 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 397
           +                                         + PR   L        + 
Sbjct: 212 I-----------------------------------------RFPR--TL--------SP 220

Query: 398 DLTHLLQGLLRYDPTDRL-----TAREALRHPFF 426
           +   LL GLL+ DP  RL      A+E + H FF
Sbjct: 221 EAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFF 254

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 69.0 bits (168), Expect = 2e-12
 Identities = 68/261 (26%), Positives = 123/261 (47%), Gaps = 36/261 (13%)

Query: 92  GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAM-IEIEVLQ 148
           GE+  + Y++  K+G G FG+V     +  +E    K +  RG+K+  ++ + IE+ V++
Sbjct: 8   GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMR 67

Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPI------DLVR 202
           +L KH        +  N  + + +I + F   G      L +N  + + +        + 
Sbjct: 68  EL-KHKNIVRYIDRFLNKANQKLYILMEFCDAGD-----LSRNIQKCYKMFGKIEEHAIV 121

Query: 203 EIARQLLECIAFMHDLC-------MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 255
           +I RQLL  +A+ H+L        ++H DLKP+N+ L  S  I+        H  K ++ 
Sbjct: 122 DITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFL--STGIR--------HIGKITAQ 171

Query: 256 FKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTY--PCDIWSVGC 311
              +      K+ DFG +     +   +  V T +Y +PE++L    +Y    D+W++GC
Sbjct: 172 ANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGC 231

Query: 312 ILVELCTGEALFQTHENLEHL 332
           I+ ELC+G+  F    N   L
Sbjct: 232 IIYELCSGKTPFHKANNFSQL 252

Length = 1021

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 67.3 bits (164), Expect = 2e-12
 Identities = 64/258 (24%), Positives = 116/258 (44%), Gaps = 39/258 (15%)

Query: 105 MGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           +G G+FG+V L  +  E    VAIK     K  ++  +  +   +++  +      CV +
Sbjct: 38  LGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINH-PFCVNL 96

Query: 164 RNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
              F   +++ +V E  +G   + FLR+N  + FP D+    A Q++    ++  L +++
Sbjct: 97  YGSFKDESYLYLVLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQSLNIVY 154

Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
            DLKPEN+LL    +IK+ D+  +                   KV+D  + TY       
Sbjct: 155 RDLKPENLLLDKDGFIKMTDFGFA-------------------KVVD--TRTYT------ 187

Query: 283 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG-------EALFQTHENLEHLAMM 335
           +  T  Y APE++L +G     D W++G  + E+  G       E L    + LE +   
Sbjct: 188 LCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYF 247

Query: 336 ERVLGPLPQHMLKRVDRH 353
            + L    +H++K++  H
Sbjct: 248 PKFLDNNCKHLMKKLLSH 265

Length = 340

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 67.2 bits (164), Expect = 4e-12
 Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 34/204 (16%)

Query: 192 NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHT 249
            Y +F  D+ R    + +  I  +H L  IH D+KP+N+L+    +IK+ D+  S   H 
Sbjct: 94  KYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHK 153

Query: 250 PKDSSYFKRMPKSSAIK---------VIDFGSTTYERPDQ-----------NY-IVSTRH 288
             DS+Y++++ +  + K          +D  + T    DQ            Y  V T  
Sbjct: 154 QHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPD 213

Query: 289 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF---QTHENL-------EHLAMMERV 338
           Y APE+ L  G+   CD WS+G I+ E   G   F    +HE         E L   + +
Sbjct: 214 YIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDI 273

Query: 339 -LGPLPQHMLKRVDRHAEKYVRRG 361
            L    + +++R+  +AE  + RG
Sbjct: 274 HLSVEAEDLIRRLITNAENRLGRG 297

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 66.2 bits (161), Expect = 4e-12
 Identities = 61/222 (27%), Positives = 98/222 (44%), Gaps = 39/222 (17%)

Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ----LAKHDKGGNR 159
           ++G+G+FG+V +  D   +++VAIKI+       E A  EIE +QQ    L++ D     
Sbjct: 11  RIGKGSFGEVFKGIDNRTQQVVAIKIID-----LEEAEDEIEDIQQEITVLSQCDS--PY 63

Query: 160 CVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 218
             +    +     + I+ E LG  S  D LR   +  F I     + +++L+ + ++H  
Sbjct: 64  VTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQI---ATMLKEILKGLDYLHSE 120

Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
             IH D+K  NVLL     +K+ D+  +                        G  T  + 
Sbjct: 121 KKIHRDIKAANVLLSEQGDVKLADFGVA------------------------GQLTDTQI 156

Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 320
            +N  V T  + APEVI    +    DIWS+G   +EL  GE
Sbjct: 157 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 198

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 66.2 bits (161), Expect = 4e-12
 Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 38/262 (14%)

Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+GEG+ G V    ++   + VA+K +   K+ R   +    V+ +   H+      V +
Sbjct: 29  KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHEN----VVDM 84

Query: 164 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
            N +   + + +V E L G +L D +          + +  +   +L  ++++H+  +IH
Sbjct: 85  YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIATVCLSVLRALSYLHNQGVIH 141

Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
            D+K +++LL S   IK+ D+       K                        E P +  
Sbjct: 142 RDIKSDSILLTSDGRIKLSDFGFCAQVSK------------------------EVPKRKS 177

Query: 283 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 342
           +V T ++ APEVI  L +    DIWS+G +++E+  GE     + N   L  M R+   L
Sbjct: 178 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEP---PYFNEPPLQAMRRIRDNL 234

Query: 343 PQHMLKRVDRHAEKYVRRGRLD 364
           P  +    D H    V RG LD
Sbjct: 235 PPRV---KDSHKVSSVLRGFLD 253

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 65.3 bits (159), Expect = 5e-12
 Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 38/255 (14%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---RGIKKYREAAMIEIEVLQQLAKHD 154
           +Y+    +G G FG V  C  +  +++V IK +   +  K  R AA  E +VL+ L+  +
Sbjct: 1   KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPN 60

Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                 ++    F     + IV E   G +L ++++K        D +     Q+L  + 
Sbjct: 61  -----IIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALH 115

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYI-KVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
            +H   ++H DLK +N+LL   + + K+ D+  S                   K++   S
Sbjct: 116 HVHTKLILHRDLKTQNILLDKHKMVVKIGDFGIS-------------------KILSSKS 156

Query: 273 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 332
             Y       +V T  Y +PE+  G  +    DIW++GC+L EL + +  F+   NL  L
Sbjct: 157 KAYT------VVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEA-ANLPAL 209

Query: 333 AM--MERVLGPLPQH 345
            +  M     P+   
Sbjct: 210 VLKIMSGTFAPISDR 224

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 66.2 bits (161), Expect = 7e-12
 Identities = 67/259 (25%), Positives = 116/259 (44%), Gaps = 45/259 (17%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD---KGGNRCV 161
           +G G FG+V      + K + A+K +R     ++  ++  +V    A+ D   +  N  V
Sbjct: 9   LGIGAFGEVCLARKVDTKALYAMKTLR-----KKDVLLRNQVAHVKAERDILAEADNEWV 63

Query: 162 QIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRS-------FPIDLVREIARQLLECIAF 214
            +R ++ +++   + F      + D++   +  S       FP DL R    +L   +  
Sbjct: 64  -VRLYYSFQDKDNLYF------VMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVES 116

Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPD---------------YKSSLHTPKDSSYFKRM 259
           +H +  IH D+KP+N+L+    +IK+ D               Y+S  H  +DS  F   
Sbjct: 117 VHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNE 176

Query: 260 PKSSA-------IKVIDF-GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGC 311
               A       +K ++   +  ++R   + +V T +Y APEV+L  G+T  CD WSVG 
Sbjct: 177 WGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 236

Query: 312 ILVELCTGEALFQTHENLE 330
           IL E+  G+  F     LE
Sbjct: 237 ILYEMLVGQPPFLAQTPLE 255

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 65.0 bits (158), Expect = 1e-11
 Identities = 57/262 (21%), Positives = 114/262 (43%), Gaps = 35/262 (13%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHD 154
           ++ +  +G+G FG+V  C  R   +M A K +  + IKK +  +M   E ++L+++    
Sbjct: 2   FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKV---- 57

Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                 V +   ++ ++ +C+V   + G  L   +       F        A ++   + 
Sbjct: 58  -NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLE 116

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
            +H   +++ DLKPEN+LL    +I++ D   ++H P+  +   R               
Sbjct: 117 DLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR--------------- 161

Query: 274 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 333
                     V T  Y APEV+    +T+  D W++GC+L E+  G++ FQ  +      
Sbjct: 162 ----------VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE 211

Query: 334 MMERVLGPLPQHMLKRVDRHAE 355
            +ER++  + +   ++    A 
Sbjct: 212 EVERLVKEVQEEYSEKFSPDAR 233

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 64.7 bits (158), Expect = 1e-11
 Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 38/226 (16%)

Query: 103 SKMGEGTFGQV-LECWDRER---KEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDKG 156
            ++GEG FG+V L  +D       E VA+K +   G +++R     EIE+L+ L  H+  
Sbjct: 10  KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTL-DHEN- 67

Query: 157 GNRCVQIRNWFD--YRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
               V+ +   +      + ++ E L S SL D+L+++  +     L+   + Q+ + + 
Sbjct: 68  ---IVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLL-FSSQICKGMD 123

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDFGS 272
           ++     IH DL   N+L+ S + +K+ D+  +   P+D  Y+  + P  S I       
Sbjct: 124 YLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIF------ 177

Query: 273 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                           + APE +    ++   D+WS G  L EL T
Sbjct: 178 ----------------WYAPECLRTSKFSSASDVWSFGVTLYELFT 207

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 64.5 bits (158), Expect = 1e-11
 Identities = 54/235 (22%), Positives = 92/235 (39%), Gaps = 54/235 (22%)

Query: 104 KMGEGTFGQVLEC-WDR--ERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGN 158
           K+GEG FG+V +        +   VA+K ++    ++ R+  + E  V+++L  H     
Sbjct: 2   KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKL-GHPN--- 57

Query: 159 RCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKN-NYRSFPI-------DLVREIARQL 208
             V++         + +V E  + G  L D+LRK+      P        DL+   A Q+
Sbjct: 58  -VVRLLGVCTEEEPLYLVLEYMEGGD-LLDYLRKSRPVFPSPEKSTLSLKDLLS-FAIQI 114

Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
            + + ++     +H DL   N L V  + +                          +K+ 
Sbjct: 115 AKGMEYLASKKFVHRDLAARNCL-VGEDLV--------------------------VKIS 147

Query: 269 DFGSTTYERPDQNYIVSTR---HYR--APEVILGLGWTYPCDIWSVGCILVELCT 318
           DFG +     D  Y   T      R  APE +    +T   D+WS G +L E+ T
Sbjct: 148 DFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFT 202

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 64.7 bits (157), Expect = 1e-11
 Identities = 65/230 (28%), Positives = 99/230 (43%), Gaps = 55/230 (23%)

Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ----LAKHDKG--- 156
           K+G+G+FG+V +  D   +++VAIKI+       E A  EIE +QQ    L++ D     
Sbjct: 11  KIGKGSFGEVFKGIDNRTQKVVAIKIID-----LEEAEDEIEDIQQEITVLSQCDSPYVT 65

Query: 157 ---GNRCVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPID--LVREIARQLLE 210
              G+     + W        I+ E LG  S  D L        P+D   +  I R++L+
Sbjct: 66  KYYGSYLKDTKLW--------IIMEYLGGGSALDLLEPG-----PLDETQIATILREILK 112

Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++H    IH D+K  NVLL     +K+ D+  +                        
Sbjct: 113 GLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------------ 148

Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 320
           G  T  +  +N  V T  + APEVI    +    DIWS+G   +EL  GE
Sbjct: 149 GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGE 198

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 64.4 bits (157), Expect = 1e-11
 Identities = 74/327 (22%), Positives = 130/327 (39%), Gaps = 84/327 (25%)

Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+GEG+ G V    D+     VA+K +   K+ R   +    V+ +  +H       V++
Sbjct: 26  KIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPN----IVEM 81

Query: 164 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
            + +   + + +V E L G +L D +          + +  +   +L+ ++F+H   +IH
Sbjct: 82  YSSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIATVCLAVLKALSFLHAQGVIH 138

Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG---STTYERPD 279
            D+K +++LL S                              +K+ DFG     + E P 
Sbjct: 139 RDIKSDSILLTSD---------------------------GRVKLSDFGFCAQVSKEVPR 171

Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 339
           +  +V T ++ APEVI  L +    DIWS+G +++E+  GE     + N   L  M+R+ 
Sbjct: 172 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEP---PYFNEPPLQAMKRIR 228

Query: 340 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 399
             LP  +     ++  K                         PRL++ + +         
Sbjct: 229 DNLPPKL-----KNLHKVS-----------------------PRLRSFLDR--------- 251

Query: 400 THLLQGLLRYDPTDRLTAREALRHPFF 426
                 +L  DP  R TA E L HPF 
Sbjct: 252 ------MLVRDPAQRATAAELLNHPFL 272

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 64.6 bits (158), Expect = 2e-11
 Identities = 63/272 (23%), Positives = 103/272 (37%), Gaps = 61/272 (22%)

Query: 167 FDYRNHICIVFEK-LGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDL 225
           F    ++C+V +   G  L+  L++   +    ++ R  A ++L  + ++H L +++ DL
Sbjct: 70  FQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDL 129

Query: 226 KPENVLLVSSEYIKVPDYKSSLHTP-------KDSSYFKRMPKSSAIKVIDFGSTTYERP 278
           KPEN+LL  S +I + D+  S  +        K      R    ++I    F      R 
Sbjct: 130 KPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFR- 188

Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 338
             N  V T  Y APEVI G G     D W++G +L E+  G   F+              
Sbjct: 189 -SNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFK-------------- 233

Query: 339 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 398
                                        G+   E+  +++K              S+  
Sbjct: 234 -----------------------------GSNRDETFSNILKKEV---TFPGSPPVSS-S 260

Query: 399 LTHLLQGLLRYDPTDRL----TAREALRHPFF 426
              L++ LL  DP+ RL     A E  +HPFF
Sbjct: 261 ARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFF 292

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 64.8 bits (158), Expect = 2e-11
 Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 19/147 (12%)

Query: 196 FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPD------------- 242
           F  DL R    +L   I  +H +  IH D+KP+N+L+    +IK+ D             
Sbjct: 98  FEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157

Query: 243 --YKSSLHTPKDS-SYFKRM--PKSSAIKVID-FGSTTYERPDQNYIVSTRHYRAPEVIL 296
             Y+   H  +DS    +         +K ++      ++R   + +V T +Y APEV+L
Sbjct: 158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLL 217

Query: 297 GLGWTYPCDIWSVGCILVELCTGEALF 323
             G+T  CD WSVG IL E+  G+  F
Sbjct: 218 RTGYTQLCDWWSVGVILYEMLVGQPPF 244

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 64.5 bits (157), Expect = 2e-11
 Identities = 61/251 (24%), Positives = 105/251 (41%), Gaps = 52/251 (20%)

Query: 96  TSRYKIH-----SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEV 146
           TS +K+        +G G+FG+V     +   E  AIK ++  +    K  +    E  +
Sbjct: 12  TSSWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSI 71

Query: 147 LQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIA 205
           L +L+         V +   F   N +  + E  +G  L+  LRK     FP D+ +   
Sbjct: 72  LMELSH-----PFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAG--RFPNDVAKFYH 124

Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 265
            +L+    ++H   +I+ DLKPEN+LL +  ++KV D+           + K++      
Sbjct: 125 AELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDF----------GFAKKV------ 168

Query: 266 KVIDFGSTTYERPDQNY-IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG----- 319
                       PD+ + +  T  Y APEVI   G     D W++G +L E   G     
Sbjct: 169 ------------PDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFF 216

Query: 320 -EALFQTHENL 329
            +  F+ +E +
Sbjct: 217 DDTPFRIYEKI 227

Length = 329

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 64.0 bits (155), Expect = 3e-11
 Identities = 63/246 (25%), Positives = 108/246 (43%), Gaps = 46/246 (18%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-EIEVLQQLAKHDKG 156
           +Y  + K+G+G  G V    D    + VAIK +   K+ ++  +I EI V+++L   +  
Sbjct: 20  KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPN-- 77

Query: 157 GNRCVQIRNWFDYR---NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
                 I N+ D     + + +V E L G SL D + +       I  V    R+ L+ +
Sbjct: 78  ------IVNFLDSFLVGDELFVVMEYLAGGSLTDVVTETCMDEAQIAAV---CRECLQAL 128

Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG- 271
            F+H   +IH D+K +NVLL                               ++K+ DFG 
Sbjct: 129 EFLHANQVIHRDIKSDNVLL---------------------------GMDGSVKLTDFGF 161

Query: 272 --STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 329
               T E+  ++ +V T ++ APEV+    +    DIWS+G + +E+  GE  +     L
Sbjct: 162 CAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL 221

Query: 330 EHLAMM 335
             L ++
Sbjct: 222 RALYLI 227

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 63.2 bits (154), Expect = 3e-11
 Identities = 70/337 (20%), Positives = 131/337 (38%), Gaps = 88/337 (26%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI--EIEVLQQLAKHD 154
           S Y+    +G G +G V          +VA+KI+       + + I  E+ +L QL +  
Sbjct: 1   SLYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQL-RQS 59

Query: 155 KGGNRCVQIRNWFDYRN--HICIVFEKL-GSSLYDFLRKNNYRSFPID--LVREIARQLL 209
           +  N     + +  Y     + I+ E   G S+   ++       PI    +  I R++L
Sbjct: 60  QPPN---ITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAG-----PIAEKYISVIIREVL 111

Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
             + ++H + +IH D+K  N+L+ ++  +K+ D+  +    ++SS  KR           
Sbjct: 112 VALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS--KR----------- 158

Query: 270 FGSTTYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHEN 328
              +T+        V T ++ APEVI  G  +    DIWS+G  + E+ TG   +   + 
Sbjct: 159 ---STF--------VGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDA 207

Query: 329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 388
                   R +  +P+                                   K PRL++  
Sbjct: 208 F-------RAMMLIPKS----------------------------------KPPRLED-- 224

Query: 389 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 425
               +  +  L   +   L  +P +RL+A E L+  +
Sbjct: 225 ----NGYSKLLREFVAACLDEEPKERLSAEELLKSKW 257

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 63.9 bits (155), Expect = 3e-11
 Identities = 76/335 (22%), Positives = 125/335 (37%), Gaps = 94/335 (28%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR----C 160
           +G+GTFG+V+   ++   +  A+KI++     +E  + + EV   L +     N      
Sbjct: 3   LGKGTFGKVILVREKASGKYYAMKILK-----KEVIIAKDEVAHTLTESRVLKNTRHPFL 57

Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
             ++  F  ++ +C V E + G  L+  L +   R F  D  R    +++  + ++H   
Sbjct: 58  TSLKYSFQTKDRLCFVMEYVNGGELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSGK 115

Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +++ DLK EN++L    +IK+ D+        D++  K                      
Sbjct: 116 IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTF-------------------- 155

Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMMER 337
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 156 ----CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMED 211

Query: 338 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 397
           +                                         K PR            + 
Sbjct: 212 I-----------------------------------------KFPRTL----------SA 220

Query: 398 DLTHLLQGLLRYDPTDRL-----TAREALRHPFFT 427
           D   LL GLL  DP  RL      A+E +RH FFT
Sbjct: 221 DAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFT 255

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 63.5 bits (154), Expect = 3e-11
 Identities = 73/326 (22%), Positives = 130/326 (39%), Gaps = 78/326 (23%)

Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+GEG+ G V     +   ++VA+K +   K+ R   +    V+ +  +H+      V++
Sbjct: 27  KIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN----VVEM 82

Query: 164 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
            N +   + + +V E L G +L D +          + +  +   +L+ ++ +H   +IH
Sbjct: 83  YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLKALSVLHAQGVIH 139

Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
            D+K +++LL     +K+ D+       K                        E P +  
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSK------------------------EVPRRKS 175

Query: 283 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 342
           +V T ++ APE+I  L +    DIWS+G +++E+  GE  +     L+ + M+       
Sbjct: 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI------- 228

Query: 343 PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL 402
                              R + P               P+L+NL    V  S   L   
Sbjct: 229 -------------------RDNLP---------------PKLKNL--HKVSPS---LKGF 249

Query: 403 LQGLLRYDPTDRLTAREALRHPFFTR 428
           L  LL  DP  R TA E L+HPF  +
Sbjct: 250 LDRLLVRDPAQRATAAELLKHPFLAK 275

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 63.6 bits (155), Expect = 4e-11
 Identities = 74/338 (21%), Positives = 126/338 (37%), Gaps = 101/338 (29%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR-------EAAMIEIEVLQQLAKHDKGG 157
           +G+G+FG+VL    +   E+ A+K++   KK         E  M E  VL    KH    
Sbjct: 3   LGKGSFGKVLLAELKGTDELYAVKVL---KKDVILQDDDVECTMTEKRVLALAGKHP--- 56

Query: 158 NRCVQIRNWFDYRNHICIVFEKL--GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
               Q+ + F  ++ +  V E +  G  ++   R      F     R  A +++  + F+
Sbjct: 57  -FLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQR---SGRFDEPRARFYAAEIVLGLQFL 112

Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H+  +I+ DLK +NVLL S  +IK+ D+               M K      I  G TT 
Sbjct: 113 HERGIIYRDLKLDNVLLDSEGHIKIADFG--------------MCKEG----ILGGVTT- 153

Query: 276 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLA 333
                +    T  Y APE++    +    D W++G +L E+  G++ F     + L    
Sbjct: 154 -----STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSI 208

Query: 334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 393
           + + V    P+ +                        S+E+                   
Sbjct: 209 LEDEVR--YPRWL------------------------SKEAKS----------------- 225

Query: 394 HSAGDLTHLLQGLLRYDPTDRL----TAREALR-HPFF 426
                   +L+  L  +P  RL    T  + ++ HPFF
Sbjct: 226 --------ILKSFLTKNPEKRLGCLPTGEQDIKGHPFF 255

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 62.8 bits (152), Expect = 5e-11
 Identities = 67/249 (26%), Positives = 114/249 (45%), Gaps = 35/249 (14%)

Query: 100 KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++  K+G+G FG+V +  W+   K  VAIK ++      EA + E +++++L +HDK   
Sbjct: 9   RLDVKLGQGCFGEVWMGTWNGTTK--VAIKTLKPGTMMPEAFLQEAQIMKKL-RHDKLVP 65

Query: 159 RCVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
               +         I IV E +G  SL DFL++ + +   +  + ++A Q+ + +A++  
Sbjct: 66  LYAVVS-----EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIER 120

Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
           +  IH DL+  N+L+  +   K+ D+  +    +D+ Y  R      IK           
Sbjct: 121 MNYIHRDLRAANILVGDNLVCKIADFGLA-RLIEDNEYTARQGAKFPIK----------- 168

Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 336
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 169 -----------WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVE 217

Query: 337 R-VLGPLPQ 344
           R    P PQ
Sbjct: 218 RGYRMPCPQ 226

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 62.3 bits (151), Expect = 6e-11
 Identities = 64/237 (27%), Positives = 106/237 (44%), Gaps = 34/237 (14%)

Query: 104 KMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 162
           K+G G FG+V +  W+   K  VA+K ++      E+ + E +++++L +HDK     VQ
Sbjct: 13  KLGNGQFGEVWMGTWNGNTK--VAVKTLKPGTMSPESFLEEAQIMKKL-RHDK----LVQ 65

Query: 163 IRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 221
           +         I IV E +   SL DFL+    R+  +  + ++A Q+   +A++  +  I
Sbjct: 66  LYAVVS-EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYI 124

Query: 222 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 281
           H DL+  N+L+      K+ D+  +    +D+ Y  R      IK               
Sbjct: 125 HRDLRSANILVGDGLVCKIADFGLA-RLIEDNEYTARQGAKFPIK--------------- 168

Query: 282 YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMER 337
                  + APE  L   +T   D+WS G +L EL T G   +    N E L  +ER
Sbjct: 169 -------WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVER 218

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 62.9 bits (153), Expect = 7e-11
 Identities = 79/335 (23%), Positives = 131/335 (39%), Gaps = 96/335 (28%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAA--MIEIEVLQQLAKHDKGGNRC 160
           +G+G+FG+VL    +   +  A+K++  + I K +E    M E  VL +  KH       
Sbjct: 3   IGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHP----FL 58

Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V +   F   + +  V + + G  L+  L++   RSFP    R  A ++   + ++H L 
Sbjct: 59  VGLHYSFQTADKLYFVLDYVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSLN 116

Query: 220 MIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 276
           +I+ DLKPEN+LL S  ++ + D+   K  +   K +S F   P+               
Sbjct: 117 IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPE--------------- 161

Query: 277 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
                       Y APEV+    +    D W +G +L E+  G   F + +  E   M +
Sbjct: 162 ------------YLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE---MYD 206

Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH-VDHS 395
            +L                                             + L ++  +  S
Sbjct: 207 NILN--------------------------------------------KPLRLKPNISVS 222

Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALR----HPFF 426
           A    HLL+GLL+ D T RL A++       H FF
Sbjct: 223 A---RHLLEGLLQKDRTKRLGAKDDFLEIKNHVFF 254

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 62.3 bits (151), Expect = 8e-11
 Identities = 84/347 (24%), Positives = 134/347 (38%), Gaps = 108/347 (31%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRC 160
           +G+G+FG+V++   R+ + + A+K +R      +      + E  VL Q+         C
Sbjct: 1   IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQV--------NC 52

Query: 161 ---VQIRNWFDYRNHICIVFEKL-GSSLYDFLRK----NNYRSFPIDLVREIARQLLECI 212
              V ++  F     + +V   + G  L+  L++    +  R+      R    +LL  +
Sbjct: 53  PFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRA------RFYTAELLCAL 106

Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
             +H   +I+ DLKPEN+LL         DY+                    I + DFG 
Sbjct: 107 ENLHKFNVIYRDLKPENILL---------DYQGH------------------IALCDFGL 139

Query: 273 TTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 329
                 D    N    T  Y APE++LG G+T   D W++G +L E+ TG          
Sbjct: 140 CKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTG---------- 189

Query: 330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM 389
                       LP    + V+    K ++   L +P+G                     
Sbjct: 190 ------------LPPFYDENVNEMYRKILQE-PLRFPDG--------------------- 215

Query: 390 QHVDHSAGDLTHLLQGLLRYDPTDRL---TAREALRHPFFTRDHLRR 433
              D  A D   LL GLL  DPT RL    A+E   HPFF++   ++
Sbjct: 216 --FDRDAKD---LLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLSWKK 257

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 61.9 bits (150), Expect = 8e-11
 Identities = 57/236 (24%), Positives = 102/236 (43%), Gaps = 58/236 (24%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G GT+GQV +    +  ++ AIK++   +   E   +EI +L++ + H          R
Sbjct: 24  VGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHH----------R 73

Query: 165 NWFDY------------RNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLEC 211
           N   Y             + + +V E  G+ S+ D ++     +   D +  I R++L  
Sbjct: 74  NIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRG 133

Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           +A +H   +IH D+K +NVLL                            +++ +K++DFG
Sbjct: 134 LAHLHAHKVIHRDIKGQNVLLT---------------------------ENAEVKLVDFG 166

Query: 272 -STTYERP--DQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTG 319
            S   +R    +N  + T ++ APEVI         + Y  DIWS+G   +E+  G
Sbjct: 167 VSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEG 222

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 61.5 bits (149), Expect = 1e-10
 Identities = 78/345 (22%), Positives = 134/345 (38%), Gaps = 85/345 (24%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHD 154
           ++ +  +G+G FG+V  C  R   +M A K +  + IKK +  +M   E ++L+++    
Sbjct: 2   FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKV---- 57

Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                 V +   ++ ++ +C+V   + G  L   +       F  +     A ++L  + 
Sbjct: 58  -NSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLE 116

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
            +H    ++ DLKPEN+LL    +I++ D   ++  P+  S   R               
Sbjct: 117 DLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGR--------------- 161

Query: 274 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 333
                     V T  Y APEV+    +T   D W +GC++ E+  G++ F+         
Sbjct: 162 ----------VGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFR--------G 203

Query: 334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 393
             E+V     + + +RV    E Y           A   E  KS+ K+            
Sbjct: 204 RKEKV---KREEVDRRVLETEEVY----------SAKFSEEAKSICKM------------ 238

Query: 394 HSAGDLTHLLQGLLRYDPTDRL-----TAREALRHPFFTRDHLRR 433
                       LL  DP  RL      A E  RHPFF   + +R
Sbjct: 239 ------------LLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFKR 271

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 62.6 bits (152), Expect = 1e-10
 Identities = 75/280 (26%), Positives = 109/280 (38%), Gaps = 84/280 (30%)

Query: 174 CIVFEKLGSSLYDFLRKNNYRSFPIDL--VREIARQLLECIAFMHDLCMIHTDLKPENVL 231
           C+V  K  S LY +L     R  P+ L  V  +ARQLL  I ++H   +IH D+K ENVL
Sbjct: 236 CLVLPKYRSDLYTYLGA---RLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVL 292

Query: 232 LVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER-----PDQNYIVST 286
                          ++ P+D            I + DFG+  + R     P    I  T
Sbjct: 293 ---------------VNGPED------------ICLGDFGAACFARGSWSTPFHYGIAGT 325

Query: 287 RHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA-LFQTHENLEHLAMMERVLGPLPQH 345
               APEV+ G  +T   DIWS G ++ E     A LF      E      ++L      
Sbjct: 326 VDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQIL------ 379

Query: 346 MLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG-------- 397
              R+ R A+ +V     ++P+ A SR              L+ Q+   +A         
Sbjct: 380 ---RIIRQAQVHVD----EFPQHAGSR--------------LVSQYRHRAARNRRPAYTR 418

Query: 398 -----------DLTHLLQGLLRYDPTDRLTAREALRHPFF 426
                      D+ +L+   L +D   R +A E LR P F
Sbjct: 419 PAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLF 458

Length = 461

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 61.7 bits (150), Expect = 1e-10
 Identities = 60/228 (26%), Positives = 94/228 (41%), Gaps = 57/228 (25%)

Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           ++G G+FG V    D    E+VAIK      K   +     E  Q + K  +   +    
Sbjct: 22  EIGHGSFGAVYFARDVRTNEVVAIK------KMSYSGKQSNEKWQDIIKEVRFLQQLRH- 74

Query: 164 RNWFDY-----RNHIC-IVFEK-LGSS--LYDFLRKNNYRSFPIDLVREIA---RQLLEC 211
            N  +Y     R H   +V E  LGS+  + +  +K      P+  V EIA      L+ 
Sbjct: 75  PNTIEYKGCYLREHTAWLVMEYCLGSASDILEVHKK------PLQEV-EIAAICHGALQG 127

Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           +A++H    IH D+K  N+LL                            +   +K+ DFG
Sbjct: 128 LAYLHSHERIHRDIKAGNILLT---------------------------EPGTVKLADFG 160

Query: 272 STTYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVEL 316
           S +   P  ++ V T ++ APEVIL +    +    D+WS+G   +EL
Sbjct: 161 SASLVSPANSF-VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 60.7 bits (147), Expect = 2e-10
 Identities = 59/227 (25%), Positives = 96/227 (42%), Gaps = 43/227 (18%)

Query: 97  SRYKIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK 155
           S   +  ++G G FG V L  W  +RK  VAIK +R      E  + E +V+ +L+    
Sbjct: 4   SELTLVQEIGSGQFGLVWLGYWLEKRK--VAIKTIREGAMSEEDFIEEAQVMMKLSH--- 58

Query: 156 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
              + VQ+      R+ IC+VFE +    L D+LR      F  + +  +   + E +A+
Sbjct: 59  --PKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAY 115

Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +    +IH DL   N L+                            ++  +KV DFG T 
Sbjct: 116 LESSNVIHRDLAARNCLV---------------------------GENQVVKVSDFGMTR 148

Query: 275 YERPDQNYIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVEL 316
           +   DQ Y  ST       + +PEV     ++   D+WS G ++ E+
Sbjct: 149 FVLDDQ-YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEV 194

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 60.4 bits (146), Expect = 2e-10
 Identities = 61/242 (25%), Positives = 101/242 (41%), Gaps = 35/242 (14%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHD 154
           RY+I  K+GEG+FG++     +   E   IK +   K   K +EA+  E+ +L ++ KH 
Sbjct: 1   RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKM-KHP 59

Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                 V     F     + IV E   G  L   + +     F  D +     Q+   + 
Sbjct: 60  N----IVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLK 115

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYI-KVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
            +HD  ++H D+K +N+ L  +  + K+ D+  +     DS                   
Sbjct: 116 HIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIA-RQLNDSMELAYT------------- 161

Query: 273 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 332
                      V T +Y +PE+     +    DIWS+GC+L ELCT +  F+ + NL  L
Sbjct: 162 ----------CVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN-NLHQL 210

Query: 333 AM 334
            +
Sbjct: 211 VL 212

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 61.0 bits (148), Expect = 3e-10
 Identities = 79/335 (23%), Positives = 133/335 (39%), Gaps = 53/335 (15%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           Y +   +  G+ G+V       + + V +KI  G K      +IE  +LQ +  H     
Sbjct: 68  YTVIKTLTPGSEGRVFVATKPGQPDPVVLKI--GQKG---TTLIEAMLLQNV-NHPS--- 118

Query: 159 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 218
             +++++        C+V     S LY +L K + R  PID    I +Q+LE + ++H  
Sbjct: 119 -VIRMKDTLVSGAITCMVLPHYSSDLYTYLTKRS-RPLPIDQALIIEKQILEGLRYLHAQ 176

Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
            +IH D+K EN+ +   + + + D  ++           + P      V+         P
Sbjct: 177 RIIHRDVKTENIFINDVDQVCIGDLGAA-----------QFP------VVA--------P 211

Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 338
               +  T    APEV+    +    DIWS G +L E+    A   T          E V
Sbjct: 212 AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEML---AYPSTIFEDPPSTPEEYV 268

Query: 339 LGPLPQHMLKRVDR---HAEKYVRRGRLDWPEGAASRESIK--SVMKLPRLQNLIMQHVD 393
                 H+LK +     H E++ R      P     R  I+  S+ + P  +    Q V+
Sbjct: 269 KSC-HSHLLKIISTLKVHPEEFPRD-----PGSRLVRGFIEYASLERQPYTRYPCFQRVN 322

Query: 394 -HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
               G+   L+  +L +D   R +A E L +P F 
Sbjct: 323 LPIDGEF--LVHKMLTFDAAMRPSAEEILNYPMFA 355

Length = 357

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 60.5 bits (147), Expect = 3e-10
 Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 46/225 (20%)

Query: 103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLA-----KHDKGG 157
           S++GEG  G V +C  +    + A+K +           ++ ++L++L      K     
Sbjct: 7   SRLGEGAGGSVTKCRLKNTGMIFALKTI----TTDPNPDLQKQILRELEINKSCKSP--- 59

Query: 158 NRCVQIRNWF--DYRNHICIVFEKLGS----SLYDFLRKNNYRSFPIDLVREIARQLLEC 211
              V+    F  +  + I I  E        S+Y  ++K   R     L + IA  +L+ 
Sbjct: 60  -YIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGK-IAESVLKG 117

Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           ++++H   +IH D+KP N+LL     +K+ D+  S                   ++++  
Sbjct: 118 LSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSG------------------ELVNSL 159

Query: 272 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 316
           + T+          T  Y APE I G  ++   D+WS+G  L+E+
Sbjct: 160 AGTF--------TGTSFYMAPERIQGKPYSITSDVWSLGLTLLEV 196

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 60.0 bits (145), Expect = 4e-10
 Identities = 59/235 (25%), Positives = 103/235 (43%), Gaps = 38/235 (16%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAK 152
           + ++I  K+G G F +V        ++ VA+K V+  +    K R+  + EI++L+QL  
Sbjct: 2   ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNH 61

Query: 153 HDKGGNRCVQIRNWFDYRNHICIVFEKLG----SSLYDFLRKNNYRSFPIDLVREIARQL 208
            +      ++  + F   N + IV E       S +  + +K   R  P   V +   QL
Sbjct: 62  PN-----VIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQK-RLIPERTVWKYFVQL 115

Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
              +  MH   ++H D+KP NV + ++  +K+ D               R          
Sbjct: 116 CSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLG-----------LGRF--------- 155

Query: 269 DFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 323
            F S T      + +V T +Y +PE I   G+ +  DIWS+GC+L E+   ++ F
Sbjct: 156 -FSSKTTA---AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 206

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 60.1 bits (145), Expect = 4e-10
 Identities = 61/246 (24%), Positives = 107/246 (43%), Gaps = 46/246 (18%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-EIEVLQQLAKHDKG 156
           +Y    K+G+G  G V    D    + VAIK +   ++ ++  +I EI V+++       
Sbjct: 20  KYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRE------- 72

Query: 157 GNRCVQIRNWFDYR---NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
            N+   I N+ D     + + +V E L G SL D + +       I  V    R+ L+ +
Sbjct: 73  -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQAL 128

Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG- 271
            F+H   +IH D+K +N+LL                               ++K+ DFG 
Sbjct: 129 DFLHSNQVIHRDIKSDNILL---------------------------GMDGSVKLTDFGF 161

Query: 272 --STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 329
               T E+  ++ +V T ++ APEV+    +    DIWS+G + +E+  GE  +     L
Sbjct: 162 CAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL 221

Query: 330 EHLAMM 335
             L ++
Sbjct: 222 RALYLI 227

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 60.8 bits (147), Expect = 4e-10
 Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 23/151 (15%)

Query: 196 FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK--SSLHTPKDS 253
           FP  L R    +L   I  +H +  IH D+KP+N+L+    +IK+ D+   +      +S
Sbjct: 98  FPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNS 157

Query: 254 SYFKR--------MPKS------SAIKVIDFGSTTYERPDQNY-------IVSTRHYRAP 292
            Y+++        M  S      S  +  D   T  +R  + +       +V T +Y AP
Sbjct: 158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAP 217

Query: 293 EVILGLGWTYPCDIWSVGCILVELCTGEALF 323
           EV+L  G+T  CD WSVG IL E+  G+  F
Sbjct: 218 EVLLRKGYTQLCDWWSVGVILFEMLVGQPPF 248

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 59.7 bits (144), Expect = 5e-10
 Identities = 60/246 (24%), Positives = 107/246 (43%), Gaps = 46/246 (18%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-EIEVLQQLAKHDKG 156
           +Y    K+G+G  G V    D    + VAI+ +   ++ ++  +I EI V+++       
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE------- 73

Query: 157 GNRCVQIRNWFDYR---NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
            N+   I N+ D     + + +V E L G SL D + +       I  V    R+ L+ +
Sbjct: 74  -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQAL 129

Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG- 271
            F+H   +IH D+K +N+LL                               ++K+ DFG 
Sbjct: 130 EFLHSNQVIHRDIKSDNILL---------------------------GMDGSVKLTDFGF 162

Query: 272 --STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 329
               T E+  ++ +V T ++ APEV+    +    DIWS+G + +E+  GE  +     L
Sbjct: 163 CAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL 222

Query: 330 EHLAMM 335
             L ++
Sbjct: 223 RALYLI 228

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 59.4 bits (144), Expect = 8e-10
 Identities = 68/257 (26%), Positives = 105/257 (40%), Gaps = 54/257 (21%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G+G+FG+V               +VR I       +  ++VL++     +   R    R
Sbjct: 4   LGQGSFGKVF--------------LVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMER 49

Query: 165 NWFDYRNHICIV-----FEKLGSSLY---DFLRKNNYRS-------FPIDLVREIARQLL 209
           +     NH  IV     F+  G  LY   DFLR  +  +       F  + V+    +L 
Sbjct: 50  DILAEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELA 108

Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
             +  +H L +I+ DLKPEN+LL    +IK+ D+  S    K+S              ID
Sbjct: 109 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS----KES--------------ID 150

Query: 270 FGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 329
                Y          T  Y APEV+   G T   D WS G ++ E+ TG   FQ  +  
Sbjct: 151 HEKKAYS------FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK 204

Query: 330 EHLAMMERVLGPLPQHM 346
           E + M+ +    +PQ +
Sbjct: 205 ETMTMILKAKLGMPQFL 221

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 59.0 bits (143), Expect = 8e-10
 Identities = 52/227 (22%), Positives = 100/227 (44%), Gaps = 35/227 (15%)

Query: 100 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDKGG 157
           +  S +G G  G V +        ++A K+V        R+  + E++++     H+   
Sbjct: 8   ETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIM-----HECRS 62

Query: 158 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
              V     F   N+IC+  E +     D + K      P++++ +IA  ++E + ++++
Sbjct: 63  PYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKK-GGPIPVEILGKIAVAVVEGLTYLYN 121

Query: 218 -LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 276
              ++H D+KP N+L+ S   IK+ D+  S                   ++I+  + T+ 
Sbjct: 122 VHRIMHRDIKPSNILVNSRGQIKLCDFGVSG------------------ELINSIADTF- 162

Query: 277 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 323
                  V T  Y +PE I G  +T   D+WS+G  ++EL  G+  F
Sbjct: 163 -------VGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPF 202

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 59.1 bits (143), Expect = 8e-10
 Identities = 62/237 (26%), Positives = 101/237 (42%), Gaps = 51/237 (21%)

Query: 98  RY-KIHSKMGEGTFGQV-LECWDRERK---EMVAIKIVRG--IKKYREAAMIEIEVLQQL 150
           RY K    +GEG FG+V L C+D       EMVA+K ++    ++       EI +L+ L
Sbjct: 4   RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTL 63

Query: 151 AKHD---------KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLV 201
              +         + G + +Q+           + +  LGS L D+L K+      + L 
Sbjct: 64  YHENIVKYKGCCSEQGGKGLQL----------IMEYVPLGS-LRDYLPKHKLNLAQLLL- 111

Query: 202 REIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPK 261
              A+Q+ E +A++H    IH DL   NVLL +   +K+ D+  +   P+   Y+     
Sbjct: 112 --FAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY----- 164

Query: 262 SSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
               +V + G             S   + A E +    ++Y  D+WS G  L EL T
Sbjct: 165 ----RVREDGD------------SPVFWYAVECLKENKFSYASDVWSFGVTLYELLT 205

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 58.8 bits (142), Expect = 9e-10
 Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 35/228 (15%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIV---RGIKKYREA-AMIEIEVLQQLAKHDKGGNRC 160
           +G+G FG+V     +   +M A K +   R  KK  E  A++E E+L+++          
Sbjct: 1   LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSP-----FI 55

Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V +   F+ + H+C+V   + G  L   +     R   ++ V   + Q+   I  +H + 
Sbjct: 56  VNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD 115

Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +++ D+KPENVLL      ++ D   ++                       G T  +R  
Sbjct: 116 IVYRDMKPENVLLDDQGNCRLSDLGLAVELKD-------------------GKTITQR-- 154

Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 327
                 T  Y APE++    ++YP D +++GC + E+  G   F+ H+
Sbjct: 155 ----AGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHK 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 58.4 bits (141), Expect = 1e-09
 Identities = 69/283 (24%), Positives = 123/283 (43%), Gaps = 40/283 (14%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIK---IVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCV 161
           +G+G++G+V     R   +   IK   +    ++ R+AA  E ++L QL KH    N   
Sbjct: 8   VGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQL-KHP---NIVA 63

Query: 162 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
              +W      + IV     G  LY  L++   +  P + V E   Q+   + ++H+  +
Sbjct: 64  YRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHI 123

Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 280
           +H DLK +NV L  +  IKV D               R+ ++      D  ST       
Sbjct: 124 LHRDLKTQNVFLTRTNIIKVGDLG-----------IARVLENQC----DMAST------- 161

Query: 281 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL- 339
             ++ T +Y +PE+     + Y  D+W++GC + E+ T +  F      +  +++ R++ 
Sbjct: 162 --LIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAK---DMNSLVYRIIE 216

Query: 340 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP 382
           G LP  M K       + +       PE    R S+KS+++ P
Sbjct: 217 GKLPP-MPKDYSPELGELIATMLSKRPE---KRPSVKSILRQP 255

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 58.8 bits (142), Expect = 1e-09
 Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 41/228 (17%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           +G+G+FG+VL    + + E  A+K ++     I    E  M+E  VL    ++       
Sbjct: 3   LGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENP----FL 58

Query: 161 VQIRNWFDYRNHICIVFEKL--GSSLYDFLRKNNYRSFPIDLVREI--ARQLLECIAFMH 216
             +   F  + H+  V E L  G  ++    K  +     DL R    A +++  + F+H
Sbjct: 59  THLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRF-----DLYRATFYAAEIVCGLQFLH 113

Query: 217 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 276
              +I+ DLK +NV+L    +IK+ D+               M K +     D  ++T+ 
Sbjct: 114 SKGIIYRDLKLDNVMLDRDGHIKIADFG--------------MCKENVFG--DNRASTF- 156

Query: 277 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
                    T  Y APE++ GL +T+  D WS G +L E+  G++ F 
Sbjct: 157 -------CGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFH 197

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 58.9 bits (142), Expect = 1e-09
 Identities = 63/261 (24%), Positives = 108/261 (41%), Gaps = 54/261 (20%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ-- 162
           +G+GTFG+V+   ++      A+KI++     +E  + + EV   L +     NR +Q  
Sbjct: 3   LGKGTFGKVILVKEKATGRYYAMKILK-----KEVIVAKDEVAHTLTE-----NRVLQNS 52

Query: 163 -------IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                  ++  F   + +C V E   G  L+  L +   R F  D  R    +++  + +
Sbjct: 53  RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDY 110

Query: 215 MH-DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           +H +  +++ DLK EN++L    +IK+ D+       KD +  K                
Sbjct: 111 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF-------------- 156

Query: 274 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEH 331
                       T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  
Sbjct: 157 ----------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE 206

Query: 332 LAMME-----RVLGPLPQHML 347
           L +ME     R L P  + +L
Sbjct: 207 LILMEEIRFPRTLSPEAKSLL 227

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 58.7 bits (142), Expect = 2e-09
 Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 52/242 (21%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           + + S +G G FG+V    ++   ++ A+K+   +KK   + ++  E +    +      
Sbjct: 3   FDVKSLVGRGHFGEVQVVREKATGDIYAMKV---MKK---SVLLAQETVSFFEEE----R 52

Query: 159 RCVQIRN--W-------FDYRNHICIVFEKL-GSSLYDFLRKNNYRS-FPIDLVREIARQ 207
             + I N  W       F  ++++ +V E   G  L   L  N Y   F  D+ +    +
Sbjct: 53  DILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLL--NRYEDQFDEDMAQFYLAE 110

Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           L+  I  +H +  +H D+KPENVL+  + +IK+ D+ S+     +     ++P       
Sbjct: 111 LVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLP------- 163

Query: 268 IDFGSTTYERPDQNYIVSTRHYRAPEVILGL----GWTY--PCDIWSVGCILVELCTGEA 321
                           V T  Y APEV+  +      TY   CD WS+G I  E+  G +
Sbjct: 164 ----------------VGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRS 207

Query: 322 LF 323
            F
Sbjct: 208 PF 209

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 58.0 bits (140), Expect = 2e-09
 Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 46/231 (19%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-EIEVLQQLAKHDKG 156
           +Y    K+G+G  G V    D    + VAIK +   ++ ++  +I EI V+++       
Sbjct: 20  KYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRE------- 72

Query: 157 GNRCVQIRNWFD---YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
            N+   I N+ D     + + +V E L G SL D + +       I  V    R+ L+ +
Sbjct: 73  -NKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQAL 128

Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
            F+H   +IH D+K +N+LL                               ++K+ DFG 
Sbjct: 129 EFLHSNQVIHRDIKSDNILL---------------------------GMDGSVKLTDFGF 161

Query: 273 TTYERPDQN---YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 320
                P+Q+    +V T ++ APEV+    +    DIWS+G + +E+  GE
Sbjct: 162 CAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 58.5 bits (141), Expect = 2e-09
 Identities = 63/248 (25%), Positives = 106/248 (42%), Gaps = 49/248 (19%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQL-AKHD----KGGNR 159
           +G G FG+V     ++   + A+KI+R      +A M+E E +  + A+ D      G  
Sbjct: 9   IGRGAFGEVRLVQKKDTGHIYAMKILR------KADMLEKEQVAHIRAERDILVEADGAW 62

Query: 160 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL-----LECIA 213
            V++   F  + ++ ++ E L G  +   L K        D + E A Q      +  I 
Sbjct: 63  VVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKK-------DTLSEEATQFYIAETVLAID 115

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPD---------------YKSSLHTPKDSSYFKR 258
            +H L  IH D+KP+N+LL +  ++K+ D               Y++  H P     F+ 
Sbjct: 116 AIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQN 175

Query: 259 MPKSSAIKVIDFGSTTYERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE 315
           M            + T+++  +      V T  Y APEV +  G+   CD WS+G I+ E
Sbjct: 176 MNSKRK-------AETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYE 228

Query: 316 LCTGEALF 323
           +  G   F
Sbjct: 229 MLIGYPPF 236

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 57.9 bits (140), Expect = 2e-09
 Identities = 76/339 (22%), Positives = 131/339 (38%), Gaps = 85/339 (25%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 160
           +G+G FG+V  C  R   +M A K +  + IKK +  AM   E ++L+++          
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-----NSRFV 62

Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V +   ++ ++ +C+V   + G  L   +       F  +     A ++   +  +H   
Sbjct: 63  VSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER 122

Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +++ DLKPEN+LL    +I++ D   ++  P+                   G T   R  
Sbjct: 123 IVYRDLKPENILLDDYGHIRISDLGLAVEIPE-------------------GETIRGR-- 161

Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 339
               V T  Y APEV+    +T+  D W +GC++ E+  G++ F+  +       +ER  
Sbjct: 162 ----VGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVER-- 215

Query: 340 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 399
                    RV    E+Y  +    + E A S                            
Sbjct: 216 ---------RVKEDQEEYSEK----FSEAARS---------------------------- 234

Query: 400 THLLQGLLRYDPTDRL-----TAREALRHPFFTRDHLRR 433
             + + LL  DP  RL      A E   HPFF   + +R
Sbjct: 235 --ICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFKR 271

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 57.4 bits (138), Expect = 3e-09
 Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 34/241 (14%)

Query: 100 KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 9   RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 62

Query: 159 RCVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 63  -LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 120

Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
           +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 121 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 168

Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 336
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 169 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 217

Query: 337 R 337
           R
Sbjct: 218 R 218

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 57.4 bits (139), Expect = 3e-09
 Identities = 52/238 (21%), Positives = 95/238 (39%), Gaps = 59/238 (24%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKI--VRGIKKYREAAMI--EIEVLQQL-- 150
              +    +G GTFG+V    DR  +   A+K+  +  + + ++   +  E  VL+++  
Sbjct: 1   DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSH 60

Query: 151 --------AKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLV 201
                    +HD+                 + ++ E + G  L+ +LR  N   F     
Sbjct: 61  PFIIRLFWTEHDQ---------------RFLYMLMEYVPGGELFSYLR--NSGRFSNSTG 103

Query: 202 REIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPK 261
              A +++  + ++H   +++ DLKPEN+LL    +IK+ D+                  
Sbjct: 104 LFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDF------------------ 145

Query: 262 SSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
             A K+ D   T         +  T  Y APEVI   G     D W++G ++ E+  G
Sbjct: 146 GFAKKLRDRTWT---------LCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVG 194

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 57.6 bits (139), Expect = 3e-09
 Identities = 75/332 (22%), Positives = 129/332 (38%), Gaps = 86/332 (25%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 160
           +G+GTFGQV +   ++ + + A+K++  + I   +E A    E  +L +    +      
Sbjct: 1   IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDE--SPFI 58

Query: 161 VQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V ++  F   + + +V +   G  L+  L+K     F  D  +    +L+  +  +H   
Sbjct: 59  VGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEG--RFSEDRAKFYIAELVLALEHLHKYD 116

Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +++ DLKPEN+LL ++ +I + D+  S     D+                   TT     
Sbjct: 117 IVYRDLKPENILLDATGHIALCDFGLSKANLTDN------------------KTT----- 153

Query: 280 QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 338
            N    T  Y APEV+L   G+T   D WS+G ++ E+C G + F               
Sbjct: 154 -NTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPF--------------- 197

Query: 339 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 398
                Q M +         +  G++ +P+   S E                         
Sbjct: 198 YAEDTQQMYRN--------IAFGKVRFPKNVLSDEG------------------------ 225

Query: 399 LTHLLQGLLRYDPTDRL----TAREALRHPFF 426
               ++GLL  +P  RL     A E   HPFF
Sbjct: 226 -RQFVKGLLNRNPQHRLGAHRDAVELKEHPFF 256

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 56.6 bits (136), Expect = 5e-09
 Identities = 60/289 (20%), Positives = 123/289 (42%), Gaps = 43/289 (14%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI- 163
           +G GT+GQV +    +  ++ AIK++       E    EI +L++ + H           
Sbjct: 14  VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 73

Query: 164 -RNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 221
            +N     + + +V E  G+ S+ D ++     +   + +  I R++L  ++ +H   +I
Sbjct: 74  KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVI 133

Query: 222 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERP-- 278
           H D+K +NVLL                            +++ +K++DFG S   +R   
Sbjct: 134 HRDIKGQNVLLT---------------------------ENAEVKLVDFGVSAQLDRTVG 166

Query: 279 DQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 333
            +N  + T ++ APEVI         + +  D+WS+G   +E+  G         +  L 
Sbjct: 167 RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF 226

Query: 334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP 382
           ++ R   P P+   K+  +  + ++    +   +  + R + + +MK P
Sbjct: 227 LIPR--NPAPRLKSKKWSKKFQSFIESCLV---KNHSQRPTTEQLMKHP 270

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 57.0 bits (137), Expect = 5e-09
 Identities = 68/324 (20%), Positives = 124/324 (38%), Gaps = 78/324 (24%)

Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+GEG+ G V    ++     VA+K++   K+ R   +    V+ +  +H       V++
Sbjct: 28  KIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH----QNVVEM 83

Query: 164 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
              +     + ++ E L G +L D + +       I  V E    +L+ + ++H   +IH
Sbjct: 84  YKSYLVGEELWVLMEFLQGGALTDIVSQTRLNEEQIATVCE---SVLQALCYLHSQGVIH 140

Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
            D+K +++LL     +K+ D+       KD                         P +  
Sbjct: 141 RDIKSDSILLTLDGRVKLSDFGFCAQISKDV------------------------PKRKS 176

Query: 283 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 342
           +V T ++ APEVI    +    DIWS+G +++E+  GE  + +                 
Sbjct: 177 LVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDS--------------- 221

Query: 343 PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL 402
           P   +KR+           R   P    +   I  V++                      
Sbjct: 222 PVQAMKRL-----------RDSPPPKLKNAHKISPVLR--------------------DF 250

Query: 403 LQGLLRYDPTDRLTAREALRHPFF 426
           L+ +L  +P +R TA+E L HPF 
Sbjct: 251 LERMLTREPQERATAQELLDHPFL 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 56.6 bits (136), Expect = 8e-09
 Identities = 76/335 (22%), Positives = 121/335 (36%), Gaps = 94/335 (28%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMI-EIEVLQQLAKHDKGGNRC 160
           +G+GTFG+V+   ++      A+KI+R    I K   A  + E  VLQ   +H       
Sbjct: 3   LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHP----FL 57

Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
             ++  F   + +C V E   G  L+  L +   R F  +  R    +++  + ++H   
Sbjct: 58  TALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRD 115

Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +++ D+K EN++L    +IK+ D+        D +  K                      
Sbjct: 116 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF-------------------- 155

Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMMER 337
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 156 ----CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 211

Query: 338 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 397
           +  P                    R   PE  +                           
Sbjct: 212 IRFP--------------------RTLSPEAKS--------------------------- 224

Query: 398 DLTHLLQGLLRYDPTDRL-----TAREALRHPFFT 427
               LL GLL+ DP  RL      A+E + H FF 
Sbjct: 225 ----LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 255

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 56.2 bits (135), Expect = 8e-09
 Identities = 64/259 (24%), Positives = 103/259 (39%), Gaps = 70/259 (27%)

Query: 96  TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK 155
           T  ++I   +G+GT+G+V +  +++   + A+KI+  I    E    E  +LQ L  H  
Sbjct: 21  TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPN 80

Query: 156 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLEC---- 211
                V+    F Y+    +     G  L+  L   N  S     V E+ + LL C    
Sbjct: 81  ----VVKFYGMF-YKADKLV-----GGQLWLVLELCNGGS-----VTELVKGLLICGQRL 125

Query: 212 ----IAF-----------MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF 256
               I++           +H+  +IH D+K  N+LL +                      
Sbjct: 126 DEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTT---------------------- 163

Query: 257 KRMPKSSAIKVIDFGST---TYERPDQNYIVSTRHYRAPEVI-----LGLGWTYPCDIWS 308
                   +K++DFG +   T  R  +N  V T  + APEVI         +   CD+WS
Sbjct: 164 -----EGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWS 218

Query: 309 VGCILVELCTGE-ALFQTH 326
           +G   +EL  G+  LF  H
Sbjct: 219 LGITAIELGDGDPPLFDMH 237

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 56.2 bits (135), Expect = 9e-09
 Identities = 59/245 (24%), Positives = 102/245 (41%), Gaps = 38/245 (15%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRC 160
           +G+G+FG+VL    +   +  A+K+++      +K ++  M E  VL +  KH       
Sbjct: 3   IGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHP----FL 58

Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V +   F     +  V + + G  L+  L++   RSFP    R  A ++   + ++H + 
Sbjct: 59  VGLHYSFQTTEKLYFVLDFVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSIN 116

Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +++ DLKPEN+LL S  ++ + D+                     I   D  +T      
Sbjct: 117 IVYRDLKPENILLDSQGHVVLTDFGLC---------------KEGIAQSDTTTT------ 155

Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF---QTHENLEHLAMME 336
                 T  Y APEVI    +    D W +G +L E+  G   F      E  +++    
Sbjct: 156 ---FCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKP 212

Query: 337 RVLGP 341
            VL P
Sbjct: 213 LVLRP 217

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 55.8 bits (135), Expect = 9e-09
 Identities = 52/236 (22%), Positives = 101/236 (42%), Gaps = 39/236 (16%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMI-EIEVLQQLAKHD 154
           +++   +G+G FG+V     R+ K+M A+K +     ++K     ++ E  +LQ+L  H 
Sbjct: 2   FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL-NH- 59

Query: 155 KGGNRCVQIRNWFDYRNHICIVFE-KLGSSL-YDFLRKNNYRSFPIDLVREIARQLLECI 212
                 V +   F    ++ +V +  LG  L Y   +K     F  + V+    +++  +
Sbjct: 60  ---PFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLAL 113

Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
            ++H   +IH D+KP+N+LL    ++ + D+  +     D+                  +
Sbjct: 114 EYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTL-----------------T 156

Query: 273 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 328
           T+           T  Y APEV+   G++   D WS+G    E   G+  ++ H  
Sbjct: 157 TST--------SGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSR 204

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 56.5 bits (136), Expect = 1e-08
 Identities = 52/226 (23%), Positives = 90/226 (39%), Gaps = 52/226 (23%)

Query: 108 GTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF 167
           G  G    C D +  E V IK  +     R     E  +L+ +  H       +Q++  F
Sbjct: 103 GAEGFAFACIDNKTCEHVVIKAGQ-----RGGTATEAHILRAI-NHPS----IIQLKGTF 152

Query: 168 DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKP 227
            Y    C++  +  + LY +L     R+  I  +  I R +L  I ++H+  +IH D+K 
Sbjct: 153 TYNKFTCLILPRYKTDLYCYL--AAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKA 210

Query: 228 ENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTR 287
           EN+ +               + P D            + + DFG+  +       I + +
Sbjct: 211 ENIFI---------------NHPGD------------VCLGDFGAACFPVD----INANK 239

Query: 288 HY--------RAPEVILGLGWTYPCDIWSVGCILVELCTGE-ALFQ 324
           +Y         APE++    +    DIWS G +L E+ T   +LF+
Sbjct: 240 YYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFE 285

Length = 391

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 55.4 bits (133), Expect = 1e-08
 Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 36/234 (15%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAK 152
           + ++I  K+G G F +V           VA+K V+       K R   + EI++L+QL  
Sbjct: 2   ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 61

Query: 153 HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLR--KNNYRSFPIDLVREIARQLL 209
            +      ++    F   N + IV E      L   ++  K   R  P   V +   QL 
Sbjct: 62  PN-----VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLC 116

Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
             +  MH   ++H D+KP NV + ++  +K+ D            +F    K++A     
Sbjct: 117 SALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGL-------GRFFSS--KTTA----- 162

Query: 270 FGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 323
                      + +V T +Y +PE I   G+ +  DIWS+GC+L E+   ++ F
Sbjct: 163 ----------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 206

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 55.4 bits (133), Expect = 1e-08
 Identities = 60/240 (25%), Positives = 101/240 (42%), Gaps = 51/240 (21%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++I   +G+GT+G+V +  +++     A+KI+  I    E    E  +L+ L+ H     
Sbjct: 20  WEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPN--- 76

Query: 159 RCVQIRNWF---DYRN--HICIVFEKL-GSSLYD----FLRKNNYRSFPIDLVREIARQL 208
             V+    +   D +N   + +V E   G S+ D    FL++      PI  +  I  + 
Sbjct: 77  -VVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPI--IAYILHEA 133

Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
           L  +  +H    IH D+K  N+LL +                              +K++
Sbjct: 134 LMGLQHLHVNKTIHRDVKGNNILLTT---------------------------EGGVKLV 166

Query: 269 DFGST---TYERPDQNYIVSTRHYRAPEVI-----LGLGWTYPCDIWSVGCILVELCTGE 320
           DFG +   T  R  +N  V T  + APEVI     L   +   CD+WS+G   +EL  G+
Sbjct: 167 DFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGD 226

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 55.0 bits (132), Expect = 2e-08
 Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 37/229 (16%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 160
           +G+G FG+V  C  R   +M A K +  + IKK +  AM   E  +L+++          
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKV-----NSRFV 62

Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI--ARQLLECIAFMHDL 218
           V +   ++ ++ +C+V   +      F    N  +   D  R I  A +L   +  +   
Sbjct: 63  VSLAYAYETKDALCLVLTIMNGGDLKF-HIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE 121

Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
            +++ DLKPEN+LL    +I++ D   ++  P+                   G T   R 
Sbjct: 122 RIVYRDLKPENILLDDRGHIRISDLGLAVQIPE-------------------GETVRGR- 161

Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 327
                V T  Y APEVI    +T+  D W +GC++ E+  G++ F+  +
Sbjct: 162 -----VGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRK 205

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 55.4 bits (133), Expect = 2e-08
 Identities = 54/220 (24%), Positives = 94/220 (42%), Gaps = 41/220 (18%)

Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIV----RGIKKYREAAMIEIEVLQQLAKHDKGGNR 159
           ++G G+FG V    +    E+VA+K +    +   +  +  + E++ LQQL KH      
Sbjct: 28  EIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQL-KHPN---- 82

Query: 160 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
            ++ +  +   +   +V E    S  D L  +      +++   I    L+ +A++H   
Sbjct: 83  TIEYKGCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-AITHGALQGLAYLHSHN 141

Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           MIH D+K  N+LL                            +   +K+ DFGS +   P 
Sbjct: 142 MIHRDIKAGNILLT---------------------------EPGQVKLADFGSASKSSP- 173

Query: 280 QNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVEL 316
            N  V T ++ APEVIL +    +    D+WS+G   +EL
Sbjct: 174 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 213

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 54.0 bits (130), Expect = 4e-08
 Identities = 57/248 (22%), Positives = 97/248 (39%), Gaps = 57/248 (22%)

Query: 105 MGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIE------IEVLQQLAKHDKGG 157
           +G G FG V L  W  +    VAIK++R      E AM E       +V+ +L+ H    
Sbjct: 12  LGSGQFGVVHLGKWRGKID--VAIKMIR------EGAMSEDDFIEEAKVMMKLS-HPN-- 60

Query: 158 NRCVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 216
              VQ+      +  I IV E + +  L ++LR+   +    + + ++   + E + ++ 
Sbjct: 61  --LVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGK-LGTEWLLDMCSDVCEAMEYLE 117

Query: 217 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 276
               IH DL   N  LV  + +                          +KV DFG   Y 
Sbjct: 118 SNGFIHRDLAARNC-LVGEDNV--------------------------VKVSDFGLARYV 150

Query: 277 RPDQNYIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 331
             DQ Y  S        +  PEV     ++   D+WS G ++ E+ +   +   +E   +
Sbjct: 151 LDDQ-YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKM--PYERFSN 207

Query: 332 LAMMERVL 339
             ++E V 
Sbjct: 208 SEVVESVS 215

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 54.3 bits (130), Expect = 4e-08
 Identities = 65/319 (20%), Positives = 129/319 (40%), Gaps = 77/319 (24%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G++ +VL    ++  ++ A+K+V+    + +  +  ++  + + +        V + 
Sbjct: 3   IGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLH 62

Query: 165 NWFDYRNHICIVFEKL--GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
           + F   + + +V E +  G  ++   R+   R  P +  R  A ++   + F+H+  +I+
Sbjct: 63  SCFQTTSRLFLVIEYVNGGDLMFHMQRQ---RKLPEEHARFYAAEICIALNFLHERGIIY 119

Query: 223 TDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
            DLK +NVLL +  +IK+ DY   K  L     +S F   P                   
Sbjct: 120 RDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTP------------------- 160

Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 339
            NYI       APE++ G  + +  D W++G ++ E+  G + F                
Sbjct: 161 -NYI-------APEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI-------------- 198

Query: 340 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 399
                 +    D + E Y+ +  L+ P            +++PR  ++   HV       
Sbjct: 199 ------ITDNPDMNTEDYLFQVILEKP------------IRIPRFLSVKASHV------- 233

Query: 400 THLLQGLLRYDPTDRLTAR 418
              L+G L  DP +RL  +
Sbjct: 234 ---LKGFLNKDPKERLGCQ 249

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 54.5 bits (131), Expect = 4e-08
 Identities = 74/348 (21%), Positives = 141/348 (40%), Gaps = 77/348 (22%)

Query: 98  RYKIHSKMGEGTFGQVLEC--WDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK 155
           +Y I S +  G+ G+V  C     E+++ V +K V G K        EI++L+ +     
Sbjct: 93  QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGKTPGR----EIDILKTI----- 143

Query: 156 GGNRCVQIR--NWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
             +    I   + + +++ +C+V  K    L+ ++ ++     P++    I R+LLE +A
Sbjct: 144 --SHRAIINLIHAYRWKSTVCMVMPKYKCDLFTYVDRSG--PLPLEQAITIQRRLLEALA 199

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS------SLHTPKDSSYFKRMPKSSAIKV 267
           ++H   +IH D+K EN+ L   E   + D+ +         TP+   +            
Sbjct: 200 YLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGW------------ 247

Query: 268 IDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE-ALF--Q 324
                             T    +PE++    +    DIWS G +L E+      LF  Q
Sbjct: 248 ----------------SGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQ 291

Query: 325 THENLEHLAMMERVLG--PL--PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK 380
              +   L  + R +   PL  PQ+    + +H ++Y    R  +           ++  
Sbjct: 292 VKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPY-----------TIPP 340

Query: 381 LPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           + R   + M        D+ +L+  +L +D   R +A++ L  P FT+
Sbjct: 341 VIRKYGMHM--------DVEYLIAKMLTFDQEFRPSAQDILSLPLFTK 380

Length = 392

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 54.2 bits (130), Expect = 4e-08
 Identities = 55/232 (23%), Positives = 100/232 (43%), Gaps = 37/232 (15%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           +G+G+FG+V     +   +  AIK ++     +    E  M+E  VL    +H       
Sbjct: 3   LGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP----FL 58

Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI--ARQLLECIAFMHDL 218
             +   F  + ++  V E L      F  ++ ++    DL R    A +++  + F+H  
Sbjct: 59  THLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHK---FDLPRATFYAAEIICGLQFLHSK 115

Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
            +++ DLK +N+LL +  +IK+ D+               M K + +   D  + T+   
Sbjct: 116 GIVYRDLKLDNILLDTDGHIKIADFG--------------MCKENMLG--DAKTCTF--- 156

Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                  T  Y APE++LG  +    D WS G +L E+  G++ F  H+  E
Sbjct: 157 -----CGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE 203

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 53.5 bits (128), Expect = 4e-08
 Identities = 64/241 (26%), Positives = 111/241 (46%), Gaps = 34/241 (14%)

Query: 100 KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           K+  K+G G FG+V +  +++  K  VA+K ++      EA + E  V++ L +HDK   
Sbjct: 9   KLEKKLGAGQFGEVWMATYNKHTK--VAVKTMKPGSMSVEAFLAEANVMKTL-QHDK--- 62

Query: 159 RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             V++ +    +  I I+ E +   SL DFL+ +     P+  + + + Q+ E +AF+  
Sbjct: 63  -LVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 120

Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
              IH DL+  N+L+ +S   K+ D+  +    +D+ Y  R      IK           
Sbjct: 121 RNYIHRDLRAANILVSASLVCKIADFGLA-RVIEDNEYTAREGAKFPIK----------- 168

Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 336
                      + APE I    +T   D+WS G +L+E+ T G   +    N E +  +E
Sbjct: 169 -----------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE 217

Query: 337 R 337
           R
Sbjct: 218 R 218

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 54.3 bits (130), Expect = 5e-08
 Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 35/241 (14%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQL-AKHD----KGGNR 159
           +G G FG+V     ++   + A+KI+R      +A M+E E +  + A+ D         
Sbjct: 9   IGRGAFGEVRLVQKKDTGHVYAMKILR------KADMLEKEQVGHIRAERDILVEADSLW 62

Query: 160 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL-----LECIA 213
            V++   F  + ++ ++ E L G  +   L K        D + E   Q      +  I 
Sbjct: 63  VVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKK-------DTLTEEETQFYIAETVLAID 115

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYK--SSLHTPKDSSYFKRMPKS--SAIKVID 269
            +H L  IH D+KP+N+LL S  ++K+ D+   + L     + +++ +  S  S     +
Sbjct: 116 SIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQN 175

Query: 270 FGST----TYERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL 322
             S     T++R  +      V T  Y APEV +  G+   CD WS+G I+ E+  G   
Sbjct: 176 MNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235

Query: 323 F 323
           F
Sbjct: 236 F 236

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 53.6 bits (129), Expect = 5e-08
 Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 34/153 (22%)

Query: 171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPE 228
             I I  E + G SL   L+K      P +++ +I+  +L  + ++ +   ++H D+KP 
Sbjct: 72  GEISICMEHMDGGSLDQVLKK--AGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPS 129

Query: 229 NVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVST 286
           N+L+ S   IK+ D+  S  L    DS                           N  V T
Sbjct: 130 NILVNSRGEIKLCDFGVSGQLI---DSM-------------------------ANSFVGT 161

Query: 287 RHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
           R Y +PE + G  +T   DIWS+G  LVE+  G
Sbjct: 162 RSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIG 194

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 53.3 bits (128), Expect = 6e-08
 Identities = 64/241 (26%), Positives = 108/241 (44%), Gaps = 34/241 (14%)

Query: 100 KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           K+  K+G G FG+V +  ++   K  VAIK ++      EA + E  +++QL +H     
Sbjct: 9   KLVKKLGAGQFGEVWMGYYNGHTK--VAIKSLKQGSMSPEAFLAEANLMKQL-QH----P 61

Query: 159 RCVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
           R V++      +  I I+ E + + SL DFL+        I+ + ++A Q+ E +AF+  
Sbjct: 62  RLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIER 120

Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
              IH DL+  N+L+  +   K+ D+  +    +D+ Y  R      IK           
Sbjct: 121 KNYIHRDLRAANILVSETLCCKIADFGLA-RLIEDNEYTAREGAKFPIK----------- 168

Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 336
                      + APE I    +T   D+WS G +L E+ T G   +    N E +  +E
Sbjct: 169 -----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLE 217

Query: 337 R 337
           R
Sbjct: 218 R 218

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 53.3 bits (128), Expect = 6e-08
 Identities = 56/268 (20%), Positives = 115/268 (42%), Gaps = 52/268 (19%)

Query: 99  YKIHSKMGEGTFGQVLECWDRER-KEMVAIKIV-------RGIKKYREAA---MI-EIEV 146
           Y +   +G G FG V +   +   + ++A+K +          K+ R+ +   ++ E+ +
Sbjct: 2   YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTI 61

Query: 147 LQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLR--KNNYRSFPIDLVRE 203
           +++  +H       V+    F   + + IV + + G+ L +     K   + F  + +  
Sbjct: 62  IKEQLRHPN----IVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWN 117

Query: 204 IARQLLECIAFMH-DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 262
           I  Q++  + ++H +  ++H DL P N++L   +                          
Sbjct: 118 IFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDD-------------------------- 151

Query: 263 SAIKVIDFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 320
             + + DFG    ++P+     +V T  Y  PE++    +    D+W+ GCIL ++CT +
Sbjct: 152 -KVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQ 210

Query: 321 ALFQTHENLEHLAM--MERVLGPLPQHM 346
             F +  N+  LA   +E V  PLP+ M
Sbjct: 211 PPFYS-TNMLSLATKIVEAVYEPLPEGM 237

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 53.3 bits (129), Expect = 6e-08
 Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 47/186 (25%)

Query: 184 LYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY 243
           L+D L+K          V++I RQL+E +  +H   +IH D+K ENVL            
Sbjct: 96  LFDLLKKE--GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVL------------ 141

Query: 244 KSSLHTPKDSSYFKRMPKSSAIKVIDFG-------STTYERPDQNYIVSTRHYRAPEVIL 296
                      Y +   +   I + D+G        + Y+         T  Y +PE I 
Sbjct: 142 -----------YDRAKDR---IYLCDYGLCKIIGTPSCYDG--------TLDYFSPEKIK 179

Query: 297 GLGWTYPCDIWSVGCILVELCTGEALFQTH--ENLEHLAMMERVLGPLPQHMLKRVDRHA 354
           G  +    D W+VG +  EL TG+  F+    E L+  ++++R    LP   +K V ++A
Sbjct: 180 GHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLP--FIKNVSKNA 237

Query: 355 EKYVRR 360
             +V+ 
Sbjct: 238 NDFVQS 243

Length = 267

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 53.6 bits (128), Expect = 7e-08
 Identities = 59/222 (26%), Positives = 90/222 (40%), Gaps = 45/222 (20%)

Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           ++G G+FG V    D    E+VAIK      K   +     E  Q + K  K   R ++ 
Sbjct: 32  EIGHGSFGAVYFARDVRTNEVVAIK------KMSYSGKQSNEKWQDIIKEVKFLQR-IKH 84

Query: 164 RNWFDY-----RNHIC-IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
            N  +Y     R H   +V E    S  D L  +      +++   I    L+ +A++H 
Sbjct: 85  PNSIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-AITHGALQGLAYLHS 143

Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
             MIH D+K  N+LL                            +   +K+ DFGS +   
Sbjct: 144 HNMIHRDIKAGNILLT---------------------------EPGQVKLADFGSASIAS 176

Query: 278 PDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVEL 316
           P  N  V T ++ APEVIL +    +    D+WS+G   +EL
Sbjct: 177 P-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 217

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 52.8 bits (127), Expect = 9e-08
 Identities = 58/262 (22%), Positives = 102/262 (38%), Gaps = 65/262 (24%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD--KGGNRCVQ 162
           +G G FG V +   +    ++A+K +R         + E E  + L   D     + C  
Sbjct: 12  IGRGAFGTVNKMLHKPSGTIMAVKRIRST-------VDEKEQKRLLMDLDVVMRSSDCPY 64

Query: 163 IRNWFDYRNH-----IC-----IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
           I  ++          IC     I  +K    +Y+ L+       P +++ +IA   ++ +
Sbjct: 65  IVKFYGALFREGDCWICMELMDISLDKFYKYVYEVLKSV----IPEEILGKIAVATVKAL 120

Query: 213 AFM-HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
            ++  +L +IH D+KP N+LL                            ++  IK+ DFG
Sbjct: 121 NYLKEELKIIHRDVKPSNILL---------------------------DRNGNIKLCDFG 153

Query: 272 STTYERPDQNYIVSTRH-----YRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALF 323
            +       + I  TR      Y APE I      G+    D+WS+G  L E+ TG+  +
Sbjct: 154 ISGQL---VDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPY 210

Query: 324 QTHENL-EHLAMMERVLGPLPQ 344
               ++ + L  +  V G  P 
Sbjct: 211 PKWNSVFDQLTQV--VKGDPPI 230

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 53.1 bits (127), Expect = 1e-07
 Identities = 57/234 (24%), Positives = 100/234 (42%), Gaps = 41/234 (17%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAA--MIEIEVLQQLAKHDKGGNRC 160
           +G+G+FG+VL    +  ++  A+K++  + I K +E    M E  VL +  KH       
Sbjct: 3   IGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP----FL 58

Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V +   F   + +  V + + G  L+  L++   R F     R  A ++   + ++H L 
Sbjct: 59  VGLHFSFQTADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLN 116

Query: 220 MIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 276
           +++ DLKPEN+LL S  +I + D+   K ++     +S F   P+               
Sbjct: 117 IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPE--------------- 161

Query: 277 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                       Y APEV+    +    D W +G +L E+  G   F +    E
Sbjct: 162 ------------YLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE 203

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 53.1 bits (127), Expect = 1e-07
 Identities = 61/241 (25%), Positives = 103/241 (42%), Gaps = 37/241 (15%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++I   +G G FG+V     +  + + A+KI   + K+      E    ++       G+
Sbjct: 3   FEIIKVIGRGAFGEVAVVKMKHTERIYAMKI---LNKWEMLKRAETACFREERNVLVNGD 59

Query: 159 RCVQIRNW---FDYRNHICIVFEK-LGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            C  I      F   N++ +V +  +G  L   L K   R  P D+ R    +++  I  
Sbjct: 60  -CQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDR-LPEDMARFYIAEMVLAIHS 117

Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L  +H D+KP+NVLL  + +I++ D+ S L   +D +      +SS           
Sbjct: 118 IHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTV-----QSSV---------- 162

Query: 275 YERPDQNYIVSTRHYRAPEVIL----GLGWTYP-CDIWSVGCILVELCTGEALFQTHENL 329
                    V T  Y +PE++     G+G   P CD WS+G  + E+  GE  F     +
Sbjct: 163 --------AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV 214

Query: 330 E 330
           E
Sbjct: 215 E 215

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 52.9 bits (127), Expect = 1e-07
 Identities = 57/242 (23%), Positives = 99/242 (40%), Gaps = 41/242 (16%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           +G+G+FG+V+    +   E  AIK ++          E  M+E  VL    +H       
Sbjct: 3   LGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHP----FL 58

Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
             +   F  + H+  V E L      F  +++ R F     R  A +++  + F+H   +
Sbjct: 59  THLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGR-FDEARARFYAAEIICGLQFLHKKGI 117

Query: 221 IHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
           I+ DLK +NVLL    +IK+ D+   K +++    +S F                     
Sbjct: 118 IYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTF--------------------- 156

Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMM 335
                   T  Y APE++ G  +    D WS G +L E+  G++ F  +  + L    + 
Sbjct: 157 ------CGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILN 210

Query: 336 ER 337
           +R
Sbjct: 211 DR 212

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 52.8 bits (126), Expect = 1e-07
 Identities = 58/243 (23%), Positives = 104/243 (42%), Gaps = 41/243 (16%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI----EIEVLQQLAKHD 154
           ++I   +G G FG+V     +   ++ A+KI+   +  + A       E +VL       
Sbjct: 3   FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN----- 57

Query: 155 KGGNRCVQIRNW-FDYRNHICIVFEK-LGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
            G N+ +   ++ F   N++ +V +  +G  L   L K   R  P D+ R    +++  I
Sbjct: 58  -GDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDR-LPEDMARFYLAEMVIAI 115

Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
             +H L  +H D+KP+N+L+  + +I++ D+ S L   +D +                  
Sbjct: 116 DSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV----------------- 158

Query: 273 TTYERPDQNYIVSTRHYRAPEVIL----GLGWTYP-CDIWSVGCILVELCTGEALFQTHE 327
                   +  V T  Y +PE++     G G   P CD WS+G  + E+  GE  F    
Sbjct: 159 ------QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES 212

Query: 328 NLE 330
            +E
Sbjct: 213 LVE 215

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 51.9 bits (125), Expect = 2e-07
 Identities = 62/243 (25%), Positives = 105/243 (43%), Gaps = 45/243 (18%)

Query: 104 KMGEGTFGQVLE-CWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 162
           K+G G FG+V    W+   K  VA+K ++      EA + E +++++L +HDK     VQ
Sbjct: 13  KLGAGQFGEVWMGTWNGTTK--VAVKTLKPGTMSPEAFLQEAQIMKKL-RHDK----LVQ 65

Query: 163 IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 221
           +         I IV E +   SL DFL+    +   +  + ++A Q+ E +A++     I
Sbjct: 66  LYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYI 125

Query: 222 HTDLKPENVLLVSSEYIKVPDY------KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H DL   N+L+  +   K+ D+      +   +T ++ +   + P    IK         
Sbjct: 126 HRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGA---KFP----IK--------- 169

Query: 276 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAM 334
                        + APE      +T   D+WS G +L E+ T G   +    N E L  
Sbjct: 170 -------------WTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQ 216

Query: 335 MER 337
           +ER
Sbjct: 217 VER 219

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 51.8 bits (124), Expect = 2e-07
 Identities = 50/218 (22%), Positives = 94/218 (43%), Gaps = 40/218 (18%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 162
           +G G  G V + +    + ++A+K++      + ++  M E+E+L +           + 
Sbjct: 9   LGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDS-----PYIIG 63

Query: 163 IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 221
               F   N I I  E + G SL      + YR  P  ++  IA  +++ + ++  L ++
Sbjct: 64  FYGAFFVENRISICTEFMDGGSL------DVYRKIPEHVLGRIAVAVVKGLTYLWSLKIL 117

Query: 222 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 281
           H D+KP N+L+ +   +K+ D+  S                   ++++  + TY      
Sbjct: 118 HRDVKPSNMLVNTRGQVKLCDFGVS------------------TQLVNSIAKTY------ 153

Query: 282 YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
             V T  Y APE I G  +    D+WS+G   +EL  G
Sbjct: 154 --VGTNAYMAPERISGEQYGIHSDVWSLGISFMELALG 189

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 51.3 bits (123), Expect = 2e-07
 Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 35/242 (14%)

Query: 100 KIHSKMGEGTFGQVLE-CWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++  K+G G FG+V E  W+      VA+K ++      +  + E +++++L +H K   
Sbjct: 9   QLLRKLGAGQFGEVWEGLWNNTTP--VAVKTLKPGTMDPKDFLAEAQIMKKL-RHPK--- 62

Query: 159 RCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 216
             +Q+         I IV E  K GS L ++L+    R+  +  + ++A Q+   +A++ 
Sbjct: 63  -LIQLYAVCTLEEPIYIVTELMKYGS-LLEYLQGGAGRALKLPQLIDMAAQVASGMAYLE 120

Query: 217 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 276
               IH DL   NVL+  +   KV D+  +    K+  Y  R      IK          
Sbjct: 121 AQNYIHRDLAARNVLVGENNICKVADFGLA-RVIKEDIYEAREGAKFPIK---------- 169

Query: 277 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMM 335
                       + APE  L   ++   D+WS G +L E+ T G   +    N E L  +
Sbjct: 170 ------------WTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQV 217

Query: 336 ER 337
           ++
Sbjct: 218 DQ 219

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 52.0 bits (124), Expect = 3e-07
 Identities = 53/228 (23%), Positives = 100/228 (43%), Gaps = 43/228 (18%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYREAAMIEIE--VLQQLAKHD--KGGN 158
           +G G++ +VL    ++ + + A+K+V+   +    +   ++ E  V +Q + H    G +
Sbjct: 3   IGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 62

Query: 159 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 218
            C Q  +    R    I +   G  ++   R+   R  P +  R  + ++   + ++H+ 
Sbjct: 63  SCFQTES----RLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER 115

Query: 219 CMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
            +I+ DLK +NVLL S  +IK+ DY   K  L     +S F   P               
Sbjct: 116 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP--------------- 160

Query: 276 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 323
                NYI       APE++ G  + +  D W++G ++ E+  G + F
Sbjct: 161 -----NYI-------APEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 51.3 bits (123), Expect = 3e-07
 Identities = 56/228 (24%), Positives = 92/228 (40%), Gaps = 50/228 (21%)

Query: 105 MGEGTFGQVLEC----WDRERKEM-VAIKIVRGIKKY--REAAMIEIEVLQQLAKHDKGG 157
           +G G FG+V+E       +    M VA+K+++       REA M E++++  L  H+   
Sbjct: 43  LGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHE--- 99

Query: 158 NRCVQIRNWFDYRNH---ICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                I N          I ++ E      L +FLR+       ++ +   + Q+ + +A
Sbjct: 100 ----NIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMA 155

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           F+     IH DL   NVLL   +                            +K+ DFG  
Sbjct: 156 FLASKNCIHRDLAARNVLLTHGK---------------------------IVKICDFGLA 188

Query: 274 TYERPDQNYIV--STR---HYRAPEVILGLGWTYPCDIWSVGCILVEL 316
                D NY+V  + R    + APE I    +T+  D+WS G +L E+
Sbjct: 189 RDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEI 236

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 51.2 bits (122), Expect = 4e-07
 Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 41/220 (18%)

Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIV----RGIKKYREAAMIEIEVLQQLAKHDKGGNR 159
           ++G G+FG V    D    E+VAIK +    +   +  +  + E+  LQ+L +H      
Sbjct: 22  EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPN---- 76

Query: 160 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
            +Q R  +   +   +V E    S  D L  +      +++   +    L+ +A++H   
Sbjct: 77  TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-AVTHGALQGLAYLHSHN 135

Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           MIH D+K  N+LL                            +   +K+ DFGS +   P 
Sbjct: 136 MIHRDVKAGNILLS---------------------------EPGLVKLGDFGSASIMAP- 167

Query: 280 QNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVEL 316
            N  V T ++ APEVIL +    +    D+WS+G   +EL
Sbjct: 168 ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 51.2 bits (122), Expect = 5e-07
 Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 38/233 (16%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDK 155
           Y++   +G G FG+V     +  +++ A+K++     IK+   A   E   +   A    
Sbjct: 45  YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN--- 101

Query: 156 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                VQ+   F    ++ +V E + G  L + +  +NY   P    R    +++  +  
Sbjct: 102 -SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNY-DVPEKWARFYTAEVVLALDA 157

Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H +  IH D+KP+N+LL  S ++K+ D+ + +          +M K   ++        
Sbjct: 158 IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM----------KMNKEGMVRC------- 200

Query: 275 YERPDQNYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEALF 323
                 +  V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 201 ------DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 247

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 50.2 bits (120), Expect = 5e-07
 Identities = 62/242 (25%), Positives = 101/242 (41%), Gaps = 44/242 (18%)

Query: 104 KMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 162
           ++G G FG V L  W  + K  VAIK +       E  + E +V+ +L+ H K     VQ
Sbjct: 11  ELGSGQFGVVHLGKWRAQIK--VAIKAINEGAMSEEDFIEEAKVMMKLS-HPK----LVQ 63

Query: 163 IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 221
           +      +  + IV E +    L ++LR+        D++  + + + E + ++     I
Sbjct: 64  LYGVCTQQKPLYIVTEFMENGCLLNYLRQR-QGKLSKDMLLSMCQDVCEGMEYLERNSFI 122

Query: 222 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 281
           H DL   N  LVSS  +                          +KV DFG T Y   D+ 
Sbjct: 123 HRDLAARNC-LVSSTGV--------------------------VKVSDFGMTRYVLDDE- 154

Query: 282 YIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMM 335
           Y  S+       +  PEV     ++   D+WS G ++ E+ T G+  F+   N E + M+
Sbjct: 155 YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMI 214

Query: 336 ER 337
            R
Sbjct: 215 SR 216

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 50.4 bits (120), Expect = 5e-07
 Identities = 53/240 (22%), Positives = 107/240 (44%), Gaps = 39/240 (16%)

Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKH 153
           N    +++  ++G GT+G V +  +    E+ AIK+++ ++   + A+++ E++  + K 
Sbjct: 6   NPQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIK-LEPGEDFAVVQQEII--MMKD 62

Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPID--LVREIARQLLE 210
            K  N      ++   R+ + I  E  G  SL D      + + P+    +  ++R+ L+
Sbjct: 63  CKHSNIVAYFGSYLR-RDKLWICMEFCGGGSLQDIY----HVTGPLSESQIAYVSRETLQ 117

Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++H    +H D+K  N+LL  + ++K+ D+  S                        
Sbjct: 118 GLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQ---------------------I 156

Query: 271 GSTTYERPDQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGE-ALFQTH 326
            +T  +R      + T ++ APEV       G+   CDIW+VG   +EL   +  +F  H
Sbjct: 157 TATIAKRKS---FIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLH 213

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 49.8 bits (119), Expect = 6e-07
 Identities = 64/304 (21%), Positives = 110/304 (36%), Gaps = 94/304 (30%)

Query: 129 IVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDF 187
           I++G++K  E +   + ++     +       V +  +    + + +V +   G  L+  
Sbjct: 22  ILKGLRKSSEYSRERLTIIPHCVPN------MVCLHKYIVSEDSVFLVLQHAEGGKLWSH 75

Query: 188 LRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL 247
           + K  + + P + V+  A +++  +  +H   ++  DL P N+LL    +I++       
Sbjct: 76  ISK--FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQL------- 126

Query: 248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIW 307
                 +YF R             S   +  D   +     Y APEV      T  CD W
Sbjct: 127 ------TYFSRW------------SEVEDSCDGEAV--ENMYCAPEVGGISEETEACDWW 166

Query: 308 SVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE 367
           S+G IL EL TG+ L + H                                       P 
Sbjct: 167 SLGAILFELLTGKTLVECH---------------------------------------PS 187

Query: 368 GAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA-----LR 422
           G  +  ++            I + V   A     LLQ LL+++PT+RL A  A       
Sbjct: 188 GINTHTTLN-----------IPEWVSEEARS---LLQQLLQFNPTERLGAGVAGVEDIKS 233

Query: 423 HPFF 426
           HPFF
Sbjct: 234 HPFF 237

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 50.7 bits (121), Expect = 6e-07
 Identities = 59/241 (24%), Positives = 100/241 (41%), Gaps = 47/241 (19%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRC 160
           +G+G+FG+VL    +      A+K+++      KK +   M E  VL +  KH       
Sbjct: 3   IGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHP----FL 58

Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V +   F     +  V + + G  L+  L++   R F     R  A ++   I ++H L 
Sbjct: 59  VGLHYSFQTAEKLYFVLDYVNGGELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSLN 116

Query: 220 MIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 276
           +I+ DLKPEN+LL S  ++ + D+   K  +   + +S F   P+               
Sbjct: 117 IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPE--------------- 161

Query: 277 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF------QTHENLE 330
                       Y APEV+    +    D W +G +L E+  G   F      Q ++N+ 
Sbjct: 162 ------------YLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNIL 209

Query: 331 H 331
           H
Sbjct: 210 H 210

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 50.0 bits (119), Expect = 7e-07
 Identities = 59/241 (24%), Positives = 107/241 (44%), Gaps = 33/241 (13%)

Query: 100 KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           K+  K+G G FG+V +  ++   K  VA+K ++      +A + E  +++ L +HDK   
Sbjct: 9   KLVKKLGAGQFGEVWMGYYNNSTK--VAVKTLKPGTMSVQAFLEEANLMKTL-QHDK--- 62

Query: 159 RCVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             V++         I I+ E +   SL DFL+ +      +  + + + Q+ E +A++  
Sbjct: 63  -LVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 121

Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
              IH DL+  NVL+  S   K+ D+  +    +D+ Y  R      IK           
Sbjct: 122 KNYIHRDLRAANVLVSESLMCKIADFGLA-RVIEDNEYTAREGAKFPIK----------- 169

Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 336
                      + APE I    +T   D+WS G +L E+ T G+  +    N + ++ ++
Sbjct: 170 -----------WTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQ 218

Query: 337 R 337
           R
Sbjct: 219 R 219

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 50.6 bits (121), Expect = 7e-07
 Identities = 73/334 (21%), Positives = 135/334 (40%), Gaps = 83/334 (24%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYREAAMIEIE--VLQQLAKHD--KGGN 158
           +G G++ +VL    ++ + + A+K+++   +    +   ++ E  V +  + H    G +
Sbjct: 3   IGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLH 62

Query: 159 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 218
            C Q  +    R    I F   G  ++   R+   R  P +  R  + ++   + F+H+ 
Sbjct: 63  SCFQTES----RLFFVIEFVSGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNFLHER 115

Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
            +I+ DLK +NVLL +  +IK+ DY               M K   I+  D  ST    P
Sbjct: 116 GIIYRDLKLDNVLLDAEGHIKLTDYG--------------MCK-EGIRPGDTTSTFCGTP 160

Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 338
             NYI       APE++ G  + +  D W++G ++ E+  G + F      ++       
Sbjct: 161 --NYI-------APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDN------- 204

Query: 339 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 398
                       D++ E Y+ +  L+              +++PR  ++    V      
Sbjct: 205 -----------PDQNTEDYLFQVILEKQ------------IRIPRSLSVKASSV------ 235

Query: 399 LTHLLQGLLRYDPTDRLTA------REALRHPFF 426
               L+G L  DP +RL        R+   HPFF
Sbjct: 236 ----LKGFLNKDPKERLGCHPQTGFRDIKSHPFF 265

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 50.2 bits (120), Expect = 1e-06
 Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 27/121 (22%)

Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           +++  +  +H +  IH D+KP+N+LL  S ++K+ D+ + +          +M  +  ++
Sbjct: 150 EVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM----------KMDANGMVR 199

Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEAL 322
                 T    PD         Y +PEV+   G    +   CD WSVG  L E+  G+  
Sbjct: 200 C----DTAVGTPD---------YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 246

Query: 323 F 323
           F
Sbjct: 247 F 247

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 50.0 bits (119), Expect = 1e-06
 Identities = 52/233 (22%), Positives = 100/233 (42%), Gaps = 38/233 (16%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDK 155
           Y +   +G G FG+V     +  +++ A+K++     IK+   A   E   +   A    
Sbjct: 45  YDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN--- 101

Query: 156 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                VQ+   F    ++ +V E + G  L + +  +NY   P    +    +++  +  
Sbjct: 102 -SPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM--SNY-DVPEKWAKFYTAEVVLALDA 157

Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H + +IH D+KP+N+LL    ++K+ D+ + +          +M ++  ++        
Sbjct: 158 IHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCM----------KMDETGMVRC------- 200

Query: 275 YERPDQNYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEALF 323
                 +  V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 201 ------DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 247

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional

 Score = 49.8 bits (119), Expect = 2e-06
 Identities = 56/259 (21%), Positives = 95/259 (36%), Gaps = 83/259 (32%)

Query: 200 LVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM 259
           +++ I RQ+L  +  +H   ++H D+KP+N++                            
Sbjct: 256 IIQTIMRQILFALDGLHSTGIVHRDVKPQNIIF--------------------------S 289

Query: 260 PKSSAIKVIDFGSTT------------------YERPDQNYIVSTRHYRAPEVILGLG-- 299
             S + K+ID G+                    Y  P+Q YI+ST+   AP   +     
Sbjct: 290 EGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQ-YIMSTQTPSAPSAPVATALS 348

Query: 300 ---WTYPC----DIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDR 352
              W        DI+S G I +++      F    +  +L    R         LKR D 
Sbjct: 349 PVLWQLNLPDRFDIYSAGLIFLQMA-----FPNLRSDSNLIQFNR--------QLKRNDY 395

Query: 353 HAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPT 412
               +  R  ++       R   + V+ L           D  AG    LL+ ++R+   
Sbjct: 396 DLVAW--RKLVEPRASPDLRRGFE-VLDL-----------DGGAG--WELLKSMMRFKGR 439

Query: 413 DRLTAREALRHPFFTRDHL 431
            R++A+ AL HP+F R+ L
Sbjct: 440 QRISAKAALAHPYFDREGL 458

Length = 566

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 48.9 bits (116), Expect = 2e-06
 Identities = 55/232 (23%), Positives = 103/232 (44%), Gaps = 38/232 (16%)

Query: 91  LGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQL 150
           L  N    Y++  ++G GT+G V +  +    E+ A+KI++ ++   + ++I+ E+   +
Sbjct: 3   LRRNPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIK-LEPGDDFSLIQQEIF--M 59

Query: 151 AKHDKGGNRCVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPID--LVREIARQ 207
            K  K  N      ++   R  + I  E  G  SL D      + + P+    +  + R+
Sbjct: 60  VKECKHCNIVAYFGSYLS-REKLWICMEYCGGGSLQDIY----HVTGPLSELQIAYVCRE 114

Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
            L+ +A++H    +H D+K  N+LL  +  +K+ D+                    A K+
Sbjct: 115 TLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADF------------------GVAAKI 156

Query: 268 IDFGSTTYERPDQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVEL 316
               +T  +R      + T ++ APEV       G+   CDIW+VG   +EL
Sbjct: 157 T---ATIAKRKS---FIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIEL 202

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 49.7 bits (118), Expect = 2e-06
 Identities = 57/251 (22%), Positives = 100/251 (39%), Gaps = 56/251 (22%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDR------ERKEMVAI------KIVRGIKKY-----REA 139
           + +++   +  G FG++  C  R      E +  V        K  R I K      R A
Sbjct: 148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAA 207

Query: 140 AMIEIEVLQ-QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKN--NYRSF 196
             +E E+L      H+      ++I        +  ++ +K    LY F+     +++  
Sbjct: 208 IQLENEILALGRLNHEN----ILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDR 263

Query: 197 P-IDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 255
           P +   R I +QLL  + ++HD  +IH D+K EN+ L         D K  L        
Sbjct: 264 PLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNC-------DGKIVLG------- 309

Query: 256 FKRMPKSSAIKVIDFGS-TTYERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGC 311
                        DFG+   +E+  + +    V T    +PE++ G G+    DIWS G 
Sbjct: 310 -------------DFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGL 356

Query: 312 ILVELCTGEAL 322
           IL+++ + +  
Sbjct: 357 ILLDMLSHDFC 367

Length = 501

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 49.3 bits (117), Expect = 2e-06
 Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 37/221 (16%)

Query: 103 SKMGEGTFGQVLECWDRERKEMVAIKIVR-GIK-KYREAAMIEIEVLQQLAKHDKGGNRC 160
           S++G G  G V +   +    ++A K++   IK   R   + E++VL     H+      
Sbjct: 11  SELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVL-----HECNSPYI 65

Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V     F     I I  E + G SL   L++   +  P +++ +++  +L  +A++ +  
Sbjct: 66  VGFYGAFYSDGEISICMEHMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLREKH 123

Query: 220 MI-HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
            I H D+KP N+L+ S   IK+ D+  S                   ++ID  + ++   
Sbjct: 124 QIMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF--- 162

Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                V TR Y +PE + G  ++   DIWS+G  LVEL  G
Sbjct: 163 -----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIG 198

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 49.0 bits (117), Expect = 2e-06
 Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 32/152 (21%)

Query: 175 IVFEKLGSSLYDFLRK--NNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVL 231
           I  E + +SL  F +K  +   + P D++ +IA  +++ + ++H  L +IH D+KP NVL
Sbjct: 77  ICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVL 136

Query: 232 LVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRA 291
           +  +  +K+ D+  S +              S  K ID G               + Y A
Sbjct: 137 INRNGQVKLCDFGISGYL-----------VDSVAKTIDAGC--------------KPYMA 171

Query: 292 PEVILG----LGWTYPCDIWSVGCILVELCTG 319
           PE I       G+    D+WS+G  ++EL TG
Sbjct: 172 PERINPELNQKGYDVKSDVWSLGITMIELATG 203

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 48.5 bits (116), Expect = 2e-06
 Identities = 61/255 (23%), Positives = 99/255 (38%), Gaps = 68/255 (26%)

Query: 105 MGEGTFGQVLECWDRERKEM---VAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGNR 159
           +G G FG V++     +      VA+K ++   I   ++  + E  V+ QL         
Sbjct: 3   LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQL--------- 53

Query: 160 CVQIRNWFDYRNHICIV----------------FEKLGSSLYDFLRKNNYRSFPIDLVRE 203
                      +H CIV                   LG  L  +L+K   R  P+  ++E
Sbjct: 54  -----------DHPCIVRLIGVCKGEPLMLVMELAPLGP-LLKYLKKR--REIPVSDLKE 99

Query: 204 IARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSS 263
           +A Q+   +A++     +H DL   NVLLV+    K+ D+  S      S Y++      
Sbjct: 100 LAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYR------ 153

Query: 264 AIKVIDFGSTTYER-PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEA 321
                   +TT  R P + Y        APE I    ++   D+WS G  L E  + G  
Sbjct: 154 --------ATTAGRWPLKWY--------APECINYGKFSSKSDVWSYGVTLWEAFSYGAK 197

Query: 322 LFQTHENLEHLAMME 336
            +   +  E +AM+E
Sbjct: 198 PYGEMKGAEVIAMLE 212

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 48.8 bits (116), Expect = 2e-06
 Identities = 53/229 (23%), Positives = 101/229 (44%), Gaps = 36/229 (15%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           +G G FG+V  C   +  +M A+K +      +K+    A+ E  +L  ++  D     C
Sbjct: 2   IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 61

Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           +     F   + +C + + + G  L+  L ++    F    +R  A +++  +  MH+  
Sbjct: 62  MTYA--FHTPDKLCFILDLMNGGDLHYHLSQHGV--FSEKEMRFYATEIILGLEHMHNRF 117

Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +++ DLKP N+LL    ++++ D   +        + K+ P +S                
Sbjct: 118 VVYRDLKPANILLDEHGHVRISDLGLA------CDFSKKKPHAS---------------- 155

Query: 280 QNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHE 327
               V T  Y APEV+  G  +    D +S+GC+L +L  G + F+ H+
Sbjct: 156 ----VGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHK 200

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 48.6 bits (116), Expect = 2e-06
 Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 37/225 (16%)

Query: 103 SKMGEGTFGQV-LECWD---RERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHDKGG 157
            ++G+G FG V L  +D       E+VA+K ++    ++      EIE+L+ L +HD   
Sbjct: 10  QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSL-QHDN-- 66

Query: 158 NRCVQIRN--WFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
              V+ +   +   R ++ +V E L   SL D+L+K+  R     L+   A Q+ + + +
Sbjct: 67  --IVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLL-LYASQICKGMEY 123

Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDFGST 273
           +     +H DL   N+L+ S   +K+ D+  +   P+D  Y+K R P  S I        
Sbjct: 124 LGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPI-------- 175

Query: 274 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                          + APE +    ++   D+WS G +L EL T
Sbjct: 176 --------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 206

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 48.4 bits (115), Expect = 3e-06
 Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 46/246 (18%)

Query: 104 KMGEGTFGQVLECWDRERK--EMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCV 161
           ++G G FG V +   + +K  + VA+KI   +K       ++ E+L       +  N   
Sbjct: 2   ELGSGNFGTVKKGMYKMKKSEKTVAVKI---LKNDNNDPALKDELL-------REANVMQ 51

Query: 162 QIRNWFDYRN-HIC------IVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
           Q+ N +  R   IC      +V E  +LG  L  FL+KN  +      + E+  Q+   +
Sbjct: 52  QLDNPYIVRMIGICEAESWMLVMELAELGP-LNKFLQKN--KHVTEKNITELVHQVSMGM 108

Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
            ++ +   +H DL   NVLLV+  Y K+ D+  S     D +Y+K               
Sbjct: 109 KYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK-------------AK 155

Query: 273 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEH 331
           T  + P + Y        APE +    ++   D+WS G ++ E    G+  ++  +  E 
Sbjct: 156 THGKWPVKWY--------APECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEV 207

Query: 332 LAMMER 337
             M+E 
Sbjct: 208 TQMIES 213

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 48.0 bits (114), Expect = 5e-06
 Identities = 57/236 (24%), Positives = 99/236 (41%), Gaps = 42/236 (17%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR----EAAMIEIEVLQQLAKHDKGGNRC 160
           +G+G+FG+V+    +E   + A+K+++     +    E  M E  +L     H       
Sbjct: 3   LGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHP----FL 58

Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
            Q+   F   + +  V E + G  L   ++K+  R F     R  A ++   + F+HD  
Sbjct: 59  TQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEITSALMFLHDKG 116

Query: 220 MIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 276
           +I+ DLK +NVLL    + K+ D+   K  +   K +S F                    
Sbjct: 117 IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTF-------------------- 156

Query: 277 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 332
                    T  Y APE++  + +    D W++G +L E+  G A F+  EN + L
Sbjct: 157 -------CGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEA-ENEDDL 204

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 47.4 bits (113), Expect = 6e-06
 Identities = 49/205 (23%), Positives = 81/205 (39%), Gaps = 57/205 (27%)

Query: 183 SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPD 242
           SL D LRK+    F I  + + A Q+   + ++     IH DL   N+LL S + +K+ D
Sbjct: 81  SLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGD 140

Query: 243 YKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR------APEVIL 296
           +             + +P++                + +Y V   H +      APE + 
Sbjct: 141 FGLM----------RALPQN----------------EDHY-VMEEHLKVPFAWCAPESLR 173

Query: 297 GLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAE 355
              +++  D+W  G  L E+ T GE               E   G     +LK++D+  E
Sbjct: 174 TRTFSHASDVWMFGVTLWEMFTYGE---------------EPWAGLSGSQILKKIDKEGE 218

Query: 356 KYVRRGRLDWPEGAASRESIKSVMK 380
                 RL+ PE  A  + I +VM 
Sbjct: 219 ------RLERPE--ACPQDIYNVML 235

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 47.1 bits (112), Expect = 6e-06
 Identities = 57/245 (23%), Positives = 108/245 (44%), Gaps = 41/245 (16%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYR--EAAMIEIEVLQQLAKHDKGGNRC 160
           +G+G FG+V  C  R   ++ A K +  + +KK +  E AM+E  +L ++  H +     
Sbjct: 1   LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKV--HSR---FI 55

Query: 161 VQIRNWFDYRNHICIVFEKLGSS-----LYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
           V +   F  +  +C+V   +        +Y+   +N    FP         Q++  +  +
Sbjct: 56  VSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENP--GFPEPRACFYTAQIISGLEHL 113

Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H   +I+ DLKPENVLL +   +++ D                     A+++ D  S T 
Sbjct: 114 HQRRIIYRDLKPENVLLDNDGNVRISDL------------------GLAVELKDGQSKT- 154

Query: 276 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH-ENLEHLAM 334
               + Y   T  + APE++ G  + +  D +++G  L E+      F+   E +E+  +
Sbjct: 155 ----KGY-AGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL 209

Query: 335 MERVL 339
            +R+L
Sbjct: 210 KQRIL 214

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 47.7 bits (113), Expect = 6e-06
 Identities = 56/226 (24%), Positives = 93/226 (41%), Gaps = 39/226 (17%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR----EAAMIEIEVLQQLAKHDKGGNRC 160
           +G+G+FG+V+    +   E+ AIKI++     +    E  M+E  VL    K        
Sbjct: 8   LGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPP----FL 63

Query: 161 VQIRNWFDYRNHICIVFEKL--GSSLYDFLRKNNYRS-FPIDLVREIARQLLECIAFMHD 217
            Q+ + F   + +  V E +  G  +Y   +   ++    +    EI+  L     F+H 
Sbjct: 64  TQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLF----FLHR 119

Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
             +I+ DLK +NV+L S  +IK+ D+               M K   +     G TT   
Sbjct: 120 RGIIYRDLKLDNVMLDSEGHIKIADFG--------------MCKEHMVD----GVTT--- 158

Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 323
                   T  Y APE+I    +    D W+ G +L E+  G+  F
Sbjct: 159 ---RTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF 201

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 47.5 bits (113), Expect = 6e-06
 Identities = 61/230 (26%), Positives = 97/230 (42%), Gaps = 41/230 (17%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYREAAMI--EIEVLQQLAKHDKGGNRC 160
           +G G FG+V     +   ++ A+KI+    + K  E A    E +VL        G  R 
Sbjct: 9   IGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLV------NGDRRW 62

Query: 161 V-QIRNWFDYRNHICIVFEK-LGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 218
           +  +   F   N++ +V +  +G  L   L K   R  P D+ R    +++  I  +H L
Sbjct: 63  ITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDR-LPEDMARFYLAEMVLAIDSVHQL 121

Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
             +H D+KP+NVLL  + +I++ D+ S L    D +                        
Sbjct: 122 GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTV----------------------- 158

Query: 279 DQNYIVSTRHYRAPEVIL----GLGWTYP-CDIWSVGCILVELCTGEALF 323
             N  V T  Y +PE++     G G   P CD WS+G  + E+  GE  F
Sbjct: 159 QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPF 208

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 46.1 bits (109), Expect = 1e-05
 Identities = 56/239 (23%), Positives = 99/239 (41%), Gaps = 32/239 (13%)

Query: 104 KMGEGTFGQVLECWDRERKEM--VAIKIVR--GIKKYREAAMIEIEVLQQLAKHDKGGNR 159
           ++G G FG V +   + RK+   VAIK+++    K  R+  M E E++ QL         
Sbjct: 2   ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDN-----PY 56

Query: 160 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
            V++    +    + ++    G  L  FL         +  V E+  Q+   + ++    
Sbjct: 57  IVRMIGVCEAEALMLVMEMASGGPLNKFLSGKK-DEITVSNVVELMHQVSMGMKYLEGKN 115

Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
            +H DL   NVLLV+  Y K+ D+  S     D SY+K               +  + P 
Sbjct: 116 FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYK-------------ARSAGKWPL 162

Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLAMMER 337
           + Y        APE I    ++   D+WS G  + E    G+  ++  +  E ++ +E+
Sbjct: 163 KWY--------APECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQ 213

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 46.2 bits (110), Expect = 1e-05
 Identities = 61/251 (24%), Positives = 106/251 (42%), Gaps = 39/251 (15%)

Query: 100 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 159
           +   ++G GT GQV +   ++   ++A+K +R      E   I +++   L  HD     
Sbjct: 18  ENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHD----- 72

Query: 160 C---VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 216
           C   V+   +F   + + I  E + + L D L K      P D++ ++   +++ + ++ 
Sbjct: 73  CPYIVKCYGYFITDSDVFICMELMSTCL-DKLLKRIQGPIPEDILGKMTVAIVKALHYLK 131

Query: 217 DL-CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           +   +IH D+KP N+LL +S  +K+ D+  S           R+  S A K    G   Y
Sbjct: 132 EKHGVIHRDVKPSNILLDASGNVKLCDFGIS----------GRLVDSKA-KTRSAGCAAY 180

Query: 276 ---ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 332
              ER D          RA             D+WS+G  LVEL TG+  F         
Sbjct: 181 MAPERIDPPDPNPKYDIRA-------------DVWSLGISLVELATGQ--FPYKNCKTEF 225

Query: 333 AMMERVLGPLP 343
            ++ ++L   P
Sbjct: 226 EVLTKILQEEP 236

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 46.4 bits (110), Expect = 2e-05
 Identities = 56/245 (22%), Positives = 106/245 (43%), Gaps = 37/245 (15%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR----EAAMIEIEVLQQLAKHDKGGNRC 160
           +G+G+FG+V+    +   E+ AIK+++     +    +  M E  +L   AKH       
Sbjct: 3   LGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHP----FL 58

Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
             +   F  ++ +  V E + G  L   ++++  R F     R  A ++   + F+H   
Sbjct: 59  TALHCCFQTKDRLFFVMEYVNGGDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHRHG 116

Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +I+ DLK +N+LL +  + K+ D+               M K   +     G TT     
Sbjct: 117 VIYRDLKLDNILLDAEGHCKLADFG--------------MCKEGILN----GVTT----- 153

Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT--HENLEHLAMMER 337
                 T  Y APE++  L +    D W++G ++ E+  G+  F+    ++L    + + 
Sbjct: 154 -TTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDD 212

Query: 338 VLGPL 342
           VL P+
Sbjct: 213 VLYPV 217

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 46.1 bits (109), Expect = 2e-05
 Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 36/229 (15%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           +G G FG+V  C   +  +M A+K +      +K+    A+ E  +L  ++  D     C
Sbjct: 2   IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 61

Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           +     F   + +  + + + G  L+  L ++    F    +R  A +++  +  MH+  
Sbjct: 62  MSYA--FHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEAEMRFYAAEIILGLEHMHNRF 117

Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +++ DLKP N+LL    ++++ D   +        + K+ P +S                
Sbjct: 118 VVYRDLKPANILLDEHGHVRISDLGLA------CDFSKKKPHAS---------------- 155

Query: 280 QNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHE 327
               V T  Y APEV+  G+ +    D +S+GC+L +L  G + F+ H+
Sbjct: 156 ----VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 200

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 45.8 bits (108), Expect = 2e-05
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)

Query: 103 SKMGEGTFGQVLECWDRERKEMVAIKIVR-GIK-KYREAAMIEIEVLQQLAKHDKGGNRC 160
           S++G G  G V +   +    ++A K++   IK   R   + E++VL     H+      
Sbjct: 11  SELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVL-----HECNSPYI 65

Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V     F     I I  E + G SL   L+K      P  ++ +++  +++ + ++ +  
Sbjct: 66  VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH 123

Query: 220 MI-HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
            I H D+KP N+L+ S   IK+ D+  S                   ++ID  + ++   
Sbjct: 124 KIMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF--- 162

Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                V TR Y +PE + G  ++   DIWS+G  LVE+  G
Sbjct: 163 -----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIG 198

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 45.3 bits (107), Expect = 3e-05
 Identities = 52/246 (21%), Positives = 92/246 (37%), Gaps = 61/246 (24%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAA--------MIEIEVLQQLAKHD-- 154
           +GEG FG+V++      K       V  +K  +E A        + E  +L+Q+      
Sbjct: 8   LGEGEFGKVVKATAFRLKGRAGYTTV-AVKMLKENASSSELRDLLSEFNLLKQVNHPHVI 66

Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKN----------------------N 192
           K    C Q     D    + + + K GS L  FLR++                      +
Sbjct: 67  KLYGACSQ-----DGPLLLIVEYAKYGS-LRSFLRESRKVGPSYLGSDGNRNSSYLDNPD 120

Query: 193 YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD 252
            R+  +  +   A Q+   + ++ ++ ++H DL   NVL+     +K+ D+  S    ++
Sbjct: 121 ERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEE 180

Query: 253 SSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCI 312
            SY KR      +K                      + A E +    +T   D+WS G +
Sbjct: 181 DSYVKRSKGRIPVK----------------------WMAIESLFDHIYTTQSDVWSFGVL 218

Query: 313 LVELCT 318
           L E+ T
Sbjct: 219 LWEIVT 224

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 45.5 bits (108), Expect = 3e-05
 Identities = 57/232 (24%), Positives = 95/232 (40%), Gaps = 51/232 (21%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKY-------REAAMIEIEVLQQLAKHDKGG 157
           +G+G+FG+V+    +   E+ AIKI   +KK         E  M+E  VL    K     
Sbjct: 8   LGKGSFGKVMLAERKGTDELYAIKI---LKKDVIIQDDDVECTMVEKRVLALPGK----P 60

Query: 158 NRCVQIRNWFDYRNHICIVFEKL--GSSLYDFLRKNNYRS-FPIDLVREIARQLLECIAF 214
               Q+ + F   + +  V E +  G  +Y   +   ++    +    EIA  L     F
Sbjct: 61  PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLF----F 116

Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           +H   +I+ DLK +NV+L +  +IK+ D+   K ++   K +  F   P           
Sbjct: 117 LHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFCGTP----------- 165

Query: 272 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 323
                    +YI       APE+I    +    D W+ G +L E+  G+  F
Sbjct: 166 ---------DYI-------APEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPF 201

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 44.9 bits (106), Expect = 3e-05
 Identities = 58/230 (25%), Positives = 97/230 (42%), Gaps = 41/230 (17%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRG--IKKYREAAMIEIEVLQQ 149
           S  KI   +G G FG+V  C  R     +R+  VAIK ++    +K R   + E  ++ Q
Sbjct: 4   SCIKIEKVIGAGEFGEV--CSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQ 61

Query: 150 LAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL 208
               +      + +         + IV E +   SL  FLRK++ +   I LV  + R +
Sbjct: 62  FDHPN-----IIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLV-GMLRGI 115

Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIK 266
              + ++ D+  +H DL   N+L+ S+   KV D+  S  L    +++Y  R  K     
Sbjct: 116 ASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK----- 170

Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 316
                            +  R + APE I    +T   D+WS G ++ E+
Sbjct: 171 -----------------IPIR-WTAPEAIAYRKFTSASDVWSYGIVMWEV 202

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 45.0 bits (106), Expect = 4e-05
 Identities = 64/252 (25%), Positives = 106/252 (42%), Gaps = 41/252 (16%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR----EAAMIEIEVLQQLAKHDKGGNRC 160
           +G+G+FG+V+    +   E+ AIKI++     +    E  M+E  VL    K        
Sbjct: 8   LGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPP----FL 63

Query: 161 VQIRNWFDYRNHICIVFEKL--GSSLYDFLRKNNYRS-FPIDLVREIARQLLECIAFMHD 217
            Q+ + F   + +  V E +  G  +Y   +   ++    +    EIA  L     F+H 
Sbjct: 64  TQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLF----FLHS 119

Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
             +I+ DLK +NV+L S  +IK+ D+               M K +       G TT   
Sbjct: 120 KGIIYRDLKLDNVMLDSEGHIKIADFG--------------MCKENMWD----GVTT--- 158

Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-AMME 336
                   T  Y APE+I    +    D W+ G +L E+  G+A F+  +  E   ++ME
Sbjct: 159 ---KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 215

Query: 337 RVLGPLPQHMLK 348
             +   P+ M K
Sbjct: 216 HNVA-YPKSMSK 226

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 44.7 bits (106), Expect = 5e-05
 Identities = 51/226 (22%), Positives = 93/226 (41%), Gaps = 34/226 (15%)

Query: 103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ-----LAKHDKGG 157
           + +G G FG+VL    ++  E+ AIK    +KK    A  E+E L          + +  
Sbjct: 5   AVLGRGHFGKVLLAEYKKTGELYAIKA---LKKGDIIARDEVESLMCEKRIFETANSERH 61

Query: 158 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
              V +   F   +H+C V E       D +   +   F        A  ++  + ++H+
Sbjct: 62  PFLVNLFACFQTEDHVCFVMEYAAGG--DLMMHIHTDVFSEPRAVFYAACVVLGLQYLHE 119

Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
             +++ DLK +N+LL +  ++K+ D+               + K      + FG  T   
Sbjct: 120 NKIVYRDLKLDNLLLDTEGFVKIADFG--------------LCKEG----MGFGDRT--- 158

Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 323
              +    T  + APEV+    +T   D W +G ++ E+  GE+ F
Sbjct: 159 ---STFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPF 201

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 44.4 bits (105), Expect = 6e-05
 Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 31/117 (26%)

Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           +H   +I+ DLKPEN+LL +  ++K+ D+   K S+H                      G
Sbjct: 116 LHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE---------------------G 154

Query: 272 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 328
           + T+          T  Y APE+++  G     D WS+G ++ ++ TG   F T EN
Sbjct: 155 TVTHT------FCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPF-TAEN 204

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 43.8 bits (103), Expect = 8e-05
 Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 29/138 (21%)

Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ D+K EN+LL S+ ++ + D+  S                      +F    
Sbjct: 121 LHKLGIIYRDIKLENILLDSNGHVVLTDFGLSK---------------------EFHEDE 159

Query: 275 YERPDQNYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEALFQTH-ENLEH 331
            ER        T  Y AP+++ G   G     D WS+G ++ EL TG + F    E    
Sbjct: 160 VERAYS--FCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQ 217

Query: 332 LAMMERVLG---PLPQHM 346
             +  R+L    P PQ M
Sbjct: 218 AEISRRILKSEPPYPQEM 235

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 43.9 bits (104), Expect = 8e-05
 Identities = 33/140 (23%), Positives = 59/140 (42%), Gaps = 26/140 (18%)

Query: 183 SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPD 242
           SL  FLR+N+ +     LV  + R +   + ++ ++  +H DL   N+L+ S+   KV D
Sbjct: 91  SLDKFLRENDGKFTVGQLVG-MLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSD 149

Query: 243 YKSSLHT-PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWT 301
           +  S      +++Y  +  K                           + APE I    +T
Sbjct: 150 FGLSRRLEDSEATYTTKGGKIPI-----------------------RWTAPEAIAYRKFT 186

Query: 302 YPCDIWSVGCILVELCT-GE 320
              D+WS G ++ E+ + GE
Sbjct: 187 SASDVWSFGIVMWEVMSYGE 206

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 44.2 bits (104), Expect = 8e-05
 Identities = 43/185 (23%), Positives = 75/185 (40%), Gaps = 43/185 (23%)

Query: 181 GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKV 240
           G  ++  L + +   F  D VR  + +++  +  +H L +++ D+K EN+LL S  ++ +
Sbjct: 89  GGEMFTHLYQRDN--FSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVL 146

Query: 241 PDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG 297
            D+   K  L   K+ +Y              F  T               Y APE+I G
Sbjct: 147 TDFGLSKEFLSEEKERTY-------------SFCGTI-------------EYMAPEIIRG 180

Query: 298 -LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER-----------VLGPLPQH 345
             G     D WS+G ++ EL TG + F         + + R            +GP  Q 
Sbjct: 181 KGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPSFIGPEAQD 240

Query: 346 MLKRV 350
           +L ++
Sbjct: 241 LLHKL 245

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 42.9 bits (101), Expect = 1e-04
 Identities = 61/254 (24%), Positives = 108/254 (42%), Gaps = 57/254 (22%)

Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAK------HDKGG 157
           ++G G FG V++      +  VAIK+++      E +M E E +++ AK      H+K  
Sbjct: 11  ELGTGQFG-VVKYGKWRGQYDVAIKMIK------EGSMSEDEFIEE-AKVMMKLSHEK-- 60

Query: 158 NRCVQIRNWFDYRNHICIVFEKLGSS-LYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 216
              VQ+      +  I IV E + +  L ++LR++  R  P  L+ E+ + + E +A++ 
Sbjct: 61  --LVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLL-EMCKDVCEGMAYLE 117

Query: 217 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 276
               IH DL   N L+                                +KV DFG + Y 
Sbjct: 118 SKQFIHRDLAARNCLVDD---------------------------QGCVKVSDFGLSRYV 150

Query: 277 RPDQNYIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEA---LFQTHE 327
             D+ Y  S        +  PEV+L   ++   D+W+ G ++ E+ + G+     F   E
Sbjct: 151 LDDE-YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE 209

Query: 328 NLEHLAMMERVLGP 341
            +E ++   R+  P
Sbjct: 210 TVEKVSQGLRLYRP 223

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 43.1 bits (101), Expect = 2e-04
 Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 25/125 (20%)

Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H   M+H DLK  N+ L+ +  IK+ D+  S       S             +D  S+ 
Sbjct: 185 VHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS-------------LDVASS- 230

Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                      T +Y APE+     ++   D+WS+G IL EL T    F+     E   +
Sbjct: 231 --------FCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE---I 279

Query: 335 MERVL 339
           M++VL
Sbjct: 280 MQQVL 284

Length = 478

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 42.5 bits (100), Expect = 2e-04
 Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 25/132 (18%)

Query: 196 FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 255
           F    VR    +++  +  +H L +I+ D+K EN+LL S  ++ + D+  S         
Sbjct: 102 FTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSK-------- 153

Query: 256 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCIL 313
                        +F +   ER        T  Y APEVI G   G     D WS+G + 
Sbjct: 154 -------------EFLAEEEER--AYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLT 198

Query: 314 VELCTGEALFQT 325
            EL TG + F  
Sbjct: 199 FELLTGASPFTV 210

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 42.2 bits (99), Expect = 3e-04
 Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 40/225 (17%)

Query: 105 MGEGTFGQVLEC-WDRE---RKEMVAIKIVRGIKKYREAAMI--EIEVLQQLAKHD--KG 156
           +GEG FG+V  C +D E     E VA+K ++        A +  EIE+L+ L   +  K 
Sbjct: 12  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 71

Query: 157 GNRCVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREI--ARQLLECIA 213
              C +     D  N I ++ E L S SL ++L +N  +   I+L +++  A Q+ + + 
Sbjct: 72  KGICTE-----DGGNGIKLIMEFLPSGSLKEYLPRNKNK---INLKQQLKYAVQICKGMD 123

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++     +H DL   NVL+ S   +K+ D+  +     D  Y+                T
Sbjct: 124 YLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYY----------------T 167

Query: 274 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
             +  D     S   + APE ++   +    D+WS G  L EL T
Sbjct: 168 VKDDLD-----SPVFWYAPECLIQSKFYIASDVWSFGVTLYELLT 207

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 42.1 bits (99), Expect = 3e-04
 Identities = 61/254 (24%), Positives = 101/254 (39%), Gaps = 40/254 (15%)

Query: 101 IHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLA--KHDKGGN 158
           +  K+G G +G+V E   ++    VA+K ++      E  M   E L++ A  K  K  N
Sbjct: 10  MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK------EDTMEVEEFLKEAAVMKEIKHPN 63

Query: 159 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             VQ+           I+ E +   +L D+LR+ N +     ++  +A Q+   + ++  
Sbjct: 64  -LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 122

Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
              IH DL   N L+  +  +KV D+  S       +Y         IK           
Sbjct: 123 KNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK----------- 170

Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLE 330
                      + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE
Sbjct: 171 -----------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE 219

Query: 331 HLAMMERVLGPLPQ 344
               MER  G  P+
Sbjct: 220 KGYRMERPEGCPPK 233

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 42.5 bits (100), Expect = 4e-04
 Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 29/141 (20%)

Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L  +  +H   MIH D+K  N+LL S+  +K+ D+            F +M   +A  
Sbjct: 151 QVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFG-----------FSKM--YAATV 197

Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
             D G T            T +Y APE+     ++   D++S+G +L EL T +  F   
Sbjct: 198 SDDVGRT---------FCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDG- 247

Query: 327 ENLEHLAMMERVLG----PLP 343
           EN+E +  M + L     PLP
Sbjct: 248 ENMEEV--MHKTLAGRYDPLP 266

Length = 496

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 41.6 bits (97), Expect = 5e-04
 Identities = 58/239 (24%), Positives = 103/239 (43%), Gaps = 51/239 (21%)

Query: 101 IHSKMGEGTFGQVL--ECWD---RERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHD 154
           +  ++GEG FG+V   EC++    + K +VA+K ++      R+    E E+L  L +H+
Sbjct: 9   LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-QHE 67

Query: 155 ---KGGNRCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSF-------PIDLVR- 202
              K    CV+        + + +VFE +    L  FLR +   +        P +L + 
Sbjct: 68  HIVKFYGVCVE-------GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQS 120

Query: 203 ---EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM 259
               IA+Q+   + ++     +H DL   N L+  +  +K+ D+  S             
Sbjct: 121 QMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSR------------ 168

Query: 260 PKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                    D  ST Y R   + ++  R +  PE I+   +T   D+WS+G +L E+ T
Sbjct: 169 ---------DVYSTDYYRVGGHTMLPIR-WMPPESIMYRKFTTESDVWSLGVVLWEIFT 217

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 41.0 bits (96), Expect = 6e-04
 Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 35/225 (15%)

Query: 100 KIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLAK 152
           KI   +G G FG+V  C  R     +R+  VAIK ++    +K R   + E  ++ Q   
Sbjct: 7   KIEEVIGAGEFGEV--CRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH 64

Query: 153 HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
            +      + +         + I+ E +   +L  FLR+N+ +   I LV  + R +   
Sbjct: 65  PN-----IIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLV-GMLRGIAAG 118

Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           + ++ ++  +H DL   N+L+ S+   KV D+  S     D+S                 
Sbjct: 119 MKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS----------------- 161

Query: 272 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 316
             TY       I     + APE I    +T   D+WS G ++ E+
Sbjct: 162 DPTYTSSLGGKI--PIRWTAPEAIAYRKFTSASDVWSYGIVMWEV 204

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 40.9 bits (96), Expect = 6e-04
 Identities = 55/233 (23%), Positives = 92/233 (39%), Gaps = 50/233 (21%)

Query: 97  SRYKIHSKMGEGTFGQVLE-CWDRERKEMVAIKIV-RGIKKYREAAMIEIEVLQQLAKHD 154
             + +  K+G G FG+V E  W    +  VAIKI+       ++    E++ L++L +H 
Sbjct: 6   EEFTLERKLGSGYFGEVWEGLWKNRVR--VAIKILKSDDLLKQQDFQKEVQALKRL-RHK 62

Query: 155 K--------GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIAR 206
                         V I         I  + EK   SL  FLR    +  P+  + ++A 
Sbjct: 63  HLISLFAVCSVGEPVYI---------ITELMEK--GSLLAFLRSPEGQVLPVASLIDMAC 111

Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYI-KVPDYKSSLHTPKDSSYFKRMPKSSAI 265
           Q+ E +A++ +   IH DL   N+ LV  + + KV D+  +    K+  Y   +     I
Sbjct: 112 QVAEGMAYLEEQNSIHRDLAARNI-LVGEDLVCKVADFGLA-RLIKEDVY---LSSDKKI 166

Query: 266 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                                  + APE      ++   D+WS G +L E+ T
Sbjct: 167 PY--------------------KWTAPEAASHGTFSTKSDVWSFGILLYEMFT 199

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 41.3 bits (97), Expect = 7e-04
 Identities = 59/231 (25%), Positives = 98/231 (42%), Gaps = 45/231 (19%)

Query: 17  RPRKRARLGWDVPQV-PKAQVGLFCGQEVGNVTSFAPPRAPSDHVTSSSLFVKGVARNGS 75
           RPR+R  L   +PQ  P   V L             PP + S   +SSS    G A + +
Sbjct: 23  RPRRRPDLTLPLPQRDPSLAVPL----------PLPPPSSSSSSSSSSS--ASGSAPSAA 70

Query: 76  PPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK 135
               E ++                   +++G G  G V +   R    + A+K++ G  +
Sbjct: 71  KSLSELERV------------------NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHE 112

Query: 136 --YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNN 192
              R     EIE+L+    H       V+  + FD+   I ++ E + G SL        
Sbjct: 113 DTVRRQICREIEILRD-VNHPN----VVKCHDMFDHNGEIQVLLEFMDGGSLEG--THIA 165

Query: 193 YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY 243
              F  D+    ARQ+L  IA++H   ++H D+KP N+L+ S++ +K+ D+
Sbjct: 166 DEQFLADV----ARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADF 212

Length = 353

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 41.4 bits (97), Expect = 0.001
 Identities = 42/176 (23%), Positives = 69/176 (39%), Gaps = 46/176 (26%)

Query: 197 PIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF 256
             +  R +  Q+L+ +A  H+  ++H DLKP+N+++  +                     
Sbjct: 78  AGETGRLML-QVLDALACAHNQGIVHRDLKPQNIMVSQTG-------------------- 116

Query: 257 KRMPKSSAIKVIDFGSTT----YERPDQNYI------VSTRHYRAPEVILGLGWTYPCDI 306
                    KV+DFG  T        D   +      + T  Y APE + G   T   D+
Sbjct: 117 ----VRPHAKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDL 172

Query: 307 WSVGCILVELCTGEALFQTHENLEHLAMMERVLGP----LPQ----HMLKRVDRHA 354
           ++ G I +E  TG+ + Q     E   ++ + L P    LP     H L +V R A
Sbjct: 173 YAWGLIFLECLTGQRVVQGASVAE---ILYQQLSPVDVSLPPWIAGHPLGQVLRKA 225

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 40.3 bits (94), Expect = 0.001
 Identities = 54/234 (23%), Positives = 98/234 (41%), Gaps = 36/234 (15%)

Query: 105 MGEGTFGQVLECWDRE--RKEM-VAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGNR 159
           +G G FG+V     +   RKE+ VAIK ++    +K R+  + E  ++ Q + H+     
Sbjct: 13  IGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHN----- 67

Query: 160 CVQIRNWFDYRNHICIVFEKLGSSLYD-FLRKNNYRSFPIDLVREIARQLLECIAFMHDL 218
            +++           I+ E + +   D +LR ++       LV  + R +   + ++ D+
Sbjct: 68  IIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLV-GMLRGIAAGMKYLSDM 126

Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI-DFGSTTYER 277
             +H DL   N+L+ S+   KV D+  S                   +V+ D    TY  
Sbjct: 127 NYVHRDLAARNILVNSNLECKVSDFGLS-------------------RVLEDDPEGTYTT 167

Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 330
                 +    + APE I    +T   D+WS G ++ E+ + GE  +    N E
Sbjct: 168 SGGKIPI---RWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE 218

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 50/230 (21%), Positives = 94/230 (40%), Gaps = 48/230 (20%)

Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           ++G+G +G V +   R     +A+K +R      K+ +  M E+++L     H       
Sbjct: 8   ELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIM-ELDIL-----HKAVSPYI 61

Query: 161 VQIRNWFDYRN--HICIVFEKLGS--SLYDFLRKNNYRSFPIDLVREIARQLLECIAFM- 215
           V     F      ++C+ +   GS   LY           P D++R I   +++ + F+ 
Sbjct: 62  VDFYGAFFIEGAVYMCMEYMDAGSLDKLYA--GGVATEGIPEDVLRRITYAVVKGLKFLK 119

Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
            +  +IH D+KP NVL+  +  +K+ D+  S       +    + K++            
Sbjct: 120 EEHNIIHRDVKPTNVLVNGNGQVKLCDFGVS------GNLVASLAKTN------------ 161

Query: 276 ERPDQNYIVSTRHYRAPEVILGLG------WTYPCDIWSVGCILVELCTG 319
                   +  + Y APE I   G      +T   D+WS+G  ++E+  G
Sbjct: 162 --------IGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALG 203

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 40.9 bits (96), Expect = 0.001
 Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 10/109 (9%)

Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS--SAIKVID 269
           I ++H   ++H DLKP+N+LL     + + D+ +++        FK++ +     I V +
Sbjct: 126 IEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAI--------FKKLEEEDLLDIDVDE 177

Query: 270 FGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                        IV T  Y APE +LG+  +   DI+++G IL ++ T
Sbjct: 178 RNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLT 226

Length = 932

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 39.7 bits (93), Expect = 0.001
 Identities = 66/268 (24%), Positives = 103/268 (38%), Gaps = 58/268 (21%)

Query: 103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 162
           + +G+G FG V+    R +K  VA+K ++      +A + E  V+  L +H       VQ
Sbjct: 12  ATIGKGEFGDVMLGDYRGQK--VAVKCLKDDSTAAQAFLAEASVMTTL-RHPN----LVQ 64

Query: 163 IRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 221
           +       N + IV E +   SL D+LR        +      A  + E + ++ +   +
Sbjct: 65  LLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFV 124

Query: 222 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 281
           H DL   NV LVS + +                           KV DFG        Q+
Sbjct: 125 HRDLAARNV-LVSEDLVA--------------------------KVSDFGLAKEASQGQD 157

Query: 282 YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGP 341
                  + APE +    ++   D+WS G +L E+ +                  RV  P
Sbjct: 158 SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS----------------FGRV--P 199

Query: 342 LPQHMLKRVDRHAEK-YVRRGRLDWPEG 368
            P+  LK V  H EK Y    R++ PEG
Sbjct: 200 YPRIPLKDVVPHVEKGY----RMEAPEG 223

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional

 Score = 39.7 bits (92), Expect = 0.003
 Identities = 14/50 (28%), Positives = 34/50 (68%)

Query: 198 IDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL 247
           I++++ + RQ+L  +  +H + ++H D+KPEN+L+     +K+ D+ +++
Sbjct: 308 INVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAV 357

Length = 507

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 39.2 bits (91), Expect = 0.003
 Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 25/137 (18%)

Query: 183 SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPD 242
           SL D +R++     P   +     Q+ + + ++ +  M+H +L   N+LL S   +++ D
Sbjct: 94  SLLDHVRQHRDSLDP-QRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIAD 152

Query: 243 YK-SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWT 301
           +  + L  P D  YF    K+  IK                      + A E IL   +T
Sbjct: 153 FGVADLLYPDDKKYFYSEHKTP-IK----------------------WMALESILFGRYT 189

Query: 302 YPCDIWSVGCILVELCT 318
           +  D+WS G  + E+ +
Sbjct: 190 HQSDVWSYGVTVWEMMS 206

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 38.8 bits (90), Expect = 0.003
 Identities = 54/248 (21%), Positives = 97/248 (39%), Gaps = 54/248 (21%)

Query: 98  RYKIHSKMGEGTFGQVLECWDR--------------ERKEMVAIKIVRG--IKKYREAAM 141
           + ++  K+GEG FG+V  C                  +  +VA+K++R    K  R   +
Sbjct: 6   QLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFL 65

Query: 142 IEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRK---------- 190
            EI+++ +L   +      V + +     + +C++ E +    L  FL +          
Sbjct: 66  KEIKIMSRLKNPNIIRLLGVCVSD-----DPLCMITEYMENGDLNQFLSQREIESTFTHA 120

Query: 191 NNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP 250
           NN  S  I  +  +A Q+   + ++  L  +H DL   N L+ +   IK+ D+  S    
Sbjct: 121 NNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSR--- 177

Query: 251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVG 310
                             +  S  Y R     ++  R + A E IL   +T   D+W+ G
Sbjct: 178 ------------------NLYSGDYYRIQGRAVLPIR-WMAWESILLGKFTTASDVWAFG 218

Query: 311 CILVELCT 318
             L E+ T
Sbjct: 219 VTLWEMFT 226

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 38.7 bits (90), Expect = 0.003
 Identities = 36/161 (22%), Positives = 69/161 (42%), Gaps = 19/161 (11%)

Query: 199 DLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKR 258
           D+++ +A ++   + ++H    IH+DL   N  L +   +K+ DY  +L    +  Y  +
Sbjct: 100 DVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITK 159

Query: 259 MPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
              +  ++ +         P+   +V  R       +L    T   +IWS+G  + EL T
Sbjct: 160 DCHAVPLRWLA--------PE---LVEIRGQD----LLPKDQTKKSNIWSLGVTMWELFT 204

Query: 319 -GEALFQTHENLEHLA--MMERVLG-PLPQHMLKRVDRHAE 355
             +  +    + + L   + E+ +  P PQ  LK  DR  E
Sbjct: 205 AADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYE 245

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 39.5 bits (92), Expect = 0.004
 Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 14/142 (9%)

Query: 108 GTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQL-AKHD----KGGNRCVQ 162
           G FG+V     +   ++ A+K+V+      +A MI   ++ Q+ A+ D          V 
Sbjct: 15  GAFGKVYLGRKKNNSKLYAVKVVK------KADMINKNMVHQVQAERDALALSKSPFIVH 68

Query: 163 IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 221
           +       N++ +V E L G  +   L    Y  F  ++  +   ++   + ++H   +I
Sbjct: 69  LYYSLQSANNVYLVMEYLIGGDVKSLLHIYGY--FDEEMAVKYISEVALALDYLHRHGII 126

Query: 222 HTDLKPENVLLVSSEYIKVPDY 243
           H DLKP+N+L+ +  +IK+ D+
Sbjct: 127 HRDLKPDNMLISNEGHIKLTDF 148

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 38.4 bits (89), Expect = 0.004
 Identities = 53/219 (24%), Positives = 88/219 (40%), Gaps = 37/219 (16%)

Query: 100 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 159
           K+   +G+G FG V+    R  K  VA+K ++      +A + E  V+ QL +H      
Sbjct: 9   KLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKN-DATAQAFLAEASVMTQL-RHSN---- 60

Query: 160 CVQIRNWF-DYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
            VQ+     + +  + IV E +   SL D+LR         D + + +  + E + ++  
Sbjct: 61  LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEA 120

Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
              +H DL   NV LVS + +                           KV DFG T    
Sbjct: 121 NNFVHRDLAARNV-LVSEDNVA--------------------------KVSDFGLTKEAS 153

Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 316
             Q+       + APE +    ++   D+WS G +L E+
Sbjct: 154 STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 192

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	433
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
PTZ00284	467	protein kinase; Provisional	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
KOG1290	590	consensus Serine/threonine protein kinase [Signal	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
KOG0696	683	consensus Serine/threonine protein kinase [Signal	100.0
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	100.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
KOG0695	593	consensus Serine/threonine protein kinase [Signal	100.0
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
PLN03224	507	probable serine/threonine protein kinase; Provisio	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG1167	418	consensus Serine/threonine protein kinase of the C	100.0
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
KOG2052	513	consensus Activin A type IB receptor, serine/threo	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
KOG3653	534	consensus Transforming growth factor beta/activin	100.0
KOG1027	903	consensus Serine/threonine protein kinase and endo	100.0
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
KOG1152	772	consensus Signal transduction serine/threonine kin	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG0576	829	consensus Mitogen-activated protein kinase kinase	100.0
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	100.0
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.98
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.97
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.97
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.97
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.97
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.96
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.96
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.95
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.95
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.95
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.94
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.94
PRK09188	365	serine/threonine protein kinase; Provisional	99.93
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.93
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.9
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.9
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.9
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.89
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.89
PRK12274	218	serine/threonine protein kinase; Provisional	99.87
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.87
PRK10345	210	hypothetical protein; Provisional	99.87
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.85
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.83
smart00090	237	RIO RIO-like kinase.	99.82
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.82
PRK14879	211	serine/threonine protein kinase; Provisional	99.78
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.76
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.75
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.74
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.73
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.72
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.71
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.71
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.66
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.65
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.65
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.53
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.49
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.47
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.43
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.38
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.36
KOG3087	229	consensus Serine/threonine protein kinase [General	99.25
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.21
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	99.14
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.12
KOG1243	690	consensus Protein kinase [General function predict	99.05
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	99.04
KOG2137	700	consensus Protein kinase [Signal transduction mech	99.01
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.97
COG4248	637	Uncharacterized protein with protein kinase and he	98.83
PRK09902	216	hypothetical protein; Provisional	98.8
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.78
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.65
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.63
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.62
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.6
PF01636	239	APH: Phosphotransferase enzyme family This family	98.57
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.55
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.42
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	98.35
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	98.3
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.09
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	98.06
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	98.06
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.06
PLN02876	822	acyl-CoA dehydrogenase	97.99
KOG1235	538	consensus Predicted unusual protein kinase [Genera	97.97
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.9
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.72
KOG2270	520	consensus Serine/threonine protein kinase involved	97.68
PRK05231	319	homoserine kinase; Provisional	97.62
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	97.58
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	97.56
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.55
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.52
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	97.36
PRK12396	409	5-methylribose kinase; Reviewed	97.18
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	97.14
KOG1093	725	consensus Predicted protein kinase (contains TBC a	97.12
KOG2268	465	consensus Serine/threonine protein kinase [Signal	97.08
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	97.03
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	96.79
PRK11768	325	serine/threonine protein kinase; Provisional	96.78
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	96.72
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	96.71
PLN02236	344	choline kinase	96.69
PRK10593	297	hypothetical protein; Provisional	96.66
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	96.65
PLN02756	418	S-methyl-5-thioribose kinase	96.41
COG2334	331	Putative homoserine kinase type II (protein kinase	96.06
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	95.99
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	95.95
KOG1236	565	consensus Predicted unusual protein kinase [Genera	95.66
PRK06148	1013	hypothetical protein; Provisional	95.56
KOG2269	531	consensus Serine/threonine protein kinase [Signal	95.32
PTZ00384	383	choline kinase; Provisional	95.24
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	94.96
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	94.72
PRK06149	972	hypothetical protein; Provisional	94.48

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-62  Score=450.62  Aligned_cols=350  Identities=60%  Similarity=1.025  Sum_probs=315.4

Q ss_pred             cCCCCCCCCcCCCCCCceeecCceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHH
Q 013973           71 ARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQL  150 (433)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l  150 (433)
                      ++...+++..++..|++.+..++.+.++|.++.++|+|.||.|..|.+..++..||||+++...+.++....|+++|+++
T Consensus        63 ~~~~~~~~~~dD~dGH~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki  142 (415)
T KOG0671|consen   63 ARLESRPGRPDDKDGHYVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKI  142 (415)
T ss_pred             ccccCCCCCCCCCCceEEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            56667788889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcC-CCCCceEEecceeecCCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCc
Q 013973          151 AKHD-KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPEN  229 (433)
Q Consensus       151 ~~~~-~~~~~i~~~~~~~~~~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~N  229 (433)
                      .++. ++...|+++.+||+..++.|||+|.+|-++.++|..++..+++...++.++.|++.+++|||+.+++|-||||+|
T Consensus       143 ~~~DP~g~~rcv~m~~wFdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPEN  222 (415)
T KOG0671|consen  143 NESDPNGKFRCVQMRDWFDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPEN  222 (415)
T ss_pred             HhcCCCCceEEEeeehhhhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChhe
Confidence            7766 455669999999999999999999999999999999988999999999999999999999999999999999999


Q ss_pred             eEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHH
Q 013973          230 VLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSV  309 (433)
Q Consensus       230 ILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSl  309 (433)
                      ||+.+..+.++-+.+-.       .++.+..++..++++|||.|+......+.++.|..|.|||++++-+++.++||||+
T Consensus       223 ILfvss~~~~~~~~k~~-------~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSi  295 (415)
T KOG0671|consen  223 ILFVSSEYFKTYNPKKK-------VCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSI  295 (415)
T ss_pred             EEEeccceEEEeccCCc-------cceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceee
Confidence            99999888777665543       12233356778999999999999888899999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHh
Q 013973          310 GCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM  389 (433)
Q Consensus       310 Gv~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (433)
                      ||||+||.+|...|+..++.+.+++|..++|++|..+..+..  .++|...|.++||+...... .+.+.+.........
T Consensus       296 GCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~--~~Kyf~~~rldw~e~~~~~~-~k~v~~~ckpl~~~~  372 (415)
T KOG0671|consen  296 GCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTR--KEKYFRRGRLDWPEVSSKGK-SKYVFEPCKPLKKYM  372 (415)
T ss_pred             eeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhh--hHhhhhcccccCcccccccc-chhhhcCCccHHHHh
Confidence            999999999999999999999999999999999999988765  78888889999999887664 445555555555666


Q ss_pred             hhcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          390 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       390 ~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      ...+....++.|||++||..||.+|+|+.|+|.||||+...
T Consensus       373 ~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~  413 (415)
T KOG0671|consen  373 LQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARLT  413 (415)
T ss_pred             ccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcCC
Confidence            66677778899999999999999999999999999998754

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=9.9e-60  Score=437.20  Aligned_cols=262  Identities=29%  Similarity=0.516  Sum_probs=220.1

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh--------hHHHHHHHHHHHHHHHhcCCCCCceEEecc
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK--------YREAAMIEIEVLQQLAKHDKGGNRCVQIRN  165 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--------~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~  165 (433)
                      .+.+.|.+.+.||+|+||.|-+|..+.||+.||||++.+.+.        ......+|+++|+++     +||+||++++
T Consensus       169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL-----~HP~IV~~~d  243 (475)
T KOG0615|consen  169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKL-----SHPNIVRIKD  243 (475)
T ss_pred             hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhc-----CCCCEEEEee
Confidence            356779999999999999999999999999999999974321        122346899999999     8899999999


Q ss_pred             eeecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCc
Q 013973          166 WFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  244 (433)
Q Consensus       166 ~~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg  244 (433)
                      +|+..+..||||||+ ||+|.+++..++  .+.+...+.+++|++.||.|||++||+||||||+|||+..+         
T Consensus       244 ~f~~~ds~YmVlE~v~GGeLfd~vv~nk--~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~---------  312 (475)
T KOG0615|consen  244 FFEVPDSSYMVLEYVEGGELFDKVVANK--YLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSND---------  312 (475)
T ss_pred             eeecCCceEEEEEEecCccHHHHHHhcc--ccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccC---------
Confidence            999999999999999 999999998875  79999999999999999999999999999999999999643         


Q ss_pred             CCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCC---CCCcchhHHHHHHHHHHHhC
Q 013973          245 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTG  319 (433)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGv~l~elltg  319 (433)
                                     .++..+||+|||+|...+...  .+.|||+.|.|||++.+..   +..++|+||+||+||.+++|
T Consensus       313 ---------------~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG  377 (475)
T KOG0615|consen  313 ---------------AEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSG  377 (475)
T ss_pred             ---------------CcceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEecc
Confidence                           356789999999998876433  5689999999999998765   34588999999999999999


Q ss_pred             CCCCCCCChHH-HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhH
Q 013973          320 EALFQTHENLE-HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  398 (433)
Q Consensus       320 ~~Pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (433)
                      .+||.+..... ...+                       |.+|.+.+-+                      ..|...+.+
T Consensus       378 ~pPFS~~~~~~sl~eQ-----------------------I~~G~y~f~p----------------------~~w~~Isee  412 (475)
T KOG0615|consen  378 YPPFSEEYTDPSLKEQ-----------------------ILKGRYAFGP----------------------LQWDRISEE  412 (475)
T ss_pred             CCCcccccCCccHHHH-----------------------HhcCcccccC----------------------hhhhhhhHH
Confidence            99998654322 2222                       3344333221                      234567889


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhcCCCCCCCCC
Q 013973          399 LTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL  431 (433)
Q Consensus       399 ~~~li~~~L~~dP~~R~ta~ell~hp~f~~~~~  431 (433)
                      +.+||.+||.+||++|||++|+|+||||+....
T Consensus       413 a~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~  445 (475)
T KOG0615|consen  413 ALDLINWMLVVDPENRPSADEALNHPWFKDAPC  445 (475)
T ss_pred             HHHHHHHhhEeCcccCcCHHHHhcChhhhcccc
Confidence            999999999999999999999999999996653

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=1.5e-57  Score=447.13  Aligned_cols=326  Identities=39%  Similarity=0.701  Sum_probs=272.3

Q ss_pred             CCCCCCceeecCceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhc-CCCCCc
Q 013973           81 DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKH-DKGGNR  159 (433)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~-~~~~~~  159 (433)
                      ++..+.|.+...+.+..+|.+++.||+|+||.|.+|.+..|++.||||+++..+....+...|+.+|..+..+ ..+..|
T Consensus       170 ~~~~~dY~~v~~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n  249 (586)
T KOG0667|consen  170 DDEDGDYQLVVNDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYN  249 (586)
T ss_pred             CCCCCceeEEecceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCee
Confidence            3455667888888888899999999999999999999999999999999998888889999999999999844 345578


Q ss_pred             eEEecceeecCCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccc
Q 013973          160 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIK  239 (433)
Q Consensus       160 i~~~~~~~~~~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~  239 (433)
                      +|.++++|...+++|||+|.+..+|.++|+.+....|+...++.++.||+.||.+||+.||||+||||+||||.+     
T Consensus       250 ~Vrm~d~F~fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~-----  324 (586)
T KOG0667|consen  250 IVRMLDYFYFRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKD-----  324 (586)
T ss_pred             EEEeeeccccccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeecc-----
Confidence            999999999999999999999999999999998889999999999999999999999999999999999999965     


Q ss_pred             cCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhC
Q 013973          240 VPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG  319 (433)
Q Consensus       240 i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg  319 (433)
                                          .....+||+|||.+++....-.+.+-+..|.|||+|.|.+|+.+.||||||||++||++|
T Consensus       325 --------------------~~r~~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG  384 (586)
T KOG0667|consen  325 --------------------PKRSRIKVIDFGSSCFESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTG  384 (586)
T ss_pred             --------------------CCcCceeEEecccccccCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcC
Confidence                                334589999999999988777778899999999999999999999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhc-cCcccCCCCccch------h--h----Hhhhccch-hHH
Q 013973          320 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVR-RGRLDWPEGAASR------E--S----IKSVMKLP-RLQ  385 (433)
Q Consensus       320 ~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~------~--~----~~~~~~~~-~~~  385 (433)
                      .+.|.+.+..++++.|.+.+|.+|..+++.....-..+-. .+.+.........      +  .    .......+ ...
T Consensus       385 ~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~  464 (586)
T KOG0667|consen  385 EPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSR  464 (586)
T ss_pred             ccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCc
Confidence            9999999999999999999999999999988776443333 2322211111100      0  0    00111112 122


Q ss_pred             HHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCCCCC
Q 013973          386 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL  431 (433)
Q Consensus       386 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~~~  431 (433)
                      .+...........+.|||.+||.+||.+|+|+.|+|+||||+...+
T Consensus       465 ~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~~~  510 (586)
T KOG0667|consen  465 SLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGTSL  510 (586)
T ss_pred             ccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcccccccc
Confidence            2222222244567899999999999999999999999999996544

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-57  Score=420.41  Aligned_cols=253  Identities=28%  Similarity=0.475  Sum_probs=216.6

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .++|++++.||+|+||+||+++.+++++.||+|++++..    +..+....|..+|..+     +||+||.+...|++..
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v-----~hPFiv~l~ysFQt~~   98 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKI-----KHPFIVKLIYSFQTEE   98 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhC-----CCCcEeeeEEecccCC
Confidence            367999999999999999999999999999999997543    2345567899999987     8899999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+|||+||+ ||.|+.+|++.+  .|++..++.|+.+|+.||.|||++|||||||||+|||++.                
T Consensus        99 kLylVld~~~GGeLf~hL~~eg--~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~----------------  160 (357)
T KOG0598|consen   99 KLYLVLDYLNGGELFYHLQREG--RFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDE----------------  160 (357)
T ss_pred             eEEEEEeccCCccHHHHHHhcC--CcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecC----------------
Confidence            999999999 999999999876  8999999999999999999999999999999999999954                


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCC---CCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                                 +++++|+|||+++....   ...++|||+.|||||++.+.+|+.++||||||+++|||++|.+||.+.+
T Consensus       161 -----------~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~  229 (357)
T KOG0598|consen  161 -----------QGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED  229 (357)
T ss_pred             -----------CCcEEEeccccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc
Confidence                       45566666666653222   2355799999999999999999999999999999999999999999888


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      .......|...-..                       .                         .+..++.++++||+++|
T Consensus       230 ~~~~~~~I~~~k~~-----------------------~-------------------------~p~~ls~~ardll~~LL  261 (357)
T KOG0598|consen  230 VKKMYDKILKGKLP-----------------------L-------------------------PPGYLSEEARDLLKKLL  261 (357)
T ss_pred             HHHHHHHHhcCcCC-----------------------C-------------------------CCccCCHHHHHHHHHHh
Confidence            77666554332111                       1                         11247789999999999


Q ss_pred             ccCCCCCC----CHHHHhcCCCCCCCC
Q 013973          408 RYDPTDRL----TAREALRHPFFTRDH  430 (433)
Q Consensus       408 ~~dP~~R~----ta~ell~hp~f~~~~  430 (433)
                      ++||++|+    ++.++.+||||....
T Consensus       262 ~rdp~~RLg~~~d~~~ik~HpfF~~in  288 (357)
T KOG0598|consen  262 KRDPRQRLGGPGDAEEIKRHPFFKGIN  288 (357)
T ss_pred             ccCHHHhcCCCCChHHhhcCcccccCC
Confidence            99999997    689999999998753

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.4e-57  Score=439.20  Aligned_cols=250  Identities=32%  Similarity=0.523  Sum_probs=225.1

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeec----chhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      .+|+..+.||+|||+.||++++..+|+.||+|++.+    ....++....|+++.+.+     .|+|||+++++|++.++
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L-----~HpnIV~f~~~FEDs~n   92 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSL-----KHPNIVQFYHFFEDSNN   92 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhc-----CCCcEEeeeeEeecCCc
Confidence            469999999999999999999999999999999975    345677888999999988     77999999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +|||+|+| .++|..+++..  +.++|.+++.++.||+.||.|||+++|||||||..|+|+                   
T Consensus        93 VYivLELC~~~sL~el~Krr--k~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL-------------------  151 (592)
T KOG0575|consen   93 VYIVLELCHRGSLMELLKRR--KPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFL-------------------  151 (592)
T ss_pred             eEEEEEecCCccHHHHHHhc--CCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheee-------------------
Confidence            99999999 99999999854  489999999999999999999999999999999999999                   


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCC---CCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                              +++.++||+|||+|+....   ...+.||||.|+|||++....++..+||||+||+||.||+|++||+..+.
T Consensus       152 --------~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~v  223 (592)
T KOG0575|consen  152 --------NENMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTV  223 (592)
T ss_pred             --------cCcCcEEecccceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchH
Confidence                    6778899999999987763   34678999999999999999999999999999999999999999999888


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      .+.+..|...-...                                                 |..++.++++||.+||+
T Consensus       224 kety~~Ik~~~Y~~-------------------------------------------------P~~ls~~A~dLI~~lL~  254 (592)
T KOG0575|consen  224 KETYNKIKLNEYSM-------------------------------------------------PSHLSAEAKDLIRKLLR  254 (592)
T ss_pred             HHHHHHHHhcCccc-------------------------------------------------ccccCHHHHHHHHHHhc
Confidence            88877765433322                                                 23678899999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCC
Q 013973          409 YDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       409 ~dP~~R~ta~ell~hp~f~~~  429 (433)
                      .||.+|||+++||.|+||+..
T Consensus       255 ~~P~~Rpsl~~vL~h~Ff~~g  275 (592)
T KOG0575|consen  255 PNPSERPSLDEVLDHPFFKSG  275 (592)
T ss_pred             CCcccCCCHHHHhcCHhhhCC
Confidence            999999999999999999654

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=6.4e-57  Score=415.56  Aligned_cols=256  Identities=26%  Similarity=0.442  Sum_probs=216.7

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEee--cchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC-e
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN-H  172 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~--~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~-~  172 (433)
                      .++.+.++.||+|+.|+||+|+++.|++.+|+|++.  .....+++..+|+++++.+     .+|+||.+++.|..++ .
T Consensus        78 ~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~-----~spyIV~~ygaF~~~~~~  152 (364)
T KOG0581|consen   78 LSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSC-----QSPYIVGFYGAFYSNGEE  152 (364)
T ss_pred             HHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhC-----CCCCeeeEeEEEEeCCce
Confidence            356888999999999999999999999999999994  3455677889999999888     7799999999999999 5


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      ++|+|||| +|+|.+++...+  ++++.....++.+|++||.|||+ ++||||||||+|||+++.               
T Consensus       153 isI~mEYMDgGSLd~~~k~~g--~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNsk---------------  215 (364)
T KOG0581|consen  153 ISICMEYMDGGSLDDILKRVG--RIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSK---------------  215 (364)
T ss_pred             EEeehhhcCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccC---------------
Confidence            99999999 999999998764  79999999999999999999995 999999999999999654               


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccC-CCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC--C
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYER-PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH--E  327 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~--~  327 (433)
                                  +.+||||||.+.... ....+++||..|||||.+.+..|+.++||||||++++|+++|++||...  .
T Consensus       216 ------------GeVKicDFGVS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~  283 (364)
T KOG0581|consen  216 ------------GEVKICDFGVSGILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPP  283 (364)
T ss_pred             ------------CCEEeccccccHHhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCC
Confidence                        456777777665332 3346679999999999999999999999999999999999999999764  2


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcC-CchhHHHHHHHhc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD-HSAGDLTHLLQGL  406 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~  406 (433)
                      ....+..+..++...|+.                                             .+. .+|+++++||..|
T Consensus       284 ~~~~~~Ll~~Iv~~ppP~---------------------------------------------lP~~~fS~ef~~FV~~C  318 (364)
T KOG0581|consen  284 YLDIFELLCAIVDEPPPR---------------------------------------------LPEGEFSPEFRSFVSCC  318 (364)
T ss_pred             CCCHHHHHHHHhcCCCCC---------------------------------------------CCcccCCHHHHHHHHHH
Confidence            334455554444332221                                             122 4889999999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      |++||.+|+|+.|+++|||+++..
T Consensus       319 L~Kdp~~R~s~~qLl~Hpfi~~~~  342 (364)
T KOG0581|consen  319 LRKDPSERPSAKQLLQHPFIKKFE  342 (364)
T ss_pred             hcCCcccCCCHHHHhcCHHHhhcc
Confidence            999999999999999999998643

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-56  Score=398.30  Aligned_cols=251  Identities=26%  Similarity=0.446  Sum_probs=223.8

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .++|++++.||.|+||.|.+++.+.+|..||+|++++.+    +..+....|..+|+.+     .||+++.+.+.|.+.+
T Consensus        43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v-----~~PFlv~l~~t~~d~~  117 (355)
T KOG0616|consen   43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAV-----SHPFLVKLYGTFKDNS  117 (355)
T ss_pred             hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhc-----cCceeEEEEEeeccCC
Confidence            367999999999999999999999999999999997543    2334456788899888     6799999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      ++||||||+ ||.|+.+|++.+  +|++..+++|+.||+.||+|||+++|++|||||+||||                  
T Consensus       118 ~lymvmeyv~GGElFS~Lrk~~--rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLl------------------  177 (355)
T KOG0616|consen  118 NLYMVMEYVPGGELFSYLRKSG--RFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLL------------------  177 (355)
T ss_pred             eEEEEEeccCCccHHHHHHhcC--CCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeee------------------
Confidence            999999999 999999999876  89999999999999999999999999999999999999                  


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                               |.++.+||+|||+|........+.||||.|+|||++...+|+.++|||||||++|||+.|.+||.+.+...
T Consensus       178 ---------D~~G~iKitDFGFAK~v~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~  248 (355)
T KOG0616|consen  178 ---------DQNGHIKITDFGFAKRVSGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQ  248 (355)
T ss_pred             ---------ccCCcEEEEeccceEEecCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHH
Confidence                     56667888999999888777778899999999999999999999999999999999999999999988877


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ++..|..                       |.+.                          +|..++++++|||.++|++|
T Consensus       249 iY~KI~~-----------------------~~v~--------------------------fP~~fs~~~kdLl~~LL~vD  279 (355)
T KOG0616|consen  249 IYEKILE-----------------------GKVK--------------------------FPSYFSSDAKDLLKKLLQVD  279 (355)
T ss_pred             HHHHHHh-----------------------Cccc--------------------------CCcccCHHHHHHHHHHHhhh
Confidence            7766433                       3333                          34478889999999999999


Q ss_pred             CCCCC-----CHHHHhcCCCCCCC
Q 013973          411 PTDRL-----TAREALRHPFFTRD  429 (433)
Q Consensus       411 P~~R~-----ta~ell~hp~f~~~  429 (433)
                      -.+|.     ...++..||||+.-
T Consensus       280 ~t~R~gnlknG~~dIk~H~wF~~v  303 (355)
T KOG0616|consen  280 LTKRFGNLKNGVEDIKNHPWFKGV  303 (355)
T ss_pred             hHhhhcCcCCCccccccCcccccc
Confidence            99995     57899999999864

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=6.5e-56  Score=424.50  Aligned_cols=269  Identities=26%  Similarity=0.414  Sum_probs=225.9

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      ..+|.+.+.||+|+|++|++|+++.+++.||||++.+.-    +..+-...|.++|.+|.    +||.|++++..|++..
T Consensus        72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~----~hPgivkLy~TFQD~~  147 (604)
T KOG0592|consen   72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLS----GHPGIVKLYFTFQDEE  147 (604)
T ss_pred             hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhh----CCCCeEEEEEEeeccc
Confidence            467999999999999999999999999999999986421    11233557888888884    6788999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+|+|+||+ +|+|.++|.+.+  .|++..++.|+.||+.||+|||++|||||||||+|||++.+++++|+|||-+...+
T Consensus       148 sLYFvLe~A~nGdll~~i~K~G--sfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~  225 (604)
T KOG0592|consen  148 SLYFVLEYAPNGDLLDLIKKYG--SFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILS  225 (604)
T ss_pred             ceEEEEEecCCCcHHHHHHHhC--cchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCC
Confidence            999999999 999999999886  89999999999999999999999999999999999999888888888888766554


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                      ......    +       .+-.......+...++||..|.+||++.....++.+|+|+|||++|.|+.|.+||.+.++.-
T Consensus       226 ~~~~~~----~-------~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyl  294 (604)
T KOG0592|consen  226 PSQKSQ----E-------NPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYL  294 (604)
T ss_pred             hhhccc----c-------CccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHH
Confidence            322110    0       00000011111255799999999999999999999999999999999999999999999888


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ++..|..+...+|                                                 ..+++.+.|||.++|.+|
T Consensus       295 iFqkI~~l~y~fp-------------------------------------------------~~fp~~a~dLv~KLLv~d  325 (604)
T KOG0592|consen  295 IFQKIQALDYEFP-------------------------------------------------EGFPEDARDLIKKLLVRD  325 (604)
T ss_pred             HHHHHHHhcccCC-------------------------------------------------CCCCHHHHHHHHHHHccC
Confidence            8888776655443                                                 467789999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCCC
Q 013973          411 PTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       411 P~~R~ta~ell~hp~f~~~~  430 (433)
                      |.+|+|+.||.+||||..-.
T Consensus       326 p~~Rlt~~qIk~HpFF~~Vd  345 (604)
T KOG0592|consen  326 PSDRLTSQQIKAHPFFEGVD  345 (604)
T ss_pred             ccccccHHHHhhCcccccCC
Confidence            99999999999999998643

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=6.7e-56  Score=424.66  Aligned_cols=281  Identities=27%  Similarity=0.453  Sum_probs=226.0

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHH----HHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYRE----AAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~----~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .++|++++.||+|+||.||+|+.+.||+.||+|++++......    -...|..+|...     .++.||+++..|++..
T Consensus       140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~-----ds~~vVKLyYsFQD~~  214 (550)
T KOG0605|consen  140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEV-----DSPWVVKLYYSFQDKE  214 (550)
T ss_pred             cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhc-----CCCcEEEEEEEecCCC
Confidence            4689999999999999999999999999999999987654333    334566666553     7799999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      ++||||||+ ||++..+|...+  .|++..+++|+.+++.|++-||+.|+|||||||+|+||+..||+||+|||++....
T Consensus       215 ~LYLiMEylPGGD~mTLL~~~~--~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~  292 (550)
T KOG0605|consen  215 YLYLIMEYLPGGDMMTLLMRKD--TLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD  292 (550)
T ss_pred             eeEEEEEecCCccHHHHHHhcC--cCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhh
Confidence            999999999 999999998876  89999999999999999999999999999999999999999999999999996554


Q ss_pred             CCCcccc-c----CC-CCCCEEEEecCCc--cccC-CC--------------CCceeecCcccchhhhhCCCCCCcchhH
Q 013973          251 KDSSYFK-R----MP-KSSAIKVIDFGST--TYER-PD--------------QNYIVSTRHYRAPEVILGLGWTYPCDIW  307 (433)
Q Consensus       251 ~~~~~~~-~----~~-~~~~~kl~Dfg~a--~~~~-~~--------------~~~~~gt~~y~aPE~~~~~~~~~~~Dvw  307 (433)
                      ....... +    ++ .....+-.||...  .... ..              ....+|||.|||||++.+.+|+..+|||
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW  372 (550)
T KOG0605|consen  293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW  372 (550)
T ss_pred             hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence            3322110 0    00 1112233444421  0000 00              0235899999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHH
Q 013973          308 SVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL  387 (433)
Q Consensus       308 SlGv~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (433)
                      |||||+||||.|.+||.+.+..+++..|...-..                     +.+|.                    
T Consensus       373 SLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~---------------------l~fP~--------------------  411 (550)
T KOG0605|consen  373 SLGCIMYEMLVGYPPFCSETPQETYRKIVNWRET---------------------LKFPE--------------------  411 (550)
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhh---------------------ccCCC--------------------
Confidence            9999999999999999999988888776543211                     12222                    


Q ss_pred             HhhhcCCchhHHHHHHHhccccCCCCCCC---HHHHhcCCCCCCC
Q 013973          388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLT---AREALRHPFFTRD  429 (433)
Q Consensus       388 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t---a~ell~hp~f~~~  429 (433)
                          ...++.++.|||.+||. ||++|+.   ++||.+||||+.-
T Consensus       412 ----~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v  451 (550)
T KOG0605|consen  412 ----EVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGV  451 (550)
T ss_pred             ----cCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccC
Confidence                12456799999999999 9999995   8999999999865

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=2.1e-55  Score=393.53  Aligned_cols=279  Identities=32%  Similarity=0.590  Sum_probs=233.6

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      ++|+.+.++|+|+||+||+|++++||+.||||.+...   ....+-+++|+..|+++     .|+|+|.+++.|.-...+
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqL-----kH~NLVnLiEVFrrkrkl   76 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQL-----KHENLVNLIEVFRRKRKL   76 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhc-----ccchHHHHHHHHHhccee
Confidence            4588899999999999999999999999999998633   23456678999999999     778999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       174 ~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +||||||..++.+-|+... ..++.+.+..|+.|++.|+.|+|+++||||||||+||||                     
T Consensus        77 hLVFE~~dhTvL~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILi---------------------  134 (396)
T KOG0593|consen   77 HLVFEYCDHTVLHELERYP-NGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILI---------------------  134 (396)
T ss_pred             EEEeeecchHHHHHHHhcc-CCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEE---------------------
Confidence            9999999888888888765 369999999999999999999999999999999999999                     


Q ss_pred             cccccCCCCCCEEEEecCCccccC-CCCC--ceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCChH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYER-PDQN--YIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENL  329 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~-~~~~--~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~  329 (433)
                            ..++.+||||||+|+... ++..  .++.|.+|.|||.+.+ .+|++.+||||+||++.||++|.+.|.+.++.
T Consensus       135 ------t~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDi  208 (396)
T KOG0593|consen  135 ------TQNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDI  208 (396)
T ss_pred             ------ecCCcEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchH
Confidence                  456788999999998766 3332  2588999999999998 68999999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccC-cccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG-RLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      +++..|...+|.+++....-...+.   +..| .+.-|+..               . ......+..+.-+.||+.+||+
T Consensus       209 DQLy~I~ktLG~L~prhq~iF~~N~---~F~Gv~lP~~~~~---------------e-pLe~k~p~~s~~~ld~~k~cL~  269 (396)
T KOG0593|consen  209 DQLYLIRKTLGNLIPRHQSIFSSNP---FFHGVRLPEPEHP---------------E-PLERKYPKISNVLLDLLKKCLK  269 (396)
T ss_pred             HHHHHHHHHHcccCHHHHHHhccCC---ceeeeecCCCCCc---------------c-chhhhcccchHHHHHHHHHHhc
Confidence            9999999999999987654332211   1111 11112111               1 1122334566789999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCC
Q 013973          409 YDPTDRLTAREALRHPFFT  427 (433)
Q Consensus       409 ~dP~~R~ta~ell~hp~f~  427 (433)
                      .||.+|++.+|+|.||||.
T Consensus       270 ~dP~~R~sc~qll~H~yFd  288 (396)
T KOG0593|consen  270 MDPDDRLSCEQLLHHPYFD  288 (396)
T ss_pred             CCccccccHHHHhcChHHH
Confidence            9999999999999999994

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-55  Score=413.34  Aligned_cols=284  Identities=31%  Similarity=0.524  Sum_probs=235.6

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHH--HHHHHHHHHHHHhcCCCCCceEEecceeecCC-
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA--AMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN-  171 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~--~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~-  171 (433)
                      +-++|.++++||.|+||.||+|+.+.+++.||||.+++.-...++  -.+|+..|+++    +.|+||+++.+.+.+.+ 
T Consensus         8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kl----n~hpniikL~Evi~d~~~   83 (538)
T KOG0661|consen    8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKL----NPHPNIIKLKEVIRDNDR   83 (538)
T ss_pred             HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhc----CCCCcchhhHHHhhccCc
Confidence            346899999999999999999999999999999998743221222  35788888888    23899999999998887 


Q ss_pred             eEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          172 HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       172 ~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      .+|+|||||..+|+++++.+ ++.|++..++.|+.||++||+|+|++|+.||||||+|||+.                  
T Consensus        84 ~L~fVfE~Md~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~------------------  144 (538)
T KOG0661|consen   84 ILYFVFEFMDCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILIS------------------  144 (538)
T ss_pred             eEeeeHHhhhhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEec------------------
Confidence            99999999999999999988 57899999999999999999999999999999999999993                  


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                               ....+||+|||+|+......  +.++.|.+|+|||+++. .-|+.+.||||+|||++|+.+-++.|.+.++
T Consensus       145 ---------~~~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE  215 (538)
T KOG0661|consen  145 ---------GNDVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASE  215 (538)
T ss_pred             ---------ccceeEecccccccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcH
Confidence                     35678999999998665444  34689999999999985 4589999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      .+++..|..++|.+....+......+.    .-.+.+|.-..           ..    +....+..+.++.+||.+||.
T Consensus       216 ~Dqi~KIc~VLGtP~~~~~~eg~~La~----~mnf~~P~~~~-----------~~----l~~L~p~~s~~~~~li~~ll~  276 (538)
T KOG0661|consen  216 IDQIYKICEVLGTPDKDSWPEGYNLAS----AMNFRFPQVKP-----------SP----LKDLLPNASSEAASLIERLLA  276 (538)
T ss_pred             HHHHHHHHHHhCCCccccchhHHHHHH----HhccCCCcCCC-----------CC----hHHhCcccCHHHHHHHHHHhc
Confidence            999999999999988776655422222    22233332111           11    122234578899999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCC
Q 013973          409 YDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       409 ~dP~~R~ta~ell~hp~f~~~  429 (433)
                      +||.+||||.|+|+||||+..
T Consensus       277 WDP~kRpTA~~al~~pffq~~  297 (538)
T KOG0661|consen  277 WDPDKRPTASQALQHPFFQVG  297 (538)
T ss_pred             CCCccCccHHHHhcCcccccc
Confidence            999999999999999999854

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=4.4e-54  Score=400.16  Aligned_cols=282  Identities=27%  Similarity=0.383  Sum_probs=231.5

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .+.|++++.||.|.-|+||+|+.+.++..+|+|++.+..    +...++..|.+||+.+     +||.++.+|..|+...
T Consensus        76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~l-----DHPFlPTLYa~fet~~  150 (459)
T KOG0610|consen   76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLL-----DHPFLPTLYASFETDK  150 (459)
T ss_pred             HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhc-----CCCccchhhheeeccc
Confidence            467999999999999999999999999999999997532    2334566789999988     8899999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      ..|+||||| ||+|...++++..+.|++..+++|+.+|+.||+|||-+|||+|||||+||||.++||+.++||-++...+
T Consensus       151 ~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~  230 (459)
T KOG0610|consen  151 YSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCP  230 (459)
T ss_pred             eeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCC
Confidence            999999999 9999999999988999999999999999999999999999999999999999999999999999987665


Q ss_pred             CCCcccccCC-----CCCCE---EEEecCCc------------------------cccCCCCCceeecCcccchhhhhCC
Q 013973          251 KDSSYFKRMP-----KSSAI---KVIDFGST------------------------TYERPDQNYIVSTRHYRAPEVILGL  298 (433)
Q Consensus       251 ~~~~~~~~~~-----~~~~~---kl~Dfg~a------------------------~~~~~~~~~~~gt~~y~aPE~~~~~  298 (433)
                      ..++......     .....   .+.-|...                        ...+.....++||-.|+|||++.++
T Consensus       231 ~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~  310 (459)
T KOG0610|consen  231 VSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGE  310 (459)
T ss_pred             CCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecC
Confidence            5433322110     00000   01111111                        1111122457999999999999999


Q ss_pred             CCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhh
Q 013973          299 GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSV  378 (433)
Q Consensus       299 ~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  378 (433)
                      ..+.++|||+|||++|||+.|..||++.+..+++..|...--.+                       |+           
T Consensus       311 GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~F-----------------------p~-----------  356 (459)
T KOG0610|consen  311 GHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKF-----------------------PE-----------  356 (459)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcC-----------------------CC-----------
Confidence            99999999999999999999999999999988887654332222                       22           


Q ss_pred             ccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCC----HHHHhcCCCCCCC
Q 013973          379 MKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT----AREALRHPFFTRD  429 (433)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----a~ell~hp~f~~~  429 (433)
                                   ....+..++|||+++|.+||.+|+.    |+||.+||||+.-
T Consensus       357 -------------~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gV  398 (459)
T KOG0610|consen  357 -------------EPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGV  398 (459)
T ss_pred             -------------CCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCC
Confidence                         1245678999999999999999998    9999999999864

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.2e-54  Score=408.90  Aligned_cols=286  Identities=28%  Similarity=0.467  Sum_probs=237.3

Q ss_pred             ceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           93 ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        93 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      ....+.|+.+++||+|+||.||+|++..+|+.||+|.++...   ....-..+||.||+++     +|+||+++.+....
T Consensus       113 ~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l-----~HpNIikL~eivt~  187 (560)
T KOG0600|consen  113 PRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRL-----DHPNIIKLEEIVTS  187 (560)
T ss_pred             ccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhc-----CCCcccceeeEEEe
Confidence            334567999999999999999999999999999999997432   2344567899999999     88999999999876


Q ss_pred             C--CeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC
Q 013973          170 R--NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       170 ~--~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                      .  +.+|||||||..+|..++...+ -.|++.++..|+.||+.||+|||.+||+|||||.+||||               
T Consensus       188 ~~~~siYlVFeYMdhDL~GLl~~p~-vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLi---------------  251 (560)
T KOG0600|consen  188 KLSGSIYLVFEYMDHDLSGLLSSPG-VKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILI---------------  251 (560)
T ss_pred             cCCceEEEEEecccchhhhhhcCCC-cccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEE---------------
Confidence            6  7999999999999999988654 479999999999999999999999999999999999999               


Q ss_pred             CCCCCCcccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCC
Q 013973          248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEAL  322 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P  322 (433)
                                  |.++.+||+|||+|++.....    +..+-|.+|.|||+++|. .|+.++|+||.||||.||++|++.
T Consensus       252 ------------dn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI  319 (560)
T KOG0600|consen  252 ------------DNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPI  319 (560)
T ss_pred             ------------cCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCC
Confidence                        556678888888887655443    234679999999999986 599999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       323 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      |++.++.+++..|.+++|.+.+..|+ +...          .+......         ...+...+.+....++..+.+|
T Consensus       320 ~~G~tEveQl~kIfklcGSP~e~~W~-~~kL----------P~~~~~kp---------~~~y~r~l~E~~~~~~~~~l~L  379 (560)
T KOG0600|consen  320 LQGRTEVEQLHKIFKLCGSPTEDYWP-VSKL----------PHATIFKP---------QQPYKRRLRETFKDFPASALDL  379 (560)
T ss_pred             cCCccHHHHHHHHHHHhCCCChhccc-cccC----------CcccccCC---------CCcccchHHHHhccCCHHHHHH
Confidence            99999999999999999999988766 2111          11111111         1111223333456788899999


Q ss_pred             HHhccccCCCCCCCHHHHhcCCCCCCCCC
Q 013973          403 LQGLLRYDPTDRLTAREALRHPFFTRDHL  431 (433)
Q Consensus       403 i~~~L~~dP~~R~ta~ell~hp~f~~~~~  431 (433)
                      +..||..||.+|.||.++|+|+||+..++
T Consensus       380 l~~lL~ldP~kR~tA~~aL~seyF~t~p~  408 (560)
T KOG0600|consen  380 LEKLLSLDPDKRGTASSALQSEYFTTEPL  408 (560)
T ss_pred             HHHHhccCccccccHHHHhcCcccccCCC
Confidence            99999999999999999999999965543

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-53  Score=396.34  Aligned_cols=262  Identities=29%  Similarity=0.511  Sum_probs=223.4

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeec---chhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      .++|.+.+.||+|+||+||+|+++.++..||||.+.+   .++..+....|+.+|+.+     .|+|||.+++++++.++
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel-----~H~nIV~l~d~~~~~~~   83 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKEL-----KHPNIVRLLDCIEDDDF   83 (429)
T ss_pred             cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhc-----CCcceeeEEEEEecCCe
Confidence            4679999999999999999999999999999999864   345667778999999999     68999999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +||||||| ||+|.+||+..+  .+++..++.++.||+.||++||+++||||||||.||||+....              
T Consensus        84 i~lVMEyC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~--------------  147 (429)
T KOG0595|consen   84 IYLVMEYCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTAR--------------  147 (429)
T ss_pred             EEEEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCC--------------
Confidence            99999999 999999999876  8999999999999999999999999999999999999964310              


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChH
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  329 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~  329 (433)
                             .+....+||+|||+|+...+..  .+.||++.|||||++....|+.|+|+||+|+++|++++|..||...+..
T Consensus       148 -------~~~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~  220 (429)
T KOG0595|consen  148 -------NDTSPVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPK  220 (429)
T ss_pred             -------CCCCceEEecccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHH
Confidence                   0122679999999999877654  5679999999999999999999999999999999999999999988877


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +.+..+.                       ++....|.                       .+...+....+|+..+|++
T Consensus       221 eL~~~~~-----------------------k~~~~~~~-----------------------~~~~~s~~~~~Ll~~ll~~  254 (429)
T KOG0595|consen  221 ELLLYIK-----------------------KGNEIVPV-----------------------LPAELSNPLRELLISLLQR  254 (429)
T ss_pred             HHHHHHh-----------------------ccccccCc-----------------------hhhhccCchhhhhhHHHhc
Confidence            7665332                       22211111                       1234455677899999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCCC
Q 013973          410 DPTDRLTAREALRHPFFTRDHL  431 (433)
Q Consensus       410 dP~~R~ta~ell~hp~f~~~~~  431 (433)
                      ||..|.+..+-+.|+++.....
T Consensus       255 ~~~~~~~~~~~~~~~~l~~~p~  276 (429)
T KOG0595|consen  255 NPKDRISFEDFFDHPFLAANPQ  276 (429)
T ss_pred             CccccCchHHhhhhhhcccCcc
Confidence            9999999999999999876643

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=1.4e-53  Score=375.78  Aligned_cols=281  Identities=29%  Similarity=0.503  Sum_probs=235.0

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      .+|..++.||+|.||+||+|++..||+.||||.++..+   .......+|+..|+.+     +|+||+.+++.|...+.+
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel-----~h~nIi~LiD~F~~~~~l   76 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQEL-----KHPNIIELIDVFPHKSNL   76 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHc-----cCcchhhhhhhccCCCce
Confidence            46888999999999999999999999999999997432   2345678899999999     679999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       174 ~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      .||+||+..+|...++... ..|+...+..|+.++++||+|||++.|+||||||.|+||++                   
T Consensus        77 ~lVfEfm~tdLe~vIkd~~-i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~-------------------  136 (318)
T KOG0659|consen   77 SLVFEFMPTDLEVVIKDKN-IILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISS-------------------  136 (318)
T ss_pred             EEEEEeccccHHHHhcccc-cccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcC-------------------
Confidence            9999999999999998765 57999999999999999999999999999999999999955                   


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCChH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENL  329 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~  329 (433)
                              ++.+||+|||+|+...+..   ...+-|.+|.|||.+.|. .|+..+||||.||++.||+.|.+-|.+.++.
T Consensus       137 --------~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDi  208 (318)
T KOG0659|consen  137 --------DGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDI  208 (318)
T ss_pred             --------CCcEEeecccchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchH
Confidence                    4567777777777655433   223789999999999875 5999999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +++..|.+.+|.+.++.|+.+.....+...+ .+..                +...+    .....+.++.||+.+||..
T Consensus       209 dQL~~If~~LGTP~~~~WP~~~~lpdY~~~~-~~P~----------------~~~~~----lf~aas~d~ldLl~~m~~y  267 (318)
T KOG0659|consen  209 DQLSKIFRALGTPTPDQWPEMTSLPDYVKIQ-QFPK----------------PPLNN----LFPAASSDALDLLSKMLTY  267 (318)
T ss_pred             HHHHHHHHHcCCCCcccCccccccccHHHHh-cCCC----------------Ccccc----ccccccHHHHHHHHhhhcc
Confidence            9999999999998887766654433322111 1111                11111    3345677889999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCCC
Q 013973          410 DPTDRLTAREALRHPFFTRDHL  431 (433)
Q Consensus       410 dP~~R~ta~ell~hp~f~~~~~  431 (433)
                      ||.+|+||.|+|+|+||+..+.
T Consensus       268 nP~~Rita~qaL~~~yf~~~P~  289 (318)
T KOG0659|consen  268 NPKKRITASQALKHPYFKSLPL  289 (318)
T ss_pred             CchhcccHHHHhcchhhhcCCC
Confidence            9999999999999999997653

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6e-53  Score=414.83  Aligned_cols=251  Identities=25%  Similarity=0.396  Sum_probs=214.1

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .++|.++++||+|+||+|++|..+.+++.||||++++.    +...+..+.|..|+..+.    .||.++.++..|++..
T Consensus       367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~----~HPFL~~L~~~fQT~~  442 (694)
T KOG0694|consen  367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELAN----RHPFLVNLFSCFQTKE  442 (694)
T ss_pred             ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhc----cCCeEeecccccccCC
Confidence            46899999999999999999999999999999999864    345677788888887773    6899999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      ++|+||||+ ||++..+.+   .+.|++..++.|+++|+.||.|||++||||||||.+|||++.+|+             
T Consensus       443 ~l~fvmey~~Ggdm~~~~~---~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh-------------  506 (694)
T KOG0694|consen  443 HLFFVMEYVAGGDLMHHIH---TDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGH-------------  506 (694)
T ss_pred             eEEEEEEecCCCcEEEEEe---cccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCc-------------
Confidence            999999999 888433332   247999999999999999999999999999999999999955555             


Q ss_pred             CCCcccccCCCCCCEEEEecCCccc---cCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTY---ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                                    +||+|||+++.   .+...+++||||.|||||++.+..|+.++|||||||+|||||+|.+||.+++
T Consensus       507 --------------~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gdd  572 (694)
T KOG0694|consen  507 --------------VKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDD  572 (694)
T ss_pred             --------------EEecccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence                          55555555542   2234467899999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      +.+.+..|...-.                                                 .+|..++.++.++++++|
T Consensus       573 Eee~FdsI~~d~~-------------------------------------------------~yP~~ls~ea~~il~~ll  603 (694)
T KOG0694|consen  573 EEEVFDSIVNDEV-------------------------------------------------RYPRFLSKEAIAIMRRLL  603 (694)
T ss_pred             HHHHHHHHhcCCC-------------------------------------------------CCCCcccHHHHHHHHHHh
Confidence            9988876543211                                                 134577889999999999


Q ss_pred             ccCCCCCCC-----HHHHhcCCCCCCC
Q 013973          408 RYDPTDRLT-----AREALRHPFFTRD  429 (433)
Q Consensus       408 ~~dP~~R~t-----a~ell~hp~f~~~  429 (433)
                      .+||++|+.     +.+|..||||+..
T Consensus       604 ~k~p~kRLG~~e~d~~~i~~hpFFr~i  630 (694)
T KOG0694|consen  604 RKNPEKRLGSGERDAEDIKKHPFFRSI  630 (694)
T ss_pred             ccCcccccCCCCCCchhhhhCCccccC
Confidence            999999995     6899999999865

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-52  Score=404.39  Aligned_cols=252  Identities=31%  Similarity=0.527  Sum_probs=216.5

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc----h--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----K--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      ..++|.+.+.||+|+||+|++|.+..+++.||+|+++..    .  ...+...+|+.+++.+.    +||||+++++++.
T Consensus        15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~----~HpnI~~l~ev~~   90 (370)
T KOG0583|consen   15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLR----SHPNIIRLLEVFA   90 (370)
T ss_pred             ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhc----cCCCEeEEEEEEe
Confidence            356799999999999999999999999999999987642    1  23445567999999883    2678999999999


Q ss_pred             cCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC
Q 013973          169 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       169 ~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                      ....+|+||||+ ||+|++++...+  ++.+.+++.++.|+++|++|||++||+||||||+|||+               
T Consensus        91 t~~~~~ivmEy~~gGdL~~~i~~~g--~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENill---------------  153 (370)
T KOG0583|consen   91 TPTKIYIVMEYCSGGDLFDYIVNKG--RLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILL---------------  153 (370)
T ss_pred             cCCeEEEEEEecCCccHHHHHHHcC--CCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEe---------------
Confidence            999999999999 899999999844  89999999999999999999999999999999999999               


Q ss_pred             CCCCCCcccccCCCC-CCEEEEecCCccccC-C--CCCceeecCcccchhhhhCCC-CC-CcchhHHHHHHHHHHHhCCC
Q 013973          248 HTPKDSSYFKRMPKS-SAIKVIDFGSTTYER-P--DQNYIVSTRHYRAPEVILGLG-WT-YPCDIWSVGCILVELCTGEA  321 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~-~~~kl~Dfg~a~~~~-~--~~~~~~gt~~y~aPE~~~~~~-~~-~~~DvwSlGv~l~elltg~~  321 (433)
                                  +.+ +++||+|||++.... .  ...+.|||+.|+|||++.+.. |+ .++||||+||+||.|++|+.
T Consensus       154 ------------d~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~  221 (370)
T KOG0583|consen  154 ------------DGNEGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRL  221 (370)
T ss_pred             ------------cCCCCCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCC
Confidence                        445 788999999888662 2  235679999999999999987 86 88999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCc-hhHHH
Q 013973          322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS-AGDLT  400 (433)
Q Consensus       322 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  400 (433)
                      ||...+....+..                       +..+.+..|.                          .+ +.+++
T Consensus       222 PF~d~~~~~l~~k-----------------------i~~~~~~~p~--------------------------~~~S~~~~  252 (370)
T KOG0583|consen  222 PFDDSNVPNLYRK-----------------------IRKGEFKIPS--------------------------YLLSPEAR  252 (370)
T ss_pred             CCCCccHHHHHHH-----------------------HhcCCccCCC--------------------------CcCCHHHH
Confidence            9998665554443                       3344444333                          44 78999


Q ss_pred             HHHHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          401 HLLQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       401 ~li~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      +|+.+||+.||.+|+|+.+++.||||+.
T Consensus       253 ~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  253 SLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             HHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence            9999999999999999999999999997

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.9e-52  Score=408.38  Aligned_cols=249  Identities=30%  Similarity=0.559  Sum_probs=221.0

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      +-|++.+.||.|+.|.|.+|++..||+.+|||++.+.    ......+.+|+.+|+.|     .|||++.+++.++...+
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi-----~HpnVl~LydVwe~~~~   86 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLI-----EHPNVLRLYDVWENKQH   86 (786)
T ss_pred             cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHh-----cCCCeeeeeeeeccCce
Confidence            3489999999999999999999999999999999754    22345678899999999     77999999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +|+|.||+ ||.|+++|...+  +|++.++.+++.||+.|+.|||..+|+||||||+|+|+                   
T Consensus        87 lylvlEyv~gGELFdylv~kG--~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLL-------------------  145 (786)
T KOG0588|consen   87 LYLVLEYVPGGELFDYLVRKG--PLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLL-------------------  145 (786)
T ss_pred             EEEEEEecCCchhHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhh-------------------
Confidence            99999999 999999998876  89999999999999999999999999999999999999                   


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCC-CcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWT-YPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                              +...++||+|||+|....++.  .+.||++.|.|||++.|.+|+ .++||||+|||||.||||++||.+++-
T Consensus       146 --------d~~~nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNi  217 (786)
T KOG0588|consen  146 --------DVKNNIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNI  217 (786)
T ss_pred             --------hcccCEeeeccceeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccH
Confidence                    555569999999998766655  457999999999999999986 899999999999999999999997665


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      ...+.+                       +.+|.+..|.                          .++.++++||++||.
T Consensus       218 r~LLlK-----------------------V~~G~f~MPs--------------------------~Is~eaQdLLr~ml~  248 (786)
T KOG0588|consen  218 RVLLLK-----------------------VQRGVFEMPS--------------------------NISSEAQDLLRRMLD  248 (786)
T ss_pred             HHHHHH-----------------------HHcCcccCCC--------------------------cCCHHHHHHHHHHhc
Confidence            554443                       4556666554                          678899999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCC
Q 013973          409 YDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       409 ~dP~~R~ta~ell~hp~f~~  428 (433)
                      +||++|+|.+||++|||+..
T Consensus       249 VDp~~RiT~~eI~kHP~l~g  268 (786)
T KOG0588|consen  249 VDPSTRITTEEILKHPFLSG  268 (786)
T ss_pred             cCccccccHHHHhhCchhhc
Confidence            99999999999999999974

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=3.9e-52  Score=377.07  Aligned_cols=284  Identities=27%  Similarity=0.462  Sum_probs=231.3

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh---hHHHHHHHHHHHHHHHhcCCCCCceEEecceeec--CC
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK---YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY--RN  171 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~--~~  171 (433)
                      +.|+.++.|++|+||.||+|+++.|++.||+|.++-.+.   ..-...+|+.+|.++     +|+|||.+.++...  -+
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~-----~H~NIV~vkEVVvG~~~d  150 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKA-----RHPNIVEVKEVVVGSNMD  150 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhc-----CCCCeeeeEEEEeccccc
Confidence            569999999999999999999999999999999974321   122346899999988     67999999888764  45


Q ss_pred             eEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          172 HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       172 ~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      .+|||||||..+|...+.... .+|...+++.++.|+++||+|||.+.|+|||||++|+|++.                 
T Consensus       151 ~iy~VMe~~EhDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~-----------------  212 (419)
T KOG0663|consen  151 KIYIVMEYVEHDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSH-----------------  212 (419)
T ss_pred             eeeeeHHHHHhhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeecc-----------------
Confidence            799999999999999998775 68999999999999999999999999999999999999954                 


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                                .+.+||+|||+|+..+...   +..+-|.+|.|||++.+. .|++++|+||+|||+.||+++.+.|.+.+
T Consensus       213 ----------~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~s  282 (419)
T KOG0663|consen  213 ----------KGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKS  282 (419)
T ss_pred             ----------CCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCc
Confidence                      4567788888887666552   345779999999999986 49999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCC-chhHHHHHHHhc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH-SAGDLTHLLQGL  406 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~  406 (433)
                      ..+++..|.+.+|.+.+.+|+........-    ...++..           ....++   ..+... ++....+|+..+
T Consensus       283 E~dQl~~If~llGtPte~iwpg~~~lp~~k----~~~f~~~-----------pyn~lr---~kF~~~~lse~g~~Lln~l  344 (419)
T KOG0663|consen  283 EIDQLDKIFKLLGTPSEAIWPGYSELPAVK----KMTFSEH-----------PYNNLR---KKFGALSLSEQGFDLLNKL  344 (419)
T ss_pred             hHHHHHHHHHHhCCCccccCCCccccchhh----ccccCCC-----------Cchhhh---hhccccccchhHHHHHHHH
Confidence            999999999999999887766544332110    0011110           011111   111112 568899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFTRDHL  431 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~~~~~  431 (433)
                      |.+||.+|.||.|.|+|+||.+.++
T Consensus       345 lt~dP~kR~tA~~~L~h~~F~e~P~  369 (419)
T KOG0663|consen  345 LTYDPGKRITAEDGLKHEYFRETPL  369 (419)
T ss_pred             hccCccccccHHHhhcccccccCCC
Confidence            9999999999999999999998543

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-51  Score=378.15  Aligned_cols=282  Identities=29%  Similarity=0.510  Sum_probs=235.6

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEee---cchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec-
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY-  169 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~---~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~-  169 (433)
                      .+...|..++.||+|+||.|..|.++.+|+.||||.+.   ......++..+|+.+|+.+     .|+||+.+.+.+.. 
T Consensus        19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~-----~HeNIi~l~di~~p~   93 (359)
T KOG0660|consen   19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHL-----RHENIIGLLDIFRPP   93 (359)
T ss_pred             eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHh-----cCCCcceEEeecccc
Confidence            34566888899999999999999999999999999885   2344567778899999998     56889999988865 


Q ss_pred             ----CCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcC
Q 013973          170 ----RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  245 (433)
Q Consensus       170 ----~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~  245 (433)
                          -+.+|+|+|+|+.+|...++++.  .|+.+.++.+++||++||+|+|+.+|+||||||+|+|++            
T Consensus        94 ~~~~f~DvYiV~elMetDL~~iik~~~--~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n------------  159 (359)
T KOG0660|consen   94 SRDKFNDVYLVFELMETDLHQIIKSQQ--DLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLN------------  159 (359)
T ss_pred             cccccceeEEehhHHhhHHHHHHHcCc--cccHHHHHHHHHHHHHhcchhhcccccccccchhheeec------------
Confidence                46799999999999999998764  699999999999999999999999999999999999995            


Q ss_pred             CCCCCCCCcccccCCCCCCEEEEecCCccccCC----CC-CceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhC
Q 013973          246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP----DQ-NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTG  319 (433)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~----~~-~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg  319 (433)
                                     .+..+||||||+|+....    +. +..+-|.+|.|||++.. ..|+.++||||.|||+.||++|
T Consensus       160 ---------------~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~g  224 (359)
T KOG0660|consen  160 ---------------ADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTG  224 (359)
T ss_pred             ---------------cCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcC
Confidence                           455667777777776532    21 34678999999999875 5799999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCCHHHHHHHh-hhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhH
Q 013973          320 EALFQTHENLEHLAMMERVLGPLPQHMLKRVD-RHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  398 (433)
Q Consensus       320 ~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (433)
                      ++.|.+.+..+++..|...+|.++++.+..+. +.+..|+.+-.. .|..                  ......+..++.
T Consensus       225 kplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~-~p~~------------------~f~~~fp~a~p~  285 (359)
T KOG0660|consen  225 KPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQ-IPKQ------------------PFSSIFPNANPL  285 (359)
T ss_pred             CCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCC-CCCC------------------CHHHHcCCCCHH
Confidence            99999999999999999999999999888876 445556654211 1110                  011223477889


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          399 LTHLLQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       399 ~~~li~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      +.||+.+||..||.+|+|++|+|+||||+.
T Consensus       286 AidLlekmL~fdP~kRita~eAL~hPYl~~  315 (359)
T KOG0660|consen  286 AIDLLEKMLVFDPKKRITAEEALAHPYLAP  315 (359)
T ss_pred             HHHHHHHHhccCccccCCHHHHhcChhhhh
Confidence            999999999999999999999999999974

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=7.3e-50  Score=405.83  Aligned_cols=312  Identities=39%  Similarity=0.722  Sum_probs=237.2

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcC-CCCCceEEecceeecC-CeE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD-KGGNRCVQIRNWFDYR-NHI  173 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~-~~~~~i~~~~~~~~~~-~~~  173 (433)
                      .++|+++++||+|+||+||+|.+..+++.||||+++...........|+.+++.+.+.. .++.+++.++.++... .++
T Consensus       128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~  207 (467)
T PTZ00284        128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM  207 (467)
T ss_pred             CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence            57899999999999999999999999999999999755455555677899998887654 2455688888888754 689


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      |+|||++|++|.+++.+.+  .+++..+..|+.||+.||+|||+ .|||||||||+|||++.++...  ++......+  
T Consensus       208 ~iv~~~~g~~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~--~~~~~~~~~--  281 (467)
T PTZ00284        208 CIVMPKYGPCLLDWIMKHG--PFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVV--DPVTNRALP--  281 (467)
T ss_pred             EEEEeccCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccc--ccccccccC--
Confidence            9999999999999998754  79999999999999999999998 5999999999999997765321  221111110  


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHH
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL  332 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~  332 (433)
                             .....+||+|||.+..........+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+..+.+
T Consensus       282 -------~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~  354 (467)
T PTZ00284        282 -------PDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHL  354 (467)
T ss_pred             -------CCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence                   2335699999998876555555678999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCHHHHHHHhh-hhhhhhc-cCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          333 AMMERVLGPLPQHMLKRVDR-HAEKYVR-RGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       333 ~~i~~~~~~~p~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ..+...+|.+|..+...... ....++. .+.+. +  ......+...........      ......+.|||.+||++|
T Consensus       355 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~------~~~~~~~~dli~~mL~~d  425 (467)
T PTZ00284        355 HLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLR-P--CTDPKHLARIARARPVRE------VIRDDLLCDLIYGLLHYD  425 (467)
T ss_pred             HHHHHHcCCCCHHHHhhccchhHHHHhhhccccc-c--cCCHHHHHhhhcccchhh------hhchHHHHHHHHHhCCcC
Confidence            99999999999887654321 1111211 11110 0  000011111000000000      012457889999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCC
Q 013973          411 PTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       411 P~~R~ta~ell~hp~f~~~  429 (433)
                      |++|||++|+|+||||.+.
T Consensus       426 P~~R~ta~e~L~Hp~~~~~  444 (467)
T PTZ00284        426 RQKRLNARQMTTHPYVLKY  444 (467)
T ss_pred             hhhCCCHHHHhcCcccccc
Confidence            9999999999999999863

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=8.7e-53  Score=366.40  Aligned_cols=261  Identities=26%  Similarity=0.454  Sum_probs=223.1

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      .+.+.|++.+.||+|.|+.|+++.+..+|+.+|+|+++..   ....++..+|+.|-+.+     .||||+.+.+.+...
T Consensus         8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~L-----qHP~IvrL~~ti~~~   82 (355)
T KOG0033|consen    8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-----QHPNIVRLHDSIQEE   82 (355)
T ss_pred             ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhc-----CCCcEeehhhhhccc
Confidence            3457799999999999999999999999999999998632   23456677888888877     679999999999999


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      +..|||+|+| |++|..-+.++.  .+++..+..++.||+.||.|+|.+||||||+||+|+|+.+.              
T Consensus        83 ~~~ylvFe~m~G~dl~~eIV~R~--~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK--------------  146 (355)
T KOG0033|consen   83 SFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASK--------------  146 (355)
T ss_pred             ceeEEEEecccchHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeec--------------
Confidence            9999999999 999976665543  68999999999999999999999999999999999999653              


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                                ++.-.+||+|||+|.....+.  ...+|||+|||||++...+|+..+|||+.||+||-|+.|++||.+.+
T Consensus       147 ----------~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~  216 (355)
T KOG0033|consen  147 ----------AKGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED  216 (355)
T ss_pred             ----------cCCCceeecccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc
Confidence                      344578999999998777433  23689999999999999999999999999999999999999999877


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ....+..|.                       +|.++++.                      +.+++.++++++||++||
T Consensus       217 ~~rlye~I~-----------------------~g~yd~~~----------------------~~w~~is~~Ak~LvrrML  251 (355)
T KOG0033|consen  217 QHRLYEQIK-----------------------AGAYDYPS----------------------PEWDTVTPEAKSLIRRML  251 (355)
T ss_pred             HHHHHHHHh-----------------------ccccCCCC----------------------cccCcCCHHHHHHHHHHh
Confidence            776666543                       44444443                      235688999999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCC
Q 013973          408 RYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       408 ~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      ..||.+|+|+.|+|+|||+.+..
T Consensus       252 ~~dP~kRIta~EAL~HpWi~~r~  274 (355)
T KOG0033|consen  252 TVNPKKRITADEALKHPWICNRE  274 (355)
T ss_pred             ccChhhhccHHHHhCCchhcchH
Confidence            99999999999999999998653

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.9e-50  Score=376.67  Aligned_cols=271  Identities=25%  Similarity=0.387  Sum_probs=219.5

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      +.|++...||.|..++||+|+.+.+++.||||+++-.+  ...+...+|+..+..+     +||||+..+..|..+..++
T Consensus        26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~-----~HPNIv~~~~sFvv~~~LW  100 (516)
T KOG0582|consen   26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLI-----DHPNIVTYHCSFVVDSELW  100 (516)
T ss_pred             cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhc-----CCCCcceEEEEEEecceeE
Confidence            56999999999999999999999999999999997433  2346677899998888     8899999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +||.|| +|++.+.+.......|++..+..|++++++||.|||++|.||||||+.||||+++|.+||+|||.+.      
T Consensus       101 vVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa------  174 (516)
T KOG0582|consen  101 VVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSA------  174 (516)
T ss_pred             EeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeee------
Confidence            999999 9999999998776789999999999999999999999999999999999999988888888887653      


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhC--CCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                                  .|.|-|.......  .+++||++|||||++..  .+|+.|+||||||++..||.+|..||........
T Consensus       175 ------------~l~~~G~R~~~rf--~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkv  240 (516)
T KOG0582|consen  175 ------------SLFDSGDRQVTRF--NTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKV  240 (516)
T ss_pred             ------------eecccCceeeEee--ccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHH
Confidence                        2333331111111  45689999999999654  4699999999999999999999999998877665


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      +.+  ++-+.+|.-..             +       ....                 +....++..++.+|..||++||
T Consensus       241 Ll~--tLqn~pp~~~t-------------~-------~~~~-----------------d~~k~~~ksf~e~i~~CL~kDP  281 (516)
T KOG0582|consen  241 LLL--TLQNDPPTLLT-------------S-------GLDK-----------------DEDKKFSKSFREMIALCLVKDP  281 (516)
T ss_pred             HHH--HhcCCCCCccc-------------c-------cCCh-----------------HHhhhhcHHHHHHHHHHhhcCc
Confidence            543  33333331100             0       0000                 0112455689999999999999


Q ss_pred             CCCCCHHHHhcCCCCCCCCC
Q 013973          412 TDRLTAREALRHPFFTRDHL  431 (433)
Q Consensus       412 ~~R~ta~ell~hp~f~~~~~  431 (433)
                      ++||||.++|+|+||+....
T Consensus       282 ~kRptAskLlkh~FFk~~k~  301 (516)
T KOG0582|consen  282 SKRPTASKLLKHAFFKKAKS  301 (516)
T ss_pred             ccCCCHHHHhccHHHhhccc
Confidence            99999999999999987643

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-50  Score=391.63  Aligned_cols=253  Identities=28%  Similarity=0.450  Sum_probs=218.6

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhh-HHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY-REAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ...|....+||+|+.|.||.|....+++.||||.+...... ++-...|+.+|+..     +|+|||.+++.|...+.++
T Consensus       272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~-----~H~NiVnfl~Sylv~deLW  346 (550)
T KOG0578|consen  272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDL-----HHPNIVNFLDSYLVGDELW  346 (550)
T ss_pred             hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhc-----cchHHHHHHHHhcccceeE
Confidence            35688999999999999999999999999999999755443 44567899999888     7799999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +||||| ||+|.|.+...   .+++.++..|..+++.||+|||.+||+|||||.+|||+                     
T Consensus       347 VVMEym~ggsLTDvVt~~---~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL---------------------  402 (550)
T KOG0578|consen  347 VVMEYMEGGSLTDVVTKT---RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILL---------------------  402 (550)
T ss_pred             EEEeecCCCchhhhhhcc---cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEe---------------------
Confidence            999999 99999999875   59999999999999999999999999999999999999                     


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                            ..++.+||+|||++.......   .+.+||++|||||++....|++++||||||++++||+.|++||-..+...
T Consensus       403 ------~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Plr  476 (550)
T KOG0578|consen  403 ------TMDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR  476 (550)
T ss_pred             ------ccCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHH
Confidence                  455678999999887665543   55799999999999999999999999999999999999999998766666


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      .+..|... |.                     ..                        ...++.+|+.++|||.+||+.|
T Consensus       477 AlyLIa~n-g~---------------------P~------------------------lk~~~klS~~~kdFL~~cL~~d  510 (550)
T KOG0578|consen  477 ALYLIATN-GT---------------------PK------------------------LKNPEKLSPELKDFLDRCLVVD  510 (550)
T ss_pred             HHHHHhhc-CC---------------------CC------------------------cCCccccCHHHHHHHHHHhhcc
Confidence            55544322 11                     10                        1234578999999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCC
Q 013973          411 PTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       411 P~~R~ta~ell~hp~f~~~  429 (433)
                      +++|++|.|||+||||+..
T Consensus       511 v~~RasA~eLL~HpFl~~a  529 (550)
T KOG0578|consen  511 VEQRASAKELLEHPFLKMA  529 (550)
T ss_pred             hhcCCCHHHHhcChhhhhc
Confidence            9999999999999999654

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.2e-51  Score=365.94  Aligned_cols=242  Identities=29%  Similarity=0.453  Sum_probs=205.5

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeec---chhhHHHHHHHHHHHHHHHhcCCCCCceEEecc-eeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN-WFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~-~~~~~~  171 (433)
                      ..+|+++++||+|+||.||++.+..+|+.+|.|.+.-   ..+.+.....|+.+|++|     +||||++.++ .|..++
T Consensus        18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL-----~HpNIVqYy~~~f~~~~   92 (375)
T KOG0591|consen   18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQL-----NHPNIVQYYAHSFIEDN   92 (375)
T ss_pred             HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhc-----CCchHHHHHHHhhhccc
Confidence            3569999999999999999999999999999998862   345567778899999999     8899999998 565555


Q ss_pred             e-EEEEEecC-CCCHHHHHH--hcCCCCCCHHHHHHHHHHHHHHHHHHHH--CC--ceeccCCCCceEeeccCccccCCC
Q 013973          172 H-ICIVFEKL-GSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAFMHD--LC--MIHTDLKPENVLLVSSEYIKVPDY  243 (433)
Q Consensus       172 ~-~~lV~e~~-~~~L~~~l~--~~~~~~l~~~~~~~i~~qi~~~L~~LH~--~~--ivHrDlKp~NILl~~~~~~~i~df  243 (433)
                      . ++||||+| +|+|.+.++  +...+.+++..++.++.|++.||.+||+  ..  |+||||||.||+|           
T Consensus        93 evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl-----------  161 (375)
T KOG0591|consen   93 EVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFL-----------  161 (375)
T ss_pred             hhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEE-----------
Confidence            5 99999999 999999986  3445789999999999999999999998  44  9999999999999           


Q ss_pred             cCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCC
Q 013973          244 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE  320 (433)
Q Consensus       244 g~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~  320 (433)
                                      +.++.+||+|||++++.....   .+.+|||.||+||++.+.+|+.+|||||+||++|||..-+
T Consensus       162 ----------------~~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~  225 (375)
T KOG0591|consen  162 ----------------TANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQ  225 (375)
T ss_pred             ----------------cCCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcC
Confidence                            566788899999888776655   3469999999999999999999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhc-CCchhHH
Q 013973          321 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV-DHSAGDL  399 (433)
Q Consensus       321 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  399 (433)
                      +||.+.+-.+....|..                       |.+.  +                       .| +.+|.++
T Consensus       226 ~PF~g~n~~~L~~KI~q-----------------------gd~~--~-----------------------~p~~~YS~~l  257 (375)
T KOG0591|consen  226 SPFYGDNLLSLCKKIEQ-----------------------GDYP--P-----------------------LPDEHYSTDL  257 (375)
T ss_pred             CCcccccHHHHHHHHHc-----------------------CCCC--C-----------------------CcHHHhhhHH
Confidence            99999866555554433                       2211  0                       11 3567889


Q ss_pred             HHHHHhccccCCCCCCCH
Q 013973          400 THLLQGLLRYDPTDRLTA  417 (433)
Q Consensus       400 ~~li~~~L~~dP~~R~ta  417 (433)
                      ..||..|+..||++||+.
T Consensus       258 ~~li~~ci~vd~~~RP~t  275 (375)
T KOG0591|consen  258 RELINMCIAVDPEQRPDT  275 (375)
T ss_pred             HHHHHHHccCCcccCCCc
Confidence            999999999999999984

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-49  Score=384.13  Aligned_cols=262  Identities=34%  Similarity=0.581  Sum_probs=225.9

Q ss_pred             ceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh----hHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           93 ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        93 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      ..+...|++.+.||+|.||.||+|+.+.+|+.||+|++.+...    ..+...+|+.+|+++..    |+||+.+++.|+
T Consensus        31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~----hpniv~l~~~~e  106 (382)
T KOG0032|consen   31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSG----HPNIVQLKDAFE  106 (382)
T ss_pred             ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccC----CCCEEEEEEEEE
Confidence            3455779999999999999999999999999999999975432    34578899999999942    789999999999


Q ss_pred             cCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC
Q 013973          169 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       169 ~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                      +...+++|||++ ||.|++.+...   .+++..+..++.||+.|+.|||+.|||||||||+|+|+....           
T Consensus       107 ~~~~~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~-----------  172 (382)
T KOG0032|consen  107 DPDSVYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKD-----------  172 (382)
T ss_pred             cCCeEEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeecccc-----------
Confidence            999999999999 99999999876   299999999999999999999999999999999999996432           


Q ss_pred             CCCCCCcccccCCCCCCEEEEecCCccccCCC--CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 013973          248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  325 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~  325 (433)
                                  ..++.+|++|||++......  ....+||+.|+|||++....|+..+||||+||++|.|++|.+||.+
T Consensus       173 ------------~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~  240 (382)
T KOG0032|consen  173 ------------EGSGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWG  240 (382)
T ss_pred             ------------CCCCcEEEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcC
Confidence                        23468999999999887763  2457999999999999999999999999999999999999999999


Q ss_pred             CChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHh
Q 013973          326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  405 (433)
Q Consensus       326 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  405 (433)
                      .+.......+.                       .+.+.++.                      +.++..+..+++||.+
T Consensus       241 ~~~~~~~~~i~-----------------------~~~~~f~~----------------------~~w~~is~~akd~i~~  275 (382)
T KOG0032|consen  241 ETEFEIFLAIL-----------------------RGDFDFTS----------------------EPWDDISESAKDFIRK  275 (382)
T ss_pred             CChhHHHHHHH-----------------------cCCCCCCC----------------------CCccccCHHHHHHHHH
Confidence            88766655332                       22222222                      2345778899999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCC
Q 013973          406 LLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       406 ~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      ||..||.+|+||.++|+|||++..
T Consensus       276 ll~~dp~~R~ta~~~L~HpWi~~~  299 (382)
T KOG0032|consen  276 LLEFDPRKRLTAAQALQHPWIKSI  299 (382)
T ss_pred             hcccCcccCCCHHHHhcCccccCC
Confidence            999999999999999999999864

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=1.5e-50  Score=388.20  Aligned_cols=249  Identities=29%  Similarity=0.509  Sum_probs=215.9

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      ++|.+.+.||+|+||+||+|+.+.+.+.||+|.+.+.   ++......+|+++++.+     .|+||+.++++|+...++
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~l-----kHpniv~m~esfEt~~~~   76 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSL-----KHPNIVEMLESFETSAHL   76 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhc-----CCcchhhHHHhhcccceE
Confidence            4688999999999999999999999999999999643   33445577899999999     779999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       174 ~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      ++|.||+-|+|+.+|...+  .++++.++.++.|++.||.|||+.+|+|||+||.|||+                     
T Consensus        77 ~vVte~a~g~L~~il~~d~--~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl---------------------  133 (808)
T KOG0597|consen   77 WVVTEYAVGDLFTILEQDG--KLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILL---------------------  133 (808)
T ss_pred             EEEehhhhhhHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeee---------------------
Confidence            9999999669999999876  89999999999999999999999999999999999999                     


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                            ++.+.+|+||||+|+......   +.+.|||.|||||++.+..|+..+|+||+||++||+++|++||...+..+
T Consensus       134 ------~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~  207 (808)
T KOG0597|consen  134 ------EKGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQ  207 (808)
T ss_pred             ------cCCCceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHH
Confidence                  666778888888887665544   33579999999999999999999999999999999999999998655554


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....|..                       ....|                          ++..+..+.+|+..+|++|
T Consensus       208 Lv~~I~~-----------------------d~v~~--------------------------p~~~S~~f~nfl~gLL~kd  238 (808)
T KOG0597|consen  208 LVKSILK-----------------------DPVKP--------------------------PSTASSSFVNFLQGLLIKD  238 (808)
T ss_pred             HHHHHhc-----------------------CCCCC--------------------------cccccHHHHHHHHHHhhcC
Confidence            4444322                       11122                          2356778999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCC
Q 013973          411 PTDRLTAREALRHPFFTR  428 (433)
Q Consensus       411 P~~R~ta~ell~hp~f~~  428 (433)
                      |.+|+|=.+++.|||.+.
T Consensus       239 P~~RltW~~Ll~HpF~k~  256 (808)
T KOG0597|consen  239 PAQRLTWTDLLGHPFWKG  256 (808)
T ss_pred             hhhcccHHHHhcChHHhh
Confidence            999999999999999875

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=1.2e-49  Score=367.16  Aligned_cols=284  Identities=31%  Similarity=0.510  Sum_probs=230.6

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh---hHHHHHHHHHHHHHHHhcCCCCCc-eEEecceeecCC-
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK---YREAAMIEIEVLQQLAKHDKGGNR-CVQIRNWFDYRN-  171 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~-i~~~~~~~~~~~-  171 (433)
                      ..|+.+++||+|+||+||+|+.+.+|+.||+|.++-...   ......+|+.+++.+.+     .+ |+.+.+++...+ 
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~-----~~~iv~L~dv~~~~~~   85 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSH-----ANHIVRLHDVIHTSNN   85 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCC-----CcceEEEEeeeeeccc
Confidence            457888999999999999999999999999999974433   34556889999999944     44 999999998876 


Q ss_pred             -----eEEEEEecCCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCc
Q 013973          172 -----HICIVFEKLGSSLYDFLRKNNY--RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  244 (433)
Q Consensus       172 -----~~~lV~e~~~~~L~~~l~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg  244 (433)
                           .+++||||+.-+|..++.....  ..++...++.++.||+.||+|||++||+||||||.||||+           
T Consensus        86 ~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~-----------  154 (323)
T KOG0594|consen   86 HRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLIS-----------  154 (323)
T ss_pred             ccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEEC-----------
Confidence                 8999999999999999987653  3688899999999999999999999999999999999995           


Q ss_pred             CCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCC
Q 013973          245 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGE  320 (433)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~  320 (433)
                                      ..+.+||+|||+|+...-+.   +..++|.+|.|||++.+. .|+..+||||+||+++||++++
T Consensus       155 ----------------~~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~  218 (323)
T KOG0594|consen  155 ----------------SSGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRR  218 (323)
T ss_pred             ----------------CCCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCC
Confidence                            45567777777776544222   335799999999999987 6999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHH
Q 013973          321 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  400 (433)
Q Consensus       321 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (433)
                      +.|.+..+.+++..|.+.+|.+.+..|+.+........     .++...             .... .....+..+++..
T Consensus       219 ~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~-----~f~~~~-------------~~~~-l~~~~~~~~~~~~  279 (323)
T KOG0594|consen  219 PLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKA-----PFPKWP-------------GPKD-LSSILPKLDPDGI  279 (323)
T ss_pred             CCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccc-----cCcCCC-------------Cccc-hHHhccccCccHH
Confidence            99999999999999999999998876665543332221     111110             0001 1111233446899


Q ss_pred             HHHHhccccCCCCCCCHHHHhcCCCCCCCCC
Q 013973          401 HLLQGLLRYDPTDRLTAREALRHPFFTRDHL  431 (433)
Q Consensus       401 ~li~~~L~~dP~~R~ta~ell~hp~f~~~~~  431 (433)
                      |++.+||+.+|.+|.||..+|+||||.....
T Consensus       280 dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~  310 (323)
T KOG0594|consen  280 ELLSKLLQYDPAKRISAKGALTHPYFSELPE  310 (323)
T ss_pred             HHHHHHhccCcccCcCHHHHhcChhhccccc
Confidence            9999999999999999999999999987754

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=6.6e-50  Score=374.83  Aligned_cols=255  Identities=31%  Similarity=0.480  Sum_probs=203.7

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh-hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC--eE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN--HI  173 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~--~~  173 (433)
                      .++...+.||+|+||.||++.+.++|..+|||.+..... ..+....|+.+|.++     .|++||++++......  .+
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l-----~~p~IV~~~G~~~~~~~~~~   91 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRL-----NHPNIVQYYGSSSSRENDEY   91 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhC-----CCCCEEeeCCccccccCeee
Confidence            347888999999999999999999999999998864321 145578899999999     5789999999855444  69


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      +|+|||+ +|+|.+++...+. .|++..++.++.||+.||+|||++|||||||||+|||++..                 
T Consensus        92 ~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~-----------------  153 (313)
T KOG0198|consen   92 NIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPS-----------------  153 (313)
T ss_pred             EeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCC-----------------
Confidence            9999999 9999999998876 79999999999999999999999999999999999999541                 


Q ss_pred             CcccccCCCCCCEEEEecCCccccCC------CCCceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCC
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERP------DQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQT  325 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~~  325 (433)
                               ++.+||+|||.+.....      ......||+.|||||++... ....++|||||||++.||+||..||..
T Consensus       154 ---------~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~  224 (313)
T KOG0198|consen  154 ---------NGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSE  224 (313)
T ss_pred             ---------CCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchh
Confidence                     34566666665553331      12336899999999999963 334599999999999999999999986


Q ss_pred             C-ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHH
Q 013973          326 H-ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  404 (433)
Q Consensus       326 ~-~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  404 (433)
                      . ...+.+..+..                      ..                         .....++.++.++++||.
T Consensus       225 ~~~~~~~~~~ig~----------------------~~-------------------------~~P~ip~~ls~~a~~Fl~  257 (313)
T KOG0198|consen  225 FFEEAEALLLIGR----------------------ED-------------------------SLPEIPDSLSDEAKDFLR  257 (313)
T ss_pred             hcchHHHHHHHhc----------------------cC-------------------------CCCCCCcccCHHHHHHHH
Confidence            3 22221111100                      00                         001234578899999999


Q ss_pred             hccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          405 GLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       405 ~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      +||++||++||||+++|.|||.++..
T Consensus       258 ~C~~~~p~~Rpta~eLL~hpf~~~~~  283 (313)
T KOG0198|consen  258 KCFKRDPEKRPTAEELLEHPFLKQNS  283 (313)
T ss_pred             HHhhcCcccCcCHHHHhhChhhhccc
Confidence            99999999999999999999998754

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=1.2e-48  Score=372.38  Aligned_cols=278  Identities=29%  Similarity=0.495  Sum_probs=220.5

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ++|++++.||.|+||.||+|.+..+++.||+|+++...  ........|+.+++.+     .|+||+++++++.+.+..+
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~   79 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNL-----KHANIVTLHDIIHTERCLT   79 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhC-----CCCCEeeEEEEEcCCCeEE
Confidence            56999999999999999999999999999999986422  2234566799999888     6789999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          175 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       175 lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      +||||+.++|.+++...+ ..+++..+..++.||+.||+|||++||+||||||+|||++.++                  
T Consensus        80 lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~------------------  140 (288)
T cd07871          80 LVFEYLDSDLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKG------------------  140 (288)
T ss_pred             EEEeCCCcCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC------------------
Confidence            999999779999987654 3589999999999999999999999999999999999995544                  


Q ss_pred             ccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                               .+||+|||++......   .....||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+
T Consensus       141 ---------~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~  211 (288)
T cd07871         141 ---------ELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKE  211 (288)
T ss_pred             ---------CEEECcCcceeeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                     4556666655432211   122468999999999876 568999999999999999999999999999888


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      .+..+...++..+.+.++.+....+.. .   ...|..              .... ........+.++.+||.+||+.|
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~--------------~~~~-~~~~~~~~~~~~~dll~~mL~~d  272 (288)
T cd07871         212 ELHLIFRLLGTPTEETWPGITSNEEFR-S---YLFPQY--------------RAQP-LINHAPRLDTDGIDLLSSLLLYE  272 (288)
T ss_pred             HHHHHHHHhCCCChHHhhccccchhhh-c---cccCcc--------------CCCc-hHHhCCCCCHHHHHHHHHhcCcC
Confidence            899999999988887766543221110 0   000000              0000 01122356778999999999999


Q ss_pred             CCCCCCHHHHhcCCCC
Q 013973          411 PTDRLTAREALRHPFF  426 (433)
Q Consensus       411 P~~R~ta~ell~hp~f  426 (433)
                      |.+|||++|+|+||||
T Consensus       273 p~~R~t~~~~l~hp~f  288 (288)
T cd07871         273 TKSRISAEAALRHSYF  288 (288)
T ss_pred             cccCCCHHHHhcCCCC
Confidence            9999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1e-50  Score=358.52  Aligned_cols=254  Identities=30%  Similarity=0.536  Sum_probs=216.9

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeec---------chhhHHHHHHHHHHHHHHHhcCCCCCceEEecce
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---------IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  166 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~---------~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~  166 (433)
                      -..|.-.+.||.|..++|.+|.++.+++.+|+|++.-         .....+....|+.||+++.    +||+|+++.++
T Consensus        16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~----GHP~II~l~D~   91 (411)
T KOG0599|consen   16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVM----GHPYIIDLQDV   91 (411)
T ss_pred             HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhc----CCCcEEEeeee
Confidence            3568888999999999999999999999999999851         1234566778999999994    67899999999


Q ss_pred             eecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcC
Q 013973          167 FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  245 (433)
Q Consensus       167 ~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~  245 (433)
                      |+.+..+++|+|.| .|.|+|||.+.-  .+++.+.+.|+.|++.|++|||.++||||||||+|||+             
T Consensus        92 yes~sF~FlVFdl~prGELFDyLts~V--tlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILl-------------  156 (411)
T KOG0599|consen   92 YESDAFVFLVFDLMPRGELFDYLTSKV--TLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILL-------------  156 (411)
T ss_pred             ccCcchhhhhhhhcccchHHHHhhhhe--eecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheee-------------
Confidence            99999999999999 999999998764  79999999999999999999999999999999999999             


Q ss_pred             CCCCCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhC------CCCCCcchhHHHHHHHHHHH
Q 013973          246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILG------LGWTYPCDIWSVGCILVELC  317 (433)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~------~~~~~~~DvwSlGv~l~ell  317 (433)
                                    +.+.++||+|||+++...++.  ...||||+|+|||.+..      .+|+..+|+||+||+||.|+
T Consensus       157 --------------ddn~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLL  222 (411)
T KOG0599|consen  157 --------------DDNMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLL  222 (411)
T ss_pred             --------------ccccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHH
Confidence                          667789999999998877665  34799999999999963      36899999999999999999


Q ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchh
Q 013973          318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG  397 (433)
Q Consensus       318 tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  397 (433)
                      .|++||-.....-.+.+                       |..|++.+...                      -|++.+.
T Consensus       223 aGcpPFwHRkQmlMLR~-----------------------ImeGkyqF~sp----------------------eWadis~  257 (411)
T KOG0599|consen  223 AGCPPFWHRKQMLMLRM-----------------------IMEGKYQFRSP----------------------EWADISA  257 (411)
T ss_pred             cCCCchhHHHHHHHHHH-----------------------HHhcccccCCc----------------------chhhccc
Confidence            99999965444444433                       33444433221                      2456778


Q ss_pred             HHHHHHHhccccCCCCCCCHHHHhcCCCCC
Q 013973          398 DLTHLLQGLLRYDPTDRLTAREALRHPFFT  427 (433)
Q Consensus       398 ~~~~li~~~L~~dP~~R~ta~ell~hp~f~  427 (433)
                      +.+|||.+||+.||.+|.|++|+|.||||.
T Consensus       258 ~~KdLIsrlLqVdp~~Ritake~LaHpff~  287 (411)
T KOG0599|consen  258 TVKDLISRLLQVDPTKRITAKEALAHPFFI  287 (411)
T ss_pred             cHHHHHHHHHeeCchhcccHHHHhcChHHH
Confidence            899999999999999999999999999994

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.2e-49  Score=366.65  Aligned_cols=277  Identities=31%  Similarity=0.551  Sum_probs=227.9

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC-----C
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR-----N  171 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~-----~  171 (433)
                      -.|.-.+++|+|+||.||+|....+++.||||.+-..+..   ..+|.++|+.+     .|||||.+..+|...     -
T Consensus        24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~---knrEl~im~~l-----~HpNIV~L~~~f~~~~~~d~~   95 (364)
T KOG0658|consen   24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY---KNRELQIMRKL-----DHPNIVRLLYFFSSSTESDEV   95 (364)
T ss_pred             EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc---CcHHHHHHHhc-----CCcCeeeEEEEEEecCCCchh
Confidence            3588999999999999999999999999999987544433   34689999877     789999999888532     2


Q ss_pred             eEEEEEecCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          172 HICIVFEKLGSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       172 ~~~lV~e~~~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      .+.+|||||..+|.++++..  .+..++.-.++-|+.||++||.|||+.||+||||||.|||++                
T Consensus        96 ~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD----------------  159 (364)
T KOG0658|consen   96 YLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVD----------------  159 (364)
T ss_pred             HHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEc----------------
Confidence            56799999999999999842  235799999999999999999999999999999999999996                


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                                ...+.+||||||.|+....+.  .+..-|..|+|||.+.+. .|+.+.||||.||++.||+-|++.|.+.
T Consensus       160 ----------~~tg~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~  229 (364)
T KOG0658|consen  160 ----------PDTGVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGD  229 (364)
T ss_pred             ----------CCCCeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCC
Confidence                      445789999999998765544  334669999999999986 5999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHH--hhhcCCchhHHHHHHH
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI--MQHVDHSAGDLTHLLQ  404 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~  404 (433)
                      +..+++..|.+.+|.++.+-...+......+      ..|.                +....  .-+....++++.+|+.
T Consensus       230 s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~------~~p~----------------ik~~~~~~~~~~~~~~d~~dll~  287 (364)
T KOG0658|consen  230 SSVDQLVEIIKVLGTPTREDIKSMNPNYTEF------KFPQ----------------IKAHPWHKVFFKRLPPDALDLLS  287 (364)
T ss_pred             CHHHHHHHHHHHhCCCCHHHHhhcCcccccc------cCcc----------------cccccceeecccCCCHHHHHHHH
Confidence            9999999999999999988766654432110      0110                00000  0123467889999999


Q ss_pred             hccccCCCCCCCHHHHhcCCCCCCC
Q 013973          405 GLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       405 ~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      ++|+++|.+|.++.|+|.||||...
T Consensus       288 ~~L~Y~P~~R~~~~~~l~h~fFdel  312 (364)
T KOG0658|consen  288 KLLQYSPSKRLSALEALAHPFFDEL  312 (364)
T ss_pred             HHhccChhhcCCHHHHhcchhhHHh
Confidence            9999999999999999999999753

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=3.9e-48  Score=368.37  Aligned_cols=280  Identities=32%  Similarity=0.597  Sum_probs=220.2

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      ++|++.+.||+|+||.||+|+++.+++.||+|+++...   ...+....|+.+++.+     .|++|+++++.+...+.+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~   75 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTL-----KQENIVELKEAFRRRGKL   75 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhC-----CCccccchhhhEecCCEE
Confidence            36999999999999999999999999999999987432   2345567788888888     668899999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       174 ~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      |+||||+.+++.+.+.... ..+++..++.++.||+.||.|||+.||+||||||+|||++.                   
T Consensus        76 ~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~-------------------  135 (287)
T cd07848          76 YLVFEYVEKNMLELLEEMP-NGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISH-------------------  135 (287)
T ss_pred             EEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC-------------------
Confidence            9999999555555554432 36999999999999999999999999999999999999954                   


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  329 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~  329 (433)
                              ++.+||+|||++.......    ....||+.|+|||++.+..++.++|+|||||++|||++|++||.+.+..
T Consensus       136 --------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~  207 (287)
T cd07848         136 --------NDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEI  207 (287)
T ss_pred             --------CCcEEEeeccCcccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHH
Confidence                    4456667777665432211    2346899999999999989999999999999999999999999998888


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +....+....+++|.............    ....++....             ...........++.++.+||.+||++
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-------------~~~~~~~~~~~~s~~~~dll~~~L~~  270 (287)
T cd07848         208 DQLFTIQKVLGPLPAEQMKLFYSNPRF----HGLRFPAVNH-------------PQSLERRYLGILSGVLLDLMKNLLKL  270 (287)
T ss_pred             HHHHHHHHhhCCCCHHHHHhhhccchh----cccccCcccC-------------cccHHHhhhcccCHHHHHHHHHHccC
Confidence            888888888899887765543221100    0011111000             00111223345788999999999999


Q ss_pred             CCCCCCCHHHHhcCCCC
Q 013973          410 DPTDRLTAREALRHPFF  426 (433)
Q Consensus       410 dP~~R~ta~ell~hp~f  426 (433)
                      ||++|||++|+|+||||
T Consensus       271 ~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         271 NPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             CcccCCCHHHHhcCCCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=5.6e-49  Score=371.10  Aligned_cols=262  Identities=27%  Similarity=0.400  Sum_probs=208.1

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh---------------hHHHHHHHHHHHHHHHhcCCCCC
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK---------------YREAAMIEIEVLQQLAKHDKGGN  158 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---------------~~~~~~~E~~~l~~l~~~~~~~~  158 (433)
                      ...++|++++.||+|.||.|.+|++..+++.||||++.+...               ..+...+|+.+|+++     +|+
T Consensus        94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl-----~H~  168 (576)
T KOG0585|consen   94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKL-----HHP  168 (576)
T ss_pred             eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhc-----CCc
Confidence            446789999999999999999999999999999999953211               124678899999999     779


Q ss_pred             ceEEecceeecC--CeEEEEEecC-CCCHHHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeec
Q 013973          159 RCVQIRNWFDYR--NHICIVFEKL-GSSLYDFLRKNNYRS-FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVS  234 (433)
Q Consensus       159 ~i~~~~~~~~~~--~~~~lV~e~~-~~~L~~~l~~~~~~~-l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~  234 (433)
                      |||+++++.++.  +.+|||+||| .|.+...   ..... |++.+++.|+.+++.||+|||.+|||||||||+|+||++
T Consensus       169 nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~---p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~  245 (576)
T KOG0585|consen  169 NVVKLIEVLDDPESDKLYLVLEYCSKGEVKWC---PPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSS  245 (576)
T ss_pred             CeeEEEEeecCcccCceEEEEEeccCCccccC---CCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcC
Confidence            999999999874  6899999999 6665322   22234 899999999999999999999999999999999999988


Q ss_pred             cCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCC----CCCcchhHHHH
Q 013973          235 SEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLG----WTYPCDIWSVG  310 (433)
Q Consensus       235 ~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlG  310 (433)
                      +|++||+|||.+...+.....      +         .-    ..-...+|||.|+|||.+.++.    .+.+.||||+|
T Consensus       246 ~g~VKIsDFGVs~~~~~~~~~------~---------~d----~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalG  306 (576)
T KOG0585|consen  246 DGTVKISDFGVSNEFPQGSDE------G---------SD----DQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALG  306 (576)
T ss_pred             CCcEEeeccceeeecccCCcc------c---------cH----HHHhhcCCCccccchHhhcCCCCccccchhhhhhhhh
Confidence            777777777766544332100      0         00    0001248999999999998733    35789999999


Q ss_pred             HHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhh
Q 013973          311 CILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ  390 (433)
Q Consensus       311 v~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (433)
                      |+||.|+.|+.||-+....+.+..|...                       .+.+|+.                      
T Consensus       307 VTLYCllfG~~PF~~~~~~~l~~KIvn~-----------------------pL~fP~~----------------------  341 (576)
T KOG0585|consen  307 VTLYCLLFGQLPFFDDFELELFDKIVND-----------------------PLEFPEN----------------------  341 (576)
T ss_pred             hhHHHhhhccCCcccchHHHHHHHHhcC-----------------------cccCCCc----------------------
Confidence            9999999999999988777777665432                       2222221                      


Q ss_pred             hcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          391 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       391 ~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                        ..+..+++|||.+||++||++|++..+|..|||.+..
T Consensus       342 --pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  342 --PEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD  378 (576)
T ss_pred             --ccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence              1356789999999999999999999999999999865

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-48  Score=373.15  Aligned_cols=250  Identities=26%  Similarity=0.370  Sum_probs=210.7

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++++.||+|+||.||+|.++.+++.||+|++....    ...+.+..|+.+++.+     .|+||+++++.+.+.+.
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~~   75 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEV-----SHPFIIRLFWTEHDQRF   75 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhC-----CCCcHhhhHhhhccCCe
Confidence            36999999999999999999999999999999986432    2334566788888888     67899999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +|+||||+ +++|.+++...+  .+++..+..++.||+.||+|||++||+||||||+|||++                  
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~------------------  135 (291)
T cd05612          76 LYMLMEYVPGGELFSYLRNSG--RFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLD------------------  135 (291)
T ss_pred             EEEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC------------------
Confidence            99999999 899999998754  799999999999999999999999999999999999994                  


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                               .++.+||+|||++..........+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.
T Consensus       136 ---------~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~  206 (291)
T cd05612         136 ---------KEGHIKLTDFGFAKKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGI  206 (291)
T ss_pred             ---------CCCCEEEEecCcchhccCCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                     45568888888877655444456799999999999999999999999999999999999999987665554


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      ...+..                       +...                          .+...+..+++||.+||+.||
T Consensus       207 ~~~i~~-----------------------~~~~--------------------------~~~~~~~~~~~li~~~l~~dp  237 (291)
T cd05612         207 YEKILA-----------------------GKLE--------------------------FPRHLDLYAKDLIKKLLVVDR  237 (291)
T ss_pred             HHHHHh-----------------------CCcC--------------------------CCccCCHHHHHHHHHHcCCCH
Confidence            433221                       1111                          122456789999999999999


Q ss_pred             CCCCC-----HHHHhcCCCCCCC
Q 013973          412 TDRLT-----AREALRHPFFTRD  429 (433)
Q Consensus       412 ~~R~t-----a~ell~hp~f~~~  429 (433)
                      .+|++     +.|+++||||+.-
T Consensus       238 ~~R~~~~~~~~~~~l~h~~~~~~  260 (291)
T cd05612         238 TRRLGNMKNGADDVKNHRWFKSV  260 (291)
T ss_pred             HHccCCccCCHHHHhcCccccCC
Confidence            99995     9999999999753

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=1.2e-48  Score=379.41  Aligned_cols=250  Identities=29%  Similarity=0.459  Sum_probs=211.3

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++.+.||+|+||.||+|.++.+++.||+|+++...    .....+..|+.+++.+     .|+||+++++.+...+.
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~~   92 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMEL-----SHPFIVNMMCSFQDENR   92 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-----CCCCCCcEEEEEEcCCE
Confidence            56999999999999999999999999999999997432    2334567788888888     67899999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +|+||||+ +++|.+++...+  .+++..+..++.||+.||+|||++||+||||||+|||+                   
T Consensus        93 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll-------------------  151 (329)
T PTZ00263         93 VYFLLEFVVGGELFTHLRKAG--RFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLL-------------------  151 (329)
T ss_pred             EEEEEcCCCCChHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEE-------------------
Confidence            99999999 899999998764  78999999999999999999999999999999999999                   


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                              +.++.+||+|||++..........+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.
T Consensus       152 --------~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~  223 (329)
T PTZ00263        152 --------DNKGHVKVTDFGFAKKVPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRI  223 (329)
T ss_pred             --------CCCCCEEEeeccCceEcCCCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHH
Confidence                    445568888888877655544556899999999999999999999999999999999999999987665443


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      ...+.                       .+.+..                          +...+.++++||.+||+.||
T Consensus       224 ~~~i~-----------------------~~~~~~--------------------------p~~~~~~~~~li~~~L~~dP  254 (329)
T PTZ00263        224 YEKIL-----------------------AGRLKF--------------------------PNWFDGRARDLVKGLLQTDH  254 (329)
T ss_pred             HHHHh-----------------------cCCcCC--------------------------CCCCCHHHHHHHHHHhhcCH
Confidence            33221                       111111                          22456688999999999999


Q ss_pred             CCCCC-----HHHHhcCCCCCCC
Q 013973          412 TDRLT-----AREALRHPFFTRD  429 (433)
Q Consensus       412 ~~R~t-----a~ell~hp~f~~~  429 (433)
                      .+|++     +++++.||||++.
T Consensus       255 ~~R~~~~~~~~~~ll~hp~f~~~  277 (329)
T PTZ00263        255 TKRLGTLKGGVADVKNHPYFHGA  277 (329)
T ss_pred             HHcCCCCCCCHHHHhcCCccCCC
Confidence            99997     7999999999864

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-47  Score=362.45  Aligned_cols=340  Identities=32%  Similarity=0.570  Sum_probs=266.2

Q ss_pred             CCCCceeecCceec-CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCC---C
Q 013973           83 KDGHYMFALGENLT-SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG---N  158 (433)
Q Consensus        83 ~~~~~~~~~~~~~~-~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~---~  158 (433)
                      .+|.+++.+|+.+. ++|.+.++||-|.|++||+|.+.++.+.||+|+.+....+.+..+.||.+|++++.+..++   .
T Consensus        63 kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~  142 (590)
T KOG1290|consen   63 KGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKK  142 (590)
T ss_pred             cCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence            35678899999998 8999999999999999999999999999999999988888999999999999999877433   4


Q ss_pred             ceEEecceeec----CCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCceEee
Q 013973          159 RCVQIRNWFDY----RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLV  233 (433)
Q Consensus       159 ~i~~~~~~~~~----~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~ivHrDlKp~NILl~  233 (433)
                      +||++++.|..    +.++|||+|++|.+|..+|...+.+.++...++.|+.||+.||.|||+ .||||-||||+|||+.
T Consensus       143 ~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~  222 (590)
T KOG1290|consen  143 CVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC  222 (590)
T ss_pred             eeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence            69999999975    469999999999999999999999999999999999999999999996 5799999999999997


Q ss_pred             ccCc----------------c-------cc--------------CCC--------------------cC--CC-------
Q 013973          234 SSEY----------------I-------KV--------------PDY--------------------KS--SL-------  247 (433)
Q Consensus       234 ~~~~----------------~-------~i--------------~df--------------------g~--~~-------  247 (433)
                      ....                .       +-              .++                    |.  ..       
T Consensus       223 ~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s  302 (590)
T KOG1290|consen  223 STEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQES  302 (590)
T ss_pred             ccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccc
Confidence            5410                0       00              000                    00  00       


Q ss_pred             -----CCCC------C--------------Cccc------------------------------c---------------
Q 013973          248 -----HTPK------D--------------SSYF------------------------------K---------------  257 (433)
Q Consensus       248 -----~~~~------~--------------~~~~------------------------------~---------------  257 (433)
                           ..+.      .              +...                              +               
T Consensus       303 ~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p  382 (590)
T KOG1290|consen  303 YNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNP  382 (590)
T ss_pred             cccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCC
Confidence                 0000      0              0000                              0               


Q ss_pred             ---cCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC------Ch
Q 013973          258 ---RMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH------EN  328 (433)
Q Consensus       258 ---~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~------~~  328 (433)
                         ....+..+||+|||.|++....-+.-..|..|.|||++.+.+|+..+||||++|++|||+||.+.|..+      .+
T Consensus       383 ~~~~~~~di~vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rD  462 (590)
T KOG1290|consen  383 DIPLPECDIRVKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRD  462 (590)
T ss_pred             CCCCCccceeEEEeeccchhhhhhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCcc
Confidence               012234689999999998776666667899999999999999999999999999999999999999643      47


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      .+.++.|..++|..|..+.-..+-.-..|-+.|.+..=.....       ..+..+......++...+.++.|||.-||+
T Consensus       463 EDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~-------WpL~~VL~eKY~~s~e~A~~fsdFL~PmLe  535 (590)
T KOG1290|consen  463 EDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKP-------WPLYEVLIEKYEWSEEDAQQFSDFLSPMLE  535 (590)
T ss_pred             HHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCC-------CcHHHHHHHHhCCCHHHHHHHHHHHHHHHh
Confidence            8899999999999999887666555555555555532111110       011111122233445667789999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCC
Q 013973          409 YDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       409 ~dP~~R~ta~ell~hp~f~~~  429 (433)
                      .+|++|+||.++|+|||+..-
T Consensus       536 f~PeKR~tA~~cl~hPwLn~~  556 (590)
T KOG1290|consen  536 FDPEKRPTAAQCLKHPWLNPV  556 (590)
T ss_pred             cCccccccHHHHhcCccccCC
Confidence            999999999999999999843

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.6e-50  Score=374.05  Aligned_cols=261  Identities=26%  Similarity=0.412  Sum_probs=216.0

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .+.|..-++||+||||.||-|+.+.||+.||+|.+.+.    .+...-...|..+|.++     +.+.||.+-..|++.+
T Consensus       184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV-----~s~FiVslaYAfeTkd  258 (591)
T KOG0986|consen  184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKV-----SSPFIVSLAYAFETKD  258 (591)
T ss_pred             ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHh-----ccCcEEEEeeeecCCC
Confidence            35789999999999999999999999999999988521    22334466789999998     6678999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+|+||..| ||+|.-+|...+...|++..+++|+.+|+.||++||+.+||+|||||+|||+++.|+             
T Consensus       259 ~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~Gh-------------  325 (591)
T KOG0986|consen  259 ALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGH-------------  325 (591)
T ss_pred             ceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCC-------------
Confidence            999999999 999999998888788999999999999999999999999999999999999965555             


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                                    +.|+|+|+|.......  ...+||.+|||||++.++.|+...|||||||++|||+.|+.||.....
T Consensus       326 --------------vRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~Ke  391 (591)
T KOG0986|consen  326 --------------VRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKE  391 (591)
T ss_pred             --------------eEeeccceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhh
Confidence                          5555555555443332  234899999999999999999999999999999999999999987654


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      ......+.+..                                             .+....+++.+|+++++|++.+|+
T Consensus       392 Kvk~eEvdrr~---------------------------------------------~~~~~ey~~kFS~eakslc~~LL~  426 (591)
T KOG0986|consen  392 KVKREEVDRRT---------------------------------------------LEDPEEYSDKFSEEAKSLCEGLLT  426 (591)
T ss_pred             hhhHHHHHHHH---------------------------------------------hcchhhcccccCHHHHHHHHHHHc
Confidence            43332222211                                             111223456889999999999999


Q ss_pred             cCCCCCCC-----HHHHhcCCCCCCCCCCC
Q 013973          409 YDPTDRLT-----AREALRHPFFTRDHLRR  433 (433)
Q Consensus       409 ~dP~~R~t-----a~ell~hp~f~~~~~~~  433 (433)
                      +||.+|+.     +++|.+||||++.+.||
T Consensus       427 Kdp~~RLGcrg~ga~evk~HpfFk~lnw~r  456 (591)
T KOG0986|consen  427 KDPEKRLGCRGEGAQEVKEHPFFKDLNWRR  456 (591)
T ss_pred             cCHHHhccCCCcCcchhhhCcccccCCHhH
Confidence            99999994     78999999999987664

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=1.3e-47  Score=368.01  Aligned_cols=284  Identities=26%  Similarity=0.428  Sum_probs=212.2

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ++|++.+.||+|+||.||+|.++.+++.||+|+++...  ........|+.+++.+     .|+||+++++++.+....|
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~   79 (303)
T cd07869           5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGL-----KHANIVLLHDIIHTKETLT   79 (303)
T ss_pred             ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhC-----CCCCcCeEEEEEecCCeEE
Confidence            67999999999999999999999999999999986432  2233456789999888     6789999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          175 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       175 lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      +||||++++|.+++.... ..+++..+..++.||+.||+|||++|||||||||+|||+++++                  
T Consensus        80 lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~------------------  140 (303)
T cd07869          80 LVFEYVHTDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTG------------------  140 (303)
T ss_pred             EEEECCCcCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC------------------
Confidence            999999889999987653 4689999999999999999999999999999999999995544                  


Q ss_pred             ccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCh-H
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN-L  329 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~~~~~-~  329 (433)
                               .+||+|||.+......   .....||+.|+|||++.+. .++.++|||||||++|+|++|..||.+..+ .
T Consensus       141 ---------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~  211 (303)
T cd07869         141 ---------ELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQ  211 (303)
T ss_pred             ---------CEEECCCCcceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHH
Confidence                     4555555555432211   1224689999999998764 588999999999999999999999987544 3


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +.+..+...++......+........ +. ...+..    ...         ..+....  .....+.++.+||.+||+.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~----~~~---------~~~~~~~--~~~~~~~~~~dli~~mL~~  274 (303)
T cd07869         212 DQLERIFLVLGTPNEDTWPGVHSLPH-FK-PERFTL----YSP---------KNLRQAW--NKLSYVNHAEDLASKLLQC  274 (303)
T ss_pred             HHHHHHHHHhCCCChhhccchhhccc-cc-cccccc----cCC---------ccHHHHh--hccCCChHHHHHHHHHhcc
Confidence            45555555566555443332211100 00 000000    000         0000000  0113456899999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCC
Q 013973          410 DPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       410 dP~~R~ta~ell~hp~f~~~~  430 (433)
                      ||++|||+.|+|+||||++.+
T Consensus       275 dp~~R~s~~~~l~h~~f~~~~  295 (303)
T cd07869         275 FPKNRLSAQAALSHEYFSDLP  295 (303)
T ss_pred             CchhccCHHHHhcCcccccCC
Confidence            999999999999999998764

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.8e-47  Score=372.29  Aligned_cols=279  Identities=32%  Similarity=0.497  Sum_probs=217.6

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC----
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR----  170 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~----  170 (433)
                      +|++.+.||+|+||.||+|++..+++.||||++...   ......+..|+.+++.+     .|+||+++++++...    
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~~~~~~   75 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLL-----RHPDIVEIKHIMLPPSRRE   75 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhC-----CCCCEeeecceEeccCCCC
Confidence            589999999999999999999999999999998632   12334567899999888     678999999887532    


Q ss_pred             -CeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 -NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 -~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                       ..+|+||||++++|.+++....  .+++..+..++.||+.||.|||++|||||||||+|||++.++.            
T Consensus        76 ~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~------------  141 (338)
T cd07859          76 FKDIYVVFELMESDLHQVIKAND--DLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCK------------  141 (338)
T ss_pred             CceEEEEEecCCCCHHHHHHhcc--cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCc------------
Confidence             3589999999889999987654  6999999999999999999999999999999999999965554            


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCC------CCceeecCcccchhhhhC--CCCCCcchhHHHHHHHHHHHhCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPD------QNYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEA  321 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~  321 (433)
                                     +||+|||++......      ....+||+.|+|||++.+  ..++.++|||||||++|||++|++
T Consensus       142 ---------------~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~  206 (338)
T cd07859         142 ---------------LKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKP  206 (338)
T ss_pred             ---------------EEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCC
Confidence                           555555554422111      122478999999999876  678999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhh-hhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHH
Q 013973          322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHA-EKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  400 (433)
Q Consensus       322 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (433)
                      ||.+.+....+..+....|..+......+.... ..+...-....+                   ..........++++.
T Consensus       207 pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~  267 (338)
T cd07859         207 LFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQP-------------------VPFSQKFPNADPLAL  267 (338)
T ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCC-------------------CchHHhcCCCChHHH
Confidence            999988888888888888888877766553321 111110000000                   000111234567899


Q ss_pred             HHHHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          401 HLLQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       401 ~li~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      +||.+||+.||++|||++|+|+||||++.
T Consensus       268 ~li~~~l~~~P~~Rpt~~e~l~hp~f~~~  296 (338)
T cd07859         268 RLLERLLAFDPKDRPTAEEALADPYFKGL  296 (338)
T ss_pred             HHHHHHcCcCcccCCCHHHHhcCchhhhc
Confidence            99999999999999999999999999753

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=2e-47  Score=384.25  Aligned_cols=279  Identities=28%  Similarity=0.523  Sum_probs=218.6

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec------
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY------  169 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~------  169 (433)
                      ..+|++.+.||+|+||.||+|.+..+++.||||++.....   ....|+.+++.+     .|+||+++++++..      
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~---~~~~Ei~il~~l-----~h~niv~l~~~~~~~~~~~~  136 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQ---YKNRELLIMKNL-----NHINIIFLKDYYYTECFKKN  136 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcc---hHHHHHHHHHhc-----CCCCCcceeeeEeecccccC
Confidence            4679999999999999999999999999999998864322   234688999888     67889998876632      


Q ss_pred             --CCeEEEEEecCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcC
Q 013973          170 --RNHICIVFEKLGSSLYDFLRK--NNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  245 (433)
Q Consensus       170 --~~~~~lV~e~~~~~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~  245 (433)
                        ...+++||||++++|.+++..  .....+++..++.++.||+.||.|||++|||||||||+|||++.+          
T Consensus       137 ~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~----------  206 (440)
T PTZ00036        137 EKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPN----------  206 (440)
T ss_pred             CCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCC----------
Confidence              235789999998889888753  223579999999999999999999999999999999999999532          


Q ss_pred             CCCCCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCC
Q 013973          246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEAL  322 (433)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P  322 (433)
                                      ...+||+|||+++......  ...+||+.|+|||++.+. .|+.++|||||||++|||++|.+|
T Consensus       207 ----------------~~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~p  270 (440)
T PTZ00036        207 ----------------THTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPI  270 (440)
T ss_pred             ----------------CCceeeeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence                            2357888888776443222  235789999999998764 699999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       323 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      |.+.+..+.+..+.+.+|..+.+.+.........      +.+|..              ....+...++...+.++.+|
T Consensus       271 f~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~------~~~~~~--------------~~~~l~~~~p~~~~~~~~~l  330 (440)
T PTZ00036        271 FSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYAD------IKFPDV--------------KPKDLKKVFPKGTPDDAINF  330 (440)
T ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhc------ccCCcc--------------CchhHHHHhccCCCHHHHHH
Confidence            9999888888888888888776655433221110      111110              00112222345677899999


Q ss_pred             HHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          403 LQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       403 i~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      |.+||++||.+|||+.|+|+||||..
T Consensus       331 i~~~L~~dP~~R~ta~e~l~hp~f~~  356 (440)
T PTZ00036        331 ISQFLKYEPLKRLNPIEALADPFFDD  356 (440)
T ss_pred             HHHHCCCChhHCcCHHHHhCChhHHh
Confidence            99999999999999999999999964

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=6.6e-48  Score=366.75  Aligned_cols=256  Identities=23%  Similarity=0.382  Sum_probs=206.4

Q ss_pred             EEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           99 YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      |++.+.||+|+||.||+|.+..+++.||+|++....    .....+..|+.++..+     +|++++.+.+.+.+.+.++
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-----~~~~iv~~~~~~~~~~~~~   76 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKV-----NSRFVVSLAYAYETKDALC   76 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhc-----CCCcEEEEEEEEccCCeEE
Confidence            889999999999999999999999999999986432    1223456788888888     6688999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +||||+ +++|.+++.......+++..+..++.|++.||+|||+.||+||||||+|||++                    
T Consensus        77 lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~--------------------  136 (285)
T cd05631          77 LVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLD--------------------  136 (285)
T ss_pred             EEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC--------------------
Confidence            999999 89999888765545799999999999999999999999999999999999994                    


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                             .++.++|+|||++.......  ....||..|+|||++.+..++.++|||||||++|||++|+.||...+....
T Consensus       137 -------~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~  209 (285)
T cd05631         137 -------DRGHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK  209 (285)
T ss_pred             -------CCCCEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh
Confidence                   44567777777765433221  234789999999999999999999999999999999999999987544222


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      ...+....                   ...                          ....+..++.++.+||.+||+.||
T Consensus       210 ~~~~~~~~-------------------~~~--------------------------~~~~~~~~s~~~~~li~~~l~~~P  244 (285)
T cd05631         210 REEVDRRV-------------------KED--------------------------QEEYSEKFSEDAKSICRMLLTKNP  244 (285)
T ss_pred             HHHHHHHh-------------------hcc--------------------------cccCCccCCHHHHHHHHHHhhcCH
Confidence            21111110                   000                          011233567889999999999999


Q ss_pred             CCCCC-----HHHHhcCCCCCCCCC
Q 013973          412 TDRLT-----AREALRHPFFTRDHL  431 (433)
Q Consensus       412 ~~R~t-----a~ell~hp~f~~~~~  431 (433)
                      ++||+     ++++++||||.+...
T Consensus       245 ~~R~~~~~~~~~~~~~h~~~~~~~~  269 (285)
T cd05631         245 KERLGCRGNGAAGVKQHPIFKNINF  269 (285)
T ss_pred             HHhcCCCCCCHHHHhcCHhhcCCCH
Confidence            99997     899999999987643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=2.3e-47  Score=363.56  Aligned_cols=279  Identities=29%  Similarity=0.485  Sum_probs=213.3

Q ss_pred             CcEEEEeeeeccccEEEEEEEECC-CCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceee----
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRE-RKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD----  168 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~-~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~----  168 (433)
                      ++|++++.||+|+||.||+|.+.. +++.||+|+++...   ........|+.+++.+...  .|+||+++++++.    
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~--~hpniv~~~~~~~~~~~   78 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF--EHPNVVRLFDVCTVSRT   78 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhccc--CCCCcceEEEEEecccC
Confidence            369999999999999999999854 56889999886322   2233456678877776432  5689999998874    


Q ss_pred             -cCCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC
Q 013973          169 -YRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       169 -~~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                       ....+++||||++++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.+            
T Consensus        79 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~------------  146 (290)
T cd07862          79 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSS------------  146 (290)
T ss_pred             CCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCC------------
Confidence             3567999999998899999987655679999999999999999999999999999999999999544            


Q ss_pred             CCCCCCcccccCCCCCCEEEEecCCccccCCC--CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 013973          248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  325 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~  325 (433)
                                     +.+||+|||++......  .....||+.|+|||++.+..++.++|||||||++|||++|.+||.+
T Consensus       147 ---------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~  211 (290)
T cd07862         147 ---------------GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG  211 (290)
T ss_pred             ---------------CCEEEccccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCC
Confidence                           45666666666533222  2334789999999999998999999999999999999999999999


Q ss_pred             CChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHh
Q 013973          326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  405 (433)
Q Consensus       326 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  405 (433)
                      .++.+.+..+....+......+...........       ..               .............+..+.+||.+
T Consensus       212 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-------~~---------------~~~~~~~~~~~~~~~~~~~li~~  269 (290)
T cd07862         212 SSDVDQLGKILDVIGLPGEEDWPRDVALPRQAF-------HS---------------KSAQPIEKFVTDIDELGKDLLLK  269 (290)
T ss_pred             CCHHHHHHHHHHHhCCCChhhchhhhcccchhc-------cC---------------CCCCCHHHHccCCCHHHHHHHHH
Confidence            888888888877776554432221110000000       00               00000111223567789999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCC
Q 013973          406 LLRYDPTDRLTAREALRHPFF  426 (433)
Q Consensus       406 ~L~~dP~~R~ta~ell~hp~f  426 (433)
                      ||+.||++|||+.|+|+||||
T Consensus       270 ~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         270 CLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             HhccCchhcCCHHHHhcCCCC
Confidence            999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.7e-49  Score=342.97  Aligned_cols=252  Identities=25%  Similarity=0.429  Sum_probs=216.7

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh----hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++.+.||+|-||.||+|+.+.++-.||+|++.+..-    ...+..+|++|-..|     .||||++++++|.+...
T Consensus        22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L-----~hpnilrlY~~fhd~~r   96 (281)
T KOG0580|consen   22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHL-----RHPNILRLYGYFHDSKR   96 (281)
T ss_pred             hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeeccc-----CCccHHhhhhheeccce
Confidence            669999999999999999999999999999999975432    223445566665555     78999999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +||++||. .|+|+..|+.....++++..+..|+.|++.||.|+|..+||||||||+|+|+..                 
T Consensus        97 iyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~-----------------  159 (281)
T KOG0580|consen   97 IYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGS-----------------  159 (281)
T ss_pred             eEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCC-----------------
Confidence            99999999 999999999777778999999999999999999999999999999999999954                 


Q ss_pred             CCcccccCCCCCCEEEEecCCccccC-CCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYER-PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                                .+.+||+|||.+.... ....+.|||..|.+||++.+..++..+|+|++|++.||++.|.+||......+
T Consensus       160 ----------~~~lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~e  229 (281)
T KOG0580|consen  160 ----------AGELKIADFGWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSE  229 (281)
T ss_pred             ----------CCCeeccCCCceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHH
Confidence                      4556777777665543 23456799999999999999999999999999999999999999999888777


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      .+..|.+.--.                                                 +++.++.+++|||..||.++
T Consensus       230 tYkrI~k~~~~-------------------------------------------------~p~~is~~a~dlI~~ll~~~  260 (281)
T KOG0580|consen  230 TYKRIRKVDLK-------------------------------------------------FPSTISGGAADLISRLLVKN  260 (281)
T ss_pred             HHHHHHHcccc-------------------------------------------------CCcccChhHHHHHHHHhccC
Confidence            77766554322                                                 23467889999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCC
Q 013973          411 PTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       411 P~~R~ta~ell~hp~f~~~  429 (433)
                      |.+|++..|++.|||....
T Consensus       261 p~~r~~l~~v~~hpwI~a~  279 (281)
T KOG0580|consen  261 PIERLALTEVMDHPWIVAN  279 (281)
T ss_pred             ccccccHHHHhhhHHHHhc
Confidence            9999999999999998653

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=8.5e-48  Score=374.80  Aligned_cols=251  Identities=28%  Similarity=0.449  Sum_probs=208.8

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCC-eEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~-~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      .++|++.+.||+|+||.||+|.++.++ ..||+|++....    ...+.+..|+.+++.+     +|+||+++++.+.+.
T Consensus        29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~Iv~~~~~~~~~  103 (340)
T PTZ00426         29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYI-----NHPFCVNLYGSFKDE  103 (340)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-----CCCCCcceEEEEEeC
Confidence            356999999999999999999876654 689999986432    2334566788888888     679999999999999


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      +.+|+||||+ +|+|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++                
T Consensus       104 ~~~~lv~Ey~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~----------------  165 (340)
T PTZ00426        104 SYLYLVLEFVIGGEFFTFLRRNK--RFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLD----------------  165 (340)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEEC----------------
Confidence            9999999999 899999998764  799999999999999999999999999999999999994                


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChH
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  329 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~  329 (433)
                                 .++.+||+|||++..........+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..
T Consensus       166 -----------~~~~ikL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~  234 (340)
T PTZ00426        166 -----------KDGFIKMTDFGFAKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL  234 (340)
T ss_pred             -----------CCCCEEEecCCCCeecCCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH
Confidence                       455677777777765544445568999999999999989999999999999999999999999876654


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      .....+..                       +...                          .+...+.++.+||++||+.
T Consensus       235 ~~~~~i~~-----------------------~~~~--------------------------~p~~~~~~~~~li~~~l~~  265 (340)
T PTZ00426        235 LIYQKILE-----------------------GIIY--------------------------FPKFLDNNCKHLMKKLLSH  265 (340)
T ss_pred             HHHHHHhc-----------------------CCCC--------------------------CCCCCCHHHHHHHHHHccc
Confidence            44333211                       1111                          1234567889999999999


Q ss_pred             CCCCCC-----CHHHHhcCCCCCCC
Q 013973          410 DPTDRL-----TAREALRHPFFTRD  429 (433)
Q Consensus       410 dP~~R~-----ta~ell~hp~f~~~  429 (433)
                      ||++|+     +++++++||||++.
T Consensus       266 dp~~R~~~~~~~~~~~~~hp~f~~~  290 (340)
T PTZ00426        266 DLTKRYGNLKKGAQNVKEHPWFGNI  290 (340)
T ss_pred             CHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            999996     89999999999864

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=7.4e-48  Score=373.00  Aligned_cols=244  Identities=25%  Similarity=0.431  Sum_probs=201.2

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEe
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  178 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e  178 (433)
                      +.||+|+||.||+|.++.+++.||+|+++...    ........|+.+++.+     .|++|+.+++.+...+.+|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~hp~i~~~~~~~~~~~~~~lv~e   75 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNT-----RHPFLTALKYSFQTHDRLCFVME   75 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-----CCCCCCCEEEEEEcCCEEEEEEe
Confidence            46999999999999999999999999997432    2234456788888877     67899999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccc
Q 013973          179 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  257 (433)
Q Consensus       179 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~  257 (433)
                      |+ +++|.+++....  .+++..+..++.||+.||+|||++|||||||||+|||++.                       
T Consensus        76 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~-----------------------  130 (323)
T cd05571          76 YANGGELFFHLSRER--VFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDK-----------------------  130 (323)
T ss_pred             CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECC-----------------------
Confidence            99 899999998754  7999999999999999999999999999999999999954                       


Q ss_pred             cCCCCCCEEEEecCCccccCC---CCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 013973          258 RMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  334 (433)
Q Consensus       258 ~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~  334 (433)
                          ++.+||+|||++.....   .....+||+.|+|||++.+..++.++|||||||++|||++|..||...+.......
T Consensus       131 ----~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~  206 (323)
T cd05571         131 ----DGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL  206 (323)
T ss_pred             ----CCCEEEeeCCCCcccccCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHH
Confidence                45577777776653221   12345799999999999999999999999999999999999999987655443332


Q ss_pred             HHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCC
Q 013973          335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  414 (433)
Q Consensus       335 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  414 (433)
                      +..                       +...                          .+..++.++.+||.+||+.||++|
T Consensus       207 ~~~-----------------------~~~~--------------------------~p~~~~~~~~~li~~~L~~dP~~R  237 (323)
T cd05571         207 ILM-----------------------EEIR--------------------------FPRTLSPEAKSLLAGLLKKDPKQR  237 (323)
T ss_pred             HHc-----------------------CCCC--------------------------CCCCCCHHHHHHHHHHccCCHHHc
Confidence            211                       1111                          123567789999999999999999


Q ss_pred             C-----CHHHHhcCCCCCCC
Q 013973          415 L-----TAREALRHPFFTRD  429 (433)
Q Consensus       415 ~-----ta~ell~hp~f~~~  429 (433)
                      |     ++.++++||||+..
T Consensus       238 ~~~~~~~~~~ll~h~~f~~~  257 (323)
T cd05571         238 LGGGPEDAKEIMEHRFFASI  257 (323)
T ss_pred             CCCCCCCHHHHHcCCCcCCC
Confidence            9     89999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=3e-47  Score=374.66  Aligned_cols=279  Identities=22%  Similarity=0.311  Sum_probs=210.0

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++++.||+|+||+||+|.++.+++.||+|+++...    .....+..|+.++..+     +|++|+++++.+.+...
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~-----~~~~iv~~~~~~~~~~~   75 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEA-----DSLWVVKMFYSFQDKLN   75 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhC-----CCCCcceEEEEEecCCe
Confidence            36999999999999999999999999999999997432    2234456688888777     67899999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +|+||||+ ||+|.+++...+  .+++..++.++.||+.||+|||++|||||||||+|||++.+++++|+|||++.....
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~  153 (363)
T cd05628          76 LYLIMEFLPGGDMMTLLMKKD--TLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKK  153 (363)
T ss_pred             EEEEEcCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccc
Confidence            99999999 999999998754  799999999999999999999999999999999999999989999999988764432


Q ss_pred             CCcc-cccCCCCCCEEEEecCCccccC------------CCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh
Q 013973          252 DSSY-FKRMPKSSAIKVIDFGSTTYER------------PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT  318 (433)
Q Consensus       252 ~~~~-~~~~~~~~~~kl~Dfg~a~~~~------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt  318 (433)
                      .... +.+  ........|+.......            ......+||+.|+|||++.+..++.++|||||||++|||++
T Consensus       154 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~  231 (363)
T cd05628         154 AHRTEFYR--NLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLI  231 (363)
T ss_pred             cccccccc--cccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHh
Confidence            1100 000  00000011111110000            00123579999999999999999999999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhH
Q 013973          319 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  398 (433)
Q Consensus       319 g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (433)
                      |..||.+.+..+....+.....                     .+..|+                        ...++.+
T Consensus       232 G~~Pf~~~~~~~~~~~i~~~~~---------------------~~~~p~------------------------~~~~s~~  266 (363)
T cd05628         232 GYPPFCSETPQETYKKVMNWKE---------------------TLIFPP------------------------EVPISEK  266 (363)
T ss_pred             CCCCCCCCCHHHHHHHHHcCcC---------------------cccCCC------------------------cCCCCHH
Confidence            9999988766555444322110                     011111                        1135678


Q ss_pred             HHHHHHhccccCCC---CCCCHHHHhcCCCCCCCC
Q 013973          399 LTHLLQGLLRYDPT---DRLTAREALRHPFFTRDH  430 (433)
Q Consensus       399 ~~~li~~~L~~dP~---~R~ta~ell~hp~f~~~~  430 (433)
                      +++||.+|+. +|.   .||+++|+++||||+...
T Consensus       267 ~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~~  300 (363)
T cd05628         267 AKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGVD  300 (363)
T ss_pred             HHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCCC
Confidence            9999998775 444   468999999999998653

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=4.3e-47  Score=374.77  Aligned_cols=282  Identities=27%  Similarity=0.466  Sum_probs=223.9

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC---
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN---  171 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~---  171 (433)
                      +|++++.||+|+||.||+|.+..+++.||||.+...   ......+..|+.+++.+     .|+||+++++++...+   
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~   75 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFF-----KHDNVLSALDILQPPHIDP   75 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhC-----CCCCcCCHhheecCCCccc
Confidence            378999999999999999999999999999988632   12334567788888887     6788999999998776   


Q ss_pred             --eEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          172 --HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       172 --~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                        .+|+||||++++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++             
T Consensus        76 ~~~~~lv~e~~~~~l~~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~-------------  140 (372)
T cd07853          76 FEEIYVVTELMQSDLHKIIVSPQ--PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNC-------------  140 (372)
T ss_pred             cceEEEEeeccccCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCC-------------
Confidence              899999999889999887654  799999999999999999999999999999999999995544             


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                                    .+||+|||++.......    ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.
T Consensus       141 --------------~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~  206 (372)
T cd07853         141 --------------VLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQ  206 (372)
T ss_pred             --------------CEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCC
Confidence                          55666666554332211    223678999999999875 47899999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHH
Q 013973          325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  404 (433)
Q Consensus       325 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  404 (433)
                      +.+..+.+..+...+|..+.+.+.........++.......+.                 ...........+.++.+||.
T Consensus       207 ~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~li~  269 (372)
T cd07853         207 AQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPS-----------------LPVLYTLSSQATHEAVHLLC  269 (372)
T ss_pred             CCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCc-----------------hHHhcccCCCCCHHHHHHHH
Confidence            9999999999999999888766655544444444322111110                 00111122355778999999


Q ss_pred             hccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          405 GLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       405 ~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      +||+.||++|||+.|+|+||||....
T Consensus       270 ~mL~~dP~~R~t~~e~l~hp~~~~~~  295 (372)
T cd07853         270 RMLVFDPDKRISAADALAHPYLDEGR  295 (372)
T ss_pred             HhCCCChhhCcCHHHHhcCHhhCCCc
Confidence            99999999999999999999998743

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.2e-47  Score=378.29  Aligned_cols=278  Identities=21%  Similarity=0.352  Sum_probs=213.5

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      ..+|++++.||+|+||.||+|.+..+++.||+|...     ......|+.+++.+     .|+||+++++++......|+
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-----~~~~~~E~~il~~l-----~HpnIv~~~~~~~~~~~~~l  160 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-----RGGTATEAHILRAI-----NHPSIIQLKGTFTYNKFTCL  160 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-----hhhhHHHHHHHHhC-----CCCCCCCEeEEEEECCeeEE
Confidence            357999999999999999999999999999999754     23457799999998     67999999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          176 VFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       176 V~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      |||+++++|.+++....  .+++..++.++.||+.||.|||++|||||||||+|||++.                     
T Consensus       161 v~e~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~---------------------  217 (391)
T PHA03212        161 ILPRYKTDLYCYLAAKR--NIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINH---------------------  217 (391)
T ss_pred             EEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcC---------------------
Confidence            99999889999987654  6899999999999999999999999999999999999944                     


Q ss_pred             cccCCCCCCEEEEecCCccccCCC----CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC-----
Q 013973          256 FKRMPKSSAIKVIDFGSTTYERPD----QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH-----  326 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~-----  326 (433)
                            ++.+||+|||++......    ....+||+.|+|||++.+..++.++|||||||++|||++|..||-..     
T Consensus       218 ------~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~  291 (391)
T PHA03212        218 ------PGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDG  291 (391)
T ss_pred             ------CCCEEEEeCCcccccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccc
Confidence                  455777777776532211    12347999999999999999999999999999999999999877432     


Q ss_pred             --ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhh-c--cCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          327 --ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYV-R--RGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       327 --~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                        .....+..+....|..|.+............. .  ......+.....+.                 .....+.++.+
T Consensus       292 ~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~l~~  354 (391)
T PHA03212        292 DCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWT-----------------NLYELPIDLEY  354 (391)
T ss_pred             cCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHH-----------------HHhhhhhhHHH
Confidence              23456677777777766543211111111000 0  00000000000000                 01134568899


Q ss_pred             HHHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          402 LLQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       402 li~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      ||.+||++||++||||.|+|+||||+..
T Consensus       355 Li~~mL~~dP~~Rpta~elL~hp~f~~~  382 (391)
T PHA03212        355 LICKMLAFDAHHRPSAEALLDFAAFQDI  382 (391)
T ss_pred             HHHHHhcCChhhCCCHHHHhcChhhccC
Confidence            9999999999999999999999999874

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=1.3e-46  Score=369.72  Aligned_cols=291  Identities=27%  Similarity=0.469  Sum_probs=224.6

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|++...   .........|+.+++.+     +|+||+++++++...
T Consensus        18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~   92 (359)
T cd07876          18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCV-----NHKNIISLLNVFTPQ   92 (359)
T ss_pred             hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhC-----CCCCEeeeeeeeccC
Confidence            3467899999999999999999999999999999998632   23345566788888887     678999999988644


Q ss_pred             ------CeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCc
Q 013973          171 ------NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  244 (433)
Q Consensus       171 ------~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg  244 (433)
                            ..+|+||||++++|.+.+..    .+++..+..++.||+.||.|||++||+||||||+|||++.          
T Consensus        93 ~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~----------  158 (359)
T cd07876          93 KSLEEFQDVYLVMELMDANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS----------  158 (359)
T ss_pred             CCccccceeEEEEeCCCcCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC----------
Confidence                  35799999998888887753    5889999999999999999999999999999999999954          


Q ss_pred             CCCCCCCCCcccccCCCCCCEEEEecCCccccCCC--CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCC
Q 013973          245 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL  322 (433)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P  322 (433)
                                       ++.+||+|||++......  .....||+.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus       159 -----------------~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~p  221 (359)
T cd07876         159 -----------------DCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVI  221 (359)
T ss_pred             -----------------CCCEEEecCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCC
Confidence                             445666666666533221  1234789999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       323 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      |.+.+..+.+..+...++..+..+..........+..... .++.... .+.+.... .    ..........+.++++|
T Consensus       222 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~-~----~~~~~~~~~~~~~~~~l  294 (359)
T cd07876         222 FQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRP-QYPGISF-EELFPDWI-F----PSESERDKLKTSQARDL  294 (359)
T ss_pred             CCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCC-CCCCcch-hhhccccc-c----ccccccccccchhHHHH
Confidence            9998888888888888898888877776655555543211 1111000 00000000 0    00001122346789999


Q ss_pred             HHhccccCCCCCCCHHHHhcCCCCC
Q 013973          403 LQGLLRYDPTDRLTAREALRHPFFT  427 (433)
Q Consensus       403 i~~~L~~dP~~R~ta~ell~hp~f~  427 (433)
                      |.+||+.||++|||+.|+|+||||+
T Consensus       295 i~~mL~~dP~~R~t~~e~l~hp~~~  319 (359)
T cd07876         295 LSKMLVIDPDKRISVDEALRHPYIT  319 (359)
T ss_pred             HHHHhccCcccCCCHHHHhcCchhh
Confidence            9999999999999999999999996

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.7e-47  Score=368.96  Aligned_cols=258  Identities=25%  Similarity=0.388  Sum_probs=212.0

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++++.||+|+||.||+|++..+++.||+|+++...    .....+..|+.++..+     .|++|+++++.+...+.
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-----~h~~iv~~~~~~~~~~~   75 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTT-----KSEWLVKLLYAFQDDEY   75 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhC-----CCCCCccEEEEEEcCCE
Confidence            36999999999999999999999999999999997432    2234456788888777     57899999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +||||||+ |++|.+++...+  .+++..++.++.||+.||.|||++||+||||||+|||++                  
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~------------------  135 (333)
T cd05600          76 LYLAMEYVPGGDFRTLLNNLG--VLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLID------------------  135 (333)
T ss_pred             EEEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC------------------
Confidence            99999999 999999997654  799999999999999999999999999999999999994                  


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                               .++.+||+|||++..........+||+.|+|||++.+..++.++|||||||++|||++|..||...+..+.
T Consensus       136 ---------~~~~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~  206 (333)
T cd05600         136 ---------ASGHIKLTDFGLSKGIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET  206 (333)
T ss_pred             ---------CCCCEEEEeCcCCcccccccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH
Confidence                     45568888888777555444556899999999999999999999999999999999999999988766555


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      ...+......                     +..|....                    ....++.++.+||.+||+.+|
T Consensus       207 ~~~i~~~~~~---------------------~~~~~~~~--------------------~~~~~s~~~~~li~~~l~~~~  245 (333)
T cd05600         207 WENLKYWKET---------------------LQRPVYDD--------------------PRFNLSDEAWDLITKLINDPS  245 (333)
T ss_pred             HHHHHhcccc---------------------ccCCCCCc--------------------cccccCHHHHHHHHHHhhChh
Confidence            4433221100                     00010000                    002457789999999999999


Q ss_pred             CCCCCHHHHhcCCCCCCC
Q 013973          412 TDRLTAREALRHPFFTRD  429 (433)
Q Consensus       412 ~~R~ta~ell~hp~f~~~  429 (433)
                      .+|+++.|+++||||++.
T Consensus       246 ~rr~s~~~ll~h~~~~~~  263 (333)
T cd05600         246 RRFGSLEDIKNHPFFKEV  263 (333)
T ss_pred             hhcCCHHHHHhCcccCCC
Confidence            999999999999999864

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2.5e-48  Score=359.72  Aligned_cols=250  Identities=28%  Similarity=0.488  Sum_probs=218.2

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh----hHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      .+..+|++.+.||+|.||+|-+|+....|+.||||.+++.+.    ..-.+.+|++||..|     +||||+++++.|+.
T Consensus        50 nlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsL-----NHPhII~IyEVFEN  124 (668)
T KOG0611|consen   50 NLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSL-----NHPHIIQIYEVFEN  124 (668)
T ss_pred             chhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhc-----CCCceeehhhhhcC
Confidence            445689999999999999999999999999999999975432    223356799999998     88999999999999


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      .+.+.|||||. +|.|+||+...+  .|++.+++.++.||.+|+.|||++++||||||.+|||+                
T Consensus       125 kdKIvivMEYaS~GeLYDYiSer~--~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILL----------------  186 (668)
T KOG0611|consen  125 KDKIVIVMEYASGGELYDYISERG--SLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILL----------------  186 (668)
T ss_pred             CceEEEEEEecCCccHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHhhccceecccchhheee----------------
Confidence            99999999999 999999998876  89999999999999999999999999999999999999                


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCC-CcchhHHHHHHHHHHHhCCCCCCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWT-YPCDIWSVGCILVELCTGEALFQT  325 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlGv~l~elltg~~Pf~~  325 (433)
                                 |.++++||+|||++..+....  .++||++-|.+||++.+.+|. +.+|.|||||+||.|+.|..||++
T Consensus       187 -----------D~N~NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG  255 (668)
T KOG0611|consen  187 -----------DQNNNIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDG  255 (668)
T ss_pred             -----------cCCCCeeeeccchhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCC
Confidence                       677789999999887665544  568999999999999999985 899999999999999999999999


Q ss_pred             CChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHh
Q 013973          326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  405 (433)
Q Consensus       326 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  405 (433)
                      .+....+.+|                       ..|.+.-|                           .-+.++..||++
T Consensus       256 ~Dhk~lvrQI-----------------------s~GaYrEP---------------------------~~PSdA~gLIRw  285 (668)
T KOG0611|consen  256 RDHKRLVRQI-----------------------SRGAYREP---------------------------ETPSDASGLIRW  285 (668)
T ss_pred             chHHHHHHHh-----------------------hcccccCC---------------------------CCCchHHHHHHH
Confidence            8776655543                       33333222                           234478889999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCC
Q 013973          406 LLRYDPTDRLTAREALRHPFFT  427 (433)
Q Consensus       406 ~L~~dP~~R~ta~ell~hp~f~  427 (433)
                      ||-+||++|.|+.++-.|=|+.
T Consensus       286 mLmVNP~RRATieDiAsHWWvN  307 (668)
T KOG0611|consen  286 MLMVNPERRATIEDIASHWWVN  307 (668)
T ss_pred             HHhcCcccchhHHHHhhhheee
Confidence            9999999999999999998875

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.5e-47  Score=373.58  Aligned_cols=280  Identities=24%  Similarity=0.383  Sum_probs=212.3

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++++.||+|+||.||+|++..+++.||||+++...    .....+..|+.++..+     +|++|+++++.+.+.++
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-----~h~~iv~~~~~~~~~~~   75 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEA-----DNPWVVKLYYSFQDENY   75 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-----CCCCCcceEEEEEcCCe
Confidence            36999999999999999999999999999999997432    2233456788888887     67999999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +|+||||+ +|+|.+++...+  .+++..++.++.||+.||+|||++|||||||||+|||++.++.++|+|||++.....
T Consensus        76 ~~lv~E~~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~  153 (364)
T cd05599          76 LYLIMEYLPGGDMMTLLMKKD--TFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKK  153 (364)
T ss_pred             EEEEECCCCCcHHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccc
Confidence            99999999 899999998754  699999999999999999999999999999999999999999999999998765432


Q ss_pred             CCcc--cccCCCCCCEEEEecCCccccCC------------CCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHH
Q 013973          252 DSSY--FKRMPKSSAIKVIDFGSTTYERP------------DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC  317 (433)
Q Consensus       252 ~~~~--~~~~~~~~~~kl~Dfg~a~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ell  317 (433)
                      ....  ..........-..++........            .....+||+.|+|||++.+..++.++|||||||++|||+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~  233 (364)
T cd05599         154 SHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEML  233 (364)
T ss_pred             cccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhh
Confidence            1110  00000000000011111100000            011247999999999999999999999999999999999


Q ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchh
Q 013973          318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG  397 (433)
Q Consensus       318 tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  397 (433)
                      +|..||.+.+..+....+.....                     .+..|.                        ...+++
T Consensus       234 ~G~~Pf~~~~~~~~~~~i~~~~~---------------------~~~~~~------------------------~~~~s~  268 (364)
T cd05599         234 VGYPPFCSDNPQETYRKIINWKE---------------------TLQFPD------------------------EVPLSP  268 (364)
T ss_pred             cCCCCCCCCCHHHHHHHHHcCCC---------------------ccCCCC------------------------CCCCCH
Confidence            99999987766554433221100                     000110                        114567


Q ss_pred             HHHHHHHhccccCCCCCCC---HHHHhcCCCCCCC
Q 013973          398 DLTHLLQGLLRYDPTDRLT---AREALRHPFFTRD  429 (433)
Q Consensus       398 ~~~~li~~~L~~dP~~R~t---a~ell~hp~f~~~  429 (433)
                      ++.+||.+||. +|.+|++   +.|+++||||+..
T Consensus       269 ~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~  302 (364)
T cd05599         269 EAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV  302 (364)
T ss_pred             HHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence            89999999997 9999998   9999999999764

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9e-49  Score=353.72  Aligned_cols=251  Identities=27%  Similarity=0.472  Sum_probs=212.6

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      -++|..+++||+|.||+|-+|+.+.+++.||||++++.    +....-...|-.+|+..     .||.+..+...|+..+
T Consensus       167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~-----~HPFLt~LKYsFQt~d  241 (516)
T KOG0690|consen  167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNC-----RHPFLTSLKYSFQTQD  241 (516)
T ss_pred             cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhc-----cCcHHHHhhhhhccCc
Confidence            36799999999999999999999999999999999753    23334455688888877     6789999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      ++|+||||. ||.|+-+|...  +.|+++.+++|-.+|+.||.|||+++||+||||.+|+|++.                
T Consensus       242 rlCFVMeyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDk----------------  303 (516)
T KOG0690|consen  242 RLCFVMEYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDK----------------  303 (516)
T ss_pred             eEEEEEEEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheecc----------------
Confidence            999999999 99999888765  48999999999999999999999999999999999999954                


Q ss_pred             CCCcccccCCCCCCEEEEecCCcccc---CCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYE---RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                                 ++++||+|||++...   +....++||||.|+|||++....|+.++|||.+||+||||++|++||...+
T Consensus       304 -----------DGHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~d  372 (516)
T KOG0690|consen  304 -----------DGHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKD  372 (516)
T ss_pred             -----------CCceEeeecccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccc
Confidence                       455566666665422   223356899999999999999999999999999999999999999998877


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ....+..|.-.                                                 ...++..++++++.|+..+|
T Consensus       373 h~kLFeLIl~e-------------------------------------------------d~kFPr~ls~eAktLLsGLL  403 (516)
T KOG0690|consen  373 HEKLFELILME-------------------------------------------------DLKFPRTLSPEAKTLLSGLL  403 (516)
T ss_pred             hhHHHHHHHhh-------------------------------------------------hccCCccCCHHHHHHHHHHh
Confidence            66655544321                                                 12245588999999999999


Q ss_pred             ccCCCCCCC-----HHHHhcCCCCCCC
Q 013973          408 RYDPTDRLT-----AREALRHPFFTRD  429 (433)
Q Consensus       408 ~~dP~~R~t-----a~ell~hp~f~~~  429 (433)
                      .+||.+|+.     |.|+.+|+||..-
T Consensus       404 ~kdP~kRLGgGpdDakEi~~h~FF~~v  430 (516)
T KOG0690|consen  404 KKDPKKRLGGGPDDAKEIMRHRFFASV  430 (516)
T ss_pred             hcChHhhcCCCchhHHHHHhhhhhccC
Confidence            999999994     8999999999864

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=9.5e-47  Score=373.45  Aligned_cols=280  Identities=24%  Similarity=0.368  Sum_probs=209.6

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      .|++++.||+|+||+||+|++..+++.||||+++...    .....+..|+.+++.+     .|++|+++++.+.+.+++
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l-----~h~~iv~l~~~~~~~~~~   76 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEA-----DNEWVVKLYYSFQDKDNL   76 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhc-----CCCCeeeeEEEEecCCEE
Confidence            5899999999999999999999999999999997432    2234566788888887     678999999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      |+||||+ ||+|.+++....  .+++..++.++.||+.||+|||+.|||||||||+|||++.+++++|+|||++......
T Consensus        77 ~lv~E~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~  154 (381)
T cd05626          77 YFVMDYIPGGDMMSLLIRME--VFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT  154 (381)
T ss_pred             EEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence            9999999 999999998754  7999999999999999999999999999999999999999999999999987533211


Q ss_pred             Cc--cccc------CCCC-----CCEEEEecCCc-------ccc---CCCCCceeecCcccchhhhhCCCCCCcchhHHH
Q 013973          253 SS--YFKR------MPKS-----SAIKVIDFGST-------TYE---RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSV  309 (433)
Q Consensus       253 ~~--~~~~------~~~~-----~~~kl~Dfg~a-------~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSl  309 (433)
                      ..  ....      ....     .....+.++..       ...   .......+||+.|+|||++.+..++.++|||||
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl  234 (381)
T cd05626         155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSV  234 (381)
T ss_pred             cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeeh
Confidence            00  0000      0000     00000111100       000   001123579999999999999899999999999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHh
Q 013973          310 GCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM  389 (433)
Q Consensus       310 Gv~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (433)
                      ||++|||++|..||...+..+....+.....                     .+..|.                      
T Consensus       235 G~il~elltG~~Pf~~~~~~~~~~~i~~~~~---------------------~~~~~~----------------------  271 (381)
T cd05626         235 GVILFEMLVGQPPFLAPTPTETQLKVINWEN---------------------TLHIPP----------------------  271 (381)
T ss_pred             hhHHHHHHhCCCCCcCCCHHHHHHHHHcccc---------------------ccCCCC----------------------
Confidence            9999999999999987665443332221100                     011111                      


Q ss_pred             hhcCCchhHHHHHHHhccc--cCCCCCCCHHHHhcCCCCCCC
Q 013973          390 QHVDHSAGDLTHLLQGLLR--YDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       390 ~~~~~~~~~~~~li~~~L~--~dP~~R~ta~ell~hp~f~~~  429 (433)
                        ...+++++.+||.+||.  .+|..|+++.|+++||||++.
T Consensus       272 --~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~  311 (381)
T cd05626         272 --QVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV  311 (381)
T ss_pred             --CCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence              12467789999999664  455569999999999999863

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=1e-46  Score=365.24  Aligned_cols=250  Identities=25%  Similarity=0.375  Sum_probs=203.0

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      +|++++.||+|+||.||+|.+..+++.||+|+++...    ...+....|..++..+.    ++++++.+++.+...+.+
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~----~~~~i~~~~~~~~~~~~~   76 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPG----KPPFLTQLHSCFQTMDRL   76 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcC----CCCceeeeEEEEEcCCEE
Confidence            4899999999999999999999999999999997432    22344556777766652    445688999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      |+||||+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.                  
T Consensus        77 ~lv~E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~------------------  136 (324)
T cd05587          77 YFVMEYVNGGDLMYHIQQVG--KFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDA------------------  136 (324)
T ss_pred             EEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcC------------------
Confidence            9999999 899999997754  6899999999999999999999999999999999999954                  


Q ss_pred             CcccccCCCCCCEEEEecCCccccC---CCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChH
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYER---PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  329 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~  329 (433)
                               ++.+||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..
T Consensus       137 ---------~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~  207 (324)
T cd05587         137 ---------EGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED  207 (324)
T ss_pred             ---------CCCEEEeecCcceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH
Confidence                     4456777777654321   1123357999999999999999999999999999999999999999877665


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +.+..+...                       ...                          .+...+.++.+||.+||++
T Consensus       208 ~~~~~i~~~-----------------------~~~--------------------------~~~~~~~~~~~li~~~l~~  238 (324)
T cd05587         208 ELFQSIMEH-----------------------NVS--------------------------YPKSLSKEAVSICKGLLTK  238 (324)
T ss_pred             HHHHHHHcC-----------------------CCC--------------------------CCCCCCHHHHHHHHHHhhc
Confidence            544333211                       111                          1234567899999999999


Q ss_pred             CCCCCCCH-----HHHhcCCCCCCC
Q 013973          410 DPTDRLTA-----REALRHPFFTRD  429 (433)
Q Consensus       410 dP~~R~ta-----~ell~hp~f~~~  429 (433)
                      ||.+|+++     .++++||||+..
T Consensus       239 ~P~~R~~~~~~~~~~~~~hp~~~~~  263 (324)
T cd05587         239 HPAKRLGCGPTGERDIREHAFFRRI  263 (324)
T ss_pred             CHHHcCCCCCCCHHHHhcCCCcCCC
Confidence            99999976     899999999864

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=1.7e-46  Score=357.09  Aligned_cols=278  Identities=30%  Similarity=0.537  Sum_probs=212.7

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec-----
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY-----  169 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~-----  169 (433)
                      +|++++.||+|+||.||+|.++.+++.||+|.++...   ........|+.+++.+.+.  +|+||+++++++..     
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~--~h~ni~~~~~~~~~~~~~~   78 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAF--DHPNIVRLMDVCATSRTDR   78 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhc--CCCCeeeeeeeeccccCCC
Confidence            4899999999999999999999999999999986422   1223456688888777542  56899999988754     


Q ss_pred             CCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          170 RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       170 ~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      ...+++||||+.++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.+              
T Consensus        79 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~--------------  144 (288)
T cd07863          79 ETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSG--------------  144 (288)
T ss_pred             CceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC--------------
Confidence            356899999998899999987655569999999999999999999999999999999999999544              


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                                   +.+||+|||++.......  ....||..|+|||++.+..++.++|||||||++|+|++|.+||.+..
T Consensus       145 -------------~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~  211 (288)
T cd07863         145 -------------GQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS  211 (288)
T ss_pred             -------------CCEEECccCccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCC
Confidence                         456666666655433221  23468999999999999899999999999999999999999999888


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ..+.+..+....+......+....            ..+.....          +............++.++.+||.+||
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~li~~~L  269 (288)
T cd07863         212 EADQLGKIFDLIGLPPEDDWPRDV------------TLPRGAFS----------PRGPRPVQSVVPEIEESGAQLLLEML  269 (288)
T ss_pred             HHHHHHHHHHHhCCCChhhCcccc------------cccccccC----------CCCCCchHHhCcCcCHHHHHHHHHHh
Confidence            777777777766654432221100            00000000          00000111223456778999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCC
Q 013973          408 RYDPTDRLTAREALRHPFF  426 (433)
Q Consensus       408 ~~dP~~R~ta~ell~hp~f  426 (433)
                      ++||++|||+.|++.||||
T Consensus       270 ~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         270 TFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             ccCcccCCCHHHHhcCCCC
Confidence            9999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=2.8e-46  Score=359.66  Aligned_cols=282  Identities=26%  Similarity=0.460  Sum_probs=222.7

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ++|.+.+.||+|+||.||+|+++.+++.||+|.++...  ........|+.+++.+     .|+||+++++++..++..|
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~   80 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDL-----KHANIVTLHDIVHTDKSLT   80 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhC-----CCCCcceEEEEEeeCCeEE
Confidence            56999999999999999999999999999999986332  2233456788888888     6789999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          175 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       175 lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      +||||+.++|.+++...+ ..+++..+..++.||+.||.|||++||+||||||+|||++.+                   
T Consensus        81 lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~-------------------  140 (309)
T cd07872          81 LVFEYLDKDLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINER-------------------  140 (309)
T ss_pred             EEEeCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC-------------------
Confidence            999999889999987654 358999999999999999999999999999999999999544                   


Q ss_pred             ccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                              +.+||+|||.+.......   ....+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+
T Consensus       141 --------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~  212 (309)
T cd07872         141 --------GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED  212 (309)
T ss_pred             --------CCEEECccccceecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence                    456666666654322111   22367899999999875 458899999999999999999999999988888


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+...++..+...+..+........    ...+...               ..........++.++.+||.+||+.|
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~---------------~~~~~~~~~~~~~~~~~li~~~L~~d  273 (309)
T cd07872         213 ELHLIFRLLGTPTEETWPGISSNDEFKN----YNFPKYK---------------PQPLINHAPRLDTEGIELLTKFLQYE  273 (309)
T ss_pred             HHHHHHHHhCCCCHHHHhhhcchhhhhh----hhcCccC---------------CCchhhhccCCCHHHHHHHHHhccCC
Confidence            8888999888888777665433221110    0000000               00001122356788999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCCC
Q 013973          411 PTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       411 P~~R~ta~ell~hp~f~~~~  430 (433)
                      |.+|||+.|+|+||||+..+
T Consensus       274 p~~R~t~~e~l~h~~~~~~~  293 (309)
T cd07872         274 SKKRISAEEAMKHAYFRSLG  293 (309)
T ss_pred             hhhCCCHHHHhcChhhhhcc
Confidence            99999999999999998754

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=2.3e-46  Score=367.34  Aligned_cols=290  Identities=27%  Similarity=0.442  Sum_probs=223.8

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC-
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR-  170 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~-  170 (433)
                      +.++|++.+.||+|+||.||+|.+..+++.||+|++...   .........|+.+++.+     .|+||+++++.+... 
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~   89 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-----NHKNIISLLNVFTPQK   89 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHh-----CCCchhceeeeeeccc
Confidence            467899999999999999999999999999999998642   23345566788888888     678999999887543 


Q ss_pred             -----CeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcC
Q 013973          171 -----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  245 (433)
Q Consensus       171 -----~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~  245 (433)
                           ..+|+||||+.++|.+.+..    .+++..+..++.|++.||.|||++||+||||||+|||++.           
T Consensus        90 ~~~~~~~~~lv~e~~~~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~-----------  154 (355)
T cd07874          90 SLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS-----------  154 (355)
T ss_pred             cccccceeEEEhhhhcccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECC-----------
Confidence                 45799999998888888754    5889999999999999999999999999999999999954           


Q ss_pred             CCCCCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 013973          246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF  323 (433)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf  323 (433)
                                      ++.+||+|||+++......  ....||..|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       155 ----------------~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf  218 (355)
T cd07874         155 ----------------DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF  218 (355)
T ss_pred             ----------------CCCEEEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence                            4557777777765443321  2347899999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      .+.+..+.+..+...++....+...........++..... +...... .....     .............+.++++||
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~li  291 (355)
T cd07874         219 PGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK-YAGLTFP-KLFPD-----SLFPADSEHNKLKASQARDLL  291 (355)
T ss_pred             CCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCc-cccccch-hhccc-----cccccccccccccchHHHHHH
Confidence            9988888888888888887777777666555555433210 0000000 00000     000000111223456789999


Q ss_pred             HhccccCCCCCCCHHHHhcCCCCC
Q 013973          404 QGLLRYDPTDRLTAREALRHPFFT  427 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~hp~f~  427 (433)
                      .+||+.||++|||+.|+|+||||.
T Consensus       292 ~~mL~~dP~~Rps~~ell~hp~~~  315 (355)
T cd07874         292 SKMLVIDPAKRISVDEALQHPYIN  315 (355)
T ss_pred             HHHhcCCchhcCCHHHHhcCcchh
Confidence            999999999999999999999996

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.2e-47  Score=364.32  Aligned_cols=242  Identities=31%  Similarity=0.508  Sum_probs=200.0

Q ss_pred             eeccccEEEEEEEECCCCeEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecC
Q 013973          105 MGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  180 (433)
Q Consensus       105 iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~  180 (433)
                      ||+|+||.||+|.+..+++.||+|+++..    ......+..|+.+++++     +|++|+++++.+...+.+|+||||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~   75 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQV-----NCPFIVPLKFSFQSPEKLYLVLAFI   75 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-----CCCcEeceeeEEecCCeEEEEEcCC
Confidence            79999999999999999999999998742    22334456788888877     6789999999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccC
Q 013973          181 -GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM  259 (433)
Q Consensus       181 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~  259 (433)
                       +++|.+++...+  .+++..+..++.||+.||.|||++||+||||||+|||++                          
T Consensus        76 ~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~--------------------------  127 (312)
T cd05585          76 NGGELFHHLQREG--RFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLD--------------------------  127 (312)
T ss_pred             CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEEC--------------------------
Confidence             999999998754  799999999999999999999999999999999999994                          


Q ss_pred             CCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 013973          260 PKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME  336 (433)
Q Consensus       260 ~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~i~  336 (433)
                       .++.+||+|||++......   ....+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+.+..+.
T Consensus       128 -~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~  206 (312)
T cd05585         128 -YQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKIL  206 (312)
T ss_pred             -CCCcEEEEECcccccCccCCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHH
Confidence             4456777777776543211   233579999999999999999999999999999999999999998766544333221


Q ss_pred             HHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCC-
Q 013973          337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL-  415 (433)
Q Consensus       337 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-  415 (433)
                      .                       +...                          .+..++.++.+||.+||+.||.+|| 
T Consensus       207 ~-----------------------~~~~--------------------------~~~~~~~~~~~li~~~L~~dp~~R~~  237 (312)
T cd05585         207 Q-----------------------EPLR--------------------------FPDGFDRDAKDLLIGLLSRDPTRRLG  237 (312)
T ss_pred             c-----------------------CCCC--------------------------CCCcCCHHHHHHHHHHcCCCHHHcCC
Confidence            1                       1111                          1235677899999999999999997 


Q ss_pred             --CHHHHhcCCCCCCC
Q 013973          416 --TAREALRHPFFTRD  429 (433)
Q Consensus       416 --ta~ell~hp~f~~~  429 (433)
                        ++.|++.||||++.
T Consensus       238 ~~~~~e~l~hp~~~~~  253 (312)
T cd05585         238 YNGAQEIKNHPFFSQL  253 (312)
T ss_pred             CCCHHHHHcCCCcCCC
Confidence              58999999999874

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-49  Score=371.51  Aligned_cols=251  Identities=27%  Similarity=0.411  Sum_probs=211.3

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeec--chhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      .|..++.||+|+||.||+|.+..+++.||+|++.-  .+...+....|+.+|.++     .+++|.+.|+.|..+..+++
T Consensus        14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~-----~~~~it~yygsyl~g~~Lwi   88 (467)
T KOG0201|consen   14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQC-----DSPNITEYYGSYLKGTKLWI   88 (467)
T ss_pred             ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhc-----CcchHHhhhhheeecccHHH
Confidence            47888999999999999999999999999999973  334456677899999988     55889999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      +|||| ||++.+.|+..+  .+.+..+..++.+++.||.|||.++.+|||||+.|||+..                    
T Consensus        89 iMey~~gGsv~~lL~~~~--~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~--------------------  146 (467)
T KOG0201|consen   89 IMEYCGGGSVLDLLKSGN--ILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSE--------------------  146 (467)
T ss_pred             HHHHhcCcchhhhhccCC--CCccceeeeehHHHHHHhhhhhhcceecccccccceeEec--------------------
Confidence            99999 999999998764  5689999999999999999999999999999999999954                    


Q ss_pred             ccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                             .+.+||+|||.+......   ..+++||+.|||||++.+..|+.++||||||++.+||++|.+||.....+..
T Consensus       147 -------~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv  219 (467)
T KOG0201|consen  147 -------SGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV  219 (467)
T ss_pred             -------cCcEEEEecceeeeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE
Confidence                   456777777776554432   2567999999999999999999999999999999999999999987665433


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      +..|-+                                                +........+++.+++||..||++||
T Consensus       220 lflIpk------------------------------------------------~~PP~L~~~~S~~~kEFV~~CL~k~P  251 (467)
T KOG0201|consen  220 LFLIPK------------------------------------------------SAPPRLDGDFSPPFKEFVEACLDKNP  251 (467)
T ss_pred             EEeccC------------------------------------------------CCCCccccccCHHHHHHHHHHhhcCc
Confidence            222111                                                00111223678899999999999999


Q ss_pred             CCCCCHHHHhcCCCCCCCC
Q 013973          412 TDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       412 ~~R~ta~ell~hp~f~~~~  430 (433)
                      +.||+|.++|+|+|++...
T Consensus       252 ~~RpsA~~LLKh~FIk~a~  270 (467)
T KOG0201|consen  252 EFRPSAKELLKHKFIKRAK  270 (467)
T ss_pred             ccCcCHHHHhhhHHHHhcC
Confidence            9999999999999998743

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=1.5e-46  Score=363.81  Aligned_cols=250  Identities=25%  Similarity=0.354  Sum_probs=201.5

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh----hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      +|++++.||+|+||.||+|++..+++.||+|++++...    .......|..++..+    .+|++++.+++++...+.+
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~----~~~~~i~~~~~~~~~~~~~   76 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALS----GKPPFLTQLHSCFQTMDRL   76 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhc----cCCCeEeeEEEEEecCCEE
Confidence            48899999999999999999999999999999974321    122334455555544    3567899999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      |+||||+ +|+|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.+                 
T Consensus        77 ~lv~E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~-----------------  137 (323)
T cd05616          77 YFVMEYVNGGDLMYQIQQVG--RFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSE-----------------  137 (323)
T ss_pred             EEEEcCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCC-----------------
Confidence            9999999 899999987654  69999999999999999999999999999999999999544                 


Q ss_pred             CcccccCCCCCCEEEEecCCccccCC---CCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChH
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  329 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~  329 (433)
                                +.+||+|||++.....   .....+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..
T Consensus       138 ----------~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~  207 (323)
T cd05616         138 ----------GHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED  207 (323)
T ss_pred             ----------CcEEEccCCCceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH
Confidence                      4566666666543221   122357999999999999999999999999999999999999999887665


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +....+...                       ...                          .+...+.++.+|+.+||++
T Consensus       208 ~~~~~i~~~-----------------------~~~--------------------------~p~~~s~~~~~li~~~l~~  238 (323)
T cd05616         208 ELFQSIMEH-----------------------NVA--------------------------YPKSMSKEAVAICKGLMTK  238 (323)
T ss_pred             HHHHHHHhC-----------------------CCC--------------------------CCCcCCHHHHHHHHHHccc
Confidence            554433221                       111                          1234567899999999999


Q ss_pred             CCCCCCC-----HHHHhcCCCCCCC
Q 013973          410 DPTDRLT-----AREALRHPFFTRD  429 (433)
Q Consensus       410 dP~~R~t-----a~ell~hp~f~~~  429 (433)
                      ||++|++     ..++++||||+..
T Consensus       239 ~p~~R~~~~~~~~~~i~~h~~~~~~  263 (323)
T cd05616         239 HPGKRLGCGPEGERDIKEHAFFRYI  263 (323)
T ss_pred             CHHhcCCCCCCCHHHHhcCCCcCCC
Confidence            9999997     4899999999754

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.8e-47  Score=373.25  Aligned_cols=278  Identities=24%  Similarity=0.383  Sum_probs=210.1

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|.+++.||+|+||.||+|.++.+++.||||++....    .....+..|+.+++.+     +|++|+++++++.+..+
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-----~hp~iv~~~~~~~~~~~   75 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAES-----DSPWVVSLYYSFQDAQY   75 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhC-----CCCCcceEEEEEEcCCe
Confidence            35999999999999999999999999999999986432    2234456788888776     67899999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +|+||||+ |++|.+++....  .+++..++.++.|++.||+|||+.|||||||||+|||++.++.++|+|||++.....
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~  153 (377)
T cd05629          76 LYLIMEFLPGGDLMTMLIKYD--TFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHK  153 (377)
T ss_pred             eEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccccc
Confidence            99999999 999999997654  799999999999999999999999999999999999999999999999998853211


Q ss_pred             C--CcccccC----------CCCC-------------CEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchh
Q 013973          252 D--SSYFKRM----------PKSS-------------AIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDI  306 (433)
Q Consensus       252 ~--~~~~~~~----------~~~~-------------~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv  306 (433)
                      .  ...+...          +...             ..++.+++.....  .....+||+.|+|||++.+..++.++||
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di  231 (377)
T cd05629         154 QHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRL--MAYSTVGTPDYIAPEIFLQQGYGQECDW  231 (377)
T ss_pred             ccccccccccccccccccccccccccccccccccccchhhhhhhhhcccc--cccccCCCccccCHHHHccCCCCCceee
Confidence            0  0000000          0000             0011111111100  0112479999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHH
Q 013973          307 WSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN  386 (433)
Q Consensus       307 wSlGv~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  386 (433)
                      |||||++|||++|.+||.+.+..+.+..+....                     ..+.+|.                   
T Consensus       232 wSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~---------------------~~~~~p~-------------------  271 (377)
T cd05629         232 WSLGAIMFECLIGWPPFCSENSHETYRKIINWR---------------------ETLYFPD-------------------  271 (377)
T ss_pred             EecchhhhhhhcCCCCCCCCCHHHHHHHHHccC---------------------CccCCCC-------------------
Confidence            999999999999999998766655444332110                     0011111                   


Q ss_pred             HHhhhcCCchhHHHHHHHhccccCCCCC---CCHHHHhcCCCCCCC
Q 013973          387 LIMQHVDHSAGDLTHLLQGLLRYDPTDR---LTAREALRHPFFTRD  429 (433)
Q Consensus       387 ~~~~~~~~~~~~~~~li~~~L~~dP~~R---~ta~ell~hp~f~~~  429 (433)
                           ...++.++.+||.+||+ +|.+|   +++.|+++||||+..
T Consensus       272 -----~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~  311 (377)
T cd05629         272 -----DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGV  311 (377)
T ss_pred             -----CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence                 12456789999999998 77776   599999999999853

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=1.1e-46  Score=373.31  Aligned_cols=278  Identities=27%  Similarity=0.423  Sum_probs=210.6

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      +|++++.||+|+||.||+|++..+++.||+|++....    .....+..|+.+++++     +|++|+++++.+.+.+.+
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~-----~h~~iv~~~~~~~~~~~~   76 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEA-----DNEWVVRLYYSFQDKDNL   76 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhC-----CCCcCCeEEEEEEeCCEE
Confidence            5899999999999999999999999999999987432    2234566788888887     678999999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      |+||||+ +|+|.+++...+  .+++..++.++.||+.||+|||++|||||||||+|||++.+|.++|+|||++......
T Consensus        77 ~lv~E~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~  154 (382)
T cd05625          77 YFVMDYIPGGDMMSLLIRMG--IFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT  154 (382)
T ss_pred             EEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcccccc
Confidence            9999999 899999997754  7899999999999999999999999999999999999999999999999987533211


Q ss_pred             Cc--ccccCCCCCCEEEEecCC---------------------ccc-cCCCCCceeecCcccchhhhhCCCCCCcchhHH
Q 013973          253 SS--YFKRMPKSSAIKVIDFGS---------------------TTY-ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWS  308 (433)
Q Consensus       253 ~~--~~~~~~~~~~~kl~Dfg~---------------------a~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS  308 (433)
                      ..  .... .........+|..                     ... ........+||+.|+|||++.+..|+.++||||
T Consensus       155 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwS  233 (382)
T cd05625         155 HDSKYYQS-GDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWS  233 (382)
T ss_pred             cccccccc-ccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEe
Confidence            00  0000 0000000000000                     000 000112357999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHH
Q 013973          309 VGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI  388 (433)
Q Consensus       309 lGv~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (433)
                      |||++|||++|.+||.+.+..+....+.....                     .+..|.                     
T Consensus       234 lGvil~elltG~~Pf~~~~~~~~~~~i~~~~~---------------------~~~~p~---------------------  271 (382)
T cd05625         234 VGVILYEMLVGQPPFLAQTPLETQMKVINWQT---------------------SLHIPP---------------------  271 (382)
T ss_pred             chHHHHHHHhCCCCCCCCCHHHHHHHHHccCC---------------------CcCCCC---------------------
Confidence            99999999999999987766544333221100                     000110                     


Q ss_pred             hhhcCCchhHHHHHHHhccccCCCCCCC---HHHHhcCCCCCCC
Q 013973          389 MQHVDHSAGDLTHLLQGLLRYDPTDRLT---AREALRHPFFTRD  429 (433)
Q Consensus       389 ~~~~~~~~~~~~~li~~~L~~dP~~R~t---a~ell~hp~f~~~  429 (433)
                         ...+++++.+||.+|+ .||.+|++   +.|+++||||+..
T Consensus       272 ---~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~  311 (382)
T cd05625         272 ---QAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTI  311 (382)
T ss_pred             ---cccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCc
Confidence               1245778999999976 59999997   9999999999764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.8e-46  Score=366.40  Aligned_cols=281  Identities=27%  Similarity=0.507  Sum_probs=221.2

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC-
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR-  170 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~-  170 (433)
                      +.++|++++.||+|+||.||+|.+..+++.||+|++....   .....+..|+.+++.+     .|+||+++++++... 
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~   87 (343)
T cd07878          13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHM-----KHENVIGLLDVFTPAT   87 (343)
T ss_pred             hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhc-----CCCchhhhhhhhcccc
Confidence            4578999999999999999999999999999999986422   2234456789999888     678899999887543 


Q ss_pred             -----CeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcC
Q 013973          171 -----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  245 (433)
Q Consensus       171 -----~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~  245 (433)
                           ...|++|++++++|.+++...   .+++..+..++.||+.||.|||++||+||||||+|||++.           
T Consensus        88 ~~~~~~~~~~~~~~~~~~l~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~-----------  153 (343)
T cd07878          88 SIENFNEVYLVTNLMGADLNNIVKCQ---KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNE-----------  153 (343)
T ss_pred             cccccCcEEEEeecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECC-----------
Confidence                 457999999999999887643   6999999999999999999999999999999999999954           


Q ss_pred             CCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCC
Q 013973          246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                                      ++.+||+|||++..........+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.
T Consensus       154 ----------------~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~  217 (343)
T cd07878         154 ----------------DCELRILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFP  217 (343)
T ss_pred             ----------------CCCEEEcCCccceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCC
Confidence                            455677777776655444445679999999999987 568999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCCHHHHHHHhhhhh-hhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          325 THENLEHLAMMERVLGPLPQHMLKRVDRHAE-KYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       325 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      +.+..+.+..+....+..+.+....+..... .++.. ....+.              .    .........++.+.+||
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--------------~----~~~~~~~~~~~~~~~li  278 (343)
T cd07878         218 GNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQS-LPHMPQ--------------Q----DLKKIFRGANPLAIDLL  278 (343)
T ss_pred             CCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhc-cccccc--------------h----hHHHhccCCCHHHHHHH
Confidence            8888888888888888877766655432221 11110 000000              0    00111234566789999


Q ss_pred             HhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          404 QGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      .+||+.||.+|||+.|+|+||||...
T Consensus       279 ~~mL~~dp~~R~s~~ell~hp~~~~~  304 (343)
T cd07878         279 EKMLVLDSDKRISASEALAHPYFSQY  304 (343)
T ss_pred             HHHcCCChhhCCCHHHHhcCcchhcc
Confidence            99999999999999999999999753

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=8.9e-47  Score=366.15  Aligned_cols=244  Identities=26%  Similarity=0.451  Sum_probs=199.9

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEe
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  178 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e  178 (433)
                      +.||+|+||.||+|.+..+++.||+|++....    ........|+.+++.+     .|++|+.+.+.+...+.+|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~~~~lv~E   75 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNT-----RHPFLTSLKYSFQTKDRLCFVME   75 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-----CCCCCcceEEEEEcCCEEEEEEe
Confidence            46999999999999999999999999997432    2234556788888777     67899999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccc
Q 013973          179 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  257 (433)
Q Consensus       179 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~  257 (433)
                      |+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.                       
T Consensus        76 y~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~-----------------------  130 (328)
T cd05593          76 YVNGGELFFHLSRER--VFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDK-----------------------  130 (328)
T ss_pred             CCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECC-----------------------
Confidence            99 899999987654  7999999999999999999999999999999999999954                       


Q ss_pred             cCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 013973          258 RMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  334 (433)
Q Consensus       258 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~  334 (433)
                          ++.+||+|||++......   ....+||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....
T Consensus       131 ----~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~  206 (328)
T cd05593         131 ----DGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL  206 (328)
T ss_pred             ----CCcEEEecCcCCccCCCcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHH
Confidence                455677777766532211   1235799999999999999999999999999999999999999987665443332


Q ss_pred             HHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCC
Q 013973          335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  414 (433)
Q Consensus       335 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  414 (433)
                      +..                       +..                          ..+..++.++.+||.+||++||++|
T Consensus       207 ~~~-----------------------~~~--------------------------~~p~~~~~~~~~li~~~L~~dP~~R  237 (328)
T cd05593         207 ILM-----------------------EDI--------------------------KFPRTLSADAKSLLSGLLIKDPNKR  237 (328)
T ss_pred             hcc-----------------------CCc--------------------------cCCCCCCHHHHHHHHHHcCCCHHHc
Confidence            110                       111                          1123567789999999999999999


Q ss_pred             C-----CHHHHhcCCCCCCC
Q 013973          415 L-----TAREALRHPFFTRD  429 (433)
Q Consensus       415 ~-----ta~ell~hp~f~~~  429 (433)
                      +     ++.|+++||||...
T Consensus       238 ~~~~~~~~~~il~h~~~~~~  257 (328)
T cd05593         238 LGGGPDDAKEIMRHSFFTGV  257 (328)
T ss_pred             CCCCCCCHHHHhcCCCcCCC
Confidence            7     89999999999764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=1.9e-46  Score=367.67  Aligned_cols=252  Identities=27%  Similarity=0.423  Sum_probs=196.2

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ++|+++++||+|+||.||+|.+..+++.||||++...  ......+..|+++++.+     .|+||+++++++...+.+|
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~  148 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDV-----NHPNVVKCHDMFDHNGEIQ  148 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhC-----CCCCcceeeeEeccCCeEE
Confidence            4688999999999999999999999999999998643  23445677899999888     6789999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +||||+ +++|.+.      ..+++..+..++.||+.||+|||++|||||||||+|||++.+                  
T Consensus       149 lv~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~------------------  204 (353)
T PLN00034        149 VLLEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSA------------------  204 (353)
T ss_pred             EEEecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCC------------------
Confidence            999999 8887542      246778888999999999999999999999999999999544                  


Q ss_pred             cccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhC-----CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILG-----LGWTYPCDIWSVGCILVELCTGEALFQT  325 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~elltg~~Pf~~  325 (433)
                               +.+||+|||++......   ....+||..|+|||++..     ...+.++|||||||++|||++|+.||..
T Consensus       205 ---------~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~  275 (353)
T PLN00034        205 ---------KNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGV  275 (353)
T ss_pred             ---------CCEEEcccccceecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence                     45666666665543221   123479999999998853     2345789999999999999999999974


Q ss_pred             CChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHh
Q 013973          326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  405 (433)
Q Consensus       326 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  405 (433)
                      ....+....+.......                                             ....+..++.++++||.+
T Consensus       276 ~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~l~~li~~  310 (353)
T PLN00034        276 GRQGDWASLMCAICMSQ---------------------------------------------PPEAPATASREFRHFISC  310 (353)
T ss_pred             CCCccHHHHHHHHhccC---------------------------------------------CCCCCCccCHHHHHHHHH
Confidence            33222211111110000                                             001123557789999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCCCC
Q 013973          406 LLRYDPTDRLTAREALRHPFFTRDHL  431 (433)
Q Consensus       406 ~L~~dP~~R~ta~ell~hp~f~~~~~  431 (433)
                      ||+.||++|||+.|+|+||||.....
T Consensus       311 ~l~~~P~~Rpt~~ell~hp~~~~~~~  336 (353)
T PLN00034        311 CLQREPAKRWSAMQLLQHPFILRAQP  336 (353)
T ss_pred             HccCChhhCcCHHHHhcCcccccCCc
Confidence            99999999999999999999987743

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-47  Score=342.77  Aligned_cols=264  Identities=27%  Similarity=0.491  Sum_probs=218.6

Q ss_pred             eecCcEEEE-eeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec---
Q 013973           94 NLTSRYKIH-SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY---  169 (433)
Q Consensus        94 ~~~~~~~~~-~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~---  169 (433)
                      .++++|.+. .+||-|-.|.|..|+++.|++.+|+|++....    .+.+|+++--..    ..|+|||.+++.|+.   
T Consensus        58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~----KARrEVeLHw~~----s~h~~iV~IidVyeNs~~  129 (400)
T KOG0604|consen   58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSP----KARREVELHWMA----SGHPHIVSIIDVYENSYQ  129 (400)
T ss_pred             cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCH----HHHhHhhhhhhh----cCCCceEEeehhhhhhcc
Confidence            456778776 57999999999999999999999999986433    345566554333    367899999998764   


Q ss_pred             -CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC
Q 013973          170 -RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       170 -~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                       ...+.+|||+| ||.|+..++..+...|++.++..|+.||..|+.|||+.+|.||||||+|+|.+..            
T Consensus       130 ~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t------------  197 (400)
T KOG0604|consen  130 GRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTT------------  197 (400)
T ss_pred             CceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecC------------
Confidence             56789999999 9999999999998899999999999999999999999999999999999999643            


Q ss_pred             CCCCCCcccccCCCCCCEEEEecCCccccCC--CCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 013973          248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERP--DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  325 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~  325 (433)
                                  ..+..+||+|||+|+....  .-.+.|-|+.|.|||++-.++|+..+|+||+||++|-|++|.+||..
T Consensus       198 ------------~~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS  265 (400)
T KOG0604|consen  198 ------------SPNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS  265 (400)
T ss_pred             ------------CCCcceEecccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccc
Confidence                        3566799999999986542  22456889999999999999999999999999999999999999976


Q ss_pred             CChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHh
Q 013973          326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  405 (433)
Q Consensus       326 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  405 (433)
                      ....           ..++.        ++..|..|.+.+|+..                      |+..|.+++|+|++
T Consensus       266 ~hg~-----------aispg--------Mk~rI~~gqy~FP~pE----------------------Ws~VSe~aKdlIR~  304 (400)
T KOG0604|consen  266 NHGL-----------AISPG--------MKRRIRTGQYEFPEPE----------------------WSCVSEAAKDLIRK  304 (400)
T ss_pred             cCCc-----------cCChh--------HHhHhhccCccCCChh----------------------HhHHHHHHHHHHHH
Confidence            4331           12222        2334667777777633                      45678899999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          406 LLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       406 ~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      +|..+|++|+|++|++.|||+.+..
T Consensus       305 LLkt~PteRlTI~~~m~hpwi~~~~  329 (400)
T KOG0604|consen  305 LLKTEPTERLTIEEVMDHPWINQYE  329 (400)
T ss_pred             HhcCCchhheeHHHhhcCchhcccc
Confidence            9999999999999999999998653

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=5.8e-46  Score=365.71  Aligned_cols=291  Identities=27%  Similarity=0.433  Sum_probs=224.4

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC-
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR-  170 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~-  170 (433)
                      +.++|++.+.||+|+||.||+|++..+++.||||++...   .........|+.+++.+     +|+||+.+++.+... 
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~ii~~~~~~~~~~   96 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-----NHKNIIGLLNVFTPQK   96 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhc-----CCCCccccceeecccc
Confidence            457899999999999999999999999999999998642   23344566788888877     678899998877543 


Q ss_pred             -----CeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcC
Q 013973          171 -----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  245 (433)
Q Consensus       171 -----~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~  245 (433)
                           ..+|+||||++++|.+++..    .+++..+..++.|++.||.|||++||+||||||+|||++            
T Consensus        97 ~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~------------  160 (364)
T cd07875          97 SLEEFQDVYIVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK------------  160 (364)
T ss_pred             cccccCeEEEEEeCCCCCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEEC------------
Confidence                 46899999998899888854    488999999999999999999999999999999999994            


Q ss_pred             CCCCCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 013973          246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF  323 (433)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf  323 (433)
                                     .++.+||+|||++.......  ....||..|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       161 ---------------~~~~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf  225 (364)
T cd07875         161 ---------------SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF  225 (364)
T ss_pred             ---------------CCCcEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCC
Confidence                           44567777777776443321  2347899999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      .+.+..+.+..+...++..+++...........+....... ..  ...+.+......    ..........+.++++||
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~----~~~~~~~~~~~~~~~dll  298 (364)
T cd07875         226 PGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKY-AG--YSFEKLFPDVLF----PADSEHNKLKASQARDLL  298 (364)
T ss_pred             CCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCc-CC--CChHhhCccccc----cccccccccccHHHHHHH
Confidence            99998888888888888888777776665554444321100 00  000000000000    000111123456789999


Q ss_pred             HhccccCCCCCCCHHHHhcCCCCCC
Q 013973          404 QGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      .+||+.||.+|||+.|+|+||||..
T Consensus       299 ~~mL~~dP~~R~t~~e~L~hp~~~~  323 (364)
T cd07875         299 SKMLVIDASKRISVDEALQHPYINV  323 (364)
T ss_pred             HHhcCcCcccCCCHHHHhcCccccc
Confidence            9999999999999999999999964

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.8e-47  Score=369.42  Aligned_cols=280  Identities=26%  Similarity=0.404  Sum_probs=211.7

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++.+.||+|+||.||+|.+..+++.||||+++...    .....+..|+.++..+     +|++|+++++.+.+.++
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~~~   75 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADA-----DSPWIVKLYYSFQDEEH   75 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhc-----CCCCccchhhheecCCe
Confidence            36999999999999999999999999999999997432    2334566788888877     67899999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +|+||||+ +++|.+++...+  .+++..++.++.||+.||+|||+.||+||||||+|||++.++.++|+|||++.....
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~  153 (350)
T cd05573          76 LYLVMEYMPGGDLMNLLIRKD--VFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNK  153 (350)
T ss_pred             EEEEEcCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence            99999999 899999998763  799999999999999999999999999999999999998888888888877654433


Q ss_pred             CCcccccCCCCCC-EEEEec----CCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          252 DSSYFKRMPKSSA-IKVIDF----GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       252 ~~~~~~~~~~~~~-~kl~Df----g~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                      ............. ......    ..............||+.|+|||++.+..++.++|||||||++|||++|..||...
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~  233 (350)
T cd05573         154 AKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD  233 (350)
T ss_pred             cCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCC
Confidence            2211000000000 000000    00000000112347999999999999999999999999999999999999999887


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      +..+....+.....                     .+..|.                        ...+++++.+||.+|
T Consensus       234 ~~~~~~~~i~~~~~---------------------~~~~p~------------------------~~~~~~~~~~li~~l  268 (350)
T cd05573         234 TLQETYNKIINWKE---------------------SLRFPP------------------------DPPVSPEAIDLICRL  268 (350)
T ss_pred             CHHHHHHHHhccCC---------------------cccCCC------------------------CCCCCHHHHHHHHHH
Confidence            65544433322100                     001111                        112577899999999


Q ss_pred             cccCCCCCCC-HHHHhcCCCCCCC
Q 013973          407 LRYDPTDRLT-AREALRHPFFTRD  429 (433)
Q Consensus       407 L~~dP~~R~t-a~ell~hp~f~~~  429 (433)
                      |+ ||.+|++ +.|+++||||+..
T Consensus       269 l~-dp~~R~~s~~~ll~hp~~~~~  291 (350)
T cd05573         269 LC-DPEDRLGSFEEIKSHPFFKGI  291 (350)
T ss_pred             cc-ChhhcCCCHHHHhcCCCcCCC
Confidence            98 9999999 9999999999864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=1.6e-46  Score=363.10  Aligned_cols=245  Identities=25%  Similarity=0.391  Sum_probs=198.8

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEe
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  178 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e  178 (433)
                      +.||+|+||.||+|+++.+++.||+|+++...    ........|..++..+    ..|++|+++++.+...+.+|+|||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~----~~h~~iv~~~~~~~~~~~~~iv~E   76 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLA----RNHPFLTQLYCCFQTPDRLFFVME   76 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhc----cCCCchhceeeEEEcCCEEEEEEc
Confidence            46999999999999999999999999987432    2233445566666554    257889999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccc
Q 013973          179 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  257 (433)
Q Consensus       179 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~  257 (433)
                      |+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.                       
T Consensus        77 y~~~g~L~~~i~~~~--~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~-----------------------  131 (320)
T cd05590          77 FVNGGDLMFHIQKSR--RFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDH-----------------------  131 (320)
T ss_pred             CCCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECC-----------------------
Confidence            99 899999987754  7999999999999999999999999999999999999954                       


Q ss_pred             cCCCCCCEEEEecCCccccCC---CCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 013973          258 RMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  334 (433)
Q Consensus       258 ~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~  334 (433)
                          ++.+||+|||++.....   .....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..
T Consensus       132 ----~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~  207 (320)
T cd05590         132 ----EGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEA  207 (320)
T ss_pred             ----CCcEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHH
Confidence                44566666666543211   12335799999999999999999999999999999999999999988776554443


Q ss_pred             HHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCC
Q 013973          335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  414 (433)
Q Consensus       335 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  414 (433)
                      +..                       +...                          .+...+.++.+||.+||+.||++|
T Consensus       208 i~~-----------------------~~~~--------------------------~~~~~~~~~~~li~~~L~~dP~~R  238 (320)
T cd05590         208 ILN-----------------------DEVV--------------------------YPTWLSQDAVDILKAFMTKNPTMR  238 (320)
T ss_pred             Hhc-----------------------CCCC--------------------------CCCCCCHHHHHHHHHHcccCHHHC
Confidence            321                       1111                          122456789999999999999999


Q ss_pred             CCH------HHHhcCCCCCCC
Q 013973          415 LTA------REALRHPFFTRD  429 (433)
Q Consensus       415 ~ta------~ell~hp~f~~~  429 (433)
                      +++      .++++||||+..
T Consensus       239 ~~~~~~~~~~~~~~h~~f~~~  259 (320)
T cd05590         239 LGSLTLGGEEAILRHPFFKEL  259 (320)
T ss_pred             CCCCCCCCHHHHHcCCCcCCC
Confidence            998      999999999753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=1.4e-46  Score=363.98  Aligned_cols=244  Identities=25%  Similarity=0.427  Sum_probs=199.0

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEe
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  178 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e  178 (433)
                      +.||+|+||.||+|.+..+|+.||+|+++...    ........|+.+++.+     .|++|+++++.+...+.+|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~i~~~~~~~~~~~~~~lv~E   75 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-----RHPFLTALKYAFQTHDRLCFVME   75 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-----CCCCCcceeeEEecCCEEEEEEe
Confidence            47999999999999999999999999997432    2233455688888877     67899999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccc
Q 013973          179 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  257 (433)
Q Consensus       179 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~  257 (433)
                      |+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++                     
T Consensus        76 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~---------------------  132 (323)
T cd05595          76 YANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG---------------------  132 (323)
T ss_pred             CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCC---------------------
Confidence            99 899999987654  799999999999999999999999999999999999995544                     


Q ss_pred             cCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 013973          258 RMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  334 (433)
Q Consensus       258 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~  334 (433)
                            .+||+|||++......   .....||+.|+|||++.+..++.++|||||||++|||++|..||...+..+....
T Consensus       133 ------~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~  206 (323)
T cd05595         133 ------HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL  206 (323)
T ss_pred             ------CEEecccHHhccccCCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence                  5566666655432111   1234799999999999999999999999999999999999999987665544333


Q ss_pred             HHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCC
Q 013973          335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  414 (433)
Q Consensus       335 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  414 (433)
                      +..                       ....                          .+..+++++.+||.+||+.||++|
T Consensus       207 ~~~-----------------------~~~~--------------------------~p~~~~~~~~~li~~~L~~dP~~R  237 (323)
T cd05595         207 ILM-----------------------EEIR--------------------------FPRTLSPEAKSLLAGLLKKDPKQR  237 (323)
T ss_pred             Hhc-----------------------CCCC--------------------------CCCCCCHHHHHHHHHHccCCHHHh
Confidence            211                       0001                          123567789999999999999999


Q ss_pred             C-----CHHHHhcCCCCCCC
Q 013973          415 L-----TAREALRHPFFTRD  429 (433)
Q Consensus       415 ~-----ta~ell~hp~f~~~  429 (433)
                      +     ++.++++||||...
T Consensus       238 ~~~~~~~~~~~l~h~~~~~~  257 (323)
T cd05595         238 LGGGPSDAKEVMEHRFFLSI  257 (323)
T ss_pred             CCCCCCCHHHHHcCCCcCCC
Confidence            8     89999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=1.2e-46  Score=372.13  Aligned_cols=279  Identities=25%  Similarity=0.378  Sum_probs=209.7

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++++.||+|+||.||+|++..+++.||+|++....    .....+..|+.++..+     .|++|+++++.+.+++.
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-----~h~~iv~~~~~~~~~~~   75 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEA-----DNEWVVKLYYSFQDKDN   75 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhC-----CCCCcceEEEEEEcCCE
Confidence            36999999999999999999999999999999986432    2234466788888888     67889999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +|+||||+ +++|.+++...+  .+++..++.++.||+.||+|||++|||||||||+|||++.++.++|+|||++.....
T Consensus        76 ~~lv~E~~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~  153 (376)
T cd05598          76 LYFVMDYIPGGDMMSLLIRLG--IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW  153 (376)
T ss_pred             EEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccc
Confidence            99999999 999999998754  789999999999999999999999999999999999999989999999988643211


Q ss_pred             C--CcccccCCCCCCEEEEecCC---------------cc---ccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHH
Q 013973          252 D--SSYFKRMPKSSAIKVIDFGS---------------TT---YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGC  311 (433)
Q Consensus       252 ~--~~~~~~~~~~~~~kl~Dfg~---------------a~---~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv  311 (433)
                      .  ...+.. .........+...               ..   .........+||+.|||||++.+..++.++|||||||
T Consensus       154 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv  232 (376)
T cd05598         154 THDSKYYQK-GDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV  232 (376)
T ss_pred             ccccccccc-ccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccc
Confidence            0  000000 0000000000000               00   0000112357999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhh
Q 013973          312 ILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH  391 (433)
Q Consensus       312 ~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (433)
                      ++|||++|..||.+.+..+....+.....                     .+..                        ..
T Consensus       233 ilyell~G~~Pf~~~~~~~~~~~i~~~~~---------------------~~~~------------------------~~  267 (376)
T cd05598         233 ILYEMLVGQPPFLADTPAETQLKVINWET---------------------TLHI------------------------PS  267 (376)
T ss_pred             eeeehhhCCCCCCCCCHHHHHHHHhccCc---------------------cccC------------------------CC
Confidence            99999999999987765544332211000                     0000                        01


Q ss_pred             cCCchhHHHHHHHhccccCCCCCC---CHHHHhcCCCCCCC
Q 013973          392 VDHSAGDLTHLLQGLLRYDPTDRL---TAREALRHPFFTRD  429 (433)
Q Consensus       392 ~~~~~~~~~~li~~~L~~dP~~R~---ta~ell~hp~f~~~  429 (433)
                      ...++.++.+||.+|+ .+|.+|+   ++.|+++||||+..
T Consensus       268 ~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~  307 (376)
T cd05598         268 QAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGI  307 (376)
T ss_pred             CCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence            1246778999999976 5999999   99999999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=3.7e-46  Score=361.27  Aligned_cols=250  Identities=23%  Similarity=0.385  Sum_probs=201.8

Q ss_pred             EEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           99 YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      |++++.||+|+||.||+|.+..+++.||||+++...    ...+....|+.++..+..  ..|+||+++++++...+.+|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~--l~hp~i~~~~~~~~~~~~~~   78 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANS--ERHPFLVNLFACFQTEDHVC   78 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccc--cCCCChhceeeEEEcCCEEE
Confidence            678999999999999999999999999999997432    223345566666654432  26799999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +||||+ +++|..++...   .+++..+..++.||+.||.|||++||+||||||+|||++.++                 
T Consensus        79 lv~E~~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~-----------------  138 (324)
T cd05589          79 FVMEYAAGGDLMMHIHTD---VFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEG-----------------  138 (324)
T ss_pred             EEEcCCCCCcHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCC-----------------
Confidence            999999 88998888653   699999999999999999999999999999999999995544                 


Q ss_pred             cccccCCCCCCEEEEecCCccccC---CCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYER---PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                                .+||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+
T Consensus       139 ----------~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~  208 (324)
T cd05589         139 ----------FVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE  208 (324)
T ss_pred             ----------cEEeCcccCCccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHH
Confidence                      56666666554321   11234579999999999999999999999999999999999999998776655


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+...                       ...                          .+..++.++.+||.+||+.|
T Consensus       209 ~~~~i~~~-----------------------~~~--------------------------~p~~~~~~~~~li~~~L~~d  239 (324)
T cd05589         209 VFDSIVND-----------------------EVR--------------------------YPRFLSREAISIMRRLLRRN  239 (324)
T ss_pred             HHHHHHhC-----------------------CCC--------------------------CCCCCCHHHHHHHHHHhhcC
Confidence            44332211                       001                          12346778999999999999


Q ss_pred             CCCCC-----CHHHHhcCCCCCCC
Q 013973          411 PTDRL-----TAREALRHPFFTRD  429 (433)
Q Consensus       411 P~~R~-----ta~ell~hp~f~~~  429 (433)
                      |.+||     ++.++++||||++.
T Consensus       240 P~~R~~~~~~~~~~l~~~~~f~~~  263 (324)
T cd05589         240 PERRLGSGEKDAEDVKKQPFFRDI  263 (324)
T ss_pred             HhHcCCCCCCCHHHHhhCCCcCCC
Confidence            99999     69999999999864

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=3.2e-46  Score=360.45  Aligned_cols=245  Identities=27%  Similarity=0.397  Sum_probs=195.6

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEe
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  178 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e  178 (433)
                      +.||+|+||.||+|.++.+++.||+|+++...    ........|..++...    .+|++++++++.+.+.+++|+|||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~----~~~~~i~~~~~~~~~~~~~~lv~E   76 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALA----WENPFLTHLYCTFQTKEHLFFVME   76 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhc----cCCCCccCeeEEEEeCCEEEEEEC
Confidence            47999999999999999999999999997432    2233345566665443    256889999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccc
Q 013973          179 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  257 (433)
Q Consensus       179 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~  257 (433)
                      |+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.++                     
T Consensus        77 ~~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~---------------------  133 (316)
T cd05620          77 FLNGGDLMFHIQDKG--RFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDG---------------------  133 (316)
T ss_pred             CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC---------------------
Confidence            99 899999987754  799999999999999999999999999999999999995544                     


Q ss_pred             cCCCCCCEEEEecCCccccC---CCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 013973          258 RMPKSSAIKVIDFGSTTYER---PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  334 (433)
Q Consensus       258 ~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~  334 (433)
                            .++|+|||++....   ......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+....
T Consensus       134 ------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~  207 (316)
T cd05620         134 ------HIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFES  207 (316)
T ss_pred             ------CEEeCccCCCeecccCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence                  45555565554211   112335799999999999999999999999999999999999999987665544333


Q ss_pred             HHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCC
Q 013973          335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  414 (433)
Q Consensus       335 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  414 (433)
                      +....                       .                          ..+...+.++.+||.+||+.||++|
T Consensus       208 ~~~~~-----------------------~--------------------------~~~~~~~~~~~~li~~~l~~dP~~R  238 (316)
T cd05620         208 IRVDT-----------------------P--------------------------HYPRWITKESKDILEKLFERDPTRR  238 (316)
T ss_pred             HHhCC-----------------------C--------------------------CCCCCCCHHHHHHHHHHccCCHHHc
Confidence            21100                       0                          0122456789999999999999999


Q ss_pred             CCH-HHHhcCCCCCCC
Q 013973          415 LTA-REALRHPFFTRD  429 (433)
Q Consensus       415 ~ta-~ell~hp~f~~~  429 (433)
                      +++ +++++||||+..
T Consensus       239 ~~~~~~~~~h~~f~~~  254 (316)
T cd05620         239 LGVVGNIRGHPFFKTI  254 (316)
T ss_pred             CCChHHHHcCCCcCCC
Confidence            997 589999999764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=9.6e-46  Score=359.44  Aligned_cols=293  Identities=23%  Similarity=0.330  Sum_probs=209.9

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      .++|++++.||+|+||.||+|++..++..||+|++...  ......+..|+++++++     +|+||+++++++...+.+
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~   78 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC-----NSPYIVGFYGAFYSDGEI   78 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHC-----CCCCCCeEEEEEEECCEE
Confidence            36799999999999999999999999999999998643  23445678899999888     678999999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL-CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      ++||||+ +++|.+++....  .+++..+..++.|++.||.|||+. +|+||||||+|||++.++               
T Consensus        79 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~---------------  141 (331)
T cd06649          79 SICMEHMDGGSLDQVLKEAK--RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRG---------------  141 (331)
T ss_pred             EEEeecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCC---------------
Confidence            9999999 899999998754  689999999999999999999986 599999999999995544               


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCC-CCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERP-DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                                  .+||+|||++..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+..+
T Consensus       142 ------------~~kl~Dfg~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~  209 (331)
T cd06649         142 ------------EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE  209 (331)
T ss_pred             ------------cEEEccCcccccccccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                        456666665543322 1233478999999999999899999999999999999999999998766544


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccC---cccCCCCcc---chhhHhhhccchhHHHHHhh--hcCCchhHHHHH
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRG---RLDWPEGAA---SRESIKSVMKLPRLQNLIMQ--HVDHSAGDLTHL  402 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l  402 (433)
                      ....    ++......   ............   .........   .........  ..+......  ....++.++++|
T Consensus       210 ~~~~----~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~l  280 (331)
T cd06649         210 LEAI----FGRPVVDG---EEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELL--DYIVNEPPPKLPNGVFTPDFQEF  280 (331)
T ss_pred             HHHH----hccccccc---ccCCccccCcccccccccccccccccccchhHHHHH--HHHHhCCCcCCCCccccHHHHHH
Confidence            3222    11110000   000000000000   000000000   000000000  000000000  012467889999


Q ss_pred             HHhccccCCCCCCCHHHHhcCCCCCCCCC
Q 013973          403 LQGLLRYDPTDRLTAREALRHPFFTRDHL  431 (433)
Q Consensus       403 i~~~L~~dP~~R~ta~ell~hp~f~~~~~  431 (433)
                      |.+||++||++|||+.|+++||||+....
T Consensus       281 i~~~L~~~P~~Rpt~~ell~h~~~~~~~~  309 (331)
T cd06649         281 VNKCLIKNPAERADLKMLMNHTFIKRSEV  309 (331)
T ss_pred             HHHHccCCcccCCCHHHHhcChHHhhccc
Confidence            99999999999999999999999987644

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=3.6e-46  Score=360.05  Aligned_cols=245  Identities=27%  Similarity=0.379  Sum_probs=196.7

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecchh----hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEe
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  178 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e  178 (433)
                      +.||+|+||.||+|.+..+++.||+|+++....    ..+....|..++..+    .+|++|+++++.+...+.+|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~----~~hp~i~~~~~~~~~~~~~~lv~e   76 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALA----WEHPFLTHLFCTFQTKEHLFFVME   76 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhc----cCCCCccceeeEEEcCCEEEEEEc
Confidence            469999999999999999999999999974321    222334455554433    267899999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccc
Q 013973          179 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  257 (433)
Q Consensus       179 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~  257 (433)
                      |+ |++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.                       
T Consensus        77 ~~~gg~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~-----------------------  131 (316)
T cd05592          77 YLNGGDLMFHIQSSG--RFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDK-----------------------  131 (316)
T ss_pred             CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECC-----------------------
Confidence            99 999999997654  7999999999999999999999999999999999999954                       


Q ss_pred             cCCCCCCEEEEecCCccccCC---CCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 013973          258 RMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  334 (433)
Q Consensus       258 ~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~  334 (433)
                          ++.+||+|||++.....   .....+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+.+..
T Consensus       132 ----~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~  207 (316)
T cd05592         132 ----DGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDS  207 (316)
T ss_pred             ----CCCEEEccCcCCeECCCCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence                45567777776653221   12335799999999999999999999999999999999999999988776554433


Q ss_pred             HHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCC
Q 013973          335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  414 (433)
Q Consensus       335 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  414 (433)
                      +.....                                                 ..+..++.++.+||.+||+.||++|
T Consensus       208 i~~~~~-------------------------------------------------~~~~~~~~~~~~ll~~~l~~~P~~R  238 (316)
T cd05592         208 ILNDRP-------------------------------------------------HFPRWISKEAKDCLSKLFERDPTKR  238 (316)
T ss_pred             HHcCCC-------------------------------------------------CCCCCCCHHHHHHHHHHccCCHHHc
Confidence            221100                                                 0123456789999999999999999


Q ss_pred             CCH-HHHhcCCCCCCC
Q 013973          415 LTA-REALRHPFFTRD  429 (433)
Q Consensus       415 ~ta-~ell~hp~f~~~  429 (433)
                      +++ .++++||||...
T Consensus       239 ~~~~~~l~~h~~~~~~  254 (316)
T cd05592         239 LGVDGDIRQHPFFRGI  254 (316)
T ss_pred             CCChHHHHcCcccCCC
Confidence            986 589999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-46  Score=361.24  Aligned_cols=247  Identities=28%  Similarity=0.387  Sum_probs=198.3

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC-e
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN-H  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~-~  172 (433)
                      ..+.+.+.||+|+||+||+|..+.+. .||+|++....   ...+.+..|+.+|.++     .||||+++++.+.... .
T Consensus        41 ~~l~~~~~iG~G~~g~V~~~~~~g~~-~vavK~~~~~~~~~~~~~~f~~E~~il~~l-----~HpNIV~f~G~~~~~~~~  114 (362)
T KOG0192|consen   41 DELPIEEVLGSGSFGTVYKGKWRGTD-VVAVKIISDPDFDDESRKAFRREASLLSRL-----RHPNIVQFYGACTSPPGS  114 (362)
T ss_pred             HHhhhhhhcccCCceeEEEEEeCCce-eEEEEEecchhcChHHHHHHHHHHHHHHhC-----CCCCeeeEEEEEcCCCCc
Confidence            34566677999999999999876432 29999997432   2255788999999998     7899999999999887 7


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC-MIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      ++|||||+ +|+|.++|+....+.+++..+..++.||++||+|||+++ ||||||||+|||++.++              
T Consensus       115 ~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~--------------  180 (362)
T KOG0192|consen  115 LCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKG--------------  180 (362)
T ss_pred             eEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCC--------------
Confidence            99999999 999999998854468999999999999999999999999 99999999999995432              


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCC---CCCceeecCcccchhhhh--CCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVIL--GLGWTYPCDIWSVGCILVELCTGEALFQT  325 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwSlGv~l~elltg~~Pf~~  325 (433)
                                  ..+||+|||+++....   ......||+.|||||++.  ...|+.++||||||+++|||+||..||.+
T Consensus       181 ------------~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~  248 (362)
T KOG0192|consen  181 ------------KTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFED  248 (362)
T ss_pred             ------------CEEEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCC
Confidence                        2667777777654442   223358999999999999  56899999999999999999999999998


Q ss_pred             CChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHh
Q 013973          326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  405 (433)
Q Consensus       326 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  405 (433)
                      ....+....+ ...+..|                                              ..+..+++.+.+||..
T Consensus       249 ~~~~~~~~~v-~~~~~Rp----------------------------------------------~~p~~~~~~l~~l~~~  281 (362)
T KOG0192|consen  249 LAPVQVASAV-VVGGLRP----------------------------------------------PIPKECPPHLSSLMER  281 (362)
T ss_pred             CCHHHHHHHH-HhcCCCC----------------------------------------------CCCccCCHHHHHHHHH
Confidence            8773332222 1111111                                              1123467789999999


Q ss_pred             ccccCCCCCCCHHHHhc
Q 013973          406 LLRYDPTDRLTAREALR  422 (433)
Q Consensus       406 ~L~~dP~~R~ta~ell~  422 (433)
                      ||+.||.+||+..+++.
T Consensus       282 CW~~dp~~RP~f~ei~~  298 (362)
T KOG0192|consen  282 CWLVDPSRRPSFLEIVS  298 (362)
T ss_pred             hCCCCCCcCCCHHHHHH
Confidence            99999999999887753

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.6e-47  Score=359.32  Aligned_cols=255  Identities=26%  Similarity=0.459  Sum_probs=225.7

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh---hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK---YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      +.+-|.+.+.||+|.|++|-+|++.-||+.||||++.+.+.   .......|+..|+.+     .|||||.+|+..++..
T Consensus        16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLV-----QHpNiVRLYEViDTQT   90 (864)
T KOG4717|consen   16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLV-----QHPNIVRLYEVIDTQT   90 (864)
T ss_pred             eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHh-----cCcCeeeeeehhcccc
Confidence            45679999999999999999999999999999999986543   234566799999888     6689999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+|||+|+- +|+|+|||-+.. ..+.++.+++|+.||+.|+.|+|+..+|||||||+||.+-                 
T Consensus        91 KlyLiLELGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFF-----------------  152 (864)
T KOG4717|consen   91 KLYLILELGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFF-----------------  152 (864)
T ss_pred             eEEEEEEecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEe-----------------
Confidence            999999999 899999998765 4699999999999999999999999999999999999983                 


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCC-CcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWT-YPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                               .+.+.+||.|||++..+.++.  .+.||+..|-|||++++..|+ +++||||||||||-|++|++||+..+
T Consensus       153 ---------EKlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAN  223 (864)
T KOG4717|consen  153 ---------EKLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAN  223 (864)
T ss_pred             ---------eecCceEeeeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCcccccc
Confidence                     466789999999997766655  567999999999999999998 78999999999999999999999999


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      +.+.+.+|...-...                                                 +++.+.+++|||..||
T Consensus       224 DSETLTmImDCKYtv-------------------------------------------------PshvS~eCrdLI~sML  254 (864)
T KOG4717|consen  224 DSETLTMIMDCKYTV-------------------------------------------------PSHVSKECRDLIQSML  254 (864)
T ss_pred             chhhhhhhhcccccC-------------------------------------------------chhhhHHHHHHHHHHH
Confidence            999888765543332                                                 3467889999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCC
Q 013973          408 RYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       408 ~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      +.||.+|.+.+|+..|+|++...
T Consensus       255 vRdPkkRAslEeI~s~~Wlq~~D  277 (864)
T KOG4717|consen  255 VRDPKKRASLEEIVSTSWLQAGD  277 (864)
T ss_pred             hcCchhhccHHHHhccccccCCC
Confidence            99999999999999999998653

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-47  Score=344.08  Aligned_cols=271  Identities=26%  Similarity=0.454  Sum_probs=220.3

Q ss_pred             EEEE-eeeeccccEEEEEEEECCCCeEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEE
Q 013973           99 YKIH-SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  176 (433)
Q Consensus        99 ~~~~-~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV  176 (433)
                      |++. +.||+|+|+.|--|+...++..||||++.+.. ..+.+..+|++++.++.    +|+||++++++|+++..+|||
T Consensus        79 YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cq----gh~nilqLiefFEdd~~FYLV  154 (463)
T KOG0607|consen   79 YKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQ----GHKNILQLIEFFEDDTRFYLV  154 (463)
T ss_pred             HHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhc----CCccHHHHHHHhcccceEEEE
Confidence            4443 67999999999999999999999999997653 45677788999998884    667899999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          177 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       177 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      ||.| ||.|..+|++..  .|++.++.+++.+|+.||.|||.+||.||||||+|||..+.                    
T Consensus       155 fEKm~GGplLshI~~~~--~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~p--------------------  212 (463)
T KOG0607|consen  155 FEKMRGGPLLSHIQKRK--HFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESP--------------------  212 (463)
T ss_pred             EecccCchHHHHHHHhh--hccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCC--------------------
Confidence            9999 999999998865  79999999999999999999999999999999999999643                    


Q ss_pred             cccCCCCCCEEEEecCCccccCC----------CCCceeecCcccchhhhhC-----CCCCCcchhHHHHHHHHHHHhCC
Q 013973          256 FKRMPKSSAIKVIDFGSTTYERP----------DQNYIVSTRHYRAPEVILG-----LGWTYPCDIWSVGCILVELCTGE  320 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~~----------~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~elltg~  320 (433)
                          +.-.-+|||||.++.....          .-.+.+|+..|||||++.-     ..|++++|.||||||+|-||+|.
T Consensus       213 ----n~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGY  288 (463)
T KOG0607|consen  213 ----NKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGY  288 (463)
T ss_pred             ----CCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCC
Confidence                2334577888776542221          1134589999999998852     34999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHH
Q 013973          321 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  400 (433)
Q Consensus       321 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (433)
                      +||.+.=..+        +|=.-.+.....+.....-|..|.+.+|+..                      |..+|.+++
T Consensus       289 pPFvG~Cg~d--------CGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkd----------------------WahIS~eak  338 (463)
T KOG0607|consen  289 PPFVGHCGAD--------CGWDRGEVCRVCQNKLFESIQEGKYEFPDKD----------------------WAHISSEAK  338 (463)
T ss_pred             CCccCccCCc--------CCccCCCccHHHHHHHHHHHhccCCcCChhh----------------------hHHhhHHHH
Confidence            9998642211        1222223334445555556778888888733                      357788999


Q ss_pred             HHHHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          401 HLLQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       401 ~li~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      |||+.+|.+|+.+|++|.++++|||++..
T Consensus       339 dlisnLlvrda~~rlsa~~vlnhPw~~~~  367 (463)
T KOG0607|consen  339 DLISNLLVRDAKQRLSAAQVLNHPWVQRC  367 (463)
T ss_pred             HHHHHHHhccHHhhhhhhhccCCcccccc
Confidence            99999999999999999999999999864

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=5.2e-46  Score=366.50  Aligned_cols=254  Identities=24%  Similarity=0.409  Sum_probs=205.4

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .++|++.+.||+|+||.||+|.++.+++.||+|++....    .....+..|+.+++.+     +|++|+.+++++.+.+
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~-----~h~~iv~~~~~~~~~~  116 (370)
T cd05596          42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHA-----NSEWIVQLHYAFQDDK  116 (370)
T ss_pred             HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-----CCCCcceEEEEEecCC
Confidence            467999999999999999999999999999999996432    1223355688888777     7799999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+|+||||+ ||+|.+++...   .+++..+..++.||+.||+|||+.|||||||||+|||++                 
T Consensus       117 ~~~lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~-----------------  176 (370)
T cd05596         117 YLYMVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD-----------------  176 (370)
T ss_pred             EEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEc-----------------
Confidence            999999999 99999998754   589999999999999999999999999999999999994                 


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCC----CCceeecCcccchhhhhCC----CCCCcchhHHHHHHHHHHHhCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVSTRHYRAPEVILGL----GWTYPCDIWSVGCILVELCTGEAL  322 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~----~~~~~~DvwSlGv~l~elltg~~P  322 (433)
                                .++.+||+|||++......    ....+||+.|+|||++.+.    .++.++|||||||++|||++|..|
T Consensus       177 ----------~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~P  246 (370)
T cd05596         177 ----------KSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP  246 (370)
T ss_pred             ----------CCCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCC
Confidence                      4456777777766543322    1235799999999999754    378999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       323 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      |.+.+....+..+....                     ..+.+|.                        ....+.++.+|
T Consensus       247 f~~~~~~~~~~~i~~~~---------------------~~~~~~~------------------------~~~~s~~~~~l  281 (370)
T cd05596         247 FYADSLVGTYSKIMDHK---------------------NSLTFPD------------------------DIEISKQAKDL  281 (370)
T ss_pred             cCCCCHHHHHHHHHcCC---------------------CcCCCCC------------------------cCCCCHHHHHH
Confidence            98876554443322110                     0111111                        12457789999


Q ss_pred             HHhccccCCCC--CCCHHHHhcCCCCCCC
Q 013973          403 LQGLLRYDPTD--RLTAREALRHPFFTRD  429 (433)
Q Consensus       403 i~~~L~~dP~~--R~ta~ell~hp~f~~~  429 (433)
                      |.+||+.+|.+  |+|++|+++||||++.
T Consensus       282 i~~~L~~~p~r~~R~s~~ell~h~~~~~~  310 (370)
T cd05596         282 ICAFLTDREVRLGRNGVDEIKSHPFFKND  310 (370)
T ss_pred             HHHHccChhhccCCCCHHHHhcCcccCCC
Confidence            99999999998  9999999999999864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=1.1e-45  Score=356.72  Aligned_cols=285  Identities=26%  Similarity=0.474  Sum_probs=207.6

Q ss_pred             EeeeeccccEEEEEEEEC--CCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec--CCeEEEEE
Q 013973          102 HSKMGEGTFGQVLECWDR--ERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY--RNHICIVF  177 (433)
Q Consensus       102 ~~~iG~G~~g~V~~~~~~--~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~--~~~~~lV~  177 (433)
                      .++||+|+||.||+|+++  .+++.||+|.+.... ......+|+.+++++     .|+||+++++.+..  ...+|+||
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~~~lv~   79 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-ISMSACREIALLREL-----KHPNVISLQKVFLSHADRKVWLLF   79 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-CcHHHHHHHHHHHhc-----CCCCCcceeeeEecCCCcEEEEEE
Confidence            368999999999999976  467889999987432 234567899999988     67899999998853  56789999


Q ss_pred             ecCCCCHHHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          178 EKLGSSLYDFLRKNN-------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       178 e~~~~~L~~~l~~~~-------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      ||++++|.+++....       ...+++..++.++.||+.||.|||++|||||||||+|||+...+              
T Consensus        80 e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~--------------  145 (317)
T cd07868          80 DYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG--------------  145 (317)
T ss_pred             eccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCC--------------
Confidence            999889999876321       12589999999999999999999999999999999999995322              


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCC------CCceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPD------QNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALF  323 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf  323 (433)
                               +..+.+||+|||++......      .....||+.|+|||++.+. .++.++|||||||++|+|++|.+||
T Consensus       146 ---------~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f  216 (317)
T cd07868         146 ---------PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF  216 (317)
T ss_pred             ---------CCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCc
Confidence                     34457888888887654322      1235789999999999874 5899999999999999999999999


Q ss_pred             CCCCh---------HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCC
Q 013973          324 QTHEN---------LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH  394 (433)
Q Consensus       324 ~~~~~---------~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (433)
                      .....         .+.+..+...+|..+...+.......+.......+...  ...         ..............
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---------~~~~~~~~~~~~~~  285 (317)
T cd07868         217 HCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRN--TYT---------NCSLIKYMEKHKVK  285 (317)
T ss_pred             cCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhcc--ccC---------cccccchHHhcCCC
Confidence            75432         34566677777776666555443221110000000000  000         00000011111123


Q ss_pred             chhHHHHHHHhccccCCCCCCCHHHHhcCCCC
Q 013973          395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFF  426 (433)
Q Consensus       395 ~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f  426 (433)
                      .+.++.+||.+||+.||.+|||++|+|+||||
T Consensus       286 ~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         286 PDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             CChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            35678999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=1.1e-45  Score=357.68  Aligned_cols=250  Identities=25%  Similarity=0.379  Sum_probs=201.3

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      +|++.+.||+|+||.||+|.++.+++.||+|+++...    ........|..++..+    .++++++++.+++...+.+
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~----~~~~~i~~~~~~~~~~~~~   76 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQ----DKPPFLTQLHSCFQTVDRL   76 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhc----cCCCchhheeeEEecCCEE
Confidence            3788999999999999999999999999999997432    1223345566666555    2456788999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      |+||||+ +++|.+++....  .+++..+..++.||+.||.|||++|||||||||+|||++.+                 
T Consensus        77 ~lv~Ey~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~-----------------  137 (323)
T cd05615          77 YFVMEYVNGGDLMYHIQQVG--KFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSE-----------------  137 (323)
T ss_pred             EEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCC-----------------
Confidence            9999999 899999997754  79999999999999999999999999999999999999544                 


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChH
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  329 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~  329 (433)
                                +.+||+|||++......   ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus       138 ----------~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~  207 (323)
T cd05615         138 ----------GHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED  207 (323)
T ss_pred             ----------CCEEEeccccccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH
Confidence                      45666666665432211   12346999999999999989999999999999999999999999877655


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      .....+...                       ...                          .+...+.++.+|+.+||++
T Consensus       208 ~~~~~i~~~-----------------------~~~--------------------------~p~~~~~~~~~li~~~l~~  238 (323)
T cd05615         208 ELFQSIMEH-----------------------NVS--------------------------YPKSLSKEAVSICKGLMTK  238 (323)
T ss_pred             HHHHHHHhC-----------------------CCC--------------------------CCccCCHHHHHHHHHHccc
Confidence            444332211                       111                          1234567899999999999


Q ss_pred             CCCCCCC-----HHHHhcCCCCCCC
Q 013973          410 DPTDRLT-----AREALRHPFFTRD  429 (433)
Q Consensus       410 dP~~R~t-----a~ell~hp~f~~~  429 (433)
                      ||.+|++     ..++++||||...
T Consensus       239 ~p~~R~~~~~~~~~~i~~h~~f~~~  263 (323)
T cd05615         239 HPSKRLGCGPEGERDIREHAFFRRI  263 (323)
T ss_pred             CHhhCCCCCCCCHHHHhcCcccCCC
Confidence            9999997     5799999999864

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=2e-46  Score=363.26  Aligned_cols=244  Identities=25%  Similarity=0.432  Sum_probs=198.1

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEe
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  178 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e  178 (433)
                      +.||+|+||.||+|.+..+++.||+|+++...    ........|+.+++.+     .|++|+.+.+.+...+.+|+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~-----~hp~i~~~~~~~~~~~~~~lv~E   75 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-----RHPFLTALKYSFQTHDRLCFVME   75 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-----CCCCCCceEEEEEcCCEEEEEEe
Confidence            46999999999999999999999999997432    2223445677777666     67899999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCceEeeccCccccCCCcCCCCCCCCCccc
Q 013973          179 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  256 (433)
Q Consensus       179 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~  256 (433)
                      |+ +++|.+++....  .+++..+..++.||+.||.|||+ .|||||||||+|||++.                      
T Consensus        76 ~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~----------------------  131 (325)
T cd05594          76 YANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK----------------------  131 (325)
T ss_pred             CCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECC----------------------
Confidence            99 899999987654  79999999999999999999997 79999999999999954                      


Q ss_pred             ccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 013973          257 KRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA  333 (433)
Q Consensus       257 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~  333 (433)
                           ++.+||+|||++......   ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+...
T Consensus       132 -----~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~  206 (325)
T cd05594         132 -----DGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE  206 (325)
T ss_pred             -----CCCEEEecCCCCeecCCCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHH
Confidence                 455677777766532211   123479999999999999999999999999999999999999998766544333


Q ss_pred             HHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCC
Q 013973          334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  413 (433)
Q Consensus       334 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  413 (433)
                      .+..                       +...                          .+..+++++.+||.+||+.||++
T Consensus       207 ~i~~-----------------------~~~~--------------------------~p~~~~~~~~~li~~~L~~dP~~  237 (325)
T cd05594         207 LILM-----------------------EEIR--------------------------FPRTLSPEAKSLLSGLLKKDPKQ  237 (325)
T ss_pred             HHhc-----------------------CCCC--------------------------CCCCCCHHHHHHHHHHhhcCHHH
Confidence            2211                       1111                          12356778999999999999999


Q ss_pred             CC-----CHHHHhcCCCCCCC
Q 013973          414 RL-----TAREALRHPFFTRD  429 (433)
Q Consensus       414 R~-----ta~ell~hp~f~~~  429 (433)
                      |+     ++.++++||||...
T Consensus       238 R~~~~~~~~~~il~h~~~~~~  258 (325)
T cd05594         238 RLGGGPDDAKEIMQHKFFAGI  258 (325)
T ss_pred             hCCCCCCCHHHHhcCCCcCCC
Confidence            97     89999999999863

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.3e-46  Score=351.97  Aligned_cols=257  Identities=24%  Similarity=0.390  Sum_probs=206.5

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      +|++.+.||+|+||.||++.+..+++.||+|++....    .....+..|+.+++.+     +|++++.+++.+...+.+
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~   75 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-----NSRFVVSLAYAYETKDAL   75 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhc-----CCCCEeeeeeeecCCCeE
Confidence            4899999999999999999999999999999986432    1223456788888888     668899999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      |+||||+ +++|.+++.......+++..+..++.|++.||.|||+.||+||||||+||++++                  
T Consensus        76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~------------------  137 (285)
T cd05605          76 CLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDD------------------  137 (285)
T ss_pred             EEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECC------------------
Confidence            9999999 899999887655457999999999999999999999999999999999999944                  


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                               ++.++|+|||++.......  ...+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+...
T Consensus       138 ---------~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~  208 (285)
T cd05605         138 ---------YGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV  208 (285)
T ss_pred             ---------CCCEEEeeCCCceecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh
Confidence                     4556777777665432221  23478999999999999899999999999999999999999998755433


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+.....                   .+.                          ...+..++..+.+||.+||+.|
T Consensus       209 ~~~~~~~~~~-------------------~~~--------------------------~~~~~~~~~~~~~li~~~l~~~  243 (285)
T cd05605         209 KREEVERRVK-------------------EDQ--------------------------EEYSEKFSEAARSICRQLLTKD  243 (285)
T ss_pred             HHHHHHHHhh-------------------hcc--------------------------cccCcccCHHHHHHHHHHccCC
Confidence            2222211110                   000                          0112346778999999999999


Q ss_pred             CCCCC-----CHHHHhcCCCCCCCCC
Q 013973          411 PTDRL-----TAREALRHPFFTRDHL  431 (433)
Q Consensus       411 P~~R~-----ta~ell~hp~f~~~~~  431 (433)
                      |.+||     +++++++||||.....
T Consensus       244 P~~R~~~~~~~~~~l~~~~~~~~~~~  269 (285)
T cd05605         244 PGFRLGCRGEGAEEVKAHPFFRTANF  269 (285)
T ss_pred             HHHhcCCCCCCHHHHhcCcCccCCCH
Confidence            99999     8999999999987543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=3e-46  Score=367.13  Aligned_cols=277  Identities=23%  Similarity=0.384  Sum_probs=210.1

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++++.||+|+||.||+|.++.+++.||+|+++...    .....+..|+.++..+     .|++++++++.+.+.+.
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~iv~~~~~~~~~~~   75 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEA-----DGAWVVKMFYSFQDKRN   75 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-----CCCCEeeEEEEEEcCCE
Confidence            35999999999999999999999999999999997432    2234456688888776     67889999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +|+||||+ |++|.+++...+  .+++..++.++.||+.||+|||++|||||||||+|||++.+|.++|+|||++.....
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~  153 (360)
T cd05627          76 LYLIMEFLPGGDMMTLLMKKD--TLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKK  153 (360)
T ss_pred             EEEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCccccc
Confidence            99999999 899999997654  799999999999999999999999999999999999999999999999998764432


Q ss_pred             CCcc--cccCCCCCCEEEEecCCcccc------------CCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHH
Q 013973          252 DSSY--FKRMPKSSAIKVIDFGSTTYE------------RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC  317 (433)
Q Consensus       252 ~~~~--~~~~~~~~~~kl~Dfg~a~~~------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ell  317 (433)
                      ....  ......   ..-.++.+....            .......+||+.|+|||++.+..++.++|||||||++|||+
T Consensus       154 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~  230 (360)
T cd05627         154 AHRTEFYRNLTH---NPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEML  230 (360)
T ss_pred             cccccccccccc---CCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecc
Confidence            1100  000000   000011100000            00012357999999999999999999999999999999999


Q ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchh
Q 013973          318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG  397 (433)
Q Consensus       318 tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  397 (433)
                      +|..||.+.+..+....+...                     ...+.+|.                        ...++.
T Consensus       231 tG~~Pf~~~~~~~~~~~i~~~---------------------~~~~~~p~------------------------~~~~s~  265 (360)
T cd05627         231 IGYPPFCSETPQETYRKVMNW---------------------KETLVFPP------------------------EVPISE  265 (360)
T ss_pred             cCCCCCCCCCHHHHHHHHHcC---------------------CCceecCC------------------------CCCCCH
Confidence            999999877665544332210                     00011111                        113567


Q ss_pred             HHHHHHHhccccCCCCCC---CHHHHhcCCCCCCC
Q 013973          398 DLTHLLQGLLRYDPTDRL---TAREALRHPFFTRD  429 (433)
Q Consensus       398 ~~~~li~~~L~~dP~~R~---ta~ell~hp~f~~~  429 (433)
                      ++++||.+|+. ||.+|+   ++.|+++||||++.
T Consensus       266 ~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~  299 (360)
T cd05627         266 KAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGV  299 (360)
T ss_pred             HHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCC
Confidence            89999999774 999999   48999999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=5.3e-46  Score=359.74  Aligned_cols=244  Identities=22%  Similarity=0.361  Sum_probs=199.1

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEe
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  178 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e  178 (433)
                      +.||+|+||.||+|+++.+++.||+|+++...    ........|.+++..+.    +|++|+.+++.+...+.+|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~----~hp~i~~~~~~~~~~~~~~lv~E   76 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAA----KHPFLTALHCCFQTKDRLFFVME   76 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhcc----CCCCccceeeEEEcCCeEEEEEe
Confidence            46999999999999999999999999997432    22334556777666542    56889999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccc
Q 013973          179 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  257 (433)
Q Consensus       179 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~  257 (433)
                      |+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++                        
T Consensus        77 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~------------------------  130 (321)
T cd05591          77 YVNGGDLMFQIQRSR--KFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLD------------------------  130 (321)
T ss_pred             CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC------------------------
Confidence            99 899999987654  799999999999999999999999999999999999994                        


Q ss_pred             cCCCCCCEEEEecCCccccCC---CCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 013973          258 RMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  334 (433)
Q Consensus       258 ~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~  334 (433)
                         .++.+||+|||++.....   .....+||+.|+|||++.+..++.++|||||||++|||++|..||...+..+.+..
T Consensus       131 ---~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~  207 (321)
T cd05591         131 ---AEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFES  207 (321)
T ss_pred             ---CCCCEEEeecccceecccCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHH
Confidence               445677777776653221   12335799999999999999999999999999999999999999988776555443


Q ss_pred             HHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCC
Q 013973          335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  414 (433)
Q Consensus       335 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  414 (433)
                      +..                       +...                          .+..++.++.+||.+||+.||++|
T Consensus       208 i~~-----------------------~~~~--------------------------~p~~~~~~~~~ll~~~L~~dp~~R  238 (321)
T cd05591         208 ILH-----------------------DDVL--------------------------YPVWLSKEAVSILKAFMTKNPNKR  238 (321)
T ss_pred             HHc-----------------------CCCC--------------------------CCCCCCHHHHHHHHHHhccCHHHc
Confidence            221                       1111                          122456789999999999999999


Q ss_pred             C-------CHHHHhcCCCCCC
Q 013973          415 L-------TAREALRHPFFTR  428 (433)
Q Consensus       415 ~-------ta~ell~hp~f~~  428 (433)
                      +       ++.++++||||..
T Consensus       239 ~~~~~~~~~~~~~~~hp~~~~  259 (321)
T cd05591         239 LGCVASQGGEDAIKQHPFFKE  259 (321)
T ss_pred             CCCCCCCCCHHHHhcCCccCC
Confidence            9       8999999999975

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=6.5e-46  Score=365.54  Aligned_cols=254  Identities=24%  Similarity=0.416  Sum_probs=204.0

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .++|++.+.||+|+||.||+|.++.+++.||+|++.+..    .....+..|+.+++.+     +|++|+++++.+.++.
T Consensus        42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-----~hp~iv~~~~~~~~~~  116 (370)
T cd05621          42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-----NSPWVVQLFCAFQDDK  116 (370)
T ss_pred             HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-----CCCCEeeEEEEEEcCC
Confidence            467999999999999999999999999999999986422    1233455688887776     7799999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+|+||||+ +|+|.+++...   .+++..+..++.||+.||+|||++||+||||||+|||++                 
T Consensus       117 ~~~lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~-----------------  176 (370)
T cd05621         117 YLYMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLD-----------------  176 (370)
T ss_pred             EEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEC-----------------
Confidence            999999999 99999999754   589999999999999999999999999999999999994                 


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCC----CCCcchhHHHHHHHHHHHhCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEAL  322 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlGv~l~elltg~~P  322 (433)
                                .++.+||+|||++.......    ...+||+.|+|||++.+..    ++.++|||||||++|||++|..|
T Consensus       177 ----------~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~P  246 (370)
T cd05621         177 ----------KHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP  246 (370)
T ss_pred             ----------CCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCC
Confidence                      44567777777776443221    2457999999999998643    78999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       323 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      |.+.+....+..+....                     ..+.+|.                        ....+..++++
T Consensus       247 f~~~~~~~~~~~i~~~~---------------------~~~~~p~------------------------~~~~s~~~~~l  281 (370)
T cd05621         247 FYADSLVGTYSKIMDHK---------------------NSLNFPE------------------------DVEISKHAKNL  281 (370)
T ss_pred             CCCCCHHHHHHHHHhCC---------------------cccCCCC------------------------cccCCHHHHHH
Confidence            98776655444332210                     0111221                        11356789999


Q ss_pred             HHhccccCCCC--CCCHHHHhcCCCCCCC
Q 013973          403 LQGLLRYDPTD--RLTAREALRHPFFTRD  429 (433)
Q Consensus       403 i~~~L~~dP~~--R~ta~ell~hp~f~~~  429 (433)
                      |.+||+.++.+  |+++.|+++||||+..
T Consensus       282 i~~~L~~~~~r~~R~~~~e~l~hp~~~~~  310 (370)
T cd05621         282 ICAFLTDREVRLGRNGVEEIKQHPFFKND  310 (370)
T ss_pred             HHHHccCchhccCCCCHHHHhcCcccCCC
Confidence            99999866544  8899999999999864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3e-45  Score=363.95  Aligned_cols=280  Identities=24%  Similarity=0.419  Sum_probs=210.0

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEEC--CCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDR--ERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~--~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .+..+|++++.||+|+||.||+|...  .+++.||+|.+....    ....|+.+++.+     .|++|+++++.+....
T Consensus        89 ~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~----~~~~E~~il~~l-----~h~~iv~~~~~~~~~~  159 (392)
T PHA03207         89 VVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK----TPGREIDILKTI-----SHRAIINLIHAYRWKS  159 (392)
T ss_pred             hccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc----cHHHHHHHHHhc-----CCCCccceeeeEeeCC
Confidence            34568999999999999999999764  356789999886432    345689999988     6789999999999999


Q ss_pred             eEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          172 HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       172 ~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      .+|+|||+++++|.+++...  ..+++..+..++.||+.||.|||++|||||||||+|||++.++               
T Consensus       160 ~~~lv~e~~~~~l~~~l~~~--~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~---------------  222 (392)
T PHA03207        160 TVCMVMPKYKCDLFTYVDRS--GPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPE---------------  222 (392)
T ss_pred             EEEEEehhcCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCC---------------
Confidence            99999999988999999544  3799999999999999999999999999999999999995544               


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                                  .++|+|||++.......     ....||+.|+|||++.+..|+.++|||||||++|||++|..||.+.
T Consensus       223 ------------~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~  290 (392)
T PHA03207        223 ------------NAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGK  290 (392)
T ss_pred             ------------CEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence                        45566666554322211     2347999999999999999999999999999999999999999764


Q ss_pred             C---hHHHHHHHHHHhCCCCHHHHHHHh----hhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHH
Q 013973          327 E---NLEHLAMMERVLGPLPQHMLKRVD----RHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL  399 (433)
Q Consensus       327 ~---~~~~~~~i~~~~~~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (433)
                      .   ....+..+.+.++..+.+......    .....+.......++.              +   ...  ....++.++
T Consensus       291 ~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~---~~~--~~~~~~~~~  351 (392)
T PHA03207        291 QVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTI--------------P---PVI--RKYGMHMDV  351 (392)
T ss_pred             CCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccc--------------c---chh--hccCcchhH
Confidence            3   345556666666554433211110    0011111000000000              0   000  012346688


Q ss_pred             HHHHHhccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          400 THLLQGLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       400 ~~li~~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      .+||.+||+.||++|||+.|+|.||||++.+
T Consensus       352 ~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~  382 (392)
T PHA03207        352 EYLIAKMLTFDQEFRPSAQDILSLPLFTKEP  382 (392)
T ss_pred             HHHHHHHhccChhhCCCHHHHhhCchhhccc
Confidence            9999999999999999999999999998765

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-47  Score=393.37  Aligned_cols=255  Identities=26%  Similarity=0.436  Sum_probs=211.9

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .++|.+++.||+|+||.|.+++.+.+++.||+|++++-    ......+..|..+|...     +.+.|+++...|+++.
T Consensus        74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~-----ns~Wiv~LhyAFQD~~  148 (1317)
T KOG0612|consen   74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFG-----NSEWIVQLHYAFQDER  148 (1317)
T ss_pred             HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcC-----CcHHHHHHHHHhcCcc
Confidence            46899999999999999999999999999999999752    23345677788888655     5688999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      ++|+||||+ ||+|..+|.+.+  ++|++.+++|+.+|+.||.-||+.|+|||||||+||||+..|              
T Consensus       149 ~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~G--------------  212 (1317)
T KOG0612|consen  149 YLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSG--------------  212 (1317)
T ss_pred             ceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccC--------------
Confidence            999999999 999999998876  899999999999999999999999999999999999995555              


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhC-----CCCCCcchhHHHHHHHHHHHhCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILG-----LGWTYPCDIWSVGCILVELCTGEA  321 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~elltg~~  321 (433)
                                   ++||+|||.+.....++    ...+|||.|++||++..     +.|+..+||||+||++|||+.|..
T Consensus       213 -------------HikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~T  279 (1317)
T KOG0612|consen  213 -------------HIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGET  279 (1317)
T ss_pred             -------------cEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCC
Confidence                         55555555554433332    33589999999999973     459999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       322 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      ||..++-.+++..|...                     +..+.+|+.                        ...|.++++
T Consensus       280 PFYadslveTY~KIm~h---------------------k~~l~FP~~------------------------~~VSeeakd  314 (1317)
T KOG0612|consen  280 PFYADSLVETYGKIMNH---------------------KESLSFPDE------------------------TDVSEEAKD  314 (1317)
T ss_pred             cchHHHHHHHHHHHhch---------------------hhhcCCCcc------------------------cccCHHHHH
Confidence            99988888887776543                     112223311                        246889999


Q ss_pred             HHHhccccCCCCCCC---HHHHhcCCCCCCCC
Q 013973          402 LLQGLLRYDPTDRLT---AREALRHPFFTRDH  430 (433)
Q Consensus       402 li~~~L~~dP~~R~t---a~ell~hp~f~~~~  430 (433)
                      ||+++|. +|+.|++   ++++..||||.+..
T Consensus       315 LI~~ll~-~~e~RLgrngiedik~HpFF~g~~  345 (1317)
T KOG0612|consen  315 LIEALLC-DREVRLGRNGIEDIKNHPFFEGID  345 (1317)
T ss_pred             HHHHHhc-ChhhhcccccHHHHHhCccccCCC
Confidence            9999887 6889998   99999999998753

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=7.8e-46  Score=360.21  Aligned_cols=254  Identities=25%  Similarity=0.421  Sum_probs=198.0

Q ss_pred             cEEEEeeeeccccEEEEEEEEC---CCCeEEEEEEeecch-----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           98 RYKIHSKMGEGTFGQVLECWDR---ERKEMVAIKIVRGIK-----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~---~~~~~vAiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      +|++++.||+|+||.||+|++.   .+++.||+|++....     ...+....|+.++..+.    +|++|+.+++.+..
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~----~~~~i~~~~~~~~~   76 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVR----QSPFLVTLHYAFQT   76 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhcc----CCCCcccEEEEEec
Confidence            4899999999999999999864   578899999986432     12234556777777763    46789999999999


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      .+.+++||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.              
T Consensus        77 ~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~--------------  140 (332)
T cd05614          77 EAKLHLILDYVSGGEMFTHLYQRD--NFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDS--------------  140 (332)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECC--------------
Confidence            99999999999 899999997654  6999999999999999999999999999999999999954              


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCC----CCceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALF  323 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf  323 (433)
                                   ++.+||+|||++......    ....+||+.|+|||++.+. .++.++|||||||++|||++|..||
T Consensus       141 -------------~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf  207 (332)
T cd05614         141 -------------EGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPF  207 (332)
T ss_pred             -------------CCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCC
Confidence                         455677777766533211    1235799999999999875 4789999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      ...........+...                   +....                          ...+...+..+.+||
T Consensus       208 ~~~~~~~~~~~~~~~-------------------~~~~~--------------------------~~~~~~~~~~~~~li  242 (332)
T cd05614         208 TLEGERNTQSEVSRR-------------------ILKCD--------------------------PPFPSFIGPEAQDLL  242 (332)
T ss_pred             CCCCCCCCHHHHHHH-------------------HhcCC--------------------------CCCCCCCCHHHHHHH
Confidence            753321111110000                   00000                          012235677899999


Q ss_pred             HhccccCCCCCC-----CHHHHhcCCCCCCC
Q 013973          404 QGLLRYDPTDRL-----TAREALRHPFFTRD  429 (433)
Q Consensus       404 ~~~L~~dP~~R~-----ta~ell~hp~f~~~  429 (433)
                      .+||+.||++||     +++++++||||++.
T Consensus       243 ~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~  273 (332)
T cd05614         243 HKLLRKDPKKRLGAGPQGASEIKEHPFFKGL  273 (332)
T ss_pred             HHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            999999999999     78899999999864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=1.3e-45  Score=356.13  Aligned_cols=245  Identities=24%  Similarity=0.386  Sum_probs=196.8

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEe
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  178 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e  178 (433)
                      +.||+|+||.||+|.+..+++.||+|+++...    ........|..++..+    ..|++|+++++.+.+.+.+|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~----~~hp~iv~~~~~~~~~~~~~lv~e   76 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA----WEHPFLTHLYCTFQTKENLFFVME   76 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhc----cCCCcCcceEEEEEeCCEEEEEEe
Confidence            47999999999999999999999999997432    2233345566665543    267899999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccc
Q 013973          179 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  257 (433)
Q Consensus       179 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~  257 (433)
                      |+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.+                      
T Consensus        77 y~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~----------------------  132 (316)
T cd05619          77 YLNGGDLMFHIQSCH--KFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTD----------------------  132 (316)
T ss_pred             CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCC----------------------
Confidence            99 899999998653  78999999999999999999999999999999999999544                      


Q ss_pred             cCCCCCCEEEEecCCccccC---CCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 013973          258 RMPKSSAIKVIDFGSTTYER---PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  334 (433)
Q Consensus       258 ~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~  334 (433)
                           +.+||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+....
T Consensus       133 -----~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~  207 (316)
T cd05619         133 -----GHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQS  207 (316)
T ss_pred             -----CCEEEccCCcceECCCCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence                 456666666654321   112335799999999999999999999999999999999999999987665544333


Q ss_pred             HHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCC
Q 013973          335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  414 (433)
Q Consensus       335 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  414 (433)
                      +...                       ..                          ..+..++.++.+||.+||+.||++|
T Consensus       208 i~~~-----------------------~~--------------------------~~~~~~~~~~~~li~~~l~~~P~~R  238 (316)
T cd05619         208 IRMD-----------------------NP--------------------------CYPRWLTREAKDILVKLFVREPERR  238 (316)
T ss_pred             HHhC-----------------------CC--------------------------CCCccCCHHHHHHHHHHhccCHhhc
Confidence            2110                       00                          0112356689999999999999999


Q ss_pred             CCHH-HHhcCCCCCCC
Q 013973          415 LTAR-EALRHPFFTRD  429 (433)
Q Consensus       415 ~ta~-ell~hp~f~~~  429 (433)
                      +++. ++++||||+..
T Consensus       239 ~~~~~~l~~h~~~~~~  254 (316)
T cd05619         239 LGVKGDIRQHPFFREI  254 (316)
T ss_pred             CCChHHHHcCcccCCC
Confidence            9996 99999999874

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=5.5e-46  Score=360.95  Aligned_cols=254  Identities=26%  Similarity=0.428  Sum_probs=203.3

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh----hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++.+.||+|+||.||+|.++.+++.||+|+++....    ....+..|+.+++.+     +|++|+.+++.+.+.+.
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-----~~~~i~~~~~~~~~~~~   75 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSIS-----NSPWIPQLQYAFQDKDN   75 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-----CCCCCcceeeEEecCCe
Confidence            359999999999999999999999999999999975322    334456677777665     67899999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +|+||||+ +++|.+++.... ..+++..+..++.||+.||+|||+.||+||||||+|||++.                 
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~-----------------  137 (330)
T cd05601          76 LYLVMEYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDR-----------------  137 (330)
T ss_pred             EEEEECCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECC-----------------
Confidence            99999999 999999998753 37999999999999999999999999999999999999954                 


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhh------CCCCCCcchhHHHHHHHHHHHhCCC
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVIL------GLGWTYPCDIWSVGCILVELCTGEA  321 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~------~~~~~~~~DvwSlGv~l~elltg~~  321 (433)
                                ++.+||+|||++.......    ....||+.|+|||++.      ...++.++|||||||++|||++|..
T Consensus       138 ----------~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~  207 (330)
T cd05601         138 ----------TGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRS  207 (330)
T ss_pred             ----------CCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCC
Confidence                      4456666666665433222    1236899999999997      4568899999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       322 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      ||...+....+..+...                     ...+.+|.                        ....+.++.+
T Consensus       208 Pf~~~~~~~~~~~i~~~---------------------~~~~~~~~------------------------~~~~~~~~~~  242 (330)
T cd05601         208 PFHEGTSAKTYNNIMNF---------------------QRFLKFPE------------------------DPKVSSDFLD  242 (330)
T ss_pred             CCCCCCHHHHHHHHHcC---------------------CCccCCCC------------------------CCCCCHHHHH
Confidence            99876655444332211                     00011111                        1245678999


Q ss_pred             HHHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          402 LLQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       402 li~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      ||.+||+ ||.+|||+.++++||||+..
T Consensus       243 li~~ll~-~p~~R~t~~~l~~h~~~~~~  269 (330)
T cd05601         243 LIQSLLC-GQKERLGYEGLCCHPFFSKI  269 (330)
T ss_pred             HHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence            9999998 99999999999999999863

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=4.5e-45  Score=349.91  Aligned_cols=283  Identities=27%  Similarity=0.458  Sum_probs=219.8

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ++|++++.||+|+||.||+|.++.+++.||+|.++...  ........|+.+++.+     .|+||+++++++...+.++
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~nI~~~~~~~~~~~~~~   80 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL-----KHANIVTLHDIIHTEKSLT   80 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhc-----CCCCcceEEEEEecCCeEE
Confidence            56999999999999999999999999999999986332  2234566789999888     6789999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          175 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       175 lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      +||||+.++|.+++.... ..+++..+..++.||+.||+|||+.||+|+||||+|||+++++                  
T Consensus        81 lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~------------------  141 (301)
T cd07873          81 LVFEYLDKDLKQYLDDCG-NSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERG------------------  141 (301)
T ss_pred             EEEeccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCC------------------
Confidence            999999889999987653 3689999999999999999999999999999999999996554                  


Q ss_pred             ccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                               .++|+|||.+.......   ....+++.|+|||++.+. .++.++|||||||++|+|++|.+||...+..+
T Consensus       142 ---------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~  212 (301)
T cd07873         142 ---------ELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE  212 (301)
T ss_pred             ---------cEEECcCcchhccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                     45555555554322111   123578899999998764 47899999999999999999999999888888


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+...++..+...+.........    .....+..               ...........++.++++||.+||+.|
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~---------------~~~~~~~~~~~~~~~~~~li~~ml~~d  273 (301)
T cd07873         213 QLHFIFRILGTPTEETWPGILSNEEF----KSYNYPKY---------------RADCLHNHAPRLDSDGAELLSKLLQFE  273 (301)
T ss_pred             HHHHHHHHcCCCChhhchhhhccccc----cccccCcc---------------ccccHHhhcCCCCHHHHHHHHHHhcCC
Confidence            88888888877666554433211100    00001100               000111123456778999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCCCC
Q 013973          411 PTDRLTAREALRHPFFTRDHL  431 (433)
Q Consensus       411 P~~R~ta~ell~hp~f~~~~~  431 (433)
                      |.+|||+.|+|+||||+....
T Consensus       274 p~~R~t~~eil~h~~f~~~~~  294 (301)
T cd07873         274 GRKRISAEEAMKHPYFHCLGE  294 (301)
T ss_pred             cccCcCHHHHhcCcccccccc
Confidence            999999999999999987654

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.3e-45  Score=357.21  Aligned_cols=245  Identities=24%  Similarity=0.433  Sum_probs=199.2

Q ss_pred             EeeeeccccEEEEEEEEC---CCCeEEEEEEeecch-----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973          102 HSKMGEGTFGQVLECWDR---ERKEMVAIKIVRGIK-----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus       102 ~~~iG~G~~g~V~~~~~~---~~~~~vAiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      ++.||+|+||.||+|++.   .+++.||+|+++...     ........|+.+++.+     .|+||+++++.+..++.+
T Consensus         1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l-----~hp~iv~~~~~~~~~~~~   75 (323)
T cd05584           1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAV-----KHPFIVDLIYAFQTGGKL   75 (323)
T ss_pred             CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhC-----CCCchhceeeEEecCCeE
Confidence            368999999999999864   578899999997432     2223456788888888     678999999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      |+||||+ +++|.+++...+  .+++..+..++.||+.||+|||++||+||||||+|||++.                  
T Consensus        76 ~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~------------------  135 (323)
T cd05584          76 YLILEYLSGGELFMHLEREG--IFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDA------------------  135 (323)
T ss_pred             EEEEeCCCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC------------------
Confidence            9999999 899999998754  7899999999999999999999999999999999999954                  


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChH
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  329 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~  329 (433)
                               ++.+||+|||++......   ....+||+.|+|||++.+..++.++|||||||++|||++|..||...+..
T Consensus       136 ---------~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~  206 (323)
T cd05584         136 ---------QGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK  206 (323)
T ss_pred             ---------CCCEEEeeCcCCeecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH
Confidence                     455677777766432111   12357999999999999988999999999999999999999999876654


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      .....+..                       +...                          .+..++.++.+||.+||++
T Consensus       207 ~~~~~~~~-----------------------~~~~--------------------------~~~~~~~~~~~li~~~l~~  237 (323)
T cd05584         207 KTIDKILK-----------------------GKLN--------------------------LPPYLTPEARDLLKKLLKR  237 (323)
T ss_pred             HHHHHHHc-----------------------CCCC--------------------------CCCCCCHHHHHHHHHHccc
Confidence            43332211                       1111                          1234567899999999999


Q ss_pred             CCCCCC-----CHHHHhcCCCCCCC
Q 013973          410 DPTDRL-----TAREALRHPFFTRD  429 (433)
Q Consensus       410 dP~~R~-----ta~ell~hp~f~~~  429 (433)
                      ||++||     ++.++++||||...
T Consensus       238 ~p~~R~~~~~~~~~~l~~h~~~~~~  262 (323)
T cd05584         238 NPSSRLGAGPGDAAEVQSHPFFRHV  262 (323)
T ss_pred             CHhHcCCCCCCCHHHHhcCCCcCCC
Confidence            999999     89999999999754

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=2.1e-45  Score=355.03  Aligned_cols=245  Identities=25%  Similarity=0.391  Sum_probs=198.6

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEe
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  178 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e  178 (433)
                      +.||+|+||+||+|.+..+++.||+|++++..    ........|..++..+.    +|++|+++++++...+.+|+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~----~h~~i~~~~~~~~~~~~~~lv~e   76 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAG----KHPFLTQLHSCFQTKDRLFFVME   76 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhcc----CCCCccceeeEEEcCCEEEEEEc
Confidence            47999999999999999999999999997432    22334456777766553    56889999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccc
Q 013973          179 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  257 (433)
Q Consensus       179 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~  257 (433)
                      |+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.+                      
T Consensus        77 ~~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~----------------------  132 (318)
T cd05570          77 YVNGGDLMFHIQRSG--RFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSE----------------------  132 (318)
T ss_pred             CCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCC----------------------
Confidence            99 899999987764  79999999999999999999999999999999999999544                      


Q ss_pred             cCCCCCCEEEEecCCccccCC---CCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 013973          258 RMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  334 (433)
Q Consensus       258 ~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~  334 (433)
                           +.+||+|||++.....   .....+||+.|+|||++.+..++.++|+|||||++|+|++|..||.+.+..+....
T Consensus       133 -----~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~  207 (318)
T cd05570         133 -----GHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQS  207 (318)
T ss_pred             -----CcEEecccCCCeecCcCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHH
Confidence                 4566666665543211   12235799999999999999999999999999999999999999987665544332


Q ss_pred             HHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCC
Q 013973          335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  414 (433)
Q Consensus       335 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  414 (433)
                      +..                       +...                          .+..++.++.+||.+||+.||.+|
T Consensus       208 i~~-----------------------~~~~--------------------------~~~~~~~~~~~li~~~l~~dP~~R  238 (318)
T cd05570         208 ILE-----------------------DEVR--------------------------YPRWLSKEAKSILKSFLTKNPEKR  238 (318)
T ss_pred             HHc-----------------------CCCC--------------------------CCCcCCHHHHHHHHHHccCCHHHc
Confidence            211                       0111                          122456789999999999999999


Q ss_pred             CCH-----HHHhcCCCCCCC
Q 013973          415 LTA-----REALRHPFFTRD  429 (433)
Q Consensus       415 ~ta-----~ell~hp~f~~~  429 (433)
                      |++     .++++||||+..
T Consensus       239 ~s~~~~~~~~ll~~~~~~~~  258 (318)
T cd05570         239 LGCLPTGEQDIKGHPFFREI  258 (318)
T ss_pred             CCCCCCCHHHHhcCCCcCCC
Confidence            999     999999999764

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=2.1e-45  Score=356.74  Aligned_cols=253  Identities=22%  Similarity=0.396  Sum_probs=194.5

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEe
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  178 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e  178 (433)
                      +.||+|+||.||+|.+..+++.||+|+++...    .....+..|..++..+.    +|++|+.+++++.+.+.+|+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~----~hp~Iv~~~~~~~~~~~~~lv~e   76 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETAS----NHPFLVGLHSCFQTESRLFFVIE   76 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc----CCCCCCceEEEEEcCCEEEEEEe
Confidence            46999999999999999999999999997432    22234556777776663    56889999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccc
Q 013973          179 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  257 (433)
Q Consensus       179 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~  257 (433)
                      |+ +++|.+++...+  .+++..++.++.||+.||.|||++||+||||||+|||++.++                     
T Consensus        77 ~~~~g~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~---------------------  133 (329)
T cd05588          77 FVSGGDLMFHMQRQR--KLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEG---------------------  133 (329)
T ss_pred             CCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC---------------------
Confidence            99 899999987654  799999999999999999999999999999999999995544                     


Q ss_pred             cCCCCCCEEEEecCCccccC---CCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 013973          258 RMPKSSAIKVIDFGSTTYER---PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  334 (433)
Q Consensus       258 ~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~  334 (433)
                            .+||+|||++....   ......+||+.|+|||++.+..++.++|+|||||++|+|++|..||......+.   
T Consensus       134 ------~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~---  204 (329)
T cd05588         134 ------HIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDN---  204 (329)
T ss_pred             ------CEEECcCccccccccCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccccccccc---
Confidence                  56666666554211   112335799999999999999999999999999999999999999964221000   


Q ss_pred             HHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCC
Q 013973          335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  414 (433)
Q Consensus       335 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  414 (433)
                              +...   ........+..+.                          ...+..++.++.+||.+||+.||.+|
T Consensus       205 --------~~~~---~~~~~~~~~~~~~--------------------------~~~p~~~~~~~~~li~~~L~~dP~~R  247 (329)
T cd05588         205 --------PDQN---TEDYLFQVILEKQ--------------------------IRIPRSLSVKASSVLKGFLNKDPKER  247 (329)
T ss_pred             --------cccc---chHHHHHHHHcCC--------------------------CCCCCCCCHHHHHHHHHHhccCHHHc
Confidence                    0000   0000000011111                          11234567789999999999999999


Q ss_pred             CC------HHHHhcCCCCCC
Q 013973          415 LT------AREALRHPFFTR  428 (433)
Q Consensus       415 ~t------a~ell~hp~f~~  428 (433)
                      ++      +.++++||||..
T Consensus       248 ~~~~~~~~~~~i~~hp~~~~  267 (329)
T cd05588         248 LGCHPQTGFRDIKSHPFFRN  267 (329)
T ss_pred             CCCCCCCCHHHHhcCCCCCC
Confidence            97      789999999975

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=1.6e-45  Score=356.59  Aligned_cols=244  Identities=28%  Similarity=0.424  Sum_probs=194.2

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecchh----hHHHHHHHHHH-HHHHHhcCCCCCceEEecceeecCCeEEEEE
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEV-LQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  177 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~~-l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~  177 (433)
                      +.||+|+||+||+|.+..+++.||+|++.....    .......|... ++.+     .|++|+++++.+...+.+|+||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l-----~hp~iv~~~~~~~~~~~~~lv~   75 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNV-----KHPFLVGLHYSFQTADKLYFVL   75 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhC-----CCCCCCCeeEEEEeCCEEEEEE
Confidence            479999999999999999999999999974321    11223333332 2333     6789999999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCccc
Q 013973          178 EKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  256 (433)
Q Consensus       178 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~  256 (433)
                      ||+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.                      
T Consensus        76 e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~----------------------  131 (323)
T cd05575          76 DYVNGGELFFHLQRER--SFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDS----------------------  131 (323)
T ss_pred             cCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECC----------------------
Confidence            999 899999998754  7999999999999999999999999999999999999954                      


Q ss_pred             ccCCCCCCEEEEecCCccccCC---CCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 013973          257 KRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA  333 (433)
Q Consensus       257 ~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~  333 (433)
                           ++.+||+|||++.....   .....+||+.|+|||++.+..++.++|||||||++|||++|..||...+..+...
T Consensus       132 -----~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~  206 (323)
T cd05575         132 -----QGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYD  206 (323)
T ss_pred             -----CCcEEEeccCCCcccccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHH
Confidence                 44566777776643211   1233579999999999999999999999999999999999999998766554433


Q ss_pred             HHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCC
Q 013973          334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  413 (433)
Q Consensus       334 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  413 (433)
                      .+..                       +...                          .....+.++.+||.+||+.||.+
T Consensus       207 ~i~~-----------------------~~~~--------------------------~~~~~~~~~~~li~~~l~~~p~~  237 (323)
T cd05575         207 NILN-----------------------KPLR--------------------------LKPNISVSARHLLEGLLQKDRTK  237 (323)
T ss_pred             HHHc-----------------------CCCC--------------------------CCCCCCHHHHHHHHHHhhcCHHh
Confidence            2211                       0000                          12245678999999999999999


Q ss_pred             CCCH----HHHhcCCCCCCC
Q 013973          414 RLTA----REALRHPFFTRD  429 (433)
Q Consensus       414 R~ta----~ell~hp~f~~~  429 (433)
                      ||++    .|+++||||...
T Consensus       238 R~~~~~~~~~il~~~~~~~~  257 (323)
T cd05575         238 RLGAKDDFLEIKNHVFFSSI  257 (323)
T ss_pred             CCCCCCCHHHHHcCCCcCCC
Confidence            9987    699999999753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=4.5e-45  Score=346.33  Aligned_cols=248  Identities=23%  Similarity=0.373  Sum_probs=196.3

Q ss_pred             eeccccEEEEEEEECCCCeEEEEEEeecchh----hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecC
Q 013973          105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  180 (433)
Q Consensus       105 iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~  180 (433)
                      ||+|+||+||+|.++.+++.||+|++.....    ..+.+..|+.+++.+     +|++++.+.+.+.....+|+||||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-----~~~~i~~~~~~~~~~~~~~lv~e~~   75 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKV-----HSRFIVSLAYAFQTKTDLCLVMTIM   75 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhC-----CCCcEeeeeEEEcCCCeEEEEEeCC
Confidence            7999999999999999999999999864321    223456788888888     6789999999999999999999999


Q ss_pred             -CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccc
Q 013973          181 -GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  257 (433)
Q Consensus       181 -~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~  257 (433)
                       +++|.+++...  ....+++..+..++.||+.||.|||++||+||||||+|||++.                       
T Consensus        76 ~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~-----------------------  132 (280)
T cd05608          76 NGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDN-----------------------  132 (280)
T ss_pred             CCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC-----------------------
Confidence             89999887542  2246999999999999999999999999999999999999944                       


Q ss_pred             cCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 013973          258 RMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  334 (433)
Q Consensus       258 ~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~  334 (433)
                          ++.++|+|||.+.......   ....||+.|+|||++.+..++.++|+|||||++|||++|+.||...+.......
T Consensus       133 ----~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~  208 (280)
T cd05608         133 ----DGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE  208 (280)
T ss_pred             ----CCCEEEeeCccceecCCCCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHH
Confidence                4557777777665432221   234789999999999999999999999999999999999999976443211111


Q ss_pred             HHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCC
Q 013973          335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  414 (433)
Q Consensus       335 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  414 (433)
                      +...                   +..+.                          ...+..++.++.+|+.+||+.||++|
T Consensus       209 ~~~~-------------------~~~~~--------------------------~~~~~~~~~~~~~li~~~l~~~P~~R  243 (280)
T cd05608         209 LKQR-------------------ILNDS--------------------------VTYPDKFSPASKSFCEALLAKDPEKR  243 (280)
T ss_pred             HHHh-------------------hcccC--------------------------CCCcccCCHHHHHHHHHHhcCCHHHh
Confidence            1000                   00000                          01123567789999999999999999


Q ss_pred             C-----CHHHHhcCCCCCCC
Q 013973          415 L-----TAREALRHPFFTRD  429 (433)
Q Consensus       415 ~-----ta~ell~hp~f~~~  429 (433)
                      |     +++++++||||++.
T Consensus       244 ~~~~~~~~~~~l~h~~~~~~  263 (280)
T cd05608         244 LGFRDGNCDGLRTHPLFRDL  263 (280)
T ss_pred             cCCCCCCHHHHhcChhhhcC
Confidence            9     89999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=3.7e-45  Score=354.98  Aligned_cols=254  Identities=22%  Similarity=0.388  Sum_probs=194.5

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEe
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  178 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e  178 (433)
                      +.||+|+||.||+|.+..+++.||+|+++...    ........|+.++..+    .+|++|+++++++...+.+|+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~----~~hp~iv~~~~~~~~~~~~~lv~E   76 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA----SNHPFLVGLHSCFQTESRLFFVIE   76 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhc----CCCCcCCceeeEEEeCCEEEEEEe
Confidence            47999999999999999999999999997432    2223345566666554    256889999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccc
Q 013973          179 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  257 (433)
Q Consensus       179 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~  257 (433)
                      |+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.                       
T Consensus        77 ~~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~-----------------------  131 (329)
T cd05618          77 YVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS-----------------------  131 (329)
T ss_pred             CCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECC-----------------------
Confidence            99 899999887654  7999999999999999999999999999999999999954                       


Q ss_pred             cCCCCCCEEEEecCCccccCC---CCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 013973          258 RMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  334 (433)
Q Consensus       258 ~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~  334 (433)
                          ++.+||+|||++.....   .....+||+.|+|||++.+..++.++|||||||++|||++|..||........   
T Consensus       132 ----~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~---  204 (329)
T cd05618         132 ----EGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN---  204 (329)
T ss_pred             ----CCCEEEeeCCccccccCCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCC---
Confidence                45567777776653211   12335799999999999999999999999999999999999999953211000   


Q ss_pred             HHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCC
Q 013973          335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  414 (433)
Q Consensus       335 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  414 (433)
                              +..   .........+.....                          ..+...+.++.+||.+||+.||++|
T Consensus       205 --------~~~---~~~~~~~~~i~~~~~--------------------------~~p~~~~~~~~~ll~~~L~~dP~~R  247 (329)
T cd05618         205 --------PDQ---NTEDYLFQVILEKQI--------------------------RIPRSLSVKAASVLKSFLNKDPKER  247 (329)
T ss_pred             --------ccc---ccHHHHHHHHhcCCC--------------------------CCCCCCCHHHHHHHHHHhcCCHHHc
Confidence                    000   000000000011111                          1234567789999999999999999


Q ss_pred             CC------HHHHhcCCCCCCC
Q 013973          415 LT------AREALRHPFFTRD  429 (433)
Q Consensus       415 ~t------a~ell~hp~f~~~  429 (433)
                      ++      +.++++||||++.
T Consensus       248 ~~~~~~~~~~~i~~hp~f~~~  268 (329)
T cd05618         248 LGCHPQTGFADIQGHPFFRNV  268 (329)
T ss_pred             CCCCCCCCHHHHhcCCCCCCC
Confidence            98      5799999999763

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=9e-45  Score=356.12  Aligned_cols=278  Identities=23%  Similarity=0.383  Sum_probs=202.0

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  176 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV  176 (433)
                      .+|++++.||+|+||.||+|.+..+++.||+|+....     ....|+.+++.+     +|+||+++++++......|+|
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv  135 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNV-----NHPSVIRMKDTLVSGAITCMV  135 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhC-----CCCCCcChhheEEeCCeeEEE
Confidence            4699999999999999999999999999999986432     234588888887     678999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCccc
Q 013973          177 FEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  256 (433)
Q Consensus       177 ~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~  256 (433)
                      ||++.++|.+++.... ..+++..+..++.||+.||.|||++|||||||||+|||++.                      
T Consensus       136 ~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~----------------------  192 (357)
T PHA03209        136 LPHYSSDLYTYLTKRS-RPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFIND----------------------  192 (357)
T ss_pred             EEccCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC----------------------
Confidence            9999889999987643 47999999999999999999999999999999999999944                      


Q ss_pred             ccCCCCCCEEEEecCCccccCCC--CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCC-CCCCCCh-----
Q 013973          257 KRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA-LFQTHEN-----  328 (433)
Q Consensus       257 ~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~-Pf~~~~~-----  328 (433)
                           ++.+||+|||.+......  .....||..|+|||++.+..++.++|||||||++|||+++.. +|.....     
T Consensus       193 -----~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~  267 (357)
T PHA03209        193 -----VDQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEY  267 (357)
T ss_pred             -----CCCEEEecCccccccccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHH
Confidence                 455777777766543221  223579999999999999999999999999999999998654 4443211     


Q ss_pred             ----HHHHHHHHHHhCCCCHHHHHHH-hhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          329 ----LEHLAMMERVLGPLPQHMLKRV-DRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       329 ----~~~~~~i~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                          ...+..+...++..|..+.... ......++........             ......   .......+.++.+||
T Consensus       268 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~---~~~~~~~~~~~~~li  331 (357)
T PHA03209        268 VKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQ-------------PYTRYP---CFQRVNLPIDGEFLV  331 (357)
T ss_pred             HHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCC-------------cccccH---HHhccCCCchHHHHH
Confidence                1222333333333332211000 0000001000000000             000000   000124566788999


Q ss_pred             HhccccCCCCCCCHHHHhcCCCCCC
Q 013973          404 QGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      .+||+.||.+||||.|||+||||++
T Consensus       332 ~~mL~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        332 HKMLTFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             HHHHcCCcccCcCHHHHhcCchhcc
Confidence            9999999999999999999999986

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=6.8e-45  Score=358.57  Aligned_cols=256  Identities=24%  Similarity=0.416  Sum_probs=203.7

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      ..++|++.+.||+|+||.||+|.++.+++.||+|++....    .....+..|+.+++.+     +|++|+++++.+...
T Consensus        41 ~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~-----~hp~iv~~~~~~~~~  115 (371)
T cd05622          41 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-----NSPWVVQLFYAFQDD  115 (371)
T ss_pred             chhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEEcC
Confidence            3478999999999999999999999999999999986422    1223345677777766     779999999999999


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      +.+|+||||+ |++|.+++...   .+++..+..++.||+.||+|||++||+||||||+|||++                
T Consensus       116 ~~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~----------------  176 (371)
T cd05622         116 RYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD----------------  176 (371)
T ss_pred             CEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEC----------------
Confidence            9999999999 89999998754   589999999999999999999999999999999999994                


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCC----CCceeecCcccchhhhhCCC----CCCcchhHHHHHHHHHHHhCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEA  321 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlGv~l~elltg~~  321 (433)
                                 .++.+||+|||++......    ....+||+.|+|||++.+..    ++.++|||||||++|||++|..
T Consensus       177 -----------~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~  245 (371)
T cd05622         177 -----------KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDT  245 (371)
T ss_pred             -----------CCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCC
Confidence                       4456777777776544322    12457999999999997643    7899999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       322 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      ||.+.+....+..+.....                     .+.+|.                        ...++.++++
T Consensus       246 Pf~~~~~~~~~~~i~~~~~---------------------~~~~~~------------------------~~~~s~~~~~  280 (371)
T cd05622         246 PFYADSLVGTYSKIMNHKN---------------------SLTFPD------------------------DNDISKEAKN  280 (371)
T ss_pred             CCCCCCHHHHHHHHHcCCC---------------------cccCCC------------------------cCCCCHHHHH
Confidence            9988766554443321110                     011111                        1246778999


Q ss_pred             HHHhccccCCCC--CCCHHHHhcCCCCCCCC
Q 013973          402 LLQGLLRYDPTD--RLTAREALRHPFFTRDH  430 (433)
Q Consensus       402 li~~~L~~dP~~--R~ta~ell~hp~f~~~~  430 (433)
                      ||.+||+.++.+  |++++|+++||||++..
T Consensus       281 li~~~L~~~~~r~~r~~~~ei~~h~~~~~~~  311 (371)
T cd05622         281 LICAFLTDREVRLGRNGVEEIKRHLFFKNDQ  311 (371)
T ss_pred             HHHHHcCChhhhcCCCCHHHHhcCcccCCCC
Confidence            999999844443  78999999999998753

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=100.00  E-value=6.2e-46  Score=333.62  Aligned_cols=295  Identities=28%  Similarity=0.484  Sum_probs=230.9

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCC----eEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERK----EMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~----~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      ...|++++.||+|.||.||+|..+.++    +.||||.++..+   .....+.+|+.+++.+     .|+|++.+...|.
T Consensus        23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl-----~h~nvi~Lv~Vfl   97 (438)
T KOG0666|consen   23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLREL-----KHPNVISLVKVFL   97 (438)
T ss_pred             HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHh-----cCCcchhHHHHHh
Confidence            356999999999999999999766554    379999997543   2345667899999999     6789999999987


Q ss_pred             c-CCeEEEEEecCCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCc
Q 013973          169 Y-RNHICIVFEKLGSSLYDFLRKNN---YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  244 (433)
Q Consensus       169 ~-~~~~~lV~e~~~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg  244 (433)
                      . +..+++|+||...+|...++-..   .+.++...++.|+.||+.|+.|||++-|+||||||.|||+..+|        
T Consensus        98 ~~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdg--------  169 (438)
T KOG0666|consen   98 SHDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDG--------  169 (438)
T ss_pred             ccCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccC--------
Confidence            7 88999999999999999886322   24689999999999999999999999999999999999997766        


Q ss_pred             CCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC------CceeecCcccchhhhhCCC-CCCcchhHHHHHHHHHHH
Q 013973          245 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELC  317 (433)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~ell  317 (433)
                                     .+.+.+||+|||+++.....-      ..++-|.+|.|||.+.+.. |+++.||||.|||+.||+
T Consensus       170 ---------------perG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElL  234 (438)
T KOG0666|consen  170 ---------------PERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELL  234 (438)
T ss_pred             ---------------CccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHH
Confidence                           677999999999998765432      3357799999999999865 999999999999999999


Q ss_pred             hCCCCCCCCC---------hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhcc-chhHHHH
Q 013973          318 TGEALFQTHE---------NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK-LPRLQNL  387 (433)
Q Consensus       318 tg~~Pf~~~~---------~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  387 (433)
                      |-.+.|.+.+         ..+++..|..++|.+....|+......+..-.-            ..+..... ...+...
T Consensus       235 tl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~l------------s~f~~~~~~n~sL~~~  302 (438)
T KOG0666|consen  235 TLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLL------------SDFRRHYYDNVSLHKY  302 (438)
T ss_pred             ccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHH------------HHhHHhhcCcchHHHH
Confidence            9999997643         245788899999998887777665433321000            00000000 0011111


Q ss_pred             HhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCCCCC
Q 013973          388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL  431 (433)
Q Consensus       388 ~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~~~  431 (433)
                      .. ....-++...+|+.+||++||.+|.|++|+|+|+||+.+++
T Consensus       303 ~~-~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~l  345 (438)
T KOG0666|consen  303 YH-KHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDPL  345 (438)
T ss_pred             HH-HhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCCC
Confidence            11 12233455899999999999999999999999999998865

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-44  Score=352.07  Aligned_cols=256  Identities=26%  Similarity=0.405  Sum_probs=201.0

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++++.||+|+||.||+|.+..+++.||+|++.+..    .....+..|+.++..+     +|++|+.+++.+...++
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~~~   75 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNG-----DRRWITNLHYAFQDENN   75 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-----CCCCCCceEEEEecCCe
Confidence            36999999999999999999999999999999997422    1233455677777665     67889999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +|+||||+ |++|.+++.+.. ..+++..++.++.||+.||+|||++||+||||||+|||++                  
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~------------------  136 (331)
T cd05597          76 LYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLD------------------  136 (331)
T ss_pred             EEEEEecCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEEC------------------
Confidence            99999999 999999997643 4699999999999999999999999999999999999994                  


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhC-----CCCCCcchhHHHHHHHHHHHhCCCC
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILG-----LGWTYPCDIWSVGCILVELCTGEAL  322 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~elltg~~P  322 (433)
                               .++.+||+|||++.......    ...+||+.|+|||++..     ..++.++|||||||++|+|++|..|
T Consensus       137 ---------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~P  207 (331)
T cd05597         137 ---------KNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETP  207 (331)
T ss_pred             ---------CCCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCC
Confidence                     44567777777765433221    22469999999999973     3578899999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       323 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      |.+.+..+....+....                     ..+..+.                       ....++.++++|
T Consensus       208 f~~~~~~~~~~~i~~~~---------------------~~~~~~~-----------------------~~~~~~~~~~~l  243 (331)
T cd05597         208 FYAESLVETYGKIMNHK---------------------EHFQFPP-----------------------DVTDVSEEAKDL  243 (331)
T ss_pred             CCCCCHHHHHHHHHcCC---------------------CcccCCC-----------------------ccCCCCHHHHHH
Confidence            98766554443322110                     0001110                       112357789999


Q ss_pred             HHhccccCCCC--CCCHHHHhcCCCCCCC
Q 013973          403 LQGLLRYDPTD--RLTAREALRHPFFTRD  429 (433)
Q Consensus       403 i~~~L~~dP~~--R~ta~ell~hp~f~~~  429 (433)
                      |++||+.++++  |+++.++++||||...
T Consensus       244 i~~ll~~~~~r~~r~~~~~~l~hp~~~~~  272 (331)
T cd05597         244 IRRLICSPETRLGRNGLQDFKDHPFFEGI  272 (331)
T ss_pred             HHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence            99999764444  7899999999999764

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=8.5e-45  Score=353.00  Aligned_cols=296  Identities=21%  Similarity=0.333  Sum_probs=209.3

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      .++|++.++||+|+||.||+|.+..++..+|+|++...  ......+..|+++++.+     +|+||+++++++...+++
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~   78 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC-----NSPYIVGFYGAFYSDGEI   78 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHC-----CCCcccceeEEEEECCEE
Confidence            36799999999999999999999999999999988643  23345677899999988     678999999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL-CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      |+||||+ +++|.+++...+  .+++..+..++.|++.||.|||+. +|+||||||+|||+++                 
T Consensus        79 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~-----------------  139 (333)
T cd06650          79 SICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS-----------------  139 (333)
T ss_pred             EEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcC-----------------
Confidence            9999999 899999998754  689999999999999999999985 7999999999999954                 


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCC-CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPD-QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                                ++.+||+|||++...... .....||..|+|||++.+..++.++|+|||||++|+|++|..||......+
T Consensus       140 ----------~~~~kL~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~  209 (333)
T cd06650         140 ----------RGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKE  209 (333)
T ss_pred             ----------CCCEEEeeCCcchhhhhhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhH
Confidence                      445677777766533221 233478999999999999899999999999999999999999998655433


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhh-hccCcccCCCCccchhhHhhhccchhHHHHHhhh-cCCchhHHHHHHHhccc
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKY-VRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH-VDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~  408 (433)
                      ....+.......+...    ....... .......+............... .......... ...++.++++||.+||+
T Consensus       210 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~L~  284 (333)
T cd06650         210 LELMFGCPVEGDPAES----ETSPRPRPPGRPLSSYGPDSRPPMAIFELLD-YIVNEPPPKLPSGVFGAEFQDFVNKCLI  284 (333)
T ss_pred             HHHHhcCcccCCcccc----ccCcccCCccchhhhhcccccccccHHHHHH-HHhcCCCccCCCCCcCHHHHHHHHHhcc
Confidence            3221111000000000    0000000 00000000000000000000000 0000000000 12356789999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCC
Q 013973          409 YDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       409 ~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      +||++|||+.|++.||||+...
T Consensus       285 ~~P~~Rpt~~ell~h~~~~~~~  306 (333)
T cd06650         285 KNPAERADLKQLMVHAFIKRSE  306 (333)
T ss_pred             CCcccCcCHHHHhhCHHHhcCc
Confidence            9999999999999999998764

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=1.6e-44  Score=348.36  Aligned_cols=284  Identities=26%  Similarity=0.484  Sum_probs=205.9

Q ss_pred             eeeeccccEEEEEEEECC--CCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee--cCCeEEEEEe
Q 013973          103 SKMGEGTFGQVLECWDRE--RKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD--YRNHICIVFE  178 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~--~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~--~~~~~~lV~e  178 (433)
                      .+||+|+||.||+|.++.  ++..||+|.+.... .......|+.+++.+     .|+|++++++++.  ....+++|||
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~~~lv~e   80 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-ISMSACREIALLREL-----KHPNVIALQKVFLSHSDRKVWLLFD   80 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCC-CcHHHHHHHHHHHhC-----CCCCeeeEEEEEeccCCCeEEEEEe
Confidence            689999999999999754  56789999987432 234567799999988     6788999999874  4568899999


Q ss_pred             cCCCCHHHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          179 KLGSSLYDFLRKNN-------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       179 ~~~~~L~~~l~~~~-------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      |++++|.+++....       ...+++..+..++.||+.||.|||+.|||||||||+|||+..++               
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~---------------  145 (317)
T cd07867          81 YAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG---------------  145 (317)
T ss_pred             eeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCC---------------
Confidence            99889988875321       13588999999999999999999999999999999999995332               


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCC------CceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCC
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                              +.++.+||+|||+++......      ....||+.|+|||++.+. .++.++|||||||++|||++|.+||.
T Consensus       146 --------~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~  217 (317)
T cd07867         146 --------PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH  217 (317)
T ss_pred             --------CCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcc
Confidence                    345678888888876543221      234789999999999874 58999999999999999999999997


Q ss_pred             CCCh---------HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCc
Q 013973          325 THEN---------LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS  395 (433)
Q Consensus       325 ~~~~---------~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (433)
                      ....         ...+..+...++......+..+............+...           ..................
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~  286 (317)
T cd07867         218 CRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRT-----------TYANSSLIKYMEKHKVKP  286 (317)
T ss_pred             cccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhccc-----------ccCCchhhhhhhcccCCC
Confidence            5432         23455566666766655554433221110000000000           000001111111122234


Q ss_pred             hhHHHHHHHhccccCCCCCCCHHHHhcCCCC
Q 013973          396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF  426 (433)
Q Consensus       396 ~~~~~~li~~~L~~dP~~R~ta~ell~hp~f  426 (433)
                      +..+.+||.+||+.||.+|||+.|+|+||||
T Consensus       287 ~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         287 DSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             ChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            5678999999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=8.6e-46  Score=327.43  Aligned_cols=254  Identities=24%  Similarity=0.395  Sum_probs=204.4

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ++.+++..||.|+.|.|++++.+.+|...|||.++..  +.+.+++...+.++...    +..|.||+++++|..+..+.
T Consensus        92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s----~dcpyIV~c~GyFi~n~dV~  167 (391)
T KOG0983|consen   92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKS----HDCPYIVQCFGYFITNTDVF  167 (391)
T ss_pred             HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhc----cCCCeeeeeeeEEeeCchHH
Confidence            4567889999999999999999999999999999743  34455566666665443    24689999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      |.||.|+..+..+|.... .++++..+-.+...++.||.||.+ +||||||+||+|||+                     
T Consensus       168 IcMelMs~C~ekLlkrik-~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILl---------------------  225 (391)
T KOG0983|consen  168 ICMELMSTCAEKLLKRIK-GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---------------------  225 (391)
T ss_pred             HHHHHHHHHHHHHHHHhc-CCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEE---------------------
Confidence            999999777777666543 579999999999999999999985 689999999999999                     


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCC---CCCCcchhHHHHHHHHHHHhCCCCCCCCC-
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTHE-  327 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlGv~l~elltg~~Pf~~~~-  327 (433)
                            |+.+++||||||++...-+..  +...|.+.|||||.+.-.   .|+.++||||||+.++||.||.+||.+.+ 
T Consensus       226 ------De~GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~t  299 (391)
T KOG0983|consen  226 ------DERGNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKT  299 (391)
T ss_pred             ------ccCCCEEeecccccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCc
Confidence                  556678888888775443332  345899999999999743   59999999999999999999999999865 


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      +.+.+..+..   ..|+.+                   |                        ....+|+++++|+..||
T Consensus       300 dFe~ltkvln---~ePP~L-------------------~------------------------~~~gFSp~F~~fv~~CL  333 (391)
T KOG0983|consen  300 DFEVLTKVLN---EEPPLL-------------------P------------------------GHMGFSPDFQSFVKDCL  333 (391)
T ss_pred             cHHHHHHHHh---cCCCCC-------------------C------------------------cccCcCHHHHHHHHHHh
Confidence            4444444333   222110                   0                        11247899999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCC
Q 013973          408 RYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       408 ~~dP~~R~ta~ell~hp~f~~  428 (433)
                      ++|+.+||...++|+|||...
T Consensus       334 ~kd~r~RP~Y~~Ll~h~Fi~~  354 (391)
T KOG0983|consen  334 TKDHRKRPKYNKLLEHPFIKR  354 (391)
T ss_pred             hcCcccCcchHHHhcCcceee
Confidence            999999999999999999864

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=7.4e-45  Score=345.80  Aligned_cols=256  Identities=26%  Similarity=0.409  Sum_probs=203.9

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      .|++.+.||+|+||.||+|.+..+++.||+|.+....    ........|+.+++.+     .|++++.+.+.+.+.+.+
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-----~~~~i~~~~~~~~~~~~~   75 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKV-----NSRFVVSLAYAYETKDAL   75 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhC-----CCCCeeeeeEEEecCCEE
Confidence            3788899999999999999999999999999986432    1223456788888887     568899999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      |+||||+ +++|.+++.......+++..+..++.|++.||.|||+.||+||||||+||+++.                  
T Consensus        76 ~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~------------------  137 (285)
T cd05630          76 CLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDD------------------  137 (285)
T ss_pred             EEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECC------------------
Confidence            9999999 899999987655557999999999999999999999999999999999999944                  


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                               ++.++|+|||++.......  ....||..|+|||++.+..++.++|+|||||++|+|++|..||.......
T Consensus       138 ---------~~~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~  208 (285)
T cd05630         138 ---------HGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI  208 (285)
T ss_pred             ---------CCCEEEeeccceeecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc
Confidence                     4557777777665433222  22468999999999999999999999999999999999999997643211


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ...........                                             .....+..+++++.+||.+||+.|
T Consensus       209 ~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~~~~li~~~l~~~  243 (285)
T cd05630         209 KREEVERLVKE---------------------------------------------VQEEYSEKFSPDARSLCKMLLCKD  243 (285)
T ss_pred             hHHHHHhhhhh---------------------------------------------hhhhcCccCCHHHHHHHHHHhhcC
Confidence            11111000000                                             000122356778999999999999


Q ss_pred             CCCCCC-----HHHHhcCCCCCCCC
Q 013973          411 PTDRLT-----AREALRHPFFTRDH  430 (433)
Q Consensus       411 P~~R~t-----a~ell~hp~f~~~~  430 (433)
                      |++|||     +.|+++||||++-.
T Consensus       244 p~~R~s~~~~~~~~~~~h~~~~~~~  268 (285)
T cd05630         244 PKERLGCQGGGAREVKEHPLFKQIN  268 (285)
T ss_pred             HHHccCCCCCchHHHHcChhhhccC
Confidence            999999     99999999998643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=6.5e-46  Score=356.46  Aligned_cols=251  Identities=27%  Similarity=0.494  Sum_probs=220.7

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeec---chhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe-
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH-  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~-  172 (433)
                      ++|..++.||+|+||.+++++++..++.||+|.++.   ....+.....|+.+++++     .||+|+.+.+.|..++. 
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~-----~hP~iv~y~ds~~~~~~~   78 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKL-----LHPNIVEYKDSFEEDGQL   78 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhc-----cCCCeeeeccchhcCCce
Confidence            569999999999999999999999999999999963   334556778899999998     67999999999998887 


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +||||+|| ||+|.+.+.+..+.-|+++.+..|+.|++.|+.|||++.|+|||||+.||+++                  
T Consensus        79 l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Niflt------------------  140 (426)
T KOG0589|consen   79 LCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLT------------------  140 (426)
T ss_pred             EEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhcc------------------
Confidence            99999999 99999999887767899999999999999999999999999999999999994                  


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                               ++..+||+|||+|+...+..   .+++||+.||.||++.+.+|+.++|||||||++|||++-+.+|++.+.
T Consensus       141 ---------k~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m  211 (426)
T KOG0589|consen  141 ---------KDKKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM  211 (426)
T ss_pred             ---------ccCceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch
Confidence                     55567888888888766654   457899999999999999999999999999999999999999999888


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      ......|.+....                                                +.+..++.+++.+|..||+
T Consensus       212 ~~Li~ki~~~~~~------------------------------------------------Plp~~ys~el~~lv~~~l~  243 (426)
T KOG0589|consen  212 SELILKINRGLYS------------------------------------------------PLPSMYSSELRSLVKSMLR  243 (426)
T ss_pred             HHHHHHHhhccCC------------------------------------------------CCCccccHHHHHHHHHHhh
Confidence            7776665554311                                                1234667899999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCC
Q 013973          409 YDPTDRLTAREALRHPFFT  427 (433)
Q Consensus       409 ~dP~~R~ta~ell~hp~f~  427 (433)
                      .+|..||+|.++|.+|.+.
T Consensus       244 ~~P~~RPsa~~LL~~P~l~  262 (426)
T KOG0589|consen  244 KNPEHRPSALELLRRPHLL  262 (426)
T ss_pred             cCCccCCCHHHHhhChhhh
Confidence            9999999999999998875

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=2.7e-44  Score=352.42  Aligned_cols=292  Identities=26%  Similarity=0.438  Sum_probs=224.4

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|++...   .........|+.+++.+     .|+|++++++.+...
T Consensus        13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~   87 (353)
T cd07850          13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLV-----NHKNIIGLLNVFTPQ   87 (353)
T ss_pred             hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhc-----CCCCCcceeeeeccC
Confidence            3467899999999999999999999999999999998532   22334566788888888     678899999887543


Q ss_pred             ------CeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCc
Q 013973          171 ------NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  244 (433)
Q Consensus       171 ------~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg  244 (433)
                            ...|+||||++++|.+++..    .+++..+..++.|++.||+|||++||+||||||+|||++.+         
T Consensus        88 ~~~~~~~~~~lv~e~~~~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~---------  154 (353)
T cd07850          88 KSLEEFQDVYLVMELMDANLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD---------  154 (353)
T ss_pred             CCccccCcEEEEEeccCCCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCC---------
Confidence                  46799999998899998864    38999999999999999999999999999999999999544         


Q ss_pred             CCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCC
Q 013973          245 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL  322 (433)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P  322 (433)
                                        +.+||+|||.+.......  ....||..|+|||++.+..++.++|||||||++|+|++|..|
T Consensus       155 ------------------~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~p  216 (353)
T cd07850         155 ------------------CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVL  216 (353)
T ss_pred             ------------------CCEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCC
Confidence                              456666666665433221  224688999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       323 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      |...+.......+...++..+.++..........+..........      .+....................+..+.+|
T Consensus       217 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  290 (353)
T cd07850         217 FPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGY------SFEELFPDVLFPPDSESHNKLKASQARDL  290 (353)
T ss_pred             CCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCc------chhhhCcccccCcccccccccchhHHHHH
Confidence            999888888888889999998888777766555554332110000      00000000000000000122456678999


Q ss_pred             HHhccccCCCCCCCHHHHhcCCCCC
Q 013973          403 LQGLLRYDPTDRLTAREALRHPFFT  427 (433)
Q Consensus       403 i~~~L~~dP~~R~ta~ell~hp~f~  427 (433)
                      |.+||+.||++|||+.|+|.||||.
T Consensus       291 i~~~L~~dP~~R~t~~eiL~~~~~~  315 (353)
T cd07850         291 LSKMLVIDPEKRISVDDALQHPYIN  315 (353)
T ss_pred             HHHHcCCChhhCcCHHHHhcChhHh
Confidence            9999999999999999999999886

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=3.6e-44  Score=340.47  Aligned_cols=277  Identities=31%  Similarity=0.510  Sum_probs=211.6

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      +|++++.||+|++|.||+|++..+++.||+|.++...   ........|+.+++.+     .|++++++++.+..++.+|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~   75 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKEL-----QHPNIVCLQDVLMQESRLY   75 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhc-----CCCCEeeeEEEEeeCCeEE
Confidence            4899999999999999999999999999999986322   2234567788888888     5789999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKLGSSLYDFLRKNNY-RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +||||+.++|.+++..... ..+++..+..++.||+.||.|||+.||+|+||||+|||+++++.+               
T Consensus        76 ~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~---------------  140 (285)
T cd07861          76 LIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVI---------------  140 (285)
T ss_pred             EEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcE---------------
Confidence            9999998899998875432 468999999999999999999999999999999999999665554               


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCChH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENL  329 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~  329 (433)
                                  +|+|||++.......   ....+++.|+|||++.+. .++.++|+|||||++|+|++|++||.+....
T Consensus       141 ------------~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~  208 (285)
T cd07861         141 ------------KLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEI  208 (285)
T ss_pred             ------------EECcccceeecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHH
Confidence                        455555443222111   122568899999998764 4789999999999999999999999988777


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +....+...++......++....... +...    .+.               ............++.++.+||.+||+.
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~---------------~~~~~~~~~~~~~~~~~~~li~~~l~~  268 (285)
T cd07861         209 DQLFRIFRILGTPTEDVWPGVTSLPD-YKNT----FPK---------------WKKGSLRSAVKNLDEDGLDLLEKMLIY  268 (285)
T ss_pred             HHHHHHHHHhCCCChhhhhcchhhHH-HHhh----ccc---------------cCcchhHHhcCCCCHHHHHHHHHHhcC
Confidence            76666666666655444332221111 0000    000               000011112345788999999999999


Q ss_pred             CCCCCCCHHHHhcCCCC
Q 013973          410 DPTDRLTAREALRHPFF  426 (433)
Q Consensus       410 dP~~R~ta~ell~hp~f  426 (433)
                      ||++|||+.+|+.||||
T Consensus       269 dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         269 DPAKRISAKKALNHPYF  285 (285)
T ss_pred             ChhhCCCHHHHhcCCCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=2.3e-45  Score=354.81  Aligned_cols=244  Identities=28%  Similarity=0.478  Sum_probs=199.6

Q ss_pred             eeeeccccEEEEEEEE---CCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEE
Q 013973          103 SKMGEGTFGQVLECWD---RERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  176 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~---~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV  176 (433)
                      +.||+|+||.||++.+   ..+++.||+|+++...   ........|+++++++     +|+||+++++.+...+.+|+|
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~lv   76 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEV-----NHPFIVKLHYAFQTEGKLYLI   76 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhC-----CCCCcccEEEEEEcCCEEEEE
Confidence            6799999999999976   3578999999997432   2233456788888887     678999999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          177 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       177 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      |||+ +++|.+++.+..  .+++..+..++.||+.||.|||++||+||||||+|||++                      
T Consensus        77 ~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~----------------------  132 (318)
T cd05582          77 LDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD----------------------  132 (318)
T ss_pred             EcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEEC----------------------
Confidence            9999 899999997654  699999999999999999999999999999999999994                      


Q ss_pred             cccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHH
Q 013973          256 FKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL  332 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~  332 (433)
                           .++.+||+|||++......   ....+||+.|+|||++.+..++.++|||||||++|||++|..||...+..+..
T Consensus       133 -----~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~  207 (318)
T cd05582         133 -----EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETM  207 (318)
T ss_pred             -----CCCcEEEeeccCCcccCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHH
Confidence                 4456777777776543322   12357999999999999988999999999999999999999999877665544


Q ss_pred             HHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCC
Q 013973          333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPT  412 (433)
Q Consensus       333 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  412 (433)
                      ..+...                       ...                          .+..++.++.+||.+||+.||+
T Consensus       208 ~~i~~~-----------------------~~~--------------------------~p~~~~~~~~~li~~~l~~~P~  238 (318)
T cd05582         208 TMILKA-----------------------KLG--------------------------MPQFLSPEAQSLLRALFKRNPA  238 (318)
T ss_pred             HHHHcC-----------------------CCC--------------------------CCCCCCHHHHHHHHHHhhcCHh
Confidence            332211                       111                          1234567899999999999999


Q ss_pred             CCCC-----HHHHhcCCCCCCC
Q 013973          413 DRLT-----AREALRHPFFTRD  429 (433)
Q Consensus       413 ~R~t-----a~ell~hp~f~~~  429 (433)
                      +||+     +.+++.||||+..
T Consensus       239 ~R~~a~~~~~~~~~~~~~~~~~  260 (318)
T cd05582         239 NRLGAGPDGVEEIKRHPFFSTI  260 (318)
T ss_pred             HcCCCCCCCHHHHhCCCCcCCC
Confidence            9999     7789999999753

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=4.3e-45  Score=353.96  Aligned_cols=244  Identities=27%  Similarity=0.386  Sum_probs=193.9

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHH-HHHHHhcCCCCCceEEecceeecCCeEEEEE
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEV-LQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  177 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~-l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~  177 (433)
                      +.||+|+||+||+|.++.+++.||+|++....    ........|..+ ++.+     .|+||+++++.+...+.+|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-----~hp~iv~~~~~~~~~~~~~lv~   75 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNV-----KHPFLVGLHYSFQTTEKLYFVL   75 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhC-----CCCCCccEEEEEecCCEEEEEE
Confidence            46999999999999999999999999997432    122233334333 2333     6789999999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCccc
Q 013973          178 EKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  256 (433)
Q Consensus       178 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~  256 (433)
                      ||+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.                      
T Consensus        76 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~----------------------  131 (325)
T cd05604          76 DFVNGGELFFHLQRER--SFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDS----------------------  131 (325)
T ss_pred             cCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC----------------------
Confidence            999 899999987654  7999999999999999999999999999999999999954                      


Q ss_pred             ccCCCCCCEEEEecCCccccC---CCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 013973          257 KRMPKSSAIKVIDFGSTTYER---PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA  333 (433)
Q Consensus       257 ~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~  333 (433)
                           ++.+||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|||++|..||...+..+.+.
T Consensus       132 -----~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~  206 (325)
T cd05604         132 -----QGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYD  206 (325)
T ss_pred             -----CCCEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHH
Confidence                 4556777777665321   11234579999999999999999999999999999999999999998766554433


Q ss_pred             HHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCC
Q 013973          334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  413 (433)
Q Consensus       334 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  413 (433)
                      .+..                       +...                          .....+..+.++|.+||+.||.+
T Consensus       207 ~~~~-----------------------~~~~--------------------------~~~~~~~~~~~ll~~ll~~~p~~  237 (325)
T cd05604         207 NILH-----------------------KPLV--------------------------LRPGASLTAWSILEELLEKDRQR  237 (325)
T ss_pred             HHHc-----------------------CCcc--------------------------CCCCCCHHHHHHHHHHhccCHHh
Confidence            2211                       0000                          11245667899999999999999


Q ss_pred             CCCH----HHHhcCCCCCCC
Q 013973          414 RLTA----REALRHPFFTRD  429 (433)
Q Consensus       414 R~ta----~ell~hp~f~~~  429 (433)
                      ||++    .+++.||||...
T Consensus       238 R~~~~~~~~~i~~h~~f~~~  257 (325)
T cd05604         238 RLGAKEDFLEIQEHPFFESL  257 (325)
T ss_pred             cCCCCCCHHHHhcCCCcCCC
Confidence            9976    599999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=8.2e-45  Score=351.99  Aligned_cols=243  Identities=27%  Similarity=0.433  Sum_probs=192.9

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecchhh----HHHHHHHHHH-HHHHHhcCCCCCceEEecceeecCCeEEEEE
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY----REAAMIEIEV-LQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  177 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~----~~~~~~E~~~-l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~  177 (433)
                      +.||+|+||.||+|++..+++.||+|++......    ......|... ++.+     .|++|+++++.+...+.+|+||
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-----~h~~Iv~~~~~~~~~~~~~lv~   75 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV-----KHPFLVGLHFSFQTADKLYFVL   75 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhC-----CCCCCCceeEEEEcCCeEEEEE
Confidence            4799999999999999999999999999743211    1122223322 3333     6789999999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCccc
Q 013973          178 EKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  256 (433)
Q Consensus       178 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~  256 (433)
                      ||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+                     
T Consensus        76 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~---------------------  132 (325)
T cd05602          76 DYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQ---------------------  132 (325)
T ss_pred             eCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC---------------------
Confidence            999 889999998754  68999999999999999999999999999999999999544                     


Q ss_pred             ccCCCCCCEEEEecCCccccCC---CCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 013973          257 KRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA  333 (433)
Q Consensus       257 ~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~  333 (433)
                            +.+||+|||++.....   .....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+.
T Consensus       133 ------~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~  206 (325)
T cd05602         133 ------GHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYD  206 (325)
T ss_pred             ------CCEEEccCCCCcccccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHH
Confidence                  4566666666543211   1233579999999999999999999999999999999999999998766655443


Q ss_pred             HHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCC
Q 013973          334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  413 (433)
Q Consensus       334 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  413 (433)
                      .+....                                                 .......+.++.++|.+||+.||.+
T Consensus       207 ~i~~~~-------------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~  237 (325)
T cd05602         207 NILNKP-------------------------------------------------LQLKPNITNSARHLLEGLLQKDRTK  237 (325)
T ss_pred             HHHhCC-------------------------------------------------cCCCCCCCHHHHHHHHHHcccCHHH
Confidence            322100                                                 0112356778999999999999999


Q ss_pred             CCCHH----HHhcCCCCCC
Q 013973          414 RLTAR----EALRHPFFTR  428 (433)
Q Consensus       414 R~ta~----ell~hp~f~~  428 (433)
                      |+++.    ++++|+||..
T Consensus       238 R~~~~~~~~~i~~~~~~~~  256 (325)
T cd05602         238 RLGAKDDFMEIKNHIFFSP  256 (325)
T ss_pred             CCCCCCCHHHHhcCcccCC
Confidence            99876    8999999965

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=3e-44  Score=341.01  Aligned_cols=276  Identities=29%  Similarity=0.480  Sum_probs=211.8

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      +|++.+.||+|+||.||+|++..+|+.||+|.++...   ........|+.+++.+     +|++++++++++.+...++
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l-----~h~~i~~~~~~~~~~~~~~   75 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-----KHKNIVRLYDVLHSDKKLT   75 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhc-----CCCCeeeHHHHhccCCceE
Confidence            4899999999999999999999999999999986421   1224456789999888     6789999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          175 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       175 lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      +|+||++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.                 
T Consensus        76 lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~-----------------  137 (284)
T cd07839          76 LVFEYCDQDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGE-----------------  137 (284)
T ss_pred             EEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCc-----------------
Confidence            999999889999887643 36999999999999999999999999999999999999965554                 


Q ss_pred             ccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCC-CCCcchhHHHHHHHHHHHhCCCCC-CCCChH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALF-QTHENL  329 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~Pf-~~~~~~  329 (433)
                                ++|+|||.+.......   ....++..|+|||++.+.. ++.++|||||||++|+|++|..|| .+.+..
T Consensus       138 ----------~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~  207 (284)
T cd07839         138 ----------LKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD  207 (284)
T ss_pred             ----------EEECccchhhccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHH
Confidence                      5555555444322111   1235788999999987754 789999999999999999988774 556666


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +.+..+.+.++..+...+..........      .++...   .           .....+....++.++.+||.+||+.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~---~-----------~~~~~~~~~~~~~~~~~li~~~l~~  267 (284)
T cd07839         208 DQLKRIFRLLGTPTEESWPGVSKLPDYK------PYPMYP---A-----------TTSLVNVVPKLNSTGRDLLQNLLVC  267 (284)
T ss_pred             HHHHHHHHHhCCCChHHhHHhhhccccc------ccCCCC---C-----------cchhhhhcccCCHHHHHHHHHHhcC
Confidence            6777777777776665544333221110      000000   0           0000122345778999999999999


Q ss_pred             CCCCCCCHHHHhcCCCC
Q 013973          410 DPTDRLTAREALRHPFF  426 (433)
Q Consensus       410 dP~~R~ta~ell~hp~f  426 (433)
                      ||.+|||++|++.||||
T Consensus       268 ~P~~R~t~~~il~h~~f  284 (284)
T cd07839         268 NPVQRISAEEALQHPYF  284 (284)
T ss_pred             ChhhcCCHHHHhcCCCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=100.00  E-value=9.4e-46  Score=351.93  Aligned_cols=323  Identities=33%  Similarity=0.595  Sum_probs=259.2

Q ss_pred             cCCCCCCceeecCceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCC-CCC
Q 013973           80 EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK-GGN  158 (433)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~-~~~  158 (433)
                      .++..|.|.+.+++.+.++|.+....|+|-|++|.+|.+...|..||||+|+......+.-..|+++|++|..... +-.
T Consensus       415 WdDaEGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~  494 (752)
T KOG0670|consen  415 WDDAEGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKF  494 (752)
T ss_pred             cccccceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhh
Confidence            3556789999999999999999999999999999999999999999999999888888888899999999976643 345


Q ss_pred             ceEEecceeecCCeEEEEEecCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCc
Q 013973          159 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNY-RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEY  237 (433)
Q Consensus       159 ~i~~~~~~~~~~~~~~lV~e~~~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~  237 (433)
                      ||+.++..|...+++|||||-+..+|.+.|.+.+. -.|....++.|+.|++.||..|-..||+|.||||+|||+++   
T Consensus       495 Hclrl~r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE---  571 (752)
T KOG0670|consen  495 HCLRLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNE---  571 (752)
T ss_pred             HHHHHHHHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEecc---
Confidence            79999999999999999999999999999987653 45888999999999999999999999999999999999964   


Q ss_pred             cccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCc-eeecCcccchhhhhCCCCCCcchhHHHHHHHHHH
Q 013973          238 IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY-IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL  316 (433)
Q Consensus       238 ~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~-~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el  316 (433)
                                             ....+||||||.|.......-+ +.-+..|.|||++.|-+|+...|+||.||+||||
T Consensus       572 -----------------------~k~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYEl  628 (752)
T KOG0670|consen  572 -----------------------SKNILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYEL  628 (752)
T ss_pred             -----------------------CcceeeeccCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEe
Confidence                                   4457899999999877655432 3446789999999999999999999999999999


Q ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCc-cchhhHhhhccc----hhHHHHHhh-
Q 013973          317 CTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGA-ASRESIKSVMKL----PRLQNLIMQ-  390 (433)
Q Consensus       317 ltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~-  390 (433)
                      .||+..|.+.++.+.+..+..+-|.+|..|+.+.+=.-..|-..-.+.+-+.. .+......++..    ..+...+.. 
T Consensus       629 YtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~  708 (752)
T KOG0670|consen  629 YTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAV  708 (752)
T ss_pred             eccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhcc
Confidence            99999999999999999999999999999887654322222222222111111 111111111111    111111111 


Q ss_pred             --hcC---CchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          391 --HVD---HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       391 --~~~---~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                        +++   ..-..+++||.+||..||++|.|..|+|.||||+.
T Consensus       709 q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  709 QRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             CCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence              111   23356899999999999999999999999999985

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.4e-45  Score=355.45  Aligned_cols=246  Identities=27%  Similarity=0.476  Sum_probs=193.1

Q ss_pred             eeccccEEEEEEEECCCCeEEEEEEeecchh----hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecC
Q 013973          105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  180 (433)
Q Consensus       105 iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~  180 (433)
                      ||+|+||+||+|+++.+++.||+|++.....    .......|..++....  ..+|++|+.++..+.....+|+||||+
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~--~~~~p~i~~~~~~~~~~~~~~lv~e~~   78 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTL--LDESPFIVGLKFSFQTDSDLYLVTDYM   78 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhc--cCCCCcCcceEEEEecCCeEEEEEcCC
Confidence            7999999999999999999999999864321    1122334555554442  125789999999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccC
Q 013973          181 -GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM  259 (433)
Q Consensus       181 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~  259 (433)
                       +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.                         
T Consensus        79 ~~g~L~~~l~~~~--~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~-------------------------  131 (330)
T cd05586          79 SGGELFWHLQKEG--RFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDA-------------------------  131 (330)
T ss_pred             CCChHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC-------------------------
Confidence             899999998654  7999999999999999999999999999999999999954                         


Q ss_pred             CCCCCEEEEecCCccccCC---CCCceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 013973          260 PKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM  335 (433)
Q Consensus       260 ~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~i  335 (433)
                        ++.++|+|||++.....   .....+||+.|+|||++.+. .++.++|||||||++|+|++|..||...+..+....+
T Consensus       132 --~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i  209 (330)
T cd05586         132 --TGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNI  209 (330)
T ss_pred             --CCCEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHH
Confidence              44567777776643221   12335799999999999764 4899999999999999999999999876654433322


Q ss_pred             HHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCC
Q 013973          336 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  415 (433)
Q Consensus       336 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  415 (433)
                      .                       .+....+.                         ..++.++.+||.+||+.||.+||
T Consensus       210 ~-----------------------~~~~~~~~-------------------------~~~~~~~~~li~~~L~~~P~~R~  241 (330)
T cd05586         210 A-----------------------FGKVRFPK-------------------------NVLSDEGRQFVKGLLNRNPQHRL  241 (330)
T ss_pred             H-----------------------cCCCCCCC-------------------------ccCCHHHHHHHHHHcCCCHHHCC
Confidence            1                       11111111                         13567889999999999999998


Q ss_pred             ----CHHHHhcCCCCCCC
Q 013973          416 ----TAREALRHPFFTRD  429 (433)
Q Consensus       416 ----ta~ell~hp~f~~~  429 (433)
                          ++.|+++||||.+.
T Consensus       242 ~~~~~~~~ll~h~~~~~~  259 (330)
T cd05586         242 GAHRDAVELKEHPFFADI  259 (330)
T ss_pred             CCCCCHHHHhcCccccCC
Confidence                79999999999753

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=1.9e-44  Score=349.72  Aligned_cols=252  Identities=22%  Similarity=0.399  Sum_probs=195.3

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEe
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  178 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e  178 (433)
                      +.||+|+||.||+|.+..+++.||+|+++...    .....+..|+.++.++.    +|++|+.+++++...+.+|+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~----~~~~i~~~~~~~~~~~~~~lv~e   76 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQAS----SNPFLVGLHSCFQTTSRLFLVIE   76 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhc----CCCCEeeEEEEEEeCCEEEEEEe
Confidence            47999999999999999999999999997432    22334556777776663    46789999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccc
Q 013973          179 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  257 (433)
Q Consensus       179 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~  257 (433)
                      |+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.                       
T Consensus        77 ~~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~-----------------------  131 (327)
T cd05617          77 YVNGGDLMFHMQRQR--KLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDA-----------------------  131 (327)
T ss_pred             CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeC-----------------------
Confidence            99 999999987654  7999999999999999999999999999999999999954                       


Q ss_pred             cCCCCCCEEEEecCCccccC---CCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 013973          258 RMPKSSAIKVIDFGSTTYER---PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  334 (433)
Q Consensus       258 ~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~  334 (433)
                          ++.+||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|||++|..||.......... 
T Consensus       132 ----~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~-  206 (327)
T cd05617         132 ----DGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMN-  206 (327)
T ss_pred             ----CCCEEEeccccceeccCCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccc-
Confidence                4456677777665321   11233579999999999999999999999999999999999999996432110000 


Q ss_pred             HHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCC
Q 013973          335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  414 (433)
Q Consensus       335 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  414 (433)
                             .......        .+....                          ...+...+..+.++|.+||+.||.+|
T Consensus       207 -------~~~~~~~--------~~~~~~--------------------------~~~p~~~~~~~~~li~~~L~~dP~~R  245 (327)
T cd05617         207 -------TEDYLFQ--------VILEKP--------------------------IRIPRFLSVKASHVLKGFLNKDPKER  245 (327)
T ss_pred             -------cHHHHHH--------HHHhCC--------------------------CCCCCCCCHHHHHHHHHHhccCHHHc
Confidence                   0000000        000000                          11233567789999999999999999


Q ss_pred             CC------HHHHhcCCCCCCC
Q 013973          415 LT------AREALRHPFFTRD  429 (433)
Q Consensus       415 ~t------a~ell~hp~f~~~  429 (433)
                      ++      ..+++.||||...
T Consensus       246 ~~~~~~~~~~~i~~h~~f~~~  266 (327)
T cd05617         246 LGCQPQTGFSDIKSHTFFRSI  266 (327)
T ss_pred             CCCCCCCCHHHHHcCCCCCCC
Confidence            98      5799999999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=2.1e-44  Score=350.23  Aligned_cols=256  Identities=25%  Similarity=0.399  Sum_probs=200.2

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh----hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|+++++||+|+||.||+++++.+++.||+|++.+...    ....+..|+.++..+     .|++|+.+++.+.+.+.
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~~~   75 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-----DNQWITTLHYAFQDENN   75 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhC-----CCCCEeeEEEEEecCCE
Confidence            369999999999999999999999999999999864221    222345566666655     67889999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +|+||||+ +|+|.+++.+.. ..+++..++.++.||+.||+|||++||+||||||+|||++                  
T Consensus        76 ~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~------------------  136 (332)
T cd05623          76 LYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD------------------  136 (332)
T ss_pred             EEEEEeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEC------------------
Confidence            99999999 999999998643 3689999999999999999999999999999999999994                  


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhh-----CCCCCCcchhHHHHHHHHHHHhCCCC
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGEAL  322 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~P  322 (433)
                               .++.+||+|||++.......    ...+||+.|+|||++.     ...++.++|||||||++|||++|+.|
T Consensus       137 ---------~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~P  207 (332)
T cd05623         137 ---------MNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETP  207 (332)
T ss_pred             ---------CCCCEEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCC
Confidence                     44567777777665332211    2247999999999997     34588999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       323 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      |...+..+.+..+....                     ....+|.                       .....+.++.+|
T Consensus       208 f~~~~~~~~~~~i~~~~---------------------~~~~~p~-----------------------~~~~~s~~~~~l  243 (332)
T cd05623         208 FYAESLVETYGKIMNHK---------------------ERFQFPA-----------------------QVTDVSEDAKDL  243 (332)
T ss_pred             CCCCCHHHHHHHHhCCC---------------------ccccCCC-----------------------ccccCCHHHHHH
Confidence            98776655444332110                     0011111                       112457789999


Q ss_pred             HHhccccCCCC--CCCHHHHhcCCCCCCC
Q 013973          403 LQGLLRYDPTD--RLTAREALRHPFFTRD  429 (433)
Q Consensus       403 i~~~L~~dP~~--R~ta~ell~hp~f~~~  429 (433)
                      |.+||+.++.+  |+++.|+++||||+..
T Consensus       244 i~~ll~~~~~r~~r~~~~~~~~h~~f~~~  272 (332)
T cd05623         244 IRRLICSREHRLGQNGIEDFKQHPFFTGI  272 (332)
T ss_pred             HHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence            99999765554  6899999999999864

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=2.5e-44  Score=342.18  Aligned_cols=256  Identities=25%  Similarity=0.387  Sum_probs=206.2

Q ss_pred             EEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           99 YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      |+..+.||+|+||+||+|.+..+++.||+|++....    ........|+.+++.+     .|++++.+.+.+..++..|
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-----~~~~i~~~~~~~~~~~~~~   76 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKV-----NSQFVVNLAYAYETKDALC   76 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHc-----CCcCceeEEEEEecCCEEE
Confidence            788899999999999999999999999999986432    1223456788998888     5688999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +||||+ +++|.+++...+...+++..+..++.|++.||.|||+.||+||||||+||++++                   
T Consensus        77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~-------------------  137 (285)
T cd05632          77 LVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDD-------------------  137 (285)
T ss_pred             EEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECC-------------------
Confidence            999999 889999887655557999999999999999999999999999999999999944                   


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                              ++.++|+|||++.......  ....||..|+|||++.+..++.++|+|||||++|+|++|..||........
T Consensus       138 --------~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~  209 (285)
T cd05632         138 --------YGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK  209 (285)
T ss_pred             --------CCCEEEecCCcceecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                    4457777777665432211  234789999999999998999999999999999999999999987655433


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      ...+.....                   .+.                          ...+..++.++.+|+.+||+.||
T Consensus       210 ~~~~~~~~~-------------------~~~--------------------------~~~~~~~~~~~~~li~~~l~~~P  244 (285)
T cd05632         210 REEVDRRVL-------------------ETE--------------------------EVYSAKFSEEAKSICKMLLTKDP  244 (285)
T ss_pred             HHHHHHhhh-------------------ccc--------------------------cccCccCCHHHHHHHHHHccCCH
Confidence            322211110                   000                          01123456788999999999999


Q ss_pred             CCCCC-----HHHHhcCCCCCCCCC
Q 013973          412 TDRLT-----AREALRHPFFTRDHL  431 (433)
Q Consensus       412 ~~R~t-----a~ell~hp~f~~~~~  431 (433)
                      ++||+     +.+++.|+||.+..+
T Consensus       245 ~~R~~~~~~~~~~l~~~~~~~~~~~  269 (285)
T cd05632         245 KQRLGCQEEGAGEVKRHPFFRNMNF  269 (285)
T ss_pred             hHcCCCcccChHHHHcChhhhcCCH
Confidence            99999     899999999987644

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=1.6e-44  Score=349.43  Aligned_cols=244  Identities=26%  Similarity=0.379  Sum_probs=192.7

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecchh----hHHHHHHHHH-HHHHHHhcCCCCCceEEecceeecCCeEEEEE
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIE-VLQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  177 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~-~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~  177 (433)
                      +.||+|+||.||+|++..+++.||+|++.+...    .......|.. +++.+     .|+||+++++.+.+.+.+|+||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-----~h~~iv~~~~~~~~~~~~~lv~   75 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNL-----KHPFLVGLHYSFQTAEKLYFVL   75 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhC-----CCCCccceeeEEEcCCEEEEEE
Confidence            479999999999999999999999999874321    1222333433 33334     6789999999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCccc
Q 013973          178 EKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  256 (433)
Q Consensus       178 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~  256 (433)
                      ||+ +++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+|||++.                      
T Consensus        76 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~----------------------  131 (321)
T cd05603          76 DYVNGGELFFHLQRER--CFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDS----------------------  131 (321)
T ss_pred             cCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC----------------------
Confidence            999 889998887653  7899999999999999999999999999999999999954                      


Q ss_pred             ccCCCCCCEEEEecCCccccCC---CCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 013973          257 KRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA  333 (433)
Q Consensus       257 ~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~  333 (433)
                           ++.+||+|||++.....   .....+||+.|+|||++.+..++.++|||||||++|||++|..||...+..+...
T Consensus       132 -----~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~  206 (321)
T cd05603         132 -----QGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYD  206 (321)
T ss_pred             -----CCCEEEccCCCCccCCCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHH
Confidence                 44566666666553211   1133579999999999999899999999999999999999999998766544333


Q ss_pred             HHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCC
Q 013973          334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  413 (433)
Q Consensus       334 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  413 (433)
                      .+..                       +...                          .+...+.++.++|.+||+.||.+
T Consensus       207 ~i~~-----------------------~~~~--------------------------~~~~~~~~~~~li~~~l~~~p~~  237 (321)
T cd05603         207 NILH-----------------------KPLQ--------------------------LPGGKTVAACDLLVGLLHKDQRR  237 (321)
T ss_pred             HHhc-----------------------CCCC--------------------------CCCCCCHHHHHHHHHHccCCHhh
Confidence            2211                       1111                          12345668899999999999999


Q ss_pred             CCCH----HHHhcCCCCCCC
Q 013973          414 RLTA----REALRHPFFTRD  429 (433)
Q Consensus       414 R~ta----~ell~hp~f~~~  429 (433)
                      |+++    .|+++|+||...
T Consensus       238 R~~~~~~~~~~~~~~~~~~~  257 (321)
T cd05603         238 RLGAKADFLEIKNHVFFSPI  257 (321)
T ss_pred             cCCCCCCHHHHhCCCCcCCC
Confidence            9975    599999999753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.6e-46  Score=343.63  Aligned_cols=255  Identities=25%  Similarity=0.375  Sum_probs=211.5

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      ..+|.++.+||+|+||+|.+|..+.+.+.||||++++.    +...+..+.|..+|...    ...|.++++...|++-+
T Consensus       348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~----~kppFL~qlHScFQTmD  423 (683)
T KOG0696|consen  348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALP----GKPPFLVQLHSCFQTMD  423 (683)
T ss_pred             ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecC----CCCchHHHHHHHhhhhh
Confidence            45799999999999999999999999999999999753    23344455676666543    34578999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+|+||||+ ||+|--++++-+  ++.+..+..|+.+|+.||-|||++|||+||||.+|||++.+|++||+|||++...-
T Consensus       424 RLyFVMEyvnGGDLMyhiQQ~G--kFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni  501 (683)
T KOG0696|consen  424 RLYFVMEYVNGGDLMYHIQQVG--KFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI  501 (683)
T ss_pred             heeeEEEEecCchhhhHHHHhc--ccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccc
Confidence            999999999 999999998876  89999999999999999999999999999999999999666655444444433221


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                                              .......++||||.|+|||++...+|+.++||||+||+||||+.|++||.+.++.+
T Consensus       502 ------------------------~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~e  557 (683)
T KOG0696|consen  502 ------------------------FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE  557 (683)
T ss_pred             ------------------------cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHH
Confidence                                    11122345799999999999999999999999999999999999999999999888


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      .+..|...--.                                                 ++..+|.++.+++..+|.+.
T Consensus       558 lF~aI~ehnvs-------------------------------------------------yPKslSkEAv~ickg~ltK~  588 (683)
T KOG0696|consen  558 LFQAIMEHNVS-------------------------------------------------YPKSLSKEAVAICKGLLTKH  588 (683)
T ss_pred             HHHHHHHccCc-------------------------------------------------CcccccHHHHHHHHHHhhcC
Confidence            87765443221                                                 23467889999999999999


Q ss_pred             CCCCCCH-----HHHhcCCCCCCC
Q 013973          411 PTDRLTA-----REALRHPFFTRD  429 (433)
Q Consensus       411 P~~R~ta-----~ell~hp~f~~~  429 (433)
                      |.+|+.+     .++-.||||+..
T Consensus       589 P~kRLGcg~~ge~di~~H~FFR~i  612 (683)
T KOG0696|consen  589 PGKRLGCGPEGERDIREHPFFRRI  612 (683)
T ss_pred             CccccCCCCccccchhhCcchhhc
Confidence            9999964     699999999864

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=4.3e-46  Score=354.59  Aligned_cols=256  Identities=26%  Similarity=0.458  Sum_probs=219.8

Q ss_pred             cEEEE--eeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           98 RYKIH--SKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        98 ~~~~~--~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      -|++.  +.||+|-||+||-|.++.+|+.||||++.+.   .+..+....|+.||+.+     +||.||.+...|++.+.
T Consensus       563 vYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l-----~HPGiV~le~M~ET~er  637 (888)
T KOG4236|consen  563 VYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNL-----HHPGIVNLECMFETPER  637 (888)
T ss_pred             HHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhc-----CCCCeeEEEEeecCCce
Confidence            35543  7899999999999999999999999999643   34457788899999999     77899999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          173 ICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       173 ~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      +++|||.+.|++.+.+-.....+|++....+++.||+.||.|||.++|||+||||+|||+.+.                 
T Consensus       638 vFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~-----------------  700 (888)
T KOG4236|consen  638 VFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASA-----------------  700 (888)
T ss_pred             EEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccC-----------------
Confidence            999999999999998877777899999999999999999999999999999999999999643                 


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                             +.-.++||||||+|++.+...  ..++||+.|+|||++..+.|+..-|+||.||++|.-++|..||..+++..
T Consensus       701 -------~~FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIn  773 (888)
T KOG4236|consen  701 -------SPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDIN  773 (888)
T ss_pred             -------CCCCceeeccccceeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchh
Confidence                   345689999999999887654  55799999999999999999999999999999999999999998655432


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      -.                         |....+-+|...                      |..+++++.|||.++|+..
T Consensus       774 dQ-------------------------IQNAaFMyPp~P----------------------W~eis~~AidlIn~LLqVk  806 (888)
T KOG4236|consen  774 DQ-------------------------IQNAAFMYPPNP----------------------WSEISPEAIDLINNLLQVK  806 (888)
T ss_pred             HH-------------------------hhccccccCCCc----------------------hhhcCHHHHHHHHHHHHHH
Confidence            21                         222233333322                      3467889999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCC
Q 013973          411 PTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       411 P~~R~ta~ell~hp~f~~~  429 (433)
                      =.+|.+.+..|.|||+++-
T Consensus       807 m~kRysvdk~lsh~Wlq~y  825 (888)
T KOG4236|consen  807 MRKRYSVDKSLSHPWLQDY  825 (888)
T ss_pred             HHHhcchHhhccchhhhcc
Confidence            9999999999999999875

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=2.5e-44  Score=349.49  Aligned_cols=256  Identities=25%  Similarity=0.393  Sum_probs=201.2

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++.+.||+|+||.||+++++.+++.||+|++....    .....+..|..++..+     .|++|+.+++.+...+.
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~l~~~~~~~~~   75 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNG-----DCQWITTLHYAFQDENY   75 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEEcCCE
Confidence            46999999999999999999999999999999986422    1223345566666655     67889999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      .|+||||+ ||+|.+++.... ..+++..+..++.|++.||+|||++||+||||||+|||++                  
T Consensus        76 ~~lv~Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~------------------  136 (331)
T cd05624          76 LYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLD------------------  136 (331)
T ss_pred             EEEEEeCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEc------------------
Confidence            99999999 999999998643 3689999999999999999999999999999999999994                  


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhC-----CCCCCcchhHHHHHHHHHHHhCCCC
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILG-----LGWTYPCDIWSVGCILVELCTGEAL  322 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~elltg~~P  322 (433)
                               .++.+||+|||++.......    ...+||+.|+|||++.+     ..++.++|||||||++|+|++|+.|
T Consensus       137 ---------~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~P  207 (331)
T cd05624         137 ---------MNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP  207 (331)
T ss_pred             ---------CCCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCC
Confidence                     44567777777765433222    22479999999999976     4688999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       323 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      |...+..+.+..+....                     ..+.+|.                       .....+.++++|
T Consensus       208 f~~~~~~~~~~~i~~~~---------------------~~~~~p~-----------------------~~~~~~~~~~~l  243 (331)
T cd05624         208 FYAESLVETYGKIMNHE---------------------ERFQFPS-----------------------HITDVSEEAKDL  243 (331)
T ss_pred             ccCCCHHHHHHHHHcCC---------------------CcccCCC-----------------------ccccCCHHHHHH
Confidence            98766554443322110                     0011111                       112457789999


Q ss_pred             HHhccccCCCC--CCCHHHHhcCCCCCCC
Q 013973          403 LQGLLRYDPTD--RLTAREALRHPFFTRD  429 (433)
Q Consensus       403 i~~~L~~dP~~--R~ta~ell~hp~f~~~  429 (433)
                      |.+||+.++.+  |++++++++||||+..
T Consensus       244 i~~ll~~~~~~~~~~~~~~~~~h~~f~~~  272 (331)
T cd05624         244 IQRLICSRERRLGQNGIEDFKKHAFFEGI  272 (331)
T ss_pred             HHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence            99999976654  5689999999999764

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=4.6e-44  Score=359.36  Aligned_cols=277  Identities=27%  Similarity=0.357  Sum_probs=199.6

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      ...|.+.+.||+|+||.||+|.+..+++.||||....     .....|+.+++++     .|+||+++++++...+..++
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-----~~~~~E~~iL~~L-----~HpnIv~l~~~~~~~~~~~l  237 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-----ASSVHEARLLRRL-----SHPAVLALLDVRVVGGLTCL  237 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-----cCHHHHHHHHHHC-----CCCCCCcEEEEEEECCEEEE
Confidence            3579999999999999999999999999999996432     2346799999988     67899999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          176 VFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       176 V~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      |||++.++|.+++.... ..+++..++.++.||+.||.|||++|||||||||+|||++.++                   
T Consensus       238 v~e~~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~-------------------  297 (461)
T PHA03211        238 VLPKYRSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPE-------------------  297 (461)
T ss_pred             EEEccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCC-------------------
Confidence            99999889999987643 3699999999999999999999999999999999999995544                   


Q ss_pred             cccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC---
Q 013973          256 FKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE---  327 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~---  327 (433)
                              .+||+|||+++.....     ....+||..|+|||++.+..++.++|||||||++|||++|..|+-...   
T Consensus       298 --------~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~  369 (461)
T PHA03211        298 --------DICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGD  369 (461)
T ss_pred             --------CEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCccc
Confidence                    4566666655432211     123469999999999999999999999999999999999876543211   


Q ss_pred             ----hHHHHHHHHHHhCCC----CHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHH
Q 013973          328 ----NLEHLAMMERVLGPL----PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL  399 (433)
Q Consensus       328 ----~~~~~~~i~~~~~~~----p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (433)
                          ....+..+....+..    +...............  .....+.                ............+.++
T Consensus       370 ~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~----------------~~~~~~~~~~~~~~~~  431 (461)
T PHA03211        370 ERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRA--ARNRRPA----------------YTRPAWTRYYKLDLDV  431 (461)
T ss_pred             ccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhh--hcccCCc----------------cCCcchhhhccccchH
Confidence                112222222222111    1000000000000000  0000000                0000000112345689


Q ss_pred             HHHHHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          400 THLLQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       400 ~~li~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      .+||.+||+.||.+|||+.|+|+||||+.
T Consensus       432 ~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        432 EYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             HHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence            99999999999999999999999999975

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=5e-44  Score=334.48  Aligned_cols=252  Identities=36%  Similarity=0.591  Sum_probs=202.3

Q ss_pred             EEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHH---HHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           99 YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA---AMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~---~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      |++++.||+|+||+||+|.+..+++.||+|++.........   ...|+.+++.+     .|++|+++++++......++
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l-----~~~~i~~~~~~~~~~~~~~~   75 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRL-----RHPNIVQILDVFQDDNYLYI   75 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHH-----TBTTBCHEEEEEEESSEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccc-----cccccccccccccccccccc
Confidence            78999999999999999999999999999999865433332   24488888888     56889999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      |||++ +++|.+++....  .+++..+..++.||+.||+|||+.||+|+||||+||+++                     
T Consensus        76 v~~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~---------------------  132 (260)
T PF00069_consen   76 VMEYCPGGSLQDYLQKNK--PLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLD---------------------  132 (260)
T ss_dssp             EEEEETTEBHHHHHHHHS--SBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEES---------------------
T ss_pred             cccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccc---------------------
Confidence            99999 669999998443  799999999999999999999999999999999999994                     


Q ss_pred             ccccCCCCCCEEEEecCCcccc---CCCCCceeecCcccchhhhh-CCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYE---RPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                            .++.++|+|||.+...   ........+|..|+|||++. +..++.++|+||||+++|+|++|..||......+
T Consensus       133 ------~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~  206 (260)
T PF00069_consen  133 ------ENGEVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDD  206 (260)
T ss_dssp             ------TTSEEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHH
T ss_pred             ------cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchh
Confidence                  4556677777776532   11223357899999999998 7889999999999999999999999999774444


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+.+........                                          ..........++.++|.+||+.|
T Consensus       207 ~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~~~l~~li~~~l~~~  244 (260)
T PF00069_consen  207 QLEIIEKILKRPLPS------------------------------------------SSQQSREKSEELRDLIKKMLSKD  244 (260)
T ss_dssp             HHHHHHHHHHTHHHH------------------------------------------HTTSHTTSHHHHHHHHHHHSSSS
T ss_pred             hhhhhhhcccccccc------------------------------------------cccccchhHHHHHHHHHHHccCC
Confidence            443333222110000                                          00001122368999999999999


Q ss_pred             CCCCCCHHHHhcCCCC
Q 013973          411 PTDRLTAREALRHPFF  426 (433)
Q Consensus       411 P~~R~ta~ell~hp~f  426 (433)
                      |++||++.++++||||
T Consensus       245 p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  245 PEQRPSAEELLKHPWF  260 (260)
T ss_dssp             GGGSTTHHHHHTSGGG
T ss_pred             hhHCcCHHHHhcCCCC
Confidence            9999999999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=6e-44  Score=363.48  Aligned_cols=253  Identities=24%  Similarity=0.299  Sum_probs=201.6

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC-
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN-  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~-  171 (433)
                      .++|.+.+.||+|+||+||+|.+..+++.||||++...   .........|+.++..+     .|++++++...+.... 
T Consensus        31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~-----~h~~iv~~~~~~~~~~~  105 (496)
T PTZ00283         31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNC-----DFFSIVKCHEDFAKKDP  105 (496)
T ss_pred             CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcC-----CCCcEEEeecceecccc
Confidence            46899999999999999999999999999999998642   23334556677777665     6688998877664322 


Q ss_pred             -------eEEEEEecC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccC
Q 013973          172 -------HICIVFEKL-GSSLYDFLRKNN--YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVP  241 (433)
Q Consensus       172 -------~~~lV~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~  241 (433)
                             .+++||||+ +|+|.++|....  ...+++..+..++.|++.||.|||++|||||||||+|||++.       
T Consensus       106 ~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~-------  178 (496)
T PTZ00283        106 RNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCS-------  178 (496)
T ss_pred             cCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeC-------
Confidence                   478999999 899999987532  346899999999999999999999999999999999999954       


Q ss_pred             CCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHH
Q 013973          242 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL  316 (433)
Q Consensus       242 dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el  316 (433)
                                          ++.+||+|||+++.....     ....+||+.|+|||++.+..++.++|||||||++|||
T Consensus       179 --------------------~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeL  238 (496)
T PTZ00283        179 --------------------NGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYEL  238 (496)
T ss_pred             --------------------CCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence                                455777777766543221     2345799999999999999999999999999999999


Q ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCch
Q 013973          317 CTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA  396 (433)
Q Consensus       317 ltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (433)
                      ++|..||.+.+..+.+..+..                       +..                         ...+..++
T Consensus       239 ltG~~Pf~~~~~~~~~~~~~~-----------------------~~~-------------------------~~~~~~~~  270 (496)
T PTZ00283        239 LTLKRPFDGENMEEVMHKTLA-----------------------GRY-------------------------DPLPPSIS  270 (496)
T ss_pred             HHCCCCCCCCCHHHHHHHHhc-----------------------CCC-------------------------CCCCCCCC
Confidence            999999987665443332211                       000                         01123567


Q ss_pred             hHHHHHHHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          397 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       397 ~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      +++.+||.+||+.||.+||++.++++|||++.
T Consensus       271 ~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~  302 (496)
T PTZ00283        271 PEMQEIVTALLSSDPKRRPSSSKLLNMPICKL  302 (496)
T ss_pred             HHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence            78999999999999999999999999999763

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=7.7e-44  Score=362.13  Aligned_cols=251  Identities=22%  Similarity=0.253  Sum_probs=204.1

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCC-CeEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~-~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ..|.+.+.||+|+||.||+|....+ ++.||+|.+... ......+..|+.+++.+     +|+||+++++.+...+++|
T Consensus        67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l-----~Hpniv~~~~~~~~~~~~~  141 (478)
T PTZ00267         67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAAC-----DHFGIVKHFDDFKSDDKLL  141 (478)
T ss_pred             eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhC-----CCCCEeEEEEEEEECCEEE
Confidence            3499999999999999999998877 788999976532 23334566788888887     7799999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      |||||+ ||+|.++|...  ....+++.++..++.||+.||+|||++|||||||||+|||++.                 
T Consensus       142 lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~-----------------  204 (478)
T PTZ00267        142 LIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMP-----------------  204 (478)
T ss_pred             EEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECC-----------------
Confidence            999999 99999988642  2246899999999999999999999999999999999999954                 


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                                ++.+||+|||++......     ....+||+.|+|||++.+..++.++|||||||++|||++|..||.+.
T Consensus       205 ----------~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~  274 (478)
T PTZ00267        205 ----------TGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGP  274 (478)
T ss_pred             ----------CCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence                      456777777776543322     23357999999999999999999999999999999999999999876


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      +..+.+..+...  .                     .                         ...+..++.++.+||.+|
T Consensus       275 ~~~~~~~~~~~~--~---------------------~-------------------------~~~~~~~s~~~~~li~~~  306 (478)
T PTZ00267        275 SQREIMQQVLYG--K---------------------Y-------------------------DPFPCPVSSGMKALLDPL  306 (478)
T ss_pred             CHHHHHHHHHhC--C---------------------C-------------------------CCCCccCCHHHHHHHHHH
Confidence            655443332110  0                     0                         001224567899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFT  427 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~  427 (433)
                      |+.||++||++.+++.|+|++
T Consensus       307 L~~dP~~Rps~~~~l~~~~~~  327 (478)
T PTZ00267        307 LSKNPALRPTTQQLLHTEFLK  327 (478)
T ss_pred             hccChhhCcCHHHHHhCHHHH
Confidence            999999999999999999985

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=2.2e-44  Score=349.27  Aligned_cols=298  Identities=18%  Similarity=0.250  Sum_probs=205.1

Q ss_pred             EEeeeecc--ccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973          101 IHSKMGEG--TFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus       101 ~~~~iG~G--~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      ++++||+|  +|++||++.++.+|+.||+|.++..   .........|+.+++.+     +|+||+++++++..++..|+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-----~hpniv~~~~~~~~~~~~~l   76 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLF-----NHPNIVPYRATFIADNELWV   76 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhc-----CCCCeeeEEEEEEECCEEEE
Confidence            56889999  7899999999999999999998743   22334566788888877     67899999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      ||||+ +++|.+++.......+++..++.++.|++.||+|||++|||||||||+|||++.++.++++||+....      
T Consensus        77 v~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~------  150 (327)
T cd08227          77 VTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLS------  150 (327)
T ss_pred             EEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhc------
Confidence            99999 89999999765445699999999999999999999999999999999999998877777777753321      


Q ss_pred             ccccCCCCCCEEEEecCCccc-cCCCCCceeecCcccchhhhhC--CCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTY-ERPDQNYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~-~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                                  +.++|.... .........++..|+|||++.+  ..++.++|||||||++|||++|..||........
T Consensus       151 ------------~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  218 (327)
T cd08227         151 ------------MINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM  218 (327)
T ss_pred             ------------cccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH
Confidence                        112221110 0111122357788999999986  4689999999999999999999999986554433


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhcc----C-cccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRR----G-RLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      ....  ..+..+... .......+.+...    + ...........     .................+++++.+||.+|
T Consensus       219 ~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~~  290 (327)
T cd08227         219 LLEK--LNGTVPCLL-DTTTIPAEELTMKPSRSGANSGLGESTTVS-----TPRPSNGESSSHPYNRTFSPHFHHFVEQC  290 (327)
T ss_pred             HHHH--hcCCccccc-cccchhhhhcccCCcccCCcCCCCcccccC-----CcCccccCCcccccccccCHHHHHHHHHH
Confidence            2221  112222110 0000000000000    0 00000000000     00000000001112234577899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      |+.||++|||++|+++||||++.
T Consensus       291 l~~dP~~Rpt~~ell~~p~f~~~  313 (327)
T cd08227         291 LQRNPDARPSASTLLNHSFFKQI  313 (327)
T ss_pred             HhhCchhcCCHHHHhcChhhhhc
Confidence            99999999999999999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=5e-44  Score=338.66  Aligned_cols=250  Identities=23%  Similarity=0.414  Sum_probs=195.7

Q ss_pred             eeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecC
Q 013973          105 MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  180 (433)
Q Consensus       105 iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~  180 (433)
                      ||+|+||.||++.++.+|+.||+|.+....    ........|+++++.+     +|++|+++.+.++...++|+||||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l-----~hp~i~~~~~~~~~~~~~~lv~e~~   75 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKV-----NSPFIVNLAYAFESKTHLCLVMSLM   75 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhc-----CCCcEEEEEEEEecCCeEEEEEecC
Confidence            799999999999999999999999986321    1223345688888887     6789999999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccC
Q 013973          181 -GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM  259 (433)
Q Consensus       181 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~  259 (433)
                       |++|.+++.......+++..+..++.||+.||+|||+.||+||||||+|||+++                         
T Consensus        76 ~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~-------------------------  130 (277)
T cd05607          76 NGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDD-------------------------  130 (277)
T ss_pred             CCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcC-------------------------
Confidence             899999887665557899999999999999999999999999999999999954                         


Q ss_pred             CCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 013973          260 PKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER  337 (433)
Q Consensus       260 ~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~i~~  337 (433)
                        ++.++|+|||++.......  ....||..|+|||++.+..++.++|+|||||++|||++|..||...........+..
T Consensus       131 --~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~  208 (277)
T cd05607         131 --QGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKR  208 (277)
T ss_pred             --CCCEEEeeceeeeecCCCceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHH
Confidence              4456777777665433221  224689999999999998899999999999999999999999975432111111000


Q ss_pred             HhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCH
Q 013973          338 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  417 (433)
Q Consensus       338 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta  417 (433)
                      .                   ........                         ....++.++++||.+||+.||++||++
T Consensus       209 ~-------------------~~~~~~~~-------------------------~~~~~~~~~~~li~~~L~~~P~~R~~~  244 (277)
T cd05607         209 R-------------------TLEDEVKF-------------------------EHQNFTEESKDICRLFLAKKPEDRLGS  244 (277)
T ss_pred             H-------------------hhcccccc-------------------------ccccCCHHHHHHHHHHhccCHhhCCCC
Confidence            0                   00000000                         012457789999999999999999999


Q ss_pred             ----HHHhcCCCCCCCC
Q 013973          418 ----REALRHPFFTRDH  430 (433)
Q Consensus       418 ----~ell~hp~f~~~~  430 (433)
                          ++++.||||+.-.
T Consensus       245 ~~~~~~~~~h~~f~~~~  261 (277)
T cd05607         245 REKNDDPRKHEFFKTIN  261 (277)
T ss_pred             ccchhhhhcChhhcCCC
Confidence                7788999997643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=1.6e-43  Score=335.90  Aligned_cols=277  Identities=32%  Similarity=0.527  Sum_probs=216.9

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      +|++++.||.|++|.||+|+++.+++.||||.++...   .....+..|+++++++     .|+|++++++++...+..+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~   75 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHPNIVKLLDVIHTENKLY   75 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhc-----CCCCCcchhhhcccCCcEE
Confidence            4899999999999999999999999999999886322   1234567899999988     6789999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          175 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       175 lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      +||||+.++|.+++.......+++..+..++.|++.||+|||+.||+|+||||+||+++++                   
T Consensus        76 ~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~-------------------  136 (284)
T cd07860          76 LVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE-------------------  136 (284)
T ss_pred             EEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC-------------------
Confidence            9999997799999887655679999999999999999999999999999999999999544                   


Q ss_pred             ccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCC-CCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                              +.+||+|||.+.......   ....++..|+|||++.+.. ++.++|+|||||++|+|+||..||...+..+
T Consensus       137 --------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~  208 (284)
T cd07860         137 --------GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID  208 (284)
T ss_pred             --------CCEEEeeccchhhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH
Confidence                    456666666654332211   2235688999999887654 6889999999999999999999999888877


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+...++..+...+............-.  .+.     .             .........++.++.++|.+||+.|
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-----~-------------~~~~~~~~~~~~~~~~li~~~l~~~  268 (284)
T cd07860         209 QLFRIFRTLGTPDEVVWPGVTSLPDYKPSFP--KWA-----R-------------QDFSKVVPPLDEDGRDLLSQMLHYD  268 (284)
T ss_pred             HHHHHHHHhCCCChhhhhhhhHHHHHHhhcc--ccc-----c-------------cCHHHHcccCCHHHHHHHHHhcCCC
Confidence            7777777777776655443322211111000  000     0             0001112356778999999999999


Q ss_pred             CCCCCCHHHHhcCCCC
Q 013973          411 PTDRLTAREALRHPFF  426 (433)
Q Consensus       411 P~~R~ta~ell~hp~f  426 (433)
                      |++|||++|++.||||
T Consensus       269 P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         269 PNKRISAKAALAHPFF  284 (284)
T ss_pred             cccCCCHHHHhcCCCC
Confidence            9999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=9.5e-45  Score=349.57  Aligned_cols=242  Identities=26%  Similarity=0.380  Sum_probs=203.2

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  177 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~  177 (433)
                      .+++++.||+|-||.||+|....+. .||+|.++......+.+..|+++|++|     .|++||++++++..++.+||||
T Consensus       207 ~l~l~~~LG~G~FG~V~~g~~~~~~-~vavk~ik~~~m~~~~f~~Ea~iMk~L-----~H~~lV~l~gV~~~~~piyIVt  280 (468)
T KOG0197|consen  207 ELKLIRELGSGQFGEVWLGKWNGST-KVAVKTIKEGSMSPEAFLREAQIMKKL-----RHEKLVKLYGVCTKQEPIYIVT  280 (468)
T ss_pred             HHHHHHHhcCCccceEEEEEEcCCC-cccceEEeccccChhHHHHHHHHHHhC-----cccCeEEEEEEEecCCceEEEE
Confidence            4567789999999999999987553 499999986555667788999999999     6688999999999988999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCccc
Q 013973          178 EKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  256 (433)
Q Consensus       178 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~  256 (433)
                      ||| .|+|.+||+..++..+...+.+.++.|||.|++||+++++|||||-..|||++                       
T Consensus       281 E~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~-----------------------  337 (468)
T KOG0197|consen  281 EYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVD-----------------------  337 (468)
T ss_pred             EecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeec-----------------------
Confidence            999 99999999986667899999999999999999999999999999999999995                       


Q ss_pred             ccCCCCCCEEEEecCCccccCCCCCce----eecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChHHH
Q 013973          257 KRMPKSSAIKVIDFGSTTYERPDQNYI----VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH  331 (433)
Q Consensus       257 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~----~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~~  331 (433)
                          ++..+||+|||+|+...++....    .-..-|.|||.+....++.+||||||||+||||+| |+.||.+.+..+.
T Consensus       338 ----~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev  413 (468)
T KOG0197|consen  338 ----EDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEV  413 (468)
T ss_pred             ----cCceEEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHH
Confidence                45566666666666333322111    12567999999999999999999999999999999 9999999888777


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccC-cccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRG-RLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      +..+.                       +| ++.                          .|+.+|+++.+++..||..+
T Consensus       414 ~~~le-----------------------~GyRlp--------------------------~P~~CP~~vY~lM~~CW~~~  444 (468)
T KOG0197|consen  414 LELLE-----------------------RGYRLP--------------------------RPEGCPDEVYELMKSCWHED  444 (468)
T ss_pred             HHHHh-----------------------ccCcCC--------------------------CCCCCCHHHHHHHHHHhhCC
Confidence            66543                       22 222                          34578899999999999999


Q ss_pred             CCCCCCHHHHh
Q 013973          411 PTDRLTAREAL  421 (433)
Q Consensus       411 P~~R~ta~ell  421 (433)
                      |++|||.+.+.
T Consensus       445 P~~RPtF~~L~  455 (468)
T KOG0197|consen  445 PEDRPTFETLR  455 (468)
T ss_pred             cccCCCHHHHH
Confidence            99999987553

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-47  Score=340.89  Aligned_cols=253  Identities=26%  Similarity=0.449  Sum_probs=210.0

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  177 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~  177 (433)
                      -|.++++||+|+||.||+|.++.+|+.+|||.+. .+....+...|+.+++++     ..+++|+.|+.|-....++|||
T Consensus        34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VP-V~sDLQEIIKEISIMQQC-----~S~yVVKYYGSYFK~sDLWIVM  107 (502)
T KOG0574|consen   34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVP-VDTDLQEIIKEISIMQQC-----KSKYVVKYYGSYFKHSDLWIVM  107 (502)
T ss_pred             HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecC-ccchHHHHHHHHHHHHHc-----CCchhhhhhhhhccCCceEeeh
Confidence            3889999999999999999999999999999986 345567788899999999     6688999999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCccc
Q 013973          178 EKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  256 (433)
Q Consensus       178 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~  256 (433)
                      ||| .|++.|.++.++ ++|++.++..++...+.||+|||...-||||||..|||++-+|+.|                 
T Consensus       108 EYCGAGSiSDI~R~R~-K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AK-----------------  169 (502)
T KOG0574|consen  108 EYCGAGSISDIMRARR-KPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAK-----------------  169 (502)
T ss_pred             hhcCCCcHHHHHHHhc-CCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhh-----------------
Confidence            999 789999988764 6899999999999999999999999999999999999996665554                 


Q ss_pred             ccCCCCCCEEEEecCCccccCC---CCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 013973          257 KRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA  333 (433)
Q Consensus       257 ~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~  333 (433)
                                |+|||.|....+   ..+++.||+.|||||++..-.|+.++||||||++..||..|++||.+-..+...-
T Consensus       170 ----------LADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF  239 (502)
T KOG0574|consen  170 ----------LADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF  239 (502)
T ss_pred             ----------hhhccccchhhhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeE
Confidence                      555555543332   2356789999999999999999999999999999999999999998755543322


Q ss_pred             HHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCC
Q 013973          334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  413 (433)
Q Consensus       334 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  413 (433)
                      +|-.  .++|.                         .                   ..+...+.++.|||++||.++|++
T Consensus       240 MIPT--~PPPT-------------------------F-------------------~KPE~WS~~F~DFi~~CLiK~PE~  273 (502)
T KOG0574|consen  240 MIPT--KPPPT-------------------------F-------------------KKPEEWSSEFNDFIRSCLIKKPEE  273 (502)
T ss_pred             eccC--CCCCC-------------------------C-------------------CChHhhhhHHHHHHHHHhcCCHHH
Confidence            2100  01110                         0                   012345778999999999999999


Q ss_pred             CCCHHHHhcCCCCCCCC
Q 013973          414 RLTAREALRHPFFTRDH  430 (433)
Q Consensus       414 R~ta~ell~hp~f~~~~  430 (433)
                      |-||.++++|||.++.+
T Consensus       274 R~TA~~L~~H~FiknA~  290 (502)
T KOG0574|consen  274 RKTALRLCEHTFIKNAP  290 (502)
T ss_pred             HHHHHHHhhhhhhcCCC
Confidence            99999999999998764

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=5.4e-44  Score=364.70  Aligned_cols=293  Identities=22%  Similarity=0.311  Sum_probs=203.1

Q ss_pred             ecCceecCcEEEEeeeeccccEEEEEEEECCCCe-EEEEE------------------EeecchhhHHHHHHHHHHHHHH
Q 013973           90 ALGENLTSRYKIHSKMGEGTFGQVLECWDRERKE-MVAIK------------------IVRGIKKYREAAMIEIEVLQQL  150 (433)
Q Consensus        90 ~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~-~vAiK------------------~~~~~~~~~~~~~~E~~~l~~l  150 (433)
                      ..+..+.++|++++.||+|+||+||+|..+.... .+++|                  .++........+..|+.+++.+
T Consensus       141 ~~~~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l  220 (501)
T PHA03210        141 KHDDEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRL  220 (501)
T ss_pred             ccchhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhC
Confidence            3344566789999999999999999987653322 12222                  1122223344567899999888


Q ss_pred             HhcCCCCCceEEecceeecCCeEEEEEecCCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCC
Q 013973          151 AKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNN---YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKP  227 (433)
Q Consensus       151 ~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp  227 (433)
                           +|+||+++++++...+..|+|+++++++|.+++....   ........++.++.||+.||+|||++|||||||||
T Consensus       221 -----~HpnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP  295 (501)
T PHA03210        221 -----NHENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKL  295 (501)
T ss_pred             -----CCCCcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence                 6789999999999999999999999889998876432   12234667889999999999999999999999999


Q ss_pred             CceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCc
Q 013973          228 ENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYP  303 (433)
Q Consensus       228 ~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~  303 (433)
                      +|||++.                           ++.+||+|||++.......    ...+||..|+|||++.+..++.+
T Consensus       296 ~NILl~~---------------------------~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  348 (501)
T PHA03210        296 ENIFLNC---------------------------DGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEI  348 (501)
T ss_pred             HHEEECC---------------------------CCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcH
Confidence            9999944                           4567777777776443322    23479999999999999999999


Q ss_pred             chhHHHHHHHHHHHhCCCC-CCCC--ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhcc
Q 013973          304 CDIWSVGCILVELCTGEAL-FQTH--ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK  380 (433)
Q Consensus       304 ~DvwSlGv~l~elltg~~P-f~~~--~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  380 (433)
                      +|||||||++|||++|..+ |...  .....+..+...++....++.. .......++....+....             
T Consensus       349 ~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~i~~~~~~~~~-------------  414 (501)
T PHA03210        349 TDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPD-PPCKLFDYIDSAEIDHAG-------------  414 (501)
T ss_pred             HHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCC-cHHHHHHHhhhhhcccCc-------------
Confidence            9999999999999998754 4322  2334444444444332222111 011111122111110000             


Q ss_pred             chhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCCCCC
Q 013973          381 LPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL  431 (433)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~~~  431 (433)
                       ..+.....  ...++.++.++|.+||++||.+|||+.|+|.||||.....
T Consensus       415 -~~~~~~~~--~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~~  462 (501)
T PHA03210        415 -HSVPPLIR--NLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEEE  462 (501)
T ss_pred             -cchhhHHH--hcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCCc
Confidence             00001110  1135667899999999999999999999999999987543

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=3.7e-43  Score=334.80  Aligned_cols=278  Identities=28%  Similarity=0.464  Sum_probs=212.1

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh--hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ++|++.+.||+|++|.||+|.++.+++.||+|.+.....  .......|+.+++.+     .|++|+++++++.+....|
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~   79 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDL-----KHANIVTLHDIIHTKKTLT   79 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhC-----CCcceeeEEEEEecCCeEE
Confidence            569999999999999999999999999999999864321  223456799999988     6789999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          175 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       175 lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      +||||++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||+++++.                 
T Consensus        80 lv~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~-----------------  141 (291)
T cd07844          80 LVFEYLDTDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGE-----------------  141 (291)
T ss_pred             EEEecCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCC-----------------
Confidence            999999779999987654 36899999999999999999999999999999999999965554                 


Q ss_pred             ccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCC-hH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE-NL  329 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~~~~-~~  329 (433)
                                +||+|||.+......   .....++..|+|||++.+ ..++.++|||||||++|+|++|..||.+.. ..
T Consensus       142 ----------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~  211 (291)
T cd07844         142 ----------LKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVE  211 (291)
T ss_pred             ----------EEECccccccccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHH
Confidence                      555555554322111   112246888999999876 458899999999999999999999997765 55


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCch--hHHHHHHHhcc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA--GDLTHLLQGLL  407 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~li~~~L  407 (433)
                      +.+..+...++.+....+..+..............      ....+             .......+  .++.++|.+||
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-------------~~~~~~~~~~~~~~~li~~~L  272 (291)
T cd07844         212 DQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFY------PPRPL-------------INHAPRLDRIPHGEELALKFL  272 (291)
T ss_pred             HHHHHHHHhcCCCChhhhhhhhhcccccccccccc------CChhH-------------HHhCcCCCCchhHHHHHHHHh
Confidence            66677777777766665554432221111110000      00000             01111223  67899999999


Q ss_pred             ccCCCCCCCHHHHhcCCCC
Q 013973          408 RYDPTDRLTAREALRHPFF  426 (433)
Q Consensus       408 ~~dP~~R~ta~ell~hp~f  426 (433)
                      +.||++|||+.|+++||||
T Consensus       273 ~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         273 QYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             ccCcccccCHHHHhcCCCC
Confidence            9999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=2.5e-43  Score=336.02  Aligned_cols=250  Identities=28%  Similarity=0.474  Sum_probs=209.4

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++....    ...+.+..|+++++++     .|+||+++++.+...+.
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~   75 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSI-----RHPFLVNLYGSFQDDSN   75 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-----CCCCccceeeEEEcCCe
Confidence            36999999999999999999999999999999986432    2345567788888888     57899999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +|+||||+ +++|.+++....  .+++..+..++.||+.||.|||+.||+|+||||+|||++                  
T Consensus        76 ~~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~------------------  135 (290)
T cd05580          76 LYLVMEYVPGGELFSHLRKSG--RFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLD------------------  135 (290)
T ss_pred             EEEEEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC------------------
Confidence            99999999 999999998764  799999999999999999999999999999999999994                  


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                               .++.+||+|||++...........|++.|+|||.+.+..++.++|+||||+++|+|++|..||...+..+.
T Consensus       136 ---------~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~  206 (290)
T cd05580         136 ---------SDGYIKITDFGFAKRVKGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQI  206 (290)
T ss_pred             ---------CCCCEEEeeCCCccccCCCCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                     44567888888776655444556789999999999888889999999999999999999999987664333


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      ...+..                       +...                          .+...+..++++|.+||+.||
T Consensus       207 ~~~~~~-----------------------~~~~--------------------------~~~~~~~~l~~li~~~l~~~p  237 (290)
T cd05580         207 YEKILE-----------------------GKVR--------------------------FPSFFSPDAKDLIRNLLQVDL  237 (290)
T ss_pred             HHHHhc-----------------------CCcc--------------------------CCccCCHHHHHHHHHHccCCH
Confidence            322211                       1111                          122446789999999999999


Q ss_pred             CCCC-----CHHHHhcCCCCCCC
Q 013973          412 TDRL-----TAREALRHPFFTRD  429 (433)
Q Consensus       412 ~~R~-----ta~ell~hp~f~~~  429 (433)
                      .+|+     +++|+++||||...
T Consensus       238 ~~R~~~~~~~~~~l~~~~~~~~~  260 (290)
T cd05580         238 TKRLGNLKNGVNDIKNHPWFAGI  260 (290)
T ss_pred             HHccCcccCCHHHHHcCcccccC
Confidence            9999     89999999999764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.7e-46  Score=358.44  Aligned_cols=255  Identities=25%  Similarity=0.459  Sum_probs=212.5

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEee-cchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~-~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      +-|.|+..||.|+||+||+|.++.++-..|-|++. +.....+.++-|++||..+     .||+|+++++.|-..+.++|
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~C-----dHP~ivkLl~ayy~enkLwi  106 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAEC-----DHPVIVKLLSAYYFENKLWI  106 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcC-----CChHHHHHHHHHhccCceEE
Confidence            45889999999999999999999999989999886 3455667788899999988     78999999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      +.||| ||-....+..-+ +.|++.++..+.+|++.||.|||+++|||||||..|||++-+|.                 
T Consensus       107 liEFC~GGAVDaimlEL~-r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGd-----------------  168 (1187)
T KOG0579|consen  107 LIEFCGGGAVDAIMLELG-RVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGD-----------------  168 (1187)
T ss_pred             EEeecCCchHhHHHHHhc-cccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCc-----------------
Confidence            99999 666666655544 68999999999999999999999999999999999999976654                 


Q ss_pred             ccccCCCCCCEEEEecCCccccCC---CCCceeecCcccchhhhhC-----CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILG-----LGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                                ++|+|||.+.....   ....+.|||+|||||++..     .+|+.++||||||++|.||..+.+|.+..
T Consensus       169 ----------irLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhel  238 (1187)
T KOG0579|consen  169 ----------IRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHEL  238 (1187)
T ss_pred             ----------EeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCcccc
Confidence                      55555554432221   2345789999999999864     57999999999999999999999999998


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      +.+..+..|.+.-.|+-                                              -.+..++..+.||+..|
T Consensus       239 npMRVllKiaKSePPTL----------------------------------------------lqPS~Ws~~F~DfLk~c  272 (1187)
T KOG0579|consen  239 NPMRVLLKIAKSEPPTL----------------------------------------------LQPSHWSRSFSDFLKRC  272 (1187)
T ss_pred             chHHHHHHHhhcCCCcc----------------------------------------------cCcchhhhHHHHHHHHH
Confidence            88887766655332211                                              11345677899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      |.+||..||+++|+|+||||++..
T Consensus       273 L~Knp~~Rp~aaqll~Hpfv~~~~  296 (1187)
T KOG0579|consen  273 LVKNPRNRPPAAQLLKHPFVQNAP  296 (1187)
T ss_pred             HhcCCccCCCHHHHhhCcccccCC
Confidence            999999999999999999998643

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=3e-43  Score=336.55  Aligned_cols=279  Identities=29%  Similarity=0.469  Sum_probs=214.0

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh------hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK------YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      +|++.+.||+|+||.||+|.+..+++.||+|.++....      ....+..|+++++.+     .|++++++++++.+.+
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~~~~~~~~~~~   75 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQEL-----KHPNIIGLLDVFGHKS   75 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhc-----CCCCChhhhheeecCC
Confidence            48899999999999999999999999999999874322      234456788888887     5788999999999999


Q ss_pred             eEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          172 HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       172 ~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      ..++||||++++|.+++.... ..+++..+..++.||+.||.|||++||+|+||||+|||++.++               
T Consensus        76 ~~~lv~e~~~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~---------------  139 (298)
T cd07841          76 NINLVFEFMETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDG---------------  139 (298)
T ss_pred             EEEEEEcccCCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCC---------------
Confidence            999999999889999997654 4699999999999999999999999999999999999996554               


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                                  .++|+|||++.......   ....++..|+|||.+.+ ..++.++|+|||||++|||++|.+||.+.+
T Consensus       140 ------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~  207 (298)
T cd07841         140 ------------VLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDS  207 (298)
T ss_pred             ------------CEEEccceeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCc
Confidence                        45555555554332211   12356788999999865 457899999999999999999999998887


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ..+.+..+...++......+.................                     ..........+.++.+||.+||
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~li~~~l  266 (298)
T cd07841         208 DIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPP---------------------TPLKQIFPAASDDALDLLQRLL  266 (298)
T ss_pred             cHHHHHHHHHHcCCCchhhhhhcccccccccccccCC---------------------cchhhhcccccHHHHHHHHHHh
Confidence            7777777666666555444332211110000000000                     0001122455778999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCC
Q 013973          408 RYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       408 ~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      +.||++|||+.|+++||||++.+
T Consensus       267 ~~~P~~R~s~~e~l~~~~~~~~~  289 (298)
T cd07841         267 TLNPNKRITARQALEHPYFSNDP  289 (298)
T ss_pred             cCCcccCcCHHHHhhCccccCCC
Confidence            99999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=9.7e-44  Score=335.20  Aligned_cols=253  Identities=22%  Similarity=0.399  Sum_probs=199.9

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec------
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY------  169 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~------  169 (433)
                      .+.|++.+.||+|+||.||+|.+..+++.||+|++............|+.++..+.    +|+|++++.+.+..      
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~----~h~~i~~~~~~~~~~~~~~~   80 (272)
T cd06637           5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS----HHRNIATYYGAFIKKNPPGM   80 (272)
T ss_pred             hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhc----CCCCeeeEeeEEeecCCCCC
Confidence            46799999999999999999999999999999999765555566778888887763    46789999998864      


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      ...+|+||||+ +++|.+++.......+++..+..++.|++.||.|||+++|+|+||||+||+++.+             
T Consensus        81 ~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~-------------  147 (272)
T cd06637          81 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTEN-------------  147 (272)
T ss_pred             CcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCC-------------
Confidence            35789999999 8899999987555579999999999999999999999999999999999999544             


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCC---CCCceeecCcccchhhhh-----CCCCCCcchhHHHHHHHHHHHhCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGE  320 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~  320 (433)
                                    +.++|+|||++.....   ......|+..|+|||++.     +..++.++|||||||++|||++|.
T Consensus       148 --------------~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~  213 (272)
T cd06637         148 --------------AEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGA  213 (272)
T ss_pred             --------------CCEEEccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCC
Confidence                          4566666666543321   122357899999999986     345888999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHH
Q 013973          321 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  400 (433)
Q Consensus       321 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (433)
                      .||...........+..                      ......                         ....++.++.
T Consensus       214 ~p~~~~~~~~~~~~~~~----------------------~~~~~~-------------------------~~~~~~~~~~  246 (272)
T cd06637         214 PPLCDMHPMRALFLIPR----------------------NPAPRL-------------------------KSKKWSKKFQ  246 (272)
T ss_pred             CCccccCHHHHHHHHhc----------------------CCCCCC-------------------------CCCCcCHHHH
Confidence            99975543322211100                      000000                         0123466899


Q ss_pred             HHHHhccccCCCCCCCHHHHhcCCCC
Q 013973          401 HLLQGLLRYDPTDRLTAREALRHPFF  426 (433)
Q Consensus       401 ~li~~~L~~dP~~R~ta~ell~hp~f  426 (433)
                      +||.+||+.||.+|||+.|++.||||
T Consensus       247 ~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         247 SFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             HHHHHHcCCChhhCCCHHHHhhCCCC
Confidence            99999999999999999999999998

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=1.2e-42  Score=330.16  Aligned_cols=278  Identities=31%  Similarity=0.576  Sum_probs=208.7

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      ++|++.+.||+|+||.||+|.++.+++.||+|++....   ...+.+..|+.+++++     .|+|++.+++.+.....+
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~~~~~~~~~~~~~   75 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQL-----KHPNLVNLIEVFRRKRKL   75 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhC-----CCCCEeeeeeEEeeCCEE
Confidence            36999999999999999999999999999999886322   2234567789998888     568899999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      ++||||+ ++.|..++...  ..+++..++.++.||+.||+|||+.||+|+||||+||+++.++                
T Consensus        76 ~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~----------------  137 (286)
T cd07847          76 HLVFEYCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQG----------------  137 (286)
T ss_pred             EEEEeccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCC----------------
Confidence            9999999 55555555443  3689999999999999999999999999999999999996544                


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                                 .++|+|||++.......   ....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.+.+.
T Consensus       138 -----------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~  206 (286)
T cd07847         138 -----------QIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSD  206 (286)
T ss_pred             -----------cEEECccccceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCCh
Confidence                       45555555554332221   12357889999999876 4578999999999999999999999998887


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      .+....+....+.............  .+...-....+..                ........+..+..+.+||.+||+
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~li~~~l~  268 (286)
T cd07847         207 VDQLYLIRKTLGDLIPRHQQIFSTN--QFFKGLSIPEPET----------------REPLESKFPNISSPALSFLKGCLQ  268 (286)
T ss_pred             HHHHHHHHHHhCCCChHHhhhcccc--cccccccCCCccc----------------ccCHHHHhccCCHHHHHHHHHHhc
Confidence            7777777766666544321111000  0000000000000                000111223457889999999999


Q ss_pred             cCCCCCCCHHHHhcCCCC
Q 013973          409 YDPTDRLTAREALRHPFF  426 (433)
Q Consensus       409 ~dP~~R~ta~ell~hp~f  426 (433)
                      .||++||++.|++.||||
T Consensus       269 ~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         269 MDPTERLSCEELLEHPYF  286 (286)
T ss_pred             CCccccCCHHHHhcCCCC
Confidence            999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=4.7e-43  Score=337.12  Aligned_cols=282  Identities=25%  Similarity=0.391  Sum_probs=204.5

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      +|++.+.||+|+||.||+|.+..++..||+|.+...  ......+..|+++++++     .|+||+++++.+...+.+|+
T Consensus         2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~l   76 (308)
T cd06615           2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHEC-----NSPYIVGFYGAFYSDGEISI   76 (308)
T ss_pred             CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEeeCCEEEE
Confidence            599999999999999999999999999999998643  23345577899999888     66899999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      ||||+ +++|.+++....  .+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.                
T Consensus        77 v~ey~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~----------------  138 (308)
T cd06615          77 CMEHMDGGSLDQVLKKAG--RIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGE----------------  138 (308)
T ss_pred             EeeccCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCc----------------
Confidence            99999 889999998764  79999999999999999999997 68999999999999965554                


Q ss_pred             cccccCCCCCCEEEEecCCccccCC-CCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERP-DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL  332 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~  332 (433)
                                 ++|+|||.+..... .....+|+..|+|||++.+..++.++|+|||||++|+|++|..||...+.....
T Consensus       139 -----------~~l~dfg~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~  207 (308)
T cd06615         139 -----------IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELE  207 (308)
T ss_pred             -----------EEEccCCCcccccccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHH
Confidence                       55555555433211 123347899999999998888999999999999999999999999765533322


Q ss_pred             HHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHh----h-hcCCchhHHHHHHHhcc
Q 013973          333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM----Q-HVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       333 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~li~~~L  407 (433)
                      ..+    +..+.........       ......+............     ......    . ....++.++++||.+||
T Consensus       208 ~~~----~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~~l  271 (308)
T cd06615         208 AMF----GRPVSEGEAKESH-------RPVSGHPPDSPRPMAIFEL-----LDYIVNEPPPKLPSGAFSDEFQDFVDKCL  271 (308)
T ss_pred             Hhh----cCccccccccCCc-------ccccCCCCCccchhhHHHH-----HHHHhcCCCccCcCcccCHHHHHHHHHHc
Confidence            211    1111000000000       0000000000000000000     000000    0 01135678999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCC
Q 013973          408 RYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       408 ~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      +.||++|||+.|+++||||.+.
T Consensus       272 ~~~P~~Rpt~~~ll~~~~~~~~  293 (308)
T cd06615         272 KKNPKERADLKELTKHPFIKRA  293 (308)
T ss_pred             cCChhhCcCHHHHhcChhhhhc
Confidence            9999999999999999999864

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=7e-43  Score=331.67  Aligned_cols=278  Identities=35%  Similarity=0.590  Sum_probs=216.8

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      +|++.+.||+|+||.||+|.+..+++.||+|++....   .....+..|+.+++.+     .|++++++++++.....++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~~~~~   75 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQAC-----QHPYVVKLLDVFPHGSGFV   75 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhC-----CCCCCcceeeEEecCCeeE
Confidence            4899999999999999999999999999999986432   2345677888888888     5788999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          175 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       175 lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      +||||++++|.+++.... ..+++..+..++.||+.||+|||+.||+|+||||+||+++.                    
T Consensus        76 ~v~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~--------------------  134 (286)
T cd07832          76 LVMEYMPSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISA--------------------  134 (286)
T ss_pred             EEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcC--------------------
Confidence            999999999999987654 47999999999999999999999999999999999999954                    


Q ss_pred             ccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCChH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENL  329 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~  329 (433)
                             ++.++|+|||.+.......    ....|+..|+|||++.+. .++.++|||||||++|||++|.+||.+..+.
T Consensus       135 -------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~  207 (286)
T cd07832         135 -------DGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI  207 (286)
T ss_pred             -------CCcEEEeeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH
Confidence                   4456666666655433221    234689999999998754 4689999999999999999999999988888


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +.+..+...++......+.........    +...++....           .    ......+..+.++.+||.+||+.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-----------~----~~~~~~~~~~~~~~~li~~~l~~  268 (286)
T cd07832         208 EQLAIVFRTLGTPNEETWPGLTSLPDY----NKITFPESKP-----------I----PLEEIFPDASPEALDLLKGLLVY  268 (286)
T ss_pred             HHHHHHHHHcCCCChHHHhhccCcchh----hcccCCCCCc-----------c----hHHHhCCCccHHHHHHHHHHhcc
Confidence            877777777776655444332211100    0111111000           0    01112234567899999999999


Q ss_pred             CCCCCCCHHHHhcCCCCC
Q 013973          410 DPTDRLTAREALRHPFFT  427 (433)
Q Consensus       410 dP~~R~ta~ell~hp~f~  427 (433)
                      ||++|||++++|+||||.
T Consensus       269 ~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         269 DPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             ChhhCCCHHHHhhCcCcC
Confidence            999999999999999995

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5e-43  Score=328.55  Aligned_cols=249  Identities=28%  Similarity=0.436  Sum_probs=200.9

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch------hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      ++|++.+.||+|++|.||+|.+..+++.||+|.+....      .....+..|+.+++++     +|++|+++++++...
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~   76 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL-----QHERIVQYYGCLRDD   76 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhC-----CCCCeeeeEEEEccC
Confidence            45999999999999999999999999999999886321      1234566788888877     678999999999999


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      ..+++||||+ +++|.+++....  .+++..+..++.|++.||.|||+.||+|+||||+||+++++              
T Consensus        77 ~~~~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~--------------  140 (263)
T cd06625          77 ETLSIFMEYMPGGSVKDQLKAYG--ALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSA--------------  140 (263)
T ss_pred             CeEEEEEEECCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC--------------
Confidence            9999999999 889999998754  68999999999999999999999999999999999999544              


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCC------CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF  323 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf  323 (433)
                                   +.++|+|||.+.......      ....|+..|+|||++.+..++.++||||||+++|+|++|..||
T Consensus       141 -------------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~  207 (263)
T cd06625         141 -------------GNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPW  207 (263)
T ss_pred             -------------CCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCc
Confidence                         456666666654322111      2245788999999999988999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      ...+.......+....                     ..                          ...+...+.++.+||
T Consensus       208 ~~~~~~~~~~~~~~~~---------------------~~--------------------------~~~~~~~~~~~~~li  240 (263)
T cd06625         208 AEFEAMAAIFKIATQP---------------------TN--------------------------PQLPSHVSPDARNFL  240 (263)
T ss_pred             cccchHHHHHHHhccC---------------------CC--------------------------CCCCccCCHHHHHHH
Confidence            7654433322111000                     00                          011235567899999


Q ss_pred             HhccccCCCCCCCHHHHhcCCCC
Q 013973          404 QGLLRYDPTDRLTAREALRHPFF  426 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~hp~f  426 (433)
                      .+||+.||.+|||+.|+++||||
T Consensus       241 ~~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         241 RRTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             HHHhhcCcccCCCHHHHhhCCCC
Confidence            99999999999999999999998

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=4.3e-43  Score=337.43  Aligned_cols=283  Identities=29%  Similarity=0.448  Sum_probs=216.7

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh---hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC--C
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK---YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR--N  171 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~--~  171 (433)
                      ++|++.+.||+|+||.||+|.+..+++.||+|+++....   .......|+.+++++     .|++++++++++...  +
T Consensus         7 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~   81 (309)
T cd07845           7 TEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNL-----RHPNIVELKEVVVGKHLD   81 (309)
T ss_pred             cceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhC-----CCCCCcceEEEEecCCCC
Confidence            569999999999999999999999999999999863321   122345789999888     668899999988654  5


Q ss_pred             eEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          172 HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       172 ~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      .+++||||++++|.+++.... ..+++..+..++.||+.||.|||+.||+||||||+||++++++               
T Consensus        82 ~~~lv~e~~~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~---------------  145 (309)
T cd07845          82 SIFLVMEYCEQDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKG---------------  145 (309)
T ss_pred             eEEEEEecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC---------------
Confidence            789999999889999987643 4699999999999999999999999999999999999996544               


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                                  .+||+|||.+......   .....++..|+|||++.+ ..++.++|+|||||++|||++|.+||...+
T Consensus       146 ------------~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~  213 (309)
T cd07845         146 ------------CLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKS  213 (309)
T ss_pred             ------------CEEECccceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCC
Confidence                        4555555555433221   112245788999999876 458899999999999999999999999988


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ..+.+..+...++..+..++........    .+.+..+....           .    .........++++.+||.+||
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-----------~----~~~~~~~~~~~~~~~li~~ml  274 (309)
T cd07845         214 EIEQLDLIIQLLGTPNESIWPGFSDLPL----VGKFTLPKQPY-----------N----NLKHKFPWLSEAGLRLLNFLL  274 (309)
T ss_pred             HHHHHHHHHHhcCCCChhhchhhhcccc----cccccccCCCC-----------C----chHHhccccCHHHHHHHHHHh
Confidence            8888888888888776665544322111    00111000000           0    000112235778999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCCC
Q 013973          408 RYDPTDRLTAREALRHPFFTRDHL  431 (433)
Q Consensus       408 ~~dP~~R~ta~ell~hp~f~~~~~  431 (433)
                      +.||++|||+.|+++||||++..+
T Consensus       275 ~~dp~~R~t~~~il~h~~f~~~~~  298 (309)
T cd07845         275 MYDPKKRATAEEALESSYFKEKPL  298 (309)
T ss_pred             cCChhhCcCHHHHhcChhhccCCC
Confidence            999999999999999999986543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-44  Score=300.32  Aligned_cols=279  Identities=30%  Similarity=0.495  Sum_probs=224.4

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      +|.-.++||+|.||+||+|+++.+++.||+|.++-.+   .......+|+-+++.+     .|.||+++++....++.+-
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkel-----khknivrl~dvlhsdkklt   77 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-----KHKNIVRLHDVLHSDKKLT   77 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHh-----hhcceeehhhhhccCceeE
Confidence            4666789999999999999999999999999987432   3356778999999999     5578999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          175 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       175 lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      +|+|||..+|..|..+.+ +.++.+.++.++.|+++||.|+|++++.||||||.|+||+                     
T Consensus        78 lvfe~cdqdlkkyfdsln-g~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin---------------------  135 (292)
T KOG0662|consen   78 LVFEFCDQDLKKYFDSLN-GDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLIN---------------------  135 (292)
T ss_pred             EeHHHhhHHHHHHHHhcC-CcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEec---------------------
Confidence            999999999999988765 4799999999999999999999999999999999999995                     


Q ss_pred             ccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCC-CCCcchhHHHHHHHHHHHh-CCCCCCCCChH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCT-GEALFQTHENL  329 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~  329 (433)
                            .++.+|++|||+++-.+-.-   +..+-|.+|.+|.++.+.+ |+...|+||.||++.|+.. |++.|.+.+..
T Consensus       136 ------~ngelkladfglarafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvd  209 (292)
T KOG0662|consen  136 ------RNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD  209 (292)
T ss_pred             ------cCCcEEecccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHH
Confidence                  45556666666665443322   1125689999999999876 8999999999999999987 89999999999


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +++..|.+.+|.+.++.|+.+.....+.      .+|.              ......-.+..+.+...-+||++++|.-
T Consensus       210 dqlkrif~~lg~p~ed~wps~t~lpdyk------~yp~--------------ypattswsqivp~lns~grdllqkll~c  269 (292)
T KOG0662|consen  210 DQLKRIFRLLGTPTEDQWPSMTKLPDYK------PYPI--------------YPATTSWSQIVPKLNSTGRDLLQKLLKC  269 (292)
T ss_pred             HHHHHHHHHhCCCccccCCccccCCCCc------ccCC--------------ccccchHHHHhhhhcchhHHHHHHHhcc
Confidence            9999999999998877655433221110      0000              0000111122335556779999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCC
Q 013973          410 DPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       410 dP~~R~ta~ell~hp~f~~~  429 (433)
                      +|.+|++|+++|+||||++-
T Consensus       270 np~qrisaeaalqhpyf~d~  289 (292)
T KOG0662|consen  270 NPAQRISAEAALQHPYFSDF  289 (292)
T ss_pred             CcccccCHHHHhcCcccccc
Confidence            99999999999999999863

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=3.4e-43  Score=370.20  Aligned_cols=275  Identities=24%  Similarity=0.438  Sum_probs=212.0

Q ss_pred             cCceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEeccee
Q 013973           91 LGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  167 (433)
Q Consensus        91 ~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~  167 (433)
                      .++...++|++++.||+|+||+||+|.+..+++.||+|++...   ......+..|+.+++.+     .|++|++++++|
T Consensus         7 ~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L-----~HPNIVrl~d~f   81 (1021)
T PTZ00266          7 DGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMREL-----KHKNIVRYIDRF   81 (1021)
T ss_pred             CCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHc-----CCCCcCeEEEEE
Confidence            3455668899999999999999999999999999999998632   33456677899999998     678999999987


Q ss_pred             ec--CCeEEEEEecC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHC-------CceeccCCCCceEeecc
Q 013973          168 DY--RNHICIVFEKL-GSSLYDFLRKNN--YRSFPIDLVREIARQLLECIAFMHDL-------CMIHTDLKPENVLLVSS  235 (433)
Q Consensus       168 ~~--~~~~~lV~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~-------~ivHrDlKp~NILl~~~  235 (433)
                      ..  ...+||||||+ +++|.++|....  ...+++..++.|+.||+.||.|||+.       +||||||||+||||+..
T Consensus        82 ~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~  161 (1021)
T PTZ00266         82 LNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTG  161 (1021)
T ss_pred             EecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecC
Confidence            43  46799999999 899999987531  24699999999999999999999985       49999999999999653


Q ss_pred             CccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhC--CCCCCcchhHHHHH
Q 013973          236 EYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILG--LGWTYPCDIWSVGC  311 (433)
Q Consensus       236 ~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv  311 (433)
                      .. .+.+....         ....+....+||+|||++.......  ...+||+.|+|||++.+  ..++.++|||||||
T Consensus       162 ~~-~lg~i~~~---------~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~  231 (1021)
T PTZ00266        162 IR-HIGKITAQ---------ANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGC  231 (1021)
T ss_pred             cc-cccccccc---------ccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHH
Confidence            21 11110000         0111345679999999987554322  33579999999999965  35889999999999


Q ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhh
Q 013973          312 ILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH  391 (433)
Q Consensus       312 ~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (433)
                      ++|||++|..||...+....+.........+                       +                         
T Consensus       232 ILYELLTGk~PF~~~~~~~qli~~lk~~p~l-----------------------p-------------------------  263 (1021)
T PTZ00266        232 IIYELCSGKTPFHKANNFSQLISELKRGPDL-----------------------P-------------------------  263 (1021)
T ss_pred             HHHHHHHCCCCCCcCCcHHHHHHHHhcCCCC-----------------------C-------------------------
Confidence            9999999999998665544332211100000                       0                         


Q ss_pred             cCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          392 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       392 ~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      ....+.++.+||..||+.+|.+||++.|+|.|||++.
T Consensus       264 i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~  300 (1021)
T PTZ00266        264 IKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKN  300 (1021)
T ss_pred             cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhh
Confidence            1234668999999999999999999999999999974

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.3e-44  Score=342.81  Aligned_cols=252  Identities=26%  Similarity=0.471  Sum_probs=200.0

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEee---cchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~---~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      ..|+++++||+||.+.||++...+. ..||+|.+.   ........+..|+..|.++..+    ..|++++++-..++.+
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s~~-~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~----~~IIqL~DYEv~d~~l  435 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNSDK-QIYALKKVVLLEADNQTLDGYRNEIALLNKLKGH----DKIIQLYDYEVTDGYL  435 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecCCC-cchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCC----ceEEEEeeeeccCceE
Confidence            4699999999999999999986554 456666543   2345566788999999999654    5699999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       174 ~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      ||||||-..+|..+|++... .++.-.+++|..|++.|+.++|+.||||.||||.|+|+.                    
T Consensus       436 YmvmE~Gd~DL~kiL~k~~~-~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV--------------------  494 (677)
T KOG0596|consen  436 YMVMECGDIDLNKILKKKKS-IDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV--------------------  494 (677)
T ss_pred             EEEeecccccHHHHHHhccC-CCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE--------------------
Confidence            99999999999999998753 333348899999999999999999999999999999994                    


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCCCc-----eeecCcccchhhhhCCC-----------CCCcchhHHHHHHHHHHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQNY-----IVSTRHYRAPEVILGLG-----------WTYPCDIWSVGCILVELC  317 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~-----~~gt~~y~aPE~~~~~~-----------~~~~~DvwSlGv~l~ell  317 (433)
                              .|.+||+|||+|.....+.+.     .+||+.||+||.+....           .+.++||||||||||+|+
T Consensus       495 --------kG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMv  566 (677)
T KOG0596|consen  495 --------KGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMV  566 (677)
T ss_pred             --------eeeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHH
Confidence                    367999999999877766543     48999999999997532           567899999999999999


Q ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchh
Q 013973          318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG  397 (433)
Q Consensus       318 tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  397 (433)
                      .|+.||....  .....+..+..+.-                  .+.+|.                          .-+.
T Consensus       567 YgktPf~~~~--n~~aKl~aI~~P~~------------------~Iefp~--------------------------~~~~  600 (677)
T KOG0596|consen  567 YGKTPFGQII--NQIAKLHAITDPNH------------------EIEFPD--------------------------IPEN  600 (677)
T ss_pred             hcCCchHHHH--HHHHHHHhhcCCCc------------------cccccC--------------------------CCCc
Confidence            9999996432  12333333222210                  112222                          2222


Q ss_pred             -HHHHHHHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          398 -DLTHLLQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       398 -~~~~li~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                       ++.++++.||.+||.+||++.+||+|||++-
T Consensus       601 ~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~  632 (677)
T KOG0596|consen  601 DELIDVMKCCLARDPKKRWSIPELLQHPFLQI  632 (677)
T ss_pred             hHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence             3899999999999999999999999999975

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=3e-43  Score=342.87  Aligned_cols=249  Identities=21%  Similarity=0.346  Sum_probs=190.3

Q ss_pred             cCcEEEEeeeeccccEEEEEEEE-----CCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWD-----RERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~-----~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      .++|++.+.||+|+||.||+|.+     ..+++.||+|+++..  ......+..|+.++..+.    +|+||+++++.+.
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----~h~niv~~~~~~~   81 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIG----NHLNVVNLLGACT   81 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhc----cCcceeeEEeEec
Confidence            36799999999999999999975     234568999998643  233456778999988884    4578999999876


Q ss_pred             c-CCeEEEEEecC-CCCHHHHHHhcC------------------------------------------------------
Q 013973          169 Y-RNHICIVFEKL-GSSLYDFLRKNN------------------------------------------------------  192 (433)
Q Consensus       169 ~-~~~~~lV~e~~-~~~L~~~l~~~~------------------------------------------------------  192 (433)
                      . .+.+++||||+ +|+|.+++....                                                      
T Consensus        82 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (338)
T cd05102          82 KPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQ  161 (338)
T ss_pred             CCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccch
Confidence            5 45689999999 999999997532                                                      


Q ss_pred             ------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEE
Q 013973          193 ------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK  266 (433)
Q Consensus       193 ------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~k  266 (433)
                            ...+++..+..++.||+.||+|||++|||||||||+|||++.+                           +.+|
T Consensus       162 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~---------------------------~~~k  214 (338)
T cd05102         162 ETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSEN---------------------------NVVK  214 (338)
T ss_pred             hccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCC---------------------------CcEE
Confidence                  1247888999999999999999999999999999999999544                           4566


Q ss_pred             EEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhC
Q 013973          267 VIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLG  340 (433)
Q Consensus       267 l~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~  340 (433)
                      |+|||+++......     ....+|..|+|||++.+..++.++|||||||++|||++ |..||.+....+.+...     
T Consensus       215 l~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~-----  289 (338)
T cd05102         215 ICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQR-----  289 (338)
T ss_pred             EeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHH-----
Confidence            66666654332111     12245678999999999999999999999999999997 99999865432222111     


Q ss_pred             CCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHH
Q 013973          341 PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA  420 (433)
Q Consensus       341 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~el  420 (433)
                                       +..+..                         ...+...++++.+|+.+||+.||++|||+.|+
T Consensus       290 -----------------~~~~~~-------------------------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el  327 (338)
T cd05102         290 -----------------LKDGTR-------------------------MRAPENATPEIYRIMLACWQGDPKERPTFSAL  327 (338)
T ss_pred             -----------------HhcCCC-------------------------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHH
Confidence                             001100                         00123456789999999999999999999999


Q ss_pred             hc
Q 013973          421 LR  422 (433)
Q Consensus       421 l~  422 (433)
                      ++
T Consensus       328 ~~  329 (338)
T cd05102         328 VE  329 (338)
T ss_pred             HH
Confidence            75

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=1.4e-42  Score=331.44  Aligned_cols=282  Identities=30%  Similarity=0.483  Sum_probs=216.4

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      ++|++.+.||+|++|.||+|.++.+++.||+|.+....   ...+.+..|+++++.+     .|++++++++++.....+
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~   76 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM-----QHGNIVRLQDVVHSEKRL   76 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhc-----cCCCEeeEEEEEecCCeE
Confidence            46999999999999999999999999999999886432   2234567788988888     668899999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       174 ~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      |+||||++++|.+++.......+++..+..++.||+.||+|||++||+|+||||+||+++.+                  
T Consensus        77 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~------------------  138 (294)
T PLN00009         77 YLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRR------------------  138 (294)
T ss_pred             EEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECC------------------
Confidence            99999998899998876554457889999999999999999999999999999999999632                  


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCChH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENL  329 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~  329 (433)
                              +..+||+|||++.......   ....|++.|+|||++.+. .++.++|||||||++|+|++|.+||...+..
T Consensus       139 --------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~  210 (294)
T PLN00009        139 --------TNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI  210 (294)
T ss_pred             --------CCEEEEcccccccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence                    2356777777765432211   223678899999998764 5789999999999999999999999988777


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +....+....+......+..........  .....++.                  ..........+.++.++|.+||+.
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~------------------~~~~~~~~~~~~~~~~~i~~~l~~  270 (294)
T PLN00009        211 DELFKIFRILGTPNEETWPGVTSLPDYK--SAFPKWPP------------------KDLATVVPTLEPAGVDLLSKMLRL  270 (294)
T ss_pred             HHHHHHHHHhCCCChhhccccccchhhh--hhcccCCC------------------CCHHHhCcCCChHHHHHHHHHccC
Confidence            7776666666655544433211110000  00000000                  000111345677899999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCC
Q 013973          410 DPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       410 dP~~R~ta~ell~hp~f~~~  429 (433)
                      ||++||++.++++||||.+-
T Consensus       271 ~P~~Rps~~~~l~~~~~~~~  290 (294)
T PLN00009        271 DPSKRITARAALEHEYFKDL  290 (294)
T ss_pred             ChhhCcCHHHHhcCchHhHH
Confidence            99999999999999999764

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=1e-42  Score=338.92  Aligned_cols=287  Identities=27%  Similarity=0.463  Sum_probs=213.7

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC--
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR--  170 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~--  170 (433)
                      +.++|++.+.||+|+||.||+|.+..+++.||+|++...  .........|+.+++.+     .|+|++++++++...  
T Consensus         3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~   77 (336)
T cd07849           3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRF-----KHENIIGILDIIRPPSF   77 (336)
T ss_pred             cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhC-----CCCCcCchhheeecccc
Confidence            346899999999999999999999999999999998632  23345567788888888     568899998876543  


Q ss_pred             ---CeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC
Q 013973          171 ---NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       171 ---~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                         ...|+||||++++|.+++...   .+++..+..++.||+.||.|||+.||+||||||+|||++.++.++|+|||++.
T Consensus        78 ~~~~~~~lv~e~~~~~l~~~~~~~---~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~  154 (336)
T cd07849          78 ESFNDVYIVQELMETDLYKLIKTQ---HLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLAR  154 (336)
T ss_pred             cccceEEEEehhcccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECccccee
Confidence               468999999988998888653   69999999999999999999999999999999999999666655555555443


Q ss_pred             CCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                      .......                     .........||..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.
T Consensus       155 ~~~~~~~---------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~  213 (336)
T cd07849         155 IADPEHD---------------------HTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGK  213 (336)
T ss_pred             ecccccc---------------------ccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            2211000                     0000112468999999998765 46889999999999999999999999988


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhh-hhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHh
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHA-EKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  405 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  405 (433)
                      +.......+...++..+.+.+....... ..++......                  .... ........+.++.+||.+
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~-~~~~~~~~~~~~~~li~~  274 (336)
T cd07849         214 DYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFK------------------PKVP-WNKLFPNADPKALDLLDK  274 (336)
T ss_pred             CHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcC------------------Cccc-HHHHhcccCcHHHHHHHH
Confidence            8877788888888776655444332111 1111100000                  0000 001122457789999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCC
Q 013973          406 LLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       406 ~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      ||+.||++|||+.|+++||||..-
T Consensus       275 ~l~~dP~~Rpt~~e~l~hp~~~~~  298 (336)
T cd07849         275 MLTFNPHKRITVEEALAHPYLEQY  298 (336)
T ss_pred             HcCCChhhCcCHHHHhcCcccccc
Confidence            999999999999999999999753

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.1e-43  Score=337.40  Aligned_cols=279  Identities=24%  Similarity=0.384  Sum_probs=213.4

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      +|++.+.||+|+||.||+|.+..+++.||+|.+....    .....+..|+++++.+     .|++|+++++.+......
T Consensus         2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~   76 (316)
T cd05574           2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATL-----DHPFLPTLYASFQTETYL   76 (316)
T ss_pred             ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhC-----CCCCchhheeeeecCCEE
Confidence            6999999999999999999999999999999986432    2334566788888887     568899999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      |+||||+ +++|.+++.......+++..+..++.||+.||+|||+.||+|+||||+||+++.++.++|+|||++......
T Consensus        77 ~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~  156 (316)
T cd05574          77 CLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVE  156 (316)
T ss_pred             EEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence            9999999 889999998755567999999999999999999999999999999999999998888888888877654332


Q ss_pred             CcccccCCCCCC-----EE-EEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          253 SSYFKRMPKSSA-----IK-VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       253 ~~~~~~~~~~~~-----~k-l~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                      ............     .+ ...+. ............||..|+|||++.+..++.++||||||+++|+|++|..||.+.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~  235 (316)
T cd05574         157 PPPVSKALRKGSRRSSVNSIPSETF-SEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGS  235 (316)
T ss_pred             ccccccccccccccccccccchhhh-cccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCC
Confidence            211100000000     00 00000 000011112357899999999999988999999999999999999999999876


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      +....+..+...                       ...++.                        ....+.++.++|.+|
T Consensus       236 ~~~~~~~~~~~~-----------------------~~~~~~------------------------~~~~~~~~~~li~~~  268 (316)
T cd05574         236 NRDETFSNILKK-----------------------EVTFPG------------------------SPPVSSSARDLIRKL  268 (316)
T ss_pred             chHHHHHHHhcC-----------------------CccCCC------------------------ccccCHHHHHHHHHH
Confidence            655443322110                       011111                        112567899999999


Q ss_pred             cccCCCCCCC----HHHHhcCCCCCCC
Q 013973          407 LRYDPTDRLT----AREALRHPFFTRD  429 (433)
Q Consensus       407 L~~dP~~R~t----a~ell~hp~f~~~  429 (433)
                      |+.||++|||    ++|+|.||||++.
T Consensus       269 l~~~p~~R~s~~~~~~~ll~~~~~~~~  295 (316)
T cd05574         269 LVKDPSKRLGSKRGAAEIKQHPFFRGV  295 (316)
T ss_pred             ccCCHhHCCCchhhHHHHHcCchhhcC
Confidence            9999999999    9999999999864

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=1.8e-42  Score=323.67  Aligned_cols=249  Identities=25%  Similarity=0.410  Sum_probs=199.1

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec-CCeE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY-RNHI  173 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~-~~~~  173 (433)
                      .|++.+.||+|++|.||++.++.+++.||+|.+...   ....+.+..|+++++++     .|++++.+.+.+.. ...+
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   75 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQL-----KHPNIVAYRESWEGEDGLL   75 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhC-----CCCCeeeeeeeecCCCCEE
Confidence            489999999999999999999999999999998632   22334566788888777     56889999888764 4578


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      |+||||+ +++|.+++.......+++.++..++.|++.||+|||+.||+|+||||+||+++.+                 
T Consensus        76 ~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~-----------------  138 (257)
T cd08223          76 YIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRT-----------------  138 (257)
T ss_pred             EEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecC-----------------
Confidence            9999999 8899999987554579999999999999999999999999999999999999544                 


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChH
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  329 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~  329 (433)
                                +.++|+|||.+......   .....|++.|+|||++.+..++.++|+||||+++|+|++|..||...+..
T Consensus       139 ----------~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~  208 (257)
T cd08223         139 ----------NIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN  208 (257)
T ss_pred             ----------CcEEEecccceEEecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH
Confidence                      45666666655433211   12346889999999999989999999999999999999999999865544


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      .....+...  ..+                                              ..+...+.++.+||.+||+.
T Consensus       209 ~~~~~~~~~--~~~----------------------------------------------~~~~~~~~~~~~li~~~l~~  240 (257)
T cd08223         209 SLVYRIIEG--KLP----------------------------------------------PMPKDYSPELGELIATMLSK  240 (257)
T ss_pred             HHHHHHHhc--CCC----------------------------------------------CCccccCHHHHHHHHHHhcc
Confidence            332222110  000                                              01124567899999999999


Q ss_pred             CCCCCCCHHHHhcCCCC
Q 013973          410 DPTDRLTAREALRHPFF  426 (433)
Q Consensus       410 dP~~R~ta~ell~hp~f  426 (433)
                      ||++|||+.++++||||
T Consensus       241 ~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         241 RPEKRPSVKSILRQPYI  257 (257)
T ss_pred             CcccCCCHHHHhcCCCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=1.4e-42  Score=331.25  Aligned_cols=280  Identities=32%  Similarity=0.527  Sum_probs=210.0

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe-
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH-  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~-  172 (433)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.++...   .....+..|+.+++.+.    +|++++++++.+..... 
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~----~~~~i~~~~~~~~~~~~~   76 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLS----ESIYIVRLLDVEHVEEKN   76 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHcc----CCCCccceeeeEeecCCC
Confidence            36999999999999999999999999999999876322   12345677888888874    34779999988876655 


Q ss_pred             ----EEEEEecCCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcC
Q 013973          173 ----ICIVFEKLGSSLYDFLRKNN---YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  245 (433)
Q Consensus       173 ----~~lV~e~~~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~  245 (433)
                          .|+||||+.++|.+++....   ...+++..++.++.||+.||.|||++||+||||||+||+++.           
T Consensus        77 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~-----------  145 (295)
T cd07837          77 GKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDK-----------  145 (295)
T ss_pred             CCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEec-----------
Confidence                89999999779999887543   236899999999999999999999999999999999999954           


Q ss_pred             CCCCCCCCcccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCC
Q 013973          246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEA  321 (433)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~  321 (433)
                                     .++.+||+|||.+.......   ....+++.|+|||++.+ ..++.++|+||||+++|+|++|..
T Consensus       146 ---------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~  210 (295)
T cd07837         146 ---------------QKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQP  210 (295)
T ss_pred             ---------------CCCeEEEeecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCC
Confidence                           14467777777665332211   12356889999999875 457899999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       322 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      ||.+.+..+.+..+....+..+...+.......... .     .+.           ..    ........+.++.++.+
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~-----------~~----~~~~~~~~~~~~~~~~~  269 (295)
T cd07837         211 LFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWH-E-----FPQ-----------WK----PQDLSRAVPDLSPEGLD  269 (295)
T ss_pred             CCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchh-h-----cCc-----------cc----chhHHHhccccCHHHHH
Confidence            999888777776666655544433322111100000 0     000           00    00011122356788999


Q ss_pred             HHHhccccCCCCCCCHHHHhcCCCCC
Q 013973          402 LLQGLLRYDPTDRLTAREALRHPFFT  427 (433)
Q Consensus       402 li~~~L~~dP~~R~ta~ell~hp~f~  427 (433)
                      ||.+||+.||.+||++.|++.||||+
T Consensus       270 ~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         270 LLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             HHHHHccCChhhcCCHHHHhcCCCcC
Confidence            99999999999999999999999995

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=1.7e-42  Score=323.54  Aligned_cols=249  Identities=26%  Similarity=0.405  Sum_probs=202.9

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      +|.+.+.||+|++|.||+|.+..+++.||+|.+...   ......+..|+++++.+     .|++++++++.+...+..|
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~   75 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKL-----DSSYIIRYYESFLDKGKLN   75 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhc-----CCCCeehheeeeccCCEEE
Confidence            488999999999999999999999999999998632   34456677788888887     6789999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +||||+ +++|.+++.......+++..+..++.|++.||.|||+.||+|+||||+||+++.++                 
T Consensus        76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~-----------------  138 (256)
T cd08529          76 IVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYD-----------------  138 (256)
T ss_pred             EEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCC-----------------
Confidence            999999 89999999876446799999999999999999999999999999999999996544                 


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                                .++|+|||++.......   ....|++.|+|||++.+..++.++|+||||+++|+|++|..||...+..+
T Consensus       139 ----------~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~  208 (256)
T cd08529         139 ----------NVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA  208 (256)
T ss_pred             ----------CEEEcccccceeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                      45555665554332221   22468899999999999889999999999999999999999998766444


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+..                       +...                         .....++.++.++|.+||+.+
T Consensus       209 ~~~~~~~-----------------------~~~~-------------------------~~~~~~~~~~~~~i~~~l~~~  240 (256)
T cd08529         209 LILKIIR-----------------------GVFP-------------------------PVSQMYSQQLAQLIDQCLTKD  240 (256)
T ss_pred             HHHHHHc-----------------------CCCC-------------------------CCccccCHHHHHHHHHHccCC
Confidence            3322111                       0000                         011234668999999999999


Q ss_pred             CCCCCCHHHHhcCCCC
Q 013973          411 PTDRLTAREALRHPFF  426 (433)
Q Consensus       411 P~~R~ta~ell~hp~f  426 (433)
                      |++||++.++++|||+
T Consensus       241 p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         241 YRQRPDTFQLLRNPSL  256 (256)
T ss_pred             cccCcCHHHHhhCCCC
Confidence            9999999999999996

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=7.2e-43  Score=331.28  Aligned_cols=253  Identities=24%  Similarity=0.413  Sum_probs=200.6

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee------c
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD------Y  169 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~------~  169 (433)
                      .+.|++.+.||+|+||.||+|.+..+++.||+|++.........+..|+.+++++.    +|+|++++++++.      .
T Consensus        15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~----~h~~i~~~~~~~~~~~~~~~   90 (282)
T cd06636          15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYS----HHRNIATYYGAFIKKSPPGH   90 (282)
T ss_pred             hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhc----CCCcEEEEeeehhcccccCC
Confidence            36799999999999999999999999999999998765555556777888887773    4678999998874      3


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      ...+|+||||+ +++|.+++.......+++..+..++.||+.||.|||+.||+|+||||+||+++.              
T Consensus        91 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~--------------  156 (282)
T cd06636          91 DDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTE--------------  156 (282)
T ss_pred             CCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--------------
Confidence            56899999999 789999998755556899999999999999999999999999999999999954              


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCC---CCCceeecCcccchhhhh-----CCCCCCcchhHHHHHHHHHHHhCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGE  320 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~  320 (433)
                                   ++.++|+|||.+.....   ......|+..|+|||++.     ...++.++|+|||||++|||++|.
T Consensus       157 -------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~  223 (282)
T cd06636         157 -------------NAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGA  223 (282)
T ss_pred             -------------CCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCC
Confidence                         44577777776653321   123357899999999986     345888999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHH
Q 013973          321 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  400 (433)
Q Consensus       321 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (433)
                      .||...........+...                      .....                         ....++.++.
T Consensus       224 ~p~~~~~~~~~~~~~~~~----------------------~~~~~-------------------------~~~~~~~~~~  256 (282)
T cd06636         224 PPLCDMHPMRALFLIPRN----------------------PPPKL-------------------------KSKKWSKKFI  256 (282)
T ss_pred             CCccccCHHhhhhhHhhC----------------------CCCCC-------------------------cccccCHHHH
Confidence            999765443322111000                      00000                         0123567899


Q ss_pred             HHHHhccccCCCCCCCHHHHhcCCCC
Q 013973          401 HLLQGLLRYDPTDRLTAREALRHPFF  426 (433)
Q Consensus       401 ~li~~~L~~dP~~R~ta~ell~hp~f  426 (433)
                      +||.+||+.||.+|||+.|+++||||
T Consensus       257 ~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         257 DFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             HHHHHHhCCChhhCcCHHHHhcCCCC
Confidence            99999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=3.2e-42  Score=326.93  Aligned_cols=277  Identities=30%  Similarity=0.501  Sum_probs=215.2

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      +|++.+.||.|++|.||+|++..+++.||||+++...  ........|+.+++++     .|+|++++++.+...+..++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~l   75 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKEL-----KHENIVRLHDVIHTENKLML   75 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhh-----cCCCEeeeeeeEeeCCcEEE
Confidence            4899999999999999999999999999999986432  2234566789999888     56889999999999999999


Q ss_pred             EEecCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKLGSSLYDFLRKNN-YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      ||||+.++|.+++.... ...+++..+..++.||+.||.|||+.||+||||||+||+++++                   
T Consensus        76 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~-------------------  136 (284)
T cd07836          76 VFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKR-------------------  136 (284)
T ss_pred             EEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCC-------------------
Confidence            99999779999887643 2468999999999999999999999999999999999999544                   


Q ss_pred             ccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                              +.++|+|||.+......   .....+|..|+|||++.+. .++.++|+|||||++|+|++|..||.+.+..+
T Consensus       137 --------~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~  208 (284)
T cd07836         137 --------GELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED  208 (284)
T ss_pred             --------CcEEEeecchhhhhcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH
Confidence                    45666666665432221   1223578899999998764 57899999999999999999999999888877


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+...........++.+... ..+..    ..+...               ........+..+.++.++|.+||+.|
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~---------------~~~~~~~~~~~~~~~~~~i~~~l~~~  268 (284)
T cd07836         209 QLLKIFRIMGTPTESTWPGISQL-PEYKP----TFPRYP---------------PQDLQQLFPHADPLGIDLLHRLLQLN  268 (284)
T ss_pred             HHHHHHHHhCCCChhhHHHHhcC-chhcc----cccCCC---------------hHHHHHHhhhcCcHHHHHHHHHhcCC
Confidence            77777777666665554443311 11100    000000               00111122345778999999999999


Q ss_pred             CCCCCCHHHHhcCCCC
Q 013973          411 PTDRLTAREALRHPFF  426 (433)
Q Consensus       411 P~~R~ta~ell~hp~f  426 (433)
                      |.+||++.|+++||||
T Consensus       269 p~~R~~~~~~l~~~~f  284 (284)
T cd07836         269 PELRISAHDALQHPWF  284 (284)
T ss_pred             cccCCCHHHHhcCCCC
Confidence            9999999999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-42  Score=333.79  Aligned_cols=289  Identities=29%  Similarity=0.495  Sum_probs=210.1

Q ss_pred             cEEEEeeeeccccEEEEEEEECC--CCeEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC-
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRE--RKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR-  170 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~--~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~-  170 (433)
                      +|++.+.||+|+||.||+|.+..  +++.||+|.+...    .........|+.+++.+     .|++++++++++.+. 
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~   75 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLREL-----KHENVVSLVEVFLEHA   75 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhc-----CCCCccceEEEEeCCC
Confidence            48899999999999999999988  8899999998752    22335567788888888     678999999999888 


Q ss_pred             -CeEEEEEecCCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCC
Q 013973          171 -NHICIVFEKLGSSLYDFLRKNN---YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  246 (433)
Q Consensus       171 -~~~~lV~e~~~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~  246 (433)
                       ..+++||||++++|.+++....   ...+++..+..++.||+.||.|||+.+|+||||||+|||++.++          
T Consensus        76 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~----------  145 (316)
T cd07842          76 DKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEG----------  145 (316)
T ss_pred             CceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCC----------
Confidence             8899999999888888775332   13689999999999999999999999999999999999997622          


Q ss_pred             CCCCCCCcccccCCCCCCEEEEecCCccccCCC------CCceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhC
Q 013973          247 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD------QNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTG  319 (433)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg  319 (433)
                                   +.++.+||+|||++......      .....+|..|+|||++.+. .++.++|||||||++|+|++|
T Consensus       146 -------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~  212 (316)
T cd07842         146 -------------PERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTL  212 (316)
T ss_pred             -------------CccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhc
Confidence                         22455666666665533221      1234688999999988764 588999999999999999999


Q ss_pred             CCCCCCCChH---------HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhh
Q 013973          320 EALFQTHENL---------EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ  390 (433)
Q Consensus       320 ~~Pf~~~~~~---------~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (433)
                      .+||.+....         ..+..+...++......+.......+...........  ...         ...+... ..
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---------~~~~~~~-~~  280 (316)
T cd07842         213 EPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTK--TYP---------SNSLAKW-ME  280 (316)
T ss_pred             CCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCC--CCC---------CccHHHH-HH
Confidence            9999865432         2344455555555544443322221110000000000  000         0000111 11


Q ss_pred             hcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCC
Q 013973          391 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF  426 (433)
Q Consensus       391 ~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f  426 (433)
                      .....+.++.++|.+||+.||++|||+.|+++||||
T Consensus       281 ~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         281 KHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             hccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence            113567789999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=2.3e-42  Score=327.41  Aligned_cols=275  Identities=32%  Similarity=0.556  Sum_probs=213.0

Q ss_pred             EEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh--hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC--CeEE
Q 013973           99 YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR--NHIC  174 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~--~~~~  174 (433)
                      |+++++||+|+||.||+|.+..+++.||+|+++....  .......|+.++.++.    +|+|++++++.+.+.  +.++
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~----~h~~i~~~~~~~~~~~~~~~~   76 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLS----PHPNILRLIEVLFDRKTGRLA   76 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcC----CCCCccceEEEEecCCCCcEE
Confidence            6789999999999999999999999999999864321  1223345776666662    468899999999887  8999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          175 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       175 lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      +||||+.++|.+++.... ..+++..+..++.||+.||+|||+.||+||||||+||+++                     
T Consensus        77 lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~---------------------  134 (282)
T cd07831          77 LVFELMDMNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIK---------------------  134 (282)
T ss_pred             EEEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEc---------------------
Confidence            999999889999887643 3689999999999999999999999999999999999994                     


Q ss_pred             ccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                            . +.+||+|||.+.......  ....++..|+|||++.. ..++.++|+|||||++|||++|.+||.+.+..+.
T Consensus       135 ------~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~  207 (282)
T cd07831         135 ------D-DILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQ  207 (282)
T ss_pred             ------C-CCeEEEecccccccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHH
Confidence                  3 567777777765443222  23467899999998754 4578999999999999999999999999888888


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      +..+....+..+..+.......     ....+.++....               ..+.......+.++.+||.+||++||
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~li~~~l~~~P  267 (282)
T cd07831         208 IAKIHDVLGTPDAEVLKKFRKS-----RHMNYNFPSKKG---------------TGLRKLLPNASAEGLDLLKKLLAYDP  267 (282)
T ss_pred             HHHHHHHcCCCCHHHHHhhccc-----ccccccCccccc---------------ccHHHHcccccHHHHHHHHHHhccCc
Confidence            8888888888777663322111     011111111110               01111223567899999999999999


Q ss_pred             CCCCCHHHHhcCCCC
Q 013973          412 TDRLTAREALRHPFF  426 (433)
Q Consensus       412 ~~R~ta~ell~hp~f  426 (433)
                      ++||++.++++||||
T Consensus       268 ~~R~~~~~~l~~~~~  282 (282)
T cd07831         268 DERITAKQALRHPYF  282 (282)
T ss_pred             ccccCHHHHhhCCCC
Confidence            999999999999998

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.5e-42  Score=337.08  Aligned_cols=281  Identities=28%  Similarity=0.517  Sum_probs=221.1

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      +.++|++++.||+|+||.||+|.+..+++.||+|++...   ......+..|+.+++.+     .|++|+++++.+....
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~   87 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-----KHENVIGLLDVFTPDL   87 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhc-----CCCCccceeeeecCCc
Confidence            467899999999999999999999999999999998532   22334567899999888     6688999999886543


Q ss_pred             ------eEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcC
Q 013973          172 ------HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  245 (433)
Q Consensus       172 ------~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~  245 (433)
                            .+++||||++++|.+++...   .+++..++.++.||+.||+|||+.||+||||||+||+++            
T Consensus        88 ~~~~~~~~~lv~e~~~~~l~~~~~~~---~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~------------  152 (343)
T cd07880          88 SLDRFHDFYLVMPFMGTDLGKLMKHE---KLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVN------------  152 (343)
T ss_pred             cccccceEEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc------------
Confidence                  46999999999999888643   699999999999999999999999999999999999994            


Q ss_pred             CCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCC
Q 013973          246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                                     .++.++|+|||.+...........+++.|+|||++.+ ..++.++|+|||||++|+|++|..||.
T Consensus       153 ---------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~  217 (343)
T cd07880         153 ---------------EDCELKILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFK  217 (343)
T ss_pred             ---------------CCCCEEEeecccccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence                           4456777777777655444444568999999999876 458899999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCCHHHHHHHhhhhh-hhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          325 THENLEHLAMMERVLGPLPQHMLKRVDRHAE-KYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       325 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      ..+....+..+....+..+..+...+..... .++..-                 ....  ...........+.++.++|
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~--~~~~~~~~~~~~~~~~~li  278 (343)
T cd07880         218 GHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKL-----------------PRFR--KKDFRSLLPNANPLAVNVL  278 (343)
T ss_pred             CCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhc-----------------cccC--cchHHHhccCCChHHHHHH
Confidence            8887777777777777777666554432211 111000                 0000  0011122346677899999


Q ss_pred             HhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          404 QGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      .+||+.||++|||+.+++.||||+..
T Consensus       279 ~~~l~~dP~~R~t~~~~l~~~~~~~~  304 (343)
T cd07880         279 EKMLVLDAESRITAAEALAHPYFEEF  304 (343)
T ss_pred             HHHcCCChhhCCCHHHHhcCccHhhh
Confidence            99999999999999999999999753

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=3.4e-42  Score=328.22  Aligned_cols=280  Identities=26%  Similarity=0.431  Sum_probs=209.0

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ++|++++.||+|+||.||+|.+..+++.||+|++....  ........|+.+++.+     .|+|++++.+++......|
T Consensus         5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~ni~~~~~~~~~~~~~~   79 (291)
T cd07870           5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGL-----KHANIVLLHDIIHTKETLT   79 (291)
T ss_pred             ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhc-----CCCCEeEEEEEEecCCeEE
Confidence            56999999999999999999999999999999986432  2223456788888888     6688999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          175 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       175 lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      +||||++++|.+++.... ..+++..+..++.||+.||.|||+.||+|+||||+|||++.                    
T Consensus        80 lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~--------------------  138 (291)
T cd07870          80 FVFEYMHTDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISY--------------------  138 (291)
T ss_pred             EEEecccCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcC--------------------
Confidence            999999888888876543 36888999999999999999999999999999999999954                    


Q ss_pred             ccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCh-H
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN-L  329 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~~~~~-~  329 (433)
                             ++.++|+|||.+......   .....+++.|+|||++.+. .++.++|+|||||++|+|++|..||.+.+. .
T Consensus       139 -------~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~  211 (291)
T cd07870         139 -------LGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVF  211 (291)
T ss_pred             -------CCcEEEeccccccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHH
Confidence                   445666666665432211   1223578999999998764 578999999999999999999999976543 4


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +.+..+...++.++...+..................+.               .+. ...... ..+.++.+|+.+||+.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~-~~~~~~-~~~~~~~~ll~~~l~~  274 (291)
T cd07870         212 EQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQ---------------QLR-VVWKRL-SRPPKAEDLASQMLMM  274 (291)
T ss_pred             HHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCc---------------chh-hhcccc-CCChHHHHHHHHHhCc
Confidence            55666666666665555444332111100000000000               000 000000 1256789999999999


Q ss_pred             CCCCCCCHHHHhcCCCC
Q 013973          410 DPTDRLTAREALRHPFF  426 (433)
Q Consensus       410 dP~~R~ta~ell~hp~f  426 (433)
                      ||.+|||+.|++.||||
T Consensus       275 dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         275 FPKDRISAQDALLHPYF  291 (291)
T ss_pred             CcccCcCHHHHhcCCCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=2.4e-42  Score=328.30  Aligned_cols=280  Identities=34%  Similarity=0.643  Sum_probs=217.9

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.++..   ....+.+..|+++++.+     .|++++++++.+...+..
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~   75 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQL-----RHENIVNLKEAFRRKGRL   75 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhc-----CCCCeeehhheEEECCEE
Confidence            3699999999999999999999999999999988642   23346678899999988     568899999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       174 ~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      ++||||+++++.+.+.... ..+++..+..++.||+.||.|||+.||+|+||||+||+++                    
T Consensus        76 ~iv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~--------------------  134 (288)
T cd07833          76 YLVFEYVERTLLELLEASP-GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVS--------------------  134 (288)
T ss_pred             EEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC--------------------
Confidence            9999999555554443332 3689999999999999999999999999999999999994                    


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                             .++.+||+|||.+.......    ....|+..|+|||++.+. .++.++|+||||+++|+|++|.+||.+.+.
T Consensus       135 -------~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~  207 (288)
T cd07833         135 -------ESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSD  207 (288)
T ss_pred             -------CCCCEEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence                   45567777777765443322    234678999999999888 789999999999999999999999998888


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      .+.+..+...++.++.............   .+ ...++..             ........++..++.++.+||++||+
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~-------------~~~~~~~~~~~~~~~~~~~li~~~l~  270 (288)
T cd07833         208 IDQLYLIQKCLGPLPPSHQELFSSNPRF---AG-VAFPEPS-------------QPESLERRYPGKVSSPALDFLKACLR  270 (288)
T ss_pred             HHHHHHHHHHhCCCCHHHhhhcccCccc---cc-cccCCCC-------------CcHHHHHhcCCccchHHHHHHHHHhc
Confidence            8888888888888777554432211100   00 0000000             00111112234458899999999999


Q ss_pred             cCCCCCCCHHHHhcCCCC
Q 013973          409 YDPTDRLTAREALRHPFF  426 (433)
Q Consensus       409 ~dP~~R~ta~ell~hp~f  426 (433)
                      .||++|||++++++||||
T Consensus       271 ~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         271 MDPKERLTCDELLQHPYF  288 (288)
T ss_pred             cCchhcccHHHHhcCCCC
Confidence            999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=1.9e-42  Score=332.58  Aligned_cols=287  Identities=25%  Similarity=0.475  Sum_probs=211.3

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC---
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR---  170 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~---  170 (433)
                      ++|++.++||+|+||.||+|.+..+++.||||.+....   ........|+.+++.+     .|++++++++++...   
T Consensus        12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~   86 (310)
T cd07865          12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLL-----KHENVVNLIEICRTKATP   86 (310)
T ss_pred             hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhC-----CCCCccceEEEEeccccc
Confidence            56999999999999999999999999999999885321   2223445688888888     568899998887654   


Q ss_pred             -----CeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcC
Q 013973          171 -----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  245 (433)
Q Consensus       171 -----~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~  245 (433)
                           ...++||||++++|.+++.... ..+++.++..++.||+.||+|||++||+|+||||+||+++.++.++|+|||+
T Consensus        87 ~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~  165 (310)
T cd07865          87 YNRYKGSFYLVFEFCEHDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGL  165 (310)
T ss_pred             ccCCCceEEEEEcCCCcCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCC
Confidence                 3569999999889998887653 3689999999999999999999999999999999999996665555555554


Q ss_pred             CCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCC
Q 013973          246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                      +.........                    .........++..|+|||++.+. .++.++|+||||+++|+|++|..||.
T Consensus       166 ~~~~~~~~~~--------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~  225 (310)
T cd07865         166 ARAFSLSKNS--------------------KPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQ  225 (310)
T ss_pred             cccccCCccc--------------------CCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCC
Confidence            4322111000                    00001123578899999998765 47899999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHH
Q 013973          325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  404 (433)
Q Consensus       325 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  404 (433)
                      +.+.......+....+..+..+++........  .  ....+....  ...         ....  .....+..+.+||.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~--~~~---------~~~l--~~~~~~~~~~dli~  288 (310)
T cd07865         226 GNTEQHQLTLISQLCGSITPEVWPGVDKLELF--K--KMELPQGQK--RKV---------KERL--KPYVKDPHALDLID  288 (310)
T ss_pred             CCCHHHHHHHHHHHhCCCChhhcccccchhhh--h--hccCCCccc--hhh---------HHhc--ccccCCHHHHHHHH
Confidence            98888888888888888887665443211100  0  000111000  000         0000  01123567899999


Q ss_pred             hccccCCCCCCCHHHHhcCCCC
Q 013973          405 GLLRYDPTDRLTAREALRHPFF  426 (433)
Q Consensus       405 ~~L~~dP~~R~ta~ell~hp~f  426 (433)
                      +||+.||.+|||++|+|+||||
T Consensus       289 ~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         289 KLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             HHhcCChhhccCHHHHhcCCCC
Confidence            9999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.4e-42  Score=338.86  Aligned_cols=282  Identities=27%  Similarity=0.497  Sum_probs=221.7

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      +.++|++.+.||+|++|.||+|++..+++.||+|++...   .........|+.+++.+     .|++++.+.+.+....
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~   87 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHM-----DHENVIGLLDVFTPAS   87 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhc-----cCCCHHHHHHHhhccc
Confidence            457899999999999999999999999999999988632   22334566788888888     5688999888776655


Q ss_pred             e------EEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcC
Q 013973          172 H------ICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  245 (433)
Q Consensus       172 ~------~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~  245 (433)
                      .      .|+|+||++++|.+++...   .+++..+..++.||+.||.|||+.||+||||||+||++++           
T Consensus        88 ~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~-----------  153 (343)
T cd07851          88 SLEDFQDVYLVTHLMGADLNNIVKCQ---KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE-----------  153 (343)
T ss_pred             cccccccEEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC-----------
Confidence            4      9999999999999998753   6999999999999999999999999999999999999954           


Q ss_pred             CCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCC
Q 013973          246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                                      ++.++|+|||.+...........+|..|+|||.+.+ ..++.++|||||||++|+|++|+.||.
T Consensus       154 ----------------~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~  217 (343)
T cd07851         154 ----------------DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFP  217 (343)
T ss_pred             ----------------CCCEEEccccccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence                            456777777777654444444578899999999876 367899999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCCHHHHHHHhhhhh-hhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          325 THENLEHLAMMERVLGPLPQHMLKRVDRHAE-KYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       325 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      +.+..+.+..+...++..++.++..+..... .++.......                   ...........+.++.+||
T Consensus       218 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~s~~l~dli  278 (343)
T cd07851         218 GSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMP-------------------KKDFKEVFSGANPLAIDLL  278 (343)
T ss_pred             CCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccC-------------------CCCHHHHhccCCHHHHHHH
Confidence            8888888888888888777766655432211 1111000000                   0001111234577899999


Q ss_pred             HhccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          404 QGLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      .+||+.||++|||+.||++||||.+-.
T Consensus       279 ~~~l~~~P~~Rpt~~ell~h~~~~~~~  305 (343)
T cd07851         279 EKMLVLDPDKRITAAEALAHPYLAEYH  305 (343)
T ss_pred             HHhCCCChhhCCCHHHHhcCCCccccC
Confidence            999999999999999999999997643

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.9e-42  Score=337.20  Aligned_cols=282  Identities=29%  Similarity=0.511  Sum_probs=215.8

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC-
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR-  170 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~-  170 (433)
                      +.++|++.+.||+|+||.||+|.+..+++.||||.+...   .........|+.+++.+     .|+|++++++++... 
T Consensus         3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~ni~~~~~~~~~~~   77 (337)
T cd07858           3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHL-----DHENVIAIKDIMPPPH   77 (337)
T ss_pred             cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhc-----CCCCccchHHheeccc
Confidence            346799999999999999999999999999999988632   22334556788888887     678899999887644 


Q ss_pred             ----CeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCC
Q 013973          171 ----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  246 (433)
Q Consensus       171 ----~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~  246 (433)
                          ..+|+||||++++|.+++...+  .+++..+..++.||+.||.|||+++|+||||||+||+++.++          
T Consensus        78 ~~~~~~~~lv~e~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~----------  145 (337)
T cd07858          78 REAFNDVYIVYELMDTDLHQIIRSSQ--TLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANC----------  145 (337)
T ss_pred             ccccCcEEEEEeCCCCCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC----------
Confidence                3589999999889999987654  799999999999999999999999999999999999996554          


Q ss_pred             CCCCCCCcccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCC
Q 013973          247 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEAL  322 (433)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~P  322 (433)
                                       .+||+|||++......   .....||..|+|||.+.+ ..++.++|+|||||++|+|++|+.|
T Consensus       146 -----------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~p  208 (337)
T cd07858         146 -----------------DLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPL  208 (337)
T ss_pred             -----------------CEEECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCC
Confidence                             4555555555433221   122367889999999875 4688999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHh-hhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          323 FQTHENLEHLAMMERVLGPLPQHMLKRVD-RHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       323 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      |.+.+.......+....+..+...+.... .....++....                 ....  .......+.++.++.+
T Consensus       209 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~--~~~~~~~~~~~~~~~~  269 (337)
T cd07858         209 FPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLP-----------------YTPR--QSFARLFPHANPLAID  269 (337)
T ss_pred             CCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcC-----------------cccc--cCHHHHcccCCHHHHH
Confidence            99888777788888888877665432211 11111111000                 0000  0001123457788999


Q ss_pred             HHHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          402 LLQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       402 li~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      ||.+||+.||++|||+.|+++||||...
T Consensus       270 li~~~l~~~P~~Rps~~ell~h~~~~~~  297 (337)
T cd07858         270 LLEKMLVFDPSKRITVEEALAHPYLASL  297 (337)
T ss_pred             HHHHHhcCChhhccCHHHHHcCcchhhh
Confidence            9999999999999999999999999753

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=1e-42  Score=338.56  Aligned_cols=289  Identities=26%  Similarity=0.482  Sum_probs=218.6

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceee----
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD----  168 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~----  168 (433)
                      .++|++.+.||+|+||.||+|.++.+++.||+|++....   .....+..|+.+++.+     .|++|+++++++.    
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~   78 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHF-----KHDNIIAIRDILRPPGA   78 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhc-----CCCCccCHHHhccccCC
Confidence            367999999999999999999999999999999986421   2344566788888888     5788999988875    


Q ss_pred             cCCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          169 YRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       169 ~~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      ....+++||||++++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||+++++.++|+|||++..
T Consensus        79 ~~~~~~lv~e~~~~~l~~~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~  156 (334)
T cd07855          79 DFKDVYVVMDLMESDLHHIIHSDQ--PLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARG  156 (334)
T ss_pred             CCceEEEEEehhhhhHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEeccccccee
Confidence            345789999999889999987654  699999999999999999999999999999999999996655555555544322


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                      .......                    .........|+..|+|||++.+ ..++.++|||||||++|||++|+.||.+.+
T Consensus       157 ~~~~~~~--------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~  216 (334)
T cd07855         157 LSSSPTE--------------------HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKN  216 (334)
T ss_pred             ecccCcC--------------------CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCC
Confidence            2110000                    0000122368899999999876 458999999999999999999999999988


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhh-hhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHA-EKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      ....+..+...+|.++.+.+....... ..++..    ++....               ..........+.++.++|.+|
T Consensus       217 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~---------------~~~~~~~~~~~~~~~~li~~~  277 (334)
T cd07855         217 YVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQN----LPRKQP---------------VPWSKIFPKASPEALDLLSQM  277 (334)
T ss_pred             hHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhh----cccCCC---------------CCHHHHcccCCHHHHHHHHHH
Confidence            888888888888888877765543221 111110    000000               000112234578899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      |+.||++|||+.+++.||||.+.+
T Consensus       278 l~~~P~~Rpt~~~~l~~~~~~~~~  301 (334)
T cd07855         278 LQFDPEERITVEQALQHPFLAQYH  301 (334)
T ss_pred             ccCChhhCcCHHHHHhChhhhhcc
Confidence            999999999999999999997543

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=1.3e-42  Score=329.21  Aligned_cols=256  Identities=23%  Similarity=0.393  Sum_probs=199.1

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      +|++++.||+|+||.||+|.+..+++.||+|++...  ......+..|+.+++++     +|++++++++.+...+..++
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~l   76 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKC-----DSPYIIGFYGAFFVENRISI   76 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhC-----CCCCeeeEEEEEEECCEEEE
Confidence            588999999999999999999999999999998643  23345677899988888     67899999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      ||||+ +++|..+.      .+++..+..++.|++.||.|||+.||+|+||||+|||++.                    
T Consensus        77 v~e~~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~--------------------  130 (279)
T cd06619          77 CTEFMDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNT--------------------  130 (279)
T ss_pred             EEecCCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECC--------------------
Confidence            99999 78876542      5789999999999999999999999999999999999954                    


Q ss_pred             ccccCCCCCCEEEEecCCccccCCC-CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPD-QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA  333 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~  333 (433)
                             ++.++|+|||++...... ....+||..|+|||++.+..++.++|+|||||++|+|++|..||......+...
T Consensus       131 -------~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~  203 (279)
T cd06619         131 -------RGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSL  203 (279)
T ss_pred             -------CCCEEEeeCCcceecccccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccccc
Confidence                   455777777766543222 234578999999999999899999999999999999999999996522111000


Q ss_pred             HHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCC
Q 013973          334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  413 (433)
Q Consensus       334 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  413 (433)
                              .+.......       ........                         .....+.++.+||.+||+.||++
T Consensus       204 --------~~~~~~~~~-------~~~~~~~~-------------------------~~~~~~~~~~~li~~~l~~~P~~  243 (279)
T cd06619         204 --------MPLQLLQCI-------VDEDPPVL-------------------------PVGQFSEKFVHFITQCMRKQPKE  243 (279)
T ss_pred             --------chHHHHHHH-------hccCCCCC-------------------------CCCcCCHHHHHHHHHHhhCChhh
Confidence                    000000000       00000000                         01235668999999999999999


Q ss_pred             CCCHHHHhcCCCCCCCCC
Q 013973          414 RLTAREALRHPFFTRDHL  431 (433)
Q Consensus       414 R~ta~ell~hp~f~~~~~  431 (433)
                      ||++.|+++||||.....
T Consensus       244 Rp~~~eil~~~~~~~~~~  261 (279)
T cd06619         244 RPAPENLMDHPFIVQYND  261 (279)
T ss_pred             CCCHHHHhcCcccccccC
Confidence            999999999999986543

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=1.7e-42  Score=331.38  Aligned_cols=252  Identities=26%  Similarity=0.432  Sum_probs=202.6

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      .+|++.+.||+|+||.||+|++..+++.||+|.+.... ...+.+..|+.+++.+     .|+|++++++.+....+.|+
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~-----~h~~v~~~~~~~~~~~~~~l   94 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-----KNPNIVNYLDSYLVGDELWV   94 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhC-----CCCCEeeEEEEEEeCCEEEE
Confidence            57999999999999999999999999999999886432 2345567788888877     67899999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      ||||+ +++|.+++...   .+++.++..++.|++.||.|||+.||+||||||+|||++.++                  
T Consensus        95 v~e~~~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~------------------  153 (296)
T cd06654          95 VMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG------------------  153 (296)
T ss_pred             eecccCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC------------------
Confidence            99999 89999998653   589999999999999999999999999999999999995444                  


Q ss_pred             ccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                               .++|+|||.+.......   ....|++.|+|||.+.+..++.++|+|||||++|+|++|..||...+....
T Consensus       154 ---------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~  224 (296)
T cd06654         154 ---------SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA  224 (296)
T ss_pred             ---------CEEECccccchhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh
Confidence                     56666666554332211   224688999999999988899999999999999999999999986654332


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      ...+..                      .+...                        ...+...+..+.+||.+||+.||
T Consensus       225 ~~~~~~----------------------~~~~~------------------------~~~~~~~~~~l~~li~~~l~~~p  258 (296)
T cd06654         225 LYLIAT----------------------NGTPE------------------------LQNPEKLSAIFRDFLNRCLDMDV  258 (296)
T ss_pred             HHHHhc----------------------CCCCC------------------------CCCccccCHHHHHHHHHHCcCCc
Confidence            221110                      00000                        00112455678999999999999


Q ss_pred             CCCCCHHHHhcCCCCCCC
Q 013973          412 TDRLTAREALRHPFFTRD  429 (433)
Q Consensus       412 ~~R~ta~ell~hp~f~~~  429 (433)
                      ++|||+.++++||||...
T Consensus       259 ~~Rpt~~eil~~~~~~~~  276 (296)
T cd06654         259 EKRGSAKELLQHQFLKIA  276 (296)
T ss_pred             ccCcCHHHHhhChhhhcc
Confidence            999999999999999764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=1.5e-42  Score=329.16  Aligned_cols=254  Identities=25%  Similarity=0.457  Sum_probs=201.5

Q ss_pred             EEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEE
Q 013973           99 YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  177 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~  177 (433)
                      |++.+.||+|+||.||+|.+..++..+|+|.+... ......+..|+++++.+     .|+|++.+++.+...+..++||
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-----~h~~ii~~~~~~~~~~~~~~v~   81 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASC-----DHPNIVKLLDAFYYENNLWILI   81 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHC-----CCCCeeeEEEEEeeCCEEEEEE
Confidence            68889999999999999999999999999998643 23345567788888887     6789999999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCccc
Q 013973          178 EKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  256 (433)
Q Consensus       178 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~  256 (433)
                      ||+ +++|.+++.... ..+++..+..++.|++.||.|||+.||+||||||+|||++.++                    
T Consensus        82 e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~--------------------  140 (282)
T cd06643          82 EFCAGGAVDAVMLELE-RPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDG--------------------  140 (282)
T ss_pred             EecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCC--------------------
Confidence            999 889988876533 4699999999999999999999999999999999999995544                    


Q ss_pred             ccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhh-----CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          257 KRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       257 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                             .++|+|||++......   .....||..|+|||++.     +..++.++|+|||||++|+|++|.+||...+.
T Consensus       141 -------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~  213 (282)
T cd06643         141 -------DIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP  213 (282)
T ss_pred             -------CEEEccccccccccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH
Confidence                   4555555555332211   12346899999999984     34578899999999999999999999987665


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      .+....+.....+.                                              ...+..++.++.+||.+||+
T Consensus       214 ~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~li~~~l~  247 (282)
T cd06643         214 MRVLLKIAKSEPPT----------------------------------------------LAQPSRWSSEFKDFLKKCLE  247 (282)
T ss_pred             HHHHHHHhhcCCCC----------------------------------------------CCCccccCHHHHHHHHHHcc
Confidence            54433322111000                                              00112456689999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCCC
Q 013973          409 YDPTDRLTAREALRHPFFTRDHL  431 (433)
Q Consensus       409 ~dP~~R~ta~ell~hp~f~~~~~  431 (433)
                      .||.+||++.++++||||+....
T Consensus       248 ~~p~~Rp~~~~il~~~~~~~~~~  270 (282)
T cd06643         248 KNVDARWTTTQLLQHPFVTVNSN  270 (282)
T ss_pred             CChhhCcCHHHHhcCCCEeccCC
Confidence            99999999999999999986644

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2e-44  Score=347.21  Aligned_cols=251  Identities=25%  Similarity=0.383  Sum_probs=215.7

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      .|.-++.||.|+||.||-|++..+.+.||||.+....    ..-..+..|+..|+++     .|||.+...++|..+...
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l-----~HPntieYkgCyLre~Ta  101 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQL-----RHPNTIEYKGCYLREHTA  101 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhc-----cCCCcccccceeeccchH
Confidence            4777899999999999999999999999999996322    2234567899999999     779999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       174 ~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +||||||-|+-.|.|.-.. +++-+.++..|..+.+.||.|||+.+.||||||..|||+                     
T Consensus       102 WLVMEYClGSAsDlleVhk-KplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILL---------------------  159 (948)
T KOG0577|consen  102 WLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILL---------------------  159 (948)
T ss_pred             HHHHHHHhccHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEe---------------------
Confidence            9999999778778776543 479999999999999999999999999999999999999                     


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhC---CCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG---LGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                            .+.+.|||+|||.|....+ .++++|||.|||||+|..   +.|+-++||||||++..||...++|+-..+.+.
T Consensus       160 ------se~g~VKLaDFGSAsi~~P-AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMS  232 (948)
T KOG0577|consen  160 ------SEPGLVKLADFGSASIMAP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS  232 (948)
T ss_pred             ------cCCCeeeeccccchhhcCc-hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHH
Confidence                  4556789999998876654 456789999999999974   569999999999999999999999998888888


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      .+..|.+.-.|+-+                                               ...++..|+.||..||++-
T Consensus       233 ALYHIAQNesPtLq-----------------------------------------------s~eWS~~F~~Fvd~CLqKi  265 (948)
T KOG0577|consen  233 ALYHIAQNESPTLQ-----------------------------------------------SNEWSDYFRNFVDSCLQKI  265 (948)
T ss_pred             HHHHHHhcCCCCCC-----------------------------------------------CchhHHHHHHHHHHHHhhC
Confidence            88887765444221                                               1245668999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCC
Q 013973          411 PTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       411 P~~R~ta~ell~hp~f~~~  429 (433)
                      |.+|||++++|.|+|+...
T Consensus       266 pqeRptse~ll~H~fv~R~  284 (948)
T KOG0577|consen  266 PQERPTSEELLKHRFVLRE  284 (948)
T ss_pred             cccCCcHHHHhhcchhccC
Confidence            9999999999999999764

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=3.2e-42  Score=326.85  Aligned_cols=276  Identities=31%  Similarity=0.520  Sum_probs=214.6

Q ss_pred             EEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           99 YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      |++.+.||.|++|.||+|.++.+|..||+|++....   .....+..|+++++.+     .|++++++++.+...+..|+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l-----~~~~iv~~~~~~~~~~~~~i   75 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKEL-----NHPNIVRLLDVVHSENKLYL   75 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhc-----CCCCccCHhheeccCCeEEE
Confidence            577899999999999999999999999999986432   2234567799998888     57899999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          176 VFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       176 V~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      ||||++++|.+++.......+++..+..++.|++.||+|||+++++|+||+|+||+++.                     
T Consensus        76 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~---------------------  134 (283)
T cd07835          76 VFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDR---------------------  134 (283)
T ss_pred             EEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcC---------------------
Confidence            99999889999998765456899999999999999999999999999999999999954                     


Q ss_pred             cccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          256 FKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                            ++.++|+|||.+.......   ....++..|+|||++.+. .++.++|+||||+++|+|++|.+||...+....
T Consensus       135 ------~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~  208 (283)
T cd07835         135 ------EGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQ  208 (283)
T ss_pred             ------CCcEEEeecccccccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                  4456666666664332111   223568899999988764 478999999999999999999999998887777


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      +..+.+..+......+..+............  ++.                  .........++.++.++|.+||+.||
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------------------~~~~~~~~~~~~~~~~li~~~l~~~P  268 (283)
T cd07835         209 LFRIFRTLGTPDEDVWPGVTSLPDYKPTFPK--WAR------------------QDLSKVVPNLDEDGLDLLSKMLVYDP  268 (283)
T ss_pred             HHHHHHHhCCCChHHhhhhhhchhhhhhccc--ccc------------------cchhhhcCCCCHHHHHHHHHHhcCCh
Confidence            7667776666665554433222111100000  000                  00111234567889999999999999


Q ss_pred             CCCCCHHHHhcCCCC
Q 013973          412 TDRLTAREALRHPFF  426 (433)
Q Consensus       412 ~~R~ta~ell~hp~f  426 (433)
                      ++|||+.|++.||||
T Consensus       269 ~~Rpt~~~il~~~~~  283 (283)
T cd07835         269 AKRISAKAALQHPYF  283 (283)
T ss_pred             hhCcCHHHHhcCCCC
Confidence            999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=3.9e-43  Score=342.18  Aligned_cols=252  Identities=26%  Similarity=0.403  Sum_probs=215.0

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      .+.|.+.++||+|.|++|.+|++..++..||||++.+..   .......+|+++++.+     +||||++++.+.+....
T Consensus        55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l-----~HPnIvkl~~v~~t~~~  129 (596)
T KOG0586|consen   55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSL-----NHPNIVKLFSVIETEAT  129 (596)
T ss_pred             ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhc-----CCcceeeeeeeeeecce
Confidence            467999999999999999999999999999999997543   2334467899999999     88999999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +|+||||+ +|.+++||.+.+  ++.+..++.++.|+++|++|||+++|||||||.+|||+                   
T Consensus       130 lylV~eya~~ge~~~yl~~~g--r~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL-------------------  188 (596)
T KOG0586|consen  130 LYLVMEYASGGELFDYLVKHG--RMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILL-------------------  188 (596)
T ss_pred             eEEEEEeccCchhHHHHHhcc--cchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccc-------------------
Confidence            99999999 999999999876  77789999999999999999999999999999999999                   


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCC-CcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWT-YPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                              +.+.++||+|||++.......  .+.||++.|.|||++.+..|. +++|+||+|+++|.|+.|.+||++.+-
T Consensus       189 --------~~~mnikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l  260 (596)
T KOG0586|consen  189 --------DENMNIKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL  260 (596)
T ss_pred             --------ccccceeeeccccceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc
Confidence                    666778999999887666443  567999999999999998875 899999999999999999999987654


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      .+....                       ...|++..|                          -.++.++.++|+++|.
T Consensus       261 k~Lr~r-----------------------vl~gk~rIp--------------------------~~ms~dce~lLrk~lv  291 (596)
T KOG0586|consen  261 KELRPR-----------------------VLRGKYRIP--------------------------FYMSCDCEDLLRKFLV  291 (596)
T ss_pred             ccccch-----------------------heeeeeccc--------------------------ceeechhHHHHHHhhc
Confidence            321110                       112222211                          2456789999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCC
Q 013973          409 YDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       409 ~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      +||.+|++.+++..|.|....+
T Consensus       292 l~Pskr~~~dqim~~~W~n~~~  313 (596)
T KOG0586|consen  292 LNPSKRGPCDQIMKDRWRNDLL  313 (596)
T ss_pred             cCccccCCHHHhhhhcccchhh
Confidence            9999999999999999987543

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3.2e-42  Score=336.22  Aligned_cols=280  Identities=28%  Similarity=0.501  Sum_probs=217.9

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC--
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR--  170 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~--  170 (433)
                      .++|.+.+.||+|+||.||+|++..+++.||+|++...   ......+..|+.+++.+     .|+||+++++++...  
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~~~~~~~~~~~   88 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHM-----QHENVIGLLDVFTSAVS   88 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhc-----CCCCccchhheeccccc
Confidence            46799999999999999999999999999999998642   22234466788888887     668899999988654  


Q ss_pred             ----CeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCC
Q 013973          171 ----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  246 (433)
Q Consensus       171 ----~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~  246 (433)
                          ..+|+||||+..+|..++.    ..+++..+..++.|++.||.|||+.||+||||||+|||++             
T Consensus        89 ~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~-------------  151 (342)
T cd07879          89 GDEFQDFYLVMPYMQTDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVN-------------  151 (342)
T ss_pred             CCCCceEEEEecccccCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC-------------
Confidence                3579999999778877652    2689999999999999999999999999999999999994             


Q ss_pred             CCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 013973          247 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQT  325 (433)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~~  325 (433)
                                    .++.++|+|||++...........||..|+|||++.+ ..++.++|||||||++|||++|+.||.+
T Consensus       152 --------------~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~  217 (342)
T cd07879         152 --------------EDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKG  217 (342)
T ss_pred             --------------CCCCEEEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCC
Confidence                          4556788888877654444444578999999999876 4688999999999999999999999998


Q ss_pred             CChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHh
Q 013973          326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  405 (433)
Q Consensus       326 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  405 (433)
                      .+....+..+....+..++.+.+.................+                  ........+..+.++.+||.+
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~li~~  279 (342)
T cd07879         218 KDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYP------------------RKDFSTLFPKASPQAVDLLEK  279 (342)
T ss_pred             CCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcc------------------cchHHHHhcCCCHHHHHHHHH
Confidence            88777788888888777776655543322111100000000                  000111123457789999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCC
Q 013973          406 LLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       406 ~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      ||+.||++||++.|++.||||...
T Consensus       280 ~l~~dP~~R~~~~e~l~h~~f~~~  303 (342)
T cd07879         280 MLELDVDKRLTATEALEHPYFDSF  303 (342)
T ss_pred             HcCCChhhCcCHHHHhcCcchhhc
Confidence            999999999999999999999754

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=5.1e-42  Score=335.16  Aligned_cols=282  Identities=27%  Similarity=0.485  Sum_probs=218.8

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|++....   ...+....|+.+++++     +|+||+++.+.+...
T Consensus        14 ~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l-----~h~~iv~~~~~~~~~   88 (345)
T cd07877          14 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-----KHENVIGLLDVFTPA   88 (345)
T ss_pred             hccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHc-----CCCcccceeeeeeec
Confidence            45688999999999999999999999999999999986422   2234566788888888     678899998887532


Q ss_pred             ------CeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCc
Q 013973          171 ------NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  244 (433)
Q Consensus       171 ------~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg  244 (433)
                            ...|+++++++++|.+++...   .+++..+..++.||+.||.|||++||+||||||+||++++          
T Consensus        89 ~~~~~~~~~~lv~~~~~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~----------  155 (345)
T cd07877          89 RSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE----------  155 (345)
T ss_pred             ccccccccEEEEehhcccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcC----------
Confidence                  457899999999999888653   5999999999999999999999999999999999999954          


Q ss_pred             CCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCC
Q 013973          245 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF  323 (433)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf  323 (433)
                                       ++.++|+|||++...........||..|+|||++.+ ..++.++|||||||++|+|++|..||
T Consensus       156 -----------------~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf  218 (345)
T cd07877         156 -----------------DCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF  218 (345)
T ss_pred             -----------------CCCEEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCC
Confidence                             445677777766554433344578999999999876 46889999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhh-hhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAE-KYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      ...+....+..+....+..+..+...+..... .++..- ...+.                  ..........++++.+|
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------------------~~~~~~~~~~~~~~~~l  279 (345)
T cd07877         219 PGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL-TQMPK------------------MNFANVFIGANPLAVDL  279 (345)
T ss_pred             CCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHh-cccCC------------------cchhhhcCCCCHHHHHH
Confidence            88877777778888777777766654432211 111000 00000                  00011112457789999


Q ss_pred             HHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          403 LQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       403 i~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      |.+||+.||.+|+++.++++||||++-
T Consensus       280 i~~~L~~dp~~R~t~~e~l~h~~f~~~  306 (345)
T cd07877         280 LEKMLVLDSDKRITAAQALAHAYFAQY  306 (345)
T ss_pred             HHHHcCCChhhcCCHHHHhcChhhhhc
Confidence            999999999999999999999999864

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.3e-43  Score=330.14  Aligned_cols=255  Identities=28%  Similarity=0.480  Sum_probs=203.2

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      ++|++++.||.|+||.||+|.+..+++.||+|++... ....+.+..|+++++.+     .|++++++++.+.....+|+
T Consensus         5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~l   79 (280)
T cd06611           5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSEC-----KHPNIVGLYEAYFYENKLWI   79 (280)
T ss_pred             hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhC-----CCCceeEEEEEEecCCeEEE
Confidence            5699999999999999999999989999999998643 23345677889988888     57899999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      ||||+ +++|.+++...+ ..+++..++.++.|++.||.|||++||+|+||||+||+++.++                  
T Consensus        80 v~e~~~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~------------------  140 (280)
T cd06611          80 LIEFCDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDG------------------  140 (280)
T ss_pred             EeeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCC------------------
Confidence            99999 889999987653 4699999999999999999999999999999999999995544                  


Q ss_pred             ccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhC-----CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILG-----LGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                               .++|+|||.+......   .....||+.|+|||++..     ..++.++|+||||+++|+|++|.+||...
T Consensus       141 ---------~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~  211 (280)
T cd06611         141 ---------DVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHEL  211 (280)
T ss_pred             ---------CEEEccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccC
Confidence                     5566666654432211   123468999999999853     44778999999999999999999999876


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      +..+....+..  +..+                       .                     ...+..++.++.+||.+|
T Consensus       212 ~~~~~~~~~~~--~~~~-----------------------~---------------------~~~~~~~~~~~~~li~~~  245 (280)
T cd06611         212 NPMRVLLKILK--SEPP-----------------------T---------------------LDQPSKWSSSFNDFLKSC  245 (280)
T ss_pred             CHHHHHHHHhc--CCCC-----------------------C---------------------cCCcccCCHHHHHHHHHH
Confidence            54433322111  0000                       0                     001224567899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      |+.||.+||++.++++||||.+..
T Consensus       246 l~~~p~~Rps~~~il~~~~~~~~~  269 (280)
T cd06611         246 LVKDPDDRPTAAELLKHPFVSDQS  269 (280)
T ss_pred             hccChhhCcCHHHHhcChhhcccc
Confidence            999999999999999999998753

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=3.7e-42  Score=328.28  Aligned_cols=279  Identities=28%  Similarity=0.487  Sum_probs=215.1

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh---hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC--C
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK---YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR--N  171 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~--~  171 (433)
                      ++|++.+.||+|+||.||+|.++.+++.+|+|.++....   .......|+.++.++     .|+|++++++++...  +
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~ni~~~~~~~~~~~~~   79 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKL-----QHPNIVTVKEVVVGSNLD   79 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhc-----CCCCEEEEEEEEEecCCC
Confidence            469999999999999999999999999999999874322   223445788888888     578999999988776  8


Q ss_pred             eEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          172 HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       172 ~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      .+|+||||++++|.+++.... ..+++..++.++.||+.||+|||+.||+|+||||+|||++.+                
T Consensus        80 ~~~lv~e~~~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~----------------  142 (293)
T cd07843          80 KIYMVMEYVEHDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNR----------------  142 (293)
T ss_pred             cEEEEehhcCcCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCC----------------
Confidence            999999999889999987654 369999999999999999999999999999999999999544                


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCC-CCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                                 +.++|+|||.+......   .....++..|+|||.+.+.. ++.++|+||||+++|+|++|..||...+
T Consensus       143 -----------~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~  211 (293)
T cd07843         143 -----------GILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKS  211 (293)
T ss_pred             -----------CcEEEeecCceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                       45666666665533222   12235788999999987654 6899999999999999999999999988


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCC-chhHHHHHHHhc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH-SAGDLTHLLQGL  406 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~  406 (433)
                      ..+....+...++.++...+.........  ..  ..+...              ........++.. .+..+.+||++|
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~--------------~~~~~~~~~~~~~~~~~~~~li~~~  273 (293)
T cd07843         212 EIDQLNKIFKLLGTPTEKIWPGFSELPGA--KK--KTFTKY--------------PYNQLRKKFPALSLSDNGFDLLNRL  273 (293)
T ss_pred             hHHHHHHHHHHhCCCchHHHHHhhccchh--cc--cccccc--------------cchhhhccccccCCChHHHHHHHHH
Confidence            88888888887777666555443221110  00  000000              000111112222 577899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFF  426 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f  426 (433)
                      |+.||++|||+.|+|.||||
T Consensus       274 l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         274 LTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             hccCccccCCHHHHhcCCCC
Confidence            99999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.9e-42  Score=327.06  Aligned_cols=252  Identities=26%  Similarity=0.419  Sum_probs=204.7

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ++|++.+.||.|+||.||+|.+..+++.||+|++....  .....+..|+.+++.+     .|++++.+.+.+.....+|
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~   75 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQC-----RSPYITKYYGSFLKGSKLW   75 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHc-----CCCCeeeeeEEEEECCeEE
Confidence            36889999999999999999999999999999986432  2334567788888888     5788999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +|+||+ +++|.+++...   .+++..+..++.|++.||.|||+++|+|+||+|+||++++                   
T Consensus        76 ~v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~-------------------  133 (274)
T cd06609          76 IIMEYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSE-------------------  133 (274)
T ss_pred             EEEEeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC-------------------
Confidence            999999 88999998764   6999999999999999999999999999999999999954                   


Q ss_pred             cccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                              ++.++|+|||.+......   .....|+..|+|||++.+..++.++|||||||++|+|++|..||...+...
T Consensus       134 --------~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~  205 (274)
T cd06609         134 --------EGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR  205 (274)
T ss_pred             --------CCCEEEcccccceeecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH
Confidence                    445666666666543322   233468899999999999889999999999999999999999997655433


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCC-chhHHHHHHHhcccc
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH-SAGDLTHLLQGLLRY  409 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~  409 (433)
                      ....+.....+                                                ..... ++.++.+++.+||..
T Consensus       206 ~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~~~l~~~l~~  237 (274)
T cd06609         206 VLFLIPKNNPP------------------------------------------------SLEGNKFSKPFKDFVSLCLNK  237 (274)
T ss_pred             HHHHhhhcCCC------------------------------------------------CCcccccCHHHHHHHHHHhhC
Confidence            32221111000                                                00011 566899999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCCC
Q 013973          410 DPTDRLTAREALRHPFFTRDHL  431 (433)
Q Consensus       410 dP~~R~ta~ell~hp~f~~~~~  431 (433)
                      ||++|||++++++||||++...
T Consensus       238 ~p~~Rpt~~~il~~~~~~~~~~  259 (274)
T cd06609         238 DPKERPSAKELLKHKFIKKAKK  259 (274)
T ss_pred             ChhhCcCHHHHhhChhhcCCCc
Confidence            9999999999999999987653

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.4e-42  Score=329.99  Aligned_cols=255  Identities=21%  Similarity=0.357  Sum_probs=202.9

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      +|++++.||+|+||.||+|.+..+++.||+|.++..  ......+..|+.+++++     .|+|++++++.+...+.+|+
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~~~~~l   76 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKA-----VSPYIVDFYGAFFIEGAVYM   76 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhc-----CCCcHHhhhhheecCCeEEE
Confidence            589999999999999999999999999999988642  23345677888888887     66889999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          176 VFEKL-GSSLYDFLRKNN-YRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~-~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      ||||+ +++|.+++.... ...+++..+..++.||+.||.|||+ .||+|+||||+||+++.                  
T Consensus        77 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~------------------  138 (286)
T cd06622          77 CMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNG------------------  138 (286)
T ss_pred             EEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECC------------------
Confidence            99999 889998887631 2368999999999999999999997 59999999999999954                  


Q ss_pred             CcccccCCCCCCEEEEecCCccccCC-CCCceeecCcccchhhhhCC------CCCCcchhHHHHHHHHHHHhCCCCCCC
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERP-DQNYIVSTRHYRAPEVILGL------GWTYPCDIWSVGCILVELCTGEALFQT  325 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGv~l~elltg~~Pf~~  325 (433)
                               ++.++|+|||.+..... ......|+..|+|||++.+.      .++.++|+|||||++|+|++|..||..
T Consensus       139 ---------~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~  209 (286)
T cd06622         139 ---------NGQVKLCDFGVSGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPP  209 (286)
T ss_pred             ---------CCCEEEeecCCcccccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCC
Confidence                     45677777777654322 22334688899999998654      358899999999999999999999976


Q ss_pred             CChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHh
Q 013973          326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  405 (433)
Q Consensus       326 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  405 (433)
                      .........+.......+                                             ...+..++.++.+||.+
T Consensus       210 ~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~~li~~  244 (286)
T cd06622         210 ETYANIFAQLSAIVDGDP---------------------------------------------PTLPSGYSDDAQDFVAK  244 (286)
T ss_pred             cchhhHHHHHHHHhhcCC---------------------------------------------CCCCcccCHHHHHHHHH
Confidence            544333332222111100                                             01123467789999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCC
Q 013973          406 LLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       406 ~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      ||+.||++||++.+++.||||...
T Consensus       245 ~l~~~p~~Rp~~~~l~~~~~~~~~  268 (286)
T cd06622         245 CLNKIPNRRPTYAQLLEHPWLVKY  268 (286)
T ss_pred             HcccCcccCCCHHHHhcChhhhhc
Confidence            999999999999999999999754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=1.8e-42  Score=331.36  Aligned_cols=253  Identities=28%  Similarity=0.457  Sum_probs=202.0

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ..+|.+++.||+|+||.||+|.+..+++.||+|.+.... ...+.+..|+.+++.+     +|++++++++.+...+..|
T Consensus        18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~~~~~~~~~~~~~~   92 (297)
T cd06656          18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMREN-----KNPNIVNYLDSYLVGDELW   92 (297)
T ss_pred             hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhC-----CCCCEeeEEEEEecCCEEE
Confidence            367999999999999999999999999999999986432 2345566788888777     6789999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +||||+ +++|.+++...   .+++..+..++.|++.||.|||+.||+||||||+|||++.++                 
T Consensus        93 lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~-----------------  152 (297)
T cd06656          93 VVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDG-----------------  152 (297)
T ss_pred             EeecccCCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC-----------------
Confidence            999999 99999998753   589999999999999999999999999999999999995544                 


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                                .++|+|||.+.......   ....|++.|+|||.+.+..++.++|+|||||++|+|++|..||...+...
T Consensus       153 ----------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~  222 (297)
T cd06656         153 ----------SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR  222 (297)
T ss_pred             ----------CEEECcCccceEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcch
Confidence                      45666666554332221   23468899999999999889999999999999999999999997654432


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+..                      .+.   +.                     ...+...+..+.+|+.+||+.|
T Consensus       223 ~~~~~~~----------------------~~~---~~---------------------~~~~~~~~~~~~~li~~~l~~~  256 (297)
T cd06656         223 ALYLIAT----------------------NGT---PE---------------------LQNPERLSAVFRDFLNRCLEMD  256 (297)
T ss_pred             heeeecc----------------------CCC---CC---------------------CCCccccCHHHHHHHHHHccCC
Confidence            2111000                      000   00                     0012245667899999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCC
Q 013973          411 PTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       411 P~~R~ta~ell~hp~f~~~  429 (433)
                      |++||++.++++||||...
T Consensus       257 p~~Rps~~~il~~~~~~~~  275 (297)
T cd06656         257 VDRRGSAKELLQHPFLKLA  275 (297)
T ss_pred             hhhCcCHHHHhcCchhccc
Confidence            9999999999999999754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=3.1e-42  Score=326.75  Aligned_cols=250  Identities=26%  Similarity=0.426  Sum_probs=189.8

Q ss_pred             eeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEec
Q 013973          104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEK  179 (433)
Q Consensus       104 ~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~  179 (433)
                      .||+|+||.||+|.+..+++.||+|.+....    ........|..++..+..  .+|++++.+++.+...+..++||||
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~lv~e~   78 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST--GDCPFIVCMTYAFHTPDKLCFILDL   78 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhh--CCCCcEeEEEEEEecCCeEEEEEec
Confidence            4899999999999999999999999886432    112223344444443322  2568899999999999999999999


Q ss_pred             C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCccccc
Q 013973          180 L-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKR  258 (433)
Q Consensus       180 ~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~  258 (433)
                      + +++|.+++...+  .+++..+..++.|++.||.|||+.||+||||||+|||++++                       
T Consensus        79 ~~~~~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~-----------------------  133 (279)
T cd05633          79 MNGGDLHYHLSQHG--VFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEH-----------------------  133 (279)
T ss_pred             CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCC-----------------------
Confidence            9 899999987654  69999999999999999999999999999999999999544                       


Q ss_pred             CCCCCCEEEEecCCccccCCC-CCceeecCcccchhhhh-CCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 013973          259 MPKSSAIKVIDFGSTTYERPD-QNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME  336 (433)
Q Consensus       259 ~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~i~  336 (433)
                          +.++|+|||++...... .....||..|+|||.+. +..++.++|+|||||++|+|++|..||.......... +.
T Consensus       134 ----~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~-~~  208 (279)
T cd05633         134 ----GHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-ID  208 (279)
T ss_pred             ----CCEEEccCCcceeccccCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH-HH
Confidence                45666666655432221 12246899999999987 4568999999999999999999999997543211110 00


Q ss_pred             HHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCC-
Q 013973          337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL-  415 (433)
Q Consensus       337 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-  415 (433)
                      .....                       .                      ....++.++.++.++|.+||+.||++|+ 
T Consensus       209 ~~~~~-----------------------~----------------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~  243 (279)
T cd05633         209 RMTLT-----------------------V----------------------NVELPDSFSPELKSLLEGLLQRDVSKRLG  243 (279)
T ss_pred             HHhhc-----------------------C----------------------CcCCccccCHHHHHHHHHHhcCCHHHhcC
Confidence            00000                       0                      0011235677899999999999999999 


Q ss_pred             ----CHHHHhcCCCCCCCC
Q 013973          416 ----TAREALRHPFFTRDH  430 (433)
Q Consensus       416 ----ta~ell~hp~f~~~~  430 (433)
                          |+.|+++||||+...
T Consensus       244 ~~~~~~~~~~~h~~~~~~~  262 (279)
T cd05633         244 CLGRGAQEVKEHVFFKGID  262 (279)
T ss_pred             CCCCCHHHHHhCccccCCC
Confidence                699999999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=5.5e-42  Score=320.33  Aligned_cols=249  Identities=27%  Similarity=0.449  Sum_probs=204.3

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      +|++.+.||+|+||.||++.+..+++.||+|.+...   ......+..|+.+++.+     .|++++++.+.+...++.+
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   75 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNM-----KHPNIVQYQESFEENGNLY   75 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhC-----CCCCeeeeEeeecCCCeEE
Confidence            489999999999999999999999999999998632   23345677888888888     6688999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +||||+ +++|.+++.......+++..+..++.|++.||.|||++|++|+||+|+|||++.                   
T Consensus        76 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~-------------------  136 (256)
T cd08218          76 IVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTK-------------------  136 (256)
T ss_pred             EEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC-------------------
Confidence            999999 889999998755456899999999999999999999999999999999999954                   


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                              +..++|+|||.+.......   ....|++.|+|||++.+..++.++|+|||||++|+|++|..||...+..+
T Consensus       137 --------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~  208 (256)
T cd08218         137 --------DGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKN  208 (256)
T ss_pred             --------CCCEEEeeccceeecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHH
Confidence                    4456777777665432221   22458889999999998889999999999999999999999998765544


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+..  +..+                                              ..+..++.++.++|.+||+.+
T Consensus       209 ~~~~~~~--~~~~----------------------------------------------~~~~~~~~~~~~li~~~l~~~  240 (256)
T cd08218         209 LVLKIIR--GSYP----------------------------------------------PVSSHYSYDLRNLVSQLFKRN  240 (256)
T ss_pred             HHHHHhc--CCCC----------------------------------------------CCcccCCHHHHHHHHHHhhCC
Confidence            4332211  1000                                              012345678999999999999


Q ss_pred             CCCCCCHHHHhcCCCC
Q 013973          411 PTDRLTAREALRHPFF  426 (433)
Q Consensus       411 P~~R~ta~ell~hp~f  426 (433)
                      |++||++.++++||||
T Consensus       241 p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         241 PRDRPSVNSILEKNFI  256 (256)
T ss_pred             hhhCcCHHHHhhCcCC
Confidence            9999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=4.2e-42  Score=328.65  Aligned_cols=252  Identities=29%  Similarity=0.453  Sum_probs=204.1

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      .+|++.+.||.|+||.||+|.+..+++.||+|.+.... ...+.+..|+.+++.+     .|++++.+++.+.....+|+
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~~l   93 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKEL-----KNPNIVNFLDSFLVGDELFV   93 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhc-----CCCceeeeeeeEecCceEEE
Confidence            56999999999999999999999999999999886322 2345567788888887     67889999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      ||||+ +++|.+++...   .+++..+..++.|++.||+|||+.||+|+||||+||+++.++                  
T Consensus        94 v~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~------------------  152 (296)
T cd06655          94 VMEYLAGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDG------------------  152 (296)
T ss_pred             EEEecCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC------------------
Confidence            99999 89999988753   589999999999999999999999999999999999995444                  


Q ss_pred             ccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                               .++|+|||++.......   ....|+..|+|||.+.+..++.++|+|||||++|+|++|..||...+....
T Consensus       153 ---------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~  223 (296)
T cd06655         153 ---------SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA  223 (296)
T ss_pred             ---------CEEEccCccchhcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                     56666666554332221   234688999999999988899999999999999999999999987665443


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      ...+...  ..+                  .                          ...+..++..+.+||.+||+.||
T Consensus       224 ~~~~~~~--~~~------------------~--------------------------~~~~~~~~~~~~~li~~~l~~dp  257 (296)
T cd06655         224 LYLIATN--GTP------------------E--------------------------LQNPEKLSPIFRDFLNRCLEMDV  257 (296)
T ss_pred             HHHHHhc--CCc------------------c--------------------------cCCcccCCHHHHHHHHHHhhcCh
Confidence            3222110  000                  0                          00123456789999999999999


Q ss_pred             CCCCCHHHHhcCCCCCCC
Q 013973          412 TDRLTAREALRHPFFTRD  429 (433)
Q Consensus       412 ~~R~ta~ell~hp~f~~~  429 (433)
                      ++||++.+++.||||...
T Consensus       258 ~~Rpt~~~il~~~~~~~~  275 (296)
T cd06655         258 EKRGSAKELLQHPFLKLA  275 (296)
T ss_pred             hhCCCHHHHhhChHhhhc
Confidence            999999999999999753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=4e-42  Score=323.05  Aligned_cols=257  Identities=25%  Similarity=0.392  Sum_probs=198.0

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-------hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      +|++.+.||+|+||.||+|.+ .+++.+|+|.++...       .....+..|+++++.+     .|+|++++.+++.+.
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~   74 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL-----KHVNIVQYLGTCLDD   74 (265)
T ss_pred             CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhc-----CCCCEeeEeeEeecC
Confidence            378889999999999999987 467889999886321       2234466788888887     568899999999999


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      +.+++||||+ +++|.+++....  .+++..+..++.|++.||+|||+.||+|+||||+||++++++.++|+|||++...
T Consensus        75 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  152 (265)
T cd06631          75 NTISIFMEFVPGGSISSILNRFG--PLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRL  152 (265)
T ss_pred             CeEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhh
Confidence            9999999999 899999997654  6899999999999999999999999999999999999976666555555544322


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChH
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  329 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~  329 (433)
                      ......                  ...........|+..|+|||++.+..++.++|+|||||++|+|++|..||...+..
T Consensus       153 ~~~~~~------------------~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~  214 (265)
T cd06631         153 AWVGLH------------------GTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL  214 (265)
T ss_pred             hhcccc------------------ccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChH
Confidence            110000                  00000112236899999999999988999999999999999999999999765443


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      .....+....+..+                                              ..+..++.++.+||++||+.
T Consensus       215 ~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~i~~~l~~  248 (265)
T cd06631         215 AAMFYIGAHRGLMP----------------------------------------------RLPDSFSAAAIDFVTSCLTR  248 (265)
T ss_pred             HHHHHhhhccCCCC----------------------------------------------CCCCCCCHHHHHHHHHHhcC
Confidence            32222111111100                                              11235677899999999999


Q ss_pred             CCCCCCCHHHHhcCCCC
Q 013973          410 DPTDRLTAREALRHPFF  426 (433)
Q Consensus       410 dP~~R~ta~ell~hp~f  426 (433)
                      ||++||++.|+++||||
T Consensus       249 ~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         249 DQHERPSALQLLRHDFL  265 (265)
T ss_pred             CcccCCCHHHHhcCCCC
Confidence            99999999999999998

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.4e-43  Score=343.61  Aligned_cols=280  Identities=25%  Similarity=0.403  Sum_probs=214.8

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhH----HHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR----EAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~----~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      -|..++.||-|+||.|.+++..+|...||+|.+++.+-..    .-...|..||...     .++.||++|..|++.+.+
T Consensus       630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEA-----Dn~WVVrLyySFQDkdnL  704 (1034)
T KOG0608|consen  630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEA-----DNEWVVRLYYSFQDKDNL  704 (1034)
T ss_pred             ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhc-----CCcceEEEEEEeccCCce
Confidence            4889999999999999999999999999999997543222    2234577777766     678899999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC--CCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL--HTP  250 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~--~~~  250 (433)
                      |+||+|+ ||++-.+|-+.+  .|+++.+++|+.++.+|+++.|.+|+|||||||+||||+.+|++||.|||++.  +|.
T Consensus       705 YFVMdYIPGGDmMSLLIrmg--IFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT  782 (1034)
T KOG0608|consen  705 YFVMDYIPGGDMMSLLIRMG--IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT  782 (1034)
T ss_pred             EEEEeccCCccHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceec
Confidence            9999999 999999988876  89999999999999999999999999999999999999999999999999875  334


Q ss_pred             CCCcccccC---------------CCCCCEEEEecCCcccc-CCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHH
Q 013973          251 KDSSYFKRM---------------PKSSAIKVIDFGSTTYE-RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILV  314 (433)
Q Consensus       251 ~~~~~~~~~---------------~~~~~~kl~Dfg~a~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~  314 (433)
                      .+..++...               +....+|+..+--.+.. .-.....+||+.|+|||++....|+..+||||.|||||
T Consensus       783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~  862 (1034)
T KOG0608|consen  783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY  862 (1034)
T ss_pred             cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence            444443210               01111222111110100 00113468999999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCC
Q 013973          315 ELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH  394 (433)
Q Consensus       315 elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (433)
                      ||+.|++||...+..+....+..                           |       ++..           ....-..
T Consensus       863 em~~g~~pf~~~tp~~tq~kv~n---------------------------w-------~~~l-----------~~~~~~~  897 (1034)
T KOG0608|consen  863 EMLVGQPPFLADTPGETQYKVIN---------------------------W-------RNFL-----------HIPYQGN  897 (1034)
T ss_pred             HHhhCCCCccCCCCCcceeeeee---------------------------h-------hhcc-----------ccccccc
Confidence            99999999988766543322111                           0       0000           0111236


Q ss_pred             chhHHHHHHHhccccCCCCCCC---HHHHhcCCCCCCCC
Q 013973          395 SAGDLTHLLQGLLRYDPTDRLT---AREALRHPFFTRDH  430 (433)
Q Consensus       395 ~~~~~~~li~~~L~~dP~~R~t---a~ell~hp~f~~~~  430 (433)
                      ++.++.+||.+ |..+++.|+.   ++||..||||+..+
T Consensus       898 ls~e~~~li~k-Lc~sad~RLGkng~d~vKaHpfFkgID  935 (1034)
T KOG0608|consen  898 LSKEALDLIQK-LCCSADSRLGKNGADQVKAHPFFKGID  935 (1034)
T ss_pred             cCHHHHHHHHH-HhcChhhhhcccchhhhhcCccccccc
Confidence            78899999988 5568899994   88999999998754

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=3.3e-42  Score=328.53  Aligned_cols=254  Identities=26%  Similarity=0.473  Sum_probs=200.8

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      +.|+++++||.|+||.||+|.+..+++.||+|++.... .....+..|+.+++.+     .|++++++++.+...+.+|+
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~l   86 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATC-----NHPYIVKLLGAFYWDGKLWI   86 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhC-----CCCcEeeeEEEEEeCCeEEE
Confidence            56999999999999999999999999999999986432 3345567788888877     67899999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      ||||+ +++|..++.+.. ..+++..+..++.|++.||.|||+.||+||||||+||+++.++                  
T Consensus        87 v~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~------------------  147 (292)
T cd06644          87 MIEFCPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDG------------------  147 (292)
T ss_pred             EEecCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCC------------------
Confidence            99999 888888876543 4689999999999999999999999999999999999995444                  


Q ss_pred             ccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhh-----CCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                               .++|+|||.+......   .....|+..|+|||++.     ...++.++|+|||||++|+|++|..||...
T Consensus       148 ---------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~  218 (292)
T cd06644         148 ---------DIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL  218 (292)
T ss_pred             ---------CEEEccCccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccc
Confidence                     5666666655432111   12346889999999985     344788999999999999999999999776


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      +..+....+..   ..+                      +.                     ...+..++.++.+||.+|
T Consensus       219 ~~~~~~~~~~~---~~~----------------------~~---------------------~~~~~~~~~~~~~li~~~  252 (292)
T cd06644         219 NPMRVLLKIAK---SEP----------------------PT---------------------LSQPSKWSMEFRDFLKTA  252 (292)
T ss_pred             cHHHHHHHHhc---CCC----------------------cc---------------------CCCCcccCHHHHHHHHHH
Confidence            54433322211   000                      00                     001224566899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      |+.||++||++.|+++||||..-
T Consensus       253 l~~~p~~Rp~~~~il~~~~~~~~  275 (292)
T cd06644         253 LDKHPETRPSAAQLLEHPFVSSV  275 (292)
T ss_pred             hcCCcccCcCHHHHhcCcccccc
Confidence            99999999999999999999853

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=7.4e-42  Score=328.32  Aligned_cols=269  Identities=25%  Similarity=0.419  Sum_probs=204.8

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      +|++++.||+|+||.||+|.+..+++.||+|.+....    .....+..|+.+++.+     .|+||+++++.+..++++
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~~~~   76 (305)
T cd05609           2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFA-----ENPFVVSMFCSFETKRHL   76 (305)
T ss_pred             CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhC-----CCCCeeeeEEEEecCCEE
Confidence            5999999999999999999999999999999987432    2234556788887776     668999999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      ++||||+ |++|.+++...+  .+++..+..++.|++.||.|||+.||+||||||+||+++.++.++++|||++......
T Consensus        77 ~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~  154 (305)
T cd05609          77 CMVMEYVEGGDCATLLKNIG--ALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMS  154 (305)
T ss_pred             EEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcC
Confidence            9999999 889999997754  7999999999999999999999999999999999999977777777777655422110


Q ss_pred             CcccccCCCCCCEEEEecCCcccc-CCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYE-RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                      ..          ..+.+....... ........|+..|+|||.+.+..++.++|+|||||++|||++|..||.+.+..+.
T Consensus       155 ~~----------~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~  224 (305)
T cd05609         155 LT----------TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL  224 (305)
T ss_pred             cc----------ccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            00          000000000000 0001123578899999999988899999999999999999999999987655443


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      ...+...                       ...++.                       ....++.++.+||.+||+.||
T Consensus       225 ~~~~~~~-----------------------~~~~~~-----------------------~~~~~~~~~~~li~~~l~~~P  258 (305)
T cd05609         225 FGQVISD-----------------------DIEWPE-----------------------GDEALPADAQDLISRLLRQNP  258 (305)
T ss_pred             HHHHHhc-----------------------ccCCCC-----------------------ccccCCHHHHHHHHHHhccCh
Confidence            3322111                       111111                       012456789999999999999


Q ss_pred             CCCCC---HHHHhcCCCCCCC
Q 013973          412 TDRLT---AREALRHPFFTRD  429 (433)
Q Consensus       412 ~~R~t---a~ell~hp~f~~~  429 (433)
                      ++||+   +.++|+||||...
T Consensus       259 ~~R~~~~~~~~ll~~~~~~~~  279 (305)
T cd05609         259 LERLGTGGAFEVKQHRFFLGL  279 (305)
T ss_pred             hhccCccCHHHHHhCccccCC
Confidence            99997   8999999999654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=8.7e-42  Score=325.42  Aligned_cols=256  Identities=25%  Similarity=0.422  Sum_probs=199.8

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC----
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR----  170 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~----  170 (433)
                      ..++|.+.+.||+|+||.||+|.+..+++.+|+|++............|+.+++++.    .|+|++++++.+...    
T Consensus        20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~----~h~ni~~~~~~~~~~~~~~   95 (291)
T cd06639          20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLP----NHPNVVKFYGMFYKADKLV   95 (291)
T ss_pred             CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhc----CCCCeEEEEEEEEeccccC
Confidence            457899999999999999999999999999999998754444556677888887773    467899999987643    


Q ss_pred             -CeEEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCC
Q 013973          171 -NHICIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  246 (433)
Q Consensus       171 -~~~~lV~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~  246 (433)
                       +.+++||||+ +++|.+++...  ....+++..++.++.|++.||+|||+.||+|+||||+||+++.            
T Consensus        96 ~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~------------  163 (291)
T cd06639          96 GGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTT------------  163 (291)
T ss_pred             CCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC------------
Confidence             4689999999 88999988642  2246899999999999999999999999999999999999954            


Q ss_pred             CCCCCCCcccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCC-----CCCCcchhHHHHHHHHHHHh
Q 013973          247 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGL-----GWTYPCDIWSVGCILVELCT  318 (433)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwSlGv~l~ellt  318 (433)
                                     ++.+||+|||.+......   .....|+..|+|||++...     .++.++|+|||||++|||++
T Consensus       164 ---------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~  228 (291)
T cd06639         164 ---------------EGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGD  228 (291)
T ss_pred             ---------------CCCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhh
Confidence                           445677777766543321   1234688999999998653     36899999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhH
Q 013973          319 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  398 (433)
Q Consensus       319 g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (433)
                      |++||...+..+.+..+...  ..+                    ..                        ..+...+..
T Consensus       229 g~~p~~~~~~~~~~~~~~~~--~~~--------------------~~------------------------~~~~~~~~~  262 (291)
T cd06639         229 GDPPLFDMHPVKTLFKIPRN--PPP--------------------TL------------------------LHPEKWCRS  262 (291)
T ss_pred             CCCCCCCCcHHHHHHHHhcC--CCC--------------------CC------------------------CcccccCHH
Confidence            99999865543333221110  000                    00                        001234457


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhcCCCCC
Q 013973          399 LTHLLQGLLRYDPTDRLTAREALRHPFFT  427 (433)
Q Consensus       399 ~~~li~~~L~~dP~~R~ta~ell~hp~f~  427 (433)
                      +.+||.+||+.||++||++.|+++||||+
T Consensus       263 l~~li~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         263 FNHFISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             HHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence            89999999999999999999999999995

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=4.7e-42  Score=326.11  Aligned_cols=278  Identities=31%  Similarity=0.523  Sum_probs=210.9

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++....   ...+.+..|+++++.+     .|++++++++++...+..
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~   75 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQL-----RHENLVNLIEVFRRKKRL   75 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhc-----CCcchhhHHHhcccCCeE
Confidence            36999999999999999999999999999999875322   2334566788888887     678999999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      |+||||+ ++.|.++.....  .+++..+..++.||+.||.|||+.||+|+||+|+||++++                  
T Consensus        76 ~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~------------------  135 (286)
T cd07846          76 YLVFEFVDHTVLDDLEKYPN--GLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQ------------------  135 (286)
T ss_pred             EEEEecCCccHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC------------------
Confidence            9999999 667766655433  5899999999999999999999999999999999999954                  


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                               ++.++|+|||++.......   ....|+..|+|||++.+. .++.++||||||+++|||++|.+||...+.
T Consensus       136 ---------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~  206 (286)
T cd07846         136 ---------SGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD  206 (286)
T ss_pred             ---------CCcEEEEeeeeeeeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch
Confidence                     4567777777665432221   224678899999998763 478899999999999999999999988877


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      .+....+....+.+.+..........   +..+ ...+... .             ..........++..+.+|+.+||+
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~-~-------------~~~~~~~~~~~~~~~~~li~~~l~  268 (286)
T cd07846         207 IDQLYHIIKCLGNLIPRHQEIFQKNP---LFAG-MRLPEVK-E-------------IEPLEKRFPKLSGLVLDLAKQCLR  268 (286)
T ss_pred             HHHHHHHHHHhCCCchhhHHHhccch---Hhhc-ccccccc-C-------------cchHHHhCCCcCHHHHHHHHHHhc
Confidence            77777777776665543222111000   0000 0000000 0             000111234667889999999999


Q ss_pred             cCCCCCCCHHHHhcCCCC
Q 013973          409 YDPTDRLTAREALRHPFF  426 (433)
Q Consensus       409 ~dP~~R~ta~ell~hp~f  426 (433)
                      .||++||++.++++||||
T Consensus       269 ~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         269 IDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             CCcccchhHHHHhcCCCC
Confidence            999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=4.5e-42  Score=325.75  Aligned_cols=258  Identities=22%  Similarity=0.430  Sum_probs=197.7

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ++|++++.||+|+||.||+|.++.+|+.||+|.++...  ........|..++.+.    .+|++++++++.+...+.+|
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~----~~~~~iv~~~~~~~~~~~~~   76 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRS----VDCPYTVTFYGALFREGDVW   76 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHH----cCCCCeeeeeEEEecCCcEE
Confidence            36999999999999999999999999999999987432  2233444555543332    26789999999999999999


Q ss_pred             EEEecCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          175 IVFEKLGSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDL-CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       175 lV~e~~~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +||||+.++|.+++...  ....+++..+..++.||+.||+|||++ +|+||||||+|||++.                 
T Consensus        77 lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~-----------------  139 (283)
T cd06617          77 ICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINR-----------------  139 (283)
T ss_pred             EEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECC-----------------
Confidence            99999988998888653  224689999999999999999999997 9999999999999954                 


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCC--CCceeecCcccchhhhhC----CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILG----LGWTYPCDIWSVGCILVELCTGEALFQT  325 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~----~~~~~~~DvwSlGv~l~elltg~~Pf~~  325 (433)
                                ++.+||+|||.+......  .....|+..|+|||++.+    ..++.++|+|||||++|+|++|..||..
T Consensus       140 ----------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  209 (283)
T cd06617         140 ----------NGQVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDS  209 (283)
T ss_pred             ----------CCCEEEeecccccccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCc
Confidence                      445666777766543221  122468899999999865    4578999999999999999999999964


Q ss_pred             CC-hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHH
Q 013973          326 HE-NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  404 (433)
Q Consensus       326 ~~-~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  404 (433)
                      .. ..+.+.....  +..+                    ..+                         ...++.++.+||.
T Consensus       210 ~~~~~~~~~~~~~--~~~~--------------------~~~-------------------------~~~~~~~l~~li~  242 (283)
T cd06617         210 WKTPFQQLKQVVE--EPSP--------------------QLP-------------------------AEKFSPEFQDFVN  242 (283)
T ss_pred             cccCHHHHHHHHh--cCCC--------------------CCC-------------------------ccccCHHHHHHHH
Confidence            22 2222211110  0000                    000                         1235678999999


Q ss_pred             hccccCCCCCCCHHHHhcCCCCCCCCCC
Q 013973          405 GLLRYDPTDRLTAREALRHPFFTRDHLR  432 (433)
Q Consensus       405 ~~L~~dP~~R~ta~ell~hp~f~~~~~~  432 (433)
                      +||..+|++||++.++++||||.....+
T Consensus       243 ~~l~~~p~~Rp~~~~il~~~~~~~~~~~  270 (283)
T cd06617         243 KCLKKNYKERPNYPELLQHPFFELHLSK  270 (283)
T ss_pred             HHccCChhhCcCHHHHhcCchhhhcccc
Confidence            9999999999999999999999877543

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=1.3e-41  Score=329.90  Aligned_cols=282  Identities=28%  Similarity=0.503  Sum_probs=221.6

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec-C
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY-R  170 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~-~  170 (433)
                      ++++|++.+.||.|+||.||+|.+..+++.||+|.+...   .........|+++++.+     .|++++++.+++.. .
T Consensus         8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~~~   82 (328)
T cd07856           8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHL-----RHENIISLSDIFISPL   82 (328)
T ss_pred             cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhc-----CCCCeeeEeeeEecCC
Confidence            467899999999999999999999999999999987531   22345566789999888     67899999998865 5


Q ss_pred             CeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          171 NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       171 ~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      ...|+||||++++|.+++...   .+++..+..++.||+.||.|||++||+||||||+|||+++                
T Consensus        83 ~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~----------------  143 (328)
T cd07856          83 EDIYFVTELLGTDLHRLLTSR---PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINE----------------  143 (328)
T ss_pred             CcEEEEeehhccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECC----------------
Confidence            689999999988999888653   5889999999999999999999999999999999999954                


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCChH
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENL  329 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~  329 (433)
                                 ++.++|+|||.+...........++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+..
T Consensus       144 -----------~~~~~l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~  212 (328)
T cd07856         144 -----------NCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHV  212 (328)
T ss_pred             -----------CCCEEeCccccccccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence                       445666677766544333334567889999998866 56899999999999999999999999988888


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhh-hhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRH-AEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      ..+..+.+.++..|+++...+... ...++.......+                   ..........+.++.++|.+||+
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~li~~~l~  273 (328)
T cd07856         213 NQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREP-------------------VPFSEKFKNADPSAIDLLEKMLV  273 (328)
T ss_pred             HHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCC-------------------CcHHHHcCCCCHHHHHHHHHHcC
Confidence            888888888998887776543211 1111111000000                   00011223567789999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCC
Q 013973          409 YDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       409 ~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      .||++|||+.+++.||||...+
T Consensus       274 ~~P~~R~t~~ell~~~~~~~~~  295 (328)
T cd07856         274 FDPQKRISAAEALAHPYLAPYH  295 (328)
T ss_pred             CChhhCCCHHHHhcCCcccccc
Confidence            9999999999999999997553

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=7.3e-42  Score=324.94  Aligned_cols=258  Identities=23%  Similarity=0.399  Sum_probs=199.9

Q ss_pred             CceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEeccee----
Q 013973           92 GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF----  167 (433)
Q Consensus        92 ~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~----  167 (433)
                      .....++|++++.||+|+||.||+|.+..+++.||+|+++........+..|+.++..+.    .|+|++++++.+    
T Consensus        13 ~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~----~h~~i~~~~~~~~~~~   88 (286)
T cd06638          13 FPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALS----DHPNVVKFYGMYYKKD   88 (286)
T ss_pred             CCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHh----cCCCeeeeeeeeeecc
Confidence            334567899999999999999999999999999999998754444556677888888874    357899999876    


Q ss_pred             -ecCCeEEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCC
Q 013973          168 -DYRNHICIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY  243 (433)
Q Consensus       168 -~~~~~~~lV~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~df  243 (433)
                       ...+.+++||||+ +++|.+++...  ....+++..+..++.|++.||.|||+.+|+||||||+||+++++        
T Consensus        89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~--------  160 (286)
T cd06638          89 VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTE--------  160 (286)
T ss_pred             cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCC--------
Confidence             3456799999999 89999987632  22468999999999999999999999999999999999999544        


Q ss_pred             cCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhC-----CCCCCcchhHHHHHHHHH
Q 013973          244 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILG-----LGWTYPCDIWSVGCILVE  315 (433)
Q Consensus       244 g~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~e  315 (433)
                                         +.++|+|||++......   .....|++.|+|||++..     ..++.++|||||||++||
T Consensus       161 -------------------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~e  221 (286)
T cd06638         161 -------------------GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIE  221 (286)
T ss_pred             -------------------CCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHH
Confidence                               44666666666533221   123468999999999853     457899999999999999


Q ss_pred             HHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCc
Q 013973          316 LCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS  395 (433)
Q Consensus       316 lltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (433)
                      |++|..||...........+...   .                      .+.                     ...+...
T Consensus       222 l~~g~~p~~~~~~~~~~~~~~~~---~----------------------~~~---------------------~~~~~~~  255 (286)
T cd06638         222 LGDGDPPLADLHPMRALFKIPRN---P----------------------PPT---------------------LHQPELW  255 (286)
T ss_pred             HhcCCCCCCCCchhHHHhhcccc---C----------------------CCc---------------------ccCCCCc
Confidence            99999999765443322111000   0                      000                     0011234


Q ss_pred             hhHHHHHHHhccccCCCCCCCHHHHhcCCCC
Q 013973          396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF  426 (433)
Q Consensus       396 ~~~~~~li~~~L~~dP~~R~ta~ell~hp~f  426 (433)
                      +.++.+||.+||+.||++|||+.|+++|+||
T Consensus       256 ~~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         256 SNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence            5679999999999999999999999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=7.9e-42  Score=318.99  Aligned_cols=250  Identities=26%  Similarity=0.396  Sum_probs=204.8

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      +|++.+.||+|+||.||+|.+..+++.+|+|.+...   ......+..|+.+++.+     .|++++++++.+...+.++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~~~~~   75 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLL-----SHPNIIEYYENFLEDKALM   75 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhC-----CCCchhheeeeEecCCEEE
Confidence            489999999999999999999999999999998642   23345677788888888     6688999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +||||+ +++|.+++.......+++..+..++.|++.||+|||++||+|+||||+||+++.+                  
T Consensus        76 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~------------------  137 (256)
T cd08220          76 IVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKH------------------  137 (256)
T ss_pred             EEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC------------------
Confidence            999999 8899999987655568999999999999999999999999999999999999532                  


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                              +..++|+|||.+.......  ....|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+....
T Consensus       138 --------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~  209 (256)
T cd08220         138 --------KMVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPAL  209 (256)
T ss_pred             --------CCEEEEccCCCceecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHH
Confidence                    2346777777765443222  234689999999999988899999999999999999999999987654443


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      ...+....                                                ..+.++..+.++.+++.+||+.||
T Consensus       210 ~~~~~~~~------------------------------------------------~~~~~~~~~~~l~~li~~~l~~~p  241 (256)
T cd08220         210 VLKIMSGT------------------------------------------------FAPISDRYSPDLRQLILSMLNLDP  241 (256)
T ss_pred             HHHHHhcC------------------------------------------------CCCCCCCcCHHHHHHHHHHccCCh
Confidence            32221100                                                001123456789999999999999


Q ss_pred             CCCCCHHHHhcCCCC
Q 013973          412 TDRLTAREALRHPFF  426 (433)
Q Consensus       412 ~~R~ta~ell~hp~f  426 (433)
                      ++|||+.|+++||||
T Consensus       242 ~~Rpt~~~ll~~p~~  256 (256)
T cd08220         242 SKRPQLSQIMAQPIC  256 (256)
T ss_pred             hhCCCHHHHhhCCCC
Confidence            999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=4.4e-42  Score=320.74  Aligned_cols=250  Identities=26%  Similarity=0.451  Sum_probs=202.4

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  176 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV  176 (433)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.+..... .+.+..|+++++.+     .|++++++++.+.....+|++
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l-----~~~~i~~~~~~~~~~~~~~l~   76 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQC-----DSPYIVKYYGSYFKNTDLWIV   76 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhC-----CCCcEeeeeeeeecCCcEEEE
Confidence            569999999999999999999999899999999975433 56788899998888     678999999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          177 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       177 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      +||+ +++|.+++.... ..+++..+..++.|++.||.|||+.+|+|+||+|+||++++++                   
T Consensus        77 ~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~-------------------  136 (256)
T cd06612          77 MEYCGAGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEG-------------------  136 (256)
T ss_pred             EecCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCC-------------------
Confidence            9999 889999997644 4789999999999999999999999999999999999995544                   


Q ss_pred             cccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHH
Q 013973          256 FKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL  332 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~  332 (433)
                              .++|+|||.+......   .....|+..|+|||++.+..++.++||||||+++|+|++|..||.........
T Consensus       137 --------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~  208 (256)
T cd06612         137 --------QAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAI  208 (256)
T ss_pred             --------cEEEcccccchhcccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhh
Confidence                    4566666655433221   12345888999999999989999999999999999999999999765443221


Q ss_pred             HHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCC
Q 013973          333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPT  412 (433)
Q Consensus       333 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  412 (433)
                      ..+..   .                       .+.                    ....+..++.++.++|.+||+.||+
T Consensus       209 ~~~~~---~-----------------------~~~--------------------~~~~~~~~~~~~~~~i~~~l~~~P~  242 (256)
T cd06612         209 FMIPN---K-----------------------PPP--------------------TLSDPEKWSPEFNDFVKKCLVKDPE  242 (256)
T ss_pred             hhhcc---C-----------------------CCC--------------------CCCchhhcCHHHHHHHHHHHhcChh
Confidence            11000   0                       000                    0001123456899999999999999


Q ss_pred             CCCCHHHHhcCCCC
Q 013973          413 DRLTAREALRHPFF  426 (433)
Q Consensus       413 ~R~ta~ell~hp~f  426 (433)
                      +|||+.|+|+||||
T Consensus       243 ~Rps~~~il~~~~~  256 (256)
T cd06612         243 ERPSAIQLLQHPFI  256 (256)
T ss_pred             hCcCHHHHhcCCCC
Confidence            99999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=3.3e-42  Score=335.17  Aligned_cols=298  Identities=25%  Similarity=0.425  Sum_probs=219.8

Q ss_pred             cCcEEE-EeeeeccccEEEEEEEECCCCeEEEEEEeecchhhH---------------HHHHHHHHHHHHHHhcCCCCCc
Q 013973           96 TSRYKI-HSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR---------------EAAMIEIEVLQQLAKHDKGGNR  159 (433)
Q Consensus        96 ~~~~~~-~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~---------------~~~~~E~~~l~~l~~~~~~~~~  159 (433)
                      .++|.. .+.||+|+||+||+|.+..+++.||+|+++......               ..+..|+++++.+     .|++
T Consensus         7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~   81 (335)
T PTZ00024          7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEI-----KHEN   81 (335)
T ss_pred             ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhC-----CCcc
Confidence            456764 577999999999999999999999999986432111               1356788888888     6789


Q ss_pred             eEEecceeecCCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccc
Q 013973          160 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIK  239 (433)
Q Consensus       160 i~~~~~~~~~~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~  239 (433)
                      ++++++++...+..|+||||+.++|.+++....  .+++..+..++.|++.||+|||+.||+|+||||+||+++.++.++
T Consensus        82 iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~k  159 (335)
T PTZ00024         82 IMGLVDVYVEGDFINLVMDIMASDLKKVVDRKI--RLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICK  159 (335)
T ss_pred             eeeeeEEEecCCcEEEEEeccccCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEE
Confidence            999999999999999999999889999997654  699999999999999999999999999999999999998888888


Q ss_pred             cCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHh
Q 013973          240 VPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCT  318 (433)
Q Consensus       240 i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~ellt  318 (433)
                      ++|||++.....+.....        .-.+.+..  .........++..|+|||++.+. .++.++|+|||||++|+|++
T Consensus       160 l~dfg~~~~~~~~~~~~~--------~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~t  229 (335)
T PTZ00024        160 IADFGLARRYGYPPYSDT--------LSKDETMQ--RREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLT  229 (335)
T ss_pred             ECCccceeeccccccccc--------cccccccc--ccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHh
Confidence            888887654432111000        00000000  00111223578899999998764 47899999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhH
Q 013973          319 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  398 (433)
Q Consensus       319 g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (433)
                      |.+||.+.++.+.+..+...++..+...+..........        +....             ............+.+
T Consensus       230 g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--------~~~~~-------------~~~~~~~~~~~~~~~  288 (335)
T PTZ00024        230 GKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYT--------EFTPR-------------KPKDLKTIFPNASDD  288 (335)
T ss_pred             CCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhccccc--------ccCcC-------------CcccHHHhCcCCChH
Confidence            999999988888887777777665544322211100000        00000             000011122355778


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhcCCCCCCCCC
Q 013973          399 LTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL  431 (433)
Q Consensus       399 ~~~li~~~L~~dP~~R~ta~ell~hp~f~~~~~  431 (433)
                      +.+||.+||+.||++|||++|+|.||||+...+
T Consensus       289 ~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~~  321 (335)
T PTZ00024        289 AIDLLQSLLKLNPLERISAKEALKHEYFKSDPL  321 (335)
T ss_pred             HHHHHHHHcCCCchhccCHHHHhcCcccCCCCC
Confidence            999999999999999999999999999997765

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=5.8e-42  Score=325.57  Aligned_cols=237  Identities=16%  Similarity=0.162  Sum_probs=191.4

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecchhh----HHHHHHHHHHHHHHHhcCCCCCceEEecceeec----CCeEE
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY----REAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY----RNHIC  174 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~----~~~~~  174 (433)
                      ..||+|++|.||+|..  +|+.||||.++.....    .+.+..|+.++.++     .|+||+++++++.+    ...++
T Consensus        26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~nIv~~~g~~~~~~~~~~~~~   98 (283)
T PHA02988         26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRI-----DSNNILKIYGFIIDIVDDLPRLS   98 (283)
T ss_pred             eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhc-----CCCCEEEEeeeEEecccCCCceE
Confidence            5799999999999987  6889999998754322    35566899999998     66899999998866    45789


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      +||||+ +|+|.+++.+..  .+++.....++.|++.||.|||+ .+++||||||+|||++                   
T Consensus        99 lv~Ey~~~g~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~-------------------  157 (283)
T PHA02988         99 LILEYCTRGYLREVLDKEK--DLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVT-------------------  157 (283)
T ss_pred             EEEEeCCCCcHHHHHhhCC--CCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEEC-------------------
Confidence            999999 899999998754  78999999999999999999998 4999999999999994                   


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhC--CCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                              .++.+||+|||++...........||..|+|||++.+  ..++.++|||||||++|||++|..||.+.+..+
T Consensus       158 --------~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~  229 (283)
T PHA02988        158 --------ENYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE  229 (283)
T ss_pred             --------CCCcEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH
Confidence                    4456777777776654433344578999999999986  679999999999999999999999998776555


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+......                     +.                          .+...+.++++||.+||+.|
T Consensus       230 ~~~~i~~~~~~---------------------~~--------------------------~~~~~~~~l~~li~~cl~~d  262 (283)
T PHA02988        230 IYDLIINKNNS---------------------LK--------------------------LPLDCPLEIKCIVEACTSHD  262 (283)
T ss_pred             HHHHHHhcCCC---------------------CC--------------------------CCCcCcHHHHHHHHHHhcCC
Confidence            44332211000                     00                          11245678999999999999


Q ss_pred             CCCCCCHHHHhc
Q 013973          411 PTDRLTAREALR  422 (433)
Q Consensus       411 P~~R~ta~ell~  422 (433)
                      |++|||+.|+++
T Consensus       263 p~~Rps~~ell~  274 (283)
T PHA02988        263 SIKRPNIKEILY  274 (283)
T ss_pred             cccCcCHHHHHH
Confidence            999999999985

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=2e-42  Score=325.48  Aligned_cols=251  Identities=24%  Similarity=0.409  Sum_probs=197.1

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      ++|++.+.||+|+||.||+|.+..+++.||+|+++... .....+..|+.+++.+     .|++++++++.+...+.+|+
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l-----~h~~ii~~~~~~~~~~~~~l   83 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDC-----KHSNIVAYFGSYLRRDKLWI   83 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhC-----CCCCeeeEEEEEEeCCEEEE
Confidence            46899999999999999999999999999999987432 2234456788888777     67899999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      ||||+ +++|.+++...+  .+++..+..++.|++.||.|||+.||+|+||||+||+++.++                  
T Consensus        84 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~------------------  143 (267)
T cd06645          84 CMEFCGGGSLQDIYHVTG--PLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNG------------------  143 (267)
T ss_pred             EEeccCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC------------------
Confidence            99999 889999987654  799999999999999999999999999999999999995444                  


Q ss_pred             ccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhh---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                               .++|+|||.+......   .....||..|+|||++.   ...++.++|+|||||++|+|++|..||.....
T Consensus       144 ---------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~  214 (267)
T cd06645         144 ---------HVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHP  214 (267)
T ss_pred             ---------CEEECcceeeeEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccc
Confidence                     4566666655432211   12346899999999985   44588999999999999999999999965443


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      ......+..                       .....+.                     ......++..+.+||.+||+
T Consensus       215 ~~~~~~~~~-----------------------~~~~~~~---------------------~~~~~~~~~~~~~li~~~l~  250 (267)
T cd06645         215 MRALFLMTK-----------------------SNFQPPK---------------------LKDKMKWSNSFHHFVKMALT  250 (267)
T ss_pred             hhhHHhhhc-----------------------cCCCCCc---------------------ccccCCCCHHHHHHHHHHcc
Confidence            322211100                       0000000                     00011345678999999999


Q ss_pred             cCCCCCCCHHHHhcCCC
Q 013973          409 YDPTDRLTAREALRHPF  425 (433)
Q Consensus       409 ~dP~~R~ta~ell~hp~  425 (433)
                      .||++|||+.++++|||
T Consensus       251 ~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         251 KNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             CCchhCcCHHHHhcCCC
Confidence            99999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=3.1e-42  Score=324.19  Aligned_cols=252  Identities=23%  Similarity=0.378  Sum_probs=196.7

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++.... ........|+.+++++     .|++++++++.+...+.++
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~-----~h~~ii~~~~~~~~~~~~~   82 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKEC-----KHCNIVAYFGSYLSREKLW   82 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhc-----CCCCeeeeeEEEEeCCEEE
Confidence            357999999999999999999999999999999986432 2334566788888877     6789999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +||||+ +++|.+++....  .+++..+..++.|++.||.|||+.||+||||||+||++++++                 
T Consensus        83 iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~-----------------  143 (267)
T cd06646          83 ICMEYCGGGSLQDIYHVTG--PLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNG-----------------  143 (267)
T ss_pred             EEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC-----------------
Confidence            999999 789999987654  789999999999999999999999999999999999995544                 


Q ss_pred             cccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhh---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                                .++|+|||.+......   .....|+..|+|||.+.   ...++.++|+|||||++|||++|..||....
T Consensus       144 ----------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~  213 (267)
T cd06646         144 ----------DVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLH  213 (267)
T ss_pred             ----------CEEECcCccceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccc
Confidence                      4566666655432211   12346889999999985   3457889999999999999999999996543


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ..+....+                       ....+..+.                     ......++..+.+||.+||
T Consensus       214 ~~~~~~~~-----------------------~~~~~~~~~---------------------~~~~~~~~~~~~~li~~~l  249 (267)
T cd06646         214 PMRALFLM-----------------------SKSNFQPPK---------------------LKDKTKWSSTFHNFVKISL  249 (267)
T ss_pred             hhhhheee-----------------------ecCCCCCCC---------------------CccccccCHHHHHHHHHHh
Confidence            32211110                       000000000                     0001235678999999999


Q ss_pred             ccCCCCCCCHHHHhcCCC
Q 013973          408 RYDPTDRLTAREALRHPF  425 (433)
Q Consensus       408 ~~dP~~R~ta~ell~hp~  425 (433)
                      +.||++|||++++++|+|
T Consensus       250 ~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         250 TKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             hCChhhCcCHHHHhcCCC
Confidence            999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=3.5e-42  Score=348.71  Aligned_cols=245  Identities=29%  Similarity=0.418  Sum_probs=200.6

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeec-chhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee-c-----
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG-IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD-Y-----  169 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~-~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~-~-----  169 (433)
                      .+++|.+.|.+|||+.||+|.+...+..||+|.+-. .+.......+|+++|+.|.    +|+|||.+++... .     
T Consensus        37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~----gh~nIV~yidss~~~~~~~~  112 (738)
T KOG1989|consen   37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLS----GHKNIVSYIDSSAINRSSNN  112 (738)
T ss_pred             EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhc----CCCceeeEeccccccccCCC
Confidence            468899999999999999999998888899998754 3445566788999999994    6788999999322 1     


Q ss_pred             -CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCceEeeccCccccCCCcC
Q 013973          170 -RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC--MIHTDLKPENVLLVSSEYIKVPDYKS  245 (433)
Q Consensus       170 -~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlKp~NILl~~~~~~~i~dfg~  245 (433)
                       .-.++|+|||| ||+|-|++.++...+|++.++++|+.|+++|+.+||...  |||||||-|||||..           
T Consensus       113 ~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~-----------  181 (738)
T KOG1989|consen  113 GVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSA-----------  181 (738)
T ss_pred             ceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcC-----------
Confidence             23688999999 799999999777678999999999999999999999988  999999999999954           


Q ss_pred             CCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-C-----------ceeecCcccchhhhh---CCCCCCcchhHHHH
Q 013973          246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-N-----------YIVSTRHYRAPEVIL---GLGWTYPCDIWSVG  310 (433)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~-----------~~~gt~~y~aPE~~~---~~~~~~~~DvwSlG  310 (433)
                                      +++.||||||.++-.-... .           ...-|+.|+|||++.   +...+.|+||||||
T Consensus       182 ----------------~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALG  245 (738)
T KOG1989|consen  182 ----------------DGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALG  245 (738)
T ss_pred             ----------------CCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHH
Confidence                            4466777777665221111 1           124699999999986   56789999999999


Q ss_pred             HHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhh
Q 013973          311 CILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ  390 (433)
Q Consensus       311 v~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (433)
                      |+||-|+....||+......                           |..|.+.+|+                       
T Consensus       246 clLYkLCy~t~PFe~sg~la---------------------------Ilng~Y~~P~-----------------------  275 (738)
T KOG1989|consen  246 CLLYKLCYFTTPFEESGKLA---------------------------ILNGNYSFPP-----------------------  275 (738)
T ss_pred             HHHHHHHHhCCCcCcCccee---------------------------EEeccccCCC-----------------------
Confidence            99999999999998653322                           5566666665                       


Q ss_pred             hcCCchhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          391 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       391 ~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                       .+.++..+++||+.||+.||.+||++-||+.+
T Consensus       276 -~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~  307 (738)
T KOG1989|consen  276 -FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEE  307 (738)
T ss_pred             -CccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence             24677889999999999999999999999875

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-42  Score=336.31  Aligned_cols=209  Identities=25%  Similarity=0.360  Sum_probs=177.5

Q ss_pred             CCceeecCceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhh-HHHHHHHHHHHHHHHhcCCCCCceEEe
Q 013973           85 GHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY-REAAMIEIEVLQQLAKHDKGGNRCVQI  163 (433)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~E~~~l~~l~~~~~~~~~i~~~  163 (433)
                      ..|.+......+++|.-.+.||+|+||.||+|...++ ..||||.+...... ..++..|++++.++     +|+|++++
T Consensus        63 ~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~-~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l-----~H~Nlv~L  136 (361)
T KOG1187|consen   63 RSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDG-TVVAVKRLSSNSGQGEREFLNEVEILSRL-----RHPNLVKL  136 (361)
T ss_pred             ceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCC-CEEEEEEecCCCCcchhHHHHHHHHHhcC-----CCcCcccE
Confidence            3456666667789999999999999999999988655 78999988754443 45599999999999     67999999


Q ss_pred             cceeecCC-eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCCCceEeeccCcc
Q 013973          164 RNWFDYRN-HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC---MIHTDLKPENVLLVSSEYI  238 (433)
Q Consensus       164 ~~~~~~~~-~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlKp~NILl~~~~~~  238 (433)
                      +++|.+.+ +.+||+||| +|+|.++|+......++|..+.+|+.++|+||+|||+..   |||||||++|||+      
T Consensus       137 lGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL------  210 (361)
T KOG1187|consen  137 LGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL------  210 (361)
T ss_pred             EEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE------
Confidence            99999988 599999999 899999998765337899999999999999999999865   9999999999999      


Q ss_pred             ccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCC-CCCc--e-eecCcccchhhhhCCCCCCcchhHHHHHHHH
Q 013973          239 KVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP-DQNY--I-VSTRHYRAPEVILGLGWTYPCDIWSVGCILV  314 (433)
Q Consensus       239 ~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~--~-~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~  314 (433)
                                           |++..+||+|||+|..... ....  . .||.+|+|||++.....+.++|||||||+|+
T Consensus       211 ---------------------D~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvll  269 (361)
T KOG1187|consen  211 ---------------------DEDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLL  269 (361)
T ss_pred             ---------------------CCCCCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHH
Confidence                                 5566677777777754443 2222  2 7999999999999989999999999999999


Q ss_pred             HHHhCCCCCCCC
Q 013973          315 ELCTGEALFQTH  326 (433)
Q Consensus       315 elltg~~Pf~~~  326 (433)
                      ||+||+.|....
T Consensus       270 Elitgr~~~d~~  281 (361)
T KOG1187|consen  270 ELITGRKAVDQS  281 (361)
T ss_pred             HHHhCCcccCCC
Confidence            999999888743

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3.4e-42  Score=334.20  Aligned_cols=279  Identities=29%  Similarity=0.504  Sum_probs=218.7

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC---
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN---  171 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~---  171 (433)
                      +|++.+.||+|+||.||+|.+..+++.||||.+...   ....+.+..|+.+++.+     +|++++++.+++....   
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   75 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHL-----RHENIIGLLDILRPPSPED   75 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhc-----CCcchhhhhhhhcccCccc
Confidence            589999999999999999999999999999988643   22345677889998888     5788999999987765   


Q ss_pred             --eEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          172 --HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       172 --~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                        .+|+||||++++|.+++....  .+++..+..++.||+.||+|||+.||+|+||||+|||++.++             
T Consensus        76 ~~~~~lv~e~~~~~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~-------------  140 (330)
T cd07834          76 FNDVYIVTELMETDLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNC-------------  140 (330)
T ss_pred             ccceEEEecchhhhHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC-------------
Confidence              899999999889999987654  799999999999999999999999999999999999996555             


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCC------CCceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPD------QNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEAL  322 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~P  322 (433)
                                    .++|+|||.+......      .....+|..|+|||++.+. .++.++|+||||+++|+|++|.+|
T Consensus       141 --------------~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~p  206 (330)
T cd07834         141 --------------DLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPL  206 (330)
T ss_pred             --------------CEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCC
Confidence                          4555555554433222      1224678999999999887 789999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHh-hhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          323 FQTHENLEHLAMMERVLGPLPQHMLKRVD-RHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       323 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      |.+.+..+.+..+....+..+...+.... .....++......                  . ........+..+.++.+
T Consensus       207 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~-~~~~~~~~~~~~~~~~~  267 (330)
T cd07834         207 FPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKK------------------P-KKPLSKLFPGASPEAID  267 (330)
T ss_pred             cCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccC------------------C-cchhHHhcccCCHHHHH
Confidence            99999888888888888877765544211 1111111110000                  0 00011123456788999


Q ss_pred             HHHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          402 LLQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       402 li~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      ||.+||++||++|||+.++++||||++-
T Consensus       268 li~~~l~~~P~~Rpt~~~ll~~~~~~~~  295 (330)
T cd07834         268 LLEKMLVFDPKKRITADEALAHPYLAQL  295 (330)
T ss_pred             HHHHHccCChhhCCCHHHHHhCccHHhh
Confidence            9999999999999999999999999754

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=5.7e-42  Score=322.25  Aligned_cols=256  Identities=27%  Similarity=0.411  Sum_probs=199.8

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----------hhHHHHHHHHHHHHHHHhcCCCCCceEEeccee
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  167 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----------~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~  167 (433)
                      +|.+.+.||+|+||.||+|.+..+++.||+|.+....          ...+.+..|+.+++++     .|++++++++++
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~   75 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKEL-----QHENIVQYLGSS   75 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhc-----CCCCeeeEEEEE
Confidence            3778899999999999999999999999999885321          1224566788888888     678999999999


Q ss_pred             ecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCC
Q 013973          168 DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  246 (433)
Q Consensus       168 ~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~  246 (433)
                      ...+..++||||+ +++|.+++...+  .+++..+..++.|++.||+|||+.||+||||||+||++++++.++|+|||.+
T Consensus        76 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~  153 (267)
T cd06628          76 LDADHLNIFLEYVPGGSVAALLNNYG--AFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGIS  153 (267)
T ss_pred             EeCCccEEEEEecCCCCHHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCC
Confidence            9999999999999 889999997754  7899999999999999999999999999999999999977666666666654


Q ss_pred             CCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          247 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                      .........                  ...........|+..|+|||.+.+..++.++|+|||||++|+|++|..||...
T Consensus       154 ~~~~~~~~~------------------~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~  215 (267)
T cd06628         154 KKLEANSLS------------------TKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDC  215 (267)
T ss_pred             ccccccccc------------------CCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCc
Confidence            433211000                  00000112235889999999999888999999999999999999999999875


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      +.......+...  ..                                              ...+...+.++.++|.+|
T Consensus       216 ~~~~~~~~~~~~--~~----------------------------------------------~~~~~~~~~~~~~li~~~  247 (267)
T cd06628         216 TQLQAIFKIGEN--AS----------------------------------------------PEIPSNISSEAIDFLEKT  247 (267)
T ss_pred             cHHHHHHHHhcc--CC----------------------------------------------CcCCcccCHHHHHHHHHH
Confidence            543322211110  00                                              011234567899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFF  426 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f  426 (433)
                      |+.||.+||++.|+++||||
T Consensus       248 l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         248 FEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             ccCCchhCcCHHHHhhCCCC
Confidence            99999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=8.3e-42  Score=320.70  Aligned_cols=255  Identities=25%  Similarity=0.395  Sum_probs=201.4

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ++|++.+.||.|+||+||+|....++..+|+|++....  .....+..|+++++.+     .|++++++++.+......+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   75 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQC-----NHPNVVKYYTSFVVGDELW   75 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhc-----CCCCEEEEEEEEeeCCEEE
Confidence            36999999999999999999999899999999986322  2445677888888877     6688999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNY-RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      +|||++ +++|.+++..... ..+++..+..++.|++.||.|||+.||+|+||||+||++++++                
T Consensus        76 iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~----------------  139 (267)
T cd06610          76 LVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDG----------------  139 (267)
T ss_pred             EEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCC----------------
Confidence            999999 8999999976432 4689999999999999999999999999999999999996544                


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCC-------CCceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCC
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPD-------QNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                                 .++|+|||.+......       .....|+..|+|||++... .++.++|+|||||++|+|++|..||.
T Consensus       140 -----------~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~  208 (267)
T cd06610         140 -----------SVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYS  208 (267)
T ss_pred             -----------CEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCcc
Confidence                       4555555554322221       1234689999999999876 78999999999999999999999997


Q ss_pred             CCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHH
Q 013973          325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  404 (433)
Q Consensus       325 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  404 (433)
                      ..+....+.....   ..+.                   ..+.                     ......++.++.+|+.
T Consensus       209 ~~~~~~~~~~~~~---~~~~-------------------~~~~---------------------~~~~~~~~~~~~~li~  245 (267)
T cd06610         209 KYPPMKVLMLTLQ---NDPP-------------------SLET---------------------GADYKKYSKSFRKMIS  245 (267)
T ss_pred             ccChhhhHHHHhc---CCCC-------------------CcCC---------------------ccccccccHHHHHHHH
Confidence            6554432222111   0000                   0000                     0001255678999999


Q ss_pred             hccccCCCCCCCHHHHhcCCCC
Q 013973          405 GLLRYDPTDRLTAREALRHPFF  426 (433)
Q Consensus       405 ~~L~~dP~~R~ta~ell~hp~f  426 (433)
                      +||+.||++||++.|+++||||
T Consensus       246 ~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         246 LCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             HHcCCChhhCcCHHHHhhCCCC
Confidence            9999999999999999999998

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7e-42  Score=320.49  Aligned_cols=249  Identities=25%  Similarity=0.448  Sum_probs=193.9

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecchhhH----HHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEe
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR----EAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  178 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~----~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e  178 (433)
                      +.||+|+||.||+|.+..+++.||+|+++......    .....|..++.    ....|++++++++.+...+.+|+|||
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~----~~~~~~~i~~~~~~~~~~~~~~lv~e   77 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMM----IQGESPYVAKLYYSFQSKDYLYLVME   77 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHh----hcCCCCCeeeeeeeEEcCCeEEEEEe
Confidence            57999999999999999999999999986432211    11222333222    22367899999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccc
Q 013973          179 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  257 (433)
Q Consensus       179 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~  257 (433)
                      |+ +++|.+++....  .+++..+..++.||+.||.|||+.||+|+||+|+||++++                       
T Consensus        78 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~-----------------------  132 (260)
T cd05611          78 YLNGGDCASLIKTLG--GLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQ-----------------------  132 (260)
T ss_pred             ccCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC-----------------------
Confidence            99 899999998754  6899999999999999999999999999999999999944                       


Q ss_pred             cCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 013973          258 RMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER  337 (433)
Q Consensus       258 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~i~~  337 (433)
                          ++.++|+|||++..... .....|+..|+|||.+.+..++.++||||||+++|+|++|..||...+..+....+..
T Consensus       133 ----~~~~~l~dfg~~~~~~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  207 (260)
T cd05611         133 ----TGHLKLTDFGLSRNGLE-NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILS  207 (260)
T ss_pred             ----CCcEEEeecccceeccc-cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence                45577777776654322 2234688999999999988899999999999999999999999987655443322211


Q ss_pred             HhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCC-
Q 013973          338 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT-  416 (433)
Q Consensus       338 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-  416 (433)
                                             +...++..                      ....++.++.++|.+||+.||++||+ 
T Consensus       208 -----------------------~~~~~~~~----------------------~~~~~~~~~~~~i~~~l~~~p~~R~~~  242 (260)
T cd05611         208 -----------------------RRINWPEE----------------------VKEFCSPEAVDLINRLLCMDPAKRLGA  242 (260)
T ss_pred             -----------------------cccCCCCc----------------------ccccCCHHHHHHHHHHccCCHHHccCC
Confidence                                   11111110                      11245678999999999999999995 


Q ss_pred             --HHHHhcCCCCCCCC
Q 013973          417 --AREALRHPFFTRDH  430 (433)
Q Consensus       417 --a~ell~hp~f~~~~  430 (433)
                        ++|++.||||++.+
T Consensus       243 ~~~~~~l~~~~~~~~~  258 (260)
T cd05611         243 NGYQEIKSHPFFKSIN  258 (260)
T ss_pred             CcHHHHHcChHhhcCC
Confidence              47999999998653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7e-42  Score=322.46  Aligned_cols=254  Identities=25%  Similarity=0.432  Sum_probs=199.6

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC-----
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR-----  170 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~-----  170 (433)
                      .++|++.+.||+|++|.||+|.++.+++.||+|++.......+.+..|+.+++++.    .|++++++++.+...     
T Consensus         5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~----~h~~i~~~~~~~~~~~~~~~   80 (275)
T cd06608           5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYS----NHPNIATFYGAFIKKNPPGN   80 (275)
T ss_pred             hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhc----CCCChheEEEEEEecCCCCc
Confidence            47899999999999999999999999999999999865555567788999888873    357899999998654     


Q ss_pred             -CeEEEEEecC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCC
Q 013973          171 -NHICIVFEKL-GSSLYDFLRKNN--YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  246 (433)
Q Consensus       171 -~~~~lV~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~  246 (433)
                       ..+++||||+ +++|.+++....  ...+++..+..++.|++.||.|||+.||+|+||+|+||+++.+           
T Consensus        81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~-----------  149 (275)
T cd06608          81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKN-----------  149 (275)
T ss_pred             ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccC-----------
Confidence             4589999999 889999887533  3579999999999999999999999999999999999999544           


Q ss_pred             CCCCCCCcccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhC-----CCCCCcchhHHHHHHHHHHHh
Q 013973          247 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILG-----LGWTYPCDIWSVGCILVELCT  318 (433)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~ellt  318 (433)
                                      +.++|+|||.+......   .....|+..|+|||++..     ..++.++|||||||++|+|++
T Consensus       150 ----------------~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~  213 (275)
T cd06608         150 ----------------AEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELAD  213 (275)
T ss_pred             ----------------CeEEECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHh
Confidence                            45666666655432211   123468999999999864     346789999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhH
Q 013973          319 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  398 (433)
Q Consensus       319 g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (433)
                      |..||...........+...  . +.                   .+                        .....++.+
T Consensus       214 g~~p~~~~~~~~~~~~~~~~--~-~~-------------------~~------------------------~~~~~~~~~  247 (275)
T cd06608         214 GKPPLCDMHPMRALFKIPRN--P-PP-------------------TL------------------------KSPENWSKK  247 (275)
T ss_pred             CCCCccccchHHHHHHhhcc--C-CC-------------------CC------------------------CchhhcCHH
Confidence            99999765443333221110  0 00                   00                        001234668


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhcCCCC
Q 013973          399 LTHLLQGLLRYDPTDRLTAREALRHPFF  426 (433)
Q Consensus       399 ~~~li~~~L~~dP~~R~ta~ell~hp~f  426 (433)
                      +.+||.+||..||++|||+.|+++|||+
T Consensus       248 ~~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         248 FNDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             HHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence            9999999999999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=4.9e-42  Score=321.18  Aligned_cols=247  Identities=25%  Similarity=0.427  Sum_probs=202.5

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      +|++.+.||.|+||.||+|.+..+++.||+|++....    ...+.+..|+++++++     +|+|++++++.+.....+
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~   75 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL-----NHPFLVNLWYSFQDEENM   75 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhC-----CCCChHHHHHhhcCCCeE
Confidence            4899999999999999999999999999999987432    3345677788888887     678999999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      ++||||+ |++|.+++...  ..+++..+..++.||+.||.|||++||+|+||||+||++++                  
T Consensus        76 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~------------------  135 (258)
T cd05578          76 YLVVDLLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDE------------------  135 (258)
T ss_pred             EEEEeCCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcC------------------
Confidence            9999999 99999999876  37999999999999999999999999999999999999954                  


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCC--CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChH-
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL-  329 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~-  329 (433)
                               ++.++|+|||.+......  .....|+..|+|||++.+..++.++|+||||+++|+|++|..||...+.. 
T Consensus       136 ---------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~  206 (258)
T cd05578         136 ---------QGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI  206 (258)
T ss_pred             ---------CCCEEEeecccccccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH
Confidence                     445677777766544332  12346888999999999888999999999999999999999999876531 


Q ss_pred             -HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          330 -EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       330 -~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                       +.+.....                      ..                          ....+...+.++.++|.+||+
T Consensus       207 ~~~~~~~~~----------------------~~--------------------------~~~~~~~~~~~~~~~i~~~l~  238 (258)
T cd05578         207 RDQIRAKQE----------------------TA--------------------------DVLYPATWSTEAIDAINKLLE  238 (258)
T ss_pred             HHHHHHHhc----------------------cc--------------------------cccCcccCcHHHHHHHHHHcc
Confidence             11111000                      00                          011123456789999999999


Q ss_pred             cCCCCCCCH--HHHhcCCCC
Q 013973          409 YDPTDRLTA--REALRHPFF  426 (433)
Q Consensus       409 ~dP~~R~ta--~ell~hp~f  426 (433)
                      .||.+||++  .|+++||||
T Consensus       239 ~~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         239 RDPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             CChhHcCCccHHHHhcCCCC
Confidence            999999999  999999998

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=7.4e-42  Score=321.55  Aligned_cols=253  Identities=25%  Similarity=0.469  Sum_probs=201.0

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-------hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      +|+..+.||+|+||.||+|.+..+++.||+|++....       .....+..|+.+++.+     .|++++++++.+.+.
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~   75 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL-----NHPHIIRMLGATCED   75 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHc-----CCCceehhhceeccC
Confidence            3788899999999999999999999999999986322       1345677899999888     668899999999999


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      +.+++||||+ +++|.+++....  .+++..+..++.||+.||.|||++|++|+||||+||+++.++             
T Consensus        76 ~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~-------------  140 (268)
T cd06630          76 SHFNLFVEWMAGGSVSHLLSKYG--AFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTG-------------  140 (268)
T ss_pred             CeEEEEEeccCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC-------------
Confidence            9999999999 899999997654  789999999999999999999999999999999999995433             


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCC-------CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPD-------QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL  322 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P  322 (433)
                                   ..++|+|||.+......       .....||..|+|||++.+..++.++|+||||+++|+|++|..|
T Consensus       141 -------------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p  207 (268)
T cd06630         141 -------------QRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPP  207 (268)
T ss_pred             -------------CEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCC
Confidence                         23566666665433221       1234688999999999988899999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       323 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      |...........+.....                  ..+                          ....++.++.++.++
T Consensus       208 ~~~~~~~~~~~~~~~~~~------------------~~~--------------------------~~~~~~~~~~~~~~~  243 (268)
T cd06630         208 WNAEKHSNHLALIFKIAS------------------ATT--------------------------APSIPEHLSPGLRDV  243 (268)
T ss_pred             CCCCCCcchHHHHHHHhc------------------cCC--------------------------CCCCchhhCHHHHHH
Confidence            975433222211111100                  000                          001123456789999


Q ss_pred             HHhccccCCCCCCCHHHHhcCCCCC
Q 013973          403 LQGLLRYDPTDRLTAREALRHPFFT  427 (433)
Q Consensus       403 i~~~L~~dP~~R~ta~ell~hp~f~  427 (433)
                      +.+||+.||++||++.|+++||||+
T Consensus       244 i~~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         244 TLRCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             HHHHcCCCcccCcCHHHHhcCcccC
Confidence            9999999999999999999999995

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-43  Score=343.87  Aligned_cols=250  Identities=26%  Similarity=0.404  Sum_probs=202.3

Q ss_pred             eeeccccEEEEEEEECCCCeEEEEEEeec-chhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecC-C
Q 013973          104 KMGEGTFGQVLECWDRERKEMVAIKIVRG-IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-G  181 (433)
Q Consensus       104 ~iG~G~~g~V~~~~~~~~~~~vAiK~~~~-~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~-~  181 (433)
                      +||+|.||+||.|++..|....|||.+.. .....+-...|+.+-+++     .|.|||+.++++..++++-|.||-+ |
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~L-----rHkNIVrYLGs~senGf~kIFMEqVPG  656 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTL-----RHKNIVRYLGSVSENGFFKIFMEQVPG  656 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHH-----hhHhHHHHhhccCCCCeEEEEeecCCC
Confidence            69999999999999999999999998863 334445566788888888     4477999999999999999999999 9


Q ss_pred             CCHHHHHHhcCCCCC--CHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccC
Q 013973          182 SSLYDFLRKNNYRSF--PIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM  259 (433)
Q Consensus       182 ~~L~~~l~~~~~~~l--~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~  259 (433)
                      |+|.++|+..- +++  .+..+.+|.+||+.||.|||++.|||||||-+||||+                          
T Consensus       657 GSLSsLLrskW-GPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvN--------------------------  709 (1226)
T KOG4279|consen  657 GSLSSLLRSKW-GPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVN--------------------------  709 (1226)
T ss_pred             CcHHHHHHhcc-CCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEe--------------------------
Confidence            99999998643 255  7888999999999999999999999999999999996                          


Q ss_pred             CCCCCEEEEecCCccc---cCCCCCceeecCcccchhhhhCC--CCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 013973          260 PKSSAIKVIDFGSTTY---ERPDQNYIVSTRHYRAPEVILGL--GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  334 (433)
Q Consensus       260 ~~~~~~kl~Dfg~a~~---~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~  334 (433)
                      ...+.+||+|||-++.   .++-..++.||..|||||++..+  +|++++|||||||++.||.||++||......+....
T Consensus       710 TySGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMF  789 (1226)
T KOG4279|consen  710 TYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMF  789 (1226)
T ss_pred             eccceEEecccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhh
Confidence            3445667777775542   22334567899999999999864  599999999999999999999999986554432211


Q ss_pred             HHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCC
Q 013973          335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  414 (433)
Q Consensus       335 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  414 (433)
                      -                        -|.+..-                      .+.+..++.+++.||.+|+..||.+|
T Consensus       790 k------------------------VGmyKvH----------------------P~iPeelsaeak~FilrcFepd~~~R  823 (1226)
T KOG4279|consen  790 K------------------------VGMYKVH----------------------PPIPEELSAEAKNFILRCFEPDPCDR  823 (1226)
T ss_pred             h------------------------hcceecC----------------------CCCcHHHHHHHHHHHHHHcCCCcccC
Confidence            1                        1111100                      11234678899999999999999999


Q ss_pred             CCHHHHhcCCCCCCCCC
Q 013973          415 LTAREALRHPFFTRDHL  431 (433)
Q Consensus       415 ~ta~ell~hp~f~~~~~  431 (433)
                      |+|.++|+.||++..++
T Consensus       824 ~sA~~LL~DpFlq~~~k  840 (1226)
T KOG4279|consen  824 PSAKDLLQDPFLQHNNK  840 (1226)
T ss_pred             ccHHHhccCcccccCCC
Confidence            99999999999998754

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=1.4e-41  Score=331.73  Aligned_cols=280  Identities=26%  Similarity=0.437  Sum_probs=205.9

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC----
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR----  170 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~----  170 (433)
                      .++|++.+.||.|+||.||+|.+..+++.||+|.+.... ...+....|+++++.+     .|++++++++.+...    
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l-----~h~~i~~~~~~~~~~~~~~   78 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRL-----DHDNIVKVYEVLGPSGSDL   78 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhc-----CCCcchhhHhhhccccccc
Confidence            468999999999999999999999999999999986432 3345567789999888     668899988766543    


Q ss_pred             ----------CeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCcccc
Q 013973          171 ----------NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKV  240 (433)
Q Consensus       171 ----------~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i  240 (433)
                                ...|+||||++++|.+++...   .+++..++.++.||+.||.|||+.||+||||||+||+++.+     
T Consensus        79 ~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~-----  150 (342)
T cd07854          79 TEDVGSLTELNSVYIVQEYMETDLANVLEQG---PLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTE-----  150 (342)
T ss_pred             ccccccccccceEEEEeecccccHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCC-----
Confidence                      468999999988999888643   68999999999999999999999999999999999999532     


Q ss_pred             CCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC------CCceeecCcccchhhhhC-CCCCCcchhHHHHHHH
Q 013973          241 PDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD------QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCIL  313 (433)
Q Consensus       241 ~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l  313 (433)
                                           +..++|+|||.+......      .....|+..|+|||++.+ ..++.++|+|||||++
T Consensus       151 ---------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil  209 (342)
T cd07854         151 ---------------------DLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIF  209 (342)
T ss_pred             ---------------------CceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHH
Confidence                                 234566666655432211      112357889999998765 5688999999999999


Q ss_pred             HHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcC
Q 013973          314 VELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD  393 (433)
Q Consensus       314 ~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (433)
                      |+|++|..||.+.+..+....+...........................  +..                 .........
T Consensus       210 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-----------------~~~~~~~~~  270 (342)
T cd07854         210 AEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDG--GEP-----------------RRPLRDLLP  270 (342)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcc--ccc-----------------CCCHHHHcc
Confidence            9999999999887776665555444333332221111111111100000  000                 000111223


Q ss_pred             CchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          394 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       394 ~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      ..+.++.+||.+||+.||++|||+.|++.||||+.
T Consensus       271 ~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~  305 (342)
T cd07854         271 GVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSC  305 (342)
T ss_pred             CCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccc
Confidence            56778999999999999999999999999999973

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=2.2e-41  Score=316.21  Aligned_cols=249  Identities=28%  Similarity=0.452  Sum_probs=203.9

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      +|++++.||.|+||.||.+.+..+++.+++|.+...   ......+..|+++++++     +|++++++++.+...+.++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~~~~~~~~~~~~~~   75 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLL-----QHPNIIAYYNHFMDDNTLL   75 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhC-----CCCCeeEEEeEEecCCeEE
Confidence            489999999999999999999999999999987632   33445677899999888     6788999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +||||+ +++|.+++.......+++..+..++.|++.||.|||+.|++|+||||+||+++.++                 
T Consensus        76 ~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~-----------------  138 (256)
T cd08221          76 IEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAG-----------------  138 (256)
T ss_pred             EEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCC-----------------
Confidence            999999 89999999876445789999999999999999999999999999999999996544                 


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                                .+||+|||.+.......   ....|++.|+|||++.+..++.++|+||||+++|+|++|..||...+..+
T Consensus       139 ----------~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~  208 (256)
T cd08221         139 ----------LIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN  208 (256)
T ss_pred             ----------CEEECcCcceEEcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH
Confidence                      45555555554332221   23468999999999998889999999999999999999999998766554


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+..  +..+                                              ......+.++.++|.+||+.|
T Consensus       209 ~~~~~~~--~~~~----------------------------------------------~~~~~~~~~~~~~i~~~l~~~  240 (256)
T cd08221         209 LVVKIVQ--GNYT----------------------------------------------PVVSVYSSELISLVHSLLQQD  240 (256)
T ss_pred             HHHHHHc--CCCC----------------------------------------------CCccccCHHHHHHHHHHcccC
Confidence            4433211  1000                                              001245678999999999999


Q ss_pred             CCCCCCHHHHhcCCCC
Q 013973          411 PTDRLTAREALRHPFF  426 (433)
Q Consensus       411 P~~R~ta~ell~hp~f  426 (433)
                      |.+||++.++++|||+
T Consensus       241 p~~R~s~~~ll~~~~l  256 (256)
T cd08221         241 PEKRPTADEVLDQPLL  256 (256)
T ss_pred             cccCCCHHHHhhCcCC
Confidence            9999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=1.3e-41  Score=326.32  Aligned_cols=253  Identities=21%  Similarity=0.300  Sum_probs=191.5

Q ss_pred             CcEEEEeeeeccccEEEEEEEECC----------------CCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCC
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRE----------------RKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGN  158 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~----------------~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~  158 (433)
                      ++|++.++||+|+||.||+|.+..                ++..||+|++...  ......+..|+.++..+     .|+
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~   79 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRL-----KDP   79 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhc-----CCC
Confidence            579999999999999999997532                3457999998742  23345677899999888     668


Q ss_pred             ceEEecceeecCCeEEEEEecC-CCCHHHHHHhcCC-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 013973          159 RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNY-----------------RSFPIDLVREIARQLLECIAFMHDLCM  220 (433)
Q Consensus       159 ~i~~~~~~~~~~~~~~lV~e~~-~~~L~~~l~~~~~-----------------~~l~~~~~~~i~~qi~~~L~~LH~~~i  220 (433)
                      ||+++++++...+..++||||+ +++|.+++.....                 ..+++..+..++.||+.||.|||+.||
T Consensus        80 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i  159 (304)
T cd05096          80 NIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNF  159 (304)
T ss_pred             CeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCc
Confidence            9999999999999999999999 8999999865321                 246788899999999999999999999


Q ss_pred             eeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhh
Q 013973          221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVI  295 (433)
Q Consensus       221 vHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~  295 (433)
                      +||||||+|||++.++.                           +||+|||++.......     ....++..|+|||++
T Consensus       160 vH~dlkp~Nill~~~~~---------------------------~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  212 (304)
T cd05096         160 VHRDLATRNCLVGENLT---------------------------IKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECI  212 (304)
T ss_pred             cccCcchhheEEcCCcc---------------------------EEECCCccceecccCceeEecCcCCCCccccCHHHH
Confidence            99999999999965554                           4555555444322111     122457889999999


Q ss_pred             hCCCCCCcchhHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchh
Q 013973          296 LGLGWTYPCDIWSVGCILVELCT--GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRE  373 (433)
Q Consensus       296 ~~~~~~~~~DvwSlGv~l~ellt--g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  373 (433)
                      .+..++.++|||||||++|||++  +..||...+..+....+........                  ...         
T Consensus       213 ~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~------------------~~~---------  265 (304)
T cd05096         213 LMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQG------------------RQV---------  265 (304)
T ss_pred             hcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhcc------------------ccc---------
Confidence            98899999999999999999987  5678877665444332221110000                  000         


Q ss_pred             hHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhc
Q 013973          374 SIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                                    ....++.++..+.+|+.+||+.||++|||+.||.+
T Consensus       266 --------------~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~  300 (304)
T cd05096         266 --------------YLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA  300 (304)
T ss_pred             --------------cccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence                          00112355678999999999999999999999943

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=2.8e-41  Score=328.22  Aligned_cols=288  Identities=26%  Similarity=0.432  Sum_probs=215.1

Q ss_pred             cEEEEeeeeccccEEEEEEEECCC--CeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee----
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRER--KEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD----  168 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~--~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~----  168 (433)
                      +|.+.+.||+|+||.||+|.+..+  ++.||+|.+...   .........|+.+++++.    +|++|+++++...    
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~----~h~~iv~~~~~~~~~~~   76 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFR----GHKNITCLYDMDIVFPG   76 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhc----CCCChheeeeeeeeccc
Confidence            488999999999999999999888  889999988632   122345667888888773    4578898887643    


Q ss_pred             cCCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          169 YRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       169 ~~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      ....+|++||+++++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++..
T Consensus        77 ~~~~~~~~~e~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~  154 (332)
T cd07857          77 NFNELYLYEELMEADLHQIIRSGQ--PLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARG  154 (332)
T ss_pred             cCCcEEEEEecccCCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCcee
Confidence            235688999999889999987543  799999999999999999999999999999999999997666655555555432


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                      .......                    .........||..|+|||++.+ ..++.++|+|||||++|+|++|.+||...+
T Consensus       155 ~~~~~~~--------------------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~  214 (332)
T cd07857         155 FSENPGE--------------------NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKD  214 (332)
T ss_pred             ccccccc--------------------ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCC
Confidence            2110000                    0001123468999999998876 568999999999999999999999999988


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ....+..+...+|..+.+....+............-..+.              .    .........+.++.+|+.+||
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~----~~~~~~~~~~~~~~~li~~~l  276 (332)
T cd07857         215 YVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPK--------------K----PFESIFPNANPLALDLLEKLL  276 (332)
T ss_pred             HHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCC--------------c----chHhhCCCCCHHHHHHHHHHc
Confidence            8888999999999888776555433221111000000000              0    001112345678999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCC
Q 013973          408 RYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       408 ~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      +.||++|||+.|++.||||+.-
T Consensus       277 ~~~P~~R~t~~~ll~~~~~~~~  298 (332)
T cd07857         277 AFDPTKRISVEEALEHPYLAIW  298 (332)
T ss_pred             cCCcccCCCHHHHhcChhhhhh
Confidence            9999999999999999999744

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=2.4e-41  Score=325.07  Aligned_cols=293  Identities=25%  Similarity=0.398  Sum_probs=216.3

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec---
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY---  169 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~---  169 (433)
                      .++|++.+.||+|+||.||+|.++.+++.||+|++....   ........|+++++.+     .|++|+++++.+..   
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~   81 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKL-----KHPNVVPLIDMAVERPD   81 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhc-----CCCCccchhhheecccc
Confidence            477999999999999999999999999999999885321   1223456788988888     56889999887643   


Q ss_pred             -----CCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCc
Q 013973          170 -----RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  244 (433)
Q Consensus       170 -----~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg  244 (433)
                           ...+++||||++++|.+.+.... ..+++..+..++.||+.||.|||++||+|+||||+|||+++++.++|+|||
T Consensus        82 ~~~~~~~~~~lv~~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg  160 (311)
T cd07866          82 KSKRKRGSVYMVTPYMDHDLSGLLENPS-VKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFG  160 (311)
T ss_pred             cccccCceEEEEEecCCcCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCc
Confidence                 34579999999888988887543 469999999999999999999999999999999999999888888888887


Q ss_pred             CCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCC
Q 013973          245 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALF  323 (433)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf  323 (433)
                      ++...........            .+.. ..........|++.|+|||++.+. .++.++|||||||++|||++|.+||
T Consensus       161 ~~~~~~~~~~~~~------------~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~  227 (311)
T cd07866         161 LARPYDGPPPNPK------------GGGG-GGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPIL  227 (311)
T ss_pred             cchhccCCCcccc------------cCCc-ccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCC
Confidence            7654432111000            0000 000111234688999999988764 5889999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      .+.+.......+....+.+++..+...............                   ..............+.++.+||
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~i  288 (311)
T cd07866         228 QGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSF-------------------TNYPRTLEERFGKLGPEGLDLL  288 (311)
T ss_pred             CCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccC-------------------CCCCccHHHHcccCChhHHHHH
Confidence            998888888888777777665443332211110000000                   0000011112234557899999


Q ss_pred             HhccccCCCCCCCHHHHhcCCCC
Q 013973          404 QGLLRYDPTDRLTAREALRHPFF  426 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~hp~f  426 (433)
                      .+||+.||++|||+.|++.||||
T Consensus       289 ~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         289 SKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             HHHcccCcccCcCHHHHhcCCCC
Confidence            99999999999999999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=6.9e-42  Score=323.86  Aligned_cols=250  Identities=25%  Similarity=0.423  Sum_probs=197.2

Q ss_pred             eeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecC
Q 013973          105 MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  180 (433)
Q Consensus       105 iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~  180 (433)
                      ||+|+||+||+|.+..+++.||+|++....    .....+..|+++++.+     +|++++.+++.+...+.+|+||||+
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~lv~e~~   75 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKV-----SSRFIVSLAYAFETKDDLCLVMTLM   75 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhC-----CCCCEeeeeeEEecCCeEEEEEecC
Confidence            699999999999999999999999986422    2233446788888887     5789999999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccC
Q 013973          181 -GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM  259 (433)
Q Consensus       181 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~  259 (433)
                       +++|.+++.......+++..+..++.|++.||.|||+.||+|+||||+||+++++                        
T Consensus        76 ~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~------------------------  131 (277)
T cd05577          76 NGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDH------------------------  131 (277)
T ss_pred             CCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCC------------------------
Confidence             8999999987655579999999999999999999999999999999999999544                        


Q ss_pred             CCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 013973          260 PKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER  337 (433)
Q Consensus       260 ~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~i~~  337 (433)
                         +.++|+|||.+.......  ....|+..|+|||++.+..++.++|+|||||++|+|++|..||...........+..
T Consensus       132 ---~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  208 (277)
T cd05577         132 ---GNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKR  208 (277)
T ss_pred             ---CCEEEccCcchhhhccCCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHh
Confidence               456666666554332211  223578899999999988899999999999999999999999976443111111100


Q ss_pred             HhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCC--
Q 013973          338 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL--  415 (433)
Q Consensus       338 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~--  415 (433)
                      .                   +..                          .....+..+++++.++|.+||+.||.+||  
T Consensus       209 ~-------------------~~~--------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~  243 (277)
T cd05577         209 R-------------------TLE--------------------------MAVEYPDKFSPEAKDLCEALLQKDPEKRLGC  243 (277)
T ss_pred             c-------------------ccc--------------------------ccccCCccCCHHHHHHHHHHccCChhHccCC
Confidence            0                   000                          00012235677899999999999999999  


Q ss_pred             ---CHHHHhcCCCCCCCCC
Q 013973          416 ---TAREALRHPFFTRDHL  431 (433)
Q Consensus       416 ---ta~ell~hp~f~~~~~  431 (433)
                         ++.+++.||||.+...
T Consensus       244 ~~~~~~~ll~h~~~~~~~~  262 (277)
T cd05577         244 RGGSADEVREHPLFKDLNW  262 (277)
T ss_pred             CcccHHHHHhChhhhcCCh
Confidence               8999999999987654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=1.8e-41  Score=324.79  Aligned_cols=281  Identities=29%  Similarity=0.484  Sum_probs=212.2

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      ...++|++.+.||+|+||.||+|.++.+++.||+|+++...   ........|+.+++.+     .|+|++++++++.+.
T Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l-----~h~~i~~~~~~~~~~   78 (302)
T cd07864           4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQL-----NHRNIVNLKEIVTDK   78 (302)
T ss_pred             hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhC-----CCCCeeeeeheecCc
Confidence            34577999999999999999999999999999999986422   2234456788888888     678999999888664


Q ss_pred             C----------eEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCcccc
Q 013973          171 N----------HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKV  240 (433)
Q Consensus       171 ~----------~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i  240 (433)
                      .          .+++||||++++|.+++.... ..+++..+..++.||+.||.|||+.||+|+||||+||++++++    
T Consensus        79 ~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~----  153 (302)
T cd07864          79 QDALDFKKDKGAFYLVFEYMDHDLMGLLESGL-VHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKG----  153 (302)
T ss_pred             chhhhccccCCcEEEEEcccCccHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC----
Confidence            4          899999999778888887642 4699999999999999999999999999999999999996554    


Q ss_pred             CCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCC-CCCCcchhHHHHHHHHH
Q 013973          241 PDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVE  315 (433)
Q Consensus       241 ~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~e  315 (433)
                                             .+||+|||.+.......    ....++..|+|||++.+. .++.++|||||||++|+
T Consensus       154 -----------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~e  210 (302)
T cd07864         154 -----------------------QIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGE  210 (302)
T ss_pred             -----------------------cEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHH
Confidence                                   45555555554322211    112467889999988754 57899999999999999


Q ss_pred             HHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCc
Q 013973          316 LCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS  395 (433)
Q Consensus       316 lltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (433)
                      |++|++||...+..+.+..+.+..+..+...++.+...........                   ..............+
T Consensus       211 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~  271 (302)
T cd07864         211 LFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKP-------------------KKQYRRRLREEFSFI  271 (302)
T ss_pred             HHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccccccccccc-------------------ccccccchhhhcCCC
Confidence            9999999998888888888887777665544332211110000000                   000001111122345


Q ss_pred             hhHHHHHHHhccccCCCCCCCHHHHhcCCCC
Q 013973          396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF  426 (433)
Q Consensus       396 ~~~~~~li~~~L~~dP~~R~ta~ell~hp~f  426 (433)
                      +..+.+||..||+.||.+||++.+++.||||
T Consensus       272 ~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         272 PTPALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence            7789999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=3.3e-41  Score=320.16  Aligned_cols=276  Identities=31%  Similarity=0.538  Sum_probs=209.2

Q ss_pred             EEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe---
Q 013973           99 YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH---  172 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~---  172 (433)
                      |++.+.||+|+||.||+|.++.+++.||+|.++...   ........|+.+++++..  ..|++++++++.+.....   
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~h~~i~~~~~~~~~~~~~~~   78 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLES--FEHPNIVRLLDVCHGPRTDRE   78 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhc--cCCCCcceEEEEEeeccCCCC
Confidence            678999999999999999999889999999986322   223345568888877743  247899999999987776   


Q ss_pred             --EEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          173 --ICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       173 --~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                        ++++|||++++|.+++.......+++..+..++.||+.||.|||+.+|+|+||||+||+++.                
T Consensus        79 ~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~----------------  142 (287)
T cd07838          79 LKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTS----------------  142 (287)
T ss_pred             ceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEcc----------------
Confidence              99999999779999988755446999999999999999999999999999999999999954                


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                                 ++.++|+|||.+.......  ....++..|+|||++.+..++.++|+|||||++|+|++|.+||.+.+.
T Consensus       143 -----------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~  211 (287)
T cd07838         143 -----------DGQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE  211 (287)
T ss_pred             -----------CCCEEEeccCcceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh
Confidence                       4566777777665432221  223578899999999998999999999999999999999999998887


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCcc-chhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      .+.+..+....+......                  |+.... ....+..     .............+..+.+||.+||
T Consensus       212 ~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~li~~~l  268 (287)
T cd07838         212 ADQLDKIFDVIGLPSEEE------------------WPRNVSLPRSSFPS-----YTPRSFKSFVPEICEEGLDLLKKML  268 (287)
T ss_pred             HHHHHHHHHHcCCCChHh------------------cCCCcccchhhccc-----ccccchhhhhhhhhHHHHHHHHHHh
Confidence            777766655544322111                  110000 0000000     0000001112345678899999999


Q ss_pred             ccCCCCCCCHHHHhcCCCC
Q 013973          408 RYDPTDRLTAREALRHPFF  426 (433)
Q Consensus       408 ~~dP~~R~ta~ell~hp~f  426 (433)
                      +.||.+||++.|+++||||
T Consensus       269 ~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         269 TFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             ccCCccCCCHHHHhcCcCC
Confidence            9999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=2.1e-41  Score=318.49  Aligned_cols=249  Identities=28%  Similarity=0.441  Sum_probs=193.9

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc------hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec-
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI------KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY-  169 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~-  169 (433)
                      .+|++.+.||+|+||.||+|.+..++..||+|.+...      ......+..|+.+++.+     .|++++++++.+.. 
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~   76 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNL-----QHERIVQYYGCLRDR   76 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHc-----CCCCeeeEEEEEEcC
Confidence            3589999999999999999999999999999988532      12334566788888888     66889999998765 


Q ss_pred             -CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC
Q 013973          170 -RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       170 -~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                       ...++++|||+ +++|.+++....  .+++.....++.|++.||+|||+.+|+|+||||+||+++.++.          
T Consensus        77 ~~~~~~l~~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~----------  144 (266)
T cd06651          77 AEKTLTIFMEYMPGGSVKDQLKAYG--ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGN----------  144 (266)
T ss_pred             CCCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCC----------
Confidence             46789999999 889999998654  6899999999999999999999999999999999999965544          


Q ss_pred             CCCCCCcccccCCCCCCEEEEecCCccccCC------CCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCC
Q 013973          248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERP------DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA  321 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~  321 (433)
                                       ++|+|||++.....      ......|+..|+|||++.+..++.++|+|||||++|||++|..
T Consensus       145 -----------------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~  207 (266)
T cd06651         145 -----------------VKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKP  207 (266)
T ss_pred             -----------------EEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCC
Confidence                             55555554432211      1112357889999999999889999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       322 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      ||...+.......+.. .+..                                              ...+...+..+.+
T Consensus       208 pf~~~~~~~~~~~~~~-~~~~----------------------------------------------~~~~~~~~~~~~~  240 (266)
T cd06651         208 PWAEYEAMAAIFKIAT-QPTN----------------------------------------------PQLPSHISEHARD  240 (266)
T ss_pred             CccccchHHHHHHHhc-CCCC----------------------------------------------CCCchhcCHHHHH
Confidence            9976543332221110 0000                                              0011234567888


Q ss_pred             HHHhccccCCCCCCCHHHHhcCCCCC
Q 013973          402 LLQGLLRYDPTDRLTAREALRHPFFT  427 (433)
Q Consensus       402 li~~~L~~dP~~R~ta~ell~hp~f~  427 (433)
                      |+ +||..||++||+++|+++||||+
T Consensus       241 li-~~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         241 FL-GCIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             HH-HHhcCChhhCcCHHHHhcCcccc
Confidence            88 57778999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=3.2e-41  Score=317.03  Aligned_cols=255  Identities=26%  Similarity=0.430  Sum_probs=195.7

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc------hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec-
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI------KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY-  169 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~-  169 (433)
                      .+|++.+.||+|+||.||+|.+..+++.||||.+...      ......+..|+.+++.+     .|++++++++.+.+ 
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~   76 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNL-----LHERIVQYYGCLRDP   76 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhc-----CCCCeeeEEeEeccC
Confidence            4699999999999999999999999999999988532      12234567788998888     67889999998865 


Q ss_pred             -CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC
Q 013973          170 -RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       170 -~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                       ...+++||||+ +++|.+++....  .+++..+..++.|++.||+|||+++|+|+||||+|||++.++.++|+|||.+.
T Consensus        77 ~~~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~  154 (265)
T cd06652          77 MERTLSIFMEHMPGGSIKDQLKSYG--ALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASK  154 (265)
T ss_pred             CCceEEEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccc
Confidence             35788999999 889999997654  68999999999999999999999999999999999999766655555555443


Q ss_pred             CCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                      ......                     ..........|+..|+|||++.+..++.++|+|||||++|+|++|+.||....
T Consensus       155 ~~~~~~---------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~  213 (265)
T cd06652         155 RLQTIC---------------------LSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFE  213 (265)
T ss_pred             cccccc---------------------ccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccc
Confidence            221000                     00001122468899999999998889999999999999999999999997654


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      .......+.   ....                  .                          ...+...+..+.++|.+||
T Consensus       214 ~~~~~~~~~---~~~~------------------~--------------------------~~~~~~~~~~~~~~i~~~l  246 (265)
T cd06652         214 AMAAIFKIA---TQPT------------------N--------------------------PVLPPHVSDHCRDFLKRIF  246 (265)
T ss_pred             hHHHHHHHh---cCCC------------------C--------------------------CCCchhhCHHHHHHHHHHh
Confidence            433222111   0000                  0                          0012234567889999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCC
Q 013973          408 RYDPTDRLTAREALRHPFFT  427 (433)
Q Consensus       408 ~~dP~~R~ta~ell~hp~f~  427 (433)
                      . +|++||+++|+++|||+.
T Consensus       247 ~-~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         247 V-EAKLRPSADELLRHTFVH  265 (265)
T ss_pred             c-ChhhCCCHHHHhcCcccC
Confidence            5 999999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=2e-41  Score=320.94  Aligned_cols=250  Identities=25%  Similarity=0.392  Sum_probs=190.6

Q ss_pred             eeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEec
Q 013973          104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEK  179 (433)
Q Consensus       104 ~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~  179 (433)
                      .||+|+||.||+|.+..+++.||+|++....    ........|..+++.+..  .+|++++.+.+.+...+.+|+||||
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~v~e~   78 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST--GDCPFIVCMSYAFHTPDKLSFILDL   78 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHh--CCCCcEeeeeeeeecCCEEEEEEec
Confidence            4899999999999999999999999986421    112223344444444433  2678999999999999999999999


Q ss_pred             C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCccccc
Q 013973          180 L-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKR  258 (433)
Q Consensus       180 ~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~  258 (433)
                      + |++|.+++...+  .+++..++.++.|++.||+|||+.+|+||||||+||+++.++                      
T Consensus        79 ~~g~~L~~~l~~~~--~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~----------------------  134 (278)
T cd05606          79 MNGGDLHYHLSQHG--VFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG----------------------  134 (278)
T ss_pred             CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCC----------------------
Confidence            9 899999987654  799999999999999999999999999999999999995544                      


Q ss_pred             CCCCCCEEEEecCCccccCC-CCCceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 013973          259 MPKSSAIKVIDFGSTTYERP-DQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME  336 (433)
Q Consensus       259 ~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~i~  336 (433)
                           .++|+|||.+..... ......||..|+|||++.+. .++.++|+||+||++|+|++|..||.............
T Consensus       135 -----~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~  209 (278)
T cd05606         135 -----HVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR  209 (278)
T ss_pred             -----CEEEccCcCccccCccCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHH
Confidence                 455566665543221 12234689999999999754 68999999999999999999999997653221111000


Q ss_pred             HHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCC-
Q 013973          337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL-  415 (433)
Q Consensus       337 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-  415 (433)
                      .                    ......                          ..+...+.++.+++.+||+.||.+|+ 
T Consensus       210 ~--------------------~~~~~~--------------------------~~~~~~s~~~~~li~~~l~~~p~~R~~  243 (278)
T cd05606         210 M--------------------TLTMAV--------------------------ELPDSFSPELRSLLEGLLQRDVNRRLG  243 (278)
T ss_pred             H--------------------hhccCC--------------------------CCCCcCCHHHHHHHHHHhhcCHHhccC
Confidence            0                    000000                          11234577899999999999999999 


Q ss_pred             ----CHHHHhcCCCCCCCC
Q 013973          416 ----TAREALRHPFFTRDH  430 (433)
Q Consensus       416 ----ta~ell~hp~f~~~~  430 (433)
                          ++.++++||||+...
T Consensus       244 ~~~~~~~~ll~~~~~~~~~  262 (278)
T cd05606         244 CLGRGAQEVKEHPFFRSLD  262 (278)
T ss_pred             CCCCCHHHHHhCccccCCC
Confidence                999999999998653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=1.3e-41  Score=320.37  Aligned_cols=249  Identities=25%  Similarity=0.399  Sum_probs=194.0

Q ss_pred             CcEEEEeee--eccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           97 SRYKIHSKM--GEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        97 ~~~~~~~~i--G~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ++|.+.+.+  |+|+||.||++.++.+++.+|+|++......    ..|..+...+.    +|++++++++.+...+.+|
T Consensus        14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~----~~e~~~~~~~~----~h~~iv~~~~~~~~~~~~~   85 (267)
T PHA03390         14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN----AIEPMVHQLMK----DNPNFIKLYYSVTTLKGHV   85 (267)
T ss_pred             HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc----hhhHHHHHHhh----cCCCEEEEEEEEecCCeeE
Confidence            457777766  9999999999999999999999998643211    11333222221    5789999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +||||+ +++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+||+++.++                 
T Consensus        86 iv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~-----------------  146 (267)
T PHA03390         86 LIMDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAK-----------------  146 (267)
T ss_pred             EEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCC-----------------
Confidence            999999 899999998764  799999999999999999999999999999999999995433                 


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH-H
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH-L  332 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~-~  332 (433)
                               ..++|+|||.+...... ....|+..|+|||++.+..++.++|+||||+++|+|++|..||........ .
T Consensus       147 ---------~~~~l~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~  216 (267)
T PHA03390        147 ---------DRIYLCDYGLCKIIGTP-SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDL  216 (267)
T ss_pred             ---------CeEEEecCccceecCCC-ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhH
Confidence                     15777777776544322 234689999999999998999999999999999999999999985443221 0


Q ss_pred             HHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCC
Q 013973          333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPT  412 (433)
Q Consensus       333 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  412 (433)
                      ..+....                    ..                          ....+...++.+.+||.+||+.||.
T Consensus       217 ~~~~~~~--------------------~~--------------------------~~~~~~~~~~~~~~li~~~l~~~p~  250 (267)
T PHA03390        217 ESLLKRQ--------------------QK--------------------------KLPFIKNVSKNANDFVQSMLKYNIN  250 (267)
T ss_pred             HHHHHhh--------------------cc--------------------------cCCcccccCHHHHHHHHHHhccChh
Confidence            1000000                    00                          0011235677899999999999999


Q ss_pred             CCCC-HHHHhcCCCCCC
Q 013973          413 DRLT-AREALRHPFFTR  428 (433)
Q Consensus       413 ~R~t-a~ell~hp~f~~  428 (433)
                      +|++ ++|+|+||||.+
T Consensus       251 ~R~~~~~~~l~h~~~~~  267 (267)
T PHA03390        251 YRLTNYNEIIKHPFLKI  267 (267)
T ss_pred             hCCchHHHHhcCCcccC
Confidence            9996 599999999974

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-42  Score=334.83  Aligned_cols=252  Identities=23%  Similarity=0.321  Sum_probs=197.7

Q ss_pred             ecCceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeec---chhhHHHHHHHHHHHHHHHhcCCCCCceEEecce
Q 013973           90 ALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  166 (433)
Q Consensus        90 ~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~  166 (433)
                      ..++...+.+.+...||+|.||+||+|++..+   ||||+++-   .....+.+..|+.++++-     .|.||+-+.++
T Consensus       385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whGd---VAVK~Lnv~~pt~~qlqaFKnEVa~lkkT-----RH~NIlLFMG~  456 (678)
T KOG0193|consen  385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHGD---VAVKLLNVDDPTPEQLQAFKNEVAVLKKT-----RHENILLFMGA  456 (678)
T ss_pred             cccccCHHHhhccceeccccccceeecccccc---eEEEEEecCCCCHHHHHHHHHHHHHHhhc-----chhhheeeehh
Confidence            44555667788999999999999999988654   99999973   344567788999999887     55789999999


Q ss_pred             eecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcC
Q 013973          167 FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  245 (433)
Q Consensus       167 ~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~  245 (433)
                      +..... .||..+| |.+|+.+|+... .+|.+...+.|+.||++|+.|||.++|||||||..||++.            
T Consensus       457 ~~~p~~-AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~------------  522 (678)
T KOG0193|consen  457 CMNPPL-AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLH------------  522 (678)
T ss_pred             hcCCce-eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEc------------
Confidence            988777 9999999 889999998765 5799999999999999999999999999999999999994            


Q ss_pred             CCCCCCCCcccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhC---CCCCCcchhHHHHHHHHHHH
Q 013973          246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILG---LGWTYPCDIWSVGCILVELC  317 (433)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGv~l~ell  317 (433)
                                     +++.|||+|||++.....-     .....|...|||||++..   .+|++.+||||||+++|||+
T Consensus       523 ---------------~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELl  587 (678)
T KOG0193|consen  523 ---------------EDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELL  587 (678)
T ss_pred             ---------------cCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHH
Confidence                           4466777777776532211     122357889999999974   36999999999999999999


Q ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchh
Q 013973          318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG  397 (433)
Q Consensus       318 tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  397 (433)
                      +|..||......+++-++-                       +|. -.|+                    .......++.
T Consensus       588 tg~lPysi~~~dqIifmVG-----------------------rG~-l~pd--------------------~s~~~s~~pk  623 (678)
T KOG0193|consen  588 TGELPYSIQNRDQIIFMVG-----------------------RGY-LMPD--------------------LSKIRSNCPK  623 (678)
T ss_pred             hCcCCcCCCChhheEEEec-----------------------ccc-cCcc--------------------chhhhccCHH
Confidence            9999999444333222111                       110 0000                    0011235677


Q ss_pred             HHHHHHHhccccCCCCCCCHHHHhc
Q 013973          398 DLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       398 ~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                      ++++|+..||..++++||...+||.
T Consensus       624 ~mk~Ll~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  624 AMKRLLSDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             HHHHHHHHHHhcCcccCccHHHHHH
Confidence            9999999999999999999988876

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=1.8e-41  Score=318.46  Aligned_cols=246  Identities=22%  Similarity=0.334  Sum_probs=198.3

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  176 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV  176 (433)
                      .+|.+.+.||+|+||.||+|.++.+++.||+|++.........+..|+++++.+     .|++++++++.+...+.+++|
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv   80 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-----KHPNLVQLLGVCTREPPFYII   80 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhC-----CCCChhheEEEEcCCCCcEEE
Confidence            459999999999999999999999999999999876555556678899999888     668899999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          177 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       177 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      |||+ +++|.+++.......+++..++.++.|++.||+|||++||+||||||+|||+++++.++                
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~k----------------  144 (263)
T cd05052          81 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVK----------------  144 (263)
T ss_pred             EEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEE----------------
Confidence            9999 89999999876555789999999999999999999999999999999999996655544                


Q ss_pred             cccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChHH
Q 013973          256 FKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  330 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~  330 (433)
                                 |+|||.+.......    ....++..|+|||.+.+..++.++|||||||++|||++ |..||.+.+..+
T Consensus       145 -----------l~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~  213 (263)
T cd05052         145 -----------VADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ  213 (263)
T ss_pred             -----------eCCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence                       45555443322111    11134567999999999899999999999999999998 999998765544


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+....                      .                          ...+...+.++.++|.+||+.|
T Consensus       214 ~~~~~~~~~----------------------~--------------------------~~~~~~~~~~~~~li~~cl~~~  245 (263)
T cd05052         214 VYELLEKGY----------------------R--------------------------MERPEGCPPKVYELMRACWQWN  245 (263)
T ss_pred             HHHHHHCCC----------------------C--------------------------CCCCCCCCHHHHHHHHHHccCC
Confidence            332221100                      0                          0112345678999999999999


Q ss_pred             CCCCCCHHHHhc
Q 013973          411 PTDRLTAREALR  422 (433)
Q Consensus       411 P~~R~ta~ell~  422 (433)
                      |++|||+.++++
T Consensus       246 p~~Rp~~~~l~~  257 (263)
T cd05052         246 PSDRPSFAEIHQ  257 (263)
T ss_pred             cccCCCHHHHHH
Confidence            999999999875

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=2.3e-41  Score=320.56  Aligned_cols=276  Identities=33%  Similarity=0.599  Sum_probs=217.1

Q ss_pred             EEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           99 YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      |++.+.||+|++|.||+|.+..+++.+|+|.++...   ........|+.+++.+     .|++++++++.+.....+++
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~~   75 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKEL-----NHPNIIKLLDVFRHKGDLYL   75 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHh-----cCCCcchHHHhhccCCCEEE
Confidence            567899999999999999999999999999986432   2345667788888888     56889999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          176 VFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       176 V~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      ||||+.++|.+++.... ..+++..+..++.||+.||.|||+.||+|+||||+||+++                      
T Consensus        76 v~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~----------------------  132 (283)
T cd05118          76 VFEFMDTDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLIN----------------------  132 (283)
T ss_pred             EEeccCCCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEEC----------------------
Confidence            99999779999887753 4799999999999999999999999999999999999994                      


Q ss_pred             cccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          256 FKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                           .++.++|+|||.+.......   ....++..|+|||.+.+. .++.++|+||||+++|+|++|..||...+..+.
T Consensus       133 -----~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~  207 (283)
T cd05118         133 -----TEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQ  207 (283)
T ss_pred             -----CCCcEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                 44567777777665443322   123578899999999876 789999999999999999999999998888877


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      +..+...++......+...........    ...+.....               ......+..+.++.+||.+||+.||
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~---------------~~~~~~~~~~~~~~~~i~~~l~~~P  268 (283)
T cd05118         208 LFKIFRTLGTPDPEVWPKFTSLARNYK----FSFPKKAGM---------------PLPKLFPNASPQALDLLSQMLHYDP  268 (283)
T ss_pred             HHHHHHHcCCCchHhcccchhhhhhhh----hhhcccccc---------------CHHHhhhhhCHHHHHHHHHHhccCc
Confidence            777777776665554444332211111    111110000               0011223567889999999999999


Q ss_pred             CCCCCHHHHhcCCCC
Q 013973          412 TDRLTAREALRHPFF  426 (433)
Q Consensus       412 ~~R~ta~ell~hp~f  426 (433)
                      .+||++.+++.||||
T Consensus       269 ~~Rp~~~~ll~~~~~  283 (283)
T cd05118         269 HKRITAEQALAHPYF  283 (283)
T ss_pred             ccCcCHHHHhhCCCC
Confidence            999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=3.7e-41  Score=319.47  Aligned_cols=278  Identities=32%  Similarity=0.559  Sum_probs=214.2

Q ss_pred             EEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh--hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEE
Q 013973           99 YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  176 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV  176 (433)
                      |++.+.||+|++|.||+|....+++.||||.+.....  .......|+..+.++.    +|++++.+++.+...+..++|
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~----~h~~i~~~~~~~~~~~~~~lv   76 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLN----EHPNIVKLKEVFRENDELYFV   76 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhcc----CCCCchhHHHHhhcCCcEEEE
Confidence            6788999999999999999999999999998864322  2223345777776662    368899999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCccc
Q 013973          177 FEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  256 (433)
Q Consensus       177 ~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~  256 (433)
                      |||++++|.+++.......+++..+..++.|++.||.|||++||+|+||||+||++++                      
T Consensus        77 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~----------------------  134 (283)
T cd07830          77 FEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSG----------------------  134 (283)
T ss_pred             EecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcC----------------------
Confidence            9999999999988765457899999999999999999999999999999999999954                      


Q ss_pred             ccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 013973          257 KRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA  333 (433)
Q Consensus       257 ~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~  333 (433)
                           ++.++|+|||.+.......  ....|+..|+|||++.+ ..++.++|+||||+++|+|++|.+||...+..+...
T Consensus       135 -----~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~  209 (283)
T cd07830         135 -----PEVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLY  209 (283)
T ss_pred             -----CCCEEEeecccceeccCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHH
Confidence                 4566777777665433221  23468889999998854 457899999999999999999999999988888888


Q ss_pred             HHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCC
Q 013973          334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  413 (433)
Q Consensus       334 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  413 (433)
                      .+...++..+...+.........    ....++....               ..........+.++.+||.+||+.||++
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~---------------~~~~~~~~~~~~~~~~li~~cl~~~p~~  270 (283)
T cd07830         210 KICSVLGTPTKQDWPEGYKLASK----LGFRFPQFAP---------------TSLHQLIPNASPEAIDLIKDMLRWDPKK  270 (283)
T ss_pred             HHHHhcCCCChhhhhhHhhhhcc----cccccccccc---------------ccHHHHcccCCHHHHHHHHHhcccCccc
Confidence            88888888776544332211111    0111111000               0001112233678999999999999999


Q ss_pred             CCCHHHHhcCCCC
Q 013973          414 RLTAREALRHPFF  426 (433)
Q Consensus       414 R~ta~ell~hp~f  426 (433)
                      |||+.|++.||||
T Consensus       271 Rpt~~ei~~~~~~  283 (283)
T cd07830         271 RPTASQALQHPYF  283 (283)
T ss_pred             CCCHHHHhhCCCC
Confidence            9999999999998

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=1.1e-41  Score=336.18  Aligned_cols=248  Identities=24%  Similarity=0.352  Sum_probs=190.2

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCC-----CeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRER-----KEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~-----~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      ++|++.+.||+|+||.||+|++...     ++.||+|+++..  ......+..|+.+++.+.    .|+||+++++.+..
T Consensus        38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~----~h~nIv~~~~~~~~  113 (374)
T cd05106          38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLG----QHKNIVNLLGACTH  113 (374)
T ss_pred             HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhc----cCCceeeEeeEecC
Confidence            4699999999999999999986443     357999999643  233455678999988773    46889999999999


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcC--------------------------------------------------------
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNN--------------------------------------------------------  192 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~--------------------------------------------------------  192 (433)
                      .+.+++||||+ +|+|.+++....                                                        
T Consensus       114 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (374)
T cd05106         114 GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQ  193 (374)
T ss_pred             CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccc
Confidence            99999999999 999999986431                                                        


Q ss_pred             ------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccCC
Q 013973          193 ------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP  260 (433)
Q Consensus       193 ------------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~  260 (433)
                                  ..++++..+..++.||+.||.|||++||+||||||+|||+++++                        
T Consensus       194 ~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~------------------------  249 (374)
T cd05106         194 SSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGR------------------------  249 (374)
T ss_pred             cccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCC------------------------
Confidence                        12478889999999999999999999999999999999996544                        


Q ss_pred             CCCCEEEEecCCccccCCCCC-----ceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 013973          261 KSSAIKVIDFGSTTYERPDQN-----YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAM  334 (433)
Q Consensus       261 ~~~~~kl~Dfg~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~~~~~  334 (433)
                         .+||+|||++........     ...++..|||||++.+..++.++|||||||++|||++ |..||...........
T Consensus       250 ---~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~  326 (374)
T cd05106         250 ---VAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYK  326 (374)
T ss_pred             ---eEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHH
Confidence               455555555543221111     1234567999999998899999999999999999997 9999976443222211


Q ss_pred             HHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCC
Q 013973          335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  414 (433)
Q Consensus       335 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  414 (433)
                      +...                      + ..                        ...+...++++.+++.+||+.||++|
T Consensus       327 ~~~~----------------------~-~~------------------------~~~~~~~~~~l~~li~~cl~~dp~~R  359 (374)
T cd05106         327 MVKR----------------------G-YQ------------------------MSRPDFAPPEIYSIMKMCWNLEPTER  359 (374)
T ss_pred             HHHc----------------------c-cC------------------------ccCCCCCCHHHHHHHHHHcCCChhhC
Confidence            1110                      0 00                        00112346789999999999999999


Q ss_pred             CCHHHHhc
Q 013973          415 LTAREALR  422 (433)
Q Consensus       415 ~ta~ell~  422 (433)
                      ||+.++++
T Consensus       360 Ps~~~l~~  367 (374)
T cd05106         360 PTFSQISQ  367 (374)
T ss_pred             cCHHHHHH
Confidence            99999875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=1.8e-41  Score=319.15  Aligned_cols=249  Identities=20%  Similarity=0.269  Sum_probs=192.9

Q ss_pred             CcEEEEeeeeccccEEEEEEEEC---CCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDR---ERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~---~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .+|++.+.||+|+||.||+|.++   ..+..||+|+++..  ......+..|+.++.++     .|+|++++++.+...+
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~   79 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQF-----DHSNIVRLEGVITRGN   79 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcC-----CCCCcCeEEEEEecCC
Confidence            56999999999999999999875   45678999998743  23345567788888777     6789999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      ..++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.++++|||.+....
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~  158 (266)
T cd05064          80 TMMIVTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDK  158 (266)
T ss_pred             CcEEEEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCccccccc
Confidence            999999999 889999997643 368999999999999999999999999999999999999766655555555332110


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChH
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  329 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~  329 (433)
                      ...                       ........++..|+|||++.+..++.++|||||||++||+++ |..||...+..
T Consensus       159 ~~~-----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~  215 (266)
T cd05064         159 SEA-----------------------IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ  215 (266)
T ss_pred             ccc-----------------------hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH
Confidence            000                       000011235678999999999999999999999999999775 99999876655


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +....+.....                        .                        ..+..++..+.+++.+||+.
T Consensus       216 ~~~~~~~~~~~------------------------~------------------------~~~~~~~~~~~~li~~c~~~  247 (266)
T cd05064         216 DVIKAVEDGFR------------------------L------------------------PAPRNCPNLLHQLMLDCWQK  247 (266)
T ss_pred             HHHHHHHCCCC------------------------C------------------------CCCCCCCHHHHHHHHHHcCC
Confidence            44333211000                        0                        01234567899999999999


Q ss_pred             CCCCCCCHHHHhc
Q 013973          410 DPTDRLTAREALR  422 (433)
Q Consensus       410 dP~~R~ta~ell~  422 (433)
                      ||++||++.|+++
T Consensus       248 ~p~~RP~~~~i~~  260 (266)
T cd05064         248 ERGERPRFSQIHS  260 (266)
T ss_pred             CchhCCCHHHHHH
Confidence            9999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=1.4e-41  Score=321.75  Aligned_cols=252  Identities=27%  Similarity=0.427  Sum_probs=201.9

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ..|+.++.||.|+||.||+|.+..+++.||+|++...  ......+..|+.+++.+     .|++++++++.+.+...+|
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~   78 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC-----DSPYVTKYYGSYLKGTKLW   78 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEEECCEEE
Confidence            3588899999999999999999999999999998743  23345566788888777     6789999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +||||+ +++|.+++...   .+++..+..++.|++.||+|||+.+++|+||+|+||+++.++                 
T Consensus        79 lv~e~~~~~~L~~~i~~~---~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~-----------------  138 (277)
T cd06640          79 IIMEYLGGGSALDLLRAG---PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQG-----------------  138 (277)
T ss_pred             EEEecCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCC-----------------
Confidence            999999 88999998753   589999999999999999999999999999999999996554                 


Q ss_pred             cccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                                .++|+|||.+......   .....++..|+|||++.+..++.++|+|||||++|||++|..||...+...
T Consensus       139 ----------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~  208 (277)
T cd06640         139 ----------DVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR  208 (277)
T ss_pred             ----------CEEEcccccceeccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh
Confidence                      4555555555332221   122367889999999998889999999999999999999999998655433


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+..                       +.   +                      ......++.++.+|+.+||+.|
T Consensus       209 ~~~~~~~-----------------------~~---~----------------------~~~~~~~~~~~~~li~~~l~~~  240 (277)
T cd06640         209 VLFLIPK-----------------------NN---P----------------------PTLTGEFSKPFKEFIDACLNKD  240 (277)
T ss_pred             Hhhhhhc-----------------------CC---C----------------------CCCchhhhHHHHHHHHHHcccC
Confidence            2221100                       00   0                      0011234667899999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCCCC
Q 013973          411 PTDRLTAREALRHPFFTRDHL  431 (433)
Q Consensus       411 P~~R~ta~ell~hp~f~~~~~  431 (433)
                      |++||++.++++|+||.+...
T Consensus       241 p~~Rp~~~~il~~~~~~~~~~  261 (277)
T cd06640         241 PSFRPTAKELLKHKFIVKNAK  261 (277)
T ss_pred             cccCcCHHHHHhChHhhhcch
Confidence            999999999999999987654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.7e-42  Score=338.11  Aligned_cols=249  Identities=22%  Similarity=0.395  Sum_probs=208.9

Q ss_pred             EEEeeeeccccEEEEEEEECCCCeEEEEEEee-----cchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe--
Q 013973          100 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR-----GIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH--  172 (433)
Q Consensus       100 ~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~-----~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~--  172 (433)
                      +...+||+|+|-+||+|.|..+|..||.-.++     +.....+++..|+.+|+.|     .|+||++++.+|.+...  
T Consensus        43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL-----~H~NIirfy~SW~d~~n~~  117 (632)
T KOG0584|consen   43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSL-----KHPNIIRFYDSWVDTDNKT  117 (632)
T ss_pred             ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccC-----CCCceeeeeeheecCCCce
Confidence            56689999999999999999999999876554     2234457788999999998     78999999999987654  


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC--MIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      +.+|+|.+ .|+|..|+.+.+  ++....++.|++||+.||.|||++.  |||||||.+||+|+                
T Consensus       118 in~iTEL~TSGtLr~Y~kk~~--~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFin----------------  179 (632)
T KOG0584|consen  118 INFITELFTSGTLREYRKKHR--RVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVN----------------  179 (632)
T ss_pred             eeeeeecccCCcHHHHHHHhc--cCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEc----------------
Confidence            88999999 999999998865  8999999999999999999999986  99999999999996                


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCC-CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                                ...+.|||+|+|+|+...... ..++|||.|||||+.. +.|+..+||||||.+|+||+|+.+||..+..
T Consensus       180 ----------G~~G~VKIGDLGLAtl~r~s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n  248 (632)
T KOG0584|consen  180 ----------GNLGEVKIGDLGLATLLRKSHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTN  248 (632)
T ss_pred             ----------CCcCceeecchhHHHHhhccccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCC
Confidence                      567899999999998766554 4468999999999987 7899999999999999999999999998877


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      ..++..  +......+..+.                                            ..-.+++++||.+||.
T Consensus       249 ~AQIYK--KV~SGiKP~sl~--------------------------------------------kV~dPevr~fIekCl~  282 (632)
T KOG0584|consen  249 PAQIYK--KVTSGIKPAALS--------------------------------------------KVKDPEVREFIEKCLA  282 (632)
T ss_pred             HHHHHH--HHHcCCCHHHhh--------------------------------------------ccCCHHHHHHHHHHhc
Confidence            655432  111111111111                                            1224689999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCC
Q 013973          409 YDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       409 ~dP~~R~ta~ell~hp~f~~~  429 (433)
                      . .+.|+||.|+|.||||..+
T Consensus       283 ~-~~~R~sa~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  283 T-KSERLSAKELLKDPFFDED  302 (632)
T ss_pred             C-chhccCHHHHhhChhhccc
Confidence            9 9999999999999999986

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=3.2e-41  Score=320.09  Aligned_cols=276  Identities=29%  Similarity=0.489  Sum_probs=211.8

Q ss_pred             EEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC--CeE
Q 013973           99 YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR--NHI  173 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~--~~~  173 (433)
                      |++.+.||+|+||.||+|.+..+++.||+|.+...   ......+..|+.+++.+     .|++++++++.+...  +..
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~~   75 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKL-----RHPNIVRLKEIVTSKGKGSI   75 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhc-----cCCCeeeheeeEecCCCCcE
Confidence            67899999999999999999999999999999754   23344567789999888     578899999999887  899


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       174 ~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      ++||||++++|.+++.... ..+++..+..++.||+.||+|||+.|++|+||||+||++++++                 
T Consensus        76 ~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~-----------------  137 (287)
T cd07840          76 YMVFEYMDHDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDG-----------------  137 (287)
T ss_pred             EEEeccccccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCC-----------------
Confidence            9999999779999887653 4799999999999999999999999999999999999995544                 


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                                .++|+|||.+.......    ....++..|+|||.+.+ ..++.++||||||+++|||++|..||...+.
T Consensus       138 ----------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~  207 (287)
T cd07840         138 ----------VLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTE  207 (287)
T ss_pred             ----------CEEEccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence                      45555555554332221    22356888999998765 4578999999999999999999999998888


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCC-chhHHHHHHHhcc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH-SAGDLTHLLQGLL  407 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L  407 (433)
                      ...+..+....+..+...+........  .......                 ............. ++.++.++|.+||
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~i~~~l  268 (287)
T cd07840         208 LEQLEKIFELCGSPTDENWPGVSKLPW--FENLKPK-----------------KPYKRRLREFFKHLIDPSALDLLDKLL  268 (287)
T ss_pred             HHHHHHHHHHhCCCchhhccccccchh--hhhcccc-----------------ccchhHHHHHhcccCCHHHHHHHHHHc
Confidence            877777777776665443332211100  0000000                 0000111111222 4788999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCC
Q 013973          408 RYDPTDRLTAREALRHPFF  426 (433)
Q Consensus       408 ~~dP~~R~ta~ell~hp~f  426 (433)
                      +.||.+||++.++++||||
T Consensus       269 ~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         269 TLDPKKRISADQALQHEYF  287 (287)
T ss_pred             CCChhhCcCHHHHhhCcCC
Confidence            9999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=7e-42  Score=326.49  Aligned_cols=252  Identities=26%  Similarity=0.435  Sum_probs=200.9

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      +.|.....||+|+||.||++.+..+++.||||.+.... ...+.+..|+.+++.+     .|++++++++.+...+..|+
T Consensus        22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-----~h~~ii~~~~~~~~~~~~~l   96 (292)
T cd06658          22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDY-----HHENVVDMYNSYLVGDELWV   96 (292)
T ss_pred             HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhC-----CCCcHHHHHHheecCCeEEE
Confidence            44666788999999999999999999999999986432 3345567788888877     67899999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      ||||+ +++|.+++...   .+++..+..++.||+.||.|||++||+||||||+||+++++                   
T Consensus        97 v~e~~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~-------------------  154 (292)
T cd06658          97 VMEFLEGGALTDIVTHT---RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSD-------------------  154 (292)
T ss_pred             EEeCCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCC-------------------
Confidence            99999 88999988543   58999999999999999999999999999999999999544                   


Q ss_pred             ccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                              +.++|+|||++......   .....|+..|+|||++.+..++.++|+||||+++|||++|..||...+..+.
T Consensus       155 --------~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~  226 (292)
T cd06658         155 --------GRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA  226 (292)
T ss_pred             --------CCEEEccCcchhhcccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                    45666666655432211   1234689999999999988899999999999999999999999987655443


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      +..+........                                              ......+..+.+||.+||+.||
T Consensus       227 ~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~li~~~l~~~P  260 (292)
T cd06658         227 MRRIRDNLPPRV----------------------------------------------KDSHKVSSVLRGFLDLMLVREP  260 (292)
T ss_pred             HHHHHhcCCCcc----------------------------------------------ccccccCHHHHHHHHHHccCCh
Confidence            332221111000                                              0011345678999999999999


Q ss_pred             CCCCCHHHHhcCCCCCCC
Q 013973          412 TDRLTAREALRHPFFTRD  429 (433)
Q Consensus       412 ~~R~ta~ell~hp~f~~~  429 (433)
                      .+|||+.|+++||||...
T Consensus       261 ~~Rpt~~~il~~~~~~~~  278 (292)
T cd06658         261 SQRATAQELLQHPFLKLA  278 (292)
T ss_pred             hHCcCHHHHhhChhhhcc
Confidence            999999999999999854

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.1e-41  Score=315.29  Aligned_cols=252  Identities=26%  Similarity=0.418  Sum_probs=201.3

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      ++|++.+.||.|+||.||+|.+..+++.+|+|++.... .....+..|+.+++.+     +|++++++++.+...+.+|+
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~~~~~~~~~~~~~~l   77 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKEC-----RHPNIVAYFGSYLRRDKLWI   77 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhC-----CCCChhceEEEEEeCCEEEE
Confidence            56999999999999999999999999999999987432 2345677888888888     77899999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      ||||+ +++|.+++.... ..+++..+..++.|++.||.|||+.||+|+||||+||++++++                  
T Consensus        78 ~~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~------------------  138 (262)
T cd06613          78 VMEYCGGGSLQDIYQVTR-GPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDG------------------  138 (262)
T ss_pred             EEeCCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCC------------------
Confidence            99999 789999987652 3799999999999999999999999999999999999995544                  


Q ss_pred             ccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCC---CCCCcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                               .++|+|||.+......   .....|+..|+|||.+.+.   .++.++|+||||+++|+|++|.+||...+.
T Consensus       139 ---------~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~  209 (262)
T cd06613         139 ---------DVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHP  209 (262)
T ss_pred             ---------CEEECccccchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCH
Confidence                     4566666655433221   1234688899999999877   789999999999999999999999987665


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      .+....+....                       +..+.                     .......+.++.+||.+||+
T Consensus       210 ~~~~~~~~~~~-----------------------~~~~~---------------------~~~~~~~~~~~~~li~~~l~  245 (262)
T cd06613         210 MRALFLISKSN-----------------------FPPPK---------------------LKDKEKWSPVFHDFIKKCLT  245 (262)
T ss_pred             HHHHHHHHhcc-----------------------CCCcc---------------------ccchhhhhHHHHHHHHHHcC
Confidence            44332221100                       00000                     00011345678999999999


Q ss_pred             cCCCCCCCHHHHhcCCC
Q 013973          409 YDPTDRLTAREALRHPF  425 (433)
Q Consensus       409 ~dP~~R~ta~ell~hp~  425 (433)
                      .||.+|||+.+++.|+|
T Consensus       246 ~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         246 KDPKKRPTATKLLQHPF  262 (262)
T ss_pred             CChhhCCCHHHHhcCCC
Confidence            99999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=3.4e-41  Score=314.93  Aligned_cols=246  Identities=26%  Similarity=0.410  Sum_probs=198.1

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      +|++.+.||+|+||.||++.+..+++.||+|.++..  ....+....|+.+++.+     .|+|++++.+.+.+.+.+|+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~l   75 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKM-----KHPNIVAFKESFEADGHLYI   75 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhC-----CCCCcceEEEEEEECCEEEE
Confidence            489999999999999999999999999999998632  23445566788888777     66889999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      ||||+ +++|.+++.......+++..+..++.||+.||.|||++||+|+||||+||++++++                  
T Consensus        76 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~------------------  137 (255)
T cd08219          76 VMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNG------------------  137 (255)
T ss_pred             EEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCC------------------
Confidence            99999 89999998765555789999999999999999999999999999999999995544                  


Q ss_pred             ccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                               .++|+|||.+.......   ....|+..|+|||++.+..++.++|+||||+++|+|++|..||...+....
T Consensus       138 ---------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~  208 (255)
T cd08219         138 ---------KVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL  208 (255)
T ss_pred             ---------cEEEcccCcceeecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH
Confidence                     45566666554332211   234688999999999998899999999999999999999999987554433


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      ...+..                       +...                         ..+..++.++.+||.+||+.||
T Consensus       209 ~~~~~~-----------------------~~~~-------------------------~~~~~~~~~~~~li~~~l~~~P  240 (255)
T cd08219         209 ILKVCQ-----------------------GSYK-------------------------PLPSHYSYELRSLIKQMFKRNP  240 (255)
T ss_pred             HHHHhc-----------------------CCCC-------------------------CCCcccCHHHHHHHHHHHhCCc
Confidence            322111                       0000                         0112355678999999999999


Q ss_pred             CCCCCHHHHhcC
Q 013973          412 TDRLTAREALRH  423 (433)
Q Consensus       412 ~~R~ta~ell~h  423 (433)
                      ++|||+.+++.-
T Consensus       241 ~~Rp~~~~il~~  252 (255)
T cd08219         241 RSRPSATTILSR  252 (255)
T ss_pred             ccCCCHHHHhhc
Confidence            999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=2.8e-41  Score=318.56  Aligned_cols=252  Identities=28%  Similarity=0.431  Sum_probs=196.3

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh-----------hHHHHHHHHHHHHHHHhcCCCCCceEEecce
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-----------YREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  166 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-----------~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~  166 (433)
                      +|.+.+.||+|+||.||+|.+..+++.||+|.++....           ..+.+..|+.+++.+     .|+++++++++
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~   76 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL-----DHLNIVQYLGF   76 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhc-----CCCCcceEEEE
Confidence            48889999999999999999999999999998752111           123456688888877     67889999999


Q ss_pred             eecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcC
Q 013973          167 FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  245 (433)
Q Consensus       167 ~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~  245 (433)
                      +...+.+++||||+ +++|.+++...+  .+++..+..++.||+.||.|||++|++|+||||+||+++.++         
T Consensus        77 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~---------  145 (272)
T cd06629          77 ETTEEYLSIFLEYVPGGSIGSCLRTYG--RFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADG---------  145 (272)
T ss_pred             eccCCceEEEEecCCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCC---------
Confidence            99999999999999 999999998764  799999999999999999999999999999999999995544         


Q ss_pred             CCCCCCCCcccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhCCC--CCCcchhHHHHHHHHHHHh
Q 013973          246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLG--WTYPCDIWSVGCILVELCT  318 (433)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGv~l~ellt  318 (433)
                                        .++|+|||.+......     .....|+..|+|||++....  ++.++|+||||+++|+|++
T Consensus       146 ------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~  207 (272)
T cd06629         146 ------------------ICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFA  207 (272)
T ss_pred             ------------------eEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHh
Confidence                              4555666555432211     12246889999999988754  8899999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhH
Q 013973          319 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  398 (433)
Q Consensus       319 g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (433)
                      |..||...+..+....+...                     ......+.                      .....++.+
T Consensus       208 g~~p~~~~~~~~~~~~~~~~---------------------~~~~~~~~----------------------~~~~~~~~~  244 (272)
T cd06629         208 GRRPWSDEEAIAAMFKLGNK---------------------RSAPPIPP----------------------DVSMNLSPV  244 (272)
T ss_pred             CCCCCcCcchHHHHHHhhcc---------------------ccCCcCCc----------------------cccccCCHH
Confidence            99999754443322111000                     00000000                      011245678


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhcCCCC
Q 013973          399 LTHLLQGLLRYDPTDRLTAREALRHPFF  426 (433)
Q Consensus       399 ~~~li~~~L~~dP~~R~ta~ell~hp~f  426 (433)
                      +.+||.+||+.||++|||++++|+||||
T Consensus       245 ~~~li~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         245 ALDFLNACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             HHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence            9999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-43  Score=336.83  Aligned_cols=252  Identities=26%  Similarity=0.411  Sum_probs=216.1

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      ..+++++..||-||||.|=++..+.....+|+|++++.    .+..+-...|..+|..+     ..+.||++|..|.+..
T Consensus       419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~-----~s~fIvrLYrTfrd~k  493 (732)
T KOG0614|consen  419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMEC-----RSDFIVRLYRTFRDSK  493 (732)
T ss_pred             hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhc-----CchHHHHHHHHhccch
Confidence            45788999999999999999987766666999999753    23344455688888777     5689999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      ++|++||-| ||.|...|+.++  .|+...+++|+..++.|++|||++|||+|||||+|+|++                 
T Consensus       494 yvYmLmEaClGGElWTiLrdRg--~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd-----------------  554 (732)
T KOG0614|consen  494 YVYMLMEACLGGELWTILRDRG--SFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLD-----------------  554 (732)
T ss_pred             hhhhhHHhhcCchhhhhhhhcC--CcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeec-----------------
Confidence            999999998 999999999876  899999999999999999999999999999999999994                 


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                                .++-+||.|||+|.......  .++||||.|.|||++++...+.++|.||||+++|||++|.+||.+.+.
T Consensus       555 ----------~~Gy~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dp  624 (732)
T KOG0614|consen  555 ----------NRGYLKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDP  624 (732)
T ss_pred             ----------cCCceEEeehhhHHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCch
Confidence                      45567777888887665544  458999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      +.++..|.+.+.-                                               ..+|..++..+.+||+++-.
T Consensus       625 mktYn~ILkGid~-----------------------------------------------i~~Pr~I~k~a~~Lik~LCr  657 (732)
T KOG0614|consen  625 MKTYNLILKGIDK-----------------------------------------------IEFPRRITKTATDLIKKLCR  657 (732)
T ss_pred             HHHHHHHHhhhhh-----------------------------------------------hhcccccchhHHHHHHHHHh
Confidence            8888776553211                                               12344667789999999999


Q ss_pred             cCCCCCCC-----HHHHhcCCCCCC
Q 013973          409 YDPTDRLT-----AREALRHPFFTR  428 (433)
Q Consensus       409 ~dP~~R~t-----a~ell~hp~f~~  428 (433)
                      .+|.+|+.     +.++.+|.||..
T Consensus       658 ~~P~ERLG~~~~gI~DIkkH~Wf~g  682 (732)
T KOG0614|consen  658 DNPTERLGYQKGGINDIKKHRWFEG  682 (732)
T ss_pred             cCcHhhhccccCChHHHHhhhhhhc
Confidence            99999996     899999999975

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=2.8e-41  Score=319.31  Aligned_cols=271  Identities=27%  Similarity=0.402  Sum_probs=210.0

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++...    .........|.++++++.    +|++|+++++.+...+.
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~----~~~~i~~~~~~~~~~~~   76 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLN----GHPGIIKLYYTFQDEEN   76 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcc----cCCCchhHHHHhcCCce
Confidence            3699999999999999999999999999999998642    222345667778877773    37899999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +++|||++ +++|.+++.+.+  .+++..+..++.|++.||.|||+.|++|+||||+||+++.++.++++|||++.....
T Consensus        77 ~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~  154 (280)
T cd05581          77 LYFVLEYAPNGELLQYIRKYG--SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDP  154 (280)
T ss_pred             EEEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence            99999999 999999998764  799999999999999999999999999999999999998888888888887765433


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                      .......    ......++..............|+..|+|||++.+..++.++|+||||+++|++++|..||...+....
T Consensus       155 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~  230 (280)
T cd05581         155 NSSPESN----KGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLT  230 (280)
T ss_pred             ccccccC----CCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence            2211000    000001111111111112334688999999999988899999999999999999999999987664433


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      +..+...                       ..                          ..+..++..+.+||.+||+.||
T Consensus       231 ~~~~~~~-----------------------~~--------------------------~~~~~~~~~~~~li~~~l~~~p  261 (280)
T cd05581         231 FQKILKL-----------------------EY--------------------------SFPPNFPPDAKDLIEKLLVLDP  261 (280)
T ss_pred             HHHHHhc-----------------------CC--------------------------CCCCccCHHHHHHHHHHhcCCH
Confidence            3222110                       00                          1123456789999999999999


Q ss_pred             CCCCCH----HHHhcCCCC
Q 013973          412 TDRLTA----REALRHPFF  426 (433)
Q Consensus       412 ~~R~ta----~ell~hp~f  426 (433)
                      ++||++    .|+++||||
T Consensus       262 ~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         262 QDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             hhCCCcccCHHHHhcCCCC
Confidence            999999    999999998

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=4.8e-41  Score=313.88  Aligned_cols=248  Identities=29%  Similarity=0.455  Sum_probs=198.8

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch------hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      +|+..+.||+|+||.||+|.+..+++.||+|.+....      ...+.+..|+.+++.+     .|++++++++.+....
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~~~~~~~~~~~   75 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKL-----QHPNIVQYLGTEREED   75 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhc-----CCCCchheeeeEecCC
Confidence            4778899999999999999999899999999886422      2345667788888877     6788999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+++||||+ +++|.+++....  .+++..+..++.||+.||.|||+.||+|+||||+||+++.++              
T Consensus        76 ~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~--------------  139 (258)
T cd06632          76 NLYIFLELVPGGSLAKLLKKYG--SFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNG--------------  139 (258)
T ss_pred             eEEEEEEecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--------------
Confidence            999999999 889999998754  689999999999999999999999999999999999995544              


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCC--CCceeecCcccchhhhhCCC-CCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                                   .+||+|||.+......  .....|+..|+|||.+.... ++.++|+|||||++|+|++|..||....
T Consensus       140 -------------~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~  206 (258)
T cd06632         140 -------------VVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE  206 (258)
T ss_pred             -------------CEEEccCccceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc
Confidence                         5566666655432221  12346889999999998776 8999999999999999999999997655


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ..+....+... ...                                              ...+..++.++.+|+.+||
T Consensus       207 ~~~~~~~~~~~-~~~----------------------------------------------~~~~~~~~~~~~~li~~~l  239 (258)
T cd06632         207 GVAAVFKIGRS-KEL----------------------------------------------PPIPDHLSDEAKDFILKCL  239 (258)
T ss_pred             HHHHHHHHHhc-ccC----------------------------------------------CCcCCCcCHHHHHHHHHHh
Confidence            33322211110 000                                              0112345678999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCC
Q 013973          408 RYDPTDRLTAREALRHPFF  426 (433)
Q Consensus       408 ~~dP~~R~ta~ell~hp~f  426 (433)
                      +.||.+||++.+++.|||+
T Consensus       240 ~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         240 QRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             hcCcccCcCHHHHhcCCCC
Confidence            9999999999999999997

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=2e-41  Score=321.88  Aligned_cols=263  Identities=24%  Similarity=0.365  Sum_probs=202.3

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ++|++++.||+|+||+||+|.+..+++.||+|++...  ......+..|+++++.+     +|++++++++.+...+.++
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~   79 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHEC-----RSPYIVSFYGAFLNENNIC   79 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHc-----CCCCcceEeeeEecCCEEE
Confidence            5689999999999999999999999999999988633  23456677899988887     6789999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      +||||+ +++|.+++...+  .+++..+..++.|++.||.|||+ .+|+||||||+||+++++                 
T Consensus        80 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~-----------------  140 (284)
T cd06620          80 MCMEFMDCGSLDRIYKKGG--PIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSR-----------------  140 (284)
T ss_pred             EEEecCCCCCHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCC-----------------
Confidence            999999 889999987654  68999999999999999999997 689999999999999544                 


Q ss_pred             CcccccCCCCCCEEEEecCCccccC-CCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYER-PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                                +.++|+|||++.... ......+||..|+|||++.+..++.++|+|||||++|+|++|..||......+.
T Consensus       141 ----------~~~~l~d~gl~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~  210 (284)
T cd06620         141 ----------GQIKLCDFGVSGELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDD  210 (284)
T ss_pred             ----------CcEEEccCCcccchhhhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhh
Confidence                      456666666654321 112335789999999999888899999999999999999999999986443211


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      ..       ..+..+..    .....+.......                         ....++.++.+|+.+||+.||
T Consensus       211 ~~-------~~~~~~~~----~~~~~~~~~~~~~-------------------------~~~~~~~~~~~li~~~l~~dp  254 (284)
T cd06620         211 GQ-------DDPMGILD----LLQQIVQEPPPRL-------------------------PSSDFPEDLRDFVDACLLKDP  254 (284)
T ss_pred             hh-------hhhhHHHH----HHHHHhhccCCCC-------------------------CchhcCHHHHHHHHHHhcCCc
Confidence            00       00000000    0000000000000                         001256689999999999999


Q ss_pred             CCCCCHHHHhcCCCCCCC
Q 013973          412 TDRLTAREALRHPFFTRD  429 (433)
Q Consensus       412 ~~R~ta~ell~hp~f~~~  429 (433)
                      ++|||+.|+++|+||.+.
T Consensus       255 ~~Rpt~~e~~~~~~~~~~  272 (284)
T cd06620         255 TERPTPQQLCAMPPFIQA  272 (284)
T ss_pred             ccCcCHHHHhcCcccccc
Confidence            999999999999999664

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=3.9e-41  Score=314.48  Aligned_cols=250  Identities=26%  Similarity=0.405  Sum_probs=202.3

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      +|.+.+.||+|+||.||+|.++.++..||+|.+...   ....+.+..|+.+++.+     .|++++++++.+......+
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~-----~h~~i~~~~~~~~~~~~~~   75 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKM-----KHPNIVTFFASFQENGRLF   75 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhC-----CCCChhhhhheeccCCeEE
Confidence            488999999999999999999999999999998643   13345567888888888     5688999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +|+||+ +++|.+++.......+++..+..++.|++.||.|||+.+|+|+||||+||++++++                 
T Consensus        76 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~-----------------  138 (257)
T cd08225          76 IVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNG-----------------  138 (257)
T ss_pred             EEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCC-----------------
Confidence            999999 89999999775545689999999999999999999999999999999999996432                 


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                               ..++|+|||.+.......   ....|++.|+|||++.+..++.++|+||||+++|+|++|..||...+..+
T Consensus       139 ---------~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~  209 (257)
T cd08225         139 ---------MVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQ  209 (257)
T ss_pred             ---------CeEEecccccchhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence                     235666666665433222   12358899999999988889999999999999999999999998655433


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+..                       +.+.                         ...+..+.++.++|.+||+.+
T Consensus       210 ~~~~~~~-----------------------~~~~-------------------------~~~~~~~~~~~~~i~~~l~~~  241 (257)
T cd08225         210 LVLKICQ-----------------------GYFA-------------------------PISPNFSRDLRSLISQLFKVS  241 (257)
T ss_pred             HHHHHhc-----------------------ccCC-------------------------CCCCCCCHHHHHHHHHHhccC
Confidence            3221110                       0000                         011245668999999999999


Q ss_pred             CCCCCCHHHHhcCCCC
Q 013973          411 PTDRLTAREALRHPFF  426 (433)
Q Consensus       411 P~~R~ta~ell~hp~f  426 (433)
                      |++|||+.|++.||||
T Consensus       242 p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         242 PRDRPSITSILKRPFL  257 (257)
T ss_pred             hhhCcCHHHHhhCCCC
Confidence            9999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.2e-42  Score=335.98  Aligned_cols=245  Identities=28%  Similarity=0.425  Sum_probs=203.7

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      +.+.|.+...+|.|+|+.|-.+.+..+++.+++|++...   ......|+.++....    .|+|++++.+.+.+..+.|
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~---~~~~~~e~~~~~~~~----~h~niv~~~~v~~~~~~~~  392 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR---ADDNQDEIPISLLVR----DHPNIVKSHDVYEDGKEIY  392 (612)
T ss_pred             cchhhccccccCCCCccceeeeeccccccchhheecccc---ccccccccchhhhhc----CCCcceeecceecCCceee
Confidence            456789999999999999999999999999999999754   233445676666653    5688999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +|||.+ |+.|.+.+....   ....++..|+.||+.|+.|||++|||||||||+|||++                    
T Consensus       393 ~v~e~l~g~ell~ri~~~~---~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~--------------------  449 (612)
T KOG0603|consen  393 LVMELLDGGELLRRIRSKP---EFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD--------------------  449 (612)
T ss_pred             eeehhccccHHHHHHHhcc---hhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec--------------------
Confidence            999999 888888877653   33378888999999999999999999999999999993                    


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChH-HHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL-EHL  332 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~-~~~  332 (433)
                            +..++++|+|||.+...+..-.+.+-|..|.|||++....|+.++||||||++||+||+|+.||...... ++.
T Consensus       450 ------~~~g~lrltyFG~a~~~~~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~  523 (612)
T KOG0603|consen  450 ------GSAGHLRLTYFGFWSELERSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIH  523 (612)
T ss_pred             ------CCCCcEEEEEechhhhCchhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHH
Confidence                  2345789999999887766644456789999999999999999999999999999999999999876554 222


Q ss_pred             HHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCC
Q 013973          333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPT  412 (433)
Q Consensus       333 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  412 (433)
                      ..    ++.                   +.                            +....|.+++|||.+||+.||.
T Consensus       524 ~~----i~~-------------------~~----------------------------~s~~vS~~AKdLl~~LL~~dP~  552 (612)
T KOG0603|consen  524 TR----IQM-------------------PK----------------------------FSECVSDEAKDLLQQLLQVDPA  552 (612)
T ss_pred             Hh----hcC-------------------Cc----------------------------cccccCHHHHHHHHHhccCChh
Confidence            21    111                   11                            1136788999999999999999


Q ss_pred             CCCCHHHHhcCCCC
Q 013973          413 DRLTAREALRHPFF  426 (433)
Q Consensus       413 ~R~ta~ell~hp~f  426 (433)
                      +||++.|++.||||
T Consensus       553 ~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  553 LRLGADEIGAHPWF  566 (612)
T ss_pred             hCcChhhhccCcch
Confidence            99999999999999

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=5.3e-41  Score=317.95  Aligned_cols=275  Identities=31%  Similarity=0.530  Sum_probs=217.3

Q ss_pred             EEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           99 YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      |++.+.||+|+||.||+|.+..+++.||+|++...   ....+....|+.+++.+     .|++++++++.+...+..++
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~~~~~~   75 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKEL-----KHPNIVKLLDVIHTERKLYL   75 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhc-----CCCCHHHHHhhhhcCCceEE
Confidence            56788999999999999999999999999998753   23345566788888887     57889999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          176 VFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       176 V~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      ||||++++|.+++.... ..+++..+..++.|++.||.|||++||+|+||+|+||++++                     
T Consensus        76 v~e~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~---------------------  133 (282)
T cd07829          76 VFEYCDMDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINR---------------------  133 (282)
T ss_pred             EecCcCcCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcC---------------------
Confidence            99999889999998753 36999999999999999999999999999999999999954                     


Q ss_pred             cccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          256 FKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                            ++.++|+|||.+.......   ....++..|+|||.+.+. .++.++|+|||||++|||++|.+||...+..+.
T Consensus       134 ------~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~  207 (282)
T cd07829         134 ------DGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQ  207 (282)
T ss_pred             ------CCCEEEecCCcccccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence                  4556666666665433221   123457789999999876 789999999999999999999999999888888


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      +..+.+.++......+..+....  +...   .++...               ........+..+.++.++|.+||+.||
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~---------------~~~~~~~~~~~~~~~~~~i~~~l~~~P  267 (282)
T cd07829         208 LFKIFQILGTPTEESWPGVTKLP--DYKP---TFPKFP---------------PKDLEKVLPRLDPEGIDLLSKMLQYNP  267 (282)
T ss_pred             HHHHHHHhCCCcHHHHHhhcccc--cccc---cccccC---------------ccchHHhcccccHHHHHHHHHhhccCc
Confidence            88888888877766655443322  0000   000000               000011123447789999999999999


Q ss_pred             CCCCCHHHHhcCCCC
Q 013973          412 TDRLTAREALRHPFF  426 (433)
Q Consensus       412 ~~R~ta~ell~hp~f  426 (433)
                      ++||++.+++.||||
T Consensus       268 ~~Rp~~~~~l~~p~~  282 (282)
T cd07829         268 AKRISAKEALKHPYF  282 (282)
T ss_pred             ccCCCHHHHhhCcCC
Confidence            999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=4.1e-41  Score=315.67  Aligned_cols=244  Identities=28%  Similarity=0.457  Sum_probs=197.6

Q ss_pred             eeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecC
Q 013973          105 MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  180 (433)
Q Consensus       105 iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~  180 (433)
                      ||.|+||.||+|.+..+++.||+|++....    ...+.+..|+.+++.+     .|++++++++.+.++..+|+||||+
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~   75 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEEC-----NHPFIVKLYRTFKDKKYIYMLMEYC   75 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhC-----CCCCEeeeeeeEEcCCccEEEEecC
Confidence            699999999999999999999999986432    2345567788888877     6789999999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccC
Q 013973          181 -GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM  259 (433)
Q Consensus       181 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~  259 (433)
                       +++|.+++.+..  .+++..+..++.||+.||.|||+.|++|+||||+||+++.                         
T Consensus        76 ~~~~L~~~l~~~~--~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~-------------------------  128 (262)
T cd05572          76 LGGELWTILRDRG--LFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDS-------------------------  128 (262)
T ss_pred             CCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcC-------------------------
Confidence             899999998754  6899999999999999999999999999999999999954                         


Q ss_pred             CCCCCEEEEecCCccccCCC--CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC--hHHHHHHH
Q 013973          260 PKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE--NLEHLAMM  335 (433)
Q Consensus       260 ~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~--~~~~~~~i  335 (433)
                        ++.++|+|||.+......  .....|+..|+|||.+.+..++.++|+||||+++|+|++|..||....  ..+....+
T Consensus       129 --~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  206 (262)
T cd05572         129 --NGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDI  206 (262)
T ss_pred             --CCCEEEeeCCcccccCcccccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHH
Confidence              456777777776544332  223468899999999988889999999999999999999999997655  22222211


Q ss_pred             HHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCC
Q 013973          336 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  415 (433)
Q Consensus       336 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  415 (433)
                      ..  +                   .....                          .+...+.++.++|.+||+.||++|+
T Consensus       207 ~~--~-------------------~~~~~--------------------------~~~~~~~~~~~~i~~~l~~~p~~R~  239 (262)
T cd05572         207 LK--G-------------------NGKLE--------------------------FPNYIDKAAKDLIKQLLRRNPEERL  239 (262)
T ss_pred             hc--c-------------------CCCCC--------------------------CCcccCHHHHHHHHHHccCChhhCc
Confidence            10  0                   00001                          1223466899999999999999999


Q ss_pred             C-----HHHHhcCCCCCCC
Q 013973          416 T-----AREALRHPFFTRD  429 (433)
Q Consensus       416 t-----a~ell~hp~f~~~  429 (433)
                      +     ++|+++||||++-
T Consensus       240 ~~~~~~~~~l~~~~~~~~~  258 (262)
T cd05572         240 GNLKGGIKDIKKHKWFNGF  258 (262)
T ss_pred             CCcccCHHHHhcChhhhCC
Confidence            9     9999999999863

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=8.5e-41  Score=313.45  Aligned_cols=257  Identities=28%  Similarity=0.453  Sum_probs=197.9

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh---hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK---YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      +|++.+.||+|+||.||+|.+..+++.||+|.++....   ....+..|+.+++.+     +|++|+++++.+...+.++
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l-----~~~~i~~~~~~~~~~~~~~   75 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELL-----KHPNLVKYYGVEVHREKVY   75 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhC-----CCCChhheeeeEecCCEEE
Confidence            58999999999999999999999999999999874432   456677889988888     6688999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +|+||+ +++|.+++....  .+++..+..++.|++.||.|||+.||+|+||||+||++++++.++|+|||.+.......
T Consensus        76 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~  153 (264)
T cd06626          76 IFMEYCSGGTLEELLEHGR--ILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT  153 (264)
T ss_pred             EEEecCCCCcHHHHHhhcC--CCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence            999999 899999998653  68999999999999999999999999999999999999665555554444433222111


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCC---CCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                      ...                    ........++..|+|||++.+..   ++.++||||||+++|+|++|..||...+...
T Consensus       154 ~~~--------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~  213 (264)
T cd06626         154 TTM--------------------GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF  213 (264)
T ss_pred             Ccc--------------------cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH
Confidence            000                    00001235788999999998766   8899999999999999999999997653322


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ........ +..+                    ..|.                        ....+..+.+||.+||+.|
T Consensus       214 ~~~~~~~~-~~~~--------------------~~~~------------------------~~~~~~~~~~li~~~l~~~  248 (264)
T cd06626         214 QIMFHVGA-GHKP--------------------PIPD------------------------SLQLSPEGKDFLDRCLESD  248 (264)
T ss_pred             HHHHHHhc-CCCC--------------------CCCc------------------------ccccCHHHHHHHHHHccCC
Confidence            21111110 1100                    0000                        1123667899999999999


Q ss_pred             CCCCCCHHHHhcCCCC
Q 013973          411 PTDRLTAREALRHPFF  426 (433)
Q Consensus       411 P~~R~ta~ell~hp~f  426 (433)
                      |++|||+.|++.|||+
T Consensus       249 p~~R~~~~~i~~~~~~  264 (264)
T cd06626         249 PKKRPTASELLQHPFV  264 (264)
T ss_pred             cccCCCHHHHhcCCCC
Confidence            9999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=1.9e-41  Score=324.35  Aligned_cols=251  Identities=24%  Similarity=0.435  Sum_probs=201.1

Q ss_pred             EEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEE
Q 013973           99 YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  177 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~  177 (433)
                      |.....||+|+||.||+|.+..+++.||+|++... ....+.+..|+.++..+     .|++++++++.+..++..|+||
T Consensus        23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-----~hp~i~~~~~~~~~~~~~~iv~   97 (297)
T cd06659          23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY-----QHQNVVEMYKSYLVGEELWVLM   97 (297)
T ss_pred             HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhC-----CCCchhhhhhheeeCCeEEEEE
Confidence            55566899999999999999999999999998632 23345566788888777     6789999999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCccc
Q 013973          178 EKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  256 (433)
Q Consensus       178 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~  256 (433)
                      ||+ +++|.+++...   .+++..+..++.|++.||.|||++||+||||||+||+++.                      
T Consensus        98 e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~----------------------  152 (297)
T cd06659          98 EFLQGGALTDIVSQT---RLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTL----------------------  152 (297)
T ss_pred             ecCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEcc----------------------
Confidence            999 88999887653   5899999999999999999999999999999999999954                      


Q ss_pred             ccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 013973          257 KRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA  333 (433)
Q Consensus       257 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~  333 (433)
                           ++.++|+|||++......   .....|+..|+|||++.+..++.++|+|||||++|||++|..||...+..+...
T Consensus       153 -----~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~  227 (297)
T cd06659         153 -----DGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK  227 (297)
T ss_pred             -----CCcEEEeechhHhhcccccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence                 455667777766433221   123578999999999998889999999999999999999999998766544433


Q ss_pred             HHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCC
Q 013973          334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  413 (433)
Q Consensus       334 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  413 (433)
                      .+...   .+.                    .                       .......+.++.++|.+||+.||++
T Consensus       228 ~~~~~---~~~--------------------~-----------------------~~~~~~~~~~l~~~i~~~l~~~P~~  261 (297)
T cd06659         228 RLRDS---PPP--------------------K-----------------------LKNAHKISPVLRDFLERMLTREPQE  261 (297)
T ss_pred             HHhcc---CCC--------------------C-----------------------ccccCCCCHHHHHHHHHHhcCCccc
Confidence            22110   000                    0                       0011234667899999999999999


Q ss_pred             CCCHHHHhcCCCCCCCC
Q 013973          414 RLTAREALRHPFFTRDH  430 (433)
Q Consensus       414 R~ta~ell~hp~f~~~~  430 (433)
                      ||++.++++||||.+..
T Consensus       262 Rps~~~ll~~~~~~~~~  278 (297)
T cd06659         262 RATAQELLDHPFLLQTG  278 (297)
T ss_pred             CcCHHHHhhChhhccCC
Confidence            99999999999998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=100.00  E-value=4.4e-41  Score=353.70  Aligned_cols=144  Identities=22%  Similarity=0.365  Sum_probs=129.2

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|.++++||+|+||.||+|.+..+++.||||+++...    .....+..|+.+++.+     .|++|+.++..+....+
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~Iv~~~~~~~~~~~   78 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALS-----KSPFIVHLYYSLQSANN   78 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhc-----CCCCcCeEEEEEEECCE
Confidence            56999999999999999999999999999999997432    2235566788888776     66889999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                      +||||||+ |++|.+++...+  .+++..++.|+.||+.||.|||+.|||||||||+||||+.++.++|+|||++.
T Consensus        79 ~~lVmEy~~g~~L~~li~~~~--~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~  152 (669)
T cd05610          79 VYLVMEYLIGGDVKSLLHIYG--YFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK  152 (669)
T ss_pred             EEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence            99999999 999999997654  68999999999999999999999999999999999999999999999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=9.3e-41  Score=314.40  Aligned_cols=251  Identities=26%  Similarity=0.393  Sum_probs=195.6

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  176 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV  176 (433)
                      .+.....||+|+||.||+|.+..++..||+|.+... ....+.+..|+.+++.+     .|++|+++++.+...+..++|
T Consensus         9 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv   83 (268)
T cd06624           9 ENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYL-----KHRNIVQYLGSDSENGFFKIF   83 (268)
T ss_pred             cCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhc-----CCCCeeeeeeeeccCCEEEEE
Confidence            344557899999999999999999999999988643 23445677888888887     678999999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCC--CHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          177 FEKL-GSSLYDFLRKNNYRSF--PIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       177 ~e~~-~~~L~~~l~~~~~~~l--~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      |||+ +++|.+++.... ..+  ++..+..++.||+.||.|||++||+||||||+||+++.                   
T Consensus        84 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~-------------------  143 (268)
T cd06624          84 MEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNT-------------------  143 (268)
T ss_pred             EecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC-------------------
Confidence            9999 899999998642 235  88889999999999999999999999999999999953                   


Q ss_pred             cccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCC--CCCCcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGL--GWTYPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                             ....++|+|||.+......   .....|+..|+|||++...  .++.++|+||||+++|+|++|..||.....
T Consensus       144 -------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~  216 (268)
T cd06624         144 -------YSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGE  216 (268)
T ss_pred             -------CCCeEEEecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccC
Confidence                   1345777777766543221   1223578999999998764  378999999999999999999999975432


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      ............                                              .....+..++.++.+|+.+||+
T Consensus       217 ~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~~~li~~~l~  250 (268)
T cd06624         217 PQAAMFKVGMFK----------------------------------------------IHPEIPESLSAEAKNFILRCFE  250 (268)
T ss_pred             hhhhHhhhhhhc----------------------------------------------cCCCCCcccCHHHHHHHHHHcC
Confidence            211100000000                                              0001123456789999999999


Q ss_pred             cCCCCCCCHHHHhcCCCC
Q 013973          409 YDPTDRLTAREALRHPFF  426 (433)
Q Consensus       409 ~dP~~R~ta~ell~hp~f  426 (433)
                      .+|.+|||+.|++.||||
T Consensus       251 ~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         251 PDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             CCchhCCCHHHHHhCCCC
Confidence            999999999999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=3.8e-41  Score=332.46  Aligned_cols=249  Identities=23%  Similarity=0.356  Sum_probs=191.5

Q ss_pred             CcEEEEeeeeccccEEEEEEEE-----CCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           97 SRYKIHSKMGEGTFGQVLECWD-----RERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~-----~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      ++|++.+.||+|+||.||+|..     ..++..||+|+++...  ...+.+..|+.++..+.    +|+||+++++.+..
T Consensus        35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~----~HpnIv~l~~~~~~  110 (375)
T cd05104          35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG----NHINIVNLLGACTV  110 (375)
T ss_pred             HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhc----CCcceeeeeeeecc
Confidence            5799999999999999999964     3567789999986432  33456778999988873    46889999999999


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcC--------------------------------------------------------
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNN--------------------------------------------------------  192 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~--------------------------------------------------------  192 (433)
                      .+..++||||+ +|+|.+++....                                                        
T Consensus       111 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  190 (375)
T cd05104         111 GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVR  190 (375)
T ss_pred             CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccc
Confidence            99999999999 999999987532                                                        


Q ss_pred             -----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          193 -----------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       193 -----------------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                                       ...+++..+..++.||+.||.|||+.||+||||||+|||++.++                   
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~-------------------  251 (375)
T cd05104         191 SGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGR-------------------  251 (375)
T ss_pred             cceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCC-------------------
Confidence                             12478889999999999999999999999999999999996544                   


Q ss_pred             cccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChH
Q 013973          256 FKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  329 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~  329 (433)
                              .+||+|||++.......     ....++..|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus       252 --------~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~  323 (375)
T cd05104         252 --------ITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD  323 (375)
T ss_pred             --------cEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch
Confidence                    45555555554332211     11234667999999999999999999999999999998 89999765433


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      .......                      ..+..                         ...+...+.++.+||.+||+.
T Consensus       324 ~~~~~~~----------------------~~~~~-------------------------~~~~~~~~~~l~~li~~cl~~  356 (375)
T cd05104         324 SKFYKMI----------------------KEGYR-------------------------MLSPECAPSEMYDIMKSCWDA  356 (375)
T ss_pred             HHHHHHH----------------------HhCcc-------------------------CCCCCCCCHHHHHHHHHHccC
Confidence            2221110                      01000                         001123456899999999999


Q ss_pred             CCCCCCCHHHHhcC
Q 013973          410 DPTDRLTAREALRH  423 (433)
Q Consensus       410 dP~~R~ta~ell~h  423 (433)
                      ||++|||+.|+++.
T Consensus       357 dP~~RPs~~eil~~  370 (375)
T cd05104         357 DPLKRPTFKQIVQL  370 (375)
T ss_pred             ChhHCcCHHHHHHH
Confidence            99999999999863

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=1.6e-41  Score=318.76  Aligned_cols=255  Identities=26%  Similarity=0.441  Sum_probs=202.9

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      +|++.+.||+|+||.||+|.++.+++.||+|.+...  ......+..|+++++.+     .|++++++++.+...+.+++
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~~~~~l   76 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKC-----NSPYIVGFYGAFYNNGDISI   76 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHC-----CCCchhhhheeeecCCEEEE
Confidence            588899999999999999999999999999998643  23445667788888877     57889999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      ||||+ +++|.+++.... ..+++..+..++.|++.||+|||+ .|++|+||||+||+++                    
T Consensus        77 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~--------------------  135 (265)
T cd06605          77 CMEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVN--------------------  135 (265)
T ss_pred             EEEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEEC--------------------
Confidence            99999 799999998653 479999999999999999999999 9999999999999994                    


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCC-CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCh--HH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN--LE  330 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~--~~  330 (433)
                             .++.++|+|||.+....... ....|+..|+|||++.+..++.++|+||||+++|+|++|..||.....  ..
T Consensus       136 -------~~~~~~l~d~g~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~  208 (265)
T cd06605         136 -------SRGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDG  208 (265)
T ss_pred             -------CCCCEEEeecccchhhHHHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccccc
Confidence                   44567778887765432211 125788999999999999999999999999999999999999965421  11


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+.......+                   ...+                         ...++.++.+||.+||..|
T Consensus       209 ~~~~~~~~~~~~~-------------------~~~~-------------------------~~~~~~~~~~li~~~l~~~  244 (265)
T cd06605         209 IFELLQYIVNEPP-------------------PRLP-------------------------SGKFSPDFQDFVNLCLIKD  244 (265)
T ss_pred             HHHHHHHHhcCCC-------------------CCCC-------------------------hhhcCHHHHHHHHHHcCCC
Confidence            1111111111000                   0000                         0115678999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCC
Q 013973          411 PTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       411 P~~R~ta~ell~hp~f~~~  429 (433)
                      |++|||+.|++.||||+.-
T Consensus       245 p~~Rpt~~~ll~~~~~~~~  263 (265)
T cd06605         245 PRERPSYKELLEHPFIKKY  263 (265)
T ss_pred             chhCcCHHHHhhCchhhcc
Confidence            9999999999999999753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=7.2e-41  Score=321.74  Aligned_cols=253  Identities=25%  Similarity=0.384  Sum_probs=202.5

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      ...|++.+.||+|+||.||+|.+..+++.||+|++...    ......+..|+++++.+     .|+|++++.+.+...+
T Consensus        14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l-----~h~niv~~~~~~~~~~   88 (307)
T cd06607          14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQL-----RHPNTIEYKGCYLREH   88 (307)
T ss_pred             chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhC-----CCCCEEEEEEEEEeCC
Confidence            35699999999999999999999999999999988632    22334567788888887     6789999999999999


Q ss_pred             eEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          172 HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       172 ~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      ..|+||||+.++|.+++.... ..+++..+..++.||+.||.|||+.||+|+||+|+||+++                  
T Consensus        89 ~~~lv~e~~~g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~------------------  149 (307)
T cd06607          89 TAWLVMEYCLGSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLT------------------  149 (307)
T ss_pred             eEEEEHHhhCCCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEC------------------
Confidence            999999999888888876543 3699999999999999999999999999999999999994                  


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhh---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                               .++.++|+|||++...... ....|+..|+|||++.   ...++.++||||||+++|||++|..||...+.
T Consensus       150 ---------~~~~~kL~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~  219 (307)
T cd06607         150 ---------EPGTVKLADFGSASLVSPA-NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA  219 (307)
T ss_pred             ---------CCCCEEEeecCcceecCCC-CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccH
Confidence                     4456777777776544332 2346888999999885   35688999999999999999999999987655


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      ......+...  ..+                    ..+                         ...++.++.+||.+||+
T Consensus       220 ~~~~~~~~~~--~~~--------------------~~~-------------------------~~~~~~~~~~li~~~l~  252 (307)
T cd06607         220 MSALYHIAQN--DSP--------------------TLS-------------------------SNDWSDYFRNFVDSCLQ  252 (307)
T ss_pred             HHHHHHHhcC--CCC--------------------CCC-------------------------chhhCHHHHHHHHHHhc
Confidence            4433221110  000                    000                         01245578999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCC
Q 013973          409 YDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       409 ~dP~~R~ta~ell~hp~f~~~  429 (433)
                      .||++||++.+++.||||...
T Consensus       253 ~~p~~Rp~~~~il~~~~~~~~  273 (307)
T cd06607         253 KIPQDRPSSEELLKHRFVLRE  273 (307)
T ss_pred             CChhhCcCHHHHhcChhhccc
Confidence            999999999999999999765

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=4.8e-41  Score=327.23  Aligned_cols=292  Identities=32%  Similarity=0.484  Sum_probs=215.1

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec-
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY-  169 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~-  169 (433)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|.+...   .........|+.+++++.    +|+||+++++++.. 
T Consensus         4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~----~h~ni~~~~~~~~~~   79 (337)
T cd07852           4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELG----DHPNIVKLLNVIKAE   79 (337)
T ss_pred             hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhc----CCCCccceeeeeccC
Confidence            4567899999999999999999999999999999987431   223344566888888772    45789999998754 


Q ss_pred             -CCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          170 -RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       170 -~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                       ...+|+||||++++|.+++...   .+++..+..++.||+.||.|||+.||+||||||+||+++.++.++|+|||++..
T Consensus        80 ~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~  156 (337)
T cd07852          80 NDKDIYLVFEYMETDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARS  156 (337)
T ss_pred             CCceEEEEecccccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence             3478999999988999998764   688999999999999999999999999999999999996655555555544332


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                      .......                   ..........||..|+|||++.+ ..++.++|+||||+++|+|++|+.||.+..
T Consensus       157 ~~~~~~~-------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~  217 (337)
T cd07852         157 LSELEEN-------------------PENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTS  217 (337)
T ss_pred             ccccccc-------------------ccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCC
Confidence            2111000                   00011123468999999998765 457899999999999999999999999888


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ..+....+....+..+...+..........+... .                ...... .........+.++.+||.+||
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----------------~~~~~~-~~~~~~~~~~~~l~~li~~~l  279 (337)
T cd07852         218 TLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDS-L----------------PSRPRK-PLDELLPKASDDALDLLKKLL  279 (337)
T ss_pred             hHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhh-c----------------cccccc-chhhhccCCCHHHHHHHHHhc
Confidence            8888888888777766655444432221111000 0                000000 011122346788999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCC
Q 013973          408 RYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       408 ~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      +.||++|||+.++++||||++-
T Consensus       280 ~~~P~~Rps~~~il~~~~~~~~  301 (337)
T cd07852         280 VFNPNKRLTAEEALEHPYVAQF  301 (337)
T ss_pred             cCCcccccCHHHHhhChhhhhh
Confidence            9999999999999999999753

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.5e-40  Score=316.44  Aligned_cols=264  Identities=23%  Similarity=0.358  Sum_probs=199.9

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec--CCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY--RNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~--~~~  172 (433)
                      ++|+..+.||.|++|.||+|.+..+++.||+|.+....  .....+..|+++++.+     +|++|+++++.+..  .+.
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~~   75 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSC-----KSPYIVKYYGAFLDESSSS   75 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhC-----CCCCeeeeeeEEEccCCCe
Confidence            35899999999999999999999999999999987432  3445677899988888     67899999998754  457


Q ss_pred             EEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      +|+||||+ +++|.+++...  ....+++..+..++.||+.||.|||+.|++|+||+|+||+++++              
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~--------------  141 (287)
T cd06621          76 IGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRK--------------  141 (287)
T ss_pred             EEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecC--------------
Confidence            99999999 88999887542  22468999999999999999999999999999999999999544              


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCC-CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPD-QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                                   +.++|+|||++...... .....++..|+|||.+.+..++.++|+|||||++|+|++|..||.....
T Consensus       142 -------------~~~~l~dfg~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~  208 (287)
T cd06621         142 -------------GQVKLCDFGVSGELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGE  208 (287)
T ss_pred             -------------CeEEEeeccccccccccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccC
Confidence                         45666666665432221 1234578899999999998999999999999999999999999976522


Q ss_pred             --HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          329 --LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       329 --~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                        ................                   ..+..                    .......++.+.+||.+|
T Consensus       209 ~~~~~~~~~~~~~~~~~~-------------------~~~~~--------------------~~~~~~~~~~~~~li~~~  249 (287)
T cd06621         209 PPLGPIELLSYIVNMPNP-------------------ELKDE--------------------PGNGIKWSEEFKDFIKQC  249 (287)
T ss_pred             CCCChHHHHHHHhcCCch-------------------hhccC--------------------CCCCCchHHHHHHHHHHH
Confidence              0000000000000000                   00000                    000012456789999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFTRDHL  431 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~~~~~  431 (433)
                      |+.||.+|||+.|+++||||++...
T Consensus       250 l~~~p~~Rpt~~eil~~~~~~~~~~  274 (287)
T cd06621         250 LEKDPTRRPTPWDMLEHPWIKAQMK  274 (287)
T ss_pred             cCCCcccCCCHHHHHhCcccccccc
Confidence            9999999999999999999976543

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.3e-42  Score=309.51  Aligned_cols=256  Identities=22%  Similarity=0.383  Sum_probs=201.5

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .++|.++++||+|+|++|.+++++.|.+.||+|++++.-    ...+-...|..+..+.    .++|.+|-+..+|+++.
T Consensus       249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~a----sn~pflvglhscfqtes  324 (593)
T KOG0695|consen  249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA----SNNPFLVGLHSCFQTES  324 (593)
T ss_pred             cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhc----cCCCeEEehhhhhcccc
Confidence            467999999999999999999999999999999997532    2222334455555444    47799999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+++|.||+ ||+|--+++..  ++|+++.+++|..+|+.||.|||++|||+||||.+|||++..|++|+.|||+++..-
T Consensus       325 rlffvieyv~ggdlmfhmqrq--rklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l  402 (593)
T KOG0695|consen  325 RLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL  402 (593)
T ss_pred             eEEEEEEEecCcceeeehhhh--hcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCC
Confidence            999999999 88887666654  489999999999999999999999999999999999999777776666666554331


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC---
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE---  327 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~---  327 (433)
                      .+                        ++..+++||||.|+|||++.+..|+..+|||+|||+|+||+.|+.||.-..   
T Consensus       403 ~~------------------------gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n  458 (593)
T KOG0695|consen  403 GP------------------------GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDN  458 (593)
T ss_pred             CC------------------------CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCC
Confidence            11                        123356799999999999999999999999999999999999999996321   


Q ss_pred             ----hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          328 ----NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       328 ----~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                          ..+++-++                      |...                +          ...+..++-.+..++
T Consensus       459 ~d~ntedylfqv----------------------ilek----------------q----------iriprslsvkas~vl  490 (593)
T KOG0695|consen  459 PDMNTEDYLFQV----------------------ILEK----------------Q----------IRIPRSLSVKASHVL  490 (593)
T ss_pred             cccchhHHHHHH----------------------Hhhh----------------c----------ccccceeehhhHHHH
Confidence                11111110                      0000                1          112335666788899


Q ss_pred             HhccccCCCCCCC------HHHHhcCCCCCCC
Q 013973          404 QGLLRYDPTDRLT------AREALRHPFFTRD  429 (433)
Q Consensus       404 ~~~L~~dP~~R~t------a~ell~hp~f~~~  429 (433)
                      +..|++||.+|+.      ..++..|+||...
T Consensus       491 kgflnkdp~erlgc~~~~g~~dik~h~ffr~i  522 (593)
T KOG0695|consen  491 KGFLNKDPKERLGCRPQTGFSDIKSHAFFRSI  522 (593)
T ss_pred             HHhhcCCcHHhcCCCcccchhhhhcchhhhhC
Confidence            9999999999985      6799999999753

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.8e-43  Score=309.37  Aligned_cols=287  Identities=27%  Similarity=0.485  Sum_probs=221.8

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeec---chhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec----
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY----  169 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~----  169 (433)
                      +.|+-..+||+|.||.||+|+.+.+++.||+|++--   .........+|+.+|..+     .|+|++.+++.+..    
T Consensus        17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~l-----kHenv~nliEic~tk~Tp   91 (376)
T KOG0669|consen   17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLL-----KHENVVNLIEICRTKATP   91 (376)
T ss_pred             hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHh-----cchhHHHHHHHHhhccCC
Confidence            568888999999999999999999999999986521   122345567899999998     55778887777643    


Q ss_pred             ----CCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcC
Q 013973          170 ----RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  245 (433)
Q Consensus       170 ----~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~  245 (433)
                          ...+|+||.+|..+|...|.... .+|+..++..++.+++.||.|+|++.|+|||+|++|+||+.+|.        
T Consensus        92 ~~r~r~t~ylVf~~cehDLaGlLsn~~-vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgi--------  162 (376)
T KOG0669|consen   92 TNRDRATFYLVFDFCEHDLAGLLSNRK-VRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGI--------  162 (376)
T ss_pred             cccccceeeeeHHHhhhhHHHHhcCcc-ccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCce--------
Confidence                34699999999999999987543 57999999999999999999999999999999999999965555        


Q ss_pred             CCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-------CceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHH
Q 013973          246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-------NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELC  317 (433)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~ell  317 (433)
                                         +||+|||+++......       +..+-|.+|.+||.+.+. .|+++.|||..||++.||.
T Consensus       163 -------------------lklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMw  223 (376)
T KOG0669|consen  163 -------------------LKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMW  223 (376)
T ss_pred             -------------------EEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHH
Confidence                               5555555553222111       223569999999999975 5999999999999999999


Q ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhh-ccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCch
Q 013973          318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYV-RRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA  396 (433)
Q Consensus       318 tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (433)
                      +|.+.|++.++..++..|..++|....+.|+.+........ +...  .|....           ..+.+...++  .-.
T Consensus       224 trspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~eP--l~~~~~-----------rkv~n~~kp~--~kd  288 (376)
T KOG0669|consen  224 TRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEP--LPKGQK-----------RKVKNRLKPY--VKD  288 (376)
T ss_pred             ccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCC--CCcchh-----------hhhhhhcccc--cCC
Confidence            99999999999999999999999999998887755432211 1110  111111           1111111111  124


Q ss_pred             hHHHHHHHhccccCCCCCCCHHHHhcCCCCCCCCC
Q 013973          397 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL  431 (433)
Q Consensus       397 ~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~~~  431 (433)
                      .++.||+.+||..||.+|+++.++|.|.||..+..
T Consensus       289 ~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~  323 (376)
T KOG0669|consen  289 DEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPM  323 (376)
T ss_pred             hhHHHHHHHHhccCcccCcchHhhhchhhhhcCCc
Confidence            57899999999999999999999999999987653

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=1.7e-41  Score=329.12  Aligned_cols=302  Identities=16%  Similarity=0.188  Sum_probs=198.2

Q ss_pred             eeeecc--ccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEE
Q 013973          103 SKMGEG--TFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  177 (433)
Q Consensus       103 ~~iG~G--~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~  177 (433)
                      ..||+|  +||+||+|.+..+++.||+|++....   ...+.+..|+.+++.+     +|+||+++++++..++..++||
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l-----~h~niv~~~~~~~~~~~~~~v~   78 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFF-----RHPNIMTSWTVFTTGSWLWVIS   78 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhC-----CCCCcceEeeeEecCCceEEEE
Confidence            466776  99999999999999999999986432   2335566677777666     6789999999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCccc
Q 013973          178 EKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  256 (433)
Q Consensus       178 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~  256 (433)
                      ||+ +++|.+++.......+++..+..++.||+.||+|||+.||+||||||+|||++.++.++++||+.+......    
T Consensus        79 e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~----  154 (328)
T cd08226          79 PFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRN----  154 (328)
T ss_pred             ecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhcc----
Confidence            999 889999998765456999999999999999999999999999999999999987776666666532211000    


Q ss_pred             ccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCC--CCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 013973          257 KRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL--GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM  334 (433)
Q Consensus       257 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~  334 (433)
                                   .+.............++..|+|||++.+.  .++.++|||||||++|+|++|..||......+....
T Consensus       155 -------------~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~  221 (328)
T cd08226         155 -------------GQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQ  221 (328)
T ss_pred             -------------CccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHH
Confidence                         00000000001112356779999999764  478999999999999999999999987655443322


Q ss_pred             HHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhc-cchhHHHHHhhhcCCchhHHHHHHHhccccCCCC
Q 013973          335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVM-KLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  413 (433)
Q Consensus       335 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  413 (433)
                      ........|......  ......+..+...+.. ......+.... ...............++.++.+||++||+.||++
T Consensus       222 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~  298 (328)
T cd08226         222 KLKGPPYSPLDITTF--PCEESRMKNSQSGVDS-GIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEK  298 (328)
T ss_pred             HhcCCCCCCcccccc--chhhhhhccchhhhhc-ccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCccc
Confidence            221111111000000  0000000000000000 00000000000 0000000011112356778999999999999999


Q ss_pred             CCCHHHHhcCCCCCCC
Q 013973          414 RLTAREALRHPFFTRD  429 (433)
Q Consensus       414 R~ta~ell~hp~f~~~  429 (433)
                      |||+.|+|+||||.+.
T Consensus       299 Rpta~e~l~~~~~~~~  314 (328)
T cd08226         299 RPSASSLLSHAFFKQV  314 (328)
T ss_pred             CCCHHHHhhCHHHHHH
Confidence            9999999999999754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=6.3e-41  Score=314.23  Aligned_cols=245  Identities=23%  Similarity=0.346  Sum_probs=195.4

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  176 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV  176 (433)
                      ++|+++++||+|+||.||+|.+. ++..||+|.+.......+.+..|+.+++.+     .|++++++++.+...+..++|
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv   79 (261)
T cd05072           6 ESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQAFLEEANLMKTL-----QHDKLVRLYAVVTKEEPIYII   79 (261)
T ss_pred             HHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCchhHHHHHHHHHHHHhC-----CCCCeeeEEEEEcCCCCcEEE
Confidence            57999999999999999999875 456699998875444556778899999888     678899999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          177 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       177 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      |||+ +++|.+++.......+++..+..++.|++.||+|||+.+++||||||+||+++.++.+                 
T Consensus        80 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~-----------------  142 (261)
T cd05072          80 TEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMC-----------------  142 (261)
T ss_pred             EecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcE-----------------
Confidence            9999 8999999987555578999999999999999999999999999999999999655544                 


Q ss_pred             cccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChHH
Q 013973          256 FKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  330 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~  330 (433)
                                +|+|||.+.......    ....++..|+|||++.+..++.++|||||||++|+|++ |..||......+
T Consensus       143 ----------~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~  212 (261)
T cd05072         143 ----------KIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD  212 (261)
T ss_pred             ----------EECCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH
Confidence                      555555444322111    11245678999999998889999999999999999998 999998765544


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+....                        .++                        ....++.++.+++.+||+.|
T Consensus       213 ~~~~~~~~~------------------------~~~------------------------~~~~~~~~~~~li~~~l~~~  244 (261)
T cd05072         213 VMSALQRGY------------------------RMP------------------------RMENCPDELYDIMKTCWKEK  244 (261)
T ss_pred             HHHHHHcCC------------------------CCC------------------------CCCCCCHHHHHHHHHHccCC
Confidence            333221100                        000                        11245668999999999999


Q ss_pred             CCCCCCHHHHhc
Q 013973          411 PTDRLTAREALR  422 (433)
Q Consensus       411 P~~R~ta~ell~  422 (433)
                      |++||+++++++
T Consensus       245 p~~Rp~~~~i~~  256 (261)
T cd05072         245 AEERPTFDYLQS  256 (261)
T ss_pred             cccCcCHHHHHH
Confidence            999999999864

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=3.8e-41  Score=319.54  Aligned_cols=247  Identities=23%  Similarity=0.318  Sum_probs=195.6

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCC-----eEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERK-----EMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~-----~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      ++|++.+.||+|+||.||+|.+...+     ..||+|.++..  ......+..|+.++..+     .|++++++++++..
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l-----~h~~i~~~~~~~~~   79 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDL-----QHPNIVCLLGVCTK   79 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhc-----CCcccceEEEEEcC
Confidence            46999999999999999999876655     77999998643  23345567888888887     67899999999999


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeec
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNNY--------------RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVS  234 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~  234 (433)
                      .+..|++|||+ +++|.+++.....              ..+++..+..++.||+.||.|||++||+|+||||+|||+++
T Consensus        80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~  159 (283)
T cd05048          80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGE  159 (283)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcC
Confidence            99999999999 8999999976421              35888999999999999999999999999999999999965


Q ss_pred             cCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhCCCCCCcchhHHH
Q 013973          235 SEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYPCDIWSV  309 (433)
Q Consensus       235 ~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSl  309 (433)
                      ++.                           ++|+|||++......     .....+|+.|+|||++.+..++.++|||||
T Consensus       160 ~~~---------------------------~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~sl  212 (283)
T cd05048         160 GLT---------------------------VKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSF  212 (283)
T ss_pred             CCc---------------------------EEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHH
Confidence            554                           555555554332111     112356788999999998899999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHH
Q 013973          310 GCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI  388 (433)
Q Consensus       310 Gv~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (433)
                      ||++|||++ |..||.+....+....+...                       ..                         
T Consensus       213 G~il~el~~~g~~p~~~~~~~~~~~~i~~~-----------------------~~-------------------------  244 (283)
T cd05048         213 GVVLWEIFSYGLQPYYGFSNQEVIEMIRSR-----------------------QL-------------------------  244 (283)
T ss_pred             HHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-----------------------Cc-------------------------
Confidence            999999998 99999876654433322110                       00                         


Q ss_pred             hhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          389 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       389 ~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                      ...+..++.++.+|+.+||+.||.+||++.|++++
T Consensus       245 ~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         245 LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            00123567889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=3.3e-41  Score=321.99  Aligned_cols=253  Identities=27%  Similarity=0.437  Sum_probs=201.9

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      ++|++.+.||+|+||.||++.+..+++.||+|.+... ....+.+..|+.+++.+     .|++++++++.+...+..|+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-----~hp~i~~~~~~~~~~~~~~l   93 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMREN-----KHPNIVNYLDSYLVGDELWV   93 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhc-----CCCCeeehhheeeeCCcEEE
Confidence            6799999999999999999999989999999998632 23345567788888777     67899999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      |+||+ +++|.+++.+.   .+++..+..++.|++.||.|||++|++|+||||+||+++.++                  
T Consensus        94 v~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~------------------  152 (293)
T cd06647          94 VMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG------------------  152 (293)
T ss_pred             EEecCCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCC------------------
Confidence            99999 89999998764   588999999999999999999999999999999999995544                  


Q ss_pred             ccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                               .++|+|||++.......   ....|++.|+|||.+.+..++.++|+|||||++|++++|..||...+..+.
T Consensus       153 ---------~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~  223 (293)
T cd06647         153 ---------SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA  223 (293)
T ss_pred             ---------CEEEccCcceecccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh
Confidence                     45666666554322221   223688899999999888899999999999999999999999987554332


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      ...+..  +                    +...+                        ..+...+..+.+||.+||+.+|
T Consensus       224 ~~~~~~--~--------------------~~~~~------------------------~~~~~~~~~l~~li~~~l~~~p  257 (293)
T cd06647         224 LYLIAT--N--------------------GTPEL------------------------QNPEKLSAIFRDFLNRCLEMDV  257 (293)
T ss_pred             eeehhc--C--------------------CCCCC------------------------CCccccCHHHHHHHHHHccCCh
Confidence            211100  0                    00000                        0112345678999999999999


Q ss_pred             CCCCCHHHHhcCCCCCCCC
Q 013973          412 TDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       412 ~~R~ta~ell~hp~f~~~~  430 (433)
                      ++||++.+++.|+||+...
T Consensus       258 ~~Rp~~~~il~h~~~~~~~  276 (293)
T cd06647         258 EKRGSAKELLQHPFLKIAK  276 (293)
T ss_pred             hhCcCHHHHhcCHHHhcCc
Confidence            9999999999999998653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=1.2e-40  Score=312.07  Aligned_cols=249  Identities=24%  Similarity=0.440  Sum_probs=199.0

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee--cCCe
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD--YRNH  172 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~--~~~~  172 (433)
                      +|++.+.||.|+||.||+|.+..+++.||+|++...   ....+.+..|+.+++.+     .|++++++++.+.  ....
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   75 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILREL-----KHPNIVRYYDRIIDRSNQT   75 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhc-----CCCccceeeeeeecCCCCE
Confidence            489999999999999999999999999999998632   23445567788888888     6688999988764  4567


Q ss_pred             EEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHH-----HCCceeccCCCCceEeeccCccccCCCc
Q 013973          173 ICIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMH-----DLCMIHTDLKPENVLLVSSEYIKVPDYK  244 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH-----~~~ivHrDlKp~NILl~~~~~~~i~dfg  244 (433)
                      ++++|||+ +++|.+++...  ....+++..+..++.||+.||.|||     +.+|+|+||||+||+++++         
T Consensus        76 ~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~---------  146 (265)
T cd08217          76 LYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDAN---------  146 (265)
T ss_pred             EEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecC---------
Confidence            89999999 88999998753  1347999999999999999999999     8899999999999999554         


Q ss_pred             CCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCC
Q 013973          245 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA  321 (433)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~  321 (433)
                                        +.+||+|||.+.......   ....|++.|+|||++.+..++.++|+||||+++|+|++|..
T Consensus       147 ------------------~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~  208 (265)
T cd08217         147 ------------------NNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSP  208 (265)
T ss_pred             ------------------CCEEEecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCC
Confidence                              456666666655433222   22468999999999998889999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       322 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      ||...+..+....+.                       .+..                         ...+...+.++.+
T Consensus       209 p~~~~~~~~~~~~~~-----------------------~~~~-------------------------~~~~~~~~~~~~~  240 (265)
T cd08217         209 PFTARNQLQLASKIK-----------------------EGKF-------------------------RRIPYRYSSELNE  240 (265)
T ss_pred             cccCcCHHHHHHHHh-----------------------cCCC-------------------------CCCccccCHHHHH
Confidence            998765433222211                       1100                         0112245678999


Q ss_pred             HHHhccccCCCCCCCHHHHhcCCCC
Q 013973          402 LLQGLLRYDPTDRLTAREALRHPFF  426 (433)
Q Consensus       402 li~~~L~~dP~~R~ta~ell~hp~f  426 (433)
                      ++.+||+.+|++||++.+|++|||+
T Consensus       241 l~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         241 VIKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             HHHHHccCCcccCCCHHHHhhCCCC
Confidence            9999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=7.6e-41  Score=312.84  Aligned_cols=244  Identities=26%  Similarity=0.367  Sum_probs=193.6

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  176 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV  176 (433)
                      ++|++.+.||+|+||.||+|..+. +..+|+|.+.........+..|+.+++.+     +|++++++++++...+.+++|
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~iv   77 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAMSEEDFIEEAKVMMKL-----SHPKLVQLYGVCTQQKPLYIV   77 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCccHHHHHHHHHHHHHC-----CCCCceeEEEEEccCCCEEEE
Confidence            458999999999999999998764 45699998875444456678899999988     678999999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          177 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       177 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      |||+ +++|.+++.... ..+++..+..++.|++.||+|||++||+||||||+||+++.++.+                 
T Consensus        78 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~-----------------  139 (256)
T cd05114          78 TEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVV-----------------  139 (256)
T ss_pred             EEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeE-----------------
Confidence            9999 899999987643 368999999999999999999999999999999999999655544                 


Q ss_pred             cccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChHH
Q 013973          256 FKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  330 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~  330 (433)
                                ||+|||.+.......    ....++..|+|||++.+..++.++|+||||+++|||++ |+.||...+..+
T Consensus       140 ----------kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~  209 (256)
T cd05114         140 ----------KVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE  209 (256)
T ss_pred             ----------EECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence                      555555443221111    11234568999999998889999999999999999999 999998766555


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      .+..+....                      ...                          .+...+.++.+|+.+||+.|
T Consensus       210 ~~~~i~~~~----------------------~~~--------------------------~~~~~~~~~~~li~~c~~~~  241 (256)
T cd05114         210 VVEMISRGF----------------------RLY--------------------------RPKLASMTVYEVMYSCWHEK  241 (256)
T ss_pred             HHHHHHCCC----------------------CCC--------------------------CCCCCCHHHHHHHHHHccCC
Confidence            444332110                      000                          01234557899999999999


Q ss_pred             CCCCCCHHHHhc
Q 013973          411 PTDRLTAREALR  422 (433)
Q Consensus       411 P~~R~ta~ell~  422 (433)
                      |++||++.++++
T Consensus       242 p~~Rps~~~l~~  253 (256)
T cd05114         242 PEGRPTFAELLR  253 (256)
T ss_pred             cccCcCHHHHHH
Confidence            999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=9.9e-41  Score=312.86  Aligned_cols=253  Identities=27%  Similarity=0.451  Sum_probs=203.4

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      +|++.+.||+|++|.||+|.+..+++.||+|++....  .....+..|+..+..+     .|++++++++.+...+.+++
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~l   76 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSC-----ESPYVVKCYGAFYKEGEISI   76 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhc-----CCCCeeeEEEEEccCCeEEE
Confidence            5899999999999999999999999999999987543  3456677888888887     47889999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      ||||+ +++|.+++...  ..+++..+..++.|++.||.|||+ .|++|+||+|+||+++.+                  
T Consensus        77 v~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~------------------  136 (264)
T cd06623          77 VLEYMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSK------------------  136 (264)
T ss_pred             EEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCC------------------
Confidence            99999 79999999875  379999999999999999999999 999999999999999544                  


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                               +.++|+|||.+.......   ....++..|+|||.+.+..++.++|+||||+++|+|++|..||.......
T Consensus       137 ---------~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~  207 (264)
T cd06623         137 ---------GEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPS  207 (264)
T ss_pred             ---------CCEEEccCccceecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccC
Confidence                     456666666554332221   13468899999999999889999999999999999999999997764211


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCC-chhHHHHHHHhcccc
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH-SAGDLTHLLQGLLRY  409 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~  409 (433)
                      ....+......                   ...                          ..... ++..+.++|.+||..
T Consensus       208 ~~~~~~~~~~~-------------------~~~--------------------------~~~~~~~~~~l~~li~~~l~~  242 (264)
T cd06623         208 FFELMQAICDG-------------------PPP--------------------------SLPAEEFSPEFRDFISACLQK  242 (264)
T ss_pred             HHHHHHHHhcC-------------------CCC--------------------------CCCcccCCHHHHHHHHHHccC
Confidence            11111111000                   000                          01122 567899999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCC
Q 013973          410 DPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       410 dP~~R~ta~ell~hp~f~~~  429 (433)
                      +|++||++.|+++||||+..
T Consensus       243 ~p~~R~~~~~ll~~~~~~~~  262 (264)
T cd06623         243 DPKKRPSAAELLQHPFIKKA  262 (264)
T ss_pred             ChhhCCCHHHHHhCHHHHhc
Confidence            99999999999999999754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=3.4e-41  Score=320.78  Aligned_cols=259  Identities=22%  Similarity=0.344  Sum_probs=197.4

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      +|+..+.||+|+||.||++.+..+++.||+|.+....  .....+..|+.++.++.    .|++++++++.+...+..++
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~----~~~~iv~~~~~~~~~~~~~~   80 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSS----DCPYIVKFYGALFREGDCWI   80 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhc----CCCCEeeeeeEEecCCcEEE
Confidence            4777889999999999999999999999999986432  33445667888777762    36889999999999999999


Q ss_pred             EEecCCCCHHHHH---HhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          176 VFEKLGSSLYDFL---RKNNYRSFPIDLVREIARQLLECIAFMHDL-CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       176 V~e~~~~~L~~~l---~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      ||||+++++.++.   .......+++..+..++.|++.||+|||+. +|+||||||+|||+++                 
T Consensus        81 ~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~-----------------  143 (288)
T cd06616          81 CMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDR-----------------  143 (288)
T ss_pred             EEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEcc-----------------
Confidence            9999977765543   222335799999999999999999999975 9999999999999954                 


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCC--CCceeecCcccchhhhhCC---CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                                ++.++|+|||++......  .....||..|+|||++.+.   .++.++|||||||++|+|++|..||...
T Consensus       144 ----------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~  213 (288)
T cd06616         144 ----------NGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKW  213 (288)
T ss_pred             ----------CCcEEEeecchhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhc
Confidence                      445777777766533222  1234688999999999876   6899999999999999999999999754


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      ..  ....+.......+..                   .+                      ......++.++.+||.+|
T Consensus       214 ~~--~~~~~~~~~~~~~~~-------------------~~----------------------~~~~~~~~~~l~~li~~~  250 (288)
T cd06616         214 NS--VFDQLTQVVKGDPPI-------------------LS----------------------NSEEREFSPSFVNFINLC  250 (288)
T ss_pred             ch--HHHHHhhhcCCCCCc-------------------CC----------------------CcCCCccCHHHHHHHHHH
Confidence            31  111111111110000                   00                      001124677899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      |+.||++|||+.+++.||||.+..
T Consensus       251 l~~~p~~Rpt~~~i~~~~~~~~~~  274 (288)
T cd06616         251 LIKDESKRPKYKELLEHPFIKDYE  274 (288)
T ss_pred             ccCChhhCcCHHHHhcChhhhchh
Confidence            999999999999999999997643

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=1.5e-40  Score=316.17  Aligned_cols=251  Identities=27%  Similarity=0.444  Sum_probs=200.0

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  176 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV  176 (433)
                      .|...+.||+|++|.||++.+..+++.+|+|.+.... ...+.+..|+.+++.+     +|++++++++.+...+..++|
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~-----~h~~vv~~~~~~~~~~~~~~v   94 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDY-----QHPNIVEMYSSYLVGDELWVV   94 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHc-----CCCChheEEEEEEcCCeEEEE
Confidence            4666789999999999999999999999999886332 2334567788888877     678999999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          177 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       177 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      +||+ +++|.+++..   ..+++..+..++.|++.||+|||++||+||||||+||+++.++                   
T Consensus        95 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~-------------------  152 (285)
T cd06648          95 MEFLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDG-------------------  152 (285)
T ss_pred             EeccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCC-------------------
Confidence            9999 8999999877   2689999999999999999999999999999999999995544                   


Q ss_pred             cccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHH
Q 013973          256 FKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL  332 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~  332 (433)
                              .++|+|||.+......   .....|+..|+|||.+.+..++.++|+|||||++|+|++|..||...+..+..
T Consensus       153 --------~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~  224 (285)
T cd06648         153 --------RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAM  224 (285)
T ss_pred             --------cEEEcccccchhhccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHH
Confidence                    4555566554322211   12246889999999999888999999999999999999999999765544433


Q ss_pred             HHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCC
Q 013973          333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPT  412 (433)
Q Consensus       333 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  412 (433)
                      ..+.....+..                                              ......+..+.+||.+||+.||+
T Consensus       225 ~~~~~~~~~~~----------------------------------------------~~~~~~~~~l~~li~~~l~~~p~  258 (285)
T cd06648         225 KRIRDNLPPKL----------------------------------------------KNLHKVSPRLRSFLDRMLVRDPA  258 (285)
T ss_pred             HHHHhcCCCCC----------------------------------------------cccccCCHHHHHHHHHHcccChh
Confidence            32211100000                                              00123566899999999999999


Q ss_pred             CCCCHHHHhcCCCCCCC
Q 013973          413 DRLTAREALRHPFFTRD  429 (433)
Q Consensus       413 ~R~ta~ell~hp~f~~~  429 (433)
                      +||++.++++||||+..
T Consensus       259 ~Rpt~~~il~~~~~~~~  275 (285)
T cd06648         259 QRATAAELLNHPFLAKA  275 (285)
T ss_pred             hCcCHHHHccCcccccC
Confidence            99999999999999764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.9e-41  Score=316.71  Aligned_cols=254  Identities=22%  Similarity=0.377  Sum_probs=200.5

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      .|++.+.||+|+||.||+|.+..+++.||+|.++..  ......+..|+.+++.+.+  ..|++++++++.+......|+
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~--~~~~~vi~~~~~~~~~~~~~l   79 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQ--SQPPNITKYYGSYLKGPRLWI   79 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhcc--CCCCCeeeEeeeeeeCCEEEE
Confidence            478899999999999999999999999999998642  2334566788999888854  246899999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      ||||+ +++|.+++...   .+++..+..++.|++.||.|||+.||+|+||+|+||++++++                  
T Consensus        80 v~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~------------------  138 (277)
T cd06917          80 IMEYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTG------------------  138 (277)
T ss_pred             EEecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCC------------------
Confidence            99999 88999998653   689999999999999999999999999999999999995544                  


Q ss_pred             ccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                               .++|+|||.+......   .....|+..|+|||.+.+ ..++.++|+|||||++|+|++|..||...+...
T Consensus       139 ---------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~  209 (277)
T cd06917         139 ---------NVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR  209 (277)
T ss_pred             ---------CEEEccCCceeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh
Confidence                     5666666655433222   122468899999999875 457899999999999999999999997654332


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+..   ..+                   ...+                         ....+.++.+++.+||+.|
T Consensus       210 ~~~~~~~---~~~-------------------~~~~-------------------------~~~~~~~~~~~i~~~l~~~  242 (277)
T cd06917         210 AMMLIPK---SKP-------------------PRLE-------------------------DNGYSKLLREFVAACLDEE  242 (277)
T ss_pred             hhhcccc---CCC-------------------CCCC-------------------------cccCCHHHHHHHHHHcCCC
Confidence            2111000   000                   0000                         0124668999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCCC
Q 013973          411 PTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       411 P~~R~ta~ell~hp~f~~~~  430 (433)
                      |++||++.|++.|+||++..
T Consensus       243 p~~R~~~~~il~~~~~~~~~  262 (277)
T cd06917         243 PKERLSAEELLKSKWIKAHS  262 (277)
T ss_pred             cccCcCHHHHhhChHhhccc
Confidence            99999999999999997654

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=1.5e-40  Score=314.60  Aligned_cols=251  Identities=22%  Similarity=0.322  Sum_probs=198.8

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECC-----CCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRE-----RKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~-----~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      .++|++.+.||+|+||.||+|.+..     ++..||+|.+...  ......+..|+.+++.+     .|++++++++++.
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~   79 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKF-----NHQNIVRLIGVSF   79 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEc
Confidence            3569999999999999999999987     7788999988633  22334567788888887     6789999999998


Q ss_pred             cCCeEEEEEecC-CCCHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCC
Q 013973          169 YRNHICIVFEKL-GSSLYDFLRKNNY-----RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPD  242 (433)
Q Consensus       169 ~~~~~~lV~e~~-~~~L~~~l~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~d  242 (433)
                      +.+..++||||+ |++|.+++.....     ..+++..+..++.||+.||+|||+++++||||||+|||++.++      
T Consensus        80 ~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~------  153 (277)
T cd05036          80 ERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKG------  153 (277)
T ss_pred             cCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccC------
Confidence            889999999999 9999999976532     2589999999999999999999999999999999999996543      


Q ss_pred             CcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCC-----ceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHH
Q 013973          243 YKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN-----YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC  317 (433)
Q Consensus       243 fg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ell  317 (433)
                                        ....+||+|||+++.......     ...++..|+|||++.+..++.++|||||||++|||+
T Consensus       154 ------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~  215 (277)
T cd05036         154 ------------------PGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIF  215 (277)
T ss_pred             ------------------CCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHH
Confidence                              123577777777764422111     112356799999999889999999999999999999


Q ss_pred             h-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCch
Q 013973          318 T-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA  396 (433)
Q Consensus       318 t-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (433)
                      + |..||...+..+....+...                      ....                          .+..++
T Consensus       216 ~~g~~pf~~~~~~~~~~~~~~~----------------------~~~~--------------------------~~~~~~  247 (277)
T cd05036         216 SLGYMPYPGRTNQEVMEFVTGG----------------------GRLD--------------------------PPKGCP  247 (277)
T ss_pred             cCCCCCCCCCCHHHHHHHHHcC----------------------CcCC--------------------------CCCCCC
Confidence            7 99999876655433322110                      0000                          122456


Q ss_pred             hHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          397 GDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       397 ~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                      ..+.+++.+||+.||++||++.+|++|
T Consensus       248 ~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         248 GPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            789999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=1.3e-41  Score=321.80  Aligned_cols=248  Identities=30%  Similarity=0.452  Sum_probs=197.8

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      .|+..+.||+|+||.||+|.+..+++.||+|+++..  ......+..|+.+++.+     .|++++++++.+.....+|+
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~l   79 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQC-----DSPYITRYYGSYLKGTKLWI   79 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcC-----CCCccHhhhcccccCCceEE
Confidence            477788999999999999999999999999998633  23345567788888877     67899999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      ||||+ +++|.+++...   .+++..+..++.||+.||.|||++||+|+||+|+||++++++                  
T Consensus        80 v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~------------------  138 (277)
T cd06642          80 IMEYLGGGSALDLLKPG---PLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQG------------------  138 (277)
T ss_pred             EEEccCCCcHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCC------------------
Confidence            99999 88999988653   689999999999999999999999999999999999996554                  


Q ss_pred             ccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                               .++|+|||++.......   ....|+..|+|||++.+..++.++|+|||||++|||++|..||........
T Consensus       139 ---------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~  209 (277)
T cd06642         139 ---------DVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV  209 (277)
T ss_pred             ---------CEEEccccccccccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH
Confidence                     45555555554322211   223578899999999998899999999999999999999999975443322


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      ...+.                       .+..  +                       ......+.++.++|.+||+.+|
T Consensus       210 ~~~~~-----------------------~~~~--~-----------------------~~~~~~~~~~~~li~~~l~~~p  241 (277)
T cd06642         210 LFLIP-----------------------KNSP--P-----------------------TLEGQYSKPFKEFVEACLNKDP  241 (277)
T ss_pred             Hhhhh-----------------------cCCC--C-----------------------CCCcccCHHHHHHHHHHccCCc
Confidence            21110                       0000  0                       0012345678999999999999


Q ss_pred             CCCCCHHHHhcCCCCCC
Q 013973          412 TDRLTAREALRHPFFTR  428 (433)
Q Consensus       412 ~~R~ta~ell~hp~f~~  428 (433)
                      ++||++.++++||||..
T Consensus       242 ~~Rp~~~~il~~~~~~~  258 (277)
T cd06642         242 RFRPTAKELLKHKFITR  258 (277)
T ss_pred             ccCcCHHHHHHhHHHHH
Confidence            99999999999999964

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-42  Score=332.39  Aligned_cols=234  Identities=24%  Similarity=0.362  Sum_probs=191.3

Q ss_pred             EEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecC
Q 013973          101 IHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  180 (433)
Q Consensus       101 ~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~  180 (433)
                      -++-||+|+.|.||+|+.+  ++.||||.++.      .-..+|+-|++|     .|+||+.+.++|.....+|||||||
T Consensus       128 ELeWlGSGaQGAVF~Grl~--netVAVKKV~e------lkETdIKHLRkL-----kH~NII~FkGVCtqsPcyCIiMEfC  194 (904)
T KOG4721|consen  128 ELEWLGSGAQGAVFLGRLH--NETVAVKKVRE------LKETDIKHLRKL-----KHPNIITFKGVCTQSPCYCIIMEFC  194 (904)
T ss_pred             hhhhhccCcccceeeeecc--CceehhHHHhh------hhhhhHHHHHhc-----cCcceeeEeeeecCCceeEEeeecc
Confidence            3466999999999999764  67899997652      223467777777     7799999999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccC
Q 013973          181 -GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM  259 (433)
Q Consensus       181 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~  259 (433)
                       .|-|.+.|+...  .++......|..+|+.|+.|||.+.|||||||.-||||..+                        
T Consensus       195 a~GqL~~VLka~~--~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~------------------------  248 (904)
T KOG4721|consen  195 AQGQLYEVLKAGR--PITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYD------------------------  248 (904)
T ss_pred             ccccHHHHHhccC--ccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeecc------------------------
Confidence             999999998764  89999999999999999999999999999999999999544                        


Q ss_pred             CCCCCEEEEecCCccccCCC--CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 013973          260 PKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER  337 (433)
Q Consensus       260 ~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~i~~  337 (433)
                         ..+||+|||-++.....  ...++||..|||||+|..++.+.|+|||||||||||||||..||...+...++    -
T Consensus       249 ---d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAII----w  321 (904)
T KOG4721|consen  249 ---DVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAII----W  321 (904)
T ss_pred             ---ceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeE----E
Confidence               45666666666544333  23479999999999999999999999999999999999999999865432211    0


Q ss_pred             HhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCH
Q 013973          338 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  417 (433)
Q Consensus       338 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta  417 (433)
                      ..|..                                           .+....+..++.-++-||+.||+-.|..||+.
T Consensus       322 GVGsN-------------------------------------------sL~LpvPstcP~GfklL~Kqcw~sKpRNRPSF  358 (904)
T KOG4721|consen  322 GVGSN-------------------------------------------SLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSF  358 (904)
T ss_pred             eccCC-------------------------------------------cccccCcccCchHHHHHHHHHHhcCCCCCccH
Confidence            01110                                           11233456788889999999999999999999


Q ss_pred             HHHhcC
Q 013973          418 REALRH  423 (433)
Q Consensus       418 ~ell~h  423 (433)
                      .++|.|
T Consensus       359 rqil~H  364 (904)
T KOG4721|consen  359 RQILLH  364 (904)
T ss_pred             HHHHHH
Confidence            999998

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=4.7e-41  Score=318.23  Aligned_cols=246  Identities=22%  Similarity=0.352  Sum_probs=194.7

Q ss_pred             CcEEEEeeeeccccEEEEEEEECC-----CCeEEEEEEeecchh--hHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRE-----RKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      ++|.+.+.||+|+||.||+|.+..     +++.||+|+++....  ....+..|+++++.+     .|++++++++.+..
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~   79 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNF-----QHENIVKFYGVCTE   79 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhc-----CCCCchheeeEEec
Confidence            568999999999999999998753     357899999874322  346778899999888     56889999999999


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcC------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNN------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSE  236 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~------------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~  236 (433)
                      ....++||||+ +++|.+++...+            ...+++..+..++.|++.||.|||++||+||||||+|||++.++
T Consensus        80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~  159 (280)
T cd05049          80 GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDL  159 (280)
T ss_pred             CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCC
Confidence            99999999999 999999997643            23578899999999999999999999999999999999996655


Q ss_pred             ccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhCCCCCCcchhHHHHH
Q 013973          237 YIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGC  311 (433)
Q Consensus       237 ~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv  311 (433)
                      .++++|||                           .+......     .....++..|+|||++.+..++.++|||||||
T Consensus       160 ~~kl~d~g---------------------------~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~  212 (280)
T cd05049         160 VVKIGDFG---------------------------MSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGV  212 (280)
T ss_pred             eEEECCcc---------------------------cceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHH
Confidence            55555554                           44322111     11224578899999999999999999999999


Q ss_pred             HHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhh
Q 013973          312 ILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ  390 (433)
Q Consensus       312 ~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (433)
                      ++|||++ |..||...+..+....+.                       .+...                         .
T Consensus       213 il~e~~~~g~~p~~~~~~~~~~~~~~-----------------------~~~~~-------------------------~  244 (280)
T cd05049         213 VLWEIFTYGKQPWYGLSNEEVIECIT-----------------------QGRLL-------------------------Q  244 (280)
T ss_pred             HHHHHHhcCCCCCCCCCHHHHHHHHH-----------------------cCCcC-------------------------C
Confidence            9999998 999998766554433321                       11110                         0


Q ss_pred             hcCCchhHHHHHHHhccccCCCCCCCHHHHhc
Q 013973          391 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       391 ~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                      .+...+..+.+|+.+||+.||++||++.|+++
T Consensus       245 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         245 RPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            11245678999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=1.2e-40  Score=315.28  Aligned_cols=249  Identities=29%  Similarity=0.431  Sum_probs=200.0

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      -|++.+.||.|+||.||+|.+..+++.||+|++...  ......+..|+.++..+     .|++++++++.+..+..+++
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~~l   79 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-----DSPYVTKYYGSYLKDTKLWI   79 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhc-----CCCCEeEEEEEEEeCCeEEE
Confidence            378899999999999999999999999999987632  23345567788888877     67899999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      ||||+ +++|.+++...   .+++..+..++.|++.||.|||+.||+|+||||+||+++.+                   
T Consensus        80 v~e~~~~~~l~~~i~~~---~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~-------------------  137 (277)
T cd06641          80 IMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEH-------------------  137 (277)
T ss_pred             EEEeCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCC-------------------
Confidence            99999 88999998653   68999999999999999999999999999999999999544                   


Q ss_pred             ccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                              +.++|+|||.+......   .....|+..|+|||.+.+..++.++|+|||||++|+|++|..||........
T Consensus       138 --------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~  209 (277)
T cd06641         138 --------GEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKV  209 (277)
T ss_pred             --------CCEEEeecccceecccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHH
Confidence                    45666666655433221   1224678899999999888889999999999999999999999976544332


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      ...+..  +..                       +                       ......+.++.+++.+||+.+|
T Consensus       210 ~~~~~~--~~~-----------------------~-----------------------~~~~~~~~~~~~~i~~~l~~~p  241 (277)
T cd06641         210 LFLIPK--NNP-----------------------P-----------------------TLEGNYSKPLKEFVEACLNKEP  241 (277)
T ss_pred             HHHHhc--CCC-----------------------C-----------------------CCCcccCHHHHHHHHHHccCCh
Confidence            222110  000                       0                       0112456789999999999999


Q ss_pred             CCCCCHHHHhcCCCCCCC
Q 013973          412 TDRLTAREALRHPFFTRD  429 (433)
Q Consensus       412 ~~R~ta~ell~hp~f~~~  429 (433)
                      .+||++.++++||||.+.
T Consensus       242 ~~Rp~~~~~l~~~~~~~~  259 (277)
T cd06641         242 SFRPTAKELLKHKFIVRF  259 (277)
T ss_pred             hhCcCHHHHHhCHHHhhh
Confidence            999999999999999754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=2.2e-40  Score=315.36  Aligned_cols=255  Identities=23%  Similarity=0.338  Sum_probs=195.7

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECC-----CCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEeccee
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRE-----RKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  167 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~  167 (433)
                      ..++|++.+.||+|+||.||+|..+.     .+..||+|.++...  .....+..|+.+++.+     +|++++++++.+
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~   78 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF-----TCHHVVRLLGVV   78 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhC-----CCCCeeeEEEEE
Confidence            35689999999999999999997652     34579999886432  2233456788888877     668899999999


Q ss_pred             ecCCeEEEEEecC-CCCHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCcc
Q 013973          168 DYRNHICIVFEKL-GSSLYDFLRKNN--------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI  238 (433)
Q Consensus       168 ~~~~~~~lV~e~~-~~~L~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~  238 (433)
                      ......|+||||+ +|+|.+++....        ...++...+..++.||+.||.|||+++|+||||||+|||+++++. 
T Consensus        79 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~-  157 (288)
T cd05061          79 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFT-  157 (288)
T ss_pred             cCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCc-
Confidence            9999999999999 899999997532        123567788999999999999999999999999999999965554 


Q ss_pred             ccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHHHHH
Q 013973          239 KVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL  313 (433)
Q Consensus       239 ~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l  313 (433)
                                                ++|+|||+++......     ....++..|+|||.+.+..++.++|+|||||++
T Consensus       158 --------------------------~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l  211 (288)
T cd05061         158 --------------------------VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL  211 (288)
T ss_pred             --------------------------EEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHH
Confidence                                      5555555544221111     112456789999999988899999999999999


Q ss_pred             HHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhc
Q 013973          314 VELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV  392 (433)
Q Consensus       314 ~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (433)
                      |||++ |..||.+....+....+..                      .+...                          .+
T Consensus       212 ~el~~~~~~p~~~~~~~~~~~~~~~----------------------~~~~~--------------------------~~  243 (288)
T cd05061         212 WEITSLAEQPYQGLSNEQVLKFVMD----------------------GGYLD--------------------------QP  243 (288)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHc----------------------CCCCC--------------------------CC
Confidence            99998 7899987655443332110                      00000                          11


Q ss_pred             CCchhHHHHHHHhccccCCCCCCCHHHHhc------CCCCCCC
Q 013973          393 DHSAGDLTHLLQGLLRYDPTDRLTAREALR------HPFFTRD  429 (433)
Q Consensus       393 ~~~~~~~~~li~~~L~~dP~~R~ta~ell~------hp~f~~~  429 (433)
                      ...+..+.+++.+||+.||++|||+.++++      ||||...
T Consensus       244 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~  286 (288)
T cd05061         244 DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV  286 (288)
T ss_pred             CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence            234568999999999999999999999987      9999864

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=1.2e-40  Score=349.57  Aligned_cols=269  Identities=20%  Similarity=0.276  Sum_probs=198.6

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++.++||+|+||.||+|++..+++.||+|+++..    ....+.+..|+.+++.+     .|+|++++++.+.+.+.
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L-----~HPNIVkl~~v~~d~~~   76 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADL-----IHPGIVPVYSICSDGDP   76 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhC-----CCcCcCeEEEEEeeCCE
Confidence            5799999999999999999999999999999998632    23345677899999888     67899999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcC---------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNN---------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPD  242 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~---------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~d  242 (433)
                      .|+||||+ |++|.+++....         ...+++..+..++.||+.||+|||++|||||||||+|||++.+|.++|+|
T Consensus        77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiD  156 (932)
T PRK13184         77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILD  156 (932)
T ss_pred             EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEe
Confidence            99999999 999999986421         12356677889999999999999999999999999999998888777777


Q ss_pred             CcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCC
Q 013973          243 YKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL  322 (433)
Q Consensus       243 fg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P  322 (433)
                      ||++..........      .......-+............+||+.|||||++.+..++.++|||||||++|||++|..|
T Consensus       157 FGLAk~i~~~~~~~------~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~P  230 (932)
T PRK13184        157 WGAAIFKKLEEEDL------LDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFP  230 (932)
T ss_pred             cCcceecccccccc------cccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCC
Confidence            77766442211100      000000000000000111235799999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       323 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      |...+.......  ... ..|..                                           .......++.+.++
T Consensus       231 F~~~~~~ki~~~--~~i-~~P~~-------------------------------------------~~p~~~iP~~L~~L  264 (932)
T PRK13184        231 YRRKKGRKISYR--DVI-LSPIE-------------------------------------------VAPYREIPPFLSQI  264 (932)
T ss_pred             CCCcchhhhhhh--hhc-cChhh-------------------------------------------ccccccCCHHHHHH
Confidence            976443221110  000 00000                                           00012456788999


Q ss_pred             HHhccccCCCCCCCHHHHhc
Q 013973          403 LQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       403 i~~~L~~dP~~R~ta~ell~  422 (433)
                      +.+||+.||++|++..+.+.
T Consensus       265 I~rcL~~DP~kR~ss~eeLl  284 (932)
T PRK13184        265 AMKALAVDPAERYSSVQELK  284 (932)
T ss_pred             HHHHccCChhhCcCHHHHHH
Confidence            99999999999987665553

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2e-40  Score=310.87  Aligned_cols=246  Identities=24%  Similarity=0.344  Sum_probs=196.1

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      .++|++.+.||+|+||.||+|.+.. ++.||+|.++......+.+..|+.+++++     .|++++++++++...+..|+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~l   78 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWNN-TTPVAVKTLKPGTMDPKDFLAEAQIMKKL-----RHPKLIQLYAVCTLEEPIYI   78 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEecC-CeEEEEEeeCCCcccHHHHHHHHHHHHHC-----CCCCccceeEEEecCCCeee
Confidence            3579999999999999999998754 46799999875544456678899999988     56889999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      ||||+ +++|.+++.......+++..+..++.|++.||.|||+.||+||||||+||++++++                  
T Consensus        79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~------------------  140 (261)
T cd05068          79 VTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENN------------------  140 (261)
T ss_pred             eeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCC------------------
Confidence            99999 99999999876555799999999999999999999999999999999999996554                  


Q ss_pred             ccccCCCCCCEEEEecCCccccCCCC-Cc---eeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPDQ-NY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  329 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~---~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~  329 (433)
                               .++|+|||++....... ..   ..++..|+|||++.+..++.++|+||||+++|||++ |+.||.+.+..
T Consensus       141 ---------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~  211 (261)
T cd05068         141 ---------ICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA  211 (261)
T ss_pred             ---------CEEECCcceEEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence                     45555555554332111 01   122457999999998899999999999999999999 99999876655


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      .....+....                      ..                          ..+...+..+.+++.+||+.
T Consensus       212 ~~~~~~~~~~----------------------~~--------------------------~~~~~~~~~~~~li~~~l~~  243 (261)
T cd05068         212 EVLQQVDQGY----------------------RM--------------------------PCPPGCPKELYDIMLDCWKE  243 (261)
T ss_pred             HHHHHHHcCC----------------------CC--------------------------CCCCcCCHHHHHHHHHHhhc
Confidence            4443322110                      00                          01123466899999999999


Q ss_pred             CCCCCCCHHHHhc
Q 013973          410 DPTDRLTAREALR  422 (433)
Q Consensus       410 dP~~R~ta~ell~  422 (433)
                      ||++||++.++++
T Consensus       244 ~P~~Rp~~~~l~~  256 (261)
T cd05068         244 DPDDRPTFETLQW  256 (261)
T ss_pred             CcccCCCHHHHHH
Confidence            9999999999874

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=6.3e-40  Score=304.47  Aligned_cols=249  Identities=29%  Similarity=0.502  Sum_probs=204.6

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh-hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  176 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV  176 (433)
                      +|.+.+.||+|++|.||++.+..+++.|++|++..... ....+..|+++++.+     .|++++++.+.+......+++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~l~   75 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKC-----KHPNIVKYYGSYLKKDELWIV   75 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhC-----CCCCEeEEEEEEecCCeEEEE
Confidence            37889999999999999999998999999999875432 556677888888888     568899999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          177 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       177 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      +||+ +++|.+++.... ..+++..+..++.|++.||.|||+.|++|+||+|+||+++                      
T Consensus        76 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~----------------------  132 (253)
T cd05122          76 MEFCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLT----------------------  132 (253)
T ss_pred             EecCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEc----------------------
Confidence            9999 799999987753 4799999999999999999999999999999999999994                      


Q ss_pred             cccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 013973          256 FKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA  333 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~  333 (433)
                           .++.++|+|||.+.......  ....|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+..+...
T Consensus       133 -----~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~  207 (253)
T cd05122         133 -----SDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALF  207 (253)
T ss_pred             -----cCCeEEEeeccccccccccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHH
Confidence                 44567888888776555443  44578999999999998889999999999999999999999998765433332


Q ss_pred             HHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCC
Q 013973          334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  413 (433)
Q Consensus       334 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  413 (433)
                      .+...  ..+                    ..+                        ....++.++.++|.+||+.||++
T Consensus       208 ~~~~~--~~~--------------------~~~------------------------~~~~~~~~~~~~i~~~l~~~p~~  241 (253)
T cd05122         208 KIATN--GPP--------------------GLR------------------------NPEKWSDEFKDFLKKCLQKNPEK  241 (253)
T ss_pred             HHHhc--CCC--------------------CcC------------------------cccccCHHHHHHHHHHccCChhh
Confidence            21110  000                    000                        01123568999999999999999


Q ss_pred             CCCHHHHhcCCC
Q 013973          414 RLTAREALRHPF  425 (433)
Q Consensus       414 R~ta~ell~hp~  425 (433)
                      |||+.|+++|||
T Consensus       242 R~t~~~~l~~~~  253 (253)
T cd05122         242 RPTAEQLLKHPF  253 (253)
T ss_pred             CCCHHHHhcCCC
Confidence            999999999999

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=4.2e-40  Score=317.38  Aligned_cols=254  Identities=25%  Similarity=0.377  Sum_probs=202.1

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      +.|...++||+|+||.||+|.+..+++.||+|++....    .....+..|+++++.+     .|++++++++.+.+...
T Consensus        21 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~   95 (313)
T cd06633          21 EIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQL-----KHPNTIEYKGCYLKEHT   95 (313)
T ss_pred             HHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhC-----CCCCCccEEEEEEeCCE
Confidence            34777889999999999999999999999999986321    2234466788888887     67889999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          173 ICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       173 ~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      .|+||||+.++|.+++.... ..+++..+..++.||+.||.|||++||+|+||||+||+++.                  
T Consensus        96 ~~lv~e~~~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~------------------  156 (313)
T cd06633          96 AWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTE------------------  156 (313)
T ss_pred             EEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECC------------------
Confidence            99999999888988887543 46899999999999999999999999999999999999944                  


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhh---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCChH
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHENL  329 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~  329 (433)
                               ++.++|+|||++..... .....|+..|+|||++.   ...++.++|+|||||++|+|++|..||...+..
T Consensus       157 ---------~~~~kL~dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~  226 (313)
T cd06633         157 ---------PGQVKLADFGSASKSSP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM  226 (313)
T ss_pred             ---------CCCEEEeecCCCcccCC-CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH
Confidence                     44577777776653322 23457899999999985   356889999999999999999999999876654


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      .....+...  ..+.                    .                         ....++..+++|+.+||+.
T Consensus       227 ~~~~~~~~~--~~~~--------------------~-------------------------~~~~~~~~l~~li~~~l~~  259 (313)
T cd06633         227 SALYHIAQN--DSPT--------------------L-------------------------QSNEWTDSFRGFVDYCLQK  259 (313)
T ss_pred             HHHHHHHhc--CCCC--------------------C-------------------------CccccCHHHHHHHHHHccC
Confidence            443332111  0000                    0                         0123455789999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCCC
Q 013973          410 DPTDRLTAREALRHPFFTRDHL  431 (433)
Q Consensus       410 dP~~R~ta~ell~hp~f~~~~~  431 (433)
                      +|.+||++.+++.||||...+.
T Consensus       260 ~P~~Rp~~~~~l~~~~~~~~~~  281 (313)
T cd06633         260 IPQERPASAELLRHDFVRRDRP  281 (313)
T ss_pred             ChhhCcCHHHHhcCcccCCCch
Confidence            9999999999999999987653

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=2.2e-40  Score=309.95  Aligned_cols=245  Identities=22%  Similarity=0.331  Sum_probs=193.1

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  176 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV  176 (433)
                      ++|.+.+.||+|+||.||+|.... +..+|+|.++......+.+..|+.+++.+     +|++|+++++++.....+++|
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv   77 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMKL-----SHEKLVQLYGVCTKQRPIYIV   77 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccHHHHHHHHHHHhcC-----CCCCeeeEEEEEccCCCcEEE
Confidence            469999999999999999998754 44599998875444456678899988887     678999999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          177 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       177 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      |||+ +++|.+++.... ..+++..+..++.||+.||.|||+.||+|+||||+|||++.++.                  
T Consensus        78 ~e~~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~------------------  138 (256)
T cd05113          78 TEYMSNGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGC------------------  138 (256)
T ss_pred             EEcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCC------------------
Confidence            9999 889999998654 36899999999999999999999999999999999999965554                  


Q ss_pred             cccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChHH
Q 013973          256 FKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  330 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~  330 (433)
                               +||+|||.+.......    ....++..|+|||++.+..++.++|+|||||++|+|++ |..||...+..+
T Consensus       139 ---------~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~  209 (256)
T cd05113         139 ---------VKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE  209 (256)
T ss_pred             ---------EEECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH
Confidence                     5555555443222111    11235677999999998889999999999999999998 999998766544


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+...                       ....                         .+...+..+.+++.+||+.|
T Consensus       210 ~~~~~~~~-----------------------~~~~-------------------------~~~~~~~~~~~li~~cl~~~  241 (256)
T cd05113         210 TVEKVSQG-----------------------LRLY-------------------------RPHLASEKVYAIMYSCWHEK  241 (256)
T ss_pred             HHHHHhcC-----------------------CCCC-------------------------CCCCCCHHHHHHHHHHcCCC
Confidence            33322111                       0000                         01234568899999999999


Q ss_pred             CCCCCCHHHHhcC
Q 013973          411 PTDRLTAREALRH  423 (433)
Q Consensus       411 P~~R~ta~ell~h  423 (433)
                      |.+||++.+++.+
T Consensus       242 p~~Rp~~~~ll~~  254 (256)
T cd05113         242 AEERPTFQQLLSS  254 (256)
T ss_pred             cccCCCHHHHHHh
Confidence            9999999999864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=2.2e-40  Score=310.99  Aligned_cols=245  Identities=27%  Similarity=0.348  Sum_probs=191.8

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      .++|++.++||+|+||.||+|.+..++ .||+|+++......+.+..|+.+++.+     .|++++++++.+. ....++
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~-~valK~~~~~~~~~~~~~~E~~~l~~l-----~~~~i~~~~~~~~-~~~~~l   77 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKL-----RHEKLVQLYAVVS-EEPIYI   77 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCCc-eEEEEecccCccCHHHHHHHHHHHHhC-----CCCCcceEEEEEC-CCCcEE
Confidence            357999999999999999999887664 599999975444456678899999887     5688999988775 456899


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      ||||+ +++|.+++.......+++..+..++.|++.||+|||+.+|+||||||+||++++++                  
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~------------------  139 (262)
T cd05071          78 VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL------------------  139 (262)
T ss_pred             EEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCC------------------
Confidence            99999 88999999865445689999999999999999999999999999999999996544                  


Q ss_pred             ccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  329 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~  329 (433)
                               .++|+|||.+.......    ....++..|+|||++.+..++.++|+|||||++|+|++ |..||.+....
T Consensus       140 ---------~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~  210 (262)
T cd05071         140 ---------VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR  210 (262)
T ss_pred             ---------cEEeccCCceeeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH
Confidence                     45555555554322211    11245678999999998889999999999999999999 88999876554


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +....+....                      .  .                        ......+..+.+|+.+||+.
T Consensus       211 ~~~~~~~~~~----------------------~--~------------------------~~~~~~~~~l~~li~~~l~~  242 (262)
T cd05071         211 EVLDQVERGY----------------------R--M------------------------PCPPECPESLHDLMCQCWRK  242 (262)
T ss_pred             HHHHHHhcCC----------------------C--C------------------------CCccccCHHHHHHHHHHccC
Confidence            4333221100                      0  0                        00123566789999999999


Q ss_pred             CCCCCCCHHHHhc
Q 013973          410 DPTDRLTAREALR  422 (433)
Q Consensus       410 dP~~R~ta~ell~  422 (433)
                      ||++||++.++++
T Consensus       243 ~p~~Rp~~~~~~~  255 (262)
T cd05071         243 EPEERPTFEYLQA  255 (262)
T ss_pred             CcccCCCHHHHHH
Confidence            9999999998865

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=3.2e-40  Score=312.33  Aligned_cols=249  Identities=22%  Similarity=0.330  Sum_probs=192.1

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEEC-----CCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEeccee
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  167 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~-----~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~  167 (433)
                      ..++|++.+.||+|+||.||+|.++     .++..||+|++....  .....+..|+.+++.+     +|+||+++++++
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~iv~~~~~~   78 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-----NCHHVVRLLGVV   78 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhC-----CCCCeeeEEEEE
Confidence            4578999999999999999999864     245679999886422  2344567788888877     678899999999


Q ss_pred             ecCCeEEEEEecC-CCCHHHHHHhcCC--------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCcc
Q 013973          168 DYRNHICIVFEKL-GSSLYDFLRKNNY--------RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI  238 (433)
Q Consensus       168 ~~~~~~~lV~e~~-~~~L~~~l~~~~~--------~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~  238 (433)
                      ......++||||+ +++|.+++.....        ..+++..+..++.|++.||.|||+.|++|+||||+|||+++++. 
T Consensus        79 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~-  157 (277)
T cd05062          79 SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT-  157 (277)
T ss_pred             cCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCC-
Confidence            9999999999999 8999999975321        23577889999999999999999999999999999999965554 


Q ss_pred             ccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHHHHH
Q 013973          239 KVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL  313 (433)
Q Consensus       239 ~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l  313 (433)
                                                ++|+|||++.......     ....++..|+|||++.+..++.++|||||||++
T Consensus       158 --------------------------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l  211 (277)
T cd05062         158 --------------------------VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL  211 (277)
T ss_pred             --------------------------EEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHH
Confidence                                      4555555443221111     112457789999999998999999999999999


Q ss_pred             HHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhc
Q 013973          314 VELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV  392 (433)
Q Consensus       314 ~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (433)
                      |||++ |..||.+....+....+..                      .+...                          .+
T Consensus       212 ~el~~~~~~p~~~~~~~~~~~~~~~----------------------~~~~~--------------------------~~  243 (277)
T cd05062         212 WEIATLAEQPYQGMSNEQVLRFVME----------------------GGLLD--------------------------KP  243 (277)
T ss_pred             HHHHcCCCCCCCCCCHHHHHHHHHc----------------------CCcCC--------------------------CC
Confidence            99999 7899987655443332111                      00000                          11


Q ss_pred             CCchhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          393 DHSAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       393 ~~~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                      ...+..+.+++.+||+.||++|||+.|++++
T Consensus       244 ~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         244 DNCPDMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            2456689999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=1.8e-40  Score=310.97  Aligned_cols=244  Identities=30%  Similarity=0.534  Sum_probs=196.1

Q ss_pred             eeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecC
Q 013973          105 MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  180 (433)
Q Consensus       105 iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~  180 (433)
                      ||.|+||.||+|++..+++.||+|++....    .....+..|+.+++.+     .|+|++++++.+......|+||||+
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~~~~~~~~~~~~~~lv~e~~   75 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQA-----QSPYVVKLYYSFQGKKNLYLVMEYL   75 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhC-----CCcchhHHHHheecCcEEEEEEecC
Confidence            689999999999999999999999986432    2344566778888777     5688999999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccC
Q 013973          181 -GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM  259 (433)
Q Consensus       181 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~  259 (433)
                       +++|.+++...+  .+++..+..++.||+.||.|||+.||+|+||+|+||+++.++                       
T Consensus        76 ~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~-----------------------  130 (265)
T cd05579          76 PGGDLASLLENVG--SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNG-----------------------  130 (265)
T ss_pred             CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCC-----------------------
Confidence             889999998755  799999999999999999999999999999999999996554                       


Q ss_pred             CCCCCEEEEecCCccccCCC-----------CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          260 PKSSAIKVIDFGSTTYERPD-----------QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       260 ~~~~~~kl~Dfg~a~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                          .++|+|||++......           .....++..|+|||.+....++.++|+||||+++|+|++|..||.....
T Consensus       131 ----~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~  206 (265)
T cd05579         131 ----HLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP  206 (265)
T ss_pred             ----CEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH
Confidence                4555555554432211           1234678899999999988899999999999999999999999987665


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      .+....+..                       +...++..                        ...+..+.+|+.+||+
T Consensus       207 ~~~~~~~~~-----------------------~~~~~~~~------------------------~~~~~~~~~~i~~~l~  239 (265)
T cd05579         207 EEIFQNILN-----------------------GKIEWPED------------------------VEVSDEAIDLISKLLV  239 (265)
T ss_pred             HHHHHHHhc-----------------------CCcCCCcc------------------------ccCCHHHHHHHHHHhc
Confidence            444332211                       11222210                        0136688999999999


Q ss_pred             cCCCCCCCH---HHHhcCCCCCCC
Q 013973          409 YDPTDRLTA---REALRHPFFTRD  429 (433)
Q Consensus       409 ~dP~~R~ta---~ell~hp~f~~~  429 (433)
                      .||++|||+   .++|+||||++-
T Consensus       240 ~~p~~Rpt~~~~~~~l~~~~~~~~  263 (265)
T cd05579         240 PDPEKRLGAKSIEEIKNHPFFKGI  263 (265)
T ss_pred             CCHhhcCCCccHHHHhcCccccCC
Confidence            999999999   999999999854

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=2.8e-40  Score=309.77  Aligned_cols=246  Identities=26%  Similarity=0.357  Sum_probs=195.2

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ..++|+++++||+|+||.||+|..+ +++.||+|.+.........+..|+.+++.+     .|++++++++.+. .+..+
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~-~~~~~   76 (260)
T cd05067           4 PRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMSPEAFLAEANLMKQL-----QHPRLVRLYAVVT-QEPIY   76 (260)
T ss_pred             chHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCcHHHHHHHHHHHHhc-----CCcCeeeEEEEEc-cCCcE
Confidence            3467999999999999999999865 457799999976555556788899999888     5688999998764 56789


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +||||+ +++|.+++.......+++..+..++.|++.||+|||+.||+||||||+||++++++.                
T Consensus        77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~----------------  140 (260)
T cd05067          77 IITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLC----------------  140 (260)
T ss_pred             EEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCC----------------
Confidence            999999 899999998765567999999999999999999999999999999999999965544                


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCh
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN  328 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~  328 (433)
                                 ++|+|||.+.......    ....++..|+|||++.+..++.++|+||||+++|||++ |..||.+.+.
T Consensus       141 -----------~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~  209 (260)
T cd05067         141 -----------CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN  209 (260)
T ss_pred             -----------EEEccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh
Confidence                       5555555554322111    11245678999999998889999999999999999999 9999987665


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      .+....+......                                                ..+...+.++.++|.+||+
T Consensus       210 ~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~li~~~l~  241 (260)
T cd05067         210 PEVIQNLERGYRM------------------------------------------------PRPDNCPEELYELMRLCWK  241 (260)
T ss_pred             HHHHHHHHcCCCC------------------------------------------------CCCCCCCHHHHHHHHHHcc
Confidence            5443332111000                                                0112456689999999999


Q ss_pred             cCCCCCCCHHHHhc
Q 013973          409 YDPTDRLTAREALR  422 (433)
Q Consensus       409 ~dP~~R~ta~ell~  422 (433)
                      .||++|||+++++.
T Consensus       242 ~~p~~Rp~~~~l~~  255 (260)
T cd05067         242 EKPEERPTFEYLRS  255 (260)
T ss_pred             CChhhCCCHHHHHH
Confidence            99999999999875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=2.1e-40  Score=319.91  Aligned_cols=245  Identities=21%  Similarity=0.290  Sum_probs=190.1

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeE----EEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEM----VAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~----vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      .+|++.+.||+|+||.||+|.+..+++.    ||+|+++..  ......+..|+.+++.+     .|+||+++++++...
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~~~g~~~~~   81 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-----DNPHVCRLLGICLTS   81 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEcCC
Confidence            5699999999999999999998766654    899998632  23455677788888887     678999999988764


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                       ..++|+||+ +|+|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||+++++.            
T Consensus        82 -~~~~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~------------  147 (316)
T cd05108          82 -TVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQH------------  147 (316)
T ss_pred             -CceeeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCc------------
Confidence             577899999 999999998754 36889999999999999999999999999999999999965544            


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCCC-----ceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN-----YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALF  323 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf  323 (433)
                                     +||+|||++........     ...++..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus       148 ---------------~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~  212 (316)
T cd05108         148 ---------------VKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY  212 (316)
T ss_pred             ---------------EEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCC
Confidence                           55555555543322111     1134678999999999999999999999999999998 99999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      .+....+....+.                       .+ ...+                        .+..++.++.+++
T Consensus       213 ~~~~~~~~~~~~~-----------------------~~-~~~~------------------------~~~~~~~~~~~li  244 (316)
T cd05108         213 DGIPASEISSILE-----------------------KG-ERLP------------------------QPPICTIDVYMIM  244 (316)
T ss_pred             CCCCHHHHHHHHh-----------------------CC-CCCC------------------------CCCCCCHHHHHHH
Confidence            8755443222111                       00 0000                        1124456789999


Q ss_pred             HhccccCCCCCCCHHHHhcC
Q 013973          404 QGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~h  423 (433)
                      .+||+.||.+||++.+++.+
T Consensus       245 ~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         245 VKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             HHHccCChhhCcCHHHHHHH
Confidence            99999999999999999876

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=2.7e-40  Score=314.38  Aligned_cols=256  Identities=28%  Similarity=0.445  Sum_probs=205.9

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ..+.|++.+.||+|+||.||+|.+..+++.||+|++.......+.+..|+++++.+     .|+|++++++.+......|
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   91 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDC-----KHPNIVDYYDSYLVGDELW   91 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHC-----CCCCeeEEEEEEEECCEEE
Confidence            45679999999999999999999998899999999975444456677899888888     6688999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +|+||+ +++|.+++.... ..+++..+..++.|++.||.|||+.||+|+||||+||+++.++.                
T Consensus        92 lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~----------------  154 (286)
T cd06614          92 VVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGS----------------  154 (286)
T ss_pred             EEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCC----------------
Confidence            999999 799999998754 36999999999999999999999999999999999999965554                


Q ss_pred             cccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                                 ++|+|||.+......   .....|+..|+|||++.+..++.++|+|||||++|+|++|..||...+...
T Consensus       155 -----------~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~  223 (286)
T cd06614         155 -----------VKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR  223 (286)
T ss_pred             -----------EEECccchhhhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                       555555544322211   122357889999999998889999999999999999999999998765544


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+...  ..+                    ..+                        ....++.++.+||.+||+.+
T Consensus       224 ~~~~~~~~--~~~--------------------~~~------------------------~~~~~~~~l~~li~~~l~~~  257 (286)
T cd06614         224 ALFLITTK--GIP--------------------PLK------------------------NPEKWSPEFKDFLNKCLVKD  257 (286)
T ss_pred             HHHHHHhc--CCC--------------------CCc------------------------chhhCCHHHHHHHHHHhccC
Confidence            33222110  000                    000                        01125668999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCC
Q 013973          411 PTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       411 P~~R~ta~ell~hp~f~~~  429 (433)
                      |.+||++.++++|+||++.
T Consensus       258 p~~Rpt~~~il~~~~~~~~  276 (286)
T cd06614         258 PEKRPSAEELLQHPFLKKA  276 (286)
T ss_pred             hhhCcCHHHHhhChHhhcc
Confidence            9999999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=2.2e-40  Score=310.43  Aligned_cols=245  Identities=26%  Similarity=0.361  Sum_probs=192.9

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      .++|++.++||+|+||.||+|.+. ++..+|+|.++........+..|+.+++++     .|++++++++.+. ....++
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l-----~~~~i~~~~~~~~-~~~~~l   77 (260)
T cd05070           5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKL-----RHDKLVQLYAVVS-EEPIYI   77 (260)
T ss_pred             hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhc-----CCCceEEEEeEEC-CCCcEE
Confidence            467999999999999999999876 455699999875444456678899999988     6688999998875 456899


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      ||||+ +++|.+++.......+++..+..++.|++.||.|||+.||+||||||+||++++++.                 
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~-----------------  140 (260)
T cd05070          78 VTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLV-----------------  140 (260)
T ss_pred             EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCce-----------------
Confidence            99999 889999998765557899999999999999999999999999999999999965544                 


Q ss_pred             ccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  329 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~  329 (433)
                                ++|+|||.+.......    ....++..|+|||++.+..++.++|+||||+++|+|++ |..||.+.+..
T Consensus       141 ----------~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~  210 (260)
T cd05070         141 ----------CKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR  210 (260)
T ss_pred             ----------EEeCCceeeeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH
Confidence                      5555555554322211    11234567999999998889999999999999999999 89999876655


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +....+....                      ..                          +.+...+..+.+|+.+||+.
T Consensus       211 ~~~~~~~~~~----------------------~~--------------------------~~~~~~~~~~~~li~~~l~~  242 (260)
T cd05070         211 EVLEQVERGY----------------------RM--------------------------PCPQDCPISLHELMLQCWKK  242 (260)
T ss_pred             HHHHHHHcCC----------------------CC--------------------------CCCCcCCHHHHHHHHHHccc
Confidence            4443322100                      00                          01224566899999999999


Q ss_pred             CCCCCCCHHHHhc
Q 013973          410 DPTDRLTAREALR  422 (433)
Q Consensus       410 dP~~R~ta~ell~  422 (433)
                      ||++|||++++++
T Consensus       243 ~p~~Rpt~~~l~~  255 (260)
T cd05070         243 DPEERPTFEYLQS  255 (260)
T ss_pred             CcccCcCHHHHHH
Confidence            9999999999864

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=2e-40  Score=310.12  Aligned_cols=245  Identities=23%  Similarity=0.331  Sum_probs=193.9

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  176 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV  176 (433)
                      .+|++.+.||+|+||.||+|.++ ++..+|+|++.........+..|+.+++.+     .|++++++++++...+..|+|
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~lv   77 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKL-----SHPNLVQLYGVCTKQRPIFIV   77 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhC-----CCCCEEEEEEEEcCCCceEEE
Confidence            35889999999999999999886 456799999875444445677899998887     678899999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          177 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       177 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      |||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||++++++.                  
T Consensus        78 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~------------------  138 (256)
T cd05059          78 TEYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNV------------------  138 (256)
T ss_pred             EecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCc------------------
Confidence            9999 899999997654 36899999999999999999999999999999999999965554                  


Q ss_pred             cccCCCCCCEEEEecCCccccCCCCC-c---eeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChHH
Q 013973          256 FKRMPKSSAIKVIDFGSTTYERPDQN-Y---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  330 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~~~~~-~---~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~  330 (433)
                               +||+|||.++....... .   ..++..|+|||.+.+..++.++|+||||+++|+|++ |..||...+..+
T Consensus       139 ---------~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~  209 (256)
T cd05059         139 ---------VKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE  209 (256)
T ss_pred             ---------EEECCcccceecccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH
Confidence                     55555555543221111 1   123457999999999899999999999999999999 899998766554


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+.....                      .                          ..+...+.++.+++.+||+.+
T Consensus       210 ~~~~~~~~~~----------------------~--------------------------~~~~~~~~~~~~li~~cl~~~  241 (256)
T cd05059         210 VVESVSAGYR----------------------L--------------------------YRPKLAPTEVYTIMYSCWHEK  241 (256)
T ss_pred             HHHHHHcCCc----------------------C--------------------------CCCCCCCHHHHHHHHHHhcCC
Confidence            4332211100                      0                          012245678999999999999


Q ss_pred             CCCCCCHHHHhcC
Q 013973          411 PTDRLTAREALRH  423 (433)
Q Consensus       411 P~~R~ta~ell~h  423 (433)
                      |++|||+.|+++.
T Consensus       242 p~~Rpt~~~~l~~  254 (256)
T cd05059         242 PEDRPAFKKLLSQ  254 (256)
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999863

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=9.8e-41  Score=312.79  Aligned_cols=246  Identities=23%  Similarity=0.343  Sum_probs=197.6

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh-hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ..+|++.++||.|+||.||+|.+.. ++.+|+|++..... ....+..|+.+++.+     .|++++++++++......+
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   78 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRL-----RHKHLISLFAVCSVGEPVY   78 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcC-----CCcchhheeeeEecCCCeE
Confidence            3569999999999999999999987 78899999875433 455677888888877     6689999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +||||+ +++|.+++.......+++..+..++.||+.||.|||++||+|+||||+|||+++++.+               
T Consensus        79 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~---------------  143 (261)
T cd05148          79 IITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVC---------------  143 (261)
T ss_pred             EEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceE---------------
Confidence            999999 8899999987655679999999999999999999999999999999999999665554               


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  329 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~  329 (433)
                                  ||+|||.+.......   ....++..|+|||++.+..++.++|+||||+++|+|++ |..||...+..
T Consensus       144 ------------kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~  211 (261)
T cd05148         144 ------------KVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH  211 (261)
T ss_pred             ------------EEccccchhhcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH
Confidence                        555555443322111   11235678999999998889999999999999999998 89999876655


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +.+..+.....                                                ...+..++..+.+++.+||+.
T Consensus       212 ~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~~~i~~~l~~  243 (261)
T cd05148         212 EVYDQITAGYR------------------------------------------------MPCPAKCPQEIYKIMLECWAA  243 (261)
T ss_pred             HHHHHHHhCCc------------------------------------------------CCCCCCCCHHHHHHHHHHcCC
Confidence            54443221000                                                011235567899999999999


Q ss_pred             CCCCCCCHHHHhc
Q 013973          410 DPTDRLTAREALR  422 (433)
Q Consensus       410 dP~~R~ta~ell~  422 (433)
                      ||++|||+.++++
T Consensus       244 ~p~~Rpt~~~l~~  256 (261)
T cd05148         244 EPEDRPSFKALRE  256 (261)
T ss_pred             CchhCcCHHHHHH
Confidence            9999999999875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=4.2e-40  Score=309.57  Aligned_cols=248  Identities=25%  Similarity=0.367  Sum_probs=193.7

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeec----chhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++.+.||+|+||.||+|++..+++.||||.++.    .......+..|+++++.+     .|++++++++.+.+.+.
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~   76 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQL-----NHPNVIKYLDSFIEDNE   76 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhC-----CCcceeeeeeeEEECCe
Confidence            569999999999999999999999999999998753    123344567799988888     67899999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      .++||||+ +++|.+++...  ....+++..+..++.||+.||.|||++||+|+||||+|||++.++             
T Consensus        77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~-------------  143 (267)
T cd08228          77 LNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATG-------------  143 (267)
T ss_pred             EEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCC-------------
Confidence            99999999 88999888632  224589999999999999999999999999999999999996544             


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                                    .++|+|||.+.......   ....|+..|+|||.+.+..++.++|+||||+++|||++|..||...
T Consensus       144 --------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~  209 (267)
T cd08228         144 --------------VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD  209 (267)
T ss_pred             --------------CEEECccccceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccc
Confidence                          45556666554332211   1236888999999999888999999999999999999999999654


Q ss_pred             ChH--HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHH
Q 013973          327 ENL--EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  404 (433)
Q Consensus       327 ~~~--~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  404 (433)
                      ...  +....+ ...+. +                       ..                      .....+.++.++|.
T Consensus       210 ~~~~~~~~~~~-~~~~~-~-----------------------~~----------------------~~~~~~~~~~~li~  242 (267)
T cd08228         210 KMNLFSLCQKI-EQCDY-P-----------------------PL----------------------PTEHYSEKLRELVS  242 (267)
T ss_pred             cccHHHHHHHH-hcCCC-C-----------------------CC----------------------ChhhcCHHHHHHHH
Confidence            321  111111 00000 0                       00                      01134567899999


Q ss_pred             hccccCCCCCCCHHHHhcC
Q 013973          405 GLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       405 ~~L~~dP~~R~ta~ell~h  423 (433)
                      +||+.+|++||++.++++.
T Consensus       243 ~cl~~~p~~Rp~~~~vl~~  261 (267)
T cd08228         243 MCIYPDPDQRPDIGYVHQI  261 (267)
T ss_pred             HHCCCCcccCcCHHHHHHH
Confidence            9999999999999999873

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=3.7e-40  Score=308.17  Aligned_cols=243  Identities=23%  Similarity=0.320  Sum_probs=192.4

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEeccee-ecCCeEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF-DYRNHICI  175 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~-~~~~~~~l  175 (433)
                      .+|++.+.||+|+||.||++...  +..||+|.++.. ...+.+..|+.+++.+     .|++++++++.+ ...+..++
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~~l   77 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-ATAQAFLAEASVMTQL-----RHSNLVQLLGVIVEEKGGLYI   77 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCC-chHHHHHHHHHHHHhC-----CCCCeeeEEEEEEcCCCceEE
Confidence            46999999999999999999764  677999998643 3345677899999888     568899999864 55678999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      ||||+ +++|.+++.......+++..+..++.||+.||+|||++||+||||||+||+++++                   
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~-------------------  138 (256)
T cd05082          78 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSED-------------------  138 (256)
T ss_pred             EEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCC-------------------
Confidence            99999 8899999987665568999999999999999999999999999999999999544                   


Q ss_pred             ccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLA  333 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~~~~  333 (433)
                              +.+||+|||++...........++..|+|||++.+..++.++|||||||++|+|++ |..||...+..+...
T Consensus       139 --------~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~  210 (256)
T cd05082         139 --------NVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP  210 (256)
T ss_pred             --------CcEEecCCccceeccccCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence                    45666666665543333333345678999999998889999999999999999998 999997655433332


Q ss_pred             HHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCC
Q 013973          334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  413 (433)
Q Consensus       334 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  413 (433)
                      .+....                          +                      ...++..+..+.+++.+||+.||++
T Consensus       211 ~~~~~~--------------------------~----------------------~~~~~~~~~~~~~li~~~l~~~p~~  242 (256)
T cd05082         211 RVEKGY--------------------------K----------------------MDAPDGCPPVVYDVMKQCWHLDAAT  242 (256)
T ss_pred             HHhcCC--------------------------C----------------------CCCCCCCCHHHHHHHHHHhcCChhh
Confidence            211100                          0                      0112345678999999999999999


Q ss_pred             CCCHHHHhc
Q 013973          414 RLTAREALR  422 (433)
Q Consensus       414 R~ta~ell~  422 (433)
                      |||+.++++
T Consensus       243 Rpt~~~l~~  251 (256)
T cd05082         243 RPSFLQLRE  251 (256)
T ss_pred             CcCHHHHHH
Confidence            999999975

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=5.8e-40  Score=306.06  Aligned_cols=249  Identities=28%  Similarity=0.511  Sum_probs=202.5

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      +|++.+.||.|+||.||++.+..+++.||+|++....   ........|+++++.+     .|++++++.+.+......+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~~~~~~~~~~~~~~~~   75 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKL-----NHPNIIKYYESFEEKGKLC   75 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhc-----CCCChhheEEEEecCCEEE
Confidence            4899999999999999999999999999999986432   3455677888888888     5688999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNN--YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +|||++ +++|.+++....  ...+++..+..++.|++.||.|||+.|++|+||+|+||+++.++               
T Consensus        76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~---------------  140 (258)
T cd08215          76 IVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNG---------------  140 (258)
T ss_pred             EEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCC---------------
Confidence            999999 789999998642  35799999999999999999999999999999999999995544               


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                                  .++|+|||.+.......   ....|++.|+|||.+.+..++.++|+||+|+++|+|++|..||...+.
T Consensus       141 ------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~  208 (258)
T cd08215         141 ------------LVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL  208 (258)
T ss_pred             ------------cEEECCccceeecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH
Confidence                        45666666554332221   234688999999999998899999999999999999999999977654


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      .+....+...                       ..                         ...+..++.++.+++.+||+
T Consensus       209 ~~~~~~~~~~-----------------------~~-------------------------~~~~~~~~~~~~~~i~~~l~  240 (258)
T cd08215         209 LELALKILKG-----------------------QY-------------------------PPIPSQYSSELRNLVSSLLQ  240 (258)
T ss_pred             HHHHHHHhcC-----------------------CC-------------------------CCCCCCCCHHHHHHHHHHcC
Confidence            4333221110                       00                         01122456789999999999


Q ss_pred             cCCCCCCCHHHHhcCCCC
Q 013973          409 YDPTDRLTAREALRHPFF  426 (433)
Q Consensus       409 ~dP~~R~ta~ell~hp~f  426 (433)
                      .||++|||+.|+|+||||
T Consensus       241 ~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         241 KDPEERPSIAQILQSPFI  258 (258)
T ss_pred             CChhhCcCHHHHhcCCCC
Confidence            999999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1e-39  Score=306.71  Aligned_cols=254  Identities=26%  Similarity=0.425  Sum_probs=196.2

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc------hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec-
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI------KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY-  169 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~-  169 (433)
                      .+|++.+.||+|+||.||+|.+..+++.||+|++...      ......+..|+.+++++     .|++++++++.+.+ 
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l-----~h~~i~~~~~~~~~~   76 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL-----RHDRIVQYYGCLRDP   76 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHc-----CCCCcceEEEEEEcC
Confidence            4699999999999999999999999999999987421      22334567789999888     56889999998865 


Q ss_pred             -CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC
Q 013973          170 -RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       170 -~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                       .+.+++||||+ +++|.+++...+  .+++..+..++.||+.||.|||+.||+|+||||+||+++.++.++|+|||++.
T Consensus        77 ~~~~~~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~  154 (264)
T cd06653          77 EEKKLSIFVEYMPGGSIKDQLKAYG--ALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASK  154 (264)
T ss_pred             CCCEEEEEEEeCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccc
Confidence             35789999999 889999998654  58999999999999999999999999999999999999665555555555443


Q ss_pred             CCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                      ......                     ..........|+..|+|||++.+..++.++|+|||||++|+|++|..||....
T Consensus       155 ~~~~~~---------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  213 (264)
T cd06653         155 RIQTIC---------------------MSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYE  213 (264)
T ss_pred             cccccc---------------------ccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccC
Confidence            221000                     00001122468899999999999889999999999999999999999998654


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      .......+.  ..+.+                                             ...++..+..+.++|.+||
T Consensus       214 ~~~~~~~~~--~~~~~---------------------------------------------~~~p~~~~~~~~~~i~~~l  246 (264)
T cd06653         214 AMAAIFKIA--TQPTK---------------------------------------------PMLPDGVSDACRDFLKQIF  246 (264)
T ss_pred             HHHHHHHHH--cCCCC---------------------------------------------CCCCcccCHHHHHHHHHHh
Confidence            443322111  00000                                             0123456778999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCC
Q 013973          408 RYDPTDRLTAREALRHPFF  426 (433)
Q Consensus       408 ~~dP~~R~ta~ell~hp~f  426 (433)
                      + +|.+||++.+++.|||+
T Consensus       247 ~-~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         247 V-EEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             c-CcccCccHHHHhcCCCC
Confidence            9 57999999999999995

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=2.6e-40  Score=317.28  Aligned_cols=248  Identities=22%  Similarity=0.294  Sum_probs=191.4

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeE--EEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEM--VAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~--vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++.+.||+|+||.||+|.++.++..  +|+|.++..  ......+..|++++.++.    +|++++++++++...+.
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~----~h~~iv~~~~~~~~~~~   82 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG----HHPNIINLLGACEHRGY   82 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhc----CCCCcceEEEEECCCCC
Confidence            5699999999999999999998877754  577776532  233455677888888873    45789999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCc
Q 013973          173 ICIVFEKL-GSSLYDFLRKNN--------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEY  237 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~  237 (433)
                      +|+||||+ +++|.+++....              ...+++..++.++.||+.||+|||++||+||||||+|||+++++ 
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~-  161 (303)
T cd05088          83 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY-  161 (303)
T ss_pred             ceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCC-
Confidence            99999999 899999997543              13588999999999999999999999999999999999995544 


Q ss_pred             cccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC--CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHH
Q 013973          238 IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE  315 (433)
Q Consensus       238 ~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~e  315 (433)
                                                .+||+|||++......  .....++..|+|||++.+..++.++|||||||++||
T Consensus       162 --------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  215 (303)
T cd05088         162 --------------------------VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE  215 (303)
T ss_pred             --------------------------cEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHH
Confidence                                      4556666655321111  111134667999999988889999999999999999


Q ss_pred             HHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCC
Q 013973          316 LCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH  394 (433)
Q Consensus       316 llt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (433)
                      |+| |..||...+..+....+..                       + ..+                        ..+..
T Consensus       216 llt~g~~p~~~~~~~~~~~~~~~-----------------------~-~~~------------------------~~~~~  247 (303)
T cd05088         216 IVSLGGTPYCGMTCAELYEKLPQ-----------------------G-YRL------------------------EKPLN  247 (303)
T ss_pred             HHhcCCCCcccCChHHHHHHHhc-----------------------C-CcC------------------------CCCCC
Confidence            998 9999976655443322110                       0 000                        01123


Q ss_pred             chhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          395 SAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       395 ~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                      .+.++.+||.+||+.||++||++.+++++
T Consensus       248 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         248 CDDEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            46688999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=3.4e-40  Score=313.17  Aligned_cols=247  Identities=21%  Similarity=0.324  Sum_probs=192.8

Q ss_pred             CcEEEEeeeeccccEEEEEEEEC----CCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDR----ERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~----~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      ++|++.+.||+|+||.||+|.+.    .+++.||+|.++...  .....+..|+.+++.+     .|+|++++++++...
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~   79 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAEL-----HHPNIVCLLGVVTQE   79 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhC-----CCCCeeeEEEEEecC
Confidence            46899999999999999999853    456789999986422  2234567799998888     678999999999999


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcC---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeec
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNN---------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVS  234 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~---------------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~  234 (433)
                      ...|+||||+ +++|.+++....               ...+++..+..++.|++.||.|||++||+||||||+|||+++
T Consensus        80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~  159 (283)
T cd05090          80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGE  159 (283)
T ss_pred             CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcC
Confidence            9999999999 889999986332               124788999999999999999999999999999999999965


Q ss_pred             cCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhCCCCCCcchhHHH
Q 013973          235 SEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYPCDIWSV  309 (433)
Q Consensus       235 ~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSl  309 (433)
                      ++                           .+||+|||++......     .....++..|+|||++.+..++.++|+|||
T Consensus       160 ~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~sl  212 (283)
T cd05090         160 QL---------------------------HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSF  212 (283)
T ss_pred             CC---------------------------cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHH
Confidence            44                           4555555555432211     122345678999999998889999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHH
Q 013973          310 GCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI  388 (433)
Q Consensus       310 Gv~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (433)
                      ||++|||++ |..||.+.+..+....+..                      ...+                         
T Consensus       213 G~il~el~~~g~~p~~~~~~~~~~~~~~~----------------------~~~~-------------------------  245 (283)
T cd05090         213 GVVLWEIFSFGLQPYYGFSNQEVIEMVRK----------------------RQLL-------------------------  245 (283)
T ss_pred             HHHHHHHHcCCCCCCCCCCHHHHHHHHHc----------------------CCcC-------------------------
Confidence            999999998 9999987655443322211                      0000                         


Q ss_pred             hhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          389 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       389 ~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                       ..+..++..+.+++.+||+.||++||++.+++++
T Consensus       246 -~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         246 -PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             -CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence             0123456789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.8e-40  Score=304.15  Aligned_cols=247  Identities=29%  Similarity=0.456  Sum_probs=201.8

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      +|++.+.||+|++|.||+|.+..+++.||+|.+....   .....+..|++++.++     .|++++++.+++...+..+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   75 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNL-----KHPNIVKYIGSIETSDSLY   75 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhC-----CCCCccEEEEEEEeCCEEE
Confidence            4889999999999999999999999999999987543   3455677888888887     5678999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +||||+ +++|.+++....  .+++..+..++.|++.||.|||+.||+|+||||+||+++.                   
T Consensus        76 ~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~-------------------  134 (254)
T cd06627          76 IILEYAENGSLRQIIKKFG--PFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTK-------------------  134 (254)
T ss_pred             EEEecCCCCcHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECC-------------------
Confidence            999999 889999998763  7999999999999999999999999999999999999954                   


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                              ++.++|+|||.+.......   ....|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+...
T Consensus       135 --------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~  206 (254)
T cd06627         135 --------DGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMA  206 (254)
T ss_pred             --------CCCEEEeccccceecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence                    4456666666665443322   23468899999999988888999999999999999999999997655433


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+..                      ...                          ...+...+..+.+++.+||+.|
T Consensus       207 ~~~~~~~----------------------~~~--------------------------~~~~~~~~~~~~~~i~~~l~~~  238 (254)
T cd06627         207 ALFRIVQ----------------------DDH--------------------------PPLPEGISPELKDFLMQCFQKD  238 (254)
T ss_pred             HHHHHhc----------------------cCC--------------------------CCCCCCCCHHHHHHHHHHHhCC
Confidence            2221110                      000                          0112345678999999999999


Q ss_pred             CCCCCCHHHHhcCCCC
Q 013973          411 PTDRLTAREALRHPFF  426 (433)
Q Consensus       411 P~~R~ta~ell~hp~f  426 (433)
                      |++|||+.+++.||||
T Consensus       239 p~~R~~~~~~l~~~~~  254 (254)
T cd06627         239 PNLRPTAKQLLKHPWI  254 (254)
T ss_pred             hhhCcCHHHHhcCCCC
Confidence            9999999999999998

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=3.5e-40  Score=327.19  Aligned_cols=249  Identities=21%  Similarity=0.285  Sum_probs=191.5

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECC-----CCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRE-----RKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~-----~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      .++|++.+.||+|+||.||+|.+..     ++..||||+++..  ....+.+..|+.+++++.    .|+||+++++++.
T Consensus        36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~----~HpnIv~l~~~~~  111 (400)
T cd05105          36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLG----PHLNIVNLLGACT  111 (400)
T ss_pred             ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcC----CCCCeeeEEEEEc
Confidence            3579999999999999999998743     3457999999643  233456778999998882    3789999999999


Q ss_pred             cCCeEEEEEecC-CCCHHHHHHhcC-------------------------------------------------------
Q 013973          169 YRNHICIVFEKL-GSSLYDFLRKNN-------------------------------------------------------  192 (433)
Q Consensus       169 ~~~~~~lV~e~~-~~~L~~~l~~~~-------------------------------------------------------  192 (433)
                      ..+.+||||||+ +|+|.++|.++.                                                       
T Consensus       112 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (400)
T cd05105         112 KSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPM  191 (400)
T ss_pred             cCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchh
Confidence            999999999999 999999987532                                                       


Q ss_pred             ---------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEee
Q 013973          193 ---------------------------------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV  233 (433)
Q Consensus       193 ---------------------------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~  233 (433)
                                                             ...+++..+..++.||+.||.|||+.+|+||||||+|||++
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~  271 (400)
T cd05105         192 LEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLA  271 (400)
T ss_pred             hhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEe
Confidence                                                   12478888899999999999999999999999999999995


Q ss_pred             ccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHH
Q 013973          234 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWS  308 (433)
Q Consensus       234 ~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwS  308 (433)
                      .++                           .+||+|||++.......     ....++..|+|||++.+..++.++||||
T Consensus       272 ~~~---------------------------~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwS  324 (400)
T cd05105         272 QGK---------------------------IVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWS  324 (400)
T ss_pred             CCC---------------------------EEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHH
Confidence            544                           46666666654322111     1234678899999999989999999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHH
Q 013973          309 VGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL  387 (433)
Q Consensus       309 lGv~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (433)
                      |||++|||++ |..||.............                      ..+. .                       
T Consensus       325 lGvil~ellt~g~~P~~~~~~~~~~~~~~----------------------~~~~-~-----------------------  358 (400)
T cd05105         325 YGILLWEIFSLGGTPYPGMIVDSTFYNKI----------------------KSGY-R-----------------------  358 (400)
T ss_pred             HHHHHHHHHHCCCCCCcccchhHHHHHHH----------------------hcCC-C-----------------------
Confidence            9999999997 999997643322211110                      0000 0                       


Q ss_pred             HhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhc
Q 013973          388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       388 ~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                       ...+...+.++.+++.+||+.||++|||+.+|.+
T Consensus       359 -~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  392 (400)
T cd05105         359 -MAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD  392 (400)
T ss_pred             -CCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence             0012345678999999999999999999988765

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=2.9e-41  Score=340.61  Aligned_cols=245  Identities=24%  Similarity=0.400  Sum_probs=209.1

Q ss_pred             cCcEEEEeeeeccccEEEEEEEEC-----CCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~-----~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      +.+.+..++||+|+||+||+|+..     +....||||.++..  .+.+.++.+|++++..+     .|+|||++++.+.
T Consensus       485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l-----~H~nIVrLlGVC~  559 (774)
T KOG1026|consen  485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAEL-----QHPNIVRLLGVCR  559 (774)
T ss_pred             hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhc-----cCCCeEEEEEEEc
Confidence            456788999999999999999764     23467999999743  34678899999999999     7899999999999


Q ss_pred             cCCeEEEEEecC-CCCHHHHHHhcC--------C----CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeecc
Q 013973          169 YRNHICIVFEKL-GSSLYDFLRKNN--------Y----RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSS  235 (433)
Q Consensus       169 ~~~~~~lV~e~~-~~~L~~~l~~~~--------~----~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~  235 (433)
                      .++.+|+|+||| .|||.+||....        .    ..|+..+.+.|+.||+.|++||-++.+|||||-..|+||   
T Consensus       560 ~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLV---  636 (774)
T KOG1026|consen  560 EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLV---  636 (774)
T ss_pred             cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhcee---
Confidence            999999999999 999999997432        1    238889999999999999999999999999999999999   


Q ss_pred             CccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceee-----cCcccchhhhhCCCCCCcchhHHHH
Q 013973          236 EYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVS-----TRHYRAPEVILGLGWTYPCDIWSVG  310 (433)
Q Consensus       236 ~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~g-----t~~y~aPE~~~~~~~~~~~DvwSlG  310 (433)
                                              .++..|||+|||+++.....+.+.++     ...||+||.|...+|+.+|||||||
T Consensus       637 ------------------------ge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~G  692 (774)
T KOG1026|consen  637 ------------------------GENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFG  692 (774)
T ss_pred             ------------------------ccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhh
Confidence                                    56778888888888766555444333     6789999999999999999999999


Q ss_pred             HHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHh
Q 013973          311 CILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM  389 (433)
Q Consensus       311 v~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (433)
                      |+|||+.+ |..||.+.++.+.+..+                       ..|.+                         .
T Consensus       693 VvLWEIFsyG~QPy~glSn~EVIe~i-----------------------~~g~l-------------------------L  724 (774)
T KOG1026|consen  693 VVLWEIFSYGKQPYYGLSNQEVIECI-----------------------RAGQL-------------------------L  724 (774)
T ss_pred             hhhhhhhccccCcccccchHHHHHHH-----------------------HcCCc-------------------------c
Confidence            99999999 99999999988877653                       23322                         2


Q ss_pred             hhcCCchhHHHHHHHhccccCCCCCCCHHHH
Q 013973          390 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREA  420 (433)
Q Consensus       390 ~~~~~~~~~~~~li~~~L~~dP~~R~ta~el  420 (433)
                      ..++.++.++.+|+..||+.+|++||++.||
T Consensus       725 ~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI  755 (774)
T KOG1026|consen  725 SCPENCPTEVYSLMLECWNENPKRRPSFKEI  755 (774)
T ss_pred             cCCCCCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence            3456889999999999999999999999887

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=1.8e-40  Score=323.08  Aligned_cols=249  Identities=21%  Similarity=0.311  Sum_probs=189.2

Q ss_pred             CcEEEEeeeeccccEEEEEEEECC-----CCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee-
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRE-----RKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD-  168 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~-----~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~-  168 (433)
                      ++|++.+.||+|+||.||+|....     +++.||+|+++..  ......+..|+.+++++.    .|+||+++++.+. 
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~----~h~niv~~~~~~~~   82 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIG----HHLNVVNLLGACTK   82 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhc----cCcchhheeeeEec
Confidence            579999999999999999997543     4578999998642  223345667888888773    4578999998775 


Q ss_pred             cCCeEEEEEecC-CCCHHHHHHhcCC------------------------------------------------------
Q 013973          169 YRNHICIVFEKL-GSSLYDFLRKNNY------------------------------------------------------  193 (433)
Q Consensus       169 ~~~~~~lV~e~~-~~~L~~~l~~~~~------------------------------------------------------  193 (433)
                      ....+++||||+ +++|.+++.....                                                      
T Consensus        83 ~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (337)
T cd05054          83 PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEG  162 (337)
T ss_pred             CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhh
Confidence            456789999999 9999999864321                                                      


Q ss_pred             -----CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEE
Q 013973          194 -----RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI  268 (433)
Q Consensus       194 -----~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~  268 (433)
                           ..+++..+..++.||+.||+|||++||+||||||+|||++.++                           .++|+
T Consensus       163 ~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~---------------------------~vkL~  215 (337)
T cd05054         163 DELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENN---------------------------VVKIC  215 (337)
T ss_pred             hHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCC---------------------------cEEEe
Confidence                 2688999999999999999999999999999999999996544                           46666


Q ss_pred             ecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCC
Q 013973          269 DFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPL  342 (433)
Q Consensus       269 Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~  342 (433)
                      |||++.......     ....++..|+|||++.+..++.++|||||||++|||++ |..||.+....+.+....      
T Consensus       216 DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~------  289 (337)
T cd05054         216 DFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRL------  289 (337)
T ss_pred             ccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHH------
Confidence            666655332111     12345678999999999999999999999999999998 999997643322211100      


Q ss_pred             CHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhc
Q 013973          343 PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       343 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                                      ..+...                         ..+...+.++.+++.+||+.+|++||++.|+++
T Consensus       290 ----------------~~~~~~-------------------------~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~  328 (337)
T cd05054         290 ----------------KEGTRM-------------------------RAPEYATPEIYSIMLDCWHNNPEDRPTFSELVE  328 (337)
T ss_pred             ----------------hccCCC-------------------------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                            000000                         011244668999999999999999999999987


Q ss_pred             C
Q 013973          423 H  423 (433)
Q Consensus       423 h  423 (433)
                      |
T Consensus       329 ~  329 (337)
T cd05054         329 I  329 (337)
T ss_pred             H
Confidence            5

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=9.8e-40  Score=304.44  Aligned_cols=249  Identities=30%  Similarity=0.466  Sum_probs=202.1

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC--Ce
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR--NH  172 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~--~~  172 (433)
                      +|.+.+.||+|++|.||+|.+..+++.|++|++....   ...+.+..|+.+++++     +|++++++++.+...  ..
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   75 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSL-----QHPNIVRYYGSERDEEKNT   75 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHc-----CCCCEeeEEEEEecCCCCe
Confidence            4888999999999999999999999999999987543   3456677889999888     578999999999888  89


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +++||||+ +++|.+++....  .+++..+..++.|++.||.|||+.|++|+||+|+||+++.                 
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~-----------------  136 (260)
T cd06606          76 LNIFLEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDS-----------------  136 (260)
T ss_pred             EEEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcC-----------------
Confidence            99999999 999999998765  7999999999999999999999999999999999999954                 


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                                ++.++|+|||.+.......     ....++..|+|||.+.+..++.++|+||||+++|+|++|..||...
T Consensus       137 ----------~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~  206 (260)
T cd06606         137 ----------DGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSEL  206 (260)
T ss_pred             ----------CCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence                      4456666666555433321     2346889999999999888999999999999999999999999865


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      ++....  +....                   ...                         .....+...+.++.+||.+|
T Consensus       207 ~~~~~~--~~~~~-------------------~~~-------------------------~~~~~~~~~~~~l~~~i~~~  240 (260)
T cd06606         207 GNPMAA--LYKIG-------------------SSG-------------------------EPPEIPEHLSEEAKDFLRKC  240 (260)
T ss_pred             CchHHH--HHhcc-------------------ccC-------------------------CCcCCCcccCHHHHHHHHHh
Confidence            521111  10000                   000                         00011234567899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFF  426 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f  426 (433)
                      |+.||++||++.|++.||||
T Consensus       241 l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         241 LRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             CcCChhhCCCHHHHhhCCCC
Confidence            99999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=5.2e-40  Score=312.85  Aligned_cols=246  Identities=24%  Similarity=0.376  Sum_probs=192.8

Q ss_pred             CcEEEEeeeeccccEEEEEEEE-----CCCCeEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           97 SRYKIHSKMGEGTFGQVLECWD-----RERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~-----~~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      .+|.+.+.||+|+||.||++.+     ..++..+|+|.+... ......+..|+++++++     .|++++++++.+...
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~   79 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-----QHEHIVKFYGVCVEG   79 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhC-----CCCCcceEEEEEecC
Confidence            4699999999999999999985     335567999998643 23445677899999888     668899999999999


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcC-----------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCcc
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNN-----------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI  238 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~-----------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~  238 (433)
                      +.+++||||+ +++|.+++...+           ...+++..+..++.||+.||+|||++||+||||||+|||+++++.+
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~  159 (288)
T cd05093          80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLV  159 (288)
T ss_pred             CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcE
Confidence            9999999999 899999997543           1248999999999999999999999999999999999999665555


Q ss_pred             ccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHHHHH
Q 013973          239 KVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL  313 (433)
Q Consensus       239 ~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l  313 (433)
                      +++|                           ||.+.......     ....++..|+|||++.+..++.++|+|||||++
T Consensus       160 kl~d---------------------------fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il  212 (288)
T cd05093         160 KIGD---------------------------FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVL  212 (288)
T ss_pred             Eecc---------------------------CCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHH
Confidence            5554                           44443221111     112457789999999998999999999999999


Q ss_pred             HHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhc
Q 013973          314 VELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV  392 (433)
Q Consensus       314 ~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (433)
                      |+|++ |..||......+....+..                       +..                         ...+
T Consensus       213 ~~l~t~g~~p~~~~~~~~~~~~i~~-----------------------~~~-------------------------~~~~  244 (288)
T cd05093         213 WEIFTYGKQPWYQLSNNEVIECITQ-----------------------GRV-------------------------LQRP  244 (288)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHc-----------------------CCc-------------------------CCCC
Confidence            99998 9999987665443332211                       100                         0011


Q ss_pred             CCchhHHHHHHHhccccCCCCCCCHHHHhc
Q 013973          393 DHSAGDLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       393 ~~~~~~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                      ...+.++.+|+.+||+.||.+|||+.|++.
T Consensus       245 ~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         245 RTCPKEVYDLMLGCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             CCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            245678999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=7e-40  Score=307.14  Aligned_cols=244  Identities=26%  Similarity=0.371  Sum_probs=192.3

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  176 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV  176 (433)
                      ++|++.+.||+|+||.||+|.+..++ .+|+|.+.......+.+..|+.+++.+     .|++++++++.+. .+..++|
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~-~~~lK~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~-~~~~~~v   78 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTT-KVAIKTLKPGTMMPEAFLQEAQIMKKL-----RHDKLVPLYAVVS-EEPIYIV   78 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCc-eEEEEEcccCCccHHHHHHHHHHHHhC-----CCCCeeeEEEEEc-CCCcEEE
Confidence            56999999999999999999887664 599998875444456677899999888     6688999988875 4568899


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          177 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       177 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      |||+ +++|.+++.......+++..+..++.|++.||.|||+.||+|+||||+||++++++                   
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~-------------------  139 (260)
T cd05069          79 TEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNL-------------------  139 (260)
T ss_pred             EEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCC-------------------
Confidence            9999 78999999875545689999999999999999999999999999999999995544                   


Q ss_pred             cccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChHH
Q 013973          256 FKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  330 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~  330 (433)
                              .++|+|||.+.......    ....++..|+|||++.+..++.++|+||||+++|+|++ |..||.+....+
T Consensus       140 --------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~  211 (260)
T cd05069         140 --------VCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE  211 (260)
T ss_pred             --------eEEECCCccceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence                    45556666554332211    11245678999999998889999999999999999999 999998766554


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+....                      ..                          ..+...+..+.+|+.+||++|
T Consensus       212 ~~~~~~~~~----------------------~~--------------------------~~~~~~~~~~~~li~~~l~~~  243 (260)
T cd05069         212 VLEQVERGY----------------------RM--------------------------PCPQGCPESLHELMKLCWKKD  243 (260)
T ss_pred             HHHHHHcCC----------------------CC--------------------------CCCcccCHHHHHHHHHHccCC
Confidence            433221100                      00                          011245668999999999999


Q ss_pred             CCCCCCHHHHhc
Q 013973          411 PTDRLTAREALR  422 (433)
Q Consensus       411 P~~R~ta~ell~  422 (433)
                      |++||+++++++
T Consensus       244 p~~Rp~~~~i~~  255 (260)
T cd05069         244 PDERPTFEYIQS  255 (260)
T ss_pred             cccCcCHHHHHH
Confidence            999999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=100.00  E-value=2.4e-41  Score=292.20  Aligned_cols=283  Identities=27%  Similarity=0.536  Sum_probs=220.4

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC--CeE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR--NHI  173 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~--~~~  173 (433)
                      .++|++++++|+|.|+.||.|.+..+++.++||+++..+  .+...+|+.+|+.++    +++||+.+++...+.  ...
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk--kkKIkREikIL~nL~----gg~NIi~L~DiV~Dp~Sktp  110 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK--KKKIKREIKILQNLR----GGPNIIKLLDIVKDPESKTP  110 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH--HHHHHHHHHHHHhcc----CCCCeeehhhhhcCccccCc
Confidence            478999999999999999999999999999999998544  466788999999984    578899999998764  567


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      .|++||+ +.+....-     ..|+.-.++.++.|++.||.|||++||+|||+||.|++|+                   
T Consensus       111 aLiFE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmId-------------------  166 (338)
T KOG0668|consen  111 SLIFEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMID-------------------  166 (338)
T ss_pred             hhHhhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeec-------------------
Confidence            8999999 54544332     2588889999999999999999999999999999999996                   


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCCCc--eeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCC-CCCCh
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQNY--IVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALF-QTHEN  328 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf-~~~~~  328 (433)
                             .+...++|+|+|+|-+..+...+  .+.+..|--||.+..- .|+..-|+|||||++..|+..+.|| .+.++
T Consensus       167 -------h~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN  239 (338)
T KOG0668|consen  167 -------HELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN  239 (338)
T ss_pred             -------hhhceeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCC
Confidence                   45568999999999988887754  4678899999999864 5889999999999999999988765 78899


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCC-chhHHHHHHHhcc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH-SAGDLTHLLQGLL  407 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L  407 (433)
                      .+++..|.+.+|.          +....|+.+-.+..++..   +.+.....-......+..-... .++++.||+.++|
T Consensus       240 ~DQLVkIakVLGt----------~el~~Yl~KY~i~Ldp~~---~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklL  306 (338)
T KOG0668|consen  240 YDQLVKIAKVLGT----------DELYAYLNKYQIDLDPQF---EDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLL  306 (338)
T ss_pred             HHHHHHHHHHhCh----------HHHHHHHHHHccCCChhH---hhHhhccccccHHHhCCccccccCChHHHHHHHHHH
Confidence            9999999999997          222333333222221110   1111111111111111111122 3589999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCC
Q 013973          408 RYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       408 ~~dP~~R~ta~ell~hp~f~~  428 (433)
                      ..|..+|+||.|++.||||..
T Consensus       307 rYDHqeRlTakEam~HpyF~~  327 (338)
T KOG0668|consen  307 RYDHQERLTAKEAMAHPYFAP  327 (338)
T ss_pred             hhccccccchHHHhcCchHHH
Confidence            999999999999999999963

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=1.1e-39  Score=314.99  Aligned_cols=252  Identities=25%  Similarity=0.393  Sum_probs=200.4

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ..|...+.||+|+||.||+|.+..+++.||+|.+....    .....+..|+++++.+     .|++++++++++.....
T Consensus        25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~   99 (317)
T cd06635          25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRI-----KHPNSIEYKGCYLREHT   99 (317)
T ss_pred             hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhC-----CCCCEEEEEEEEeeCCe
Confidence            44888999999999999999999999999999986321    2234566788888877     66889999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          173 ICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       173 ~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      .++||||+.|+|.+++.... ..+++..+..++.||+.||.|||+.||+||||||+||+++.                  
T Consensus       100 ~~lv~e~~~g~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~------------------  160 (317)
T cd06635         100 AWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTE------------------  160 (317)
T ss_pred             EEEEEeCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECC------------------
Confidence            99999999778888876543 46899999999999999999999999999999999999954                  


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhh---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCChH
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHENL  329 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~  329 (433)
                               ++.++|+|||.+..... .....|+..|+|||++.   ...++.++|||||||++|+|++|..||...+..
T Consensus       161 ---------~~~~kl~dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~  230 (317)
T cd06635         161 ---------PGQVKLADFGSASIASP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM  230 (317)
T ss_pred             ---------CCCEEEecCCCccccCC-cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH
Confidence                     44567777776554332 22346889999999984   356889999999999999999999999765544


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      .....+.....+                      ..                         .....+..+.+||.+||+.
T Consensus       231 ~~~~~~~~~~~~----------------------~~-------------------------~~~~~~~~l~~li~~~l~~  263 (317)
T cd06635         231 SALYHIAQNESP----------------------TL-------------------------QSNEWSDYFRNFVDSCLQK  263 (317)
T ss_pred             HHHHHHHhccCC----------------------CC-------------------------CCccccHHHHHHHHHHccC
Confidence            433332211100                      00                         0123456789999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCC
Q 013973          410 DPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       410 dP~~R~ta~ell~hp~f~~~  429 (433)
                      +|.+||++.++++|+|+...
T Consensus       264 ~p~~Rpt~~~il~~~~~~~~  283 (317)
T cd06635         264 IPQDRPTSEELLKHMFVLRE  283 (317)
T ss_pred             CcccCcCHHHHHhChhhhcc
Confidence            99999999999999998654

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=3.8e-40  Score=307.30  Aligned_cols=239  Identities=21%  Similarity=0.343  Sum_probs=187.4

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecC
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  180 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~  180 (433)
                      +.||+|+||.||+|.++.+++.||+|.+...  ......+..|+++++.+     .|++|+++++++.....+++||||+
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~   75 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQY-----SHPNIVRLIGVCTQKQPIYIVMELV   75 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhC-----CCCCcceEEEEEcCCCCeEEEEeec
Confidence            4699999999999999999999999987632  23345677899988887     6789999999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccC
Q 013973          181 -GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM  259 (433)
Q Consensus       181 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~  259 (433)
                       +++|.+++.... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++++|||++.            
T Consensus        76 ~~~~L~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~------------  142 (252)
T cd05084          76 QGGDFLTFLRTEG-PRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSR------------  142 (252)
T ss_pred             cCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCc------------
Confidence             889999997643 368999999999999999999999999999999999999766655555555443            


Q ss_pred             CCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 013973          260 PKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLA  333 (433)
Q Consensus       260 ~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~~~~  333 (433)
                                     ......     ....++..|+|||.+.+..++.++|+|||||++|||++ |..||......+...
T Consensus       143 ---------------~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~  207 (252)
T cd05084         143 ---------------EEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTRE  207 (252)
T ss_pred             ---------------ccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHH
Confidence                           211110     01123457999999998889999999999999999998 899997655433222


Q ss_pred             HHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCC
Q 013973          334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  413 (433)
Q Consensus       334 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  413 (433)
                      .+...                      ...                          ..+...+..+.+|+.+||+.||++
T Consensus       208 ~~~~~----------------------~~~--------------------------~~~~~~~~~~~~li~~~l~~~p~~  239 (252)
T cd05084         208 AIEQG----------------------VRL--------------------------PCPELCPDAVYRLMERCWEYDPGQ  239 (252)
T ss_pred             HHHcC----------------------CCC--------------------------CCcccCCHHHHHHHHHHcCCChhh
Confidence            21110                      000                          012245678999999999999999


Q ss_pred             CCCHHHHhc
Q 013973          414 RLTAREALR  422 (433)
Q Consensus       414 R~ta~ell~  422 (433)
                      |||+.++++
T Consensus       240 Rps~~~~~~  248 (252)
T cd05084         240 RPSFSTVHQ  248 (252)
T ss_pred             CcCHHHHHH
Confidence            999999975

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=8.1e-40  Score=305.79  Aligned_cols=244  Identities=23%  Similarity=0.327  Sum_probs=196.9

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  176 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV  176 (433)
                      ++|++.+.||.|+||.||+|...  ++.||+|.++......+.+..|+.+++.+     .|++++++++++......++|
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~~v   78 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDSTAAQAFLAEASVMTTL-----RHPNLVQLLGVVLQGNPLYIV   78 (256)
T ss_pred             hhccceeeeecCCCceEEEEEec--CcEEEEEEeccchhHHHHHHHHHHHHHhc-----CCcceeeeEEEEcCCCCeEEE
Confidence            56899999999999999999864  67899999976544456778899999888     568899999999989999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          177 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       177 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      |||+ +++|.+++.......+++..+..++.|++.||.|||+.||+|+||||+||+++.+                    
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~--------------------  138 (256)
T cd05039          79 TEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSED--------------------  138 (256)
T ss_pred             EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCC--------------------
Confidence            9999 7899999987655579999999999999999999999999999999999999544                    


Q ss_pred             cccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 013973          256 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAM  334 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~~~~~  334 (433)
                             +.++|+|||.+...........++..|+|||++.+..++.++|+||||+++|+|++ |..||......+....
T Consensus       139 -------~~~~l~d~g~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~  211 (256)
T cd05039         139 -------LVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPH  211 (256)
T ss_pred             -------CCEEEcccccccccccccccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence                   45666666666544332223345667999999998889999999999999999997 9999976554433222


Q ss_pred             HHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCC
Q 013973          335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  414 (433)
Q Consensus       335 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  414 (433)
                      +..                      ....                          ..+..+++++.++|.+||+.||++|
T Consensus       212 ~~~----------------------~~~~--------------------------~~~~~~~~~~~~li~~~l~~~p~~R  243 (256)
T cd05039         212 VEK----------------------GYRM--------------------------EAPEGCPPEVYKVMKDCWELDPAKR  243 (256)
T ss_pred             Hhc----------------------CCCC--------------------------CCccCCCHHHHHHHHHHhccChhhC
Confidence            110                      0000                          0122456789999999999999999


Q ss_pred             CCHHHHhc
Q 013973          415 LTAREALR  422 (433)
Q Consensus       415 ~ta~ell~  422 (433)
                      ||+.|++.
T Consensus       244 p~~~~l~~  251 (256)
T cd05039         244 PTFKQLRE  251 (256)
T ss_pred             cCHHHHHH
Confidence            99999975

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=8.9e-40  Score=306.30  Aligned_cols=246  Identities=26%  Similarity=0.349  Sum_probs=197.4

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      .++|.+.+.||+|+||.||+|.+. +++.||||.+.........+..|+.+++.+     .|++++++++.+......++
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~~   78 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKL-----RHDKLVQLYAVCSEEEPIYI   78 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhC-----CCCCEeeeeeeeecCCceEE
Confidence            467999999999999999999976 456799999976555556788899999888     67899999999999899999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      ||||+ +++|.+++.......+++..+..++.|++.||.|||++||+|+||||+||++++++                  
T Consensus        79 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~------------------  140 (261)
T cd05034          79 VTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENL------------------  140 (261)
T ss_pred             EEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCC------------------
Confidence            99999 88999999876556799999999999999999999999999999999999996544                  


Q ss_pred             ccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  329 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~  329 (433)
                               .++|+|||.+.......    ....++..|+|||.+.+..++.++|+||||+++|+|++ |+.||.+.+..
T Consensus       141 ---------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~  211 (261)
T cd05034         141 ---------VCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR  211 (261)
T ss_pred             ---------CEEECccccceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence                     45555555554332111    11124568999999998889999999999999999999 99999876655


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      .....+.....                        .+                        .+...+.++.+++.+||+.
T Consensus       212 ~~~~~~~~~~~------------------------~~------------------------~~~~~~~~~~~~i~~~l~~  243 (261)
T cd05034         212 EVLEQVERGYR------------------------MP------------------------RPPNCPEELYDLMLQCWDK  243 (261)
T ss_pred             HHHHHHHcCCC------------------------CC------------------------CCCCCCHHHHHHHHHHccc
Confidence            44433221100                        00                        1123456899999999999


Q ss_pred             CCCCCCCHHHHhc
Q 013973          410 DPTDRLTAREALR  422 (433)
Q Consensus       410 dP~~R~ta~ell~  422 (433)
                      ||++||+++++++
T Consensus       244 ~p~~Rp~~~~l~~  256 (261)
T cd05034         244 DPEERPTFEYLQS  256 (261)
T ss_pred             CcccCCCHHHHHH
Confidence            9999999999874

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=6.5e-41  Score=292.87  Aligned_cols=250  Identities=24%  Similarity=0.312  Sum_probs=197.6

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec-----C
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY-----R  170 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~-----~  170 (433)
                      ++|.+.+.||+|||+.||++.+..+++.||+|.+.... +..+..++|++..+++     ++||++++++....     .
T Consensus        21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf-----~s~~vl~l~dh~l~~~~D~~   95 (302)
T KOG2345|consen   21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKF-----NSPNVLRLVDHQLREEKDGK   95 (302)
T ss_pred             ceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhh-----CCcchHHHHHHHHHhhccCc
Confidence            68999999999999999999999999999999987544 6677788999999888     67889888876533     3


Q ss_pred             CeEEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCceEeeccCccccCCCcC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLC--MIHTDLKPENVLLVSSEYIKVPDYKS  245 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlKp~NILl~~~~~~~i~dfg~  245 (433)
                      ...||+++|. .|+|.+.++..  .+..+++.+++.|+.+|++||++||+..  +.||||||.|||+.+           
T Consensus        96 ~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~-----------  164 (302)
T KOG2345|consen   96 HEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSD-----------  164 (302)
T ss_pred             eeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecC-----------
Confidence            4699999998 89999998743  2346999999999999999999999998  999999999999954           


Q ss_pred             CCCCCCCCcccccCCCCCCEEEEecCCccccCCCCC------------ceeecCcccchhhhhC---CCCCCcchhHHHH
Q 013973          246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN------------YIVSTRHYRAPEVILG---LGWTYPCDIWSVG  310 (433)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~------------~~~gt~~y~aPE~~~~---~~~~~~~DvwSlG  310 (433)
                                      .+.++|.|||.++...-.-.            .-..|..|.|||.+.-   ...+.++||||||
T Consensus       165 ----------------~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLG  228 (302)
T KOG2345|consen  165 ----------------SGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLG  228 (302)
T ss_pred             ----------------CCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhh
Confidence                            45677777877664332110            1135889999999974   4578999999999


Q ss_pred             HHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhh
Q 013973          311 CILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ  390 (433)
Q Consensus       311 v~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (433)
                      |++|+|+.|..||...-.         .-|            ...--+..+.+.||..                      
T Consensus       229 CtLYa~mf~~sPfe~~~~---------~Gg------------SlaLAv~n~q~s~P~~----------------------  265 (302)
T KOG2345|consen  229 CTLYAMMFGESPFERIYQ---------QGG------------SLALAVQNAQISIPNS----------------------  265 (302)
T ss_pred             HHHHHHHHcCCcchHHhh---------cCC------------eEEEeeeccccccCCC----------------------
Confidence            999999999999963110         000            0011133455555553                      


Q ss_pred             hcCCchhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          391 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       391 ~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                        ..+|..+.+||.+||+.||.+||++.+++.+
T Consensus       266 --~~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  266 --SRYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             --CCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence              2467789999999999999999999999864

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=6.7e-40  Score=308.20  Aligned_cols=251  Identities=22%  Similarity=0.309  Sum_probs=193.6

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCC---CeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRER---KEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~---~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      ++|++.+.||+|+||.||+|.++.+   ...||+|+++..  ......+..|+.+++.+     .|++++++++++...+
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~   78 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQF-----DHPNIIRLEGVVTKSR   78 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhC-----CCCCcceEeEEEecCC
Confidence            5699999999999999999998654   457999998643  23345567788888887     6688999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      ..++||||+ +++|.+++.... ..+++..+..++.|++.||.|||++||+|+||||+|||+++++.++++|||++....
T Consensus        79 ~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~  157 (266)
T cd05033          79 PVMIITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLE  157 (266)
T ss_pred             ceEEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccc
Confidence            999999999 889999997654 368999999999999999999999999999999999999766655555555443332


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChH
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  329 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~  329 (433)
                      .....         ..             .....++..|+|||.+.+..++.++||||||+++|+|++ |..||......
T Consensus       158 ~~~~~---------~~-------------~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~  215 (266)
T cd05033         158 DSEAT---------YT-------------TKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ  215 (266)
T ss_pred             ccccc---------ee-------------ccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH
Confidence            10000         00             001134678999999998899999999999999999998 99999765554


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +....+....                      ...                          .+...+..+.+|+.+||+.
T Consensus       216 ~~~~~~~~~~----------------------~~~--------------------------~~~~~~~~l~~li~~cl~~  247 (266)
T cd05033         216 DVIKAVEDGY----------------------RLP--------------------------PPMDCPSALYQLMLDCWQK  247 (266)
T ss_pred             HHHHHHHcCC----------------------CCC--------------------------CCCCCCHHHHHHHHHHcCC
Confidence            4333221100                      000                          0124466899999999999


Q ss_pred             CCCCCCCHHHHhcC
Q 013973          410 DPTDRLTAREALRH  423 (433)
Q Consensus       410 dP~~R~ta~ell~h  423 (433)
                      ||++||++.|++++
T Consensus       248 ~p~~Rp~~~ei~~~  261 (266)
T cd05033         248 DRNERPTFSQIVST  261 (266)
T ss_pred             CcccCcCHHHHHHH
Confidence            99999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=6e-40  Score=313.15  Aligned_cols=251  Identities=26%  Similarity=0.449  Sum_probs=198.4

Q ss_pred             EEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEE
Q 013973           99 YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  177 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~  177 (433)
                      |....+||+|+||.||++.+..+++.||+|.+... ......+..|+.+++.+     +|++++++++.+...+..++||
T Consensus        22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~   96 (292)
T cd06657          22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-----QHENVVEMYNSYLVGDELWVVM   96 (292)
T ss_pred             hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhc-----CCcchhheeeEEEeCCEEEEEE
Confidence            44457899999999999999999999999988532 23345567788888877     6688999999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCccc
Q 013973          178 EKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  256 (433)
Q Consensus       178 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~  256 (433)
                      ||+ +++|.+++...   .+++..+..++.|++.||+|||+.||+|+||||+||+++.++                    
T Consensus        97 e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~--------------------  153 (292)
T cd06657          97 EFLEGGALTDIVTHT---RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDG--------------------  153 (292)
T ss_pred             ecCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--------------------
Confidence            999 88999887543   589999999999999999999999999999999999996544                    


Q ss_pred             ccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 013973          257 KRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA  333 (433)
Q Consensus       257 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~  333 (433)
                             .++|+|||.+......   .....||+.|+|||.+.+..++.++|+||||+++|+|++|..||.+....+...
T Consensus       154 -------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~  226 (292)
T cd06657         154 -------RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK  226 (292)
T ss_pred             -------CEEEcccccceecccccccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence                   4555555554322211   122468899999999988889999999999999999999999998765544433


Q ss_pred             HHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCC
Q 013973          334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  413 (433)
Q Consensus       334 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  413 (433)
                      .+.......                                              .......+..+.+++.+||+.||.+
T Consensus       227 ~~~~~~~~~----------------------------------------------~~~~~~~~~~l~~li~~~l~~~P~~  260 (292)
T cd06657         227 MIRDNLPPK----------------------------------------------LKNLHKVSPSLKGFLDRLLVRDPAQ  260 (292)
T ss_pred             HHHhhCCcc----------------------------------------------cCCcccCCHHHHHHHHHHHhCCccc
Confidence            222111000                                              0001234667899999999999999


Q ss_pred             CCCHHHHhcCCCCCCCC
Q 013973          414 RLTAREALRHPFFTRDH  430 (433)
Q Consensus       414 R~ta~ell~hp~f~~~~  430 (433)
                      ||++.++++||||....
T Consensus       261 R~~~~~ll~~~~~~~~~  277 (292)
T cd06657         261 RATAAELLKHPFLAKAG  277 (292)
T ss_pred             CcCHHHHhcChHHhccC
Confidence            99999999999997653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=5.2e-40  Score=314.25  Aligned_cols=248  Identities=22%  Similarity=0.289  Sum_probs=191.1

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCe--EEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKE--MVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~--~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++.+.||+|+||.||+|.+..++.  .+|+|.++..  ....+.+..|+.++.++.    +|++++++++.+...+.
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~----~hp~iv~~~~~~~~~~~   77 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLG----HHPNIINLLGACENRGY   77 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhc----CCCchhheEEEEccCCc
Confidence            469999999999999999999887764  4688887632  233455677888888773    46789999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCc
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNY--------------RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEY  237 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~  237 (433)
                      +++||||+ +++|.+++.....              ..+++..+..++.||+.||+|||+.||+||||||+|||++.++.
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~  157 (297)
T cd05089          78 LYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLA  157 (297)
T ss_pred             ceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCe
Confidence            99999999 8999999975321              25889999999999999999999999999999999999965544


Q ss_pred             cccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC--CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHH
Q 013973          238 IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE  315 (433)
Q Consensus       238 ~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~e  315 (433)
                                                 +||+|||++......  ......+..|+|||++.+..++.++|||||||++||
T Consensus       158 ---------------------------~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~e  210 (297)
T cd05089         158 ---------------------------SKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWE  210 (297)
T ss_pred             ---------------------------EEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHH
Confidence                                       555555554321111  111123557999999998889999999999999999


Q ss_pred             HHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCC
Q 013973          316 LCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH  394 (433)
Q Consensus       316 llt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (433)
                      |++ |..||......+....+.....                                                ...+..
T Consensus       211 l~t~g~~pf~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~  242 (297)
T cd05089         211 IVSLGGTPYCGMTCAELYEKLPQGYR------------------------------------------------MEKPRN  242 (297)
T ss_pred             HHcCCCCCCCCCCHHHHHHHHhcCCC------------------------------------------------CCCCCC
Confidence            997 9999987655443332111000                                                001224


Q ss_pred             chhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          395 SAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       395 ~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                      ++.++.+|+.+||+.||.+||+++++++.
T Consensus       243 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         243 CDDEVYELMRQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            56789999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.2e-39  Score=308.15  Aligned_cols=247  Identities=23%  Similarity=0.342  Sum_probs=193.3

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCC-----CeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRER-----KEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~-----~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      .++|++.+.||+|+||.||+|.++..     +..||+|.+....  .....+..|+.+++.+     .|++++++++++.
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~   79 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEF-----NCHHVVRLLGVVS   79 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhC-----CCCceeEEEEEEc
Confidence            46799999999999999999988654     3789999986432  2334566788888777     6788999999999


Q ss_pred             cCCeEEEEEecC-CCCHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccc
Q 013973          169 YRNHICIVFEKL-GSSLYDFLRKNN--------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIK  239 (433)
Q Consensus       169 ~~~~~~lV~e~~-~~~L~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~  239 (433)
                      .....++||||+ +++|.+++....        ...+++..+..++.||+.||.|||+.+|+||||||+|||++.++.  
T Consensus        80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~--  157 (277)
T cd05032          80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLT--  157 (277)
T ss_pred             CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCC--
Confidence            999999999999 899999997532        124788899999999999999999999999999999999965554  


Q ss_pred             cCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhCCCCCCcchhHHHHHHHH
Q 013973          240 VPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILV  314 (433)
Q Consensus       240 i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~  314 (433)
                                               +||+|||+++.....     .....+|..|+|||.+.+..++.++|||||||++|
T Consensus       158 -------------------------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  212 (277)
T cd05032         158 -------------------------VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLW  212 (277)
T ss_pred             -------------------------EEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHH
Confidence                                     555555554322211     11234678899999999888999999999999999


Q ss_pred             HHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcC
Q 013973          315 ELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD  393 (433)
Q Consensus       315 ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (433)
                      ||++ |..||.+.+..+....+..  +                    ...                          ..+.
T Consensus       213 el~t~g~~p~~~~~~~~~~~~~~~--~--------------------~~~--------------------------~~~~  244 (277)
T cd05032         213 EMATLAEQPYQGLSNEEVLKFVID--G--------------------GHL--------------------------DLPE  244 (277)
T ss_pred             HhhccCCCCCccCCHHHHHHHHhc--C--------------------CCC--------------------------CCCC
Confidence            9998 9999987665444332210  0                    000                          0123


Q ss_pred             CchhHHHHHHHhccccCCCCCCCHHHHhc
Q 013973          394 HSAGDLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       394 ~~~~~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                      .++.++.+|+.+||+.+|++|||+.++++
T Consensus       245 ~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         245 NCPDKLLELMRMCWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             CCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            45678999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=9.7e-40  Score=311.15  Aligned_cols=255  Identities=24%  Similarity=0.427  Sum_probs=197.4

Q ss_pred             cEEEEeeeeccccEEEEEEEEC---CCCeEEEEEEeecch-----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           98 RYKIHSKMGEGTFGQVLECWDR---ERKEMVAIKIVRGIK-----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~---~~~~~vAiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      +|++.+.||+|+||.||+|.+.   .+|+.||+|+++...     ...+....|+.++..+.    +|++|+.+++.++.
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~----~~~~i~~~~~~~~~   76 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR----QSPFLVTLHYAFQT   76 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcc----cCCChhceeeEeec
Confidence            4889999999999999999875   478899999987422     22345667888888774    35789999999999


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      +..+|+||||+ +++|.+++....  .+++..+..++.||+.||.|||+.|++||||||+|||++.              
T Consensus        77 ~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~--------------  140 (290)
T cd05613          77 DTKLHLILDYINGGELFTHLSQRE--RFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDS--------------  140 (290)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECC--------------
Confidence            99999999999 899999998754  6899999999999999999999999999999999999954              


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCC--CCCCcchhHHHHHHHHHHHhCCCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGL--GWTYPCDIWSVGCILVELCTGEAL  322 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGv~l~elltg~~P  322 (433)
                                   ++.++|+|||++.......    ....|+..|+|||.+.+.  .++.++||||||+++|+|++|..|
T Consensus       141 -------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p  207 (290)
T cd05613         141 -------------NGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASP  207 (290)
T ss_pred             -------------CCCEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCC
Confidence                         4456666666655332211    224689999999998753  477899999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       323 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      |...........+...                   +....                          ...+..++..+.+|
T Consensus       208 ~~~~~~~~~~~~~~~~-------------------~~~~~--------------------------~~~~~~~~~~~~~l  242 (290)
T cd05613         208 FTVDGEKNSQAEISRR-------------------ILKSE--------------------------PPYPQEMSALAKDI  242 (290)
T ss_pred             CCcCCccccHHHHHHH-------------------hhccC--------------------------CCCCccCCHHHHHH
Confidence            9643322111111110                   00000                          01123456788999


Q ss_pred             HHhccccCCCCCC-----CHHHHhcCCCCCCCC
Q 013973          403 LQGLLRYDPTDRL-----TAREALRHPFFTRDH  430 (433)
Q Consensus       403 i~~~L~~dP~~R~-----ta~ell~hp~f~~~~  430 (433)
                      +.+||+.||++|+     ++.+++.||||+...
T Consensus       243 l~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~  275 (290)
T cd05613         243 IQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN  275 (290)
T ss_pred             HHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence            9999999999997     899999999998653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=1.5e-39  Score=311.87  Aligned_cols=254  Identities=22%  Similarity=0.364  Sum_probs=193.0

Q ss_pred             cCcEEEEeeeeccccEEEEEEEE-----CCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWD-----RERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~-----~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      .++|.+.+.||+|+||.||+|.+     ..++..||+|+++...  ...+.+..|+.+++++.    .|+||+++++.+.
T Consensus        34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----~h~~iv~~~~~~~  109 (302)
T cd05055          34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLG----NHENIVNLLGACT  109 (302)
T ss_pred             HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhcc----CCCCcceEEEEEe
Confidence            35799999999999999999975     3455689999987432  33455678999988873    3578999999999


Q ss_pred             cCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC
Q 013973          169 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       169 ~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                      ..+.+++||||+ +++|.+++.......+++..+..++.||+.||.|||+++|+|+||||+|||++.++.++++|||++.
T Consensus       110 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~  189 (302)
T cd05055         110 IGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLAR  189 (302)
T ss_pred             cCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccc
Confidence            999999999999 8999999986554458999999999999999999999999999999999999655555555555443


Q ss_pred             CCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 013973          248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH  326 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~  326 (433)
                      ........                      .......++..|+|||++.+..++.++|||||||++|+|++ |..||...
T Consensus       190 ~~~~~~~~----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~  247 (302)
T cd05055         190 DIMNDSNY----------------------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGM  247 (302)
T ss_pred             cccCCCce----------------------eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCC
Confidence            22111000                      00011235778999999999899999999999999999998 99999865


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      ...+.+.....                      .+. ..                        ..+...+.++.+|+.+|
T Consensus       248 ~~~~~~~~~~~----------------------~~~-~~------------------------~~~~~~~~~~~~li~~c  280 (302)
T cd05055         248 PVDSKFYKLIK----------------------EGY-RM------------------------AQPEHAPAEIYDIMKTC  280 (302)
T ss_pred             CchHHHHHHHH----------------------cCC-cC------------------------CCCCCCCHHHHHHHHHH
Confidence            54332221110                      000 00                        01123466899999999


Q ss_pred             cccCCCCCCCHHHHhc
Q 013973          407 LRYDPTDRLTAREALR  422 (433)
Q Consensus       407 L~~dP~~R~ta~ell~  422 (433)
                      |+.+|++|||+.|+++
T Consensus       281 l~~~p~~Rpt~~ell~  296 (302)
T cd05055         281 WDADPLKRPTFKQIVQ  296 (302)
T ss_pred             cCCCchhCcCHHHHHH
Confidence            9999999999999975

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=1e-39  Score=311.67  Aligned_cols=253  Identities=24%  Similarity=0.350  Sum_probs=194.1

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCC----------------eEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCC
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERK----------------EMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGN  158 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~----------------~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~  158 (433)
                      ++|++++.||+|+||.||+|.+..++                ..||+|.+...  ....+.+..|+.+++++     .|+
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l-----~~~   79 (296)
T cd05051           5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRL-----SDP   79 (296)
T ss_pred             hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhc-----CCC
Confidence            57999999999999999999876544                56899998743  23456677899999988     568


Q ss_pred             ceEEecceeecCCeEEEEEecC-CCCHHHHHHhcC---------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCC
Q 013973          159 RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNN---------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPE  228 (433)
Q Consensus       159 ~i~~~~~~~~~~~~~~lV~e~~-~~~L~~~l~~~~---------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~  228 (433)
                      +++++++++...+..++|||++ +++|.+++....         ...+++..+..++.|++.||.|||+.||+||||||+
T Consensus        80 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~  159 (296)
T cd05051          80 NIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATR  159 (296)
T ss_pred             CEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchh
Confidence            8999999999999999999999 899999997643         126899999999999999999999999999999999


Q ss_pred             ceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhCCCCCCc
Q 013973          229 NVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYP  303 (433)
Q Consensus       229 NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~  303 (433)
                      ||+++.++.+                           +|+|||.+......     .....+|..|+|||++.+..++.+
T Consensus       160 Nili~~~~~~---------------------------~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  212 (296)
T cd05051         160 NCLVGKNYTI---------------------------KIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTK  212 (296)
T ss_pred             ceeecCCCce---------------------------EEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCcc
Confidence            9999665554                           55555544322111     112346788999999998889999


Q ss_pred             chhHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccc
Q 013973          304 CDIWSVGCILVELCT--GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL  381 (433)
Q Consensus       304 ~DvwSlGv~l~ellt--g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  381 (433)
                      +|||||||++|||++  |..||...+..+.+..+......                  .+...                 
T Consensus       213 ~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~------------------~~~~~-----------------  257 (296)
T cd05051         213 SDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRD------------------DGRQI-----------------  257 (296)
T ss_pred             chhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhcccc------------------ccccc-----------------
Confidence            999999999999998  77888766554443332211100                  00000                 


Q ss_pred             hhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhc
Q 013973          382 PRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                            ....+..++.++.+|+.+||+.||++|||+.|+++
T Consensus       258 ------~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         258 ------YLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             ------cCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence                  00012345678999999999999999999999965

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=9.4e-40  Score=314.19  Aligned_cols=252  Identities=26%  Similarity=0.385  Sum_probs=198.8

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ..|...+.||+|+||.||+|+++.+++.+|+|.+...    ......+..|+.+++.+     .|++++++.+++.....
T Consensus        15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~   89 (308)
T cd06634          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-----RHPNTIQYRGCYLREHT   89 (308)
T ss_pred             HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhC-----CCCCcccEEEEEEcCCe
Confidence            4588889999999999999999999999999988632    22334566788888887     56889999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          173 ICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       173 ~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      .++||||+.++|.+++.... ..+++..+..++.|++.||.|||+.+++||||||+|||++.++                
T Consensus        90 ~~lv~e~~~~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~----------------  152 (308)
T cd06634          90 AWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG----------------  152 (308)
T ss_pred             eEEEEEccCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCC----------------
Confidence            99999999778888876543 4689999999999999999999999999999999999995444                


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhh---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCChH
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHENL  329 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~  329 (433)
                                 .++|+|||.+...... ....|+..|+|||++.   ...++.++|||||||++|+|++|..||...+..
T Consensus       153 -----------~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~  220 (308)
T cd06634         153 -----------LVKLGDFGSASIMAPA-NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM  220 (308)
T ss_pred             -----------cEEECCcccceeecCc-ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH
Confidence                       5666666655433322 2346889999999985   346788999999999999999999999765443


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +....+.....  +                    ..                         ....++..+.+||.+||+.
T Consensus       221 ~~~~~~~~~~~--~--------------------~~-------------------------~~~~~~~~~~~li~~cl~~  253 (308)
T cd06634         221 SALYHIAQNES--P--------------------AL-------------------------QSGHWSEYFRNFVDSCLQK  253 (308)
T ss_pred             HHHHHHhhcCC--C--------------------Cc-------------------------CcccccHHHHHHHHHHhhC
Confidence            33322111000  0                    00                         0124566789999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCC
Q 013973          410 DPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       410 dP~~R~ta~ell~hp~f~~~  429 (433)
                      +|++||++.++++|||+...
T Consensus       254 ~P~~Rp~~~~ll~~~~~~~~  273 (308)
T cd06634         254 IPQDRPTSEVLLKHRFVLRE  273 (308)
T ss_pred             CcccCCCHHHHhhCcccccc
Confidence            99999999999999999764

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=2.6e-39  Score=301.81  Aligned_cols=249  Identities=28%  Similarity=0.452  Sum_probs=200.4

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      +|++.+.||+|+||.||++.++.+++.||+|.+...   .........|+.+++.+     .|++++.+.+.+......+
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~   75 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASV-----NHPNIISYKEAFLDGNKLC   75 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhC-----CCCCchhhhhhhccCCEEE
Confidence            489999999999999999999999999999998643   23344556788888877     5688999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +||||+ +++|.+++...  ....+++..+..++.|++.||.|||+.|++|+||||+||++++                 
T Consensus        76 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~-----------------  138 (256)
T cd08530          76 IVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVA-----------------  138 (256)
T ss_pred             EEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEec-----------------
Confidence            999999 88999998762  1246899999999999999999999999999999999999954                 


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCC-CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                                ++.+||+|||.+....... ....|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+..+
T Consensus       139 ----------~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~  208 (256)
T cd08530         139 ----------NDLVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD  208 (256)
T ss_pred             ----------CCcEEEeeccchhhhccCCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                      3456777777665433221 22357889999999999889999999999999999999999998766544


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+..                       +.+  +                       ..+..++.++.+++.+||+.+
T Consensus       209 ~~~~~~~-----------------------~~~--~-----------------------~~~~~~~~~~~~li~~~l~~~  240 (256)
T cd08530         209 LRYKVQR-----------------------GKY--P-----------------------PIPPIYSQDLQNFIRSMLQVK  240 (256)
T ss_pred             HHHHHhc-----------------------CCC--C-----------------------CCchhhCHHHHHHHHHHcCCC
Confidence            3322111                       000  0                       011234567999999999999


Q ss_pred             CCCCCCHHHHhcCCCC
Q 013973          411 PTDRLTAREALRHPFF  426 (433)
Q Consensus       411 P~~R~ta~ell~hp~f  426 (433)
                      |++||++.|+++||++
T Consensus       241 p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         241 PKLRPNCDKILASPAV  256 (256)
T ss_pred             cccCCCHHHHhcCCCC
Confidence            9999999999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=1.6e-39  Score=310.01  Aligned_cols=246  Identities=22%  Similarity=0.358  Sum_probs=192.1

Q ss_pred             CcEEEEeeeeccccEEEEEEEEC-----CCCeEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~-----~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      .+|.+.+.||+|+||.||+|...     .++..+|+|.+.... .....+..|+.+++.+     .|++|+++++++...
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~   79 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL-----QHEHIVKFYGVCGDG   79 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcC-----CCCCcceEEEEEccC
Confidence            45999999999999999999854     355679999986433 2335577888888887     668899999999999


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeecc
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNN--------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSS  235 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~  235 (433)
                      ...++||||+ +++|.+++....              ...+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~  159 (291)
T cd05094          80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN  159 (291)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC
Confidence            9999999999 999999997643              1348899999999999999999999999999999999999665


Q ss_pred             CccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhCCCCCCcchhHHHH
Q 013973          236 EYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYPCDIWSVG  310 (433)
Q Consensus       236 ~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG  310 (433)
                      +.++++|||                           .+......     .....|+..|+|||++.+..++.++||||||
T Consensus       160 ~~~~l~dfg---------------------------~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  212 (291)
T cd05094         160 LLVKIGDFG---------------------------MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFG  212 (291)
T ss_pred             CcEEECCCC---------------------------cccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHH
Confidence            555555554                           44322111     1123467889999999999999999999999


Q ss_pred             HHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHh
Q 013973          311 CILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM  389 (433)
Q Consensus       311 v~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (433)
                      |++|||++ |..||......+....+.                       .+...                         
T Consensus       213 ~il~el~t~g~~p~~~~~~~~~~~~~~-----------------------~~~~~-------------------------  244 (291)
T cd05094         213 VILWEIFTYGKQPWFQLSNTEVIECIT-----------------------QGRVL-------------------------  244 (291)
T ss_pred             HHHHHHHhCCCCCCCCCCHHHHHHHHh-----------------------CCCCC-------------------------
Confidence            99999999 999997765544332211                       11000                         


Q ss_pred             hhcCCchhHHHHHHHhccccCCCCCCCHHHHhc
Q 013973          390 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       390 ~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                      ..+...+.++.+|+.+||+.||++|||+.++++
T Consensus       245 ~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~  277 (291)
T cd05094         245 ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK  277 (291)
T ss_pred             CCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence            011235668999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=1.6e-39  Score=307.83  Aligned_cols=245  Identities=22%  Similarity=0.281  Sum_probs=188.0

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCe----EEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKE----MVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~----~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      ..+|++++.||+|+||+||+|.+..+++    .||+|+++..  ......+..|+.+++.+     +|+|++.+++++..
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~   80 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGV-----GSPYVCRLLGICLT   80 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhc-----CCCCCceEEEEEcC
Confidence            3579999999999999999999877665    4899998642  23345566777777766     67889999988765


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                       ...+++|||+ +|+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||+++++.           
T Consensus        81 -~~~~l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~-----------  147 (279)
T cd05109          81 -STVQLVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNH-----------  147 (279)
T ss_pred             -CCcEEEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCc-----------
Confidence             4578999999 899999997643 46999999999999999999999999999999999999965444           


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCCC-----ceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN-----YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEAL  322 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P  322 (433)
                                      +||+|||++........     ...++..|+|||.+.+..++.++|||||||++|||++ |..|
T Consensus       148 ----------------~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p  211 (279)
T cd05109         148 ----------------VKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKP  211 (279)
T ss_pred             ----------------EEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCC
Confidence                            55555555543322111     1134678999999999899999999999999999998 9999


Q ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       323 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      |...........+..                       +.. .                        ..+...+.++.++
T Consensus       212 ~~~~~~~~~~~~~~~-----------------------~~~-~------------------------~~~~~~~~~~~~l  243 (279)
T cd05109         212 YDGIPAREIPDLLEK-----------------------GER-L------------------------PQPPICTIDVYMI  243 (279)
T ss_pred             CCCCCHHHHHHHHHC-----------------------CCc-C------------------------CCCccCCHHHHHH
Confidence            976554433222111                       000 0                        0112456688999


Q ss_pred             HHhccccCCCCCCCHHHHhc
Q 013973          403 LQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       403 i~~~L~~dP~~R~ta~ell~  422 (433)
                      +.+||+.||++||++.+++.
T Consensus       244 i~~~l~~dp~~Rp~~~~l~~  263 (279)
T cd05109         244 MVKCWMIDSECRPRFRELVD  263 (279)
T ss_pred             HHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999984

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=3e-40  Score=309.37  Aligned_cols=245  Identities=24%  Similarity=0.349  Sum_probs=191.6

Q ss_pred             eeeeccccEEEEEEEECCCCe-------EEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973          103 SKMGEGTFGQVLECWDRERKE-------MVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~-------~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      +.||+|+||.||+|.++..+.       .||+|.+.... ...+.+..|..+++.+     .|+|++++++.+......+
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~-----~h~~iv~~~~~~~~~~~~~   75 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQL-----SHKHLVLNYGVCVCGDESI   75 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhC-----CCCChhheeeEEEeCCCcE
Confidence            468999999999998865543       38888876432 2334566677777776     6789999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +||||+ +|+|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++..+++++          
T Consensus        76 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~----------  144 (258)
T cd05078          76 MVQEYVKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNP----------  144 (258)
T ss_pred             EEEecCCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCC----------
Confidence            999999 889999998654 36899999999999999999999999999999999999988776655443          


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhC-CCCCCCCChHHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTG-EALFQTHENLEH  331 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg-~~Pf~~~~~~~~  331 (433)
                               ..++++|||.+...... ....++..|+|||++.+ ..++.++|||||||++|||++| ..||...+....
T Consensus       145 ---------~~~~l~d~g~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~  214 (258)
T cd05078         145 ---------PFIKLSDPGISITVLPK-EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK  214 (258)
T ss_pred             ---------ceEEecccccccccCCc-hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH
Confidence                     35899999988654432 33568899999999987 4589999999999999999998 466655443322


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      .....                        ..                          ...+...+.++.+||.+||+.||
T Consensus       215 ~~~~~------------------------~~--------------------------~~~~~~~~~~~~~li~~~l~~~p  244 (258)
T cd05078         215 LQFYE------------------------DR--------------------------HQLPAPKWTELANLINQCMDYEP  244 (258)
T ss_pred             HHHHH------------------------cc--------------------------ccCCCCCcHHHHHHHHHHhccCh
Confidence            11100                        00                          01122344678999999999999


Q ss_pred             CCCCCHHHHhcC
Q 013973          412 TDRLTAREALRH  423 (433)
Q Consensus       412 ~~R~ta~ell~h  423 (433)
                      ++|||++++++.
T Consensus       245 ~~Rps~~~il~~  256 (258)
T cd05078         245 DFRPSFRAIIRD  256 (258)
T ss_pred             hhCCCHHHHHHh
Confidence            999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=4.3e-39  Score=302.42  Aligned_cols=246  Identities=26%  Similarity=0.415  Sum_probs=194.3

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.++..    ......+..|+++++++     .|++++.+++.+...+.
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~-----~~~~i~~~~~~~~~~~~   76 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL-----DHPNVIKYLASFIENNE   76 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhC-----CCCCeeeeeeeeecCCe
Confidence            5699999999999999999999999999999988532    22345677899988888     66889999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      .++||||+ +++|.+++...  ....+++..+..++.|++.||.|||+.||+|+||||+||+++.+              
T Consensus        77 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~--------------  142 (267)
T cd08224          77 LNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITAT--------------  142 (267)
T ss_pred             EEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCC--------------
Confidence            99999999 88999998653  23468999999999999999999999999999999999999544              


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                                   +.++|+|||.+......   .....|+..|+|||.+.+..++.++|+|||||++|+|++|..||...
T Consensus       143 -------------~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  209 (267)
T cd08224         143 -------------GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD  209 (267)
T ss_pred             -------------CcEEEeccceeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccC
Confidence                         45666666655433221   12246888999999999888999999999999999999999999654


Q ss_pred             ChH--HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhc-CCchhHHHHHH
Q 013973          327 ENL--EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV-DHSAGDLTHLL  403 (433)
Q Consensus       327 ~~~--~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li  403 (433)
                      ...  +....+                       ..+..  +                       ..+ ..++.++.++|
T Consensus       210 ~~~~~~~~~~~-----------------------~~~~~--~-----------------------~~~~~~~~~~~~~~i  241 (267)
T cd08224         210 KMNLYSLCKKI-----------------------EKCDY--P-----------------------PLPADHYSEELRDLV  241 (267)
T ss_pred             CccHHHHHhhh-----------------------hcCCC--C-----------------------CCChhhcCHHHHHHH
Confidence            311  111100                       00000  0                       000 13456889999


Q ss_pred             HhccccCCCCCCCHHHHhc
Q 013973          404 QGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~  422 (433)
                      .+||+.+|++|||+.++++
T Consensus       242 ~~cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         242 SRCINPDPEKRPDISYVLQ  260 (267)
T ss_pred             HHHcCCCcccCCCHHHHHH
Confidence            9999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=8.3e-40  Score=307.55  Aligned_cols=247  Identities=26%  Similarity=0.395  Sum_probs=193.1

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++.+.||+|+||.||+|.+..+++.||||.+...    ......+..|+.+++.+     .|+|++++++.+...+.
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~~~~~~~~~~~~   76 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-----NHPNVIKYYASFIEDNE   76 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHc-----cCCchhhhhheeEeCCe
Confidence            4588999999999999999999999999999987532    22345667788888887     67889999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      .++||||+ +++|.+++...  ....+++..+..++.||+.||.|||++||+|+||||+||+++.++             
T Consensus        77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~-------------  143 (267)
T cd08229          77 LNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATG-------------  143 (267)
T ss_pred             EEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC-------------
Confidence            99999999 88999988742  224689999999999999999999999999999999999996544             


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                                    .++|+|||.+.......   ....|+..|+|||++.+..++.++|+||||+++|+|++|..||.+.
T Consensus       144 --------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~  209 (267)
T cd08229         144 --------------VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD  209 (267)
T ss_pred             --------------CEEECcchhhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccc
Confidence                          45556666554332211   2246889999999999888999999999999999999999999754


Q ss_pred             ChH--HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHH
Q 013973          327 ENL--EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  404 (433)
Q Consensus       327 ~~~--~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  404 (433)
                      ...  +....+                       ....  ++.                      ......+.++.+||.
T Consensus       210 ~~~~~~~~~~~-----------------------~~~~--~~~----------------------~~~~~~~~~~~~li~  242 (267)
T cd08229         210 KMNLYSLCKKI-----------------------EQCD--YPP----------------------LPSDHYSEELRQLVN  242 (267)
T ss_pred             cchHHHHhhhh-----------------------hcCC--CCC----------------------CCcccccHHHHHHHH
Confidence            321  111110                       0000  000                      001245678999999


Q ss_pred             hccccCCCCCCCHHHHhc
Q 013973          405 GLLRYDPTDRLTAREALR  422 (433)
Q Consensus       405 ~~L~~dP~~R~ta~ell~  422 (433)
                      +||+.||++|||+.+|++
T Consensus       243 ~~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         243 MCINPDPEKRPDITYVYD  260 (267)
T ss_pred             HhcCCCcccCCCHHHHHH
Confidence            999999999999997764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=1.5e-39  Score=310.30  Aligned_cols=249  Identities=22%  Similarity=0.338  Sum_probs=193.2

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCC-----CeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRER-----KEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~-----~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      .++|++.+.||+|+||.||++.....     ...+|+|.+...  ......+..|+.+++++.    .|++++++++.+.
T Consensus        11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~----~h~~i~~~~~~~~   86 (293)
T cd05053          11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIG----KHKNIINLLGVCT   86 (293)
T ss_pred             HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhc----CCCCeeeEEEEEc
Confidence            36799999999999999999987644     378999998743  223345677888888773    4578999999999


Q ss_pred             cCCeEEEEEecC-CCCHHHHHHhc--------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEee
Q 013973          169 YRNHICIVFEKL-GSSLYDFLRKN--------------NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV  233 (433)
Q Consensus       169 ~~~~~~lV~e~~-~~~L~~~l~~~--------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~  233 (433)
                      ..+.+++||||+ +++|.+++...              ....+++..+..++.|++.||.|||+.||+||||||+|||++
T Consensus        87 ~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~  166 (293)
T cd05053          87 QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVT  166 (293)
T ss_pred             CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEc
Confidence            999999999999 89999999752              234689999999999999999999999999999999999996


Q ss_pred             ccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHH
Q 013973          234 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWS  308 (433)
Q Consensus       234 ~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwS  308 (433)
                      .++.                           +||+|||.+.......     ....++..|+|||++.+..++.++||||
T Consensus       167 ~~~~---------------------------~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s  219 (293)
T cd05053         167 EDHV---------------------------MKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWS  219 (293)
T ss_pred             CCCe---------------------------EEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceee
Confidence            5554                           5555555554322211     1113456799999999889999999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHH
Q 013973          309 VGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL  387 (433)
Q Consensus       309 lGv~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (433)
                      |||++|||++ |..||......+....+....                      ..                        
T Consensus       220 lG~il~el~~~g~~p~~~~~~~~~~~~~~~~~----------------------~~------------------------  253 (293)
T cd05053         220 FGVLLWEIFTLGGSPYPGIPVEELFKLLKEGY----------------------RM------------------------  253 (293)
T ss_pred             hhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCC----------------------cC------------------------
Confidence            9999999998 999998766544333221100                      00                        


Q ss_pred             HhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       388 ~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                        ..+...+.++.+|+.+||+.||++|||+.|++++
T Consensus       254 --~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         254 --EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             --CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence              0112446689999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=1.1e-39  Score=314.23  Aligned_cols=283  Identities=20%  Similarity=0.236  Sum_probs=194.5

Q ss_pred             ccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecC-CCCH
Q 013973          109 TFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSL  184 (433)
Q Consensus       109 ~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~-~~~L  184 (433)
                      ++|.||.++...+++.||+|+++..   ......+..|+.+++.+     .|+||+++++.+...+..+++|||+ +++|
T Consensus        12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l-----~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l   86 (314)
T cd08216          12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQL-----QHPNILPYVTSFIVDSELYVVSPLMAYGSC   86 (314)
T ss_pred             CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhc-----CCcchhhhhheeecCCeEEEEEeccCCCCH
Confidence            4455666666778999999998643   33445677899999888     5688999999999999999999999 8899


Q ss_pred             HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCC
Q 013973          185 YDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA  264 (433)
Q Consensus       185 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~  264 (433)
                      .+++.......+++..+..++.|++.||+|||+++||||||||+|||++.++.++++|||.+........        ..
T Consensus        87 ~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~--------~~  158 (314)
T cd08216          87 EDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGK--------RQ  158 (314)
T ss_pred             HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccc--------cc
Confidence            9999875445789999999999999999999999999999999999998777777777765443221100        00


Q ss_pred             EEEEecCCccccCCCCCceeecCcccchhhhhCC--CCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Q 013973          265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL--GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL  342 (433)
Q Consensus       265 ~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~  342 (433)
                      ..+         ........++..|+|||++.+.  .++.++|+|||||++|||++|..||.........  +....+..
T Consensus       159 ~~~---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~--~~~~~~~~  227 (314)
T cd08216         159 RVV---------HDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQML--LEKVRGTV  227 (314)
T ss_pred             ccc---------ccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHhccC
Confidence            000         0011223578889999999763  5889999999999999999999999865543322  12222222


Q ss_pred             CHHHHHHHhhhhhhhhccCcccCCCCccchhh-HhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHh
Q 013973          343 PQHMLKRVDRHAEKYVRRGRLDWPEGAASRES-IKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL  421 (433)
Q Consensus       343 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell  421 (433)
                      +..+.            ...  ++........ ....................++.++.+|+.+||+.||++|||+.|+|
T Consensus       228 ~~~~~------------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll  293 (314)
T cd08216         228 PCLLD------------KST--YPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLL  293 (314)
T ss_pred             ccccc------------cCc--hhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHh
Confidence            11100            000  0000000000 00000000000111112234567899999999999999999999999


Q ss_pred             cCCCCCCC
Q 013973          422 RHPFFTRD  429 (433)
Q Consensus       422 ~hp~f~~~  429 (433)
                      +||||+..
T Consensus       294 ~~p~~~~~  301 (314)
T cd08216         294 NHSFFKQC  301 (314)
T ss_pred             cCchHhhh
Confidence            99999854

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=5.6e-40  Score=311.59  Aligned_cols=247  Identities=20%  Similarity=0.258  Sum_probs=192.2

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCC-----CeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRER-----KEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~-----~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      .+|++.+.||+|+||.||+|.+..+     ++.||+|+++...  ...+.+..|+.++..+     .|++|+++++.+..
T Consensus         5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l-----~h~~iv~~~~~~~~   79 (283)
T cd05091           5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRL-----QHPNIVCLLGVVTK   79 (283)
T ss_pred             HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcC-----CCCCcCeEEEEEcC
Confidence            3588899999999999999987543     5789999987432  2234566778777776     67899999999999


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeec
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNN--------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVS  234 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~  234 (433)
                      ....++++||+ +++|.+++....              ...+++..+..++.|++.||.|||++||+||||||+|||+++
T Consensus        80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~  159 (283)
T cd05091          80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFD  159 (283)
T ss_pred             CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecC
Confidence            99999999999 889999986321              135888899999999999999999999999999999999965


Q ss_pred             cCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHH
Q 013973          235 SEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSV  309 (433)
Q Consensus       235 ~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSl  309 (433)
                      ++                           .+||+|||+++......     ....+++.|+|||++.+..++.++|||||
T Consensus       160 ~~---------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~sl  212 (283)
T cd05091         160 KL---------------------------NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSY  212 (283)
T ss_pred             CC---------------------------ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHH
Confidence            44                           45555555544322111     12245778999999998889999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHH
Q 013973          310 GCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI  388 (433)
Q Consensus       310 Gv~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (433)
                      ||++|||++ |..||.+....+....+....                       .                         
T Consensus       213 G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~-----------------------~-------------------------  244 (283)
T cd05091         213 GVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQ-----------------------V-------------------------  244 (283)
T ss_pred             HHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC-----------------------c-------------------------
Confidence            999999998 889998766555443322110                       0                         


Q ss_pred             hhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          389 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       389 ~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                      ...+..++.++.+|+.+||+.||++||++++++..
T Consensus       245 ~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         245 LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence            01123567789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=1.7e-39  Score=303.62  Aligned_cols=241  Identities=25%  Similarity=0.377  Sum_probs=193.7

Q ss_pred             eeeeccccEEEEEEEECCC---CeEEEEEEeecchhh--HHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEE
Q 013973          103 SKMGEGTFGQVLECWDRER---KEMVAIKIVRGIKKY--REAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  177 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~---~~~vAiK~~~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~  177 (433)
                      +.||+|+||.||+|.+...   +..||+|++......  ...+..|+..+..+     .|++++++++++.....+++||
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~~~~~lv~   75 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKL-----GHPNVVRLLGVCTEEEPLYLVL   75 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhc-----CCCChheeeeeecCCCceEEEE
Confidence            4799999999999999866   888999999754332  46677888888888     4688999999999999999999


Q ss_pred             ecC-CCCHHHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          178 EKL-GSSLYDFLRKNN-------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       178 e~~-~~~L~~~l~~~~-------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      ||+ +++|.+++....       ...+++..+..++.|++.||+|||++||+|+||||+||+++.++             
T Consensus        76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~-------------  142 (262)
T cd00192          76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDL-------------  142 (262)
T ss_pred             EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCC-------------
Confidence            999 999999998751       24799999999999999999999999999999999999995544             


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALF  323 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf  323 (433)
                                    .++|+|||.+......     .....++..|+|||.+....++.++|+||||+++|+|++ |..||
T Consensus       143 --------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~  208 (262)
T cd00192         143 --------------VVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPY  208 (262)
T ss_pred             --------------cEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCC
Confidence                          5555555555433322     122357889999999998899999999999999999999 69999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      ......+....+...                      ..                          ...+...+.++.+++
T Consensus       209 ~~~~~~~~~~~~~~~----------------------~~--------------------------~~~~~~~~~~~~~li  240 (262)
T cd00192         209 PGLSNEEVLEYLRKG----------------------YR--------------------------LPKPEYCPDELYELM  240 (262)
T ss_pred             CCCCHHHHHHHHHcC----------------------CC--------------------------CCCCccCChHHHHHH
Confidence            877554443322210                      00                          011234567899999


Q ss_pred             HhccccCCCCCCCHHHHhcC
Q 013973          404 QGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~h  423 (433)
                      .+||+.||++|||+.|+++|
T Consensus       241 ~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         241 LSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             HHHccCCcccCcCHHHHHHh
Confidence            99999999999999999875

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=1.3e-39  Score=311.39  Aligned_cols=256  Identities=24%  Similarity=0.394  Sum_probs=194.5

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ++|++.+.||+|+||.||+|.+..+++.||||.++...  ........|+.++.+.    .+|++++++++++.....+|
T Consensus        15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~----~~~~~i~~~~~~~~~~~~~~   90 (296)
T cd06618          15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKS----HDCPYIVKCYGYFITDSDVF   90 (296)
T ss_pred             chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhc----cCCCchHhhheeeecCCeEE
Confidence            56999999999999999999999999999999987432  2233344555555443    25789999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +||||++++|.+++.... ..+++..+..++.||+.||.|||+ .||+||||||+||++++++                 
T Consensus        91 ~v~e~~~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~-----------------  152 (296)
T cd06618          91 ICMELMSTCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASG-----------------  152 (296)
T ss_pred             EEeeccCcCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCC-----------------
Confidence            999999888888776543 379999999999999999999997 5999999999999995544                 


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCC----CCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                                .+||+|||.+.......  ....|+..|+|||++.+..    ++.++|+||||+++|+|++|..||....
T Consensus       153 ----------~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~  222 (296)
T cd06618         153 ----------NVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCK  222 (296)
T ss_pred             ----------CEEECccccchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcch
Confidence                      45566666554322111  1235788999999997654    7889999999999999999999997533


Q ss_pred             hH-HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          328 NL-EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       328 ~~-~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      .. +.+..   ....                   ....++.                        ...++.++.+||.+|
T Consensus       223 ~~~~~~~~---~~~~-------------------~~~~~~~------------------------~~~~~~~l~~li~~~  256 (296)
T cd06618         223 TEFEVLTK---ILQE-------------------EPPSLPP------------------------NEGFSPDFCSFVDLC  256 (296)
T ss_pred             hHHHHHHH---HhcC-------------------CCCCCCC------------------------CCCCCHHHHHHHHHH
Confidence            21 11111   1100                   0000000                        013466899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      |+.||++||++.++++||||....
T Consensus       257 l~~~p~~Rp~~~~il~~~~~~~~~  280 (296)
T cd06618         257 LTKDHRKRPKYRELLQHPFIRRYE  280 (296)
T ss_pred             ccCChhhCCCHHHHhcChhhhccc
Confidence            999999999999999999998654

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=2.1e-39  Score=311.58  Aligned_cols=249  Identities=20%  Similarity=0.323  Sum_probs=191.1

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECC-------CCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecce
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRE-------RKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  166 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~-------~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~  166 (433)
                      .++|.+.+.||+|+||.||+|.+..       +...+|+|+++..  ......+..|+.+++.+.    .|++++++++.
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~----~h~~i~~~~~~   92 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG----KHKNIINLLGA   92 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhc----CCCCEeeEEEE
Confidence            4679999999999999999998643       2356999998743  223345667888888773    35789999999


Q ss_pred             eecCCeEEEEEecC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceE
Q 013973          167 FDYRNHICIVFEKL-GSSLYDFLRKNNY--------------RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVL  231 (433)
Q Consensus       167 ~~~~~~~~lV~e~~-~~~L~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NIL  231 (433)
                      +...+..|+||||+ +++|.+++.....              ..+++..++.++.|++.||+|||++||+||||||+|||
T Consensus        93 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nil  172 (307)
T cd05098          93 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL  172 (307)
T ss_pred             EecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheE
Confidence            99999999999999 8899999976421              25889999999999999999999999999999999999


Q ss_pred             eeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchh
Q 013973          232 LVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDI  306 (433)
Q Consensus       232 l~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Dv  306 (433)
                      ++.++.                           ++|+|||.+.......     ....++..|+|||++.+..++.++|+
T Consensus       173 l~~~~~---------------------------~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv  225 (307)
T cd05098         173 VTEDNV---------------------------MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV  225 (307)
T ss_pred             EcCCCc---------------------------EEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHH
Confidence            965554                           5555555443222110     11124568999999999889999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHH
Q 013973          307 WSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ  385 (433)
Q Consensus       307 wSlGv~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (433)
                      |||||++|||++ |..||.+....+....+..                       +.                       
T Consensus       226 wslG~~l~el~~~g~~p~~~~~~~~~~~~~~~-----------------------~~-----------------------  259 (307)
T cd05098         226 WSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE-----------------------GH-----------------------  259 (307)
T ss_pred             HHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHc-----------------------CC-----------------------
Confidence            999999999998 8899976554433322111                       00                       


Q ss_pred             HHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          386 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       386 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                        ....+...+.++.+|+.+||+.+|++|||+.+++++
T Consensus       260 --~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         260 --RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             --CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence              001122456789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=3.8e-39  Score=302.12  Aligned_cols=245  Identities=25%  Similarity=0.372  Sum_probs=192.2

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      .++|++.++||+|+||.||+|.+.. +..+|+|.+.......+.+..|+.+++.+     +|++++++.+.+.. ...++
T Consensus         5 ~~~~~~~~~lg~g~~~~vy~~~~~~-~~~~~iK~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~-~~~~~   77 (260)
T cd05073           5 RESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPGSMSVEAFLAEANVMKTL-----QHDKLVKLHAVVTK-EPIYI   77 (260)
T ss_pred             ccceeEEeEecCccceEEEEEEecC-CccEEEEecCCChhHHHHHHHHHHHHHhc-----CCCCcceEEEEEcC-CCeEE
Confidence            4679999999999999999998654 45699998876555556778899999888     66889999988877 78899


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      ||||+ +++|.+++.+.....+++..+..++.|++.||.|||+.|++|+||||+||+++.++.+                
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~----------------  141 (260)
T cd05073          78 ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVC----------------  141 (260)
T ss_pred             EEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcE----------------
Confidence            99999 8899999987655678999999999999999999999999999999999999655554                


Q ss_pred             ccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  329 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~  329 (433)
                                 ||+|||.+.......    ....++..|+|||++....++.++|+|||||++|++++ |..||.+.+..
T Consensus       142 -----------~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~  210 (260)
T cd05073         142 -----------KIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP  210 (260)
T ss_pred             -----------EECCCcceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH
Confidence                       455555443222111    11235677999999998889999999999999999999 99999876554


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +....+....                        .                        .......+.++.+++.+||+.
T Consensus       211 ~~~~~~~~~~------------------------~------------------------~~~~~~~~~~~~~~i~~~l~~  242 (260)
T cd05073         211 EVIRALERGY------------------------R------------------------MPRPENCPEELYNIMMRCWKN  242 (260)
T ss_pred             HHHHHHhCCC------------------------C------------------------CCCcccCCHHHHHHHHHHccc
Confidence            4332211100                        0                        001124566899999999999


Q ss_pred             CCCCCCCHHHHhc
Q 013973          410 DPTDRLTAREALR  422 (433)
Q Consensus       410 dP~~R~ta~ell~  422 (433)
                      ||++||++.+++.
T Consensus       243 ~p~~Rp~~~~l~~  255 (260)
T cd05073         243 RPEERPTFEYIQS  255 (260)
T ss_pred             CcccCcCHHHHHH
Confidence            9999999998864

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=100.00  E-value=5.3e-40  Score=303.88  Aligned_cols=228  Identities=25%  Similarity=0.379  Sum_probs=180.7

Q ss_pred             cccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecC-CCCHHH
Q 013973          108 GTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYD  186 (433)
Q Consensus       108 G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~-~~~L~~  186 (433)
                      |.+|.||+|+++.+++.||+|.++.....    ..|...+...     .|++++++++.+.....+++||||+ |++|.+
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~~----~~~~~~~~~~-----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   74 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSSEY----SRERLTIIPH-----CVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWS   74 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchhhh----hhHHHHHHhc-----CCCceeehhhheecCCeEEEEEecCCCCCHHH
Confidence            89999999999999999999998754321    2233222222     5689999999999999999999999 899999


Q ss_pred             HHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEE
Q 013973          187 FLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK  266 (433)
Q Consensus       187 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~k  266 (433)
                      ++....  .+++..+..++.|++.||.|||++||+||||||+||+++.                           ++.++
T Consensus        75 ~l~~~~--~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~---------------------------~~~~~  125 (237)
T cd05576          75 HISKFL--NIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDD---------------------------RGHIQ  125 (237)
T ss_pred             HHHHhc--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC---------------------------CCCEE
Confidence            997654  6999999999999999999999999999999999999954                           44567


Q ss_pred             EEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Q 013973          267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHM  346 (433)
Q Consensus       267 l~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~  346 (433)
                      ++|||.+...........++..|+|||.+.+..++.++|+||+|+++|||++|..||........               
T Consensus       126 l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~---------------  190 (237)
T cd05576         126 LTYFSRWSEVEDSCDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGIN---------------  190 (237)
T ss_pred             EecccchhccccccccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc---------------
Confidence            77777655443333334567789999999888899999999999999999999988753211000               


Q ss_pred             HHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCH-----HHHh
Q 013973          347 LKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA-----REAL  421 (433)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta-----~ell  421 (433)
                                  ....                          ...++.++..+++||.+||+.||++|+++     +|++
T Consensus       191 ------------~~~~--------------------------~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~  232 (237)
T cd05576         191 ------------THTT--------------------------LNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIK  232 (237)
T ss_pred             ------------cccc--------------------------cCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHH
Confidence                        0000                          01123456789999999999999999986     9999


Q ss_pred             cCCCC
Q 013973          422 RHPFF  426 (433)
Q Consensus       422 ~hp~f  426 (433)
                      .||||
T Consensus       233 ~h~~~  237 (237)
T cd05576         233 SHPFF  237 (237)
T ss_pred             cCCCC
Confidence            99998

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.6e-39  Score=306.42  Aligned_cols=245  Identities=20%  Similarity=0.276  Sum_probs=187.7

Q ss_pred             EEEEeeeeccccEEEEEEEECCC---CeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC-
Q 013973           99 YKIHSKMGEGTFGQVLECWDRER---KEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN-  171 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~---~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~-  171 (433)
                      |++.+.||+|+||.||+|....+   +..||+|.++..   ......+..|+..++.+     .|++++++++.+.... 
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~   75 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDF-----DHPNVMKLIGVCFEASS   75 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhC-----CCCCeeeEEeeeccCCc
Confidence            56789999999999999987653   478999998643   22345677888888887     6788999998775544 


Q ss_pred             -----eEEEEEecC-CCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccC
Q 013973          172 -----HICIVFEKL-GSSLYDFLRKNN----YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVP  241 (433)
Q Consensus       172 -----~~~lV~e~~-~~~L~~~l~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~  241 (433)
                           ..++||||+ +++|.+++....    ...+++..+..++.|++.||.|||+.||+||||||+||++++++.    
T Consensus        76 ~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~----  151 (273)
T cd05035          76 LQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMT----  151 (273)
T ss_pred             cccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCe----
Confidence                 389999999 899999985432    236899999999999999999999999999999999999965544    


Q ss_pred             CCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHH
Q 013973          242 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL  316 (433)
Q Consensus       242 dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el  316 (433)
                                             +||+|||.++......     ....++..|+|||++.+..++.++|||||||++|||
T Consensus       152 -----------------------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el  208 (273)
T cd05035         152 -----------------------VCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEI  208 (273)
T ss_pred             -----------------------EEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHH
Confidence                                   5555555544322111     112346789999999888899999999999999999


Q ss_pred             Hh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCc
Q 013973          317 CT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS  395 (433)
Q Consensus       317 lt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (433)
                      ++ |..||.+.+..+....+...                      ...                          ..+..+
T Consensus       209 ~~~g~~p~~~~~~~~~~~~~~~~----------------------~~~--------------------------~~~~~~  240 (273)
T cd05035         209 ATRGQTPYPGVENHEIYDYLRHG----------------------NRL--------------------------KQPEDC  240 (273)
T ss_pred             HhCCCCCCCCCCHHHHHHHHHcC----------------------CCC--------------------------CCCcCC
Confidence            99 89999876654433222110                      000                          012345


Q ss_pred             hhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          396 AGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       396 ~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                      +.++.+++.+||+.||++|||+.|++++
T Consensus       241 ~~~~~~li~~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         241 LDELYDLMYSCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            6789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=2.3e-39  Score=303.16  Aligned_cols=236  Identities=23%  Similarity=0.355  Sum_probs=183.1

Q ss_pred             eeeccccEEEEEEEE--CCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEe
Q 013973          104 KMGEGTFGQVLECWD--RERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  178 (433)
Q Consensus       104 ~iG~G~~g~V~~~~~--~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e  178 (433)
                      +||+|+||.||+|.+  ..+++.+|+|+++...   ...+.+..|+.+++.+     .|++++++++++. ....++|||
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~-~~~~~lv~e   75 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQL-----DNPYIVRMIGICE-AESWMLVME   75 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhC-----CCCCcceEEEEEc-CCCcEEEEe
Confidence            689999999999964  4677899999986432   2345667788888887     6788999998875 456789999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccc
Q 013973          179 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK  257 (433)
Q Consensus       179 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~  257 (433)
                      |+ +++|.+++....  .+++..+..++.|++.||+|||++||+||||||+|||++.++.+                   
T Consensus        76 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~-------------------  134 (257)
T cd05116          76 LAELGPLNKFLQKNK--HVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYA-------------------  134 (257)
T ss_pred             cCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeE-------------------
Confidence            99 789999997654  68999999999999999999999999999999999999655554                   


Q ss_pred             cCCCCCCEEEEecCCccccCCCC------CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChHH
Q 013973          258 RMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  330 (433)
Q Consensus       258 ~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~  330 (433)
                              ||+|||.+.......      ....++..|+|||.+....++.++|+|||||++|||++ |..||...+..+
T Consensus       135 --------kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~  206 (257)
T cd05116         135 --------KISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE  206 (257)
T ss_pred             --------EECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence                    445555443322111      11134678999999988889999999999999999998 999998766554


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+...                      ...                          ..+...+.++.+||.+||+.|
T Consensus       207 ~~~~i~~~----------------------~~~--------------------------~~~~~~~~~l~~li~~~~~~~  238 (257)
T cd05116         207 VTQMIESG----------------------ERM--------------------------ECPQRCPPEMYDLMKLCWTYG  238 (257)
T ss_pred             HHHHHHCC----------------------CCC--------------------------CCCCCCCHHHHHHHHHHhccC
Confidence            43332210                      000                          112356778999999999999


Q ss_pred             CCCCCCHHHHhc
Q 013973          411 PTDRLTAREALR  422 (433)
Q Consensus       411 P~~R~ta~ell~  422 (433)
                      |++||++++|.+
T Consensus       239 p~~Rp~~~~i~~  250 (257)
T cd05116         239 VDERPGFAVVEL  250 (257)
T ss_pred             chhCcCHHHHHH
Confidence            999999998864

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=100.00  E-value=1.3e-39  Score=305.17  Aligned_cols=248  Identities=29%  Similarity=0.469  Sum_probs=194.7

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc------hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI------KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      +|.+.++||+|+||.||++.+..++..+++|+++..      .........|+.+++.+     +|+|++++++.+....
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~   75 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKL-----DHPAIVKFHASFLERD   75 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhC-----CCCcHHHHHHHHhcCC
Confidence            589999999999999999999888777777776531      11223445677777776     6789999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      ..++||||+ +++|.+++...  ....+++..+..++.|++.||.|||+.||+|+||||+||++++ +            
T Consensus        76 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~------------  142 (260)
T cd08222          76 AFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-N------------  142 (260)
T ss_pred             ceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-C------------
Confidence            999999999 88999988642  2346999999999999999999999999999999999999943 2            


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  325 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~  325 (433)
                                     .++|+|||.+.......   ....|+..|+|||.+.+..++.++|+||||+++|+|++|..||..
T Consensus       143 ---------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~  207 (260)
T cd08222         143 ---------------LLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEG  207 (260)
T ss_pred             ---------------CEeecccCceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence                           36666666654332211   224578899999999888899999999999999999999999976


Q ss_pred             CChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHh
Q 013973          326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  405 (433)
Q Consensus       326 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  405 (433)
                      .........+..  +..+                                              ..+...+.++.++|.+
T Consensus       208 ~~~~~~~~~~~~--~~~~----------------------------------------------~~~~~~~~~~~~li~~  239 (260)
T cd08222         208 QNFLSVVLRIVE--GPTP----------------------------------------------SLPETYSRQLNSIMQS  239 (260)
T ss_pred             ccHHHHHHHHHc--CCCC----------------------------------------------CCcchhcHHHHHHHHH
Confidence            554333222111  1110                                              0112456688999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCC
Q 013973          406 LLRYDPTDRLTAREALRHPFF  426 (433)
Q Consensus       406 ~L~~dP~~R~ta~ell~hp~f  426 (433)
                      ||+.||++||++.|+++||||
T Consensus       240 ~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         240 MLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             HhcCChhhCcCHHHHhhCCCC
Confidence            999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=2.6e-39  Score=302.21  Aligned_cols=245  Identities=26%  Similarity=0.381  Sum_probs=193.1

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  176 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV  176 (433)
                      .+|++.+.||+|+||.||+|.+.. +..+|+|++.........+..|+++++++     .|++++++++.+......++|
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~-~~~~~~k~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~~v   77 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLE-KRKVAIKTIREGAMSEEDFIEEAQVMMKL-----SHPKLVQLYGVCTERSPICLV   77 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeC-CCeEEEEECCCCCCCHHHHHHHHHHHHhC-----CCCCeeeEEEEEccCCceEEE
Confidence            468999999999999999998754 56799999875444455678899999988     668899999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          177 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       177 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      |||+ +++|.+++.... ..+++..+..++.|++.||+|||+.+|+|+||||+||+++.++.                  
T Consensus        78 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~------------------  138 (256)
T cd05112          78 FEFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQV------------------  138 (256)
T ss_pred             EEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCe------------------
Confidence            9999 889999987643 36899999999999999999999999999999999999965554                  


Q ss_pred             cccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChHH
Q 013973          256 FKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  330 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~  330 (433)
                               ++|+|||.+.......    ....++..|+|||++.+..++.++|+||||+++|||++ |..||......+
T Consensus       139 ---------~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~  209 (256)
T cd05112         139 ---------VKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE  209 (256)
T ss_pred             ---------EEECCCcceeecccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH
Confidence                     5555555443221111    11234678999999998889999999999999999998 999998765544


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+..                       +...                         ..+...+..+.+|+.+||+.+
T Consensus       210 ~~~~~~~-----------------------~~~~-------------------------~~~~~~~~~~~~l~~~~l~~~  241 (256)
T cd05112         210 VVETINA-----------------------GFRL-------------------------YKPRLASQSVYELMQHCWKER  241 (256)
T ss_pred             HHHHHhC-----------------------CCCC-------------------------CCCCCCCHHHHHHHHHHcccC
Confidence            3332211                       0000                         001234568999999999999


Q ss_pred             CCCCCCHHHHhcC
Q 013973          411 PTDRLTAREALRH  423 (433)
Q Consensus       411 P~~R~ta~ell~h  423 (433)
                      |++|||+.|++++
T Consensus       242 p~~Rp~~~~~l~~  254 (256)
T cd05112         242 PEDRPSFSLLLHQ  254 (256)
T ss_pred             hhhCCCHHHHHHh
Confidence            9999999999874

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.4e-39  Score=301.13  Aligned_cols=239  Identities=31%  Similarity=0.538  Sum_probs=196.7

Q ss_pred             eeccccEEEEEEEECCCCeEEEEEEeecchh----hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecC
Q 013973          105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  180 (433)
Q Consensus       105 iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~  180 (433)
                      ||+|+||.||++.+..+++.||+|+++....    ....+..|+.+++.+     .|++++++++.++.+...|+||||+
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~~v~e~~   75 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRI-----NHPFIVKLHYAFQTEEKLYLVLEYA   75 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHc-----CCCcHHHHHHHeecCCeeEEEEecC
Confidence            6999999999999998899999999874322    334667788888888     5788999999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccC
Q 013973          181 -GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM  259 (433)
Q Consensus       181 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~  259 (433)
                       +++|.+++....  .+++..+..++.|++.||.|||+.+++|+||||+||+++.                         
T Consensus        76 ~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~-------------------------  128 (250)
T cd05123          76 PGGELFSHLSKEG--RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDA-------------------------  128 (250)
T ss_pred             CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcC-------------------------
Confidence             999999998764  6899999999999999999999999999999999999954                         


Q ss_pred             CCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 013973          260 PKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME  336 (433)
Q Consensus       260 ~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~i~  336 (433)
                        ++.++|+|||.+......   .....|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+..+....+.
T Consensus       129 --~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~  206 (250)
T cd05123         129 --DGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKIL  206 (250)
T ss_pred             --CCcEEEeecCcceecccCCCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHh
Confidence              445777777766544332   233468889999999998888999999999999999999999997665433222211


Q ss_pred             HHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCC
Q 013973          337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  416 (433)
Q Consensus       337 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t  416 (433)
                      .                       ..+.                          .+...+.++.++|.+||..||++||+
T Consensus       207 ~-----------------------~~~~--------------------------~~~~~~~~l~~~i~~~l~~~p~~R~~  237 (250)
T cd05123         207 K-----------------------DPLR--------------------------FPEFLSPEARDLISGLLQKDPTKRLG  237 (250)
T ss_pred             c-----------------------CCCC--------------------------CCCCCCHHHHHHHHHHhcCCHhhCCC
Confidence            1                       1111                          12244678899999999999999999


Q ss_pred             H---HHHhcCCCC
Q 013973          417 A---REALRHPFF  426 (433)
Q Consensus       417 a---~ell~hp~f  426 (433)
                      +   .++++||||
T Consensus       238 ~~~~~~l~~~~~f  250 (250)
T cd05123         238 SGGAEEIKAHPFF  250 (250)
T ss_pred             cccHHHHHhCCCC
Confidence            9   999999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=1.9e-39  Score=316.85  Aligned_cols=249  Identities=22%  Similarity=0.339  Sum_probs=188.5

Q ss_pred             CcEEEEeeeeccccEEEEEEEE-----CCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           97 SRYKIHSKMGEGTFGQVLECWD-----RERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~-----~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      ++|++.+.||+|+||.||+|.+     ..+++.||||+++..  ......+..|+.++.++.    +|+||+++++.+..
T Consensus         7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----~h~niv~~~~~~~~   82 (343)
T cd05103           7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG----HHLNVVNLLGACTK   82 (343)
T ss_pred             hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhcc----CCccHhhhcceeec
Confidence            5799999999999999999984     356788999999742  223445678999988884    45789999987754


Q ss_pred             -CCeEEEEEecC-CCCHHHHHHhcCC------------------------------------------------------
Q 013973          170 -RNHICIVFEKL-GSSLYDFLRKNNY------------------------------------------------------  193 (433)
Q Consensus       170 -~~~~~lV~e~~-~~~L~~~l~~~~~------------------------------------------------------  193 (433)
                       ...+++||||+ +|+|.+++.....                                                      
T Consensus        83 ~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (343)
T cd05103          83 PGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVE  162 (343)
T ss_pred             CCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccch
Confidence             45789999999 9999999875321                                                      


Q ss_pred             -----------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccCCCC
Q 013973          194 -----------RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS  262 (433)
Q Consensus       194 -----------~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~  262 (433)
                                 ..+++..+..++.||+.||+|||++||+||||||+|||++.                           +
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~---------------------------~  215 (343)
T cd05103         163 EEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE---------------------------N  215 (343)
T ss_pred             hhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcC---------------------------C
Confidence                       23678888999999999999999999999999999999954                           4


Q ss_pred             CCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 013973          263 SAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME  336 (433)
Q Consensus       263 ~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~~~~~i~  336 (433)
                      +.+||+|||++.......     ....++..|+|||++.+..++.++||||||+++|+|++ |..||............ 
T Consensus       216 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~-  294 (343)
T cd05103         216 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR-  294 (343)
T ss_pred             CcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHH-
Confidence            456666666655332111     11235677999999999899999999999999999997 99999764432211110 


Q ss_pred             HHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCC
Q 013973          337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  416 (433)
Q Consensus       337 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t  416 (433)
                                           +..+..                         ...+...++++.+++..||+.||++|||
T Consensus       295 ---------------------~~~~~~-------------------------~~~~~~~~~~~~~~~~~cl~~~p~~Rps  328 (343)
T cd05103         295 ---------------------LKEGTR-------------------------MRAPDYTTPEMYQTMLDCWHGEPSQRPT  328 (343)
T ss_pred             ---------------------HhccCC-------------------------CCCCCCCCHHHHHHHHHHccCChhhCcC
Confidence                                 000000                         0001234567899999999999999999


Q ss_pred             HHHHhcC
Q 013973          417 AREALRH  423 (433)
Q Consensus       417 a~ell~h  423 (433)
                      +.|+++|
T Consensus       329 ~~eil~~  335 (343)
T cd05103         329 FSELVEH  335 (343)
T ss_pred             HHHHHHH
Confidence            9999986

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-40  Score=300.16  Aligned_cols=288  Identities=27%  Similarity=0.457  Sum_probs=230.1

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeec---chhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC--
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR--  170 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~--  170 (433)
                      ..+|.-++.+|.|.- .|..|.+...++.||+|.+..   .....++..+|..++..+     .|+|++.++.+|...  
T Consensus        16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v-----~~~nii~l~n~ftP~~~   89 (369)
T KOG0665|consen   16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCV-----NHKNIISLLNVFTPQKT   89 (369)
T ss_pred             eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhh-----cccceeeeeeccCcccc
Confidence            457899999999999 788899999999999998742   233445667899999888     778999999998643  


Q ss_pred             ----CeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCC
Q 013973          171 ----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  246 (433)
Q Consensus       171 ----~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~  246 (433)
                          ..+|+|||+|..+|.+.+..    .++-+.+..++.|++.|++|||+.||+||||||+||+++.++          
T Consensus        90 l~~~~e~y~v~e~m~~nl~~vi~~----elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~----------  155 (369)
T KOG0665|consen   90 LEEFQEVYLVMELMDANLCQVILM----ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDC----------  155 (369)
T ss_pred             HHHHHhHHHHHHhhhhHHHHHHHH----hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchh----------
Confidence                46899999999999999873    478888999999999999999999999999999999996554          


Q ss_pred             CCCCCCCcccccCCCCCCEEEEecCCccccCCC--CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 013973          247 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                                       .+||.|||+|+.....  .+-++.|..|.|||++.+..|...+||||+||++.||++|...|.
T Consensus       156 -----------------~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~  218 (369)
T KOG0665|consen  156 -----------------TLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFP  218 (369)
T ss_pred             -----------------heeeccchhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEec
Confidence                             5666666666544433  123578999999999999999999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHH
Q 013973          325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  404 (433)
Q Consensus       325 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  404 (433)
                      +.+..+++.++.+.+|.+.+...++....+..|++.-.-. ..     -++...++...+.. ..+.....+..++||+.
T Consensus       219 g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y-~~-----~~f~~~fpD~~f~~-~~e~~~~~~~~ardll~  291 (369)
T KOG0665|consen  219 GKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQY-QA-----ISFSELFPDSLFPV-VLEGSKLDCSLARDLLS  291 (369)
T ss_pred             CchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHh-hc-----cchhhhCCcccccc-cccCCccchHHHHHHHH
Confidence            9999999999999999999999999999998888732110 00     01111111111110 11122234567899999


Q ss_pred             hccccCCCCCCCHHHHhcCCCCC
Q 013973          405 GLLRYDPTDRLTAREALRHPFFT  427 (433)
Q Consensus       405 ~~L~~dP~~R~ta~ell~hp~f~  427 (433)
                      +||..||++|.+++++|+||||+
T Consensus       292 ~MLvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  292 KMLVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             HhhccChhhcccHHHHhcCCeee
Confidence            99999999999999999999996

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=1.8e-39  Score=303.26  Aligned_cols=242  Identities=21%  Similarity=0.315  Sum_probs=190.9

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  176 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV  176 (433)
                      ++|++.+.||+|+||.||++.  .+++.||+|+++.. .....+..|+.++..+     .|++++++++.+... ..++|
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~-~~~~~~~~e~~~l~~~-----~~~~i~~~~~~~~~~-~~~~v   76 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCD-VTAQAFLEETAVMTKL-----HHKNLVRLLGVILHN-GLYIV   76 (254)
T ss_pred             HHceeeeeeccCCCCceEecc--cCCCceEEEeecCc-chHHHHHHHHHHHHhC-----CCCCcCeEEEEEcCC-CcEEE
Confidence            469999999999999999985  46778999998743 2345677888888887     668899999988654 47999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          177 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       177 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      |||+ +++|.+++.......+++..+..++.|++.||.|||+.|++||||||+|||++.+                    
T Consensus        77 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~--------------------  136 (254)
T cd05083          77 MELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSED--------------------  136 (254)
T ss_pred             EECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCC--------------------
Confidence            9999 8999999987665578999999999999999999999999999999999999544                    


Q ss_pred             cccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 013973          256 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAM  334 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~~~~~  334 (433)
                             +.++|+|||.+............+..|+|||.+.+..++.++|+|||||++|+|++ |+.||...+..+....
T Consensus       137 -------~~~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~  209 (254)
T cd05083         137 -------GVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKEC  209 (254)
T ss_pred             -------CcEEECCCccceeccccCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHH
Confidence                   45666666665543322222334567999999998889999999999999999998 9999987655443222


Q ss_pred             HHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCC
Q 013973          335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  414 (433)
Q Consensus       335 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  414 (433)
                      +.+                       +..                         ...+...+..+.+|+.+||+.+|++|
T Consensus       210 ~~~-----------------------~~~-------------------------~~~~~~~~~~~~~li~~~l~~~p~~R  241 (254)
T cd05083         210 VEK-----------------------GYR-------------------------MEPPEGCPADVYVLMTSCWETEPKKR  241 (254)
T ss_pred             HhC-----------------------CCC-------------------------CCCCCcCCHHHHHHHHHHcCCChhhC
Confidence            111                       000                         00112456788999999999999999


Q ss_pred             CCHHHHhc
Q 013973          415 LTAREALR  422 (433)
Q Consensus       415 ~ta~ell~  422 (433)
                      |+++++++
T Consensus       242 p~~~~l~~  249 (254)
T cd05083         242 PSFHKLRE  249 (254)
T ss_pred             cCHHHHHH
Confidence            99999875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.8e-39  Score=301.57  Aligned_cols=237  Identities=24%  Similarity=0.355  Sum_probs=185.2

Q ss_pred             eeeeccccEEEEEEEECCCC---eEEEEEEeecchh--hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEE
Q 013973          103 SKMGEGTFGQVLECWDRERK---EMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  177 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~---~~vAiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~  177 (433)
                      ++||+|+||.||+|....++   ..||+|.+.....  ..+.+..|+.+++.+     .|++++++++++. ...+++||
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~-~~~~~~v~   74 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQL-----DHPCIVRLIGVCK-GEPLMLVM   74 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhc-----CCCCeeeEEEEEc-CCceEEEE
Confidence            47999999999999876655   7899999874433  455677888888887     6688999998776 45689999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCccc
Q 013973          178 EKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  256 (433)
Q Consensus       178 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~  256 (433)
                      ||+ +++|.+++....  .+++..+..++.|++.||+|||..+|+|+||||+|||++.++.++++|||            
T Consensus        75 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~------------  140 (257)
T cd05060          75 ELAPLGPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFG------------  140 (257)
T ss_pred             EeCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEecccc------------
Confidence            999 889999998764  78999999999999999999999999999999999999665555555554            


Q ss_pred             ccCCCCCCEEEEecCCccccCCCCCc------eeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChH
Q 013973          257 KRMPKSSAIKVIDFGSTTYERPDQNY------IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  329 (433)
Q Consensus       257 ~~~~~~~~~kl~Dfg~a~~~~~~~~~------~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~  329 (433)
                                     .+.........      ..++..|+|||.+.+..++.++||||||+++|+|++ |..||...+..
T Consensus       141 ---------------~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~  205 (257)
T cd05060         141 ---------------MSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA  205 (257)
T ss_pred             ---------------ccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH
Confidence                           44322211111      123567999999998899999999999999999998 99999876554


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +....+....                      ..                          ..+...+..+.++|.+||+.
T Consensus       206 ~~~~~~~~~~----------------------~~--------------------------~~~~~~~~~l~~li~~cl~~  237 (257)
T cd05060         206 EVIAMLESGE----------------------RL--------------------------PRPEECPQEIYSIMLSCWKY  237 (257)
T ss_pred             HHHHHHHcCC----------------------cC--------------------------CCCCCCCHHHHHHHHHHhcC
Confidence            4333221100                      00                          11234567899999999999


Q ss_pred             CCCCCCCHHHHhc
Q 013973          410 DPTDRLTAREALR  422 (433)
Q Consensus       410 dP~~R~ta~ell~  422 (433)
                      ||++||++.++++
T Consensus       238 ~p~~Rp~~~~l~~  250 (257)
T cd05060         238 RPEDRPTFSELES  250 (257)
T ss_pred             ChhhCcCHHHHHH
Confidence            9999999999875

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.8e-39  Score=310.15  Aligned_cols=253  Identities=23%  Similarity=0.337  Sum_probs=191.8

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCC--------------CeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCce
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRER--------------KEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRC  160 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~--------------~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i  160 (433)
                      ++|++.+.||+|+||.||+|.+..+              ...||+|.++..  ......+..|+++++++     .|+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l-----~h~~i   79 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRL-----KNPNI   79 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhC-----CCCCc
Confidence            5799999999999999999987543              235999998642  23345677899999988     66889


Q ss_pred             EEecceeecCCeEEEEEecC-CCCHHHHHHhcCC----------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCc
Q 013973          161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNY----------RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPEN  229 (433)
Q Consensus       161 ~~~~~~~~~~~~~~lV~e~~-~~~L~~~l~~~~~----------~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~N  229 (433)
                      +++++++...+..++||||+ +++|.+++.....          ..+++..+..++.|++.||.|||++||+||||||+|
T Consensus        80 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~N  159 (295)
T cd05097          80 IRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRN  159 (295)
T ss_pred             CeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhh
Confidence            99999999999999999999 8999999865321          246888999999999999999999999999999999


Q ss_pred             eEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcc
Q 013973          230 VLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPC  304 (433)
Q Consensus       230 ILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~  304 (433)
                      ||+++++.                           +||+|||++.......     ....++..|+|||++.+..++.++
T Consensus       160 ill~~~~~---------------------------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  212 (295)
T cd05097         160 CLVGNHYT---------------------------IKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTAS  212 (295)
T ss_pred             EEEcCCCc---------------------------EEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchh
Confidence            99965554                           4555555443221111     112456789999999988899999


Q ss_pred             hhHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccch
Q 013973          305 DIWSVGCILVELCT--GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP  382 (433)
Q Consensus       305 DvwSlGv~l~ellt--g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  382 (433)
                      |+|||||++|+|++  |..||...+..+....+......                  .+...+                 
T Consensus       213 DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~------------------~~~~~~-----------------  257 (295)
T cd05097         213 DVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRN------------------QGRQIY-----------------  257 (295)
T ss_pred             hHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhh------------------cccccc-----------------
Confidence            99999999999988  67888876655443332221100                  000000                 


Q ss_pred             hHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhc
Q 013973          383 RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       383 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                            ...+...+..+.+|+.+||+.||++||++.++++
T Consensus       258 ------~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         258 ------LSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             ------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence                  0112245678999999999999999999999965

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=4e-39  Score=303.17  Aligned_cols=251  Identities=21%  Similarity=0.288  Sum_probs=191.8

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCe---EEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKE---MVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~---~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      ++|...+.||+|+||.||+|.+..+++   .+|+|.++..  ......+..|+.+++.+     .|++++++.+++...+
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~   79 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQF-----SHHNIIRLEGVVTKFK   79 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcC-----CCCCeeEEEEEEccCC
Confidence            568999999999999999999876554   7999988643  23345667788888777     5688999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      ..++||||+ +++|.+++.... ..+++..+..++.|++.||+|||+.||+||||||+||+++.++.++++|||++....
T Consensus        80 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~  158 (268)
T cd05063          80 PAMIITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLE  158 (268)
T ss_pred             CcEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecc
Confidence            999999999 889999987643 468999999999999999999999999999999999999665555555555433221


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChH
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  329 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~  329 (433)
                      .....          ..           .......+..|+|||++.+..++.++|||||||++|||++ |..||...+..
T Consensus       159 ~~~~~----------~~-----------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~  217 (268)
T cd05063         159 DDPEG----------TY-----------TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH  217 (268)
T ss_pred             ccccc----------ce-----------eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH
Confidence            10000          00           0000123457999999998889999999999999999998 99999876655


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +....+.... ..                       |                        .....+.++.+|+.+||+.
T Consensus       218 ~~~~~i~~~~-~~-----------------------~------------------------~~~~~~~~~~~li~~c~~~  249 (268)
T cd05063         218 EVMKAINDGF-RL-----------------------P------------------------APMDCPSAVYQLMLQCWQQ  249 (268)
T ss_pred             HHHHHHhcCC-CC-----------------------C------------------------CCCCCCHHHHHHHHHHcCC
Confidence            4444332110 00                       0                        0123456789999999999


Q ss_pred             CCCCCCCHHHHhc
Q 013973          410 DPTDRLTAREALR  422 (433)
Q Consensus       410 dP~~R~ta~ell~  422 (433)
                      ||++||++.++++
T Consensus       250 ~p~~Rp~~~~i~~  262 (268)
T cd05063         250 DRARRPRFVDIVN  262 (268)
T ss_pred             CcccCcCHHHHHH
Confidence            9999999999975

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=2.3e-39  Score=305.31  Aligned_cols=244  Identities=18%  Similarity=0.275  Sum_probs=184.8

Q ss_pred             EEEeeeeccccEEEEEEEECCCCe--EEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec-----
Q 013973          100 KIHSKMGEGTFGQVLECWDRERKE--MVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY-----  169 (433)
Q Consensus       100 ~~~~~iG~G~~g~V~~~~~~~~~~--~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~-----  169 (433)
                      .+.+.||+|+||.||+|.+..++.  .||+|.++..   ....+.+..|..+++.+     .|+||+++++.+..     
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~   76 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEF-----DHPNVMRLIGVCLQTVESE   76 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhC-----CCCCcceEEEEEccCCccc
Confidence            467899999999999999887765  5899988642   33445667788888887     67889999886532     


Q ss_pred             -CCeEEEEEecC-CCCHHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCC
Q 013973          170 -RNHICIVFEKL-GSSLYDFLRKN----NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY  243 (433)
Q Consensus       170 -~~~~~lV~e~~-~~~L~~~l~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~df  243 (433)
                       ....++||||+ +++|.+++...    ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+     
T Consensus        77 ~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~-----  151 (272)
T cd05075          77 GYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNV-----  151 (272)
T ss_pred             CCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCE-----
Confidence             23578999999 89999987532    12358999999999999999999999999999999999999655554     


Q ss_pred             cCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh
Q 013973          244 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT  318 (433)
Q Consensus       244 g~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt  318 (433)
                                            +|+|||++.......     ....+++.|+|||++.+..++.++|||||||++|||++
T Consensus       152 ----------------------kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~  209 (272)
T cd05075         152 ----------------------CVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIAT  209 (272)
T ss_pred             ----------------------EECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHc
Confidence                                  455555444322111     11245778999999999899999999999999999999


Q ss_pred             -CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchh
Q 013973          319 -GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG  397 (433)
Q Consensus       319 -g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  397 (433)
                       |..||.+.+..+....+.                       .+..                         ...+..++.
T Consensus       210 ~g~~p~~~~~~~~~~~~~~-----------------------~~~~-------------------------~~~~~~~~~  241 (272)
T cd05075         210 RGQTPYPGVENSEIYDYLR-----------------------QGNR-------------------------LKQPPDCLD  241 (272)
T ss_pred             CCCCCCCCCCHHHHHHHHH-----------------------cCCC-------------------------CCCCCCCCH
Confidence             899998765544332211                       1100                         001124566


Q ss_pred             HHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          398 DLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       398 ~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                      .+.++|.+||+.||++|||+.+++++
T Consensus       242 ~~~~li~~~l~~~p~~Rps~~~l~~~  267 (272)
T cd05075         242 GLYSLMSSCWLLNPKDRPSFETLRCE  267 (272)
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            78999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=1.5e-39  Score=304.94  Aligned_cols=243  Identities=28%  Similarity=0.425  Sum_probs=189.5

Q ss_pred             EEEeeeeccccEEEEEEEEC----CCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973          100 KIHSKMGEGTFGQVLECWDR----ERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus       100 ~~~~~iG~G~~g~V~~~~~~----~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      ++.+.||.|.||.||+|...    ..+..|+||+++..  ....+.+..|+..+.++     .|+||+++++++...+..
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l-----~h~ni~~~~g~~~~~~~~   76 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKL-----RHPNIVKLYGFCIENEPL   76 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTH-----SBTTBE-EEEEEESSSSE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccc-----cccccccccccccccccc
Confidence            57799999999999999987    45678999999642  23457788899999888     668899999999988889


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      ++||||+ +|+|.++|.......+++..+..++.||+.||.|||+++|+|+||+++|||++++                 
T Consensus        77 ~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~-----------------  139 (259)
T PF07714_consen   77 FLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSN-----------------  139 (259)
T ss_dssp             EEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETT-----------------
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-----------------
Confidence            9999999 7899999998744579999999999999999999999999999999999999654                 


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH  326 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~  326 (433)
                                +.+||+|||++.......     ....+...|+|||.+.+..++.++||||||+++|||++ |..||...
T Consensus       140 ----------~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~  209 (259)
T PF07714_consen  140 ----------GQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY  209 (259)
T ss_dssp             ----------TEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS
T ss_pred             ----------cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                      456666666665442111     12346778999999999889999999999999999999 78999877


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      +..+....+....                      .                          ...+..++.++.++|..|
T Consensus       210 ~~~~~~~~~~~~~----------------------~--------------------------~~~~~~~~~~~~~li~~C  241 (259)
T PF07714_consen  210 DNEEIIEKLKQGQ----------------------R--------------------------LPIPDNCPKDIYSLIQQC  241 (259)
T ss_dssp             CHHHHHHHHHTTE----------------------E--------------------------TTSBTTSBHHHHHHHHHH
T ss_pred             ccccccccccccc----------------------c--------------------------ceeccchhHHHHHHHHHH
Confidence            6655443321100                      0                          112235677899999999


Q ss_pred             cccCCCCCCCHHHHhc
Q 013973          407 LRYDPTDRLTAREALR  422 (433)
Q Consensus       407 L~~dP~~R~ta~ell~  422 (433)
                      |..||++|||+.++++
T Consensus       242 ~~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  242 WSHDPEKRPSFQEILQ  257 (259)
T ss_dssp             T-SSGGGS--HHHHHH
T ss_pred             cCCChhhCcCHHHHHh
Confidence            9999999999999975

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=2.8e-39  Score=308.06  Aligned_cols=245  Identities=19%  Similarity=0.329  Sum_probs=190.2

Q ss_pred             cEEEEeeeeccccEEEEEEEECC-----CCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRE-----RKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      +|++.+.||+|+||.||+|.+..     ....+|+|.+....  .....+..|+.+++.+     .|+||+++++.+...
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~   75 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQV-----NHPHVIKLYGACSQD   75 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhC-----CCCCEeeEEEEEecC
Confidence            47899999999999999998753     33679999886432  2345677899998888     678999999999999


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcC----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNN----------------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKP  227 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp  227 (433)
                      +..++||||+ +++|.+++....                      ...+++..+..++.|++.||+|||+.||+||||||
T Consensus        76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp  155 (290)
T cd05045          76 GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAA  155 (290)
T ss_pred             CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhh
Confidence            9999999999 899999987531                      13578999999999999999999999999999999


Q ss_pred             CceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCC
Q 013973          228 ENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTY  302 (433)
Q Consensus       228 ~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~  302 (433)
                      +|||+++++                           .+||+|||++.......     ....++..|+|||++.+..++.
T Consensus       156 ~nill~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~  208 (290)
T cd05045         156 RNVLVAEGR---------------------------KMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTT  208 (290)
T ss_pred             heEEEcCCC---------------------------cEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcch
Confidence            999996544                           45555555554322111     1224567899999999888999


Q ss_pred             cchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccc
Q 013973          303 PCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL  381 (433)
Q Consensus       303 ~~DvwSlGv~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  381 (433)
                      ++||||||+++|||++ |..||.+....+....+..                       + ..+                
T Consensus       209 ~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~-----------------------~-~~~----------------  248 (290)
T cd05045         209 QSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKT-----------------------G-YRM----------------  248 (290)
T ss_pred             HhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhC-----------------------C-CCC----------------
Confidence            9999999999999998 9999987554433322110                       0 000                


Q ss_pred             hhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhc
Q 013973          382 PRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                              ..+...+.++.+|+.+||+.||++||++.|+++
T Consensus       249 --------~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~  281 (290)
T cd05045         249 --------ERPENCSEEMYNLMLTCWKQEPDKRPTFADISK  281 (290)
T ss_pred             --------CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence                    012245678999999999999999999999875

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-41  Score=353.81  Aligned_cols=261  Identities=29%  Similarity=0.419  Sum_probs=206.0

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      .++-+++-...||.|.||.||-|.+..+|+..|+|.++..   .+....+..|..++..+     +|||+|+.+++-.+.
T Consensus      1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~l-----nHpNlV~YyGVEvHR 1306 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGL-----NHPNLVRYYGVEVHR 1306 (1509)
T ss_pred             cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhc-----cCccccccCceeecH
Confidence            3455788889999999999999999999999999988632   23344567789999988     889999999999999


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      ..++|.|||| +|+|.+.++..+  ..++...+.|..|++.||.|||+.|||||||||.|||++..|.+|.+|||.|+..
T Consensus      1307 ekv~IFMEyC~~GsLa~ll~~gr--i~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki 1384 (1509)
T KOG4645|consen 1307 EKVYIFMEYCEGGSLASLLEHGR--IEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKI 1384 (1509)
T ss_pred             HHHHHHHHHhccCcHHHHHHhcc--hhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEe
Confidence            9999999999 999999998754  6888889999999999999999999999999999999976655555555444322


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCC---CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                      ..+.              -|++      ..-...+||+.|||||++.+.   +..-+.||||||||+.||+||+.||...
T Consensus      1385 ~~~~--------------~~~~------~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~ 1444 (1509)
T KOG4645|consen 1385 KNNA--------------QTMP------GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAEL 1444 (1509)
T ss_pred             cCch--------------hcCC------HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhc
Confidence            2110              0010      011235899999999999864   4678999999999999999999999865


Q ss_pred             Ch-HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHh
Q 013973          327 EN-LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  405 (433)
Q Consensus       327 ~~-~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  405 (433)
                      +. ..+..+  -..|..|+                                              .|..++.+.+|||..
T Consensus      1445 dne~aIMy~--V~~gh~Pq----------------------------------------------~P~~ls~~g~dFle~ 1476 (1509)
T KOG4645|consen 1445 DNEWAIMYH--VAAGHKPQ----------------------------------------------IPERLSSEGRDFLEH 1476 (1509)
T ss_pred             cchhHHHhH--HhccCCCC----------------------------------------------CchhhhHhHHHHHHH
Confidence            44 333222  22333331                                              233567889999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCC
Q 013973          406 LLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       406 ~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      ||+.||++|+++.|+|+|-|-+..
T Consensus      1477 Cl~~dP~~Rw~~~qlle~~f~~~~ 1500 (1509)
T KOG4645|consen 1477 CLEQDPKMRWTASQLLEHAFGKSC 1500 (1509)
T ss_pred             HHhcCchhhhHHHHHHHhhccccc
Confidence            999999999999999999997643

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=3.6e-39  Score=319.86  Aligned_cols=250  Identities=22%  Similarity=0.313  Sum_probs=192.4

Q ss_pred             cCcEEEEeeeeccccEEEEEEEEC-----CCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~-----~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      .++|.+.+.||+|+||.||+|++.     .+++.||+|+++..  ......+..|+.++.++.    .|+||+.+++.+.
T Consensus        36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~----~H~niv~~~~~~~  111 (401)
T cd05107          36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLG----PHLNIVNLLGACT  111 (401)
T ss_pred             HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcC----CCCCeEEEEEEEc
Confidence            356899999999999999999864     35578999999743  222345778999998872    2688999999999


Q ss_pred             cCCeEEEEEecC-CCCHHHHHHhcCC------------------------------------------------------
Q 013973          169 YRNHICIVFEKL-GSSLYDFLRKNNY------------------------------------------------------  193 (433)
Q Consensus       169 ~~~~~~lV~e~~-~~~L~~~l~~~~~------------------------------------------------------  193 (433)
                      ..+.+++||||+ +|+|.++++....                                                      
T Consensus       112 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (401)
T cd05107         112 KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP  191 (401)
T ss_pred             cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence            999999999999 9999999975421                                                      


Q ss_pred             ------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceE
Q 013973          194 ------------------------------------------RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVL  231 (433)
Q Consensus       194 ------------------------------------------~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NIL  231 (433)
                                                                ..+++..+..++.||+.||+|||+.+|+||||||+|||
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiL  271 (401)
T cd05107         192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVL  271 (401)
T ss_pred             hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEE
Confidence                                                      24677788899999999999999999999999999999


Q ss_pred             eeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhCCCCCCcchh
Q 013973          232 LVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYPCDI  306 (433)
Q Consensus       232 l~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Dv  306 (433)
                      ++.++                           .+||+|||++......     .....++..|+|||++.+..++.++||
T Consensus       272 l~~~~---------------------------~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv  324 (401)
T cd05107         272 ICEGK---------------------------LVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDV  324 (401)
T ss_pred             EeCCC---------------------------EEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHH
Confidence            96544                           4555555555432111     112356788999999998889999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHH
Q 013973          307 WSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ  385 (433)
Q Consensus       307 wSlGv~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (433)
                      |||||++|||++ |..||......+.......                      .+. .                     
T Consensus       325 wslGvil~e~l~~g~~P~~~~~~~~~~~~~~~----------------------~~~-~---------------------  360 (401)
T cd05107         325 WSFGILLWEIFTLGGTPYPELPMNEQFYNAIK----------------------RGY-R---------------------  360 (401)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCchHHHHHHHH----------------------cCC-C---------------------
Confidence            999999999998 8999976544332221110                      000 0                     


Q ss_pred             HHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          386 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       386 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                         ...+...+.++.+|+.+||+.+|.+||++.||++.
T Consensus       361 ---~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         361 ---MAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             ---CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence               00122456789999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=100.00  E-value=4.3e-39  Score=330.98  Aligned_cols=272  Identities=21%  Similarity=0.334  Sum_probs=177.2

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCC----CeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecce-----
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRER----KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW-----  166 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~----~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~-----  166 (433)
                      .++|++.+.||+|+||.||+|.+..+    +..||+|.+..... .     |......+.+..  +.++..+...     
T Consensus       131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-~-----e~~~~e~l~~~~--~~~~~~~~~~~~~~~  202 (566)
T PLN03225        131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-V-----EIWMNERVRRAC--PNSCADFVYGFLEPV  202 (566)
T ss_pred             cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-h-----HHHHHHHHHhhc--hhhHHHHHHhhhccc
Confidence            46899999999999999999999988    89999998763221 1     111222221110  0111111111     


Q ss_pred             -eecCCeEEEEEecC-CCCHHHHHHhcCCC------------------CCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q 013973          167 -FDYRNHICIVFEKL-GSSLYDFLRKNNYR------------------SFPIDLVREIARQLLECIAFMHDLCMIHTDLK  226 (433)
Q Consensus       167 -~~~~~~~~lV~e~~-~~~L~~~l~~~~~~------------------~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlK  226 (433)
                       ......+++||||+ +++|.+++......                  ......+..++.||+.||+|||++||||||||
T Consensus       203 ~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLK  282 (566)
T PLN03225        203 SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVK  282 (566)
T ss_pred             ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCC
Confidence             24567899999999 88999998754311                  01234466899999999999999999999999


Q ss_pred             CCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC----CCceeecCcccchhhhhCC----
Q 013973          227 PENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVSTRHYRAPEVILGL----  298 (433)
Q Consensus       227 p~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~----  298 (433)
                      |+|||++.                          .++.+||+|||++......    ....+||+.|||||.+...    
T Consensus       283 P~NILl~~--------------------------~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~  336 (566)
T PLN03225        283 PQNIIFSE--------------------------GSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTP  336 (566)
T ss_pred             HHHEEEeC--------------------------CCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCC
Confidence            99999953                          2356788888877643322    2345789999999976432    


Q ss_pred             ------------------CCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhcc
Q 013973          299 ------------------GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR  360 (433)
Q Consensus       299 ------------------~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~  360 (433)
                                        .++.++|||||||++|||+++..++.  +....+..+....+.....+.......       
T Consensus       337 ~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~-------  407 (566)
T PLN03225        337 SAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSD--SNLIQFNRQLKRNDYDLVAWRKLVEPR-------  407 (566)
T ss_pred             CCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCc--hHHHHHHHHHHhcCCcHHHHHHhhccc-------
Confidence                              23456799999999999999766643  333333332222222111111100000       


Q ss_pred             CcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          361 GRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                                .......          .....+.......+||.+||++||++|||+.|+|+||||+...
T Consensus       408 ----------~~~~~~~----------~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~  457 (566)
T PLN03225        408 ----------ASPDLRR----------GFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREG  457 (566)
T ss_pred             ----------cchhhhh----------hhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCC
Confidence                      0000000          0011233445677999999999999999999999999998754

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=3.6e-39  Score=305.75  Aligned_cols=246  Identities=23%  Similarity=0.356  Sum_probs=191.9

Q ss_pred             CcEEEEeeeeccccEEEEEEEEC-----CCCeEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~-----~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      .+|++.++||+|+||.||+|...     .++..+|+|.+... ......+..|+++++.+     .|+||+++++++...
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~   79 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVL-----QHQHIVRFYGVCTEG   79 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcC-----CCCCCceEEEEEecC
Confidence            56889999999999999999743     35678999988643 33445677889888887     568899999999999


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNY-------------RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSE  236 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~-------------~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~  236 (433)
                      ...++||||+ +++|.+++.....             ..+++..+..++.||+.||+|||+.||+||||||+|||+++++
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~  159 (280)
T cd05092          80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGL  159 (280)
T ss_pred             CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCC
Confidence            9999999999 8999999976431             2488999999999999999999999999999999999996555


Q ss_pred             ccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHHH
Q 013973          237 YIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGC  311 (433)
Q Consensus       237 ~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv  311 (433)
                      .++                           |+|||++.......     ....+++.|+|||++.+..++.++|||||||
T Consensus       160 ~~k---------------------------L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~  212 (280)
T cd05092         160 VVK---------------------------IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGV  212 (280)
T ss_pred             CEE---------------------------ECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHH
Confidence            544                           44555443221111     1123577899999999999999999999999


Q ss_pred             HHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhh
Q 013973          312 ILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ  390 (433)
Q Consensus       312 ~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (433)
                      ++|||++ |.+||......+....+....                      ..                          .
T Consensus       213 il~el~~~g~~p~~~~~~~~~~~~~~~~~----------------------~~--------------------------~  244 (280)
T cd05092         213 VLWEIFTYGKQPWYQLSNTEAIECITQGR----------------------EL--------------------------E  244 (280)
T ss_pred             HHHHHHcCCCCCCccCCHHHHHHHHHcCc----------------------cC--------------------------C
Confidence            9999998 999997665544332211100                      00                          0


Q ss_pred             hcCCchhHHHHHHHhccccCCCCCCCHHHHhc
Q 013973          391 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       391 ~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                      .+..+++.+.+||.+||+.||.+||++.||++
T Consensus       245 ~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         245 RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            12345678999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=4.3e-39  Score=303.00  Aligned_cols=251  Identities=23%  Similarity=0.307  Sum_probs=192.0

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCC---eEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERK---EMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~---~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      ++|++.+.||+|+||.||+|.++.++   ..+|+|.++..  ......+..|+.+++++     .|+||+++++++...+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~   78 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQF-----DHPNIIHLEGVVTKSK   78 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhC-----CCCCcceEEEEEecCC
Confidence            56999999999999999999886444   37999988642  23445677888888887     6789999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      ..|+||||+ +++|.+++.... ..+++.++..++.|++.||.|||++||+||||||+|||++.++.++++|||++....
T Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~  157 (267)
T cd05066          79 PVMIVTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLE  157 (267)
T ss_pred             ccEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccc
Confidence            999999999 889999998654 368999999999999999999999999999999999999665555555555443221


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChH
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  329 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~  329 (433)
                      .....          .           .......++..|+|||++.+..++.++|+|||||++||+++ |..||...+..
T Consensus       158 ~~~~~----------~-----------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~  216 (267)
T cd05066         158 DDPEA----------A-----------YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ  216 (267)
T ss_pred             cccce----------e-----------eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH
Confidence            11000          0           00001123567999999998899999999999999999887 99999876554


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +....+.+..                        ..+                        .+...+..+.+++.+||+.
T Consensus       217 ~~~~~~~~~~------------------------~~~------------------------~~~~~~~~~~~li~~~l~~  248 (267)
T cd05066         217 DVIKAIEEGY------------------------RLP------------------------APMDCPAALHQLMLDCWQK  248 (267)
T ss_pred             HHHHHHhCCC------------------------cCC------------------------CCCCCCHHHHHHHHHHccc
Confidence            4333221110                        000                        0123466889999999999


Q ss_pred             CCCCCCCHHHHhc
Q 013973          410 DPTDRLTAREALR  422 (433)
Q Consensus       410 dP~~R~ta~ell~  422 (433)
                      +|.+||++.++++
T Consensus       249 ~p~~Rp~~~~i~~  261 (267)
T cd05066         249 DRNERPKFEQIVS  261 (267)
T ss_pred             CchhCCCHHHHHH
Confidence            9999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=3.5e-39  Score=305.78  Aligned_cols=244  Identities=20%  Similarity=0.242  Sum_probs=184.1

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeE----EEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEM----VAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~----vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      ++|++.+.||+|+||.||+|.+..+++.    +|+|.+...  ......+..|+..++.+     .|+||+++++++. .
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-----~h~~iv~~~~~~~-~   80 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSL-----DHAYIVRLLGICP-G   80 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcC-----CCCCcceEEEEEC-C
Confidence            4699999999999999999998877763    677776422  12223444555565555     6789999999875 4


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      ...++++||+ +|+|.+++.... ..+++..+..++.||+.||.|||++|++||||||+|||++.++             
T Consensus        81 ~~~~~i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~-------------  146 (279)
T cd05111          81 ASLQLVTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDS-------------  146 (279)
T ss_pred             CccEEEEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCC-------------
Confidence            5578899998 899999997643 4689999999999999999999999999999999999995544             


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALF  323 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf  323 (433)
                                    .+||+|||.++......     ....|+..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus       147 --------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~  212 (279)
T cd05111         147 --------------IVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPY  212 (279)
T ss_pred             --------------cEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCC
Confidence                          45555555554322211     12346778999999998899999999999999999998 99999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      .+.........+                       ..+....                         .+...+.++.+++
T Consensus       213 ~~~~~~~~~~~~-----------------------~~~~~~~-------------------------~~~~~~~~~~~li  244 (279)
T cd05111         213 AGMRPHEVPDLL-----------------------EKGERLA-------------------------QPQICTIDVYMVM  244 (279)
T ss_pred             CCCCHHHHHHHH-----------------------HCCCcCC-------------------------CCCCCCHHHHHHH
Confidence            876543322211                       1111000                         0112345788899


Q ss_pred             HhccccCCCCCCCHHHHhc
Q 013973          404 QGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~  422 (433)
                      .+||..||++|||+.|+++
T Consensus       245 ~~c~~~~p~~Rps~~el~~  263 (279)
T cd05111         245 VKCWMIDENVRPTFKELAN  263 (279)
T ss_pred             HHHcCCCcccCcCHHHHHH
Confidence            9999999999999999876

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=6e-39  Score=305.39  Aligned_cols=254  Identities=25%  Similarity=0.409  Sum_probs=195.1

Q ss_pred             cEEEEeeeeccccEEEEEEEEC---CCCeEEEEEEeecch-----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           98 RYKIHSKMGEGTFGQVLECWDR---ERKEMVAIKIVRGIK-----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~---~~~~~vAiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      +|++.+.||+|+||.||+|.+.   .+++.||||+++...     .....+..|+.++.++.    +|++++.+.+.+..
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~----~~~~i~~~~~~~~~   76 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVR----RCPFLVTLHYAFQT   76 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhcc----CCcchhhhheeeec
Confidence            3889999999999999999864   467889999987432     12344567888888773    45789999999999


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      ...+|+||||+ +++|.+++....  .+++..++.++.|++.||.|||+.|++|+||||+||+++.              
T Consensus        77 ~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~--------------  140 (288)
T cd05583          77 DTKLHLILDYVNGGELFTHLYQRE--HFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDS--------------  140 (288)
T ss_pred             CCEEEEEEecCCCCcHHHHHhhcC--CcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC--------------
Confidence            99999999999 889999987653  6899999999999999999999999999999999999954              


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCC--CCCcchhHHHHHHHHHHHhCCCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLG--WTYPCDIWSVGCILVELCTGEAL  322 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGv~l~elltg~~P  322 (433)
                                   ++.++|+|||.+.......    ....|+..|+|||.+.+..  ++.++|+||||+++|+|++|..|
T Consensus       141 -------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p  207 (288)
T cd05583         141 -------------EGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASP  207 (288)
T ss_pred             -------------CCCEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCC
Confidence                         4456777777665432221    2246889999999987755  78899999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       323 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      |...+.......+.+.                   +....                          ...+..++.++.++
T Consensus       208 ~~~~~~~~~~~~~~~~-------------------~~~~~--------------------------~~~~~~~~~~l~~l  242 (288)
T cd05583         208 FTVDGEQNSQSEISRR-------------------ILKSK--------------------------PPFPKTMSAEARDF  242 (288)
T ss_pred             cccCcccchHHHHHHH-------------------HHccC--------------------------CCCCcccCHHHHHH
Confidence            9643321111111000                   00000                          01123456788999


Q ss_pred             HHhccccCCCCCCC---HHHHhcCCCCCCC
Q 013973          403 LQGLLRYDPTDRLT---AREALRHPFFTRD  429 (433)
Q Consensus       403 i~~~L~~dP~~R~t---a~ell~hp~f~~~  429 (433)
                      |.+||+.||++|||   +.++|+||||+..
T Consensus       243 i~~~l~~~p~~R~t~~~~~~~l~~~~~~~~  272 (288)
T cd05583         243 IQKLLEKDPKKRLGANGADEIKNHPFFQGI  272 (288)
T ss_pred             HHHHhcCCHhhccCcchHHHHhcCcccccC
Confidence            99999999999998   5688999999864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=9.3e-39  Score=308.07  Aligned_cols=248  Identities=21%  Similarity=0.333  Sum_probs=191.0

Q ss_pred             cCcEEEEeeeeccccEEEEEEEEC-------CCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecce
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDR-------ERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  166 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~-------~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~  166 (433)
                      .++|.+.+.||+|+||.||+|.+.       .....||+|+++...  .....+..|+.+++.+.    .|++|++++++
T Consensus        11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~----~h~~iv~~~~~   86 (314)
T cd05099          11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIG----KHKNIINLLGV   86 (314)
T ss_pred             HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhcc----CCCCeeeEEEE
Confidence            367999999999999999999763       234679999987432  23345667888887762    46889999999


Q ss_pred             eecCCeEEEEEecC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceE
Q 013973          167 FDYRNHICIVFEKL-GSSLYDFLRKNN--------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVL  231 (433)
Q Consensus       167 ~~~~~~~~lV~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NIL  231 (433)
                      +...+.+|+||||+ +++|.+++....              ...+++..+..++.||+.||.|||++||+||||||+|||
T Consensus        87 ~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nil  166 (314)
T cd05099          87 CTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVL  166 (314)
T ss_pred             EccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEE
Confidence            99999999999999 899999997632              135889999999999999999999999999999999999


Q ss_pred             eeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchh
Q 013973          232 LVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDI  306 (433)
Q Consensus       232 l~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Dv  306 (433)
                      ++.++                           .+||+|||.++......     ....++..|+|||++.+..++.++||
T Consensus       167 l~~~~---------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  219 (314)
T cd05099         167 VTEDN---------------------------VMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDV  219 (314)
T ss_pred             EcCCC---------------------------cEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchh
Confidence            96544                           45555555554322111     11124567999999999889999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHH
Q 013973          307 WSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ  385 (433)
Q Consensus       307 wSlGv~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (433)
                      |||||++|+|++ |..||.+....+.+..+..                       +..                      
T Consensus       220 wslG~~l~el~~~g~~p~~~~~~~~~~~~~~~-----------------------~~~----------------------  254 (314)
T cd05099         220 WSFGILMWEIFTLGGSPYPGIPVEELFKLLRE-----------------------GHR----------------------  254 (314)
T ss_pred             hHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----------------------CCC----------------------
Confidence            999999999999 8999987655444432211                       000                      


Q ss_pred             HHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhc
Q 013973          386 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       386 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                         ...+...+.++.+|+.+||+.||++|||+.|+++
T Consensus       255 ---~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~  288 (314)
T cd05099         255 ---MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE  288 (314)
T ss_pred             ---CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence               0112345668999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=5.3e-39  Score=307.08  Aligned_cols=253  Identities=22%  Similarity=0.339  Sum_probs=190.8

Q ss_pred             CcEEEEeeeeccccEEEEEEEECC----------------CCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCC
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRE----------------RKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGN  158 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~----------------~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~  158 (433)
                      ++|++.+.||+|+||.||+|.+..                ++..||+|+++..  ......+..|+.+++.+     .|+
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l-----~~~   79 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRL-----KDP   79 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhC-----CCC
Confidence            569999999999999999986432                3457999998743  23345677899999888     568


Q ss_pred             ceEEecceeecCCeEEEEEecC-CCCHHHHHHhcCC---------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCC
Q 013973          159 RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNY---------RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPE  228 (433)
Q Consensus       159 ~i~~~~~~~~~~~~~~lV~e~~-~~~L~~~l~~~~~---------~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~  228 (433)
                      +++++++++...+..++||||+ +++|.+++.....         ..+++..+..++.||+.||+|||+.||+||||||+
T Consensus        80 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~  159 (296)
T cd05095          80 NIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATR  159 (296)
T ss_pred             CcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChh
Confidence            8999999999999999999999 8999999976431         24778899999999999999999999999999999


Q ss_pred             ceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCc
Q 013973          229 NVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYP  303 (433)
Q Consensus       229 NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~  303 (433)
                      |||++.++                           .++|+|||++.......     ....++..|+|||+..+..++.+
T Consensus       160 Nili~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~  212 (296)
T cd05095         160 NCLVGKNY---------------------------TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTA  212 (296)
T ss_pred             eEEEcCCC---------------------------CEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccch
Confidence            99996544                           45555555554322111     11234678999999988899999


Q ss_pred             chhHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccc
Q 013973          304 CDIWSVGCILVELCT--GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL  381 (433)
Q Consensus       304 ~DvwSlGv~l~ellt--g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  381 (433)
                      +|+|||||++|||++  |..||...+..+.........                  ...+...                 
T Consensus       213 ~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~------------------~~~~~~~-----------------  257 (296)
T cd05095         213 SDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFF------------------RDQGRQV-----------------  257 (296)
T ss_pred             hhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHH------------------hhccccc-----------------
Confidence            999999999999998  778997665544332211100                  0000000                 


Q ss_pred             hhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhc
Q 013973          382 PRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                            ....+..++..+.+|+.+||+.||++||++.|+++
T Consensus       258 ------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         258 ------YLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             ------cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence                  00112345678999999999999999999999864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.9e-40  Score=319.83  Aligned_cols=246  Identities=24%  Similarity=0.338  Sum_probs=198.3

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCe---E-EEEEEeec----chhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKE---M-VAIKIVRG----IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~---~-vAiK~~~~----~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      ++-.+.++||+|+||.||+|..+..+.   . ||+|..+.    ......++..|..+++++     +|+||++++|+..
T Consensus       157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l-----~H~NVVr~yGVa~  231 (474)
T KOG0194|consen  157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQL-----NHPNVVRFYGVAV  231 (474)
T ss_pred             cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhC-----CCCCEEEEEEEEc
Confidence            445667999999999999999876532   3 89999874    245567788999999998     8899999999999


Q ss_pred             cCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC
Q 013973          169 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       169 ~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                      ....++||||+| ||+|.+||++... .++..+...++.+.+.||+|||++++|||||-.+|+|+...+.+||+|||++ 
T Consensus       232 ~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs-  309 (474)
T KOG0194|consen  232 LEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLS-  309 (474)
T ss_pred             CCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccc-
Confidence            999999999999 9999999998763 6999999999999999999999999999999999999976665555555554 


Q ss_pred             CCCCCCcccccCCCCCCEEEEecCCccccCCCC--C-ceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCC
Q 013973          248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--N-YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALF  323 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~-~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf  323 (433)
                                                +......  . ...-...|+|||.+....|+.++|||||||++||+.+ |..||
T Consensus       310 --------------------------~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py  363 (474)
T KOG0194|consen  310 --------------------------RAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPY  363 (474)
T ss_pred             --------------------------cCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCC
Confidence                                      3221000  0 0113567999999999999999999999999999999 88999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      .+....+....+.......                                               ..+...+.++..++
T Consensus       364 ~g~~~~~v~~kI~~~~~r~-----------------------------------------------~~~~~~p~~~~~~~  396 (474)
T KOG0194|consen  364 PGMKNYEVKAKIVKNGYRM-----------------------------------------------PIPSKTPKELAKVM  396 (474)
T ss_pred             CCCCHHHHHHHHHhcCccC-----------------------------------------------CCCCCCHHHHHHHH
Confidence            9988876665543221111                                               11235567888999


Q ss_pred             HhccccCCCCCCCHHHHhc
Q 013973          404 QGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~  422 (433)
                      .+|+..||++||++.++.+
T Consensus       397 ~~c~~~~p~~R~tm~~i~~  415 (474)
T KOG0194|consen  397 KQCWKKDPEDRPTMSTIKK  415 (474)
T ss_pred             HHhccCChhhccCHHHHHH
Confidence            9999999999999987754

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=6.4e-39  Score=302.07  Aligned_cols=251  Identities=22%  Similarity=0.322  Sum_probs=191.7

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCe---EEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKE---MVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~---~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      +.|++.+.||+|+||.||+|.++.+++   .||||++...  ......+..|+.+++.+     .|+|++++.+++....
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~ni~~~~~~~~~~~   78 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF-----DHPNIIHLEGVVTKSR   78 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhC-----CCcCcceEEEEECCCC
Confidence            458999999999999999999887664   6999998642  33455677889888887     6789999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+++||||+ +++|.+++.... ..+++..+..++.|++.||.|||++|++|+||||+|||++.++.++++|||++....
T Consensus        79 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~  157 (269)
T cd05065          79 PVMIITEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE  157 (269)
T ss_pred             ceEEEEecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccc
Confidence            999999999 889999987653 468999999999999999999999999999999999999655555555554433221


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCCCce--eecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI--VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE  327 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~--~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~  327 (433)
                      ......                     ......  .++..|+|||++.+..++.++|||||||++||+++ |..||...+
T Consensus       158 ~~~~~~---------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~  216 (269)
T cd05065         158 DDTSDP---------------------TYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS  216 (269)
T ss_pred             cCcccc---------------------ccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCC
Confidence            100000                     000001  12457999999998899999999999999999886 999997765


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ..+....+...                        ...+                        .+..++..+.+++.+||
T Consensus       217 ~~~~~~~i~~~------------------------~~~~------------------------~~~~~~~~~~~li~~~l  248 (269)
T cd05065         217 NQDVINAIEQD------------------------YRLP------------------------PPMDCPTALHQLMLDCW  248 (269)
T ss_pred             HHHHHHHHHcC------------------------CcCC------------------------CcccCCHHHHHHHHHHc
Confidence            54433322110                        0000                        11245667899999999


Q ss_pred             ccCCCCCCCHHHHhc
Q 013973          408 RYDPTDRLTAREALR  422 (433)
Q Consensus       408 ~~dP~~R~ta~ell~  422 (433)
                      +.||.+||++.+++.
T Consensus       249 ~~~p~~Rp~~~~i~~  263 (269)
T cd05065         249 QKDRNARPKFGQIVS  263 (269)
T ss_pred             CCChhhCcCHHHHHH
Confidence            999999999999975

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=7.8e-39  Score=307.13  Aligned_cols=249  Identities=18%  Similarity=0.306  Sum_probs=191.8

Q ss_pred             cCcEEEEeeeeccccEEEEEEEEC-------CCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecce
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDR-------ERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  166 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~-------~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~  166 (433)
                      .++|.+.+.||+|+||.||+|+..       .++..||+|.+...  ......+..|+.+++.+.    .|+||+++++.
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~----~h~~i~~~~~~   89 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG----KHKNIINLLGA   89 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhc----cCCCchheeEE
Confidence            367999999999999999999752       23457999998642  233456778888888773    45789999999


Q ss_pred             eecCCeEEEEEecC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceE
Q 013973          167 FDYRNHICIVFEKL-GSSLYDFLRKNN--------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVL  231 (433)
Q Consensus       167 ~~~~~~~~lV~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NIL  231 (433)
                      +...+..|+||||+ +++|.+++....              ...+++..+..++.||+.||.|||++||+||||||+|||
T Consensus        90 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nil  169 (304)
T cd05101          90 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVL  169 (304)
T ss_pred             EecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEE
Confidence            99999999999999 889999997642              124788889999999999999999999999999999999


Q ss_pred             eeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchh
Q 013973          232 LVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDI  306 (433)
Q Consensus       232 l~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Dv  306 (433)
                      ++.++.                           +||+|||.+.......     ....++..|+|||++.+..++.++||
T Consensus       170 i~~~~~---------------------------~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  222 (304)
T cd05101         170 VTENNV---------------------------MKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV  222 (304)
T ss_pred             EcCCCc---------------------------EEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhH
Confidence            965554                           4555555444322111     11235678999999998889999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHH
Q 013973          307 WSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ  385 (433)
Q Consensus       307 wSlGv~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (433)
                      ||||+++|+|++ |..||.+.+..+....+...                      ...                      
T Consensus       223 ~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~----------------------~~~----------------------  258 (304)
T cd05101         223 WSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG----------------------HRM----------------------  258 (304)
T ss_pred             HHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC----------------------CcC----------------------
Confidence            999999999998 88999776554443322110                      000                      


Q ss_pred             HHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          386 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       386 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                          ..+..++.++.+|+.+||+.+|.+|||+.|+++.
T Consensus       259 ----~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         259 ----DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             ----CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence                0122456789999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=6.7e-39  Score=299.23  Aligned_cols=244  Identities=25%  Similarity=0.366  Sum_probs=193.3

Q ss_pred             EEEEeeeeccccEEEEEEEECCCC----eEEEEEEeecchh--hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           99 YKIHSKMGEGTFGQVLECWDRERK----EMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~~----~~vAiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      |++.+.||.|+||.||+|.+..++    ..||+|+++....  ..+.+..|+.+++.+     +|++++++++.+.+.+.
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~   75 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKL-----DHPNIVKLLGVCTEEEP   75 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhc-----CCCchheEEEEEcCCCe
Confidence            357789999999999999998766    8899999974432  456777899988888     66889999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      .+++|||+ +++|.+++.......+++..+..++.|++.||+|||+.|++|+||||+||++++++.              
T Consensus        76 ~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~--------------  141 (258)
T smart00219       76 LMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLV--------------  141 (258)
T ss_pred             eEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCe--------------
Confidence            99999999 899999998754333999999999999999999999999999999999999965554              


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCCCc----eeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQNY----IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH  326 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~----~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~  326 (433)
                                   ++|+|||.+.........    ..++..|+|||.+.+..++.++|+||||+++|+|++ |.+||...
T Consensus       142 -------------~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~  208 (258)
T smart00219      142 -------------VKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM  208 (258)
T ss_pred             -------------EEEcccCCceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Confidence                         555555554433222111    126788999999988889999999999999999998 88999875


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      +..+....+...                       ..                         ...+...+.++.+++.+|
T Consensus       209 ~~~~~~~~~~~~-----------------------~~-------------------------~~~~~~~~~~~~~~i~~~  240 (258)
T smart00219      209 SNEEVLEYLKKG-----------------------YR-------------------------LPKPENCPPEIYKLMLQC  240 (258)
T ss_pred             CHHHHHHHHhcC-----------------------CC-------------------------CCCCCcCCHHHHHHHHHH
Confidence            554443322110                       00                         001123567899999999


Q ss_pred             cccCCCCCCCHHHHhc
Q 013973          407 LRYDPTDRLTAREALR  422 (433)
Q Consensus       407 L~~dP~~R~ta~ell~  422 (433)
                      |+.||++|||+.|+++
T Consensus       241 l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      241 WAEDPEDRPTFSELVE  256 (258)
T ss_pred             CcCChhhCcCHHHHHh
Confidence            9999999999999986

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=9.1e-39  Score=298.75  Aligned_cols=246  Identities=22%  Similarity=0.301  Sum_probs=189.3

Q ss_pred             eeeeccccEEEEEEEECC-CC--eEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEE
Q 013973          103 SKMGEGTFGQVLECWDRE-RK--EMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  177 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~-~~--~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~  177 (433)
                      +.||+|++|.||+|.+.. ++  ..||+|.+....  ...+.+..|+.+++++     .|+|++++++.+.. ..+++||
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~-~~~~~v~   74 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSL-----DHENLIRLYGVVLT-HPLMMVT   74 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhc-----CCCCccceeEEEcC-CeEEEEE
Confidence            468999999999998865 33  369999987433  3455677899998888     66889999999888 8999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCccc
Q 013973          178 EKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  256 (433)
Q Consensus       178 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~  256 (433)
                      ||+ +++|.+++.......+++..+..++.|++.||+|||++||+|+||||+||+++.++.++|+|||++..........
T Consensus        75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~  154 (257)
T cd05040          75 ELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHY  154 (257)
T ss_pred             EecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccce
Confidence            999 8999999987643468999999999999999999999999999999999999766655555555443321110000


Q ss_pred             ccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 013973          257 KRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMM  335 (433)
Q Consensus       257 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~~~~~i  335 (433)
                                           .......++..|+|||++.+..++.++|||||||++|+|++ |..||...+..+....+
T Consensus       155 ---------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~  213 (257)
T cd05040         155 ---------------------VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKI  213 (257)
T ss_pred             ---------------------ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence                                 00012346788999999999899999999999999999999 99999876655544332


Q ss_pred             HHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCC
Q 013973          336 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  415 (433)
Q Consensus       336 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  415 (433)
                      ......                     +                          ..+...+.++.+++.+||+.+|++||
T Consensus       214 ~~~~~~---------------------~--------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp  246 (257)
T cd05040         214 DKEGER---------------------L--------------------------ERPEACPQDIYNVMLQCWAHNPADRP  246 (257)
T ss_pred             HhcCCc---------------------C--------------------------CCCccCCHHHHHHHHHHCCCCcccCC
Confidence            210000                     0                          01123466899999999999999999


Q ss_pred             CHHHHhc
Q 013973          416 TAREALR  422 (433)
Q Consensus       416 ta~ell~  422 (433)
                      ++.++++
T Consensus       247 s~~~~~~  253 (257)
T cd05040         247 TFAALRE  253 (257)
T ss_pred             CHHHHHH
Confidence            9999975

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=8.2e-39  Score=300.44  Aligned_cols=244  Identities=20%  Similarity=0.265  Sum_probs=184.4

Q ss_pred             eeeeccccEEEEEEEECC------------CCeEEEEEEeecchh-hHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973          103 SKMGEGTFGQVLECWDRE------------RKEMVAIKIVRGIKK-YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~------------~~~~vAiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      +.||+|+||.||+|....            ....+|+|++..... ....+..|+.++..+     .|+||+++++++..
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l-----~hp~iv~~~~~~~~   75 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQV-----SHKHIVLLYGVCVR   75 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhC-----CCCCEeeEEEEEec
Confidence            468999999999998532            223589998764322 233455667777766     67999999999999


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      ....++||||+ +++|..++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++..+         
T Consensus        76 ~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~---------  145 (262)
T cd05077          76 DVENIMVEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDG---------  145 (262)
T ss_pred             CCCCEEEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccC---------
Confidence            99999999999 788888887543 3689999999999999999999999999999999999997654211         


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhh-CCCCCCcchhHHHHHHHHHHH-hCCCCCCCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELC-TGEALFQTH  326 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGv~l~ell-tg~~Pf~~~  326 (433)
                                 .....++++|||.+...... ....|+..|+|||++. +..++.++|||||||++|||+ +|..||...
T Consensus       146 -----------~~~~~~~l~d~g~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~  213 (262)
T cd05077         146 -----------ECGPFIKLSDPGIPITVLSR-QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDK  213 (262)
T ss_pred             -----------CCCceeEeCCCCCCccccCc-ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCc
Confidence                       12334889999987654322 2346888999999987 466899999999999999998 588888764


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      ...+.....                        .+..                          ......+.++.+||.+|
T Consensus       214 ~~~~~~~~~------------------------~~~~--------------------------~~~~~~~~~~~~li~~c  243 (262)
T cd05077         214 TLAEKERFY------------------------EGQC--------------------------MLVTPSCKELADLMTHC  243 (262)
T ss_pred             chhHHHHHH------------------------hcCc--------------------------cCCCCChHHHHHHHHHH
Confidence            432221100                        0000                          00123356789999999


Q ss_pred             cccCCCCCCCHHHHhcC
Q 013973          407 LRYDPTDRLTAREALRH  423 (433)
Q Consensus       407 L~~dP~~R~ta~ell~h  423 (433)
                      |+.||++||++.+++++
T Consensus       244 l~~dp~~Rp~~~~il~~  260 (262)
T cd05077         244 MNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             cCCChhhCcCHHHHHHh
Confidence            99999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=1.1e-38  Score=298.62  Aligned_cols=237  Identities=24%  Similarity=0.371  Sum_probs=182.8

Q ss_pred             eeeccccEEEEEEEEC--CCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEec
Q 013973          104 KMGEGTFGQVLECWDR--ERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEK  179 (433)
Q Consensus       104 ~iG~G~~g~V~~~~~~--~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~  179 (433)
                      .||+|+||.||+|.+.  .++..||+|++....  ...+.+..|+.+++++     .|++++++++.++. ...++||||
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~ii~~~~~~~~-~~~~lv~e~   75 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQL-----DNPYIVRMIGVCEA-EALMLVMEM   75 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhc-----CCCCeEEEEEEEcC-CCeEEEEEe
Confidence            4899999999999765  455679999986432  2345577899999988     66889999998764 578999999


Q ss_pred             C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCccccc
Q 013973          180 L-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKR  258 (433)
Q Consensus       180 ~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~  258 (433)
                      + +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.                     
T Consensus        76 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~---------------------  133 (257)
T cd05115          76 ASGGPLNKFLSGKK-DEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHY---------------------  133 (257)
T ss_pred             CCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCc---------------------
Confidence            9 899999987543 46899999999999999999999999999999999999965554                     


Q ss_pred             CCCCCCEEEEecCCccccCCCCC------ceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChHHH
Q 013973          259 MPKSSAIKVIDFGSTTYERPDQN------YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH  331 (433)
Q Consensus       259 ~~~~~~~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~~  331 (433)
                            +||+|||++........      ...++..|+|||++....++.++|||||||++|||++ |..||......+.
T Consensus       134 ------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~  207 (257)
T cd05115         134 ------AKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEV  207 (257)
T ss_pred             ------EEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHH
Confidence                  45555554432221111      1123568999999998889999999999999999996 9999987665443


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      ...+.                       .+..                         .+.+...+.++.++|.+||+.||
T Consensus       208 ~~~~~-----------------------~~~~-------------------------~~~~~~~~~~l~~li~~c~~~~~  239 (257)
T cd05115         208 MSFIE-----------------------QGKR-------------------------LDCPAECPPEMYALMKDCWIYKW  239 (257)
T ss_pred             HHHHH-----------------------CCCC-------------------------CCCCCCCCHHHHHHHHHHcCCCh
Confidence            32221                       1100                         01123456789999999999999


Q ss_pred             CCCCCHHHHhc
Q 013973          412 TDRLTAREALR  422 (433)
Q Consensus       412 ~~R~ta~ell~  422 (433)
                      ++||++.++++
T Consensus       240 ~~Rp~~~~i~~  250 (257)
T cd05115         240 EDRPNFAKVEE  250 (257)
T ss_pred             hhCcCHHHHHH
Confidence            99999998865

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=7.4e-39  Score=304.77  Aligned_cols=246  Identities=20%  Similarity=0.314  Sum_probs=191.3

Q ss_pred             CcEEEEeeeeccccEEEEEEEECC-----CCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRE-----RKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~-----~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      ++|++.+.||+|+||.||+|.+..     ++..||+|++...  ......+..|+.+++.+     .|++++++++++..
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l-----~h~~iv~~~~~~~~   79 (288)
T cd05050           5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-----DHPNIVKLLGVCAV   79 (288)
T ss_pred             HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhc-----CCCchheEEEEEcC
Confidence            579999999999999999998753     6788999998643  23345677899998888     67899999999999


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcC--------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNN--------------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPE  228 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~--------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~  228 (433)
                      ...+++||||+ +++|.+++....                    ...+++..+..++.||+.||.|||++|++||||||+
T Consensus        80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~  159 (288)
T cd05050          80 GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATR  159 (288)
T ss_pred             CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHh
Confidence            99999999999 889999997432                    124788899999999999999999999999999999


Q ss_pred             ceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhCCCCCCc
Q 013973          229 NVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYP  303 (433)
Q Consensus       229 NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~  303 (433)
                      |||++.++.                           ++|+|||.+......     .....++..|+|||.+.+..++.+
T Consensus       160 nil~~~~~~---------------------------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  212 (288)
T cd05050         160 NCLVGENMV---------------------------VKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTE  212 (288)
T ss_pred             heEecCCCc---------------------------eEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCch
Confidence            999965554                           455555544322111     111234667999999999899999


Q ss_pred             chhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccch
Q 013973          304 CDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP  382 (433)
Q Consensus       304 ~DvwSlGv~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  382 (433)
                      +|||||||++|||++ |..||.+....+....+.                       .+...                  
T Consensus       213 ~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~-----------------------~~~~~------------------  251 (288)
T cd05050         213 SDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVR-----------------------DGNVL------------------  251 (288)
T ss_pred             hHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh-----------------------cCCCC------------------
Confidence            999999999999998 888997655544332211                       11000                  


Q ss_pred             hHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhc
Q 013973          383 RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       383 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                             ..+..++.++.+||.+||+.||++|||+.|+++
T Consensus       252 -------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         252 -------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             -------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence                   011245678999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-40  Score=326.23  Aligned_cols=203  Identities=27%  Similarity=0.410  Sum_probs=176.9

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeec--chhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC---
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN---  171 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~---  171 (433)
                      ..+...+.||+|+||.||+++++.+|+.||||.++.  .....+.+.+|+++|+++     +|+|||+++++-++..   
T Consensus        13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKL-----nh~NIVk~f~iee~~~~~~   87 (732)
T KOG4250|consen   13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKL-----NHPNIVKLFDIEETKFLGL   87 (732)
T ss_pred             cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHc-----CchhhhhhcccCCccccCc
Confidence            347788999999999999999999999999999874  345678889999999999     6899999999876543   


Q ss_pred             ---eEEEEEecC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCC
Q 013973          172 ---HICIVFEKL-GSSLYDFLRKNN-YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  246 (433)
Q Consensus       172 ---~~~lV~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~  246 (433)
                         ...+||||| ||+|...|++.. ...|++.+.+.++.++..||.|||++|||||||||.||++-..+          
T Consensus        88 ~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Ge----------  157 (732)
T KOG4250|consen   88 VTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGE----------  157 (732)
T ss_pred             ccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecC----------
Confidence               578999999 999999998643 35799999999999999999999999999999999999994322          


Q ss_pred             CCCCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhh-CCCCCCcchhHHHHHHHHHHHhCCCCC
Q 013973          247 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALF  323 (433)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGv~l~elltg~~Pf  323 (433)
                                   +.....||+|||.|+...++.  .+++||..|.+||++. .+.|+..+|.|||||++|+++||..||
T Consensus       158 -------------dgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF  224 (732)
T KOG4250|consen  158 -------------DGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPF  224 (732)
T ss_pred             -------------CCceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCC
Confidence                         455678999999999776665  4579999999999999 488999999999999999999999999


Q ss_pred             CCCC
Q 013973          324 QTHE  327 (433)
Q Consensus       324 ~~~~  327 (433)
                      ....
T Consensus       225 ~p~~  228 (732)
T KOG4250|consen  225 IPFG  228 (732)
T ss_pred             CcCC
Confidence            6543

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=9.3e-39  Score=303.28  Aligned_cols=258  Identities=24%  Similarity=0.306  Sum_probs=187.6

Q ss_pred             CcE-EEEeeeeccccEEEEEEE----ECCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           97 SRY-KIHSKMGEGTFGQVLECW----DRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        97 ~~~-~~~~~iG~G~~g~V~~~~----~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      ++| ++++.||+|+||+||++.    ...+++.||+|+++...  .....+..|+++++.+     .|++++++++++..
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~   77 (283)
T cd05080           3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTL-----YHENIVKYKGCCSE   77 (283)
T ss_pred             hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEec
Confidence            445 999999999999998864    34567889999987432  2455677899999888     67889999988754


Q ss_pred             --CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCC
Q 013973          170 --RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  246 (433)
Q Consensus       170 --~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~  246 (433)
                        ...+++||||+ +++|.+++...   .+++..+..++.|++.||+|||++||+||||||+|||+++++          
T Consensus        78 ~~~~~~~lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~----------  144 (283)
T cd05080          78 QGGKGLQLIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDR----------  144 (283)
T ss_pred             CCCceEEEEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCC----------
Confidence              34689999999 89999999764   599999999999999999999999999999999999996544          


Q ss_pred             CCCCCCCcccccCCCCCCEEEEecCCccccCCCC------CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCC
Q 013973          247 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE  320 (433)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~  320 (433)
                                       .++|+|||++.......      ....++..|+|||++.+..++.++||||||+++|||++|.
T Consensus       145 -----------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~  207 (283)
T cd05080         145 -----------------LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHC  207 (283)
T ss_pred             -----------------cEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCC
Confidence                             45555555554332211      1123566799999999888999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHH
Q 013973          321 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  400 (433)
Q Consensus       321 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (433)
                      .||....... ...+....+......       ....+..+                         .....+...+.++.
T Consensus       208 ~p~~~~~~~~-~~~~~~~~~~~~~~~-------~~~~~~~~-------------------------~~~~~~~~~~~~~~  254 (283)
T cd05080         208 DSKQSPPKKF-EEMIGPKQGQMTVVR-------LIELLERG-------------------------MRLPCPKNCPQEVY  254 (283)
T ss_pred             CCCCCCcchh-hhhhcccccccchhh-------hhhhhhcC-------------------------CCCCCCCCCCHHHH
Confidence            9986533210 000000000000000       00000000                         00011235677899


Q ss_pred             HHHHhccccCCCCCCCHHHHhc
Q 013973          401 HLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       401 ~li~~~L~~dP~~R~ta~ell~  422 (433)
                      +++.+||+.||++|||++++++
T Consensus       255 ~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         255 ILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             HHHHHHhccChhhCCCHHHHHH
Confidence            9999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=1.4e-38  Score=300.65  Aligned_cols=252  Identities=20%  Similarity=0.300  Sum_probs=194.8

Q ss_pred             CcEEEEeeeeccccEEEEEEEECC-----CCeEEEEEEeecchh--hHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRE-----RKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      ++|++++.||+|+||.||+|+.+.     +.+.||+|.+.....  ....+..|+.+++++     .|++++++++++.+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~   79 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKL-----SHKNVVRLLGLCRE   79 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhc-----CCcceeeeEEEECC
Confidence            569999999999999999999754     346799998864322  345678899999988     56889999999999


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcCC-------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNNY-------RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVP  241 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~~-------~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~  241 (433)
                      ....|+||||+ +++|.+++.....       ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.++++
T Consensus        80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~  159 (275)
T cd05046          80 AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVS  159 (275)
T ss_pred             CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEc
Confidence            99999999999 8999999986542       158999999999999999999999999999999999999766655555


Q ss_pred             CCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CC
Q 013973          242 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GE  320 (433)
Q Consensus       242 dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~  320 (433)
                      |||++.......                       ........++..|+|||.+.+..++.++||||||+++|+|++ |.
T Consensus       160 ~~~~~~~~~~~~-----------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~  216 (275)
T cd05046         160 LLSLSKDVYNSE-----------------------YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGE  216 (275)
T ss_pred             ccccccccCccc-----------------------ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCC
Confidence            555433211000                       001122356778999999988889999999999999999999 88


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHH
Q 013973          321 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  400 (433)
Q Consensus       321 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (433)
                      .||...........+                       ..+...|+                        .+..++..+.
T Consensus       217 ~p~~~~~~~~~~~~~-----------------------~~~~~~~~------------------------~~~~~~~~l~  249 (275)
T cd05046         217 LPFYGLSDEEVLNRL-----------------------QAGKLELP------------------------VPEGCPSRLY  249 (275)
T ss_pred             CCccccchHHHHHHH-----------------------HcCCcCCC------------------------CCCCCCHHHH
Confidence            999765544333221                       11111111                        1235667899


Q ss_pred             HHHHhccccCCCCCCCHHHHhcC
Q 013973          401 HLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       401 ~li~~~L~~dP~~R~ta~ell~h  423 (433)
                      +++.+||+.||++|||+.|++.+
T Consensus       250 ~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         250 KLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             HHHHHHcCCCcccCCCHHHHHHH
Confidence            99999999999999999999864

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-39  Score=327.08  Aligned_cols=259  Identities=24%  Similarity=0.408  Sum_probs=214.3

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec-----C
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY-----R  170 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~-----~  170 (433)
                      ++.|++.+.||.|.+|.||+++++.+++.+|+||+.......++.+.|..+|+...    +|||++.++++|-.     +
T Consensus        18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~----~hpnv~~fyg~~~k~~~~~~   93 (953)
T KOG0587|consen   18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYS----HHPNVATFYGAFIKKDPGNG   93 (953)
T ss_pred             CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhcc----CCCCcceEEEEEEEecCCCC
Confidence            35699999999999999999999999999999999877777777888888887763    66889999998853     5


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      +.++|||||| ||+..|++......++.|+.+..|+.+++.||.|||++.++|||||-.|||++                
T Consensus        94 DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT----------------  157 (953)
T KOG0587|consen   94 DQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLT----------------  157 (953)
T ss_pred             CeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEe----------------
Confidence            7899999999 99999999877778899999999999999999999999999999999999994                


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCC-----CCCCcchhHHHHHHHHHHHhCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGL-----GWTYPCDIWSVGCILVELCTGEA  321 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwSlGv~l~elltg~~  321 (433)
                                 .++.|||+|||.+......   ..+.+||+.|||||++...     .|+..+|+||||++..||..|.+
T Consensus       158 -----------~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~P  226 (953)
T KOG0587|consen  158 -----------ENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAP  226 (953)
T ss_pred             -----------ccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCC
Confidence                       5567888888877654432   3557899999999999753     47889999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       322 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      |+-+......+-.|   ...+|+.                                           ...+...+.++.+
T Consensus       227 Pl~DmHPmraLF~I---pRNPPPk-------------------------------------------Lkrp~kWs~~Fnd  260 (953)
T KOG0587|consen  227 PLCDMHPMRALFLI---PRNPPPK-------------------------------------------LKRPKKWSKKFND  260 (953)
T ss_pred             CccCcchhhhhccC---CCCCCcc-------------------------------------------ccchhhHHHHHHH
Confidence            99765544332221   1111111                                           1123456778999


Q ss_pred             HHHhccccCCCCCCCHHHHhcCCCCCCCCC
Q 013973          402 LLQGLLRYDPTDRLTAREALRHPFFTRDHL  431 (433)
Q Consensus       402 li~~~L~~dP~~R~ta~ell~hp~f~~~~~  431 (433)
                      ||..||.+|-++||+..++|+|||.++..+
T Consensus       261 FIs~cL~Kd~e~RP~~~~ll~hpFi~e~~~  290 (953)
T KOG0587|consen  261 FISTCLVKDYEQRPSTEELLKHPFITEQPN  290 (953)
T ss_pred             HHHHHHhhccccCcchhhhccCCccccccc
Confidence            999999999999999999999999996543

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=9.2e-39  Score=302.15  Aligned_cols=243  Identities=23%  Similarity=0.318  Sum_probs=183.5

Q ss_pred             eeeccccEEEEEEEECCC------------------------CeEEEEEEeecchh-hHHHHHHHHHHHHHHHhcCCCCC
Q 013973          104 KMGEGTFGQVLECWDRER------------------------KEMVAIKIVRGIKK-YREAAMIEIEVLQQLAKHDKGGN  158 (433)
Q Consensus       104 ~iG~G~~g~V~~~~~~~~------------------------~~~vAiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~  158 (433)
                      .||+|+||.||+|....+                        ...||+|++..... ....+..|+.+++.+     .|+
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l-----~h~   76 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQV-----SHI   76 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcC-----CCC
Confidence            699999999999975321                        23589998864322 233455666676666     679


Q ss_pred             ceEEecceeecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCc
Q 013973          159 RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEY  237 (433)
Q Consensus       159 ~i~~~~~~~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~  237 (433)
                      ||+++++++......++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++..+.
T Consensus        77 niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~  155 (274)
T cd05076          77 HLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEK-GRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGL  155 (274)
T ss_pred             CeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCc
Confidence            9999999999999999999999 889988887543 46899999999999999999999999999999999999975432


Q ss_pred             cccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHH
Q 013973          238 IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVEL  316 (433)
Q Consensus       238 ~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el  316 (433)
                      ..                    .....+|++|||.+...... ....++..|+|||.+.+ ..++.++|+|||||++|||
T Consensus       156 ~~--------------------~~~~~~kl~d~g~~~~~~~~-~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el  214 (274)
T cd05076         156 AE--------------------GTSPFIKLSDPGVSFTALSR-EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEI  214 (274)
T ss_pred             cc--------------------CccceeeecCCccccccccc-cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHH
Confidence            11                    12345789999977543222 22357888999999875 5689999999999999998


Q ss_pred             H-hCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCc
Q 013973          317 C-TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS  395 (433)
Q Consensus       317 l-tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (433)
                      + +|..||......+....+..                        ..                          ..+...
T Consensus       215 ~~~g~~p~~~~~~~~~~~~~~~------------------------~~--------------------------~~~~~~  244 (274)
T cd05076         215 CFDGEVPLKERTPSEKERFYEK------------------------KH--------------------------RLPEPS  244 (274)
T ss_pred             HhCCCCCccccChHHHHHHHHh------------------------cc--------------------------CCCCCC
Confidence            5 69999976544332111000                        00                          011123


Q ss_pred             hhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          396 AGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       396 ~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                      +.++.++|.+||+.||++|||+.++|++
T Consensus       245 ~~~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         245 CKELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             ChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence            4578999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=1.5e-38  Score=309.36  Aligned_cols=249  Identities=20%  Similarity=0.310  Sum_probs=191.4

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECC-------CCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecce
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRE-------RKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  166 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~-------~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~  166 (433)
                      ..+|++.+.||+|+||.||+|.+..       .+..||+|+++..  ......+..|+.+++++.    .|+||+++++.
T Consensus        11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~----~h~~iv~~~~~   86 (334)
T cd05100          11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIG----KHKNIINLLGA   86 (334)
T ss_pred             HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhc----CCCCeeeeeEE
Confidence            3579999999999999999998643       2346999988642  233456778888888773    35789999999


Q ss_pred             eecCCeEEEEEecC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceE
Q 013973          167 FDYRNHICIVFEKL-GSSLYDFLRKNN--------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVL  231 (433)
Q Consensus       167 ~~~~~~~~lV~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NIL  231 (433)
                      +...+.+++||||+ +++|.+++....              ...+++..+..++.||+.||.|||++||+||||||+|||
T Consensus        87 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nil  166 (334)
T cd05100          87 CTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVL  166 (334)
T ss_pred             EccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEE
Confidence            99999999999999 889999997532              134788899999999999999999999999999999999


Q ss_pred             eeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchh
Q 013973          232 LVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDI  306 (433)
Q Consensus       232 l~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Dv  306 (433)
                      ++.++.+                           ||+|||.++......     ....++..|+|||++.+..++.++||
T Consensus       167 l~~~~~~---------------------------kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  219 (334)
T cd05100         167 VTEDNVM---------------------------KIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV  219 (334)
T ss_pred             EcCCCcE---------------------------EECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhh
Confidence            9655554                           555555443222111     11134567999999999999999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHH
Q 013973          307 WSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ  385 (433)
Q Consensus       307 wSlGv~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (433)
                      |||||++|||++ |..||.+.+..+....+...                      ...                      
T Consensus       220 ~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~----------------------~~~----------------------  255 (334)
T cd05100         220 WSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEG----------------------HRM----------------------  255 (334)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC----------------------CCC----------------------
Confidence            999999999998 89999876654443322110                      000                      


Q ss_pred             HHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          386 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       386 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                          ..+...+.++.+|+.+||+.+|++|||+.|++++
T Consensus       256 ----~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~  289 (334)
T cd05100         256 ----DKPANCTHELYMIMRECWHAVPSQRPTFKQLVED  289 (334)
T ss_pred             ----CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence                0122456689999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.1e-38  Score=295.19  Aligned_cols=238  Identities=24%  Similarity=0.367  Sum_probs=187.5

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecC
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  180 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~  180 (433)
                      ++||+|+||.||+|.+.. ++.||+|++....  .....+..|+.+++++     .|++++++++++......++||||+
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~~v~e~~   74 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQY-----DHPNIVKLIGVCVQKQPIYIVMELV   74 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhC-----CCCCeEEEEEEEecCCCeEEEEEcC
Confidence            479999999999999887 8999999886432  2445677888888887     6788999999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccC
Q 013973          181 -GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM  259 (433)
Q Consensus       181 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~  259 (433)
                       +++|.+++.... ..+++..+..++.|++.||.|||+++|+||||||+|||++.++                       
T Consensus        75 ~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~-----------------------  130 (251)
T cd05041          75 PGGSLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENN-----------------------  130 (251)
T ss_pred             CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCC-----------------------
Confidence             899999997653 3688999999999999999999999999999999999996544                       


Q ss_pred             CCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 013973          260 PKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLA  333 (433)
Q Consensus       260 ~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~~~~  333 (433)
                          .++|+|||.+.......     ....++..|+|||.+.+..++.++|+|||||++|+|++ |..||..........
T Consensus       131 ----~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~  206 (251)
T cd05041         131 ----VLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRE  206 (251)
T ss_pred             ----cEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHH
Confidence                45555555554322111     11123567999999998889999999999999999999 889997665433222


Q ss_pred             HHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCC
Q 013973          334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  413 (433)
Q Consensus       334 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  413 (433)
                      .+....                      ..                          ..++..+.++.+++.+||+.||++
T Consensus       207 ~~~~~~----------------------~~--------------------------~~~~~~~~~~~~li~~~l~~~p~~  238 (251)
T cd05041         207 RIESGY----------------------RM--------------------------PAPQLCPEEIYRLMLQCWAYDPEN  238 (251)
T ss_pred             HHhcCC----------------------CC--------------------------CCCccCCHHHHHHHHHHhccChhh
Confidence            211100                      00                          012345678999999999999999


Q ss_pred             CCCHHHHhc
Q 013973          414 RLTAREALR  422 (433)
Q Consensus       414 R~ta~ell~  422 (433)
                      |||+.|+++
T Consensus       239 Rp~~~ell~  247 (251)
T cd05041         239 RPSFSEIYN  247 (251)
T ss_pred             CcCHHHHHH
Confidence            999999986

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7e-41  Score=296.25  Aligned_cols=286  Identities=28%  Similarity=0.467  Sum_probs=227.0

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC----
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR----  170 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~----  170 (433)
                      +.+-.+.||.|+||+||.+.+..+|+.||+|.+....   ...+.+.+|+..|.-.     .|.|++...++.+..    
T Consensus        54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfF-----kHdNVLSaLDILQPph~df  128 (449)
T KOG0664|consen   54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSF-----RHDNVLSLLDILQPANPSF  128 (449)
T ss_pred             cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhh-----ccccHHHHHHhcCCCCchH
Confidence            3455689999999999999999999999999886332   2234556677777666     446677777666543    


Q ss_pred             -CeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 -NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 -~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                       ..+|+|+|.|..+|...+.+..  .|+.+.+.-+++||++||+|||+.+|.||||||.|+|+++               
T Consensus       129 FqEiYV~TELmQSDLHKIIVSPQ--~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNS---------------  191 (449)
T KOG0664|consen  129 FQELYVLTELMQSDLHKIIVSPQ--ALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNS---------------  191 (449)
T ss_pred             HHHHHHHHHHHHhhhhheeccCC--CCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEecc---------------
Confidence             3578899999889998887654  7999999999999999999999999999999999999954               


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCCCc----eeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY----IVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~----~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                                  +..+||||||+++....+...    -+-|-.|.|||++.+. .|+.++||||.||++.||+..+..|+
T Consensus       192 ------------NCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQ  259 (449)
T KOG0664|consen  192 ------------NCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQ  259 (449)
T ss_pred             ------------CceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhh
Confidence                        556777777777765544322    3568899999999986 49999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHH
Q 013973          325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  404 (433)
Q Consensus       325 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  404 (433)
                      ..+..+++..|..++|.+..+-.....+.++..+-++...-|+...       .+.        ...++.-..+..+++.
T Consensus       260 Aq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~v-------LYt--------lsS~~~~~heav~~~~  324 (449)
T KOG0664|consen  260 AAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQR-------LYK--------IASPDDKNHEAVDLLQ  324 (449)
T ss_pred             ccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccc-------eee--------ecCCcccchHHHHHHH
Confidence            9999999999999999999888888877777777665544333110       000        0112234456788999


Q ss_pred             hccccCCCCCCCHHHHhcCCCCCCCCCC
Q 013973          405 GLLRYDPTDRLTAREALRHPFFTRDHLR  432 (433)
Q Consensus       405 ~~L~~dP~~R~ta~ell~hp~f~~~~~~  432 (433)
                      ++|..||++|.+.++++.|++..+..+|
T Consensus       325 ~~l~~d~dkris~~~A~~~~~~~e~R~r  352 (449)
T KOG0664|consen  325 KLLHFDPDKRISVEEALQHRYLEEGRLR  352 (449)
T ss_pred             HHhCCCCcccccHhhhccccccccccee
Confidence            9999999999999999999998766543

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=1.4e-38  Score=302.35  Aligned_cols=266  Identities=22%  Similarity=0.335  Sum_probs=190.8

Q ss_pred             cEEEEeeeeccccEEEEEEEE----CCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC-
Q 013973           98 RYKIHSKMGEGTFGQVLECWD----RERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR-  170 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~----~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~-  170 (433)
                      .|++++.||+|+||.||+|..    ..++..||+|.++..  ......+..|+.+++.+     .|++++++.+++... 
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~   79 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-----YHENIVKYKGICTEDG   79 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhC-----CCCCeeeeeeEEecCC
Confidence            479999999999999999974    457888999998633  23345677899999888     678899999988764 


Q ss_pred             -CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          171 -NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       171 -~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                       ...++||||+ |++|.+++.+.. ..+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++..
T Consensus        80 ~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~  158 (284)
T cd05079          80 GNGIKLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKA  158 (284)
T ss_pred             CCceEEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccc
Confidence             6789999999 999999997653 3589999999999999999999999999999999999997666555555554433


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                      .......         .            .......|+..|+|||++.+..++.++|||||||++|||+++..|+.....
T Consensus       159 ~~~~~~~---------~------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~  217 (284)
T cd05079         159 IETDKEY---------Y------------TVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMT  217 (284)
T ss_pred             cccCccc---------e------------eecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccc
Confidence            2111000         0            000123467789999999988899999999999999999998876543211


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                           ......++.+.+....   .....+..+.                         ..+.+..++.++.+|+.+||+
T Consensus       218 -----~~~~~~~~~~~~~~~~---~~~~~~~~~~-------------------------~~~~~~~~~~~~~~li~~~l~  264 (284)
T cd05079         218 -----LFLKMIGPTHGQMTVT---RLVRVLEEGK-------------------------RLPRPPNCPEEVYQLMRKCWE  264 (284)
T ss_pred             -----hhhhhcccccccccHH---HHHHHHHcCc-------------------------cCCCCCCCCHHHHHHHHHHcc
Confidence                 1111112211110000   0000011110                         001123567789999999999


Q ss_pred             cCCCCCCCHHHHhcC
Q 013973          409 YDPTDRLTAREALRH  423 (433)
Q Consensus       409 ~dP~~R~ta~ell~h  423 (433)
                      .||++|||+.+++++
T Consensus       265 ~~p~~Rpt~~~il~~  279 (284)
T cd05079         265 FQPSKRTTFQNLIEG  279 (284)
T ss_pred             CCcccCcCHHHHHHH
Confidence            999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=2.1e-38  Score=302.78  Aligned_cols=257  Identities=16%  Similarity=0.245  Sum_probs=179.9

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCC---CeEEEEEEeecchhh--HHH-------HHHHHHHHHHHHhcCCCCCceE
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRER---KEMVAIKIVRGIKKY--REA-------AMIEIEVLQQLAKHDKGGNRCV  161 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~---~~~vAiK~~~~~~~~--~~~-------~~~E~~~l~~l~~~~~~~~~i~  161 (433)
                      ...++|++.+.||+|+||.||+|.+..+   +..+|+|+.......  .+.       ...++..+..+  ....|++++
T Consensus         9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~--~~~~h~~i~   86 (294)
T PHA02882          9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNI--HNIDHLGIP   86 (294)
T ss_pred             cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHh--ccCCCCCCC
Confidence            3446899999999999999999998887   677888865321111  000       00111222222  223667888


Q ss_pred             EecceeecCC----eEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCc
Q 013973          162 QIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEY  237 (433)
Q Consensus       162 ~~~~~~~~~~----~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~  237 (433)
                      .+++......    ..+++++++..++.+.+....  .+++..+..++.|++.||+|||+.+|+||||||+|||++.+  
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~--  162 (294)
T PHA02882         87 KYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRIK--CKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGN--  162 (294)
T ss_pred             cEEEeeeEecCCceEEEEEEehhccCHHHHHHhhc--cCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC--
Confidence            8887654332    457889988778887776543  46888899999999999999999999999999999999544  


Q ss_pred             cccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCC----------CCCceeecCcccchhhhhCCCCCCcchhH
Q 013973          238 IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP----------DQNYIVSTRHYRAPEVILGLGWTYPCDIW  307 (433)
Q Consensus       238 ~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvw  307 (433)
                                               +.++|+|||+++....          ......||+.|+|||++.+..++.++|||
T Consensus       163 -------------------------~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~Diw  217 (294)
T PHA02882        163 -------------------------NRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLE  217 (294)
T ss_pred             -------------------------CcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHH
Confidence                                     4566666666543221          11224699999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHH
Q 013973          308 SVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL  387 (433)
Q Consensus       308 SlGv~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (433)
                      ||||++|||++|..||.+.+...........      ++...        +..+..                        
T Consensus       218 SlG~~l~el~~g~~P~~~~~~~~~~~~~~~~------~~~~~--------~~~~~~------------------------  259 (294)
T PHA02882        218 SLGYCMLKWAGIKLPWKGFGHNGNLIHAAKC------DFIKR--------LHEGKI------------------------  259 (294)
T ss_pred             HHHHHHHHHHhCCCCCCccccchHHHHHhHH------HHHHH--------hhhhhh------------------------
Confidence            9999999999999999876432221111100      00000        001100                        


Q ss_pred             HhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhc
Q 013973          388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       388 ~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                         .....+.++.+++..||+.+|++||+..++++
T Consensus       260 ---~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        260 ---KIKNANKFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             ---ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence               11244678999999999999999999999875

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=1.6e-38  Score=299.75  Aligned_cols=241  Identities=22%  Similarity=0.286  Sum_probs=184.0

Q ss_pred             eeeeccccEEEEEEEECCCCe--EEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEe
Q 013973          103 SKMGEGTFGQVLECWDRERKE--MVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  178 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~--~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e  178 (433)
                      +.||+|+||.||+|.+..++.  .+|+|.++..  ......+..|++++.++.    +|++++++++.+...+.+++|||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~----~h~~iv~~~~~~~~~~~~~lv~e   76 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG----HHPNIINLLGACEHRGYLYLAIE   76 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhc----cCCCeeeEEEEEecCCCceEEEE
Confidence            368999999999999988775  4688887632  334456778899888874    45789999999999999999999


Q ss_pred             cC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCC
Q 013973          179 KL-GSSLYDFLRKNN--------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY  243 (433)
Q Consensus       179 ~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~df  243 (433)
                      |+ +++|.+++....              ...+++..+..++.|++.||+|||+.||+||||||+|||++.++.+     
T Consensus        77 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~-----  151 (270)
T cd05047          77 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVA-----  151 (270)
T ss_pred             eCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeE-----
Confidence            99 899999997542              1247899999999999999999999999999999999999655554     


Q ss_pred             cCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC--CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CC
Q 013973          244 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GE  320 (433)
Q Consensus       244 g~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~  320 (433)
                                            ||+|||++......  ......+..|+|||++.+..++.++|+|||||++|||++ |.
T Consensus       152 ----------------------kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~  209 (270)
T cd05047         152 ----------------------KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGG  209 (270)
T ss_pred             ----------------------EECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCC
Confidence                                  55555544311110  011123567999999998889999999999999999997 99


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHH
Q 013973          321 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  400 (433)
Q Consensus       321 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (433)
                      .||.+.+..+....+...                      ...                          ..+...+.++.
T Consensus       210 ~pf~~~~~~~~~~~~~~~----------------------~~~--------------------------~~~~~~~~~~~  241 (270)
T cd05047         210 TPYCGMTCAELYEKLPQG----------------------YRL--------------------------EKPLNCDDEVY  241 (270)
T ss_pred             CCccccCHHHHHHHHhCC----------------------CCC--------------------------CCCCcCCHHHH
Confidence            999765543333221100                      000                          01123456789


Q ss_pred             HHHHhccccCCCCCCCHHHHhc
Q 013973          401 HLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       401 ~li~~~L~~dP~~R~ta~ell~  422 (433)
                      +|+.+||+.||.+|||+.+++.
T Consensus       242 ~li~~~l~~~p~~Rps~~~il~  263 (270)
T cd05047         242 DLMRQCWREKPYERPSFAQILV  263 (270)
T ss_pred             HHHHHHcccChhhCCCHHHHHH
Confidence            9999999999999999999975

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.1e-38  Score=299.07  Aligned_cols=244  Identities=22%  Similarity=0.292  Sum_probs=189.8

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCe----EEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKE----MVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~----~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      .+|++.+.||+|+||.||+|.++.+++    .||+|.+....  .....+..|+.+++.+     .|+|++++++++.. 
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~-   80 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASV-----DHPHVVRLLGICLS-   80 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhC-----CCCCcceEEEEEec-
Confidence            569999999999999999999876654    58999886432  2345567788888887     67889999998877 


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      ...++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||+++++.+           
T Consensus        81 ~~~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~-----------  148 (279)
T cd05057          81 SQVQLITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHV-----------  148 (279)
T ss_pred             CceEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeE-----------
Confidence            7899999999 899999998653 358999999999999999999999999999999999999655554           


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCCCc-----eeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY-----IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALF  323 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~-----~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf  323 (433)
                                      ||+|||.+.........     ..++..|+|||.+....++.++|+|||||++||+++ |..||
T Consensus       149 ----------------kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~  212 (279)
T cd05057         149 ----------------KITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPY  212 (279)
T ss_pred             ----------------EECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCC
Confidence                            55555544432211110     123567999999988889999999999999999998 99999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      .+....+....+...                      ...                          ..+...+.++.+++
T Consensus       213 ~~~~~~~~~~~~~~~----------------------~~~--------------------------~~~~~~~~~~~~~~  244 (279)
T cd05057         213 EGIPAVEIPDLLEKG----------------------ERL--------------------------PQPPICTIDVYMVL  244 (279)
T ss_pred             CCCCHHHHHHHHhCC----------------------CCC--------------------------CCCCCCCHHHHHHH
Confidence            876554433222110                      000                          01123456789999


Q ss_pred             HhccccCCCCCCCHHHHhc
Q 013973          404 QGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~  422 (433)
                      .+||..||.+||++.++++
T Consensus       245 ~~~l~~~p~~Rp~~~~l~~  263 (279)
T cd05057         245 VKCWMIDAESRPTFKELIN  263 (279)
T ss_pred             HHHcCCChhhCCCHHHHHH
Confidence            9999999999999998764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.4e-39  Score=334.10  Aligned_cols=247  Identities=22%  Similarity=0.349  Sum_probs=206.7

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCC-----eEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERK-----EMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~-----~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      ..+..+.+.||+|+||.||.|....-.     ..||||.++..  ......+..|..+|+.+     +||||+++++++-
T Consensus       691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f-----~HpNiv~liGv~l  765 (1025)
T KOG1095|consen  691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKF-----DHPNIVSLIGVCL  765 (1025)
T ss_pred             hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcC-----CCcceeeEEEeec
Confidence            456788999999999999999876433     34999998754  55677888999999988     8899999999999


Q ss_pred             cCCeEEEEEecC-CCCHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCC
Q 013973          169 YRNHICIVFEKL-GSSLYDFLRKNN-----YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPD  242 (433)
Q Consensus       169 ~~~~~~lV~e~~-~~~L~~~l~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~d  242 (433)
                      +....+|++||| ||+|..||++..     ...|+..+...++.||++|++||++++.|||||..+|+|++         
T Consensus       766 ~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~---------  836 (1025)
T KOG1095|consen  766 DSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLD---------  836 (1025)
T ss_pred             CCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeec---------
Confidence            999999999999 999999999762     24689999999999999999999999999999999999994         


Q ss_pred             CcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCce-----eecCcccchhhhhCCCCCCcchhHHHHHHHHHHH
Q 013973          243 YKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI-----VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC  317 (433)
Q Consensus       243 fg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~-----~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ell  317 (433)
                                        +...+||+|||+|+.......+.     .-...|||||.+....++.++|||||||++||++
T Consensus       837 ------------------~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEif  898 (1025)
T KOG1095|consen  837 ------------------ERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIF  898 (1025)
T ss_pred             ------------------ccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHH
Confidence                              45667788888877444433222     1245799999999999999999999999999999


Q ss_pred             h-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCch
Q 013973          318 T-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA  396 (433)
Q Consensus       318 t-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (433)
                      | |..||.+.++.+.+...                      .+.|+++.|                          ..++
T Consensus       899 slG~~PY~~~~n~~v~~~~----------------------~~ggRL~~P--------------------------~~CP  930 (1025)
T KOG1095|consen  899 SLGATPYPSRSNFEVLLDV----------------------LEGGRLDPP--------------------------SYCP  930 (1025)
T ss_pred             hCCCCCCCCcchHHHHHHH----------------------HhCCccCCC--------------------------CCCC
Confidence            9 89999998887766532                      234444433                          4678


Q ss_pred             hHHHHHHHhccccCCCCCCCHHHHhc
Q 013973          397 GDLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       397 ~~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                      ..+.++|..||+.+|++||+...+++
T Consensus       931 ~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  931 EKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             hHHHHHHHHHccCChhhCccHHHHHh
Confidence            88999999999999999999999886

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=2.8e-38  Score=299.46  Aligned_cols=247  Identities=18%  Similarity=0.266  Sum_probs=190.9

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECC----CCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRE----RKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~----~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      .++|++.+.||+|+||.||+|.+..    ++..||+|++...  ......+..|+.+++.+     .|+|++++++++..
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l-----~h~ni~~~~~~~~~   79 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGL-----SHQNILPILHVCIE   79 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEec
Confidence            3679999999999999999999876    3578999988643  23345567788888887     67889999987654


Q ss_pred             -CCeEEEEEecC-CCCHHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccC
Q 013973          170 -RNHICIVFEKL-GSSLYDFLRKNNY------RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVP  241 (433)
Q Consensus       170 -~~~~~lV~e~~-~~~L~~~l~~~~~------~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~  241 (433)
                       ....++++||+ +++|.+++.....      ..+++..+..++.||+.||+|||+++|+||||||+|||+++++.++++
T Consensus        80 ~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~  159 (280)
T cd05043          80 DGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKIT  159 (280)
T ss_pred             CCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEEC
Confidence             57889999999 8999999976432      358999999999999999999999999999999999999665555555


Q ss_pred             CCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHH
Q 013973          242 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL  316 (433)
Q Consensus       242 dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el  316 (433)
                      |||                           +++......     ....++..|+|||++.+..++.++|||||||++||+
T Consensus       160 d~g---------------------------~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el  212 (280)
T cd05043         160 DNA---------------------------LSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWEL  212 (280)
T ss_pred             CCC---------------------------CcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHH
Confidence            554                           443221111     112356789999999998999999999999999999


Q ss_pred             Hh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCc
Q 013973          317 CT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS  395 (433)
Q Consensus       317 lt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (433)
                      ++ |..||...+..+....+..                       + ..+                        ..+..+
T Consensus       213 ~~~g~~p~~~~~~~~~~~~~~~-----------------------~-~~~------------------------~~~~~~  244 (280)
T cd05043         213 MTLGQTPYVEIDPFEMAAYLKD-----------------------G-YRL------------------------AQPINC  244 (280)
T ss_pred             hcCCCCCcCcCCHHHHHHHHHc-----------------------C-CCC------------------------CCCCcC
Confidence            99 9999987655443322111                       0 000                        011234


Q ss_pred             hhHHHHHHHhccccCCCCCCCHHHHhc
Q 013973          396 AGDLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       396 ~~~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                      +.++.+++.+||+.||++|||+.++++
T Consensus       245 ~~~~~~li~~~l~~~p~~Rps~~~~~~  271 (280)
T cd05043         245 PDELFAVMACCWALDPEERPSFSQLVQ  271 (280)
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            668899999999999999999999975

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=1.4e-38  Score=299.46  Aligned_cols=245  Identities=22%  Similarity=0.348  Sum_probs=190.0

Q ss_pred             eeeeccccEEEEEEEECCCC------eEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973          103 SKMGEGTFGQVLECWDRERK------EMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~------~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      +.||+|+||.||+|.++...      +.+|+|.+....  .....+..|+.+++.+     .|++|+++++++......+
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~   75 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNF-----NHPNIVKLLGVCLLNEPQY   75 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhc-----CCCCeeeEeeeecCCCCeE
Confidence            46899999999999886544      789999876432  3455677888888888     6789999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNN-----YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      +||||+ +++|.+++....     ...+++..+..++.||+.||+|||+.+++|+||||+||+++.++.           
T Consensus        76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~-----------  144 (269)
T cd05044          76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGY-----------  144 (269)
T ss_pred             EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCC-----------
Confidence            999999 899999997532     234788999999999999999999999999999999999976541           


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEAL  322 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P  322 (433)
                                 +....++|+|||++.......     ....++..|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus       145 -----------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p  213 (269)
T cd05044         145 -----------DADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQP  213 (269)
T ss_pred             -----------CCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCC
Confidence                       122356666666654332111     11245678999999999899999999999999999998 9999


Q ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       323 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      |...+..+....+...                      ...                          ..+...+.++.+|
T Consensus       214 ~~~~~~~~~~~~~~~~----------------------~~~--------------------------~~~~~~~~~~~~l  245 (269)
T cd05044         214 YPALNNQEVLQHVTAG----------------------GRL--------------------------QKPENCPDKIYQL  245 (269)
T ss_pred             CcccCHHHHHHHHhcC----------------------Ccc--------------------------CCcccchHHHHHH
Confidence            9876655443322110                      000                          0123456788999


Q ss_pred             HHhccccCCCCCCCHHHHhc
Q 013973          403 LQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       403 i~~~L~~dP~~R~ta~ell~  422 (433)
                      |.+||+.+|.+||++.++++
T Consensus       246 i~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         246 MTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             HHHHcCCCcccCCCHHHHHH
Confidence            99999999999999999875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=5e-38  Score=292.53  Aligned_cols=238  Identities=24%  Similarity=0.348  Sum_probs=185.3

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecC
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  180 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~  180 (433)
                      ++||+|+||.||+|... ++..||+|+++...  .....+..|+.+++.+     .|++++++++++...+..++||||+
T Consensus         1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~   74 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQY-----DHPNIVKLIGVCTQRQPIYIVMELV   74 (250)
T ss_pred             CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhC-----CCCCcCeEEEEEecCCccEEEEECC
Confidence            46899999999999865 57789999886432  2334567788888887     6789999999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccC
Q 013973          181 -GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM  259 (433)
Q Consensus       181 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~  259 (433)
                       +++|.+++.... ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.++                    
T Consensus        75 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~--------------------  133 (250)
T cd05085          75 PGGDFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLK--------------------  133 (250)
T ss_pred             CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEE--------------------
Confidence             899999987643 3689999999999999999999999999999999999996655544                    


Q ss_pred             CCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 013973          260 PKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAM  334 (433)
Q Consensus       260 ~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~~~~~  334 (433)
                             |+|||++.......    ....++..|+|||++.+..++.++|+||||+++|++++ |..||...........
T Consensus       134 -------l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~  206 (250)
T cd05085         134 -------ISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQ  206 (250)
T ss_pred             -------ECCCccceeccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Confidence                   45555443221111    11234567999999998889999999999999999998 9999987654433222


Q ss_pred             HHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCC
Q 013973          335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR  414 (433)
Q Consensus       335 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  414 (433)
                      +....                      .                          ...+..++.++.+|+.+||+.||++|
T Consensus       207 ~~~~~----------------------~--------------------------~~~~~~~~~~~~~li~~~l~~~p~~R  238 (250)
T cd05085         207 VEKGY----------------------R--------------------------MSCPQKCPDDVYKVMQRCWDYKPENR  238 (250)
T ss_pred             HHcCC----------------------C--------------------------CCCCCCCCHHHHHHHHHHcccCcccC
Confidence            11100                      0                          00123456789999999999999999


Q ss_pred             CCHHHHhc
Q 013973          415 LTAREALR  422 (433)
Q Consensus       415 ~ta~ell~  422 (433)
                      |++.|+++
T Consensus       239 p~~~~l~~  246 (250)
T cd05085         239 PKFSELQK  246 (250)
T ss_pred             CCHHHHHH
Confidence            99999976

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=5.4e-38  Score=298.11  Aligned_cols=265  Identities=22%  Similarity=0.323  Sum_probs=188.0

Q ss_pred             CcEEEEeeeeccccEEEEEEE----ECCCCeEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCCceEEecceee--c
Q 013973           97 SRYKIHSKMGEGTFGQVLECW----DRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD--Y  169 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~----~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~--~  169 (433)
                      .+|++++.||+|+||.||+|.    +..+++.||+|.+.... .....+..|+++++.+     .|+|++++.+.+.  .
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~   78 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSL-----QHDNIVKYKGVCYSAG   78 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhC-----CCCCeeEEEEEEccCC
Confidence            469999999999999999997    34578899999986433 3345677899998888     6788999988754  3


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      ...+++||||+ +++|.+++.... ..+++..+..++.|++.||.|||++||+||||||+|||+++++.++|+|||++..
T Consensus        79 ~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~  157 (284)
T cd05081          79 RRNLRLVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKV  157 (284)
T ss_pred             CCceEEEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCccccc
Confidence            45789999999 899999997643 3689999999999999999999999999999999999997666555555555443


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                      .+.....         ..            ......++..|+|||++.+..++.++|+|||||++|||++|..|+.....
T Consensus       158 ~~~~~~~---------~~------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~  216 (284)
T cd05081         158 LPQDKEY---------YK------------VREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPA  216 (284)
T ss_pred             ccCCCcc---------ee------------ecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcch
Confidence            3211100         00            00001234569999999988899999999999999999999877654321


Q ss_pred             HHHHHHHHHHhCCCCH--HHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          329 LEHLAMMERVLGPLPQ--HMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      . ..    ...+....  ......    ...+..+.                         ....+..++.++.+|+.+|
T Consensus       217 ~-~~----~~~~~~~~~~~~~~~~----~~~~~~~~-------------------------~~~~~~~~~~~~~~li~~c  262 (284)
T cd05081         217 E-FM----RMMGNDKQGQMIVYHL----IELLKNNG-------------------------RLPAPPGCPAEIYAIMKEC  262 (284)
T ss_pred             h-hh----hhcccccccccchHHH----HHHHhcCC-------------------------cCCCCCCCCHHHHHHHHHH
Confidence            1 11    10111000  000000    00000000                         0011235677899999999


Q ss_pred             cccCCCCCCCHHHHhc
Q 013973          407 LRYDPTDRLTAREALR  422 (433)
Q Consensus       407 L~~dP~~R~ta~ell~  422 (433)
                      |+.||++|||+.|+++
T Consensus       263 l~~~p~~Rpt~~ei~~  278 (284)
T cd05081         263 WNNDPSQRPSFSELAL  278 (284)
T ss_pred             ccCChhhCCCHHHHHH
Confidence            9999999999999975

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=4.8e-38  Score=296.26  Aligned_cols=245  Identities=24%  Similarity=0.324  Sum_probs=190.2

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCC---CeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRER---KEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~---~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .+|.+.+.||+|+||.||+|.+...   ...||||.....  ....+.+..|+.+++.+     .|+|++++++++.+ .
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~~~~~~~~~-~   79 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQF-----DHPHIVKLIGVITE-N   79 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhC-----CCCchhceeEEEcC-C
Confidence            5689999999999999999987654   346999988643  23455677888888888     66889999998875 5


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      ..++||||+ +++|.+++.... ..+++..+..++.|++.||+|||+.|++|+||||+|||++.++.             
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~-------------  145 (270)
T cd05056          80 PVWIVMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDC-------------  145 (270)
T ss_pred             CcEEEEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCC-------------
Confidence            578999999 899999997654 36899999999999999999999999999999999999965554             


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQT  325 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~  325 (433)
                                    ++|+|||++.......    ....++..|+|||.+....++.++||||||+++|||++ |..||..
T Consensus       146 --------------~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~  211 (270)
T cd05056         146 --------------VKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQG  211 (270)
T ss_pred             --------------eEEccCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCC
Confidence                          5555555544322211    11134567999999988889999999999999999986 9999987


Q ss_pred             CChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHh
Q 013973          326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  405 (433)
Q Consensus       326 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  405 (433)
                      .+..+....+...                      ...                          ..+..++.++.++|.+
T Consensus       212 ~~~~~~~~~~~~~----------------------~~~--------------------------~~~~~~~~~~~~li~~  243 (270)
T cd05056         212 VKNNDVIGRIENG----------------------ERL--------------------------PMPPNCPPTLYSLMTK  243 (270)
T ss_pred             CCHHHHHHHHHcC----------------------CcC--------------------------CCCCCCCHHHHHHHHH
Confidence            6655443322110                      000                          0123456789999999


Q ss_pred             ccccCCCCCCCHHHHhcC
Q 013973          406 LLRYDPTDRLTAREALRH  423 (433)
Q Consensus       406 ~L~~dP~~R~ta~ell~h  423 (433)
                      ||..+|++|||+.+++..
T Consensus       244 ~l~~~P~~Rpt~~~~~~~  261 (270)
T cd05056         244 CWAYDPSKRPRFTELKAQ  261 (270)
T ss_pred             HcCCChhhCcCHHHHHHH
Confidence            999999999999998763

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=3.8e-38  Score=296.81  Aligned_cols=244  Identities=22%  Similarity=0.278  Sum_probs=179.8

Q ss_pred             eeeeccccEEEEEEEECC--CCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEe
Q 013973          103 SKMGEGTFGQVLECWDRE--RKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  178 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~--~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e  178 (433)
                      ++||+|+||.||+|....  ....+|+|.+...  ......+..|+.+++.+     +|+||+++++.+.....+|+|||
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-----~h~nii~~~~~~~~~~~~~lv~e   75 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYREL-----NHPNVLQCLGQCIESIPYLLVLE   75 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhC-----CCCCcceEEEEECCCCceEEEEE
Confidence            368999999999996533  3457899977533  22334566788888776     67899999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          179 KL-GSSLYDFLRKNNY---RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       179 ~~-~~~L~~~l~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      |+ +++|.+++.....   ..+++..+..++.||+.||+|||++||+||||||+|||+++++                  
T Consensus        76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~------------------  137 (269)
T cd05042          76 FCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADL------------------  137 (269)
T ss_pred             eCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCC------------------
Confidence            99 8999999976432   2356788899999999999999999999999999999996554                  


Q ss_pred             ccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhC-------CCCCCcchhHHHHHHHHHHHh-CCC
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILG-------LGWTYPCDIWSVGCILVELCT-GEA  321 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGv~l~ellt-g~~  321 (433)
                               .+||+|||.+......     .....++..|+|||++..       ..++.++|||||||++|||++ |..
T Consensus       138 ---------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~  208 (269)
T cd05042         138 ---------SVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQ  208 (269)
T ss_pred             ---------cEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCC
Confidence                     4555555554322111     112245778999999853       356889999999999999999 789


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       322 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      ||....+.+.+......                      +...++..                     .....++..+.+
T Consensus       209 p~~~~~~~~~~~~~~~~----------------------~~~~~~~~---------------------~~~~~~~~~~~~  245 (269)
T cd05042         209 PYPDLSDEQVLKQVVRE----------------------QDIKLPKP---------------------QLDLKYSDRWYE  245 (269)
T ss_pred             CCCcCCHHHHHHHHhhc----------------------cCccCCCC---------------------cccccCCHHHHH
Confidence            99876655543332111                      11111110                     011245667888


Q ss_pred             HHHhccccCCCCCCCHHHHhc
Q 013973          402 LLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       402 li~~~L~~dP~~R~ta~ell~  422 (433)
                      ++..|+ .||++|||++||++
T Consensus       246 ~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         246 VMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             HHHHHh-cCcccccCHHHHHH
Confidence            999998 59999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=2.1e-38  Score=296.31  Aligned_cols=242  Identities=23%  Similarity=0.306  Sum_probs=186.6

Q ss_pred             eeeeccccEEEEEEEECCCC----------eEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973          103 SKMGEGTFGQVLECWDRERK----------EMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~----------~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      +.||+|+||.||+|.+..++          ..+++|++.........+..|+.+++.+     .|++++++++.+.. ..
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~-~~   74 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQL-----SHKHLVKLYGVCVR-DE   74 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcC-----CCcchhheeeEEec-CC
Confidence            46899999999999998776          4588888765443356677788888877     67889999998877 77


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      .++||||+ +++|.+++..... .+++..+..++.||+.||.|||++||+||||||+|||++.++.-             
T Consensus        75 ~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~-------------  140 (259)
T cd05037          75 NIMVEEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLN-------------  140 (259)
T ss_pred             cEEEEEcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccc-------------
Confidence            89999999 8999999987542 68999999999999999999999999999999999999654410             


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCC--CCCCcchhHHHHHHHHHHHh-CCCCCCCCCh
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL--GWTYPCDIWSVGCILVELCT-GEALFQTHEN  328 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~  328 (433)
                             ......+||+|||.+..... .....++..|+|||++.+.  .++.++|+|||||++|+|++ |..||...+.
T Consensus       141 -------~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~  212 (259)
T cd05037         141 -------EGYVPFIKLSDPGIPITVLS-REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS  212 (259)
T ss_pred             -------cCCceeEEeCCCCccccccc-ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc
Confidence                   01223688888888765433 2234577889999999876  78999999999999999999 5788866542


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      .+......                      ....  .                          +.....++.++|.+||+
T Consensus       213 ~~~~~~~~----------------------~~~~--~--------------------------~~~~~~~~~~li~~~l~  242 (259)
T cd05037         213 SEKERFYQ----------------------DQHR--L--------------------------PMPDCAELANLINQCWT  242 (259)
T ss_pred             hhHHHHHh----------------------cCCC--C--------------------------CCCCchHHHHHHHHHhc
Confidence            22111100                      0000  0                          01112578999999999


Q ss_pred             cCCCCCCCHHHHhc
Q 013973          409 YDPTDRLTAREALR  422 (433)
Q Consensus       409 ~dP~~R~ta~ell~  422 (433)
                      .||.+|||+.++++
T Consensus       243 ~~p~~Rpt~~~il~  256 (259)
T cd05037         243 YDPTKRPSFRAILR  256 (259)
T ss_pred             cChhhCCCHHHHHH
Confidence            99999999999985

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=2.9e-39  Score=334.30  Aligned_cols=272  Identities=24%  Similarity=0.352  Sum_probs=199.2

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec---
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY---  169 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~---  169 (433)
                      ...+|+.++.||+||||.||+|+++-+|+.||||.+.-.  .+......+|+..|.++     +|||||.++..|.+   
T Consensus       477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArL-----nHpNVVRYysAWVEs~~  551 (1351)
T KOG1035|consen  477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARL-----NHPNVVRYYSAWVESTA  551 (1351)
T ss_pred             HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhc-----CCcceeeeehhhhccCC
Confidence            346789999999999999999999999999999998643  55566778899999999     77888887764421   


Q ss_pred             --------------------------------------------------------------------------------
Q 013973          170 --------------------------------------------------------------------------------  169 (433)
Q Consensus       170 --------------------------------------------------------------------------------  169 (433)
                                                                                                      
T Consensus       552 ~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S  631 (1351)
T KOG1035|consen  552 ELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLS  631 (1351)
T ss_pred             ccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccc
Confidence                                                                                            


Q ss_pred             ----------------------------C--------CeEEEEEecC-CCCHHHHHHhcCCCCC-CHHHHHHHHHHHHHH
Q 013973          170 ----------------------------R--------NHICIVFEKL-GSSLYDFLRKNNYRSF-PIDLVREIARQLLEC  211 (433)
Q Consensus       170 ----------------------------~--------~~~~lV~e~~-~~~L~~~l~~~~~~~l-~~~~~~~i~~qi~~~  211 (433)
                                                  +        ..+||-|||| ...|.++++.+.  .. ....+.+++.||+.|
T Consensus       632 ~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~--~~~~~d~~wrLFreIlEG  709 (1351)
T KOG1035|consen  632 NTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNH--FNSQRDEAWRLFREILEG  709 (1351)
T ss_pred             cccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcc--cchhhHHHHHHHHHHHHH
Confidence                                        0        2478999999 555555665543  22 477889999999999


Q ss_pred             HHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCC-CCCceeecCccc
Q 013973          212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP-DQNYIVSTRHYR  290 (433)
Q Consensus       212 L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~  290 (433)
                      |.|+|++|||||||||.||++++++.+||.|||++.......       ........+.+.-...+. ..+..+||.-|+
T Consensus       710 LaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~-------~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYv  782 (1351)
T KOG1035|consen  710 LAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENL-------ESIDQDLSFSTNRAGSNDGDLTSQVGTALYV  782 (1351)
T ss_pred             HHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhh-------hhHhhccCccccccCCCCcccccccceeeee
Confidence            999999999999999999999999999999998876422100       011112222222221222 234568999999


Q ss_pred             chhhhhCCC---CCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCC
Q 013973          291 APEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  367 (433)
Q Consensus       291 aPE~~~~~~---~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  367 (433)
                      |||++.+..   |+.|+|+||||+|++||+   +||.  +.++-...+..                    +++|.++.+.
T Consensus       783 APEll~~~~~~~Yn~KiDmYSLGIVlFEM~---yPF~--TsMERa~iL~~--------------------LR~g~iP~~~  837 (1351)
T KOG1035|consen  783 APELLSDTSSNKYNSKIDMYSLGIVLFEML---YPFG--TSMERASILTN--------------------LRKGSIPEPA  837 (1351)
T ss_pred             cHHHhcccccccccchhhhHHHHHHHHHHh---ccCC--chHHHHHHHHh--------------------cccCCCCCCc
Confidence            999998755   999999999999999997   4575  33333322222                    2233333331


Q ss_pred             CccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCC
Q 013973          368 GAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT  427 (433)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~  427 (433)
                                            .++..--+.-+.+|++||+.||.+||||.|+|++.||.
T Consensus       838 ----------------------~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llp  875 (1351)
T KOG1035|consen  838 ----------------------DFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLP  875 (1351)
T ss_pred             ----------------------ccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence                                  11223334567899999999999999999999999997

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=5e-38  Score=296.03  Aligned_cols=244  Identities=19%  Similarity=0.226  Sum_probs=179.7

Q ss_pred             eeeeccccEEEEEEEEC--CCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEe
Q 013973          103 SKMGEGTFGQVLECWDR--ERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  178 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~--~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e  178 (433)
                      +.||+|+||.||+|...  .++..+|+|.++...  .....+..|+.+++++     .|+|++++++.+.+...+++|||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e   75 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSL-----QHSNLLQCLGQCTEVTPYLLVME   75 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEcCCCCcEEEEE
Confidence            46899999999999864  345679999886432  2334567788888888     67899999999999999999999


Q ss_pred             cC-CCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          179 KL-GSSLYDFLRKNN---YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       179 ~~-~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      |+ +++|.+++....   ...+++..++.++.|++.||+|||+.||+||||||+||+++.++.++++|||+         
T Consensus        76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~---------  146 (269)
T cd05087          76 FCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGL---------  146 (269)
T ss_pred             CCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccc---------
Confidence            99 899999997532   12456778889999999999999999999999999999996655555555554         


Q ss_pred             ccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhCC-------CCCCcchhHHHHHHHHHHHh-CCC
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGL-------GWTYPCDIWSVGCILVELCT-GEA  321 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~-------~~~~~~DvwSlGv~l~ellt-g~~  321 (433)
                                        +......     .....|+..|+|||++.+.       .++.++|+||||+++|||++ |..
T Consensus       147 ------------------~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~  208 (269)
T cd05087         147 ------------------SHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQ  208 (269)
T ss_pred             ------------------cccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCC
Confidence                              4321111     1123567889999998642       35789999999999999996 999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       322 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      ||...+..+........                      .....+..                     ......+..+.+
T Consensus       209 p~~~~~~~~~~~~~~~~----------------------~~~~~~~~---------------------~~~~~~~~~~~~  245 (269)
T cd05087         209 PYRHLSDEQVLTYTVRE----------------------QQLKLPKP---------------------RLKLPLSDRWYE  245 (269)
T ss_pred             CCCCCChHHHHHHHhhc----------------------ccCCCCCC---------------------ccCCCCChHHHH
Confidence            99876554433221110                      00000000                     001134567889


Q ss_pred             HHHhccccCCCCCCCHHHHhc
Q 013973          402 LLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       402 li~~~L~~dP~~R~ta~ell~  422 (433)
                      ++..|+ .+|++|||++||+.
T Consensus       246 l~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         246 VMQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             HHHHHh-cCcccCCCHHHHHH
Confidence            999998 68999999999974

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=5.2e-38  Score=294.50  Aligned_cols=240  Identities=18%  Similarity=0.232  Sum_probs=179.3

Q ss_pred             eeeeccccEEEEEEEECC---CCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee-cCCeEEEE
Q 013973          103 SKMGEGTFGQVLECWDRE---RKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD-YRNHICIV  176 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~---~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~-~~~~~~lV  176 (433)
                      +.||+|+||.||+|.+..   .+..||+|.+...  ....+.+..|+.+++.+     .|++++++++.+. .++..++|
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~~~lv   75 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDF-----SHPNVLSLLGICLPSEGSPLVV   75 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccC-----CCCCcceEEEEeecCCCCcEEE
Confidence            468999999999998754   3467999988532  23345666788888776     6788999999654 56678999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          177 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       177 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      |||+ +++|.+++.... ..+++..+..++.||+.||.|||+.+|+||||||+|||+++++.++++|||           
T Consensus        76 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg-----------  143 (262)
T cd05058          76 LPYMKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFG-----------  143 (262)
T ss_pred             EecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCcc-----------
Confidence            9999 899999997653 346788889999999999999999999999999999999665555555554           


Q ss_pred             cccCCCCCCEEEEecCCccccCCC-------CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCC
Q 013973          256 FKRMPKSSAIKVIDFGSTTYERPD-------QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE  327 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~  327 (433)
                                      ++......       .....++..|+|||++.+..++.++|||||||++|||++ |.+||...+
T Consensus       144 ----------------~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~  207 (262)
T cd05058         144 ----------------LARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD  207 (262)
T ss_pred             ----------------ccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence                            44322111       112245778999999998899999999999999999999 567776654


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ..+....+.                       .+.. .                        ..+...+..+.+++.+||
T Consensus       208 ~~~~~~~~~-----------------------~~~~-~------------------------~~~~~~~~~~~~li~~cl  239 (262)
T cd05058         208 SFDITVYLL-----------------------QGRR-L------------------------LQPEYCPDPLYEVMLSCW  239 (262)
T ss_pred             HHHHHHHHh-----------------------cCCC-C------------------------CCCCcCCHHHHHHHHHHc
Confidence            433222211                       0000 0                        001234567899999999


Q ss_pred             ccCCCCCCCHHHHhcC
Q 013973          408 RYDPTDRLTAREALRH  423 (433)
Q Consensus       408 ~~dP~~R~ta~ell~h  423 (433)
                      +.+|++||++.|++..
T Consensus       240 ~~~p~~Rp~~~~il~~  255 (262)
T cd05058         240 HPKPEMRPTFSELVSR  255 (262)
T ss_pred             CCChhhCCCHHHHHHH
Confidence            9999999999999863

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=8.7e-38  Score=294.22  Aligned_cols=248  Identities=21%  Similarity=0.390  Sum_probs=189.6

Q ss_pred             cEEEEeeeeccccEEEEEEEECC-CCeEEEEEEeecch-----------hhHHHHHHHHHHHHHHHhcCCCCCceEEecc
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRE-RKEMVAIKIVRGIK-----------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRN  165 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~-~~~~vAiK~~~~~~-----------~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~  165 (433)
                      .|++.+.||+|+||.||+|.+.. +++.+|+|.+....           ........|+.++.+.    ..|+|++++++
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~----~~h~~i~~~~~   76 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQ----LRHPNIVRYYK   76 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhc----CCCCCeeeEEe
Confidence            37889999999999999999987 67889999875211           1122334455555432    26789999999


Q ss_pred             eeecCCeEEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCceEeeccCccccC
Q 013973          166 WFDYRNHICIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVP  241 (433)
Q Consensus       166 ~~~~~~~~~lV~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~-~~ivHrDlKp~NILl~~~~~~~i~  241 (433)
                      .+...+..++||||+ +++|.+++...  ....+++..+..++.|++.||.|||+ .||+|+||||+|||+++       
T Consensus        77 ~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~-------  149 (269)
T cd08528          77 TFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGE-------  149 (269)
T ss_pred             eEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECC-------
Confidence            999999999999999 88999987542  22468999999999999999999996 78999999999999954       


Q ss_pred             CCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhC
Q 013973          242 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG  319 (433)
Q Consensus       242 dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg  319 (433)
                                          ++.++|+|||.+.......  ....|+..|+|||++.+..++.++|+||||+++|+|++|
T Consensus       150 --------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g  209 (269)
T cd08528         150 --------------------DDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTL  209 (269)
T ss_pred             --------------------CCcEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhC
Confidence                                4456667777665433221  234688999999999988899999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHH
Q 013973          320 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL  399 (433)
Q Consensus       320 ~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (433)
                      ..||...........+......                        +.                       .....+.++
T Consensus       210 ~~p~~~~~~~~~~~~~~~~~~~------------------------~~-----------------------~~~~~~~~l  242 (269)
T cd08528         210 QPPFYSTNMLSLATKIVEAVYE------------------------PL-----------------------PEGMYSEDV  242 (269)
T ss_pred             CCcccccCHHHHHHHHhhccCC------------------------cC-----------------------CcccCCHHH
Confidence            9999765544333221110000                        00                       011346689


Q ss_pred             HHHHHhccccCCCCCCCHHHHhcC
Q 013973          400 THLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       400 ~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                      .+||.+||+.||++||++.|+..+
T Consensus       243 ~~li~~cl~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         243 TDVITSCLTPDAEARPDIIQVSAM  266 (269)
T ss_pred             HHHHHHHCCCCCccCCCHHHHHHH
Confidence            999999999999999999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=7.9e-38  Score=300.10  Aligned_cols=245  Identities=22%  Similarity=0.274  Sum_probs=186.9

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCe----EEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKE----MVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~----~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      ++|+..+.||+|+||.||+|.+..+++    .||+|.+....  .....+..|+.+++.+     .|+|++++++++...
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l-----~h~niv~~~~~~~~~   81 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM-----DHPHLVRLLGVCLSP   81 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhC-----CCCCcccEEEEEcCC
Confidence            568999999999999999999887775    47888876432  2233566788888877     678999999988654


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                       ..++|+||+ +|+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.            
T Consensus        82 -~~~~v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~------------  147 (303)
T cd05110          82 -TIQLVTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNH------------  147 (303)
T ss_pred             -CceeeehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCc------------
Confidence             567999999 899999987653 36899999999999999999999999999999999999965444            


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALF  323 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf  323 (433)
                                     +||+|||.+.......     ....++..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus       148 ---------------~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~  212 (303)
T cd05110         148 ---------------VKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPY  212 (303)
T ss_pred             ---------------eEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCC
Confidence                           5555555554322111     11245778999999999899999999999999999997 99999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      .+....+....+.                       .+.. .+                        .+...+.++.+++
T Consensus       213 ~~~~~~~~~~~~~-----------------------~~~~-~~------------------------~~~~~~~~~~~li  244 (303)
T cd05110         213 DGIPTREIPDLLE-----------------------KGER-LP------------------------QPPICTIDVYMVM  244 (303)
T ss_pred             CCCCHHHHHHHHH-----------------------CCCC-CC------------------------CCCCCCHHHHHHH
Confidence            7654333222111                       1000 00                        0123456789999


Q ss_pred             HhccccCCCCCCCHHHHhcC
Q 013973          404 QGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~h  423 (433)
                      .+||..||++||++.++++.
T Consensus       245 ~~c~~~~p~~Rp~~~~l~~~  264 (303)
T cd05110         245 VKCWMIDADSRPKFKELAAE  264 (303)
T ss_pred             HHHcCCChhhCcCHHHHHHH
Confidence            99999999999999998764

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-40  Score=292.09  Aligned_cols=259  Identities=21%  Similarity=0.353  Sum_probs=201.6

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ++.+-+..||.|+||+|++-.++.+|+..|||.++...  +...++..|.+...+-    .+.++||++++..-.++..+
T Consensus        64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks----~~cp~IVkfyGa~F~EGdcW  139 (361)
T KOG1006|consen   64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKS----SNCPNIVKFYGALFSEGDCW  139 (361)
T ss_pred             chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhh----cCCcHHHHHhhhhhcCCcee
Confidence            34566789999999999999999999999999998543  4555666677665543    36688999999988899999


Q ss_pred             EEEecCCCCHHHH---HHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          175 IVFEKLGSSLYDF---LRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       175 lV~e~~~~~L~~~---l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      |.||+|..+|..+   +.......+++...-.|+.-.+.||.||.+ ..||||||||+|||+                  
T Consensus       140 iCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILl------------------  201 (361)
T KOG1006|consen  140 ICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILL------------------  201 (361)
T ss_pred             eeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEE------------------
Confidence            9999997776543   333334579999999999999999999985 579999999999999                  


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCC--CCceeecCcccchhhhhC--CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                               +..+.+||||||++......  .+.-+|...|||||.+..  .+|+.+||+||||++|||+.||..||.+-
T Consensus       202 ---------dr~G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w  272 (361)
T KOG1006|consen  202 ---------DRHGDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKW  272 (361)
T ss_pred             ---------ecCCCEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchH
Confidence                     55667888888887654332  233479999999999974  45999999999999999999999999864


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      +.  .+.++......-|+.+..                 +.                       .--+++..+..||.-|
T Consensus       273 ~s--vfeql~~Vv~gdpp~l~~-----------------~~-----------------------~~~~~s~~~~~fintC  310 (361)
T KOG1006|consen  273 DS--VFEQLCQVVIGDPPILLF-----------------DK-----------------------ECVHYSFSMVRFINTC  310 (361)
T ss_pred             HH--HHHHHHHHHcCCCCeecC-----------------cc-----------------------cccccCHHHHHHHHHH
Confidence            33  444444443222221100                 00                       0014677899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      |.+|-..||...+++.+||+..
T Consensus       311 l~Kd~~~Rpky~~Lk~~~fyr~  332 (361)
T KOG1006|consen  311 LIKDRSDRPKYDDLKKFPFYRM  332 (361)
T ss_pred             hhcccccCcchhhhhcCchhhh
Confidence            9999999999999999999864

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=1.7e-37  Score=294.24  Aligned_cols=259  Identities=23%  Similarity=0.346  Sum_probs=190.7

Q ss_pred             CcEEEEeeeeccccEEEEEEEEC----CCCeEEEEEEeecchh--hHHHHHHHHHHHHHHHhcCCCCCceEEecceeec-
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDR----ERKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY-  169 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~----~~~~~vAiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~-  169 (433)
                      ..|++.+.||+|+||.||+|...    .+++.||+|+++....  ....+..|+.+++.+     .|++++++++++.. 
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l-----~~~~i~~~~~~~~~~   78 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTL-----DHENIVKYKGVCEKP   78 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhC-----CCCChheEEeeeecC
Confidence            45888999999999999999864    3478999999975443  356778899888887     56889999998876 


Q ss_pred             -CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC
Q 013973          170 -RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       170 -~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                       ....++||||+ +++|.+++.... ..+++..+..++.|++.||+|||++||+|+||||+||+++.+            
T Consensus        79 ~~~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~------------  145 (284)
T cd05038          79 GGRSLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESE------------  145 (284)
T ss_pred             CCCceEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCC------------
Confidence             66899999999 899999997654 359999999999999999999999999999999999999554            


Q ss_pred             CCCCCCcccccCCCCCCEEEEecCCccccCCCCC------ceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCC
Q 013973          248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN------YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA  321 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~  321 (433)
                                     +.++|+|||.+........      ...++..|+|||.+.+..++.++|+||||+++|||++|..
T Consensus       146 ---------------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~  210 (284)
T cd05038         146 ---------------DLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGD  210 (284)
T ss_pred             ---------------CCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCC
Confidence                           4556666665554332111      1134567999999998899999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCC-HHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHH
Q 013973          322 LFQTHENLEHLAMMERVLGPLP-QHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  400 (433)
Q Consensus       322 Pf~~~~~~~~~~~i~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (433)
                      ||........     ...+... .........    .+..+. .                        ...+..++.++.
T Consensus       211 p~~~~~~~~~-----~~~~~~~~~~~~~~~~~----~~~~~~-~------------------------~~~~~~~~~~~~  256 (284)
T cd05038         211 PSQSPPAEFL-----RMIGIAQGQMIVTRLLE----LLKEGE-R------------------------LPRPPSCPDEVY  256 (284)
T ss_pred             Ccccccchhc-----cccccccccccHHHHHH----HHHcCC-c------------------------CCCCccCCHHHH
Confidence            9865332110     0001000 000000000    000000 0                        001124457899


Q ss_pred             HHHHhccccCCCCCCCHHHHhc
Q 013973          401 HLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       401 ~li~~~L~~dP~~R~ta~ell~  422 (433)
                      +|+.+||+.||++|||+.|+++
T Consensus       257 ~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         257 DLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             HHHHHHhccChhhCCCHHHHHH
Confidence            9999999999999999999975

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-37  Score=298.40  Aligned_cols=258  Identities=23%  Similarity=0.338  Sum_probs=209.3

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ..+...+.++||+|-||.|.+|... .+..||+|+++..  +..+..+..|+++|.++     .||||+.+++.|..++.
T Consensus       536 PRs~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqL-----khPNIveLvGVC~~DeP  609 (807)
T KOG1094|consen  536 PRSRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNARNDFLKEIKILSRL-----KHPNIVELLGVCVQDDP  609 (807)
T ss_pred             chhheehhhhhcCcccceeEEEEec-CceEEEEeecCcccchhHHHHHHHHHHHHhcc-----CCCCeeEEEeeeecCCc
Confidence            3567889999999999999999864 3688999999843  34567889999999999     66999999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +|+++||| .|+|.+||.......+......+|+.||++|++||.+.++|||||.+.|+|+                   
T Consensus       610 icmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv-------------------  670 (807)
T KOG1094|consen  610 LCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLV-------------------  670 (807)
T ss_pred             hHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceee-------------------
Confidence            99999999 9999999988753344556677899999999999999999999999999999                   


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCCCc-----eeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh--CCCCCC
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQNY-----IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT--GEALFQ  324 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~-----~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt--g~~Pf~  324 (433)
                              +++.++||+|||.++....+..+     .+-...|||+|.+.-.+++.++|+|+||+++||+++  ...||.
T Consensus       671 --------~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~  742 (807)
T KOG1094|consen  671 --------DGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYS  742 (807)
T ss_pred             --------cCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchh
Confidence                    66777888888887755544433     344788999999999999999999999999999865  679998


Q ss_pred             CCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHH
Q 013973          325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  404 (433)
Q Consensus       325 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  404 (433)
                      ...+.+........+...+..                                         .+...+..++..+.++|.
T Consensus       743 ~lt~e~vven~~~~~~~~~~~-----------------------------------------~~l~~P~~cp~~lyelml  781 (807)
T KOG1094|consen  743 QLTDEQVVENAGEFFRDQGRQ-----------------------------------------VVLSRPPACPQGLYELML  781 (807)
T ss_pred             hhhHHHHHHhhhhhcCCCCcc-----------------------------------------eeccCCCcCcHHHHHHHH
Confidence            877776665544443322211                                         112235577888999999


Q ss_pred             hccccCCCCCCCHHHHhcCCCCCC
Q 013973          405 GLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       405 ~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      .||.+|-++||+.+++  |-+|++
T Consensus       782 ~Cw~~es~~RPsFe~l--h~~lq~  803 (807)
T KOG1094|consen  782 RCWRRESEQRPSFEQL--HLFLQE  803 (807)
T ss_pred             HHhchhhhcCCCHHHH--HHHHHH
Confidence            9999999999999998  434443

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=4.6e-37  Score=289.46  Aligned_cols=244  Identities=21%  Similarity=0.228  Sum_probs=178.2

Q ss_pred             eeeeccccEEEEEEEECCC--CeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEe
Q 013973          103 SKMGEGTFGQVLECWDRER--KEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  178 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~--~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e  178 (433)
                      ++||+|+||.||+|....+  ...+++|.++...  ...+.+..|+.+++.+     .|+|++++++.+......|+|||
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-----~h~~iv~~~~~~~~~~~~~lv~e   75 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRIL-----QHPNILQCLGQCVEAIPYLLVFE   75 (268)
T ss_pred             CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhcc-----CCcchhheEEEecCCCccEEEEe
Confidence            3699999999999975433  2346777765332  3445677788877776     67899999999999999999999


Q ss_pred             cC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          179 KL-GSSLYDFLRKNN--YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       179 ~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      |+ +++|.+++.+..  ...+++..+..++.||+.||+|||+.+|+||||||+|||++.++.                  
T Consensus        76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~------------------  137 (268)
T cd05086          76 YCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLT------------------  137 (268)
T ss_pred             cCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCcc------------------
Confidence            99 899999997642  234677788899999999999999999999999999999965554                  


Q ss_pred             cccCCCCCCEEEEecCCccccCC-----CCCceeecCcccchhhhhC-------CCCCCcchhHHHHHHHHHHHh-CCCC
Q 013973          256 FKRMPKSSAIKVIDFGSTTYERP-----DQNYIVSTRHYRAPEVILG-------LGWTYPCDIWSVGCILVELCT-GEAL  322 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGv~l~ellt-g~~P  322 (433)
                               ++|+|||++.....     .....+|+..|+|||++..       ..++.++|||||||++|||++ |..|
T Consensus       138 ---------~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p  208 (268)
T cd05086         138 ---------VKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQP  208 (268)
T ss_pred             ---------EEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCC
Confidence                     55555554432111     1123467889999999853       245789999999999999997 5789


Q ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       323 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      |...+..+.+..+.....                      ...+.                     ......++..+.++
T Consensus       209 ~~~~~~~~~~~~~~~~~~----------------------~~~~~---------------------~~~~~~~~~~~~~l  245 (268)
T cd05086         209 YSHLSDREVLNHVIKDQQ----------------------VKLFK---------------------PQLELPYSERWYEV  245 (268)
T ss_pred             CCCCCHHHHHHHHHhhcc----------------------cccCC---------------------CccCCCCcHHHHHH
Confidence            977666554443221100                      00000                     00112356678899


Q ss_pred             HHhccccCCCCCCCHHHHhc
Q 013973          403 LQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       403 i~~~L~~dP~~R~ta~ell~  422 (433)
                      +..|| .+|++||++.|+++
T Consensus       246 ~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         246 LQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             HHHHh-hCcccCCCHHHHHH
Confidence            99999 68999999999975

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=100.00  E-value=8.5e-37  Score=306.84  Aligned_cols=271  Identities=22%  Similarity=0.376  Sum_probs=183.9

Q ss_pred             cCcEEEEeeeeccccEEEEEEEEC----------------CCCeEEEEEEeecchh-hH--------------HHHHHHH
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDR----------------ERKEMVAIKIVRGIKK-YR--------------EAAMIEI  144 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~----------------~~~~~vAiK~~~~~~~-~~--------------~~~~~E~  144 (433)
                      .++|++.++||+|+||.||+|...                ..++.||||.++.... ..              +....|+
T Consensus       144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~  223 (507)
T PLN03224        144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA  223 (507)
T ss_pred             ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence            468999999999999999999752                2346799999863221 11              1223466


Q ss_pred             HHHHHHHhcCCCCCceEEecceeec--------CCeEEEEEecC-CCCHHHHHHhcCC----------------------
Q 013973          145 EVLQQLAKHDKGGNRCVQIRNWFDY--------RNHICIVFEKL-GSSLYDFLRKNNY----------------------  193 (433)
Q Consensus       145 ~~l~~l~~~~~~~~~i~~~~~~~~~--------~~~~~lV~e~~-~~~L~~~l~~~~~----------------------  193 (433)
                      ..+.++.++...+.+++.+++++..        .+..+|||||+ +++|.++|+....                      
T Consensus       224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~  303 (507)
T PLN03224        224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ  303 (507)
T ss_pred             HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence            6666776655445567777777643        35789999999 8999999874311                      


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCc
Q 013973          194 RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST  273 (433)
Q Consensus       194 ~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a  273 (433)
                      ..+++..++.++.|++.||.|||+.+|+||||||+|||++.                           +..+||+|||++
T Consensus       304 ~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~---------------------------~~~~kL~DFGla  356 (507)
T PLN03224        304 DKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTV---------------------------DGQVKIIDFGAA  356 (507)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECC---------------------------CCcEEEEeCcCc
Confidence            12466788899999999999999999999999999999954                           445677777766


Q ss_pred             cccCCCC----CceeecCcccchhhhhCCC--------------------CC--CcchhHHHHHHHHHHHhCCC-CCCCC
Q 013973          274 TYERPDQ----NYIVSTRHYRAPEVILGLG--------------------WT--YPCDIWSVGCILVELCTGEA-LFQTH  326 (433)
Q Consensus       274 ~~~~~~~----~~~~gt~~y~aPE~~~~~~--------------------~~--~~~DvwSlGv~l~elltg~~-Pf~~~  326 (433)
                      .......    ....+|+.|+|||.+....                    |+  .+.|+||+||++|+|++|.. ||...
T Consensus       357 ~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~  436 (507)
T PLN03224        357 VDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANI  436 (507)
T ss_pred             cccccCCccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccch
Confidence            5432211    1123488999999986422                    22  34799999999999999975 77543


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      ......  + .....    ....    .+. +....+.++                        ..+..+....||+.+|
T Consensus       437 ~~f~~~--~-~~~~~----~~~~----~r~-~~~~~~~~~------------------------~~d~~s~~~~dLi~~L  480 (507)
T PLN03224        437 RLFNTE--L-RQYDN----DLNR----WRM-YKGQKYDFS------------------------LLDRNKEAGWDLACKL  480 (507)
T ss_pred             hhhhhH--H-hhccc----hHHH----HHh-hcccCCCcc------------------------cccccChHHHHHHHHH
Confidence            211100  0 00000    0000    000 011111111                        1345678899999999


Q ss_pred             cccCC---CCCCCHHHHhcCCCCCCC
Q 013973          407 LRYDP---TDRLTAREALRHPFFTRD  429 (433)
Q Consensus       407 L~~dP---~~R~ta~ell~hp~f~~~  429 (433)
                      |.++|   .+|+|++|+|+||||..+
T Consensus       481 L~~~~~~~~~RlSa~eaL~Hp~f~~~  506 (507)
T PLN03224        481 ITKRDQANRGRLSVGQALSHRFFLPE  506 (507)
T ss_pred             hccCCCCcccCCCHHHHhCCCCcCCC
Confidence            99876   689999999999999754

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=3.6e-37  Score=290.56  Aligned_cols=245  Identities=18%  Similarity=0.249  Sum_probs=184.6

Q ss_pred             EEEEeeeeccccEEEEEEEEC---CCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC-
Q 013973           99 YKIHSKMGEGTFGQVLECWDR---ERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN-  171 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~---~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~-  171 (433)
                      |.+.+.||+|+||.||+|.+.   .+++.||||++...   ....+.+..|+.+++.+     .|++++++++.+.... 
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~   75 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEF-----DHPNVIKLIGVSLRSRA   75 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcC-----CCCCcceEEEEEccCCC
Confidence            567889999999999999865   35788999998642   23345567788888888     6788999999775432 


Q ss_pred             -----eEEEEEecC-CCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccC
Q 013973          172 -----HICIVFEKL-GSSLYDFLRKNN----YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVP  241 (433)
Q Consensus       172 -----~~~lV~e~~-~~~L~~~l~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~  241 (433)
                           ..++++||+ +++|.+++....    ...+++..+..++.||+.||+|||+.||+||||||+||++++++     
T Consensus        76 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~-----  150 (273)
T cd05074          76 KGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENM-----  150 (273)
T ss_pred             CCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCC-----
Confidence                 347889999 899998875322    12578999999999999999999999999999999999995544     


Q ss_pred             CCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHH
Q 013973          242 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL  316 (433)
Q Consensus       242 dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el  316 (433)
                                            .+||+|||.++......     ....++..|++||.+.+..++.++|||||||++|+|
T Consensus       151 ----------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el  208 (273)
T cd05074         151 ----------------------TVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEI  208 (273)
T ss_pred             ----------------------CEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHH
Confidence                                  45555555554322111     122456789999999998999999999999999999


Q ss_pred             Hh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCc
Q 013973          317 CT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS  395 (433)
Q Consensus       317 lt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (433)
                      ++ |.+||.+.+..+....+..                      ...+.                          .+...
T Consensus       209 ~~~g~~p~~~~~~~~~~~~~~~----------------------~~~~~--------------------------~~~~~  240 (273)
T cd05074         209 MTRGQTPYAGVENSEIYNYLIK----------------------GNRLK--------------------------QPPDC  240 (273)
T ss_pred             hhCCCCCCCCCCHHHHHHHHHc----------------------CCcCC--------------------------CCCCC
Confidence            99 8999976654433222111                      00000                          01234


Q ss_pred             hhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          396 AGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       396 ~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                      +..+.+++.+||+.+|++||++.+++++
T Consensus       241 ~~~~~~l~~~~l~~~p~~Rps~~~~~~~  268 (273)
T cd05074         241 LEDVYELMCQCWSPEPKCRPSFQHLRDQ  268 (273)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            5689999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.5e-38  Score=303.28  Aligned_cols=245  Identities=22%  Similarity=0.349  Sum_probs=213.4

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      ..+.....+||-|-||.||.|+++.-.-.||||.++......+++..|..+|+.|     .|+|+|++++.|..+..+||
T Consensus       266 RtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKei-----kHpNLVqLLGVCT~EpPFYI  340 (1157)
T KOG4278|consen  266 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-----KHPNLVQLLGVCTHEPPFYI  340 (1157)
T ss_pred             chheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhh-----cCccHHHHhhhhccCCCeEE
Confidence            4456778899999999999999999999999999998888889999999999999     77999999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      |+||| .|+|.+||+..++.-++.-..+.++.||.+|++||..+++|||||...|+|+                      
T Consensus       341 iTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLV----------------------  398 (1157)
T KOG4278|consen  341 ITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV----------------------  398 (1157)
T ss_pred             EEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccc----------------------
Confidence            99999 9999999999887788888899999999999999999999999999999999                      


Q ss_pred             ccccCCCCCCEEEEecCCccccCCCCCc-eee---cCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPDQNY-IVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  329 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~~~~-~~g---t~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~  329 (433)
                           .++..+|++|||+++....+..+ ..|   ..-|.|||-+.-..++.++|||+|||+|||+.| |..||.+.+-.
T Consensus       399 -----gEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS  473 (1157)
T KOG4278|consen  399 -----GENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS  473 (1157)
T ss_pred             -----cccceEEeeccchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHH
Confidence                 67778899999999877655433 233   567999999999999999999999999999998 99999987765


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +.+..+.+                       |                         .-++.+..+++...+|++.||++
T Consensus       474 qVY~LLEk-----------------------g-------------------------yRM~~PeGCPpkVYeLMraCW~W  505 (1157)
T KOG4278|consen  474 QVYGLLEK-----------------------G-------------------------YRMDGPEGCPPKVYELMRACWNW  505 (1157)
T ss_pred             HHHHHHhc-----------------------c-------------------------ccccCCCCCCHHHHHHHHHHhcC
Confidence            55543221                       1                         11223457888999999999999


Q ss_pred             CCCCCCCHHHH
Q 013973          410 DPTDRLTAREA  420 (433)
Q Consensus       410 dP~~R~ta~el  420 (433)
                      +|.+||+.+|+
T Consensus       506 sPsDRPsFaei  516 (1157)
T KOG4278|consen  506 SPSDRPSFAEI  516 (1157)
T ss_pred             CcccCccHHHH
Confidence            99999998876

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=100.00  E-value=9.6e-38  Score=292.15  Aligned_cols=324  Identities=24%  Similarity=0.382  Sum_probs=222.3

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECC---CCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRE---RKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~---~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      +.+.|.++++||+|+|++||+|.+..   .++.||+|.+... ........|++.|..+.    ++.||+.+.+.+..++
T Consensus        34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t-s~p~ri~~El~~L~~~g----G~~ni~~~~~~~rnnd  108 (418)
T KOG1167|consen   34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT-SSPSRILNELEMLYRLG----GSDNIIKLNGCFRNND  108 (418)
T ss_pred             hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc-cCchHHHHHHHHHHHhc----cchhhhcchhhhccCC
Confidence            34669999999999999999999887   7889999998743 34456888999999885    4567999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeecc-CccccCCCcCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSS-EYIKVPDYKSSLHT  249 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~-~~~~i~dfg~~~~~  249 (433)
                      .+++||||+ .....+++.     .++..+++.|+..++.||.++|.+|||||||||+|+|.+.. +...|.|||++.+.
T Consensus       109 ~v~ivlp~~~H~~f~~l~~-----~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~  183 (418)
T KOG1167|consen  109 QVAIVLPYFEHDRFRDLYR-----SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRY  183 (418)
T ss_pred             eeEEEecccCccCHHHHHh-----cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHH
Confidence            999999999 667777765     37789999999999999999999999999999999999764 77889999998732


Q ss_pred             CCCC-c-cccc------CC-CCCCEEEEec-------CCcc---ccCCC-CCceeecCcccchhhhhCCC-CCCcchhHH
Q 013973          250 PKDS-S-YFKR------MP-KSSAIKVIDF-------GSTT---YERPD-QNYIVSTRHYRAPEVILGLG-WTYPCDIWS  308 (433)
Q Consensus       250 ~~~~-~-~~~~------~~-~~~~~kl~Df-------g~a~---~~~~~-~~~~~gt~~y~aPE~~~~~~-~~~~~DvwS  308 (433)
                      .... . ....      .. ....+....+       |..+   ...+. .....||++|.|||++...+ .++++||||
T Consensus       184 d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws  263 (418)
T KOG1167|consen  184 DGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWS  263 (418)
T ss_pred             HhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceee
Confidence            1110 0 0000      00 0000000000       0000   00000 12247999999999998654 689999999


Q ss_pred             HHHHHHHHHhCCCCC-CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhh----ccc-h
Q 013973          309 VGCILVELCTGEALF-QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSV----MKL-P  382 (433)
Q Consensus       309 lGv~l~elltg~~Pf-~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~  382 (433)
                      .||+++.++++.+|| ...++.+.+.++..++|...-.-....-.. -.++++  -..+....-+-.+...    +.- .
T Consensus       264 ~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~-~~l~~k--sn~~~~~e~~~~f~s~~~~~~~~~~  340 (418)
T KOG1167|consen  264 AGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGR-ILLWQK--SNIPTIPELRVNFETLHIESIYKSR  340 (418)
T ss_pred             ccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCc-eeeecc--ccccccHHHHhchhccChhhccccc
Confidence            999999999999998 455677788888888887432211111100 001110  0011111000011111    000 0


Q ss_pred             hHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCCCCC
Q 013973          383 RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL  431 (433)
Q Consensus       383 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~~~  431 (433)
                      ..-.......+.++..+.||+.+||..||.+|.||+++|+||||...++
T Consensus       341 q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~~~  389 (418)
T KOG1167|consen  341 QPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEADR  389 (418)
T ss_pred             ccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcchhh
Confidence            0001223345667778999999999999999999999999999986543

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.7e-38  Score=292.66  Aligned_cols=260  Identities=24%  Similarity=0.449  Sum_probs=201.9

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhh--------HHHHHHHHHHHHHHHhcCCCCCceEEecc
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY--------REAAMIEIEVLQQLAKHDKGGNRCVQIRN  165 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--------~~~~~~E~~~l~~l~~~~~~~~~i~~~~~  165 (433)
                      .+.++|-++.+||+|||+.||+|.+...++.||+|+-.-.+.+        .+-..+|..|-+.|     .|+.||++|+
T Consensus       460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeL-----DHpRIVKlYD  534 (775)
T KOG1151|consen  460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKEL-----DHPRIVKLYD  534 (775)
T ss_pred             chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhcc-----Ccceeeeeee
Confidence            4567899999999999999999999999999999986433322        23344566665555     8899999999


Q ss_pred             eee-cCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCceEeeccCccccC
Q 013973          166 WFD-YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC--MIHTDLKPENVLLVSSEYIKVP  241 (433)
Q Consensus       166 ~~~-~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlKp~NILl~~~~~~~i~  241 (433)
                      +|. +.+.+|-|+||| |.+|.-||....  .+++.+++.|+.||+.||.||.+..  |||-||||.|||+.+.      
T Consensus       535 yfslDtdsFCTVLEYceGNDLDFYLKQhk--lmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~G------  606 (775)
T KOG1151|consen  535 YFSLDTDSFCTVLEYCEGNDLDFYLKQHK--LMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNG------  606 (775)
T ss_pred             eeeeccccceeeeeecCCCchhHHHHhhh--hhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecC------
Confidence            986 567899999999 888888887764  8999999999999999999999865  9999999999999542      


Q ss_pred             CCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC----------CceeecCcccchhhhhCC----CCCCcchhH
Q 013973          242 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----------NYIVSTRHYRAPEVILGL----GWTYPCDIW  307 (433)
Q Consensus       242 dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----------~~~~gt~~y~aPE~~~~~----~~~~~~Dvw  307 (433)
                                        ...+.+||.|||++.....+.          +...||.+|++||.+.-.    ..+.++|||
T Consensus       607 ------------------tacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVW  668 (775)
T KOG1151|consen  607 ------------------TACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVW  668 (775)
T ss_pred             ------------------cccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeE
Confidence                              345667777777776554432          234799999999988643    367899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHH
Q 013973          308 SVGCILVELCTGEALFQTHENL-EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN  386 (433)
Q Consensus       308 SlGv~l~elltg~~Pf~~~~~~-~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  386 (433)
                      |+|||+|..+.|+-||...-.. +++.. ..+                   +......+|.                   
T Consensus       669 SvGVIFyQClYGrKPFGhnqsQQdILqe-NTI-------------------lkAtEVqFP~-------------------  709 (775)
T KOG1151|consen  669 SVGVIFYQCLYGRKPFGHNQSQQDILQE-NTI-------------------LKATEVQFPP-------------------  709 (775)
T ss_pred             eeehhhhhhhccCCCCCCchhHHHHHhh-hch-------------------hcceeccCCC-------------------
Confidence            9999999999999999643222 22211 110                   1111222222                   


Q ss_pred             HHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          387 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       387 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                           -+..+.++++||++||++.-++|....|+-.||+|--
T Consensus       710 -----KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP  746 (775)
T KOG1151|consen  710 -----KPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP  746 (775)
T ss_pred             -----CCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence                 1356778999999999999999999999999999965

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-37  Score=305.72  Aligned_cols=246  Identities=23%  Similarity=0.340  Sum_probs=211.3

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCC---eEEEEEEeec--chhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERK---EMVAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~---~~vAiK~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      +...|.++||.|.||.|++|+.+..+   ..||||.++.  ..+.+..+..|..||.++     .||||+.+.+......
T Consensus       629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF-----dHPNIIrLEGVVTks~  703 (996)
T KOG0196|consen  629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF-----DHPNIIRLEGVVTKSK  703 (996)
T ss_pred             hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC-----CCCcEEEEEEEEecCc
Confidence            34678899999999999999998766   4699999984  456778899999999998     8899999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+.||.||| +|+|..||+++.+ .|++.+...+++.|+.|++||-++|+|||||...|||+                  
T Consensus       704 PvMIiTEyMENGsLDsFLR~~DG-qftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILV------------------  764 (996)
T KOG0196|consen  704 PVMIITEYMENGSLDSFLRQNDG-QFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILV------------------  764 (996)
T ss_pred             eeEEEhhhhhCCcHHHHHhhcCC-ceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheee------------------
Confidence            999999999 9999999998874 59999999999999999999999999999999999999                  


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCCCc----eee--cCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY----IVS--TRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALF  323 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~----~~g--t~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf  323 (433)
                               +.+..+|++|||+++...++...    ..|  ...|.|||.|...+++.+|||||||++|||.++ |..||
T Consensus       765 ---------NsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPY  835 (996)
T KOG0196|consen  765 ---------NSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY  835 (996)
T ss_pred             ---------ccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcc
Confidence                     55667788888887765444311    122  467999999999999999999999999999888 99999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      =+.++.+.+..|.+...-+|                                                +..++..+..|+
T Consensus       836 WdmSNQdVIkaIe~gyRLPp------------------------------------------------PmDCP~aL~qLM  867 (996)
T KOG0196|consen  836 WDMSNQDVIKAIEQGYRLPP------------------------------------------------PMDCPAALYQLM  867 (996)
T ss_pred             cccchHHHHHHHHhccCCCC------------------------------------------------CCCCcHHHHHHH
Confidence            88888887777655433222                                                347788999999


Q ss_pred             HhccccCCCCCCCHHHHhcC
Q 013973          404 QGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~h  423 (433)
                      ..||++|-.+||...|++.+
T Consensus       868 ldCWqkdR~~RP~F~qiV~~  887 (996)
T KOG0196|consen  868 LDCWQKDRNRRPKFAQIVST  887 (996)
T ss_pred             HHHHHHHhhcCCCHHHHHHH
Confidence            99999999999999998753

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.9e-36  Score=282.39  Aligned_cols=265  Identities=22%  Similarity=0.293  Sum_probs=202.8

Q ss_pred             eeecCceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEeccee
Q 013973           88 MFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  167 (433)
Q Consensus        88 ~~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~  167 (433)
                      ++-....+..+..+++.||+|.||.||+|..+  |+.||||++...  ....+.+|.+|.+.+..   .|+||+.+++..
T Consensus       202 plLVQRTiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~sr--dE~SWfrEtEIYqTvmL---RHENILgFIaaD  274 (513)
T KOG2052|consen  202 PLLVQRTIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSR--DERSWFRETEIYQTVML---RHENILGFIAAD  274 (513)
T ss_pred             hhHhHHhhhheeEEEEEecCccccceeecccc--CCceEEEEeccc--chhhhhhHHHHHHHHHh---ccchhhhhhhcc
Confidence            34444456778999999999999999999774  677999999743  34667788898888755   678899998876


Q ss_pred             ecC----CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-----CC---ceeccCCCCceEeec
Q 013973          168 DYR----NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-----LC---MIHTDLKPENVLLVS  234 (433)
Q Consensus       168 ~~~----~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-----~~---ivHrDlKp~NILl~~  234 (433)
                      ..+    ..++||.+|- .|+|+|||...   .++.+...+++..++.||+|||-     +|   |.|||||..|||+..
T Consensus       275 ~~~~gs~TQLwLvTdYHe~GSL~DyL~r~---tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKk  351 (513)
T KOG2052|consen  275 NKDNGSWTQLWLVTDYHEHGSLYDYLNRN---TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK  351 (513)
T ss_pred             ccCCCceEEEEEeeecccCCcHHHHHhhc---cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEcc
Confidence            543    3689999999 99999999875   69999999999999999999994     23   999999999999977


Q ss_pred             cCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCC----C--CCcchhHH
Q 013973          235 SEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLG----W--TYPCDIWS  308 (433)
Q Consensus       235 ~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~----~--~~~~DvwS  308 (433)
                      +|..-|+|+|++...+.+..            .+|.        ..+..+||..|||||++...-    +  -..+||||
T Consensus       352 n~~C~IADLGLAv~h~~~t~------------~idi--------~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYa  411 (513)
T KOG2052|consen  352 NGTCCIADLGLAVRHDSDTD------------TIDI--------PPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYA  411 (513)
T ss_pred             CCcEEEeeceeeEEecccCC------------cccC--------CCCCccceeeccChHHhhhhcChhhhhhhhHHHHHH
Confidence            66666666665554433221            1111        123458999999999997532    1  25689999


Q ss_pred             HHHHHHHHHhCC----------CCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhh
Q 013973          309 VGCILVELCTGE----------ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSV  378 (433)
Q Consensus       309 lGv~l~elltg~----------~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  378 (433)
                      ||+++||++...          +||                                       +++.+...+.+.+..+
T Consensus       412 fgLVlWEiarRc~~ggi~eey~~Py---------------------------------------yd~Vp~DPs~eeMrkV  452 (513)
T KOG2052|consen  412 FGLVLWEIARRCESGGIVEEYQLPY---------------------------------------YDVVPSDPSFEEMRKV  452 (513)
T ss_pred             HHHHHHHHHHHhhcCCEehhhcCCc---------------------------------------ccCCCCCCCHHHHhcc
Confidence            999999998642          333                                       2455556677788888


Q ss_pred             ccchhHHHHHhhhcCCch--hHHHHHHHhccccCCCCCCCHHHHh
Q 013973          379 MKLPRLQNLIMQHVDHSA--GDLTHLLQGLLRYDPTDRLTAREAL  421 (433)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~--~~~~~li~~~L~~dP~~R~ta~ell  421 (433)
                      +...+++..+...+...+  ..+..+++.||..||.-|.||-.+.
T Consensus       453 VCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriK  497 (513)
T KOG2052|consen  453 VCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIK  497 (513)
T ss_pred             eeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence            888887777666665544  4567899999999999999986553

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=6.5e-36  Score=290.14  Aligned_cols=242  Identities=22%  Similarity=0.359  Sum_probs=196.4

Q ss_pred             cEEEEeeeeccccEEEEEEEECCC----CeEEEEEEeec--chhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRER----KEMVAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~----~~~vAiK~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      ...+.++||.|-||.||+|....-    .-.||||..+.  .....+.+..|..+++++     .||||+++++.+.+ .
T Consensus       390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnf-----dHphIikLIGv~~e-~  463 (974)
T KOG4257|consen  390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNF-----DHPHIIKLIGVCVE-Q  463 (974)
T ss_pred             hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhC-----CCcchhheeeeeec-c
Confidence            455668999999999999986432    34599998874  334577889999999998     88999999999875 5


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      ..+||||.+ -|.|..||+.+. ..|+.....-|+.||+.||.|||+...|||||...|||+.+..              
T Consensus       464 P~WivmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~--------------  528 (974)
T KOG4257|consen  464 PMWIVMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQ--------------  528 (974)
T ss_pred             ceeEEEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcc--------------
Confidence            689999999 899999999765 4799999999999999999999999999999999999996544              


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCCCce----eecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI----VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQT  325 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~----~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~  325 (433)
                                   .+||+|||+++...++..+.    .-..-|||||-+.-.+++.++|||-|||++||++. |..||.+
T Consensus       529 -------------CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqg  595 (974)
T KOG4257|consen  529 -------------CVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQG  595 (974)
T ss_pred             -------------eeeecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccc
Confidence                         46666666666655544221    22557999999999999999999999999999987 9999998


Q ss_pred             CChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHh
Q 013973          326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  405 (433)
Q Consensus       326 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  405 (433)
                      ..+.+....                       +++|..                         .+.++.+++.+..|+.+
T Consensus       596 vkNsDVI~~-----------------------iEnGeR-------------------------lP~P~nCPp~LYslmsk  627 (974)
T KOG4257|consen  596 VKNSDVIGH-----------------------IENGER-------------------------LPCPPNCPPALYSLMSK  627 (974)
T ss_pred             ccccceEEE-----------------------ecCCCC-------------------------CCCCCCCChHHHHHHHH
Confidence            776554433                       233311                         12456889999999999


Q ss_pred             ccccCCCCCCCHHHHh
Q 013973          406 LLRYDPTDRLTAREAL  421 (433)
Q Consensus       406 ~L~~dP~~R~ta~ell  421 (433)
                      ||.+||.+||...|+.
T Consensus       628 cWayeP~kRPrftei~  643 (974)
T KOG4257|consen  628 CWAYEPSKRPRFTEIK  643 (974)
T ss_pred             HhccCcccCCcHHHHH
Confidence            9999999999987664

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-36  Score=285.64  Aligned_cols=258  Identities=23%  Similarity=0.278  Sum_probs=188.4

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC----e
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN----H  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~----~  172 (433)
                      ...++.+.||+|.||.||+|..  +++.||||++.  ...++.+..|.+|......   .|+||+++++.-+-..    .
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp--~~~kqs~~~Ek~Iy~lp~m---~h~nIl~Fi~~ekr~t~~~~e  282 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFP--EQEKQSFQNEKNIYSLPGM---KHENILQFIGAEKRGTADRME  282 (534)
T ss_pred             CchhhHHHhhcCccceeehhhc--cCceeEEEecC--HHHHHHHHhHHHHHhccCc---cchhHHHhhchhccCCccccc
Confidence            4578889999999999999976  45899999997  4556778889888876633   6789999998766544    8


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---------CCceeccCCCCceEeeccCccccCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD---------LCMIHTDLKPENVLLVSSEYIKVPD  242 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---------~~ivHrDlKp~NILl~~~~~~~i~d  242 (433)
                      +.||++|. .|+|.+||..+   .++|....+++..+++||+|||+         .+|+|||||..|||+.+|+      
T Consensus       283 ywLVt~fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~Dl------  353 (534)
T KOG3653|consen  283 YWLVTEFHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDL------  353 (534)
T ss_pred             eeEEeeeccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCC------
Confidence            99999999 99999999886   59999999999999999999996         3599999999999996555      


Q ss_pred             CcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCC-C-----CCcchhHHHHH
Q 013973          243 YKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLG-W-----TYPCDIWSVGC  311 (433)
Q Consensus       243 fg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~-~-----~~~~DvwSlGv  311 (433)
                                           ...|+|||+|....+..     ...+||..|||||++.+.- +     -.+.||||+|.
T Consensus       354 ---------------------TccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgL  412 (534)
T KOG3653|consen  354 ---------------------TCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGL  412 (534)
T ss_pred             ---------------------cEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHH
Confidence                                 45555555554433322     2258999999999998742 2     25789999999


Q ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH--HHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHh
Q 013973          312 ILVELCTGEALFQTHENLEHLAMMERVLGPLPQ--HMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM  389 (433)
Q Consensus       312 ~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (433)
                      +||||++...-+......++..-....+|..|.  ++...+.      ..+++..+|+....                  
T Consensus       413 VLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV------~kK~RP~~p~~W~~------------------  468 (534)
T KOG3653|consen  413 VLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVV------RKKQRPKIPDAWRK------------------  468 (534)
T ss_pred             HHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHH------hhccCCCChhhhhc------------------
Confidence            999999987666433333333334444555442  1111110      01122222221100                  


Q ss_pred             hhcCCchhHHHHHHHhccccCCCCCCCHH
Q 013973          390 QHVDHSAGDLTHLLQGLLRYDPTDRLTAR  418 (433)
Q Consensus       390 ~~~~~~~~~~~~li~~~L~~dP~~R~ta~  418 (433)
                         .....-+++.+..||+.||+.|+||.
T Consensus       469 ---h~~~~~l~et~EeCWDhDaeARLTA~  494 (534)
T KOG3653|consen  469 ---HAGMAVLCETIEECWDHDAEARLTAG  494 (534)
T ss_pred             ---CccHHHHHHHHHHHcCCchhhhhhhH
Confidence               12234589999999999999999975

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=100.00  E-value=8.1e-37  Score=305.97  Aligned_cols=253  Identities=24%  Similarity=0.311  Sum_probs=190.5

Q ss_pred             EEEEeeeeccccEE-EEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEE
Q 013973           99 YKIHSKMGEGTFGQ-VLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  177 (433)
Q Consensus        99 ~~~~~~iG~G~~g~-V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~  177 (433)
                      |.-.+.+|.|+.|+ ||+|..  .|+.||||.+-  ....+.+.+|+..|+.-    ..|+||++.++.-.+..+.||+.
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll--~e~~~~A~rEi~lL~eS----D~H~NviRyyc~E~d~qF~YIal  582 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVY--EGREVAVKRLL--EEFFDFAQREIQLLQES----DEHPNVIRYYCSEQDRQFLYIAL  582 (903)
T ss_pred             eccHHHcccCCCCcEEEEEee--CCceehHHHHh--hHhHHHHHHHHHHHHhc----cCCCceEEEEeeccCCceEEEEe
Confidence            44457899999887 799976  56789999774  34456677899888765    36789999999999999999999


Q ss_pred             ecCCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          178 EKLGSSLYDFLRKNN--YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       178 e~~~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      |.|..+|.++++...  .........+.+..|++.||+|||+.+||||||||.||||....                   
T Consensus       583 ELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~-------------------  643 (903)
T KOG1027|consen  583 ELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPS-------------------  643 (903)
T ss_pred             hHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccC-------------------
Confidence            999999999998741  11112245678899999999999999999999999999996521                   


Q ss_pred             cccCCCCCCEEEEecCCccccCCCCC------ceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhC-CCCCCCCCh
Q 013973          256 FKRMPKSSAIKVIDFGSTTYERPDQN------YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG-EALFQTHEN  328 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg-~~Pf~~~~~  328 (433)
                         .+....++|+|||++.....+.+      ...||-+|+|||++....-+.++||+||||++|+.++| ..||...-.
T Consensus       644 ---~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~  720 (903)
T KOG1027|consen  644 ---ADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLE  720 (903)
T ss_pred             ---CCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHH
Confidence               03445677777777765554432      34699999999999998888899999999999999996 899975322


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      .+  ..|                       ..|..+                ...+.       +....++.|||.+||+
T Consensus       721 R~--~NI-----------------------l~~~~~----------------L~~L~-------~~~d~eA~dLI~~ml~  752 (903)
T KOG1027|consen  721 RQ--ANI-----------------------LTGNYT----------------LVHLE-------PLPDCEAKDLISRMLN  752 (903)
T ss_pred             hh--hhh-----------------------hcCccc----------------eeeec-------cCchHHHHHHHHHhcC
Confidence            11  110                       111110                00000       0111178999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCC
Q 013973          409 YDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       409 ~dP~~R~ta~ell~hp~f~~~  429 (433)
                      .+|..||+|.+||.||||=..
T Consensus       753 ~dP~~RPsa~~VL~HPlFW~~  773 (903)
T KOG1027|consen  753 PDPQLRPSATDVLNHPLFWDS  773 (903)
T ss_pred             CCcccCCCHHHHhCCCccCCh
Confidence            999999999999999999544

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=100.00  E-value=6.1e-35  Score=269.01  Aligned_cols=238  Identities=36%  Similarity=0.597  Sum_probs=189.4

Q ss_pred             ccEEEEEEEECCCCeEEEEEEeecchhh--HHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecC-CCCHH
Q 013973          109 TFGQVLECWDRERKEMVAIKIVRGIKKY--REAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLY  185 (433)
Q Consensus       109 ~~g~V~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~-~~~L~  185 (433)
                      +||.||+|....+++.+|+|++......  .+.+..|+..++.+     .|++++++.+.+......++|||++ +++|.
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-----~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~   75 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKL-----KHPNIVRLYDVFEDEDKLYLVMEYCDGGDLF   75 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhC-----CCCcHHHHHhheeeCCEEEEEEeCCCCCCHH
Confidence            5899999999988999999998643221  46777888888888     6688999999999999999999999 66999


Q ss_pred             HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCE
Q 013973          186 DFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI  265 (433)
Q Consensus       186 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~  265 (433)
                      +++....  .+++..+..++.+++.+|.|||+.+|+|+||+|+||+++.                           ++.+
T Consensus        76 ~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~---------------------------~~~~  126 (244)
T smart00220       76 DLLKKRG--RLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDE---------------------------DGHV  126 (244)
T ss_pred             HHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECC---------------------------CCcE
Confidence            9997754  3899999999999999999999999999999999999954                           3456


Q ss_pred             EEEecCCccccCCC--CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCC
Q 013973          266 KVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE-HLAMMERVLGPL  342 (433)
Q Consensus       266 kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~-~~~~i~~~~~~~  342 (433)
                      +|+|||.+......  .....|+..|++||.+.+..++.++|+||||+++|+|++|..||......+ ....+.      
T Consensus       127 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~------  200 (244)
T smart00220      127 KLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIG------  200 (244)
T ss_pred             EEccccceeeeccccccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHh------
Confidence            66777766544332  233468889999999998889999999999999999999999997733322 222111      


Q ss_pred             CHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhc
Q 013973          343 PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       343 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                                       .+......                       ....++.++.+++.+||..||++||++.++++
T Consensus       201 -----------------~~~~~~~~-----------------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      201 -----------------KPKPPFPP-----------------------PEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             -----------------ccCCCCcc-----------------------ccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence                             11000000                       00015668999999999999999999999999


Q ss_pred             CCCC
Q 013973          423 HPFF  426 (433)
Q Consensus       423 hp~f  426 (433)
                      ||||
T Consensus       241 ~~~~  244 (244)
T smart00220      241 HPFF  244 (244)
T ss_pred             CCCC
Confidence            9997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-35  Score=291.33  Aligned_cols=245  Identities=22%  Similarity=0.301  Sum_probs=199.4

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCC-C--eEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRER-K--EMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~-~--~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      ++..+.++||+|.||.|++|.+... |  ..||||+++...  .....+.+|+.+|.++     .|+|++++|+...+ .
T Consensus       110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L-----~H~hliRLyGvVl~-q  183 (1039)
T KOG0199|consen  110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKL-----QHPHLIRLYGVVLD-Q  183 (1039)
T ss_pred             HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhc-----cCcceeEEeeeecc-c
Confidence            3467889999999999999988643 2  358999997432  2467789999999998     77899999999887 7


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+.||||++ .|+|.+.|++-....|.......|+.||+.|+.||.++++|||||...|||+.+...             
T Consensus       184 p~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprt-------------  250 (1039)
T KOG0199|consen  184 PAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRT-------------  250 (1039)
T ss_pred             hhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccce-------------
Confidence            788999999 999999999855567899999999999999999999999999999999999965444             


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCCCcee------ecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV------STRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALF  323 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~------gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf  323 (433)
                                    +||+|||+.+-.......++      -...|+|||.+....++.++|||+|||++|||++ |..||
T Consensus       251 --------------VKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW  316 (1039)
T KOG0199|consen  251 --------------VKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPW  316 (1039)
T ss_pred             --------------eeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCC
Confidence                          55555555554433332221      2457999999999999999999999999999999 88999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      .+....+++..|.+.                      ..+                          ..+..++.++.+++
T Consensus       317 ~G~~g~qIL~~iD~~----------------------erL--------------------------pRPk~csedIY~im  348 (1039)
T KOG0199|consen  317 VGCRGIQILKNIDAG----------------------ERL--------------------------PRPKYCSEDIYQIM  348 (1039)
T ss_pred             CCCCHHHHHHhcccc----------------------ccC--------------------------CCCCCChHHHHHHH
Confidence            999888777654311                      111                          12457889999999


Q ss_pred             HhccccCCCCCCCHHHHhc
Q 013973          404 QGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~  422 (433)
                      ..||..+|.+|||...|.+
T Consensus       349 k~cWah~paDRptFsair~  367 (1039)
T KOG0199|consen  349 KNCWAHNPADRPTFSAIRE  367 (1039)
T ss_pred             HHhccCCccccccHHHHHH
Confidence            9999999999999887753

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=100.00  E-value=8.7e-36  Score=287.35  Aligned_cols=197  Identities=28%  Similarity=0.486  Sum_probs=174.5

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHH---------HHHHHHHHHHHhcCCCCCceEEeccee
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAA---------MIEIEVLQQLAKHDKGGNRCVQIRNWF  167 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~---------~~E~~~l~~l~~~~~~~~~i~~~~~~~  167 (433)
                      .+|..++.+|.|+||.|++|.++.+...|+||.+.+..-..+.+         -.|+.||..+..|  .|+||++++++|
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~--sH~NIlKlLdfF  638 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKH--SHENILKLLDFF  638 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhc--Cccchhhhhhee
Confidence            45999999999999999999999999999999997654333333         3599999999654  579999999999


Q ss_pred             ecCCeEEEEEecC--CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcC
Q 013973          168 DYRNHICIVFEKL--GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  245 (433)
Q Consensus       168 ~~~~~~~lV~e~~--~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~  245 (433)
                      ++++++||+||.-  |-+|++++.-..  .+++.++.-|+.||+.|+++||++||||||||-+||.+             
T Consensus       639 Eddd~yyl~te~hg~gIDLFd~IE~kp--~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenviv-------------  703 (772)
T KOG1152|consen  639 EDDDYYYLETEVHGEGIDLFDFIEFKP--RMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIV-------------  703 (772)
T ss_pred             ecCCeeEEEecCCCCCcchhhhhhccC--ccchHHHHHHHHHHHhccccccccCceecccccccEEE-------------
Confidence            9999999999987  679999998765  89999999999999999999999999999999999999             


Q ss_pred             CCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-CceeecCcccchhhhhCCCC-CCcchhHHHHHHHHHHHhCCCCC
Q 013973          246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALF  323 (433)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~Pf  323 (433)
                                    +.++.+||+|||.+.....+. ..++||..|.|||++.+.+| +..-|||++|++||.++....||
T Consensus       704 --------------d~~g~~klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpy  769 (772)
T KOG1152|consen  704 --------------DSNGFVKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPY  769 (772)
T ss_pred             --------------ecCCeEEEeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCC
Confidence                          567789999999987665544 56799999999999999987 47789999999999999999998


Q ss_pred             C
Q 013973          324 Q  324 (433)
Q Consensus       324 ~  324 (433)
                      .
T Consensus       770 y  770 (772)
T KOG1152|consen  770 Y  770 (772)
T ss_pred             c
Confidence            5

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=1.4e-34  Score=318.91  Aligned_cols=187  Identities=20%  Similarity=0.279  Sum_probs=154.4

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  176 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV  176 (433)
                      ..|...+.||+|+||.||+|.+..++..||+|.++....   ....|+++++++     +||||+++++++.+.+..|+|
T Consensus       690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~l~~l-----~HpnIv~~~~~~~~~~~~~lv  761 (968)
T PLN00113        690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS---IPSSEIADMGKL-----QHPNIVKLIGLCRSEKGAYLI  761 (968)
T ss_pred             hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc---ccHHHHHHHhhC-----CCCCcceEEEEEEcCCCCEEE
Confidence            346677899999999999999999999999998864332   123457777777     779999999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          177 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH---DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       177 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      |||+ +|+|.++++     .+++..+..++.||+.||+|||   +.+|+||||||+||+++.++                
T Consensus       762 ~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~----------------  820 (968)
T PLN00113        762 HEYIEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKD----------------  820 (968)
T ss_pred             EeCCCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCC----------------
Confidence            9999 999999995     3889999999999999999999   66999999999999995433                


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  325 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~  325 (433)
                                 ..++. ||........ ....||+.|||||++.+..|+.++|||||||++|||++|+.||..
T Consensus       821 -----------~~~~~-~~~~~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~  880 (968)
T PLN00113        821 -----------EPHLR-LSLPGLLCTD-TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADA  880 (968)
T ss_pred             -----------ceEEE-eccccccccC-CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCc
Confidence                       33333 4433322111 223688999999999999999999999999999999999999953

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=100.00  E-value=8.9e-34  Score=241.85  Aligned_cols=210  Identities=21%  Similarity=0.401  Sum_probs=167.3

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      +...-+..||+|+||.|-+-++..+|...|+|.++..  .+...+...|+.+..+.    ...|.+|.+++.+-..+.++
T Consensus        46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~----~~CPf~V~FyGa~~regdvw  121 (282)
T KOG0984|consen   46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRT----VDCPFTVHFYGALFREGDVW  121 (282)
T ss_pred             hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccC----CCCCeEEEeehhhhccccEE
Confidence            4466678999999999999999999999999998743  33445555666665443    35688999999998899999


Q ss_pred             EEEecCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          175 IVFEKLGSSLYDFLRK--NNYRSFPIDLVREIARQLLECIAFMHDL-CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       175 lV~e~~~~~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      |.||.|..+|..+-.+  ..+..+++..+-+|+..|+.||.|||++ .|||||+||+||||                   
T Consensus       122 IcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLI-------------------  182 (282)
T KOG0984|consen  122 ICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILI-------------------  182 (282)
T ss_pred             EeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEE-------------------
Confidence            9999998888766432  1224799999999999999999999975 69999999999999                   


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCC-Cc-eeecCcccchhhhhC----CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NY-IVSTRHYRAPEVILG----LGWTYPCDIWSVGCILVELCTGEALFQT  325 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~-~~gt~~y~aPE~~~~----~~~~~~~DvwSlGv~l~elltg~~Pf~~  325 (433)
                              +..+++|+||||++....+.- .+ ..|.-.|||||.+..    ..|+.++||||||+.+.||.+++.||..
T Consensus       183 --------n~~GqVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~  254 (282)
T KOG0984|consen  183 --------NYDGQVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES  254 (282)
T ss_pred             --------ccCCcEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence                    556678888888776544332 22 468899999999864    3699999999999999999999999975


Q ss_pred             -CChHHHHHHHHH
Q 013973          326 -HENLEHLAMMER  337 (433)
Q Consensus       326 -~~~~~~~~~i~~  337 (433)
                       .+..+++.++.+
T Consensus       255 w~tpF~qLkqvVe  267 (282)
T KOG0984|consen  255 WGTPFQQLKQVVE  267 (282)
T ss_pred             cCCHHHHHHHHhc
Confidence             455566655443

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=2.2e-34  Score=309.68  Aligned_cols=200  Identities=19%  Similarity=0.228  Sum_probs=155.7

Q ss_pred             CeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          171 NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       171 ~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      ..++++||+++++|.++|.... ..+++.+++.++.||+.||+|||++|||||||||+||||+..|.++++|||++....
T Consensus        53 ~~~~~~~e~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~  131 (793)
T PLN00181         53 DSIVRALECEDVSLRQWLDNPD-RSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG  131 (793)
T ss_pred             chhhhhhccCCccHHHHHhccc-ccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCccc
Confidence            4678889999999999997543 469999999999999999999999999999999999999999999999999876542


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCC-------------------CCceeecCcccchhhhhCCCCCCcchhHHHHH
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPD-------------------QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGC  311 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv  311 (433)
                      .        +.+..+|++|||+++.....                   ....+||+.|||||++.+..|+.++|||||||
T Consensus       132 ~--------~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGv  203 (793)
T PLN00181        132 S--------DEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGV  203 (793)
T ss_pred             c--------cccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHH
Confidence            2        34567999999998642210                   01136899999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhh
Q 013973          312 ILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH  391 (433)
Q Consensus       312 ~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (433)
                      +||||++|.+|+....  .....+...  ..|..                                              
T Consensus       204 iL~ELl~~~~~~~~~~--~~~~~~~~~--~~~~~----------------------------------------------  233 (793)
T PLN00181        204 LLFELFCPVSSREEKS--RTMSSLRHR--VLPPQ----------------------------------------------  233 (793)
T ss_pred             HHHHHhhCCCchhhHH--HHHHHHHHh--hcChh----------------------------------------------
Confidence            9999999988875321  111111000  00000                                              


Q ss_pred             cCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          392 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       392 ~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      .....+...+++.+||+.||.+||++.|+|+||||...
T Consensus       234 ~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~  271 (793)
T PLN00181        234 ILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP  271 (793)
T ss_pred             hhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence            00112345688999999999999999999999999753

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=3.8e-35  Score=287.18  Aligned_cols=257  Identities=24%  Similarity=0.391  Sum_probs=206.6

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      .++|+++..+|.|+||.||+|+++.+++..|+|+++-.. ........|+-+++.+     .|+||+.+++.+.....++
T Consensus        14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc-----~h~nivay~gsylr~dklw   88 (829)
T KOG0576|consen   14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDC-----RHPNIVAYFGSYLRRDKLW   88 (829)
T ss_pred             ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecC-----CCcChHHHHhhhhhhcCcE
Confidence            367999999999999999999999999999999997432 2344556688888777     6799999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      ++|||| ||+|.+.-+..+  ++++.++....++.+.||+|||++|-+|||||-.|||+++.|.                
T Consensus        89 icMEycgggslQdiy~~Tg--plselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gD----------------  150 (829)
T KOG0576|consen   89 ICMEYCGGGSLQDIYHVTG--PLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGD----------------  150 (829)
T ss_pred             EEEEecCCCcccceeeecc--cchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCc----------------
Confidence            999999 889988776665  8999999999999999999999999999999999999976654                


Q ss_pred             cccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhh---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                                 +|++|||.+......   ...+.||+.|||||+..   ...|...+|+|++|+...|+-.-++|--..-
T Consensus       151 -----------vklaDfgvsaqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlh  219 (829)
T KOG0576|consen  151 -----------VKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLH  219 (829)
T ss_pred             -----------eeecccCchhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccc
Confidence                       555555554433321   23458999999999885   4569999999999999999988888765555


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      .+..+..+.+.....|. .                                           ......++-+.+|++.+|
T Consensus       220 pmr~l~LmTkS~~qpp~-l-------------------------------------------kDk~kws~~fh~fvK~al  255 (829)
T KOG0576|consen  220 PMRALFLMTKSGFQPPT-L-------------------------------------------KDKTKWSEFFHNFVKGAL  255 (829)
T ss_pred             hHHHHHHhhccCCCCCc-c-------------------------------------------cCCccchHHHHHHHHHHh
Confidence            55555444333222221 0                                           012345678999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCC
Q 013973          408 RYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       408 ~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      .+||++||+++.+|+|||.+...
T Consensus       256 tknpKkRptaeklL~h~fvs~~l  278 (829)
T KOG0576|consen  256 TKNPKKRPTAEKLLQHPFVSQTL  278 (829)
T ss_pred             cCCCccCCChhhheeceeeccch
Confidence            99999999999999999998763

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-32  Score=285.99  Aligned_cols=248  Identities=25%  Similarity=0.411  Sum_probs=195.8

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECC-------CCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecce
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRE-------RKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  166 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~-------~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~  166 (433)
                      .++.++.+.||+|.||.|++|....       ....||||.++..  ....+.+..|+++|+.+.    .|+|++.+.+.
T Consensus       295 ~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g----~H~niv~llG~  370 (609)
T KOG0200|consen  295 RENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELG----KHPNIVNLLGA  370 (609)
T ss_pred             hhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhc----CCcchhhheee
Confidence            3455777899999999999997531       1456999998732  345677888999999985    45789999999


Q ss_pred             eecCCeEEEEEecC-CCCHHHHHHhcC------------C--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceE
Q 013973          167 FDYRNHICIVFEKL-GSSLYDFLRKNN------------Y--RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVL  231 (433)
Q Consensus       167 ~~~~~~~~lV~e~~-~~~L~~~l~~~~------------~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NIL  231 (433)
                      +...+.+++|+||+ .|+|.++|+.+.            .  ..++......++.||+.|++||++..+|||||-..|||
T Consensus       371 ~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVL  450 (609)
T KOG0200|consen  371 CTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVL  450 (609)
T ss_pred             eccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEE
Confidence            99999999999999 999999998764            0  13889999999999999999999999999999999999


Q ss_pred             eeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCce----ee--cCcccchhhhhCCCCCCcch
Q 013973          232 LVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI----VS--TRHYRAPEVILGLGWTYPCD  305 (433)
Q Consensus       232 l~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~----~g--t~~y~aPE~~~~~~~~~~~D  305 (433)
                      +.                           .+..+||+|||+++.......+.    .|  ...|||||.+....|+.++|
T Consensus       451 i~---------------------------~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSD  503 (609)
T KOG0200|consen  451 IT---------------------------KNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSD  503 (609)
T ss_pred             ec---------------------------CCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccch
Confidence            94                           45567777777777544433332    12  23499999999999999999


Q ss_pred             hHHHHHHHHHHHh-CCCCCCCCC-hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchh
Q 013973          306 IWSVGCILVELCT-GEALFQTHE-NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR  383 (433)
Q Consensus       306 vwSlGv~l~ellt-g~~Pf~~~~-~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (433)
                      ||||||+|||+.+ |..||.+-. ..+.+.                       +++.|..                    
T Consensus       504 VWSfGI~L~EifsLG~~PYp~~~~~~~l~~-----------------------~l~~G~r--------------------  540 (609)
T KOG0200|consen  504 VWSFGILLWEIFTLGGTPYPGIPPTEELLE-----------------------FLKEGNR--------------------  540 (609)
T ss_pred             hhHHHHHHHHHhhCCCCCCCCCCcHHHHHH-----------------------HHhcCCC--------------------
Confidence            9999999999999 889998743 222211                       2333322                    


Q ss_pred             HHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhc
Q 013973          384 LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       384 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                           .+.|..++.++.++++.||+.+|++||+..|+.+
T Consensus       541 -----~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~  574 (609)
T KOG0200|consen  541 -----MEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE  574 (609)
T ss_pred             -----CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence                 1223467889999999999999999999988754

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.98  E-value=2.3e-32  Score=272.76  Aligned_cols=242  Identities=21%  Similarity=0.271  Sum_probs=193.3

Q ss_pred             EEEEeeeeccccEEEEEEEECCCCe----EEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           99 YKIHSKMGEGTFGQVLECWDRERKE----MVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~~~----~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      .+..++||+|+||+||+|.....|+    .||||++...  .+...++..|+-+|..+     .|+|++++++++.... 
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masl-----dHpnl~RLLgvc~~s~-  771 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASL-----DHPNLLRLLGVCMLST-  771 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcC-----CCchHHHHhhhcccch-
Confidence            4566899999999999998865554    5899988643  23356678888888888     8899999999988765 


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +-||++|+ +|+|.||++... ..+.....+.|..||++||.|||.+++|||||-..|||+.+..               
T Consensus       772 ~qlvtq~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~---------------  835 (1177)
T KOG1025|consen  772 LQLVTQLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPN---------------  835 (1177)
T ss_pred             HHHHHHhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCC---------------
Confidence            88999999 999999998754 5788999999999999999999999999999999999995544               


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCCCce-----eecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI-----VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQT  325 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~-----~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~  325 (433)
                                  .+||.|||+++...++...+     .-.+.|||-|.+....|+.++|||||||++||++| |..|+.+
T Consensus       836 ------------hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~g  903 (1177)
T KOG1025|consen  836 ------------HVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDG  903 (1177)
T ss_pred             ------------eEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCC
Confidence                        56666666666554443221     12567999999999999999999999999999999 9999988


Q ss_pred             CChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHh
Q 013973          326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  405 (433)
Q Consensus       326 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  405 (433)
                      ....++-..                       +++|..                         ...++.++-++.-++.+
T Consensus       904 i~~~eI~dl-----------------------le~geR-------------------------LsqPpiCtiDVy~~mvk  935 (1177)
T KOG1025|consen  904 IPAEEIPDL-----------------------LEKGER-------------------------LSQPPICTIDVYMVMVK  935 (1177)
T ss_pred             CCHHHhhHH-----------------------Hhcccc-------------------------CCCCCCccHHHHHHHHH
Confidence            766554332                       222211                         12345778889999999


Q ss_pred             ccccCCCCCCCHHHHhc
Q 013973          406 LLRYDPTDRLTAREALR  422 (433)
Q Consensus       406 ~L~~dP~~R~ta~ell~  422 (433)
                      ||..|+..||+++++..
T Consensus       936 Cwmid~~~rp~fkel~~  952 (1177)
T KOG1025|consen  936 CWMIDADSRPTFKELAE  952 (1177)
T ss_pred             HhccCcccCccHHHHHH
Confidence            99999999999987753

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.4e-32  Score=242.01  Aligned_cols=201  Identities=25%  Similarity=0.357  Sum_probs=162.9

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecc-eeecCCeE
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN-WFDYRNHI  173 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~-~~~~~~~~  173 (433)
                      +.+.|.|.+.||+|-||.+-+|+++.++..+++|.+.........+.+|..---.|    .+|.||+.-|+ .|++.+.+
T Consensus        22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~L----s~H~hIi~tY~vaFqt~d~Y   97 (378)
T KOG1345|consen   22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFL----SPHQHIIDTYEVAFQTSDAY   97 (378)
T ss_pred             hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceee----ccchhhhHHHHHHhhcCceE
Confidence            45679999999999999999999999999999999875555556666666543333    34455666555 58889999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      ++++||+ -|+|..-+...+   +.+.....++.|+++||.|||+.++||||||.+||||-.                  
T Consensus        98 vF~qE~aP~gdL~snv~~~G---igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~------------------  156 (378)
T KOG1345|consen   98 VFVQEFAPRGDLRSNVEAAG---IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFD------------------  156 (378)
T ss_pred             EEeeccCccchhhhhcCccc---ccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEec------------------
Confidence            9999999 899998887654   889999999999999999999999999999999999943                  


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCC-----CCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-----GWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                             ....++||||||.++..+..-...--+..|.+||+....     ...+.+|+|.||+++|.++||.+||+...
T Consensus       157 -------~df~rvKlcDFG~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~  229 (378)
T KOG1345|consen  157 -------ADFYRVKLCDFGLTRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKAS  229 (378)
T ss_pred             -------CCccEEEeeecccccccCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhh
Confidence                   223489999999988655443334456789999988642     25688999999999999999999998543

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.97  E-value=8.6e-30  Score=228.84  Aligned_cols=208  Identities=39%  Similarity=0.620  Sum_probs=176.9

Q ss_pred             eeccccEEEEEEEECCCCeEEEEEEeecchh--hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecC-C
Q 013973          105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-G  181 (433)
Q Consensus       105 iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~-~  181 (433)
                      ||+|++|.||++.+..+++.+++|++.....  ..+.+..|+..++.+     .+++++++++.+......++|||++ +
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l-----~~~~i~~~~~~~~~~~~~~~~~e~~~~   75 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKL-----NHPNIVKLYGVFEDENHLYLVMEYCEG   75 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhc-----CCCCeeeEeeeeecCCeEEEEEecCCC
Confidence            6899999999999988899999999975433  246678899999988     4478999999999999999999999 6


Q ss_pred             CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccCCC
Q 013973          182 SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPK  261 (433)
Q Consensus       182 ~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~  261 (433)
                      ++|.+++.... ..+++..+..++.+++.+|.+||+.|++|+||+|.||+++.                          .
T Consensus        76 ~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~--------------------------~  128 (215)
T cd00180          76 GSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDS--------------------------D  128 (215)
T ss_pred             CcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeC--------------------------C
Confidence            99999998652 36899999999999999999999999999999999999953                          1


Q ss_pred             CCCEEEEecCCccccCCC---CCceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 013973          262 SSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER  337 (433)
Q Consensus       262 ~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~i~~  337 (433)
                      ...++|+|||.+......   .....+...|++||.+... .++.++|+|++|+++++|             .       
T Consensus       129 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------~-------  188 (215)
T cd00180         129 NGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------P-------  188 (215)
T ss_pred             CCcEEEecCCceEEccCCcchhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------H-------
Confidence            456777777777654433   2334678899999999887 788999999999999998             0       


Q ss_pred             HhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCH
Q 013973          338 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA  417 (433)
Q Consensus       338 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta  417 (433)
                                                                                  .+.+++.+||+.||++||++
T Consensus       189 ------------------------------------------------------------~~~~~l~~~l~~~p~~R~~~  208 (215)
T cd00180         189 ------------------------------------------------------------ELKDLIRKMLQKDPEKRPSA  208 (215)
T ss_pred             ------------------------------------------------------------HHHHHHHHHhhCCcccCcCH
Confidence                                                                        36778999999999999999


Q ss_pred             HHHhcCC
Q 013973          418 REALRHP  424 (433)
Q Consensus       418 ~ell~hp  424 (433)
                      .++++|+
T Consensus       209 ~~l~~~~  215 (215)
T cd00180         209 KEILEHL  215 (215)
T ss_pred             HHHhhCC
Confidence            9999885

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.97  E-value=3.3e-29  Score=228.54  Aligned_cols=193  Identities=36%  Similarity=0.620  Sum_probs=165.0

Q ss_pred             EEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh--hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEE
Q 013973           99 YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  176 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV  176 (433)
                      |.+.+.||.|++|.||+|.+..+++.+|+|.+.....  ..+.+..|++.++.+     .+++++++++.+......+++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~-----~~~~i~~~~~~~~~~~~~~~v   75 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKL-----KHPNIVKLYGVFEDPEPLYLV   75 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhC-----CCCChhhheeeeecCCceEEE
Confidence            5678999999999999999998899999999874332  456677788888888     567899999999988999999


Q ss_pred             EecC-CCCHHHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          177 FEKL-GSSLYDFLRKNNYRS-FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       177 ~e~~-~~~L~~~l~~~~~~~-l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      +|++ +++|.+++....  . +++..+..++.+++.+|.+||+.+++|+||+|+||+++                     
T Consensus        76 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~---------------------  132 (225)
T smart00221       76 MEYCEGGDLFDYLRKKG--GKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLG---------------------  132 (225)
T ss_pred             EeccCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---------------------
Confidence            9999 669999998754  3 89999999999999999999999999999999999994                     


Q ss_pred             ccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhh-hCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVI-LGLGWTYPCDIWSVGCILVELCTGEALFQT  325 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGv~l~elltg~~Pf~~  325 (433)
                            .+..++|+|||.+.......    ....++..|++||.+ ....++.++|+|+||+++|+|++|+.||..
T Consensus       133 ------~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      133 ------MDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             ------CCCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence                  34567888888776544332    345788899999998 666788899999999999999999999976

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.97  E-value=4.7e-30  Score=237.70  Aligned_cols=247  Identities=17%  Similarity=0.224  Sum_probs=186.7

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCC-----eEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERK-----EMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~-----~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      ..++++.-.+-+|.||.||.|.+++..     +.|-+|.++...  .....+..|.-.+.     ...|+|+..+.+...
T Consensus       283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly-----~~sH~nll~V~~V~i  357 (563)
T KOG1024|consen  283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLY-----GASHPNLLSVLGVSI  357 (563)
T ss_pred             hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHh-----cCcCCCccceeEEEe
Confidence            467888899999999999999776433     234445443211  11122222333332     236888988888764


Q ss_pred             -cCCeEEEEEecC-CCCHHHHHHhc------CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCcccc
Q 013973          169 -YRNHICIVFEKL-GSSLYDFLRKN------NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKV  240 (433)
Q Consensus       169 -~~~~~~lV~e~~-~~~L~~~l~~~------~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i  240 (433)
                       +....++++.++ -|+|..||...      +.+.++..+...++.|++.|++|||+.||||.||...|++|        
T Consensus       358 e~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvI--------  429 (563)
T KOG1024|consen  358 EDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVI--------  429 (563)
T ss_pred             eccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhccee--------
Confidence             455677888888 68999999832      22457777888999999999999999999999999999999        


Q ss_pred             CCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceee-----cCcccchhhhhCCCCCCcchhHHHHHHHHH
Q 013973          241 PDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVS-----TRHYRAPEVILGLGWTYPCDIWSVGCILVE  315 (433)
Q Consensus       241 ~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~g-----t~~y~aPE~~~~~~~~~~~DvwSlGv~l~e  315 (433)
                                         ++..++||+|-.+++..-+.+....|     ...||+||.+....|+.++|+|||||+|||
T Consensus       430 -------------------dd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWE  490 (563)
T KOG1024|consen  430 -------------------DDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWE  490 (563)
T ss_pred             -------------------hhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHH
Confidence                               56688999998888866655544334     567999999999999999999999999999


Q ss_pred             HHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCC
Q 013973          316 LCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH  394 (433)
Q Consensus       316 llt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (433)
                      |+| |+.||..-+..+....+                       .+|..                         ...|-+
T Consensus       491 Lmtlg~~PyaeIDPfEm~~yl-----------------------kdGyR-------------------------laQP~N  522 (563)
T KOG1024|consen  491 LMTLGKLPYAEIDPFEMEHYL-----------------------KDGYR-------------------------LAQPFN  522 (563)
T ss_pred             HHhcCCCCccccCHHHHHHHH-----------------------hccce-------------------------ecCCCC
Confidence            998 99999887776655443                       22211                         112347


Q ss_pred             chhHHHHHHHhccccCCCCCCCHHHHhc
Q 013973          395 SAGDLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       395 ~~~~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                      ++.++..++..||..+|++||+.+|+..
T Consensus       523 CPDeLf~vMacCWallpeeRPsf~Qlv~  550 (563)
T KOG1024|consen  523 CPDELFTVMACCWALLPEERPSFSQLVI  550 (563)
T ss_pred             CcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence            8889999999999999999999999864

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.96  E-value=3.8e-29  Score=220.26  Aligned_cols=167  Identities=23%  Similarity=0.300  Sum_probs=123.7

Q ss_pred             CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccCCC
Q 013973          182 SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPK  261 (433)
Q Consensus       182 ~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~  261 (433)
                      |+|.+++...+ ..+++.++..++.||+.||.|||+++      ||+|||++.                           
T Consensus         1 GsL~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~---------------------------   46 (176)
T smart00750        1 VSLADILEVRG-RPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTW---------------------------   46 (176)
T ss_pred             CcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcC---------------------------
Confidence            68999998653 46999999999999999999999999      999999954                           


Q ss_pred             CCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhC
Q 013973          262 SSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE-HLAMMERVLG  340 (433)
Q Consensus       262 ~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~-~~~~i~~~~~  340 (433)
                      ++.+|+  ||.+.......  ..||+.|||||++.+..|+.++|||||||++|||++|..||....... .+..+.....
T Consensus        47 ~~~~~~--fG~~~~~~~~~--~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~  122 (176)
T smart00750       47 DGLLKL--DGSVAFKTPEQ--SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMP  122 (176)
T ss_pred             ccceee--ccceEeecccc--CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhc
Confidence            445666  77665443322  268999999999999999999999999999999999999997543321 1211111110


Q ss_pred             CCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCch--hHHHHHHHhccccCCCCCCCHH
Q 013973          341 PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA--GDLTHLLQGLLRYDPTDRLTAR  418 (433)
Q Consensus       341 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~li~~~L~~dP~~R~ta~  418 (433)
                      ...                      +....                    .....+  .++.+||.+||+.||.+||++.
T Consensus       123 ~~~----------------------~~~~~--------------------~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~  160 (176)
T smart00750      123 ADD----------------------PRDRS--------------------NLESVSAARSFADFMRVCASRLPQRREAAN  160 (176)
T ss_pred             cCC----------------------ccccc--------------------cHHHHHhhhhHHHHHHHHHhcccccccCHH
Confidence            000                      00000                    000112  2689999999999999999999


Q ss_pred             HHhcCCCCCC
Q 013973          419 EALRHPFFTR  428 (433)
Q Consensus       419 ell~hp~f~~  428 (433)
                      |+++|+|+..
T Consensus       161 ~ll~~~~~~~  170 (176)
T smart00750      161 HYLAHCRALF  170 (176)
T ss_pred             HHHHHHHHHH
Confidence            9999998753

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.96  E-value=1.8e-28  Score=223.11  Aligned_cols=203  Identities=25%  Similarity=0.337  Sum_probs=176.3

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  176 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV  176 (433)
                      -.|++.++||+|+||..++|.+..+++.||||.-. .+....+...|....+.|..    .+.|.+.+.+-+++.+-.||
T Consensus        28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEP-rkS~APQLrdEYr~YKlL~g----~~GIP~vYYFGqeG~~NiLV  102 (449)
T KOG1165|consen   28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEP-RKSEAPQLRDEYRTYKLLGG----TEGIPQVYYFGQEGKYNILV  102 (449)
T ss_pred             ccceeccccccCcceeeecccccccCceEEEEecc-ccCCcchHHHHHHHHHHHcC----CCCCCceeeeccccchhhhh
Confidence            35999999999999999999999999999999754 34445667788888888853    35688888888888899999


Q ss_pred             EecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCccc
Q 013973          177 FEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  256 (433)
Q Consensus       177 ~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~  256 (433)
                      +|++|.+|.|++.-++ ++|+...+..++.|++.-++|+|++.+|+|||||+|+||...+.                   
T Consensus       103 idLLGPSLEDLFD~Cg-R~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~-------------------  162 (449)
T KOG1165|consen  103 IDLLGPSLEDLFDLCG-RRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGT-------------------  162 (449)
T ss_pred             hhhhCcCHHHHHHHhc-CcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCC-------------------
Confidence            9999999999988776 68999999999999999999999999999999999999965442                   


Q ss_pred             ccCCCCCCEEEEecCCccccCCCCC----------ceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          257 KRMPKSSAIKVIDFGSTTYERPDQN----------YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       257 ~~~~~~~~~kl~Dfg~a~~~~~~~~----------~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                         .....+.|+|||+|....+..+          ...||..||+-..-.+...+.+.|+=|||-++++.|-|.+||++.
T Consensus       163 ---k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGL  239 (449)
T KOG1165|consen  163 ---KDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL  239 (449)
T ss_pred             ---CCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccc
Confidence               4456789999999987665432          357999999999999999999999999999999999999999875


Q ss_pred             C
Q 013973          327 E  327 (433)
Q Consensus       327 ~  327 (433)
                      .
T Consensus       240 K  240 (449)
T KOG1165|consen  240 K  240 (449)
T ss_pred             c
Confidence            4

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.95  E-value=6.5e-27  Score=226.01  Aligned_cols=208  Identities=29%  Similarity=0.361  Sum_probs=170.2

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCC-eEEEEEEeecchh-hHHHHHHHHHHHHHHHhcCCCCCceEEeccee-ecCCeEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKK-YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF-DYRNHIC  174 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~-~~vAiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~-~~~~~~~  174 (433)
                      +|.+.++||+|+||.||+|.+..++ ..+|+|+...... ....+..|..++..+.. ..+..++..++... ......+
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~-~~~~~~~~~~~~~G~~~~~~~~   97 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEK-KNGPSHFPKLLDHGRSTEDFNF   97 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhh-hcCCCCCCEEEEeccCCCceeE
Confidence            7999999999999999999988775 6799998864322 12267789999999975 22345677888777 5788999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          175 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       175 lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      |||+.+|.+|.++......+.|+...+..++.|++.+|++||+.|+|||||||+|+++...+.                 
T Consensus        98 iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~-----------------  160 (322)
T KOG1164|consen   98 IVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSR-----------------  160 (322)
T ss_pred             EEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCC-----------------
Confidence            999999999999887665678999999999999999999999999999999999999953210                 


Q ss_pred             ccccCCCCCCEEEEecCCcc--ccC-C-------C---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCC
Q 013973          255 YFKRMPKSSAIKVIDFGSTT--YER-P-------D---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA  321 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~--~~~-~-------~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~  321 (433)
                           .....+.|.|||+++  ... .       .   .....||..|+++....+...+.+.|+||++.++.+++.|..
T Consensus       161 -----~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~L  235 (322)
T KOG1164|consen  161 -----SEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSL  235 (322)
T ss_pred             -----cccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCC
Confidence                 112468888888887  210 1       1   123469999999999999999999999999999999999999


Q ss_pred             CCCCCCh
Q 013973          322 LFQTHEN  328 (433)
Q Consensus       322 Pf~~~~~  328 (433)
                      ||...+.
T Consensus       236 PW~~~~~  242 (322)
T KOG1164|consen  236 PWEALEM  242 (322)
T ss_pred             CCccccc
Confidence            9977654

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.95  E-value=4.6e-28  Score=211.51  Aligned_cols=205  Identities=26%  Similarity=0.368  Sum_probs=171.9

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ..++|.++++||+|+||.+|+|....+|+.||||+-.... ......-|..+...+++.    ..|..+..+..+..+-.
T Consensus        13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-~hpqL~yEskvY~iL~~g----~GiP~i~~y~~e~~ynv   87 (341)
T KOG1163|consen   13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-KHPQLLYESKVYRILQGG----VGIPHIRHYGTEKDYNV   87 (341)
T ss_pred             eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-CCcchhHHHHHHHHhccC----CCCchhhhhccccccce
Confidence            4578999999999999999999999999999999876433 334567788888888653    34666777778888999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          175 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       175 lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      +||+.+|.+|.+++.-.. +.|+...++-++-|++.-++|+|.++.|||||||+|+|+.-.                   
T Consensus        88 lVMdLLGPsLEdLfnfC~-R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlg-------------------  147 (341)
T KOG1163|consen   88 LVMDLLGPSLEDLFNFCS-RRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLG-------------------  147 (341)
T ss_pred             eeeeccCccHHHHHHHHh-hhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccc-------------------
Confidence            999999999999987654 579999999999999999999999999999999999999321                   


Q ss_pred             ccccCCCCCCEEEEecCCccccCCCC----------CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPDQ----------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                           .....+.++|||++....+..          ....||..|.+-....+...+.+.|+=|+|.+|.++.-|..||+
T Consensus       148 -----rh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQ  222 (341)
T KOG1163|consen  148 -----RHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQ  222 (341)
T ss_pred             -----cccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCccc
Confidence                 234579999999997554432          23589999999888888788899999999999999999999999


Q ss_pred             CCChH
Q 013973          325 THENL  329 (433)
Q Consensus       325 ~~~~~  329 (433)
                      +....
T Consensus       223 glka~  227 (341)
T KOG1163|consen  223 GLKAA  227 (341)
T ss_pred             ccchh
Confidence            86543

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.95  E-value=1.3e-28  Score=252.96  Aligned_cols=238  Identities=27%  Similarity=0.417  Sum_probs=173.1

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  176 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV  176 (433)
                      ++|..++.|..|+||.||+++++.+.+.+|+|+=+ .+          .+++.+.. ...++.+|               
T Consensus        83 ~df~~IklisngAygavylvrh~~trqrfa~kiNk-q~----------lilRnilt-~a~npfvv---------------  135 (1205)
T KOG0606|consen   83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINK-QN----------LILRNILT-FAGNPFVV---------------  135 (1205)
T ss_pred             cccceeEeeccCCCCceeeeeccccccchhhcccc-cc----------hhhhcccc-ccCCccee---------------
Confidence            56999999999999999999999999999996432 11          11111100 01222222               


Q ss_pred             EecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCccc
Q 013973          177 FEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  256 (433)
Q Consensus       177 ~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~  256 (433)
                           |+-...+...+  .++.+.        +.+++|||+.||||||+||+|.||+.-|++|+.|||++......... 
T Consensus       136 -----gDc~tllk~~g--~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at-  199 (1205)
T KOG0606|consen  136 -----GDCATLLKNIG--PLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT-  199 (1205)
T ss_pred             -----chhhhhcccCC--CCcchh--------hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccc-
Confidence                 34444444433  455443        67899999999999999999999999999999999988766443221 


Q ss_pred             ccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 013973          257 KRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME  336 (433)
Q Consensus       257 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~i~  336 (433)
                       + -..+.++-    .++.+  ....+|||+.|+|||++..+.|++.+|||++|+++||.+.|+.||.+++.++.+.+..
T Consensus       200 -n-l~eg~I~k----~t~Ef--~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~vi  271 (1205)
T KOG0606|consen  200 -N-LKEGHIEK----DTHEF--QDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVI  271 (1205)
T ss_pred             -h-hhhcchHH----HHHHh--hhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhh
Confidence             0 01111110    11111  1234689999999999999999999999999999999999999999988888776654


Q ss_pred             HHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCC-
Q 013973          337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL-  415 (433)
Q Consensus       337 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-  415 (433)
                      ....                       .||+.                       ...++++++++|..+|+.+|..|. 
T Consensus       272 sd~i-----------------------~wpE~-----------------------dea~p~Ea~dli~~LL~qnp~~Rlg  305 (1205)
T KOG0606|consen  272 SDDI-----------------------EWPEE-----------------------DEALPPEAQDLIEQLLRQNPLCRLG  305 (1205)
T ss_pred             hhhc-----------------------ccccc-----------------------CcCCCHHHHHHHHHHHHhChHhhcc
Confidence            4332                       34432                       135678999999999999999998 


Q ss_pred             --CHHHHhcCCCCCCCCC
Q 013973          416 --TAREALRHPFFTRDHL  431 (433)
Q Consensus       416 --ta~ell~hp~f~~~~~  431 (433)
                        ++-+|.+|+||+....
T Consensus       306 t~ga~evk~h~ff~~LDw  323 (1205)
T KOG0606|consen  306 TGGALEVKQHGFFQLLDW  323 (1205)
T ss_pred             cchhhhhhhccceeeccc
Confidence              4789999999987654

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.94  E-value=2.3e-28  Score=240.23  Aligned_cols=237  Identities=24%  Similarity=0.376  Sum_probs=185.6

Q ss_pred             eeeccccEEEEEEEE---CCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEE
Q 013973          104 KMGEGTFGQVLECWD---RERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  177 (433)
Q Consensus       104 ~iG~G~~g~V~~~~~---~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~  177 (433)
                      .+|+|+||.|++++.   .+.+..||+|+.++..   ..+.....|..++..+    ..++.++.+...++.+..+++++
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~----~~~~f~v~lhyafqt~~kl~l~l   76 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFV----HNTPFLVKLHYAFQTDGKLYLIL   76 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhc----cCCCceeeeeeeeccccchhHhh
Confidence            379999999997743   4567889999886321   1111334566666666    24688999999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCccc
Q 013973          178 EKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  256 (433)
Q Consensus       178 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~  256 (433)
                      ++. ||+|...+.+..  .+++.....+..+++.+++++|+.+|+|||+|++||+++.+|++++.||             
T Consensus        77 d~~rgg~lft~l~~~~--~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdf-------------  141 (612)
T KOG0603|consen   77 DFLRGGDLFTRLSKEV--MFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDF-------------  141 (612)
T ss_pred             hhcccchhhhccccCC--chHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCc-------------
Confidence            999 889998887654  7889999999999999999999999999999999999966665555555             


Q ss_pred             ccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 013973          257 KRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME  336 (433)
Q Consensus       257 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~i~  336 (433)
                                    |.++..-..... |||..|||||++.  ....++|+||||++++||++|..||.+    +....|.
T Consensus       142 --------------glske~v~~~~~-cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il  200 (612)
T KOG0603|consen  142 --------------GLSKEAVKEKIA-CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRIL  200 (612)
T ss_pred             --------------hhhhHhHhhhhc-ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHh
Confidence                          444433222222 8999999999998  578999999999999999999999987    4444443


Q ss_pred             HHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCC
Q 013973          337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLT  416 (433)
Q Consensus       337 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t  416 (433)
                      +..-..                                                 +..++..+++++..++.++|.+|+.
T Consensus       201 ~~~~~~-------------------------------------------------p~~l~~~a~~~~~~l~~r~p~nrLg  231 (612)
T KOG0603|consen  201 KAELEM-------------------------------------------------PRELSAEARSLFRQLFKRNPENRLG  231 (612)
T ss_pred             hhccCC-------------------------------------------------chhhhHHHHHHHHHHHhhCHHHHhc
Confidence            322222                                                 2345668899999999999999996


Q ss_pred             -----HHHHhcCCCCCCC
Q 013973          417 -----AREALRHPFFTRD  429 (433)
Q Consensus       417 -----a~ell~hp~f~~~  429 (433)
                           +.|+++|+||+..
T Consensus       232 ~~~~~~~eik~h~f~~~i  249 (612)
T KOG0603|consen  232 AGPDGVDEIKQHEFFQSI  249 (612)
T ss_pred             cCcchhHHHhccchheee
Confidence                 5799999999864

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.94  E-value=1.1e-27  Score=245.98  Aligned_cols=257  Identities=20%  Similarity=0.282  Sum_probs=181.3

Q ss_pred             EEEeeeeccccEEEEEEEECCCCeEEEEEEee----cchhhHHH---HHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973          100 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREA---AMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus       100 ~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~----~~~~~~~~---~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ...+.+|.|++|.|+.+......+.++.|.++    ........   ...|..+     .....|++++.....+.+...
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i-----~~~l~h~~~~e~l~~~~~~~~  395 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCI-----GSSLSHPNIIETLDIVQEIDG  395 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheee-----cccccCCchhhhHHHHhhccc
Confidence            46688999999988888887777767777554    11111111   1122222     223367777776666666555


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          173 ICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       173 ~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      .+-+||||.++|+.++...+  .++..++..++.|++.||.|||..||.|||||++|++++..|                
T Consensus       396 ~~~~mE~~~~Dlf~~~~~~~--~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g----------------  457 (601)
T KOG0590|consen  396 ILQSMEYCPYDLFSLVMSNG--KLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENG----------------  457 (601)
T ss_pred             chhhhhcccHHHHHHHhccc--ccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCC----------------
Confidence            55559999449999998763  699999999999999999999999999999999999996544                


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCC-------CceeecCcccchhhhhCCCCCC-cchhHHHHHHHHHHHhCCCCCC
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQ-------NYIVSTRHYRAPEVILGLGWTY-PCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~-~~DvwSlGv~l~elltg~~Pf~  324 (433)
                                 .+||+|||.+.......       ..++|+..|+|||++.+..|++ ..||||.|++++.|++|+.||.
T Consensus       458 -----------~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk  526 (601)
T KOG0590|consen  458 -----------ILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWK  526 (601)
T ss_pred             -----------ceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccc
Confidence                       56666666554332211       2358999999999999999985 5799999999999999999998


Q ss_pred             CCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHH
Q 013973          325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  404 (433)
Q Consensus       325 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  404 (433)
                      .....+....              .........+..                          ........++.+.+.+|.
T Consensus       527 ~a~~~~~~~~--------------~~~~~~~~~~~~--------------------------~~~~~~~~lp~~~~~~~~  566 (601)
T KOG0590|consen  527 VAKKSDNSFK--------------TNNYSDQRNIFE--------------------------GPNRLLSLLPRETRIIIY  566 (601)
T ss_pred             cccccccchh--------------hhcccccccccc--------------------------ChHHHHHhchhhHHHHHH
Confidence            6543321100              000000000000                          011122356778899999


Q ss_pred             hccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          405 GLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       405 ~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      +||+.||.+|.|+++|++.+||+...
T Consensus       567 ~~l~~~P~~R~ti~~i~~d~W~~~i~  592 (601)
T KOG0590|consen  567 RMLQLDPTKRITIEQILNDEWIRSIE  592 (601)
T ss_pred             HHccCChhheecHHHHhhChHhhhcc
Confidence            99999999999999999999998654

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.93  E-value=1.1e-25  Score=217.67  Aligned_cols=168  Identities=21%  Similarity=0.231  Sum_probs=122.0

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECC-CCeEEEEEEeecc------hhhHHHHHHHHHHHHHHHhcCCCCCceE-Eecce
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRE-RKEMVAIKIVRGI------KKYREAAMIEIEVLQQLAKHDKGGNRCV-QIRNW  166 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~-~~~~vAiK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~i~-~~~~~  166 (433)
                      +.++|.+.+.||+|+||+||+|+++. +++.||||++...      ......+.+|+++++.+.     |++++ .++. 
T Consensus        16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~-----h~~iv~~l~~-   89 (365)
T PRK09188         16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVR-----GIGVVPQLLA-   89 (365)
T ss_pred             ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhcc-----CCCCCcEEEE-
Confidence            34679999999999999999998876 6788899986422      223556789999999994     34454 4443 


Q ss_pred             eecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC-CCCceEeeccCccccCCCc
Q 013973          167 FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDL-KPENVLLVSSEYIKVPDYK  244 (433)
Q Consensus       167 ~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDl-Kp~NILl~~~~~~~i~dfg  244 (433)
                         .+..||||||+ |++|.. +..     ..   ...++.|++.||.|||++||||||| ||+|||++.          
T Consensus        90 ---~~~~~LVmE~~~G~~L~~-~~~-----~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~----------  147 (365)
T PRK09188         90 ---TGKDGLVRGWTEGVPLHL-ARP-----HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGP----------  147 (365)
T ss_pred             ---cCCcEEEEEccCCCCHHH-hCc-----cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcC----------
Confidence               24579999999 888862 211     11   1467899999999999999999999 999999954          


Q ss_pred             CCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----------CceeecCcccchhhhhCCC------CCCcchhH
Q 013973          245 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----------NYIVSTRHYRAPEVILGLG------WTYPCDIW  307 (433)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----------~~~~gt~~y~aPE~~~~~~------~~~~~Dvw  307 (433)
                                       ++.+||+|||+++......           ....+++.|+|||++....      .+..+|-|
T Consensus       148 -----------------~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW  210 (365)
T PRK09188        148 -----------------DGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW  210 (365)
T ss_pred             -----------------CCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence                             3456666666665333221           2357888999999986432      33446665

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.93  E-value=2.6e-24  Score=205.97  Aligned_cols=257  Identities=32%  Similarity=0.499  Sum_probs=191.5

Q ss_pred             EEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh----hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           99 YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      |.+.+.||.|+||.||++.+.   ..+|+|.+.....    ....+..|..++..+.++    ++++.+...+......+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~----~~i~~~~~~~~~~~~~~   74 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHP----PNIVKLYDFFQDEGSLY   74 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCC----cceeeEEEEEecCCEEE
Confidence            778899999999999999987   6799998864322    355677788888877432    26899999998888899


Q ss_pred             EEEecC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNY-RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      ++++++ ++++.+++..... ..++......++.|++.++.|+|+.+++||||||+||+++..+                
T Consensus        75 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~----------------  138 (384)
T COG0515          75 LVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDG----------------  138 (384)
T ss_pred             EEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCC----------------
Confidence            999999 8899877765432 2689999999999999999999999999999999999995433                


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCC---------CCceeecCcccchhhhhC---CCCCCcchhHHHHHHHHHHHhCC
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPD---------QNYIVSTRHYRAPEVILG---LGWTYPCDIWSVGCILVELCTGE  320 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~---------~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGv~l~elltg~  320 (433)
                                ..++++|||.+......         .....||..|+|||.+.+   ..+....|+||+|++++++++|.
T Consensus       139 ----------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~  208 (384)
T COG0515         139 ----------RVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGL  208 (384)
T ss_pred             ----------CeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCC
Confidence                      14677777766533322         244589999999999998   57889999999999999999999


Q ss_pred             CCCCCCCh----HHHHHHHHHHhCC-CCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCc
Q 013973          321 ALFQTHEN----LEHLAMMERVLGP-LPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS  395 (433)
Q Consensus       321 ~Pf~~~~~----~~~~~~i~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (433)
                      .||.....    ......+.....+ ...                     +.  ...  .                ....
T Consensus       209 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~--~~~--~----------------~~~~  247 (384)
T COG0515         209 PPFEGEKNSSATSQTLKIILELPTPSLAS---------------------PL--SPS--N----------------PELI  247 (384)
T ss_pred             CCCCCCCccccHHHHHHHHHhcCCccccc---------------------cc--Ccc--c----------------cchh
Confidence            99877653    2222221111111 000                     00  000  0                0112


Q ss_pred             hhHHHHHHHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       396 ~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      ...+.+++..++..+|..|.+..+...++|....
T Consensus       248 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~  281 (384)
T COG0515         248 SKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHL  281 (384)
T ss_pred             hHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCc
Confidence            3468899999999999999999998888766543

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.90  E-value=1.2e-23  Score=195.15  Aligned_cols=202  Identities=20%  Similarity=0.276  Sum_probs=124.7

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHh---------c-CCCCC-ceEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAK---------H-DKGGN-RCVQ  162 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~---------~-~~~~~-~i~~  162 (433)
                      .+...+.||.|+++.||.+.+..||+.+|+|++....    ...+...+|.-....+..         + .--.| -++.
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~   92 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR   92 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred             EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence            4778899999999999999999999999999985211    122223333222111100         0 00001 0222


Q ss_pred             ecc---eeecC---C-----eEEEEEecCCCCHHHHHH---hcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q 013973          163 IRN---WFDYR---N-----HICIVFEKLGSSLYDFLR---KNNYR--SFPIDLVREIARQLLECIAFMHDLCMIHTDLK  226 (433)
Q Consensus       163 ~~~---~~~~~---~-----~~~lV~e~~~~~L~~~l~---~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlK  226 (433)
                      +.+   ++...   .     +.+++|+-+.++|.+++.   .....  .+.......+..|+++.+++||+.||||+|||
T Consensus        93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~  172 (288)
T PF14531_consen   93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK  172 (288)
T ss_dssp             ETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred             EcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence            221   11111   1     347888888889988754   22211  12333445677999999999999999999999


Q ss_pred             CCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCC--------
Q 013973          227 PENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL--------  298 (433)
Q Consensus       227 p~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~--------  298 (433)
                      |+|+|+                           +.++.++|+||+.....+........+..|.+||.....        
T Consensus       173 ~~nfll---------------------------~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~  225 (288)
T PF14531_consen  173 PENFLL---------------------------DQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNA  225 (288)
T ss_dssp             GGGEEE----------------------------TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEE
T ss_pred             eeeEEE---------------------------cCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccc
Confidence            999999                           455677777776554333221112345779999987543        


Q ss_pred             CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          299 GWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       299 ~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                      .++.+.|.|+||+++|.|.+|..||...
T Consensus       226 ~~t~~~DaW~LG~~ly~lWC~~lPf~~~  253 (288)
T PF14531_consen  226 PYTFATDAWQLGITLYSLWCGRLPFGLS  253 (288)
T ss_dssp             EE-HHHHHHHHHHHHHHHHHSS-STCCC
T ss_pred             eeeeccCHHHHHHHHHHHHHccCCCCCC
Confidence            4788999999999999999999999753

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=2.3e-23  Score=194.02  Aligned_cols=192  Identities=21%  Similarity=0.304  Sum_probs=144.0

Q ss_pred             CCCCCceEEecceeec---------------------------CCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHH
Q 013973          154 DKGGNRCVQIRNWFDY---------------------------RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIAR  206 (433)
Q Consensus       154 ~~~~~~i~~~~~~~~~---------------------------~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~  206 (433)
                      ...||||+.+...|.+                           +..+|+||.-...+|.+||..+.   .+....+-++.
T Consensus       272 La~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~~---~s~r~~~~~la  348 (598)
T KOG4158|consen  272 LAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTRH---RSYRTGRVILA  348 (598)
T ss_pred             cCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcCC---CchHHHHHHHH
Confidence            3578999999988754                           34789999988899999998763   67788888999


Q ss_pred             HHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCC--------
Q 013973          207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP--------  278 (433)
Q Consensus       207 qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--------  278 (433)
                      |+++|+.|||++||.|||+|.+|||+.-+.                       |+-..+.|+|||.+--...        
T Consensus       349 QlLEav~hL~~hgvAhRDlKSDNiL~Eldd-----------------------D~~P~LVvaDFGCcLAd~~hGlqlpy~  405 (598)
T KOG4158|consen  349 QLLEAVTHLHKHGVAHRDLKSDNILLELDD-----------------------DEIPQLVVADFGCCLADDNHGLQLPYE  405 (598)
T ss_pred             HHHHHHHHHHHccchhhcccccceEEEecC-----------------------CCCcEEEEcccceeeeccccccccccc
Confidence            999999999999999999999999995432                       5566778888886532111        


Q ss_pred             -CCCceeecCcccchhhhhCCC-----C-CCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHh
Q 013973          279 -DQNYIVSTRHYRAPEVILGLG-----W-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVD  351 (433)
Q Consensus       279 -~~~~~~gt~~y~aPE~~~~~~-----~-~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~  351 (433)
                       ......|...-||||+....+     . -.++|.|+.|.+.||+++...||.+......-.                  
T Consensus       406 S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~------------------  467 (598)
T KOG4158|consen  406 SDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDT------------------  467 (598)
T ss_pred             cccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheech------------------
Confidence             111235778899999987543     1 257899999999999999999998643321000                  


Q ss_pred             hhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHH
Q 013973          352 RHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR  418 (433)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~  418 (433)
                         ..|-                          .......++.+++.+++|+..+|+.||.+|+++.
T Consensus       468 ---r~Yq--------------------------e~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~  505 (598)
T KOG4158|consen  468 ---RTYQ--------------------------ESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPN  505 (598)
T ss_pred             ---hhhh--------------------------hhhCCCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence               0000                          0111234557788999999999999999999843

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.90  E-value=4.8e-24  Score=219.74  Aligned_cols=252  Identities=24%  Similarity=0.325  Sum_probs=177.5

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh--hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      ++...+.||++.|=+|.+|++.+ |. |+||++-+.+.  .-..+..+++-++.   ....+||++.+..+.......||
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~e-G~-vVvKVFvk~~p~~sL~~~~qrL~~ik~---~l~~~pn~lPfqk~~~t~kAAyl   98 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDRE-GL-VVVKVFVKQDPTISLRPFKQRLEEIKF---ALMKAPNCLPFQKVLVTDKAAYL   98 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCC-ce-EEEEEEeccCCCCCchHHHHHHHHHHH---HhhcCCcccchHHHHHhhHHHHH
Confidence            58889999999999999998754 33 99999854331  11222222222221   12266899999999888999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC--CCCC
Q 013973          176 VFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT--PKDS  253 (433)
Q Consensus       176 V~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~--~~~~  253 (433)
                      |=+|...+|+|.|..+.  .|..-+.+.|+.|++.||.-+|..||+|+|||.+||||++=.=+.|+||-.-++.  |.++
T Consensus        99 vRqyvkhnLyDRlSTRP--FL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN  176 (1431)
T KOG1240|consen   99 VRQYVKHNLYDRLSTRP--FLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN  176 (1431)
T ss_pred             HHHHHhhhhhhhhccch--HHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCC
Confidence            99999999999997754  6778888999999999999999999999999999999998777888888644332  2221


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCC----------C-CCCcchhHHHHHHHHHHHh-CCC
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL----------G-WTYPCDIWSVGCILVELCT-GEA  321 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~----------~-~~~~~DvwSlGv~l~ellt-g~~  321 (433)
                                   =+||+.-.....      --.+|+|||.+...          . .+++-||||+||+++||++ |++
T Consensus       177 -------------Padf~fFFDTSr------RRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~P  237 (1431)
T KOG1240|consen  177 -------------PADFTFFFDTSR------RRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRP  237 (1431)
T ss_pred             -------------cccceEEEecCC------ceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCC
Confidence                         134543332111      12369999988642          1 5678899999999999987 799


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       322 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      ||.-    .++-.....-...++..                             .+.               ..+..++.
T Consensus       238 lF~L----SQL~aYr~~~~~~~e~~-----------------------------Le~---------------Ied~~~Rn  269 (1431)
T KOG1240|consen  238 LFTL----SQLLAYRSGNADDPEQL-----------------------------LEK---------------IEDVSLRN  269 (1431)
T ss_pred             cccH----HHHHhHhccCccCHHHH-----------------------------HHh---------------CcCccHHH
Confidence            9952    11111000000111111                             111               11236788


Q ss_pred             HHHhccccCCCCCCCHHHHhcC
Q 013973          402 LLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       402 li~~~L~~dP~~R~ta~ell~h  423 (433)
                      ||..|+++||++|++|++.|+-
T Consensus       270 lil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  270 LILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             HHHHHHccCchhccCHHHHHHh
Confidence            9999999999999999999974

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.89  E-value=2.8e-22  Score=178.37  Aligned_cols=137  Identities=19%  Similarity=0.203  Sum_probs=102.6

Q ss_pred             EeeeeccccEEEEEEEECCCCeEEEEEEeecchh---h------------------------HHHHHHHHHHHHHHHhcC
Q 013973          102 HSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK---Y------------------------REAAMIEIEVLQQLAKHD  154 (433)
Q Consensus       102 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~------------------------~~~~~~E~~~l~~l~~~~  154 (433)
                      ...||+|+||.||+|.+. +|+.||||+++....   .                        ......|..++.++.+..
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG   80 (190)
T ss_pred             CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence            468999999999999987 899999999974311   0                        112234889999997644


Q ss_pred             CCCCceEEecceeecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH-HHCCceeccCCCCceEe
Q 013973          155 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM-HDLCMIHTDLKPENVLL  232 (433)
Q Consensus       155 ~~~~~i~~~~~~~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~L-H~~~ivHrDlKp~NILl  232 (433)
                      ...|.+..      ... .+|||||+ |+++...+...  ..++...+..++.|++.+|.|| |+.|||||||||+|||+
T Consensus        81 v~~p~~~~------~~~-~~iVmE~i~g~~l~~~~~~~--~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli  151 (190)
T cd05147          81 IPCPEPIL------LKS-HVLVMEFIGDDGWAAPRLKD--APLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLY  151 (190)
T ss_pred             CCCCcEEE------ecC-CEEEEEEeCCCCCcchhhhc--CCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE
Confidence            33344322      112 37999999 55555443322  3689999999999999999999 79999999999999999


Q ss_pred             eccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCcccc
Q 013973          233 VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE  276 (433)
Q Consensus       233 ~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~  276 (433)
                      +                            ++.++|+|||++...
T Consensus       152 ~----------------------------~~~v~LiDFG~a~~~  167 (190)
T cd05147         152 H----------------------------DGKLYIIDVSQSVEH  167 (190)
T ss_pred             E----------------------------CCcEEEEEccccccC
Confidence            4                            246899999988743

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.89  E-value=1e-22  Score=183.53  Aligned_cols=170  Identities=14%  Similarity=0.151  Sum_probs=122.5

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHH----------HHHHHHHHHHHHhcCCCCCceEEe
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----------AMIEIEVLQQLAKHDKGGNRCVQI  163 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~----------~~~E~~~l~~l~~~~~~~~~i~~~  163 (433)
                      .+.++|++++.||.|+||.||++..  ++..+|+|+++......+.          +.+|+..+.++.+.     ++...
T Consensus        28 ~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~-----GI~~~  100 (232)
T PRK10359         28 FLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSE-----GLASL  100 (232)
T ss_pred             HhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHC-----CCCcc
Confidence            3568999999999999999999755  3557999999632221111          46788888888554     34444


Q ss_pred             cceee--------cCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeec
Q 013973          164 RNWFD--------YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVS  234 (433)
Q Consensus       164 ~~~~~--------~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~  234 (433)
                      ..++.        ..+..+|||||+ |.+|.++.      .+++    ....+++.+|..||+.||+|||+||+||+++ 
T Consensus       101 ~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~------~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~-  169 (232)
T PRK10359        101 NDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMP------EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVS-  169 (232)
T ss_pred             eEeeeecccccccccCCeEEEEEEECCccHHHhh------hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEe-
Confidence            44332        235689999999 77898773      2333    2456999999999999999999999999994 


Q ss_pred             cCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHH
Q 013973          235 SEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILV  314 (433)
Q Consensus       235 ~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~  314 (433)
                                                .++ ++|+|||..........         ...++....|+.++|+||||+++.
T Consensus       170 --------------------------~~g-i~liDfg~~~~~~e~~a---------~d~~vler~y~~~~di~~lg~~~~  213 (232)
T PRK10359        170 --------------------------KNG-LRIIDLSGKRCTAQRKA---------KDRIDLERHYGIKNEIKDLGYYLL  213 (232)
T ss_pred             --------------------------CCC-EEEEECCCcccccchhh---------HHHHHHHhHhcccccccceeEeeh
Confidence                                      334 88999987764422211         112445566888999999999887


Q ss_pred             HHH
Q 013973          315 ELC  317 (433)
Q Consensus       315 ell  317 (433)
                      .+.
T Consensus       214 ~~~  216 (232)
T PRK10359        214 IYK  216 (232)
T ss_pred             HHH
Confidence            654

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.87  E-value=1.8e-21  Score=171.95  Aligned_cols=182  Identities=18%  Similarity=0.167  Sum_probs=131.8

Q ss_pred             EEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHH-----HHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973          100 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYRE-----AAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus       100 ~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~-----~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      .+...|++|+||+||++..  .+..++.+.+........     .+.+|+++|+++.++    ++++.++++    +..+
T Consensus         5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~----~~vP~ll~~----~~~~   74 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGL----PRTPRLLHW----DGRH   74 (218)
T ss_pred             ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCC----CCCCEEEEE----cCEE
Confidence            4568899999999997754  566788777765443322     467899999998543    445666554    3468


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC-CCCceEeeccCccccCCCcCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDL-KPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDl-Kp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      +||||+ |.+|.+.+..        . ...++.|++.+|+++|++||||||| ||+|||++.                  
T Consensus        75 lvmeyI~G~~L~~~~~~--------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~------------------  127 (218)
T PRK12274         75 LDRSYLAGAAMYQRPPR--------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQE------------------  127 (218)
T ss_pred             EEEeeecCccHHhhhhh--------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcC------------------
Confidence            999999 7788654321        1 1357889999999999999999999 799999954                  


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCCC----------------ceeecCcccchhhhhCC-CCC-CcchhHHHHHHHH
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQN----------------YIVSTRHYRAPEVILGL-GWT-YPCDIWSVGCILV  314 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~----------------~~~gt~~y~aPE~~~~~-~~~-~~~DvwSlGv~l~  314 (433)
                               ++.++|+|||++........                ....++.|++|+.-.-- ..+ ...++++-|+.+|
T Consensus       128 ---------~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~  198 (218)
T PRK12274        128 ---------DGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVY  198 (218)
T ss_pred             ---------CCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHH
Confidence                     44567777777664433221                12358889999865432 334 6779999999999


Q ss_pred             HHHhCCCCCCCCC
Q 013973          315 ELCTGEALFQTHE  327 (433)
Q Consensus       315 elltg~~Pf~~~~  327 (433)
                      .++|+..|+-+++
T Consensus       199 ~~~~~~~~~~~~~  211 (218)
T PRK12274        199 RFVTRRVLHWEDN  211 (218)
T ss_pred             HHHhccCCccccC
Confidence            9999998875543

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.87  E-value=2e-21  Score=173.35  Aligned_cols=136  Identities=17%  Similarity=0.127  Sum_probs=100.7

Q ss_pred             EeeeeccccEEEEEEEECCCCeEEEEEEeecchhh---------------------------HHHHHHHHHHHHHHHhcC
Q 013973          102 HSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY---------------------------REAAMIEIEVLQQLAKHD  154 (433)
Q Consensus       102 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---------------------------~~~~~~E~~~l~~l~~~~  154 (433)
                      .+.||+|+||.||+|.+. +|+.||||+++.....                           ......|...+.++.+..
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05145           2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG   80 (190)
T ss_pred             CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            478999999999999987 8999999998743110                           112346788888886643


Q ss_pred             CCCCceEEecceeecCCeEEEEEecC-CCCHHH-HHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCceE
Q 013973          155 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYD-FLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVL  231 (433)
Q Consensus       155 ~~~~~i~~~~~~~~~~~~~~lV~e~~-~~~L~~-~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~ivHrDlKp~NIL  231 (433)
                      ...|...   ..  .  ..+|||||+ |+++.. .+..   ..++...+..++.|++.+|.+||+ .||+||||||+|||
T Consensus        81 i~~p~~~---~~--~--~~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIl  150 (190)
T cd05145          81 VPVPEPI---LL--K--KNVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNIL  150 (190)
T ss_pred             CCCceEE---Ee--c--CCEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEE
Confidence            3223222   11  1  248999999 554433 3433   258889999999999999999999 99999999999999


Q ss_pred             eeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCcccc
Q 013973          232 LVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE  276 (433)
Q Consensus       232 l~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~  276 (433)
                      ++                            ++.++|+|||++...
T Consensus       151 l~----------------------------~~~~~liDFG~a~~~  167 (190)
T cd05145         151 YH----------------------------DGKPYIIDVSQAVEL  167 (190)
T ss_pred             EE----------------------------CCCEEEEEcccceec
Confidence            94                            346888888887654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK10345 hypothetical protein; Provisional

Probab=99.87  E-value=4.1e-21  Score=172.59  Aligned_cols=141  Identities=18%  Similarity=0.183  Sum_probs=111.2

Q ss_pred             EeeeeccccEEEEEEEECCCCeEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC---eEE-EE
Q 013973          102 HSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN---HIC-IV  176 (433)
Q Consensus       102 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~---~~~-lV  176 (433)
                      .+.||+|+||.||.  +..++.. +||++... ....+...+|+.+++.+.+....|+||++++++++++.   .++ +|
T Consensus         7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I   83 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI   83 (210)
T ss_pred             cceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence            47899999999995  6666655 69987642 22456688999999999877778899999999998863   544 78


Q ss_pred             EecC---CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHH-HHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          177 FEKL---GSSLYDFLRKNNYRSFPIDLVREIARQLLECI-AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       177 ~e~~---~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L-~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      |||+   +++|.+++.+.   .+++.  ..++.|++.++ +|||+++||||||||+|||++..+                
T Consensus        84 ~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~----------------  142 (210)
T PRK10345         84 ADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRIS----------------  142 (210)
T ss_pred             ecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccC----------------
Confidence            9995   48999999653   46665  35688888888 999999999999999999996432                


Q ss_pred             CcccccCCCCCCEEEEecCCc
Q 013973          253 SSYFKRMPKSSAIKVIDFGST  273 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a  273 (433)
                             +.+..++|+||+.+
T Consensus       143 -------~~~~~~~LiDg~G~  156 (210)
T PRK10345        143 -------ESEVIPVVCDNIGE  156 (210)
T ss_pred             -------CCCCcEEEEECCCC
Confidence                   34458999995543

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.85  E-value=2.7e-21  Score=202.98  Aligned_cols=198  Identities=24%  Similarity=0.387  Sum_probs=151.9

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  176 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV  176 (433)
                      ..|.|.+.||+|+||+||+|...+ |+.||+|+-+....+  ++..=.+++.+|.  ...-+-|..+...+...+.-+||
T Consensus       698 ~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~W--EfYI~~q~~~RLk--~~~~~~~~~~~~a~~~~~~S~lv  772 (974)
T KOG1166|consen  698 EKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPW--EFYICLQVMERLK--PQMLPSIMHISSAHVFQNASVLV  772 (974)
T ss_pred             eeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCce--eeeehHHHHHhhc--hhhhcchHHHHHHHccCCcceee
Confidence            579999999999999999999877 999999987633221  1111122222332  00113355555556667778899


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          177 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       177 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      +||. -|+|.+++...  +.+++..+..++.|++.-+++||..+|||+||||+|+||...   +..|             
T Consensus       773 ~ey~~~Gtlld~~N~~--~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~---~~~~-------------  834 (974)
T KOG1166|consen  773 SEYSPYGTLLDLINTN--KVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRRE---ICAD-------------  834 (974)
T ss_pred             eeccccccHHHhhccC--CCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecc---cCCC-------------
Confidence            9999 89999999844  489999999999999999999999999999999999999542   1111             


Q ss_pred             cccCCCCCCEEEEecCCccccCC--CC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCC
Q 013973          256 FKRMPKSSAIKVIDFGSTTYERP--DQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA  321 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~~--~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~  321 (433)
                          .....++|+|||.+.....  +.   ...++|-.+--+|+..|..++..+|.|.|+.+++.||.|++
T Consensus       835 ----~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  835 ----SDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             ----CcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence                2255799999998864332  22   22578999999999999999999999999999999999964

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.83  E-value=2.9e-21  Score=186.94  Aligned_cols=184  Identities=27%  Similarity=0.424  Sum_probs=130.4

Q ss_pred             CeEEEEEecC-CCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKN-NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      .++||.|++| ..+|.++|... .....++...+.++.|++.|++|   +|.+|||+||.||++..++.+||.|||+...
T Consensus       329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts  405 (516)
T KOG1033|consen  329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTS  405 (516)
T ss_pred             cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheee
Confidence            4689999999 89999999733 33457788899999999999999   9999999999999997666666666665443


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhC-CCCCCCCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG-EALFQTHE  327 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg-~~Pf~~~~  327 (433)
                      .....+.                  .......+..+||..||+||.|.+..|+.++||||||++|+||+.- ...|    
T Consensus       406 ~~~~~~~------------------~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~----  463 (516)
T KOG1033|consen  406 QDKDETV------------------APAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQF----  463 (516)
T ss_pred             cccCCcc------------------cchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHH----
Confidence            3221100                  0000112335899999999999999999999999999999999972 2222    


Q ss_pred             hHHHHHHHHHH-hCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          328 NLEHLAMMERV-LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       328 ~~~~~~~i~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                        +..+.+..+ -|..|+..+                                             .. -++-.+|+.+|
T Consensus       464 --er~~t~~d~r~g~ip~~~~---------------------------------------------~d-~p~e~~ll~~l  495 (516)
T KOG1033|consen  464 --ERIATLTDIRDGIIPPEFL---------------------------------------------QD-YPEEYTLLQQL  495 (516)
T ss_pred             --HHHHhhhhhhcCCCChHHh---------------------------------------------hc-CcHHHHHHHHh
Confidence              111111111 111221110                                             11 12456899999


Q ss_pred             cccCCCCCCCHHHHhcCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFT  427 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~  427 (433)
                      |...|.+||++.+.-.|+|.+
T Consensus       496 ls~~p~~RP~~~~~~~~~~~~  516 (516)
T KOG1033|consen  496 LSPSPEERPSAIEVALHEFLQ  516 (516)
T ss_pred             cCCCcccCchHHHHhhhhhcC
Confidence            999999999999999998864

>smart00090 RIO RIO-like kinase

Probab=99.82  E-value=7.6e-20  Score=168.21  Aligned_cols=142  Identities=20%  Similarity=0.153  Sum_probs=106.9

Q ss_pred             cEEEEeeeeccccEEEEEEE-ECCCCeEEEEEEeecchh-------------------------hHHHHHHHHHHHHHHH
Q 013973           98 RYKIHSKMGEGTFGQVLECW-DRERKEMVAIKIVRGIKK-------------------------YREAAMIEIEVLQQLA  151 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~-~~~~~~~vAiK~~~~~~~-------------------------~~~~~~~E~~~l~~l~  151 (433)
                      -|++.+.||+|+||.||+|. +..+|+.||+|+++....                         .......|+.+++++.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            37899999999999999999 677899999999874211                         1123457999999996


Q ss_pred             hcCCCCCceEEecceeecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCCCc
Q 013973          152 KHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC-MIHTDLKPEN  229 (433)
Q Consensus       152 ~~~~~~~~i~~~~~~~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlKp~N  229 (433)
                      +..   ..+...+..    ...++||||+ |.+|...+...  ..+....+..++.||+.+|.+||+.| |+||||||+|
T Consensus       109 ~~~---i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~N  179 (237)
T smart00090      109 EAG---VPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYN  179 (237)
T ss_pred             hcC---CCCCeeeEe----cCceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhh
Confidence            532   223333332    2348999999 55666554332  24666677899999999999999999 9999999999


Q ss_pred             eEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCcccc
Q 013973          230 VLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE  276 (433)
Q Consensus       230 ILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~  276 (433)
                      |+++                            .+.++|+|||.+...
T Consensus       180 Ili~----------------------------~~~i~LiDFg~a~~~  198 (237)
T smart00090      180 ILVH----------------------------DGKVVIIDVSQSVEL  198 (237)
T ss_pred             EEEE----------------------------CCCEEEEEChhhhcc
Confidence            9993                            346899999987743

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.82  E-value=9.4e-21  Score=168.57  Aligned_cols=240  Identities=16%  Similarity=0.189  Sum_probs=176.3

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeec---chhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ...++-+|.+...|..|+|+...+.  ++.|+++-   .......+..|.-.|+.+     .||||+.+++.+....++.
T Consensus       191 ~lnl~tkl~e~hsgelwrgrwqgnd--ivakil~vr~~t~risrdfneefp~lrif-----shpnilpvlgacnsppnlv  263 (448)
T KOG0195|consen  191 SLNLITKLAESHSGELWRGRWQGND--IVAKILNVREVTARISRDFNEEFPALRIF-----SHPNILPVLGACNSPPNLV  263 (448)
T ss_pred             hhhhhhhhccCCCcccccccccCcc--hhhhhhhhhhcchhhcchhhhhCcceeee-----cCCchhhhhhhccCCCCce
Confidence            4567788999999999999886544  66777652   223334455666666655     6799999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC--MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      ++..|| -|+|+..|+....-..+-.++.+++.+|++|+.|||+..  |.---|....++|+++-+.+|           
T Consensus       264 ~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltari-----------  332 (448)
T KOG0195|consen  264 IISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARI-----------  332 (448)
T ss_pred             EeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhe-----------
Confidence            999999 899999999876566788899999999999999999875  434468888999966543333           


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCC---CcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWT---YPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                                    ..+|--++... .+   ..-.+.||+||.+...+-+   .++|+|||++++|||.|...||.....
T Consensus       333 --------------smad~kfsfqe-~g---r~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlsp  394 (448)
T KOG0195|consen  333 --------------SMADTKFSFQE-VG---RAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSP  394 (448)
T ss_pred             --------------ecccceeeeec-cc---cccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCc
Confidence                          22332222211 01   1237889999999876533   578999999999999999999998777


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      ++.-.++. +                     .|                         +-...++..+..+..|+.-|++
T Consensus       395 mecgmkia-l---------------------eg-------------------------lrv~ippgis~hm~klm~icmn  427 (448)
T KOG0195|consen  395 MECGMKIA-L---------------------EG-------------------------LRVHIPPGISRHMNKLMNICMN  427 (448)
T ss_pred             hhhhhhhh-h---------------------cc-------------------------ccccCCCCccHHHHHHHHHHhc
Confidence            76533321 0                     00                         0011234667789999999999


Q ss_pred             cCCCCCCCHHHH
Q 013973          409 YDPTDRLTAREA  420 (433)
Q Consensus       409 ~dP~~R~ta~el  420 (433)
                      .||.+||..+.+
T Consensus       428 edpgkrpkfdmi  439 (448)
T KOG0195|consen  428 EDPGKRPKFDMI  439 (448)
T ss_pred             CCCCcCCCccee
Confidence            999999987765

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.78  E-value=3.5e-18  Score=154.99  Aligned_cols=132  Identities=22%  Similarity=0.274  Sum_probs=100.5

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecch---------hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---------~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      +.||+|++|.||+|..  .+..+++|+.....         ........|+.++..+.+.....|     ..++......
T Consensus         2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p-----~~~~~~~~~~   74 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVP-----AVYFVDPENF   74 (211)
T ss_pred             cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-----eEEEEeCCCC
Confidence            6799999999999987  56678999764211         112346678889988865432222     2233445678


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      ++||||+ |++|.+++....     . ....++.+++.+|.+||+.|++|+|++|+|||++                   
T Consensus        75 ~lv~e~~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-------------------  129 (211)
T PRK14879         75 IIVMEYIEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-------------------  129 (211)
T ss_pred             EEEEEEeCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-------------------
Confidence            8999999 889999986532     2 7788999999999999999999999999999994                   


Q ss_pred             CcccccCCCCCCEEEEecCCccc
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTY  275 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~  275 (433)
                               .+.++|+|||.+..
T Consensus       130 ---------~~~~~liDf~~a~~  143 (211)
T PRK14879        130 ---------GGKIYLIDFGLAEF  143 (211)
T ss_pred             ---------CCCEEEEECCcccC
Confidence                     34688889988765

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.76  E-value=1.1e-17  Score=150.18  Aligned_cols=135  Identities=24%  Similarity=0.270  Sum_probs=99.3

Q ss_pred             EEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh-----------------------hHHHHHHHHHHHHHHHhcCC
Q 013973           99 YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-----------------------YREAAMIEIEVLQQLAKHDK  155 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-----------------------~~~~~~~E~~~l~~l~~~~~  155 (433)
                      |.+.+.||+|+||.||+|... +|+.||||+++....                       .......|..++..+.+...
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   95 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF   95 (198)
T ss_pred             hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence            778899999999999999875 789999998753210                       11224567888888755321


Q ss_pred             CCCceEEecceeecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeec
Q 013973          156 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVS  234 (433)
Q Consensus       156 ~~~~i~~~~~~~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~  234 (433)
                         .++..+.    ....++||||+ |++|.....        ......++.+++.++.++|+.||+||||||+||++  
T Consensus        96 ---~v~~~~~----~~~~~lv~e~~~g~~L~~~~~--------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill--  158 (198)
T cd05144          96 ---PVPKPID----WNRHAVVMEYIDGVELYRVRV--------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILV--  158 (198)
T ss_pred             ---CCCceee----cCCceEEEEEeCCcchhhccc--------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEE--
Confidence               2233322    23458999999 778765432        13456788999999999999999999999999999  


Q ss_pred             cCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCcccc
Q 013973          235 SEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE  276 (433)
Q Consensus       235 ~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~  276 (433)
                                               ++++.++|+|||.+...
T Consensus       159 -------------------------~~~~~~~liDfg~~~~~  175 (198)
T cd05144         159 -------------------------DDDEKIYIIDWPQMVST  175 (198)
T ss_pred             -------------------------cCCCcEEEEECCccccC
Confidence                                     44567888888887543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.75  E-value=8.2e-19  Score=181.33  Aligned_cols=283  Identities=21%  Similarity=0.277  Sum_probs=202.0

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  176 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV  176 (433)
                      +.+.+.+-+-+|.++.++.+.-..++...++|+.............++..-..+ ....++|.++.....+......+||
T Consensus       804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~-~i~p~~P~v~~~~~s~~~rsP~~L~  882 (1205)
T KOG0606|consen  804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNI-LITPRSPAVVRSFPSFPCRSPLPLV  882 (1205)
T ss_pred             ccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCc-cccCCCCceecccCCCCCCCCcchh
Confidence            447788888899999999998888887778877653332222111111111111 1112446667666667778899999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC-CCCc
Q 013973          177 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP-KDSS  254 (433)
Q Consensus       177 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~-~~~~  254 (433)
                      ++|. +++|...|+..+  ..+.+.++.++..+..+++|||...++|||+||.|+|+..+|+.+++|||...... ..+.
T Consensus       883 ~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~  960 (1205)
T KOG0606|consen  883 GHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPT  960 (1205)
T ss_pred             hHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCc
Confidence            9999 889999998776  68888899999999999999999999999999999999999999999998433222 1111


Q ss_pred             ccccCCCCCCEEEEecCCcccc---CC----CCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYE---RP----DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~---~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                      .-.. ........-+++.....   ..    ......||+.|.|||.+.+...+..+|||++|++++|.++|.+||....
T Consensus       961 ~~~s-g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~t 1039 (1205)
T KOG0606|consen  961 TDLS-GPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAET 1039 (1205)
T ss_pred             CCcc-cccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcc
Confidence            0000 00011111122211110   01    1233579999999999999999999999999999999999999999877


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ....+..                       +-.+...||+..                       ...+.++++++..+|
T Consensus      1040 pq~~f~n-----------------------i~~~~~~~p~g~-----------------------~~~s~~aq~~~~~ll 1073 (1205)
T KOG0606|consen 1040 PQQIFEN-----------------------ILNRDIPWPEGP-----------------------EEGSYEAQDLINRLL 1073 (1205)
T ss_pred             hhhhhhc-----------------------cccCCCCCCCCc-----------------------cccChhhhhhhhhhh
Confidence            6555432                       233445566532                       356778999999999


Q ss_pred             ccCCCCCCCHH---HHhcCCCCCCC
Q 013973          408 RYDPTDRLTAR---EALRHPFFTRD  429 (433)
Q Consensus       408 ~~dP~~R~ta~---ell~hp~f~~~  429 (433)
                      ..+|.+|.++.   ++..|+||+..
T Consensus      1074 ~~~~~qr~~a~~~~e~k~~~~~~~~ 1098 (1205)
T KOG0606|consen 1074 TEEPTQRLGAKGAAEVKGHPFFQDV 1098 (1205)
T ss_pred             ccCchhccCcccccccccCCccCCC
Confidence            99999999887   99999999864

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.74  E-value=1.7e-17  Score=149.09  Aligned_cols=129  Identities=21%  Similarity=0.252  Sum_probs=96.5

Q ss_pred             eeeccccEEEEEEEECCCCeEEEEEEeecch---------hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973          104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIK---------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus       104 ~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---------~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      .||+|+||.||+|..  ++..+++|......         ........|++++..+.+....   ++.++.  ......+
T Consensus         1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~---~p~~~~--~~~~~~~   73 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVN---TPVVYD--VDPDNKT   73 (199)
T ss_pred             CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCC---CCEEEE--EECCCCE
Confidence            489999999999984  56779999854211         1124456799999988764322   233332  2345668


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +||||+ |++|.+++....  .       .++.|++.+|.+||+.|++|+|+||+||+++                    
T Consensus        74 lv~e~~~g~~l~~~~~~~~--~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~--------------------  124 (199)
T TIGR03724        74 IVMEYIEGKPLKDVIEEGN--D-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR--------------------  124 (199)
T ss_pred             EEEEEECCccHHHHHhhcH--H-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE--------------------
Confidence            999999 889998875532  1       7899999999999999999999999999994                    


Q ss_pred             cccccCCCCCCEEEEecCCcccc
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYE  276 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~  276 (433)
                              ++.++++|||.+...
T Consensus       125 --------~~~~~liDfg~a~~~  139 (199)
T TIGR03724       125 --------DDKLYLIDFGLGKYS  139 (199)
T ss_pred             --------CCcEEEEECCCCcCC
Confidence                    356889999887653

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.73  E-value=2e-19  Score=185.13  Aligned_cols=254  Identities=21%  Similarity=0.308  Sum_probs=183.7

Q ss_pred             EEEEeeeeccccEEEEEEEECCC-CeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           99 YKIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~-~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      |.+.+.||+|+|+.|-++.+..+ ...+|.|.+....   ........|..+-+.+    ..|.|++.+++........+
T Consensus        22 ~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~----s~h~n~~~~~~~~~~~~~~~   97 (601)
T KOG0590|consen   22 YKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKL----SKHSNTVHMIEPSSSPRSYL   97 (601)
T ss_pred             ccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccc----cccccccccCCccCCCcccc
Confidence            77888899999999998877433 4456777664222   1222222344443333    23788999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-HCCceeccCCCCceEeeccC-ccccCCCcCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH-DLCMIHTDLKPENVLLVSSE-YIKVPDYKSSLHTPK  251 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH-~~~ivHrDlKp~NILl~~~~-~~~i~dfg~~~~~~~  251 (433)
                      +++++. |+++++.+........+...+..++.|+..++.|+| ..++.||||||+|.+++..+ .+             
T Consensus        98 ~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l-------------  164 (601)
T KOG0590|consen   98 LSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSAL-------------  164 (601)
T ss_pred             cccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcc-------------
Confidence            999999 999988884333235778888999999999999999 99999999999999996655 44             


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCC-CC-----Cceee-cCcccchhhhhCCC-CCCcchhHHHHHHHHHHHhCCCCC
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERP-DQ-----NYIVS-TRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALF  323 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~-----~~~~g-t~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~Pf  323 (433)
                                    ++.|||+|..... ..     ...+| ++.|+|||...+.. ..+..|+||.|+++..+++|..|+
T Consensus       165 --------------~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~  230 (601)
T KOG0590|consen  165 --------------KIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPW  230 (601)
T ss_pred             --------------cCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCc
Confidence                          4455555443332 11     12378 99999999999854 568899999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhcc-CcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR-GRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      ..........                     ..++.. +.+.                        ...+...+....++
T Consensus       231 ~~~~~~~~~~---------------------~~~~~~~~~~~------------------------~~~~~~~~~~~~~~  265 (601)
T KOG0590|consen  231 DFPSRKDGRY---------------------SSWKSNKGRFT------------------------QLPWNSISDQAHDL  265 (601)
T ss_pred             cccccccccc---------------------eeecccccccc------------------------cCccccCChhhhhc
Confidence            7543322100                     000000 0000                        11234556678899


Q ss_pred             HHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          403 LQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       403 i~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      +.++|..+|..|.+..++..+||+..
T Consensus       266 l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  266 LHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             ccccccCCchhccccccccccccccc
Confidence            99999999999999999999999987

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.72  E-value=5e-17  Score=167.61  Aligned_cols=135  Identities=23%  Similarity=0.264  Sum_probs=100.2

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEe--ec--ch-----hhHHHHHHHHHHHHHHHhcCCCCCceEEecce
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RG--IK-----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  166 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~--~~--~~-----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~  166 (433)
                      ...|...+.||+|+||.||+|......  +++|+.  +.  ..     ...+.+..|+.+++.+.+     ++++....+
T Consensus       332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~--~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~-----~~i~~p~~~  404 (535)
T PRK09605        332 KRRKIPDHLIGKGAEADIKKGEYLGRD--AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARR-----AGVPTPVIY  404 (535)
T ss_pred             ccccCccceeccCCcEEEEEEeecCcc--ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcc-----cCCCeeEEE
Confidence            345567899999999999999875544  344432  11  11     122456789999998854     344444444


Q ss_pred             eecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcC
Q 013973          167 FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  245 (433)
Q Consensus       167 ~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~  245 (433)
                      +......++||||+ |++|.+++.          ....++.|++.+|.|||+.||+||||||+|||++            
T Consensus       405 ~~~~~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~------------  462 (535)
T PRK09605        405 DVDPEEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR------------  462 (535)
T ss_pred             EEeCCCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE------------
Confidence            44556678999999 889998875          3467899999999999999999999999999993            


Q ss_pred             CCCCCCCCcccccCCCCCCEEEEecCCccc
Q 013973          246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTY  275 (433)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~  275 (433)
                                      +..++|+|||+++.
T Consensus       463 ----------------~~~~~liDFGla~~  476 (535)
T PRK09605        463 ----------------DDRLYLIDFGLGKY  476 (535)
T ss_pred             ----------------CCcEEEEeCccccc
Confidence                            23588999998865

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.71  E-value=9.3e-17  Score=142.74  Aligned_cols=134  Identities=23%  Similarity=0.257  Sum_probs=91.2

Q ss_pred             EeeeeccccEEEEEEEECCCCeEEEEEEeecchhh---HH----------------------HHHHHHHHHHHHHhcCCC
Q 013973          102 HSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY---RE----------------------AAMIEIEVLQQLAKHDKG  156 (433)
Q Consensus       102 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~----------------------~~~~E~~~l~~l~~~~~~  156 (433)
                      .+.||+|+||.||+|.+. +++.||||+++.....   ..                      ....|...+..+..... 
T Consensus         2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~-   79 (187)
T cd05119           2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGV-   79 (187)
T ss_pred             CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCC-
Confidence            468999999999999986 7889999998642211   01                      01345556666644321 


Q ss_pred             CCceEEecceeecCCeEEEEEecC-CCCHH-HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCceEee
Q 013973          157 GNRCVQIRNWFDYRNHICIVFEKL-GSSLY-DFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLV  233 (433)
Q Consensus       157 ~~~i~~~~~~~~~~~~~~lV~e~~-~~~L~-~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~ivHrDlKp~NILl~  233 (433)
                        .+...+..    ...++||||+ ++.+. ..+....   .. ..+..++.+++.++.++|. .||+|+||||+||+++
T Consensus        80 --~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~  149 (187)
T cd05119          80 --PVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---LL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD  149 (187)
T ss_pred             --CCCceEec----CCCEEEEEEeCCCCccChhhhhhh---hc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE
Confidence              12222222    2358999999 53322 1222111   11 6678899999999999999 9999999999999994


Q ss_pred             ccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccc
Q 013973          234 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY  275 (433)
Q Consensus       234 ~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~  275 (433)
                                                  ++.++|+|||.+..
T Consensus       150 ----------------------------~~~~~liDfg~a~~  163 (187)
T cd05119         150 ----------------------------DGKVYIIDVPQAVE  163 (187)
T ss_pred             ----------------------------CCcEEEEECccccc
Confidence                                        45678888887754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.71  E-value=5.3e-17  Score=160.25  Aligned_cols=196  Identities=20%  Similarity=0.244  Sum_probs=140.8

Q ss_pred             CCCceEEecceeecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCc-eeccCCCCceEee
Q 013973          156 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM-IHTDLKPENVLLV  233 (433)
Q Consensus       156 ~~~~i~~~~~~~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i-vHrDlKp~NILl~  233 (433)
                      .|.|+.++++.+-+....++|.+|| -|+|.|.+.... ..+++.....++++|+.||.|||.-.| .|+.++..|++++
T Consensus         5 ~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~-~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd   83 (484)
T KOG1023|consen    5 DHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED-IKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVD   83 (484)
T ss_pred             chhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc-cCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceee
Confidence            5678999999999999999999999 899999998743 468899999999999999999998776 9999999999995


Q ss_pred             ccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCC-----CCCceeecCcccchhhhhCCC-------CC
Q 013973          234 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP-----DQNYIVSTRHYRAPEVILGLG-------WT  301 (433)
Q Consensus       234 ~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~-------~~  301 (433)
                      ..                           +.+||.|||+......     ......-..-|.|||.+.+..       .+
T Consensus        84 ~~---------------------------w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~  136 (484)
T KOG1023|consen   84 SR---------------------------WVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALT  136 (484)
T ss_pred             ee---------------------------EEEEechhhhcccccccccccccchhHHHHhccCHHHhccccccccccccc
Confidence            54                           4555555555443321     111112234699999998742       36


Q ss_pred             CcchhHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhh
Q 013973          302 YPCDIWSVGCILVELCTGEALFQTHEN----LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS  377 (433)
Q Consensus       302 ~~~DvwSlGv~l~elltg~~Pf~~~~~----~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  377 (433)
                      .+.|+||||++++|+++...||.....    .+....+.. .+..+                    ..|.          
T Consensus       137 ~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~-~~~~~--------------------~rP~----------  185 (484)
T KOG1023|consen  137 QKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKK-GGSNP--------------------FRPS----------  185 (484)
T ss_pred             ccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHh-cCCCC--------------------cCcc----------
Confidence            779999999999999999999975321    222222211 00000                    0010          


Q ss_pred             hccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHh
Q 013973          378 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL  421 (433)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell  421 (433)
                                +... ....+++..++..||..+|++||+++++-
T Consensus       186 ----------i~~~-~e~~~~l~~l~~~cw~e~P~~rPs~~~i~  218 (484)
T KOG1023|consen  186 ----------IELL-NELPPELLLLVARCWEEIPEKRPSIEQIR  218 (484)
T ss_pred             ----------hhhh-hhcchHHHHHHHHhcccChhhCccHHHHH
Confidence                      0000 02334688899999999999999998774

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.66  E-value=2.2e-15  Score=138.83  Aligned_cols=134  Identities=20%  Similarity=0.187  Sum_probs=95.9

Q ss_pred             eeee-ccccEEEEEEEECCCCeEEEEEEeecc--------------hhhHHHHHHHHHHHHHHHhcCCCCCceEEeccee
Q 013973          103 SKMG-EGTFGQVLECWDRERKEMVAIKIVRGI--------------KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  167 (433)
Q Consensus       103 ~~iG-~G~~g~V~~~~~~~~~~~vAiK~~~~~--------------~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~  167 (433)
                      ..|| .||.|+||.+...  +..++||.+...              ........+|+.++..+.+....   ++..++..
T Consensus        37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~---vP~pl~~~  111 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLP---VPRPIAAR  111 (239)
T ss_pred             ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCC---CceeEeee
Confidence            5677 7888889888764  567999987421              11234567799999999764432   33333332


Q ss_pred             ec-CC---eEEEEEecC-C-CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccC
Q 013973          168 DY-RN---HICIVFEKL-G-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVP  241 (433)
Q Consensus       168 ~~-~~---~~~lV~e~~-~-~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~  241 (433)
                      .. ..   ..++|||++ | .+|.+++...   .+++..    +.||+.+|.+||+.||+||||||+|||++        
T Consensus       112 ~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~--------  176 (239)
T PRK01723        112 VVRHGLFYRADILIERIEGARDLVALLQEA---PLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLD--------  176 (239)
T ss_pred             eeecCcceeeeEEEEecCCCCCHHHHHhcC---CCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEc--------
Confidence            22 22   235999999 5 5898888653   455543    57899999999999999999999999994        


Q ss_pred             CCcCCCCCCCCCcccccCCCCCCEEEEecCCccc
Q 013973          242 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY  275 (433)
Q Consensus       242 dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~  275 (433)
                                         .++.++|+|||.+..
T Consensus       177 -------------------~~~~v~LIDfg~~~~  191 (239)
T PRK01723        177 -------------------PDGKFWLIDFDRGEL  191 (239)
T ss_pred             -------------------CCCCEEEEECCCccc
Confidence                               445799999998765

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.65  E-value=1.2e-15  Score=129.88  Aligned_cols=133  Identities=24%  Similarity=0.314  Sum_probs=105.5

Q ss_pred             EEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecC
Q 013973          101 IHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  180 (433)
Q Consensus       101 ~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~  180 (433)
                      +++.||+|.++.||++....  ..+++|....... ...+..|..+++.+.++   ...+++++.+++..+..+++|||+
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~---~~~~p~~~~~~~~~~~~~~v~e~~   75 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-GADREREVAILQLLARK---GLPVPKVLASGESDGWSYLLMEWI   75 (155)
T ss_pred             cceecccccccceEEEEecC--CeEEEEecCCCCc-hhHHHHHHHHHHHHHHc---CCCCCeEEEEcCCCCccEEEEEec
Confidence            45789999999999998754  6799999865433 45678899999999775   245677777777778899999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCCCceEeeccCccccCCCcCCCCCCCCCccc
Q 013973          181 -GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL---CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  256 (433)
Q Consensus       181 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~  256 (433)
                       |+.+..+         +......++.+++.+|.+||..   +++|+|+||+|||++                       
T Consensus        76 ~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~-----------------------  123 (155)
T cd05120          76 EGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVD-----------------------  123 (155)
T ss_pred             CCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEE-----------------------
Confidence             5555432         4566678899999999999985   699999999999994                       


Q ss_pred             ccCCCCCCEEEEecCCccc
Q 013973          257 KRMPKSSAIKVIDFGSTTY  275 (433)
Q Consensus       257 ~~~~~~~~~kl~Dfg~a~~  275 (433)
                          ..+.++++|||.+..
T Consensus       124 ----~~~~~~l~Df~~~~~  138 (155)
T cd05120         124 ----DGKILGIIDWEYAGY  138 (155)
T ss_pred             ----CCcEEEEEecccccC
Confidence                345688888887764

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.65  E-value=3e-16  Score=155.05  Aligned_cols=259  Identities=21%  Similarity=0.269  Sum_probs=184.4

Q ss_pred             cCcEEEEeeeec--cccEEEEEEEE--CCCCeEEEEEEeec--c-hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           96 TSRYKIHSKMGE--GTFGQVLECWD--RERKEMVAIKIVRG--I-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        96 ~~~~~~~~~iG~--G~~g~V~~~~~--~~~~~~vAiK~~~~--~-~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      ...|.+.+.+|.  |.+|.||.+..  ..++..+|+|.-+.  . ......-.+|+....++    ..|++++..+..++
T Consensus       113 ~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i----~~~~~~v~~~~~~e  188 (524)
T KOG0601|consen  113 DQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKI----DSHENPVRDSPAWE  188 (524)
T ss_pred             hhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhccccc----CccccccccCcccc
Confidence            456888999999  99999999988  88899999997321  1 11122223344433333    35677888888899


Q ss_pred             cCCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHH----HHHHHHHCCceeccCCCCceEeecc-CccccCCC
Q 013973          169 YRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE----CIAFMHDLCMIHTDLKPENVLLVSS-EYIKVPDY  243 (433)
Q Consensus       169 ~~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~----~L~~LH~~~ivHrDlKp~NILl~~~-~~~~i~df  243 (433)
                      ..+..++-+|+++.+|..+.+... ..++...+..++.+...    ||.++|+.+|+|-|+||+||++..+ ...++.||
T Consensus       189 ~~~~lfiqtE~~~~sl~~~~~~~~-~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df  267 (524)
T KOG0601|consen  189 GSGILFIQTELCGESLQSYCHTPC-NFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDF  267 (524)
T ss_pred             cCCcceeeeccccchhHHhhhccc-ccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCc
Confidence            999999999999999999987654 35888999999999999    9999999999999999999999766 55555555


Q ss_pred             cCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 013973          244 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF  323 (433)
Q Consensus       244 g~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf  323 (433)
                      |+..                  +|.|.+++...... ....|..-|++||...+ -++..+|++++|.++.+..+|..++
T Consensus       268 ~~v~------------------~i~~~~~~~~~~~~-~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~  327 (524)
T KOG0601|consen  268 GLVS------------------KISDGNFSSVFKVS-KRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLP  327 (524)
T ss_pred             ceeE------------------EccCCccccceeee-ecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccc
Confidence            5332                  22222222211111 01145667999998766 6789999999999999999987666


Q ss_pred             CCC--ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          324 QTH--ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       324 ~~~--~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      ...  +.+.++..+.     .|                                             .++....+.++..
T Consensus       328 ~~g~~~~W~~~r~~~-----ip---------------------------------------------~e~~~~~s~~l~~  357 (524)
T KOG0601|consen  328 SVGKNSSWSQLRQGY-----IP---------------------------------------------LEFCEGGSSSLRS  357 (524)
T ss_pred             cCCCCCCcccccccc-----Cc---------------------------------------------hhhhcCcchhhhh
Confidence            543  2222111100     01                                             1122234455666


Q ss_pred             HHHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          402 LLQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       402 li~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      .+..|++.+|..|++++.++.|++....
T Consensus       358 ~~~~~~d~~~~~~~~~q~~~~l~~i~s~  385 (524)
T KOG0601|consen  358 VTSQMLDEDPRLRLTAQILTALNVIHSK  385 (524)
T ss_pred             HHHHhcCcchhhhhHHHHHhccccccch
Confidence            8999999999999999999999998754

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.53  E-value=9.5e-14  Score=138.93  Aligned_cols=142  Identities=18%  Similarity=0.215  Sum_probs=94.4

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecchhh--H---------------------------------------HHHH
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY--R---------------------------------------EAAM  141 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--~---------------------------------------~~~~  141 (433)
                      +.||.|++|.||+|+.+ +|+.||||+.+..-..  .                                       -.+.
T Consensus       123 ~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~  201 (437)
T TIGR01982       123 KPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR  201 (437)
T ss_pred             cceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence            57999999999999875 6788999998532100  0                                       0123


Q ss_pred             HHHHHHHHHHhcCCCCCceEEeccee-ecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHH-HHHHHHHC
Q 013973          142 IEIEVLQQLAKHDKGGNRCVQIRNWF-DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLE-CIAFMHDL  218 (433)
Q Consensus       142 ~E~~~l~~l~~~~~~~~~i~~~~~~~-~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~-~L~~LH~~  218 (433)
                      .|...+.++.....+++++ .+...+ +.....+|||||+ |++|.+++..... .++   ...++.+++. .+..+|..
T Consensus       202 ~Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~-~~~---~~~ia~~~~~~~l~ql~~~  276 (437)
T TIGR01982       202 REAANASELGENFKNDPGV-YVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA-GLD---RKALAENLARSFLNQVLRD  276 (437)
T ss_pred             HHHHHHHHHHHhcCCCCCE-EeCCEehhhcCCceEEEEeECCcccccHHHHHhc-CCC---HHHHHHHHHHHHHHHHHhC
Confidence            4555555565444344433 222222 2344579999999 8898887653211 122   2345566655 47889999


Q ss_pred             CceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccC
Q 013973          219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER  277 (433)
Q Consensus       219 ~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~  277 (433)
                      |++|+|+||.||++                           ..++.++++|||++....
T Consensus       277 g~~H~D~hPgNilv---------------------------~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       277 GFFHADLHPGNIFV---------------------------LKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             CceeCCCCcccEEE---------------------------CCCCcEEEEeCCCeeECC
Confidence            99999999999999                           445678888888876543

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.49  E-value=1.1e-13  Score=140.08  Aligned_cols=150  Identities=19%  Similarity=0.306  Sum_probs=95.7

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh-----------------------------------hHH---
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-----------------------------------YRE---  138 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-----------------------------------~~~---  138 (433)
                      ..|.. +.||+|++|.||+|+.+.+|+.||||+.+....                                   ..+   
T Consensus       120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~  198 (537)
T PRK04750        120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH  198 (537)
T ss_pred             HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence            45666 789999999999999998899999999863210                                   011   


Q ss_pred             ---HHHHHHHHHHHHHhcCCCCCceEEeccee-ecCCeEEEEEecC-CCCHHHH--HHhcCC--CCCCHHHHHHHHHHHH
Q 013973          139 ---AAMIEIEVLQQLAKHDKGGNRCVQIRNWF-DYRNHICIVFEKL-GSSLYDF--LRKNNY--RSFPIDLVREIARQLL  209 (433)
Q Consensus       139 ---~~~~E~~~l~~l~~~~~~~~~i~~~~~~~-~~~~~~~lV~e~~-~~~L~~~--l~~~~~--~~l~~~~~~~i~~qi~  209 (433)
                         .+..|...+.++.....+.+ .+.+...+ +.....+|||||+ |+.+.++  +...+.  ..+.+..+..++.|++
T Consensus       199 ~ElD~~~Ea~N~~~~~~~f~~~~-~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif  277 (537)
T PRK04750        199 DELDLMREAANASQLRRNFEDSD-MLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF  277 (537)
T ss_pred             HhhCHHHHHHHHHHHHHHccCCC-CeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence               12334444555544332222 23333333 2345678999999 8898774  333221  1234444445555554


Q ss_pred             HHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCC
Q 013973          210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP  278 (433)
Q Consensus       210 ~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~  278 (433)
                             ..|++|+|+||.||+++.+|                       ...+.++++|||+......
T Consensus       278 -------~~GffHaDpHPGNIlv~~~g-----------------------~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        278 -------RDGFFHADMHPGNIFVSYDP-----------------------PENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             -------hCCeeeCCCChHHeEEecCC-----------------------CCCCeEEEEecceEEECCH
Confidence                   58999999999999996554                       2334788888887765543

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.47  E-value=1.1e-12  Score=115.99  Aligned_cols=136  Identities=18%  Similarity=0.193  Sum_probs=97.6

Q ss_pred             eeeeccccEEEEEEEECC------CCeEEEEEEeecc-------------h----------hhH----HHHHHHHHHHHH
Q 013973          103 SKMGEGTFGQVLECWDRE------RKEMVAIKIVRGI-------------K----------KYR----EAAMIEIEVLQQ  149 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~------~~~~vAiK~~~~~-------------~----------~~~----~~~~~E~~~l~~  149 (433)
                      ..||.|--+.||.|....      .+..+|||+.+..             +          ...    .....|...|++
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            578999999999998654      3578999987410             0          011    122379999999


Q ss_pred             HHhcCCCCCceEEecceeecCCeEEEEEecCCC-CHH-HHHHhcCCCCCCHHHHHHHHHHHHHHHHHH-HHCCceeccCC
Q 013973          150 LAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGS-SLY-DFLRKNNYRSFPIDLVREIARQLLECIAFM-HDLCMIHTDLK  226 (433)
Q Consensus       150 l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~~~-~L~-~~l~~~~~~~l~~~~~~~i~~qi~~~L~~L-H~~~ivHrDlK  226 (433)
                      +.......|.++.   .    ..-+|||||+++ ++. ..|...   .++...+..+..+++.+|..| |+.||||+||+
T Consensus        83 l~~~Gv~vP~pi~---~----~~~~lvME~Ig~~~~~~~~Lkd~---~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs  152 (197)
T cd05146          83 MQKAGIPCPEVVV---L----KKHVLVMSFIGDDQVPAPKLKDA---KLNDEEMKNAYYQVLSMMKQLYKECNLVHADLS  152 (197)
T ss_pred             HHHcCCCCCeEEE---e----cCCEEEEEEcCCCCccchhhhcc---ccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            9887655554443   2    445799999954 332 223221   356667778899999999999 89999999999


Q ss_pred             CCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCcccc
Q 013973          227 PENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE  276 (433)
Q Consensus       227 p~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~  276 (433)
                      +.|||+.                            ++.+.|+|||.+...
T Consensus       153 ~~NIL~~----------------------------~~~v~iIDF~qav~~  174 (197)
T cd05146         153 EYNMLWH----------------------------DGKVWFIDVSQSVEP  174 (197)
T ss_pred             HHHEEEE----------------------------CCcEEEEECCCceeC
Confidence            9999994                            245899999987643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.43  E-value=8e-13  Score=115.33  Aligned_cols=128  Identities=16%  Similarity=0.085  Sum_probs=91.4

Q ss_pred             EeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecC-
Q 013973          102 HSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-  180 (433)
Q Consensus       102 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~-  180 (433)
                      ++.|+.|.++.||++...  ++.|++|+.............|..+++.+.....    +.+++....  ...++|||++ 
T Consensus         3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~----~P~~~~~~~--~~~~lv~e~i~   74 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTELLINRENEAENSKLAAEAGI----GPKLYYFDP--ETGVLITEFIE   74 (170)
T ss_pred             eeecCCcccCceEEEEEC--CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCC----CCceEEEeC--CCCeEEEEecC
Confidence            477899999999999864  6779999876433223345678999998866432    233444332  2347999999 


Q ss_pred             CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCc-----eeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          181 GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM-----IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       181 ~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i-----vHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      |.++.+.          ......++.+++.+|..||+.++     +|+|+||.||+++                      
T Consensus        75 G~~l~~~----------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~----------------------  122 (170)
T cd05151          75 GSELLTE----------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD----------------------  122 (170)
T ss_pred             CCccccc----------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE----------------------
Confidence            6665432          01123457899999999999885     9999999999994                      


Q ss_pred             cccCCCCCCEEEEecCCccc
Q 013973          256 FKRMPKSSAIKVIDFGSTTY  275 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~  275 (433)
                            ++.++++|||.+..
T Consensus       123 ------~~~~~liDf~~a~~  136 (170)
T cd05151         123 ------DGRLWLIDWEYAGM  136 (170)
T ss_pred             ------CCeEEEEecccccC
Confidence                  34588999987753

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.38  E-value=2.9e-13  Score=134.05  Aligned_cols=249  Identities=21%  Similarity=0.171  Sum_probs=167.9

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEEC-CCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDR-ERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~-~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      ...+|..+..||.|.|+.|+.+... .++..|++|.+.+.   ...+.....|+.+...+..    |.+++.....|...
T Consensus       263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~----~~~~~g~~~~W~~~  338 (524)
T KOG0601|consen  263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGS----HLPSVGKNSSWSQL  338 (524)
T ss_pred             ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhc----ccccCCCCCCcccc
Confidence            4567999999999999999988755 67788999976522   2222333456666655543    23456656666666


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      ...|+=.||| ++++...+...  ..+++...+++..|++.++.++|+..++|+|+||+||++.++|             
T Consensus       339 r~~~ip~e~~~~~s~~l~~~~~--~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~-------------  403 (524)
T KOG0601|consen  339 RQGYIPLEFCEGGSSSLRSVTS--QMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDG-------------  403 (524)
T ss_pred             ccccCchhhhcCcchhhhhHHH--HhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccch-------------
Confidence            7777999999 77776555322  2588889999999999999999999999999999999996642             


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCccc--chhhhhCCCCCCcchhHHHHHHHHHHHhCCCC-CCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR--APEVILGLGWTYPCDIWSVGCILVELCTGEAL-FQTH  326 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P-f~~~  326 (433)
                                   ...++.|||..+...-......++..++  +++......+..+.|++|||.-+.+.++|... ..+.
T Consensus       404 -------------~~~~~~~~~~~t~~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~  470 (524)
T KOG0601|consen  404 -------------FFSKLGDFGCWTRLAFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV  470 (524)
T ss_pred             -------------hhhhccccccccccceecccccccccccccchhhccccccccccccccccccccccccCcccCcccc
Confidence                         2345555555432111111112233334  55555566788999999999999999998642 2211


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      ..                           ..+..+...-                          ......++..+...+
T Consensus       471 ~~---------------------------~~i~~~~~p~--------------------------~~~~~~~~q~~~kv~  497 (524)
T KOG0601|consen  471 QS---------------------------LTIRSGDTPN--------------------------LPGLKLQLQVLLKVM  497 (524)
T ss_pred             cc---------------------------eeeecccccC--------------------------CCchHHhhhhhhhhh
Confidence            10                           0111221110                          112235677888999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      +..++..|+.+.++..|.=|-.
T Consensus       498 ~~~~~~~~~l~~~l~~~~~~~~  519 (524)
T KOG0601|consen  498 INPDRKRRPSAVELSLHSEFYR  519 (524)
T ss_pred             cCCccccchhhhhhcccchhhh
Confidence            9999999999999988876543

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.36  E-value=1.4e-12  Score=119.89  Aligned_cols=200  Identities=18%  Similarity=0.279  Sum_probs=132.6

Q ss_pred             CCceEEecceeecC-----CeEEEEEecC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCC
Q 013973          157 GNRCVQIRNWFDYR-----NHICIVFEKL-GSSLYDFLRKNN--YRSFPIDLVREIARQLLECIAFMHDLC--MIHTDLK  226 (433)
Q Consensus       157 ~~~i~~~~~~~~~~-----~~~~lV~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlK  226 (433)
                      |.|++++..++.+.     ....++.||| .|+|..+|+...  ...+......+|..||+.||.|||+..  |+|+.+.
T Consensus       126 HsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlT  205 (458)
T KOG1266|consen  126 HSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLT  205 (458)
T ss_pred             HHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcc
Confidence            45688998888754     3588999999 999999998532  356888888999999999999999876  9999999


Q ss_pred             CCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchh
Q 013973          227 PENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDI  306 (433)
Q Consensus       227 p~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv  306 (433)
                      .+-|++..+|-+||.---....             ...++.+       .........|-++|.|||.=.....+.++||
T Consensus       206 c~tifiq~ngLIkig~~ap~s~-------------h~s~~~~-------~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dI  265 (458)
T KOG1266|consen  206 CDTIFIQHNGLIKIGSVAPDST-------------HPSVNST-------REAEKSVNTSLPGFSAPESGTTTNTTGASDI  265 (458)
T ss_pred             hhheeecCCceEEecccCcccc-------------chhhhhh-------hHhhhhccccCCccccCCcCcccccccchhh
Confidence            9999996655554421000000             0000000       0001122346788999998776677889999


Q ss_pred             HHHHHHHHHHHhCCCC-CCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHH
Q 013973          307 WSVGCILVELCTGEAL-FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ  385 (433)
Q Consensus       307 wSlGv~l~elltg~~P-f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (433)
                      |+||....||..|..- -.+.+..+.-..+...                   +                           
T Consensus       266 y~fgmcAlemailEiq~tnseS~~~~ee~ia~~-------------------i---------------------------  299 (458)
T KOG1266|consen  266 YKFGMCALEMAILEIQSTNSESKVEVEENIANV-------------------I---------------------------  299 (458)
T ss_pred             hhhhHHHHHHHHheeccCCCcceeehhhhhhhh-------------------e---------------------------
Confidence            9999999999887632 2221111000000000                   0                           


Q ss_pred             HHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          386 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       386 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                         ..   -....-++++.+||+-.|..||+|.++|.||-+-+
T Consensus       300 ---~~---len~lqr~~i~kcl~~eP~~rp~ar~llfHpllfe  336 (458)
T KOG1266|consen  300 ---IG---LENGLQRGSITKCLEGEPNGRPDARLLLFHPLLFE  336 (458)
T ss_pred             ---ee---ccCccccCcCcccccCCCCCCcchhhhhcCceeee
Confidence               00   00112356899999999999999999999997643

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.25  E-value=3.1e-10  Score=96.84  Aligned_cols=145  Identities=23%  Similarity=0.174  Sum_probs=105.8

Q ss_pred             EEeeeeccccEEEEEEEECCCCeEEEEEEee-c--------chhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973          101 IHSKMGEGTFGQVLECWDRERKEMVAIKIVR-G--------IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus       101 ~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~-~--------~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .+..|-+|+-+.|+++..  .|+.+.||.-. +        .+-.+.+...|+.+|.++.......|.+   +  +.+..
T Consensus        11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l---~--~~D~~   83 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRL---I--FIDTY   83 (229)
T ss_pred             cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE---E--EEecC
Confidence            567888999999999965  57777777431 1        1233556678999999997765444433   2  23334


Q ss_pred             eEEEEEecCCC--CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          172 HICIVFEKLGS--SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       172 ~~~lV~e~~~~--~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      .-.|+|||+.|  ++.+++...............++..|=..|.-||..+|||+||..+||++.++|             
T Consensus        84 ~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~-------------  150 (229)
T KOG3087|consen   84 GGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDG-------------  150 (229)
T ss_pred             CCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCC-------------
Confidence            45688999955  889998876543344444477888888899999999999999999999997653             


Q ss_pred             CCCCcccccCCCCCCEEEEecCCcccc
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYE  276 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~  276 (433)
                                 ....+.++|||++...
T Consensus       151 -----------~~~~~~lIdfgls~~s  166 (229)
T KOG3087|consen  151 -----------NQITPILIDFGLSSVS  166 (229)
T ss_pred             -----------CcCceEEEeecchhcc
Confidence                       3456799999998653

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.21  E-value=1.2e-10  Score=106.03  Aligned_cols=107  Identities=17%  Similarity=0.141  Sum_probs=73.4

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecchh--hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC---CeEEEEE
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR---NHICIVF  177 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~---~~~~lV~  177 (433)
                      +.||.|..+.||++.... |+.|++|+......  .......|.++++.+......   +.+++.+....   +..++||
T Consensus         4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~---vp~~~~~~~~~~~~~~~~~v~   79 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVP---VPKVLALCEDPSVLGTPFYVM   79 (223)
T ss_pred             eecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCC---CCCEEEECCCCCccCCceEEE
Confidence            678999999999998754 57799998764332  345678899999999764322   34444444432   3678999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 013973          178 EKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH  216 (433)
Q Consensus       178 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH  216 (433)
                      ||+ |.++.+.+..   ..++......++.+++.+|..||
T Consensus        80 e~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH  116 (223)
T cd05154          80 ERVDGRVLRDRLLR---PELSPEERRALARALADTLAALH  116 (223)
T ss_pred             EEeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHh
Confidence            999 6666554321   14666666777777777777777

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=99.14  E-value=3.1e-09  Score=99.23  Aligned_cols=142  Identities=18%  Similarity=0.063  Sum_probs=97.5

Q ss_pred             EEEEEEECCCCeEEEEEEeecchh------------hHHHHHHHHHHHHHHHhcCCCCCceEEecceeec--CCeEEEEE
Q 013973          112 QVLECWDRERKEMVAIKIVRGIKK------------YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY--RNHICIVF  177 (433)
Q Consensus       112 ~V~~~~~~~~~~~vAiK~~~~~~~------------~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~--~~~~~lV~  177 (433)
                      .|+++..  .|+.|.||.......            ....+..|...+.++.......|.++-+...-..  ...-+|||
T Consensus        37 rvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt  114 (268)
T PRK15123         37 RTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT  114 (268)
T ss_pred             eEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence            3555533  466788886643221            0113678999999998876665655444221111  34578999


Q ss_pred             ecCCC--CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          178 EKLGS--SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       178 e~~~~--~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      |++++  +|.+++........+......++.+++..+.-||..||+|+|+++.|||++.+..                  
T Consensus       115 e~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~------------------  176 (268)
T PRK15123        115 EDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFP------------------  176 (268)
T ss_pred             eeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEecccc------------------
Confidence            99944  7999986533235667778899999999999999999999999999999963100                  


Q ss_pred             cccCCCCCCEEEEecCCccc
Q 013973          256 FKRMPKSSAIKVIDFGSTTY  275 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~  275 (433)
                        ...+...+.++||+.+..
T Consensus       177 --~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        177 --GREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             --CCCCCceEEEEECCcccc
Confidence              002356799999998753

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.12  E-value=1.7e-09  Score=92.79  Aligned_cols=130  Identities=20%  Similarity=0.202  Sum_probs=91.2

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEe-ec--------chhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIV-RG--------IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~-~~--------~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      ..|++|+-+.+|.+...  |..+++|.= ++        .+-.......|..++.++.....+.|   .++.+  +....
T Consensus         2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P---~v~dv--D~~~~   74 (204)
T COG3642           2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVP---IVYDV--DPDNG   74 (204)
T ss_pred             chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCC---eEEEE--cCCCC
Confidence            45789999999998653  333666642 11        11224556779999999877654433   33333  34556


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      .|+|||+ |..|.+++...         ...++..|=.-+.-||..||||+||.++||++..                  
T Consensus        75 ~I~me~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~------------------  127 (204)
T COG3642          75 LIVMEYIEGELLKDALEEA---------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSG------------------  127 (204)
T ss_pred             EEEEEEeCChhHHHHHHhc---------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeC------------------
Confidence            7999999 66777788764         1345566666678899999999999999999942                  


Q ss_pred             CcccccCCCCCCEEEEecCCcccc
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYE  276 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~  276 (433)
                                ..+.++|||++...
T Consensus       128 ----------~~i~~IDfGLg~~s  141 (204)
T COG3642         128 ----------GRIYFIDFGLGEFS  141 (204)
T ss_pred             ----------CcEEEEECCccccc
Confidence                      34899999998753

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.05  E-value=2.1e-09  Score=108.05  Aligned_cols=182  Identities=16%  Similarity=0.260  Sum_probs=122.0

Q ss_pred             EEEEeeeeccccEEEE-EEEECCCCeEEEEEEeecchh-hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEE
Q 013973           99 YKIHSKMGEGTFGQVL-ECWDRERKEMVAIKIVRGIKK-YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  176 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~-~~~~~~~~~~vAiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV  176 (433)
                      |.+ ....-++.+ +| .|..+.++..|.|...+.... ..+...+-++.|+.+     .||+|++++..++..+.+|||
T Consensus        15 Y~l-e~~~~~~~a-~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtl-----RHP~Il~yL~t~e~~~~~ylv   87 (690)
T KOG1243|consen   15 YDL-EETAFSSEA-LWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTL-----RHPNILSYLDTTEEEGTLYLV   87 (690)
T ss_pred             ccc-ccccCCCcc-cccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhc-----cCchhhhhhhhhcccCceEEE
Confidence            444 333344444 34 466677788888888764333 223344456666666     679999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-HCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          177 FEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH-DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       177 ~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH-~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      +|-+. -|..++..     +.......-+.||+.||.||| ..+++|++|.-+-|+++..|.+||.+|.+....+     
T Consensus        88 TErV~-Pl~~~lk~-----l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~-----  156 (690)
T KOG1243|consen   88 TERVR-PLETVLKE-----LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKAS-----  156 (690)
T ss_pred             eeccc-cHHHHHHH-----hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccc-----
Confidence            99873 35556654     336677788999999999998 4569999999999999887777776654332111     


Q ss_pred             cccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhC
Q 013973          256 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG  319 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg  319 (433)
                                   +|+-      ......---.|..|+.+....  ...|.|-|||+++|++.|
T Consensus       157 -------------~~~~------~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  157 -------------GFNA------PAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             -------------cCCc------ccccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCc
Confidence                         1110      001111112356666543322  457999999999999999

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.04  E-value=1.2e-09  Score=96.27  Aligned_cols=127  Identities=26%  Similarity=0.304  Sum_probs=79.1

Q ss_pred             EEEEEEECCCCeEEEEEEeecc---------------------------hhhHHHHHHHHHHHHHHHhcCCCCCceEEec
Q 013973          112 QVLECWDRERKEMVAIKIVRGI---------------------------KKYREAAMIEIEVLQQLAKHDKGGNRCVQIR  164 (433)
Q Consensus       112 ~V~~~~~~~~~~~vAiK~~~~~---------------------------~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~  164 (433)
                      .||.|... .|..+|+|+.+..                           .........|...|.++.......|   ..+
T Consensus         1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP---~p~   76 (188)
T PF01163_consen    1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVP---KPY   76 (188)
T ss_dssp             EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS-----EE
T ss_pred             CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCC---cEE
Confidence            38989874 5678999987410                           0112345678899998876543334   443


Q ss_pred             ceeecCCeEEEEEecCC--CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHH-HHHCCceeccCCCCceEeeccCccccC
Q 013973          165 NWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECIAF-MHDLCMIHTDLKPENVLLVSSEYIKVP  241 (433)
Q Consensus       165 ~~~~~~~~~~lV~e~~~--~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~-LH~~~ivHrDlKp~NILl~~~~~~~i~  241 (433)
                      .+.    .-+|||||++  |.....|....   ++......++.+++..+.. +|+.||||+||.+.|||++.       
T Consensus        77 ~~~----~~~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~-------  142 (188)
T PF01163_consen   77 DYN----RNVIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDD-------  142 (188)
T ss_dssp             EEE----TTEEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEET-------
T ss_pred             EEe----CCEEEEEecCCCccchhhHHhcc---ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeec-------
Confidence            332    2369999996  64444444332   3345567788888886665 57999999999999999942       


Q ss_pred             CCcCCCCCCCCCcccccCCCCCCEEEEecCCccccC
Q 013973          242 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER  277 (433)
Q Consensus       242 dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~  277 (433)
                                          + .+.|+|||.+....
T Consensus       143 --------------------~-~~~iIDf~qav~~~  157 (188)
T PF01163_consen  143 --------------------G-KVYIIDFGQAVDSS  157 (188)
T ss_dssp             --------------------T-CEEE--GTTEEETT
T ss_pred             --------------------c-eEEEEecCcceecC
Confidence                                2 79999999876543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.01  E-value=9.8e-11  Score=117.92  Aligned_cols=166  Identities=20%  Similarity=0.326  Sum_probs=112.7

Q ss_pred             HHHHHHHHHHHH-CCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCcee
Q 013973          206 RQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV  284 (433)
Q Consensus       206 ~qi~~~L~~LH~-~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~  284 (433)
                      .+++.||.|+|+ .++||+.|.|++|.++..|.+||+-|+.+.-......        .-...-|+++.-..       .
T Consensus       106 ~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~--------~p~~~yd~~lp~~~-------~  170 (700)
T KOG2137|consen  106 GNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTE--------YPFSEYDPPLPLLL-------Q  170 (700)
T ss_pred             hcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCc--------cccccCCCCCChhh-------c
Confidence            344589999995 5799999999999998888888887775544332211        11222233322211       2


Q ss_pred             ecCcccchhhhhCCCCCCcchhHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcc
Q 013973          285 STRHYRAPEVILGLGWTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL  363 (433)
Q Consensus       285 gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ell-tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~  363 (433)
                      -...|.|||++.....+.++|++|+||++|.+. .|..-+...+...... .......                  .+.+
T Consensus       171 ~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~-~~~~~~~------------------~~~~  231 (700)
T KOG2137|consen  171 PHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYS-FSRNLLN------------------AGAF  231 (700)
T ss_pred             cCcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhh-hhhcccc------------------cccc
Confidence            345799999999988899999999999999998 4555554432221111 1111000                  0000


Q ss_pred             cCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCCCCC
Q 013973          364 DWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL  431 (433)
Q Consensus       364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~~~  431 (433)
                      .                          ....++.++++=|.++|..++.-||++.+++..|||.+.-+
T Consensus       232 ~--------------------------~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~~~  273 (700)
T KOG2137|consen  232 G--------------------------YSNNLPSELRESLKKLLNGDSAVRPTLDLLLSIPFFSDPGL  273 (700)
T ss_pred             c--------------------------ccccCcHHHHHHHHHHhcCCcccCcchhhhhcccccCCchh
Confidence            0                          11467789999999999999999999999999999987543

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.97  E-value=3.4e-08  Score=96.69  Aligned_cols=165  Identities=17%  Similarity=0.226  Sum_probs=120.7

Q ss_pred             cEEEEEEEECCCCeEEEEEEeecchh-hHHHHHHHHHHHHHHHhcCCCCCceEEecceeec----CCeEEEEEecC--CC
Q 013973          110 FGQVLECWDRERKEMVAIKIVRGIKK-YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY----RNHICIVFEKL--GS  182 (433)
Q Consensus       110 ~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~----~~~~~lV~e~~--~~  182 (433)
                      -.+-|+|....+|..|++|.+...+. .......-++..+++     .|.|+|++.+.|.+    +..+++|++|.  .+
T Consensus       289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl-----~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~  363 (655)
T KOG3741|consen  289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKL-----CHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSP  363 (655)
T ss_pred             cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHh-----ccCceeehhhhhhhhccCcceEEEEEecCCCCc
Confidence            45789999999999999999843221 111233346677777     66889999999874    45789999997  66


Q ss_pred             CHHHHHHhc-------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          183 SLYDFLRKN-------------NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       183 ~L~~~l~~~-------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      +|.++....             .+...+++.++.|+.|+..||.++|+.|+.-+-|.|.+||+                 
T Consensus       364 TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv-----------------  426 (655)
T KOG3741|consen  364 TLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILV-----------------  426 (655)
T ss_pred             hHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEe-----------------
Confidence            888765321             12357889999999999999999999999989999999999                 


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE  320 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~  320 (433)
                                .++.+++|..-|+.-....+.    +       |-+.   --.+-|.-.||.+++.|.||.
T Consensus       427 ----------~G~~RIriS~C~i~Dvl~~d~----~-------~~le---~~Qq~D~~~lG~ll~aLAt~~  473 (655)
T KOG3741|consen  427 ----------TGKMRIRISGCGIMDVLQEDP----T-------EPLE---SQQQNDLRDLGLLLLALATGT  473 (655)
T ss_pred             ----------eCcceEEEecccceeeecCCC----C-------cchh---HHhhhhHHHHHHHHHHHhhcc
Confidence                      444467776666544332222    0       1111   134579999999999999995

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.83  E-value=1e-07  Score=91.16  Aligned_cols=129  Identities=17%  Similarity=0.297  Sum_probs=91.9

Q ss_pred             eEEEEEecC-CC-CHHHHHHh----cCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcC
Q 013973          172 HICIVFEKL-GS-SLYDFLRK----NNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  245 (433)
Q Consensus       172 ~~~lV~e~~-~~-~L~~~l~~----~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~  245 (433)
                      ...+.|..+ |. .+.+++.-    ....-..|..+++.+..++.+..-||+.|.+-+|+.++|+|+.+++.+.+.|-  
T Consensus        84 ~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVds--  161 (637)
T COG4248          84 VIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDS--  161 (637)
T ss_pred             eeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcc--
Confidence            367888887 32 44444431    12234689999999999999999999999999999999999976665554431  


Q ss_pred             CCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhh-----CCCCCCcchhHHHHHHHHHHHhC-
Q 013973          246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTG-  319 (433)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg-  319 (433)
                                       ....|++-|.-      ....+|...|.+||.-.     +..-+...|.|.|||++++|+.| 
T Consensus       162 -----------------Dsfqi~~ng~~------~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~gg  218 (637)
T COG4248         162 -----------------DSFQINANGTL------HLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGG  218 (637)
T ss_pred             -----------------cceeeccCCce------EecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcC
Confidence                             01112211111      01236889999999865     23456789999999999999886 


Q ss_pred             CCCCCC
Q 013973          320 EALFQT  325 (433)
Q Consensus       320 ~~Pf~~  325 (433)
                      +.||.+
T Consensus       219 rHPysG  224 (637)
T COG4248         219 RHPYSG  224 (637)
T ss_pred             CCCCCc
Confidence            999986

>PRK09902 hypothetical protein; Provisional

Probab=98.80  E-value=2.8e-07  Score=81.96  Aligned_cols=141  Identities=11%  Similarity=0.107  Sum_probs=101.6

Q ss_pred             eccccEEEEEEEECCCCeEEEEEEeec----c---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec--CCeEEEE
Q 013973          106 GEGTFGQVLECWDRERKEMVAIKIVRG----I---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY--RNHICIV  176 (433)
Q Consensus       106 G~G~~g~V~~~~~~~~~~~vAiK~~~~----~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~--~~~~~lV  176 (433)
                      |+||.+.|+.....  |+.|=+|.-.+    .   ......+..|+..+.++.....+.|.++ +.+.-..  .-..+||
T Consensus        27 ~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV  103 (216)
T PRK09902         27 RRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV  103 (216)
T ss_pred             CCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence            56888889886543  23466665431    1   2245668899999999988776555544 2221111  2346899


Q ss_pred             EecCC--CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          177 FEKLG--SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       177 ~e~~~--~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      +|-++  .+|.+++......+.+......++.+++..|.-||+.|+.|+|+-+.|||++.+|                  
T Consensus       104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g------------------  165 (216)
T PRK09902        104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEG------------------  165 (216)
T ss_pred             EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCC------------------
Confidence            99885  6899998775444567788889999999999999999999999999999995321                  


Q ss_pred             ccccCCCCCCEEEEecCCcc
Q 013973          255 YFKRMPKSSAIKVIDFGSTT  274 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~  274 (433)
                             ...++++||.-++
T Consensus       166 -------~~~v~lIDlEk~r  178 (216)
T PRK09902        166 -------KAEAGFLDLEKSR  178 (216)
T ss_pred             -------CeeEEEEEhhccc
Confidence                   2348999998665

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.78  E-value=1.3e-07  Score=85.25  Aligned_cols=113  Identities=26%  Similarity=0.305  Sum_probs=84.9

Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCceEEecceeec-CCeEEEEEecC-C-CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Q 013973          137 REAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY-RNHICIVFEKL-G-SSLYDFLRKNNYRSFPIDLVREIARQLLECIA  213 (433)
Q Consensus       137 ~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~-~~~~~lV~e~~-~-~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~  213 (433)
                      ......|...+..+......-|..+-+...-.. ....+||+|++ + .+|.+++....  .++......++.+++..+.
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~--~~~~~~~~~ll~~l~~~i~  132 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE--QLDPSQRRELLRALARLIA  132 (206)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc--ccchhhHHHHHHHHHHHHH
Confidence            445778999999998876655555444322111 13568999999 4 37999988644  2667778899999999999


Q ss_pred             HHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccc
Q 013973          214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY  275 (433)
Q Consensus       214 ~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~  275 (433)
                      -||+.||+|+|+++.|||++.++                        ....+.++||+.+..
T Consensus       133 ~lH~~gi~H~Dl~~~NILv~~~~------------------------~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  133 KLHDAGIYHGDLNPSNILVDPDD------------------------GQYRFYLIDLDRMRF  170 (206)
T ss_pred             HHHHCcCCCCCCCcccEEEeCCC------------------------CceeEEEEcchhcee
Confidence            99999999999999999996432                        234789999987764

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.65  E-value=4e-07  Score=82.97  Aligned_cols=134  Identities=28%  Similarity=0.336  Sum_probs=92.4

Q ss_pred             EEEEeeeeccccEEEEEEEECCCCeEEEEEEeec-------ch----------------hhHHHHHHHHHHHHHHHhcCC
Q 013973           99 YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG-------IK----------------KYREAAMIEIEVLQQLAKHDK  155 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~-------~~----------------~~~~~~~~E~~~l~~l~~~~~  155 (433)
                      ..+..+||-|--+.||.|.+. .|..+|||.-+.       .+                -.+..+.+|.++|+++.....
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~  171 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV  171 (304)
T ss_pred             HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence            457789999999999999886 567799997531       00                113445679999999865422


Q ss_pred             CCCceEEecceeecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeec
Q 013973          156 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVS  234 (433)
Q Consensus       156 ~~~~i~~~~~~~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~  234 (433)
                      .   +..-++    .+...+|||++ |-.|...       +++.+.+..++..|+.-+.-+-..||||+|+.+=|||+  
T Consensus       172 ~---VP~P~~----~nRHaVvMe~ieG~eL~~~-------r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV--  235 (304)
T COG0478         172 K---VPKPIA----WNRHAVVMEYIEGVELYRL-------RLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILV--  235 (304)
T ss_pred             C---CCCccc----cccceeeeehcccceeecc-------cCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEE--
Confidence            2   222222    24557999999 5444321       23455566666667666666668999999999999999  


Q ss_pred             cCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCcc
Q 013973          235 SEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT  274 (433)
Q Consensus       235 ~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~  274 (433)
                                               ++++.+.++||-.+.
T Consensus       236 -------------------------~~dg~~~vIDwPQ~v  250 (304)
T COG0478         236 -------------------------TEDGDIVVIDWPQAV  250 (304)
T ss_pred             -------------------------ecCCCEEEEeCcccc
Confidence                                     455678888886554

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.63  E-value=2.1e-09  Score=107.39  Aligned_cols=246  Identities=15%  Similarity=0.057  Sum_probs=162.7

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCc-eEEecceeecCCeEEEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR-CVQIRNWFDYRNHICIV  176 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~-i~~~~~~~~~~~~~~lV  176 (433)
                      .+.....+++|+++++++.+...+...+ .+.+...    .....++++|.++     ++|+ .+..++.++.+.+..++
T Consensus       243 ws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~----l~~rl~~eLLdK~-----n~P~~~v~~~~d~~~E~~~~i~  312 (829)
T KOG0576|consen  243 WSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT----LSRRLAIELLDKV-----NNPNPVVRYLEDYDGEDYLWIP  312 (829)
T ss_pred             chHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc----hhhHHHHHHHHHc-----cCCCCcccccccCCcccccchh
Confidence            4556677899999999999887776655 7766533    3345578888888     5566 66667777778899999


Q ss_pred             EecC-CC-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          177 FEKL-GS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       177 ~e~~-~~-~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      |+++ ++ +-..-..... ..+..-+...+...-.++|+++|+.-=+|+|    |||..+                    
T Consensus       313 ~~i~s~~rs~~~~~~~se-~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~--------------------  367 (829)
T KOG0576|consen  313 MRICSTGRSSALEMTVSE-IALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE--------------------  367 (829)
T ss_pred             hhhhcCCccccccCChhh-HhhhhhhhhhhhhhhcccccccccccccCcc----cccccc--------------------
Confidence            9999 43 2111110000 0122333444556667889999988779998    888643                    


Q ss_pred             ccccCCCCCCEEEEecCCccccCCC--CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL  332 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~  332 (433)
                              ...+..||+........  .....+|+.++|||++....+....|.|++|+-..++.-|.+|-...-.  . 
T Consensus       368 --------~~~~~~~~~v~~~L~~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~P~~--~-  436 (829)
T KOG0576|consen  368 --------EEVKLLDFAVPPQLTRTMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSSPPA--V-  436 (829)
T ss_pred             --------cccccccccCCcccCcccccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCCCcc--c-
Confidence                    44677777776655544  4556899999999999999999999999999877777777766543100  0 


Q ss_pred             HHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCC
Q 013973          333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPT  412 (433)
Q Consensus       333 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  412 (433)
                                                    ...+....+...+...           ..+..  ..-.++...|+..-|.
T Consensus       437 ------------------------------~~~~g~~p~s~~L~~~-----------~aw~~--~~~~~~~~~~~~g~P~  473 (829)
T KOG0576|consen  437 ------------------------------LPMIGNGPNSPMLTDK-----------SAWSP--VFHRDFPAPCLNGLPP  473 (829)
T ss_pred             ------------------------------cCCCCCCCCccccchh-----------hhcCc--ccccCCcccccCCCCC
Confidence                                          0000000000000000           00000  0112577899999999


Q ss_pred             CCCCHHHHhcCCCCCCCCCC
Q 013973          413 DRLTAREALRHPFFTRDHLR  432 (433)
Q Consensus       413 ~R~ta~ell~hp~f~~~~~~  432 (433)
                      .|+.+..++-|.+|...++|
T Consensus       474 ~pkv~mgacfsKvfngCpl~  493 (829)
T KOG0576|consen  474 TPKVHMGACFSKVFNGCPLR  493 (829)
T ss_pred             CCcchhhHHHHHHhccCccc
Confidence            99999999999999998876

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.62  E-value=9.2e-07  Score=79.83  Aligned_cols=137  Identities=16%  Similarity=0.137  Sum_probs=93.1

Q ss_pred             EEeeeeccccEEEEEEEECCCCeEEEEEEeecchhh-------------------------HHHHHHHHHHHHHHHhcCC
Q 013973          101 IHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY-------------------------REAAMIEIEVLQQLAKHDK  155 (433)
Q Consensus       101 ~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~-------------------------~~~~~~E~~~l~~l~~~~~  155 (433)
                      +...|++|--+.||+|.. .++..+|+|+++.....                         ..-...|..-|+++.....
T Consensus        52 ~~g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGV  130 (268)
T COG1718          52 LVGCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGV  130 (268)
T ss_pred             eEeeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            334677888889999975 45678999998522111                         1123457888888877654


Q ss_pred             CCCceEEecceeecCCeEEEEEecCCCCH--HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCceEe
Q 013973          156 GGNRCVQIRNWFDYRNHICIVFEKLGSSL--YDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLL  232 (433)
Q Consensus       156 ~~~~i~~~~~~~~~~~~~~lV~e~~~~~L--~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~ivHrDlKp~NILl  232 (433)
                      ..|   +-+.+.    .-.|||||+|..-  .-.|...   .+..+++..+..++++.+.-|-. .++||+||..=|||+
T Consensus       131 rvP---~Pi~~~----~nVLvMEfIg~~g~pAP~LkDv---~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~  200 (268)
T COG1718         131 RVP---EPIAFR----NNVLVMEFIGDDGLPAPRLKDV---PLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILV  200 (268)
T ss_pred             CCC---Cceeec----CCeEEEEeccCCCCCCCCcccC---CcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEE
Confidence            333   222222    2359999996541  1122222   24444788889999999988876 899999999999999


Q ss_pred             eccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCcccc
Q 013973          233 VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE  276 (433)
Q Consensus       233 ~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~  276 (433)
                      .                            ++.+.|+|||.+...
T Consensus       201 ~----------------------------~~~p~iID~~QaV~~  216 (268)
T COG1718         201 H----------------------------DGEPYIIDVSQAVTI  216 (268)
T ss_pred             E----------------------------CCeEEEEECcccccc
Confidence            3                            456899999988643

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.60  E-value=1.6e-07  Score=94.94  Aligned_cols=128  Identities=16%  Similarity=0.215  Sum_probs=80.8

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecchh-----------------------------------h------HHHHH
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-----------------------------------Y------REAAM  141 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-----------------------------------~------~~~~~  141 (433)
                      +.|+.++-|.||+|+.+. |+.||||+.+..-.                                   .      .-.+.
T Consensus       131 ~PiAsASIaQVH~A~L~s-G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~  209 (517)
T COG0661         131 EPIASASIAQVHRAVLKS-GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR  209 (517)
T ss_pred             CchhhhhHhhheeEEecC-CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence            679999999999999875 88999999741100                                   0      01123


Q ss_pred             HHHHHHHHHHhcCCCCCceEEecce-eecCCeEEEEEecC-CCCHHHH--HHhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013973          142 IEIEVLQQLAKHDKGGNRCVQIRNW-FDYRNHICIVFEKL-GSSLYDF--LRKNNYRSFPIDLVREIARQLLECIAFMHD  217 (433)
Q Consensus       142 ~E~~~l~~l~~~~~~~~~i~~~~~~-~~~~~~~~lV~e~~-~~~L~~~--l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~  217 (433)
                      .|...+.+++....+.+.+ .+-.. ++..+.-.|+|||+ |-.+.+.  +...   .++...+.....++  -+.-+=.
T Consensus       210 ~EA~n~~~~~~nf~~~~~v-~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~---g~d~k~ia~~~~~~--f~~q~~~  283 (517)
T COG0661         210 REAANAERFRENFKDDPDV-YVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSA---GIDRKELAELLVRA--FLRQLLR  283 (517)
T ss_pred             HHHHHHHHHHHHcCCCCCe-EeceeehhccCCcEEEEEeeCCEecccHHHHHhc---CCCHHHHHHHHHHH--HHHHHHh
Confidence            4666666666665555543 33333 34456678999999 7777776  4443   35533332222222  1333345


Q ss_pred             CCceeccCCCCceEeeccCc
Q 013973          218 LCMIHTDLKPENVLLVSSEY  237 (433)
Q Consensus       218 ~~ivHrDlKp~NILl~~~~~  237 (433)
                      .|+.|.|.+|.||+++.+|.
T Consensus       284 dgffHaDpHpGNi~v~~~g~  303 (517)
T COG0661         284 DGFFHADPHPGNILVRSDGR  303 (517)
T ss_pred             cCccccCCCccceEEecCCc
Confidence            89999999999999955443

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.57  E-value=1.4e-06  Score=79.72  Aligned_cols=82  Identities=21%  Similarity=0.213  Sum_probs=57.6

Q ss_pred             EeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecC-
Q 013973          102 HSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-  180 (433)
Q Consensus       102 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~-  180 (433)
                      ++.|+.|..+.||++.... + .+++|..... ........|..+++.+..+....|.++............+++|+++ 
T Consensus         2 i~~l~~G~~n~~~~v~~~~-~-~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~   78 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD-G-RYVLKFYRPP-DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP   78 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT-S-EEEEEEESSH-HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred             CccCCCCCeeeEEEEEECC-c-EEEEEEeCCC-CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence            5789999999999998765 3 6999988654 4556777899999999876543344433222233445689999999 


Q ss_pred             CCCHHH
Q 013973          181 GSSLYD  186 (433)
Q Consensus       181 ~~~L~~  186 (433)
                      |..+..
T Consensus        79 g~~~~~   84 (239)
T PF01636_consen   79 GRPLDD   84 (239)
T ss_dssp             SEEHHH
T ss_pred             cccccc
Confidence            666655

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.55  E-value=2e-06  Score=76.82  Aligned_cols=127  Identities=19%  Similarity=0.206  Sum_probs=80.4

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHH----------HHHHHHHHHHHHHhcCCCCC---ceE
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYRE----------AAMIEIEVLQQLAKHDKGGN---RCV  161 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~----------~~~~E~~~l~~l~~~~~~~~---~i~  161 (433)
                      +.++|++++.+-......|.+-.  ..|+.+++|..+......+          ...+++..+..+....-..+   .++
T Consensus        29 ~~~~~~~~kv~k~~~r~~ValIe--i~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~  106 (229)
T PF06176_consen   29 LDNNYKIIKVFKNTKRNYVALIE--IDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA  106 (229)
T ss_pred             HhCCceEEEeecCCCccEEEEEE--ECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence            45689999999888777777664  3567799998763221111          12234444444433221111   222


Q ss_pred             EecceeecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEee
Q 013973          162 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV  233 (433)
Q Consensus       162 ~~~~~~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~  233 (433)
                      .....+......+|||||+ |..|.++..      +++    .+...|..++.-||+.|++|+|.+|.|++++
T Consensus       107 ~ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~  169 (229)
T PF06176_consen  107 AEKKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVS  169 (229)
T ss_pred             eeeeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEE
Confidence            2222333345667999999 777766532      333    2446677789999999999999999999995

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.42  E-value=4.6e-06  Score=76.24  Aligned_cols=72  Identities=11%  Similarity=0.122  Sum_probs=50.7

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecCCC
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGS  182 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~~~  182 (433)
                      ..||+|..+.||+.    .+..+++|+..... .......|.+++..+.......   ...+.+.+..+...+|||++.|
T Consensus         7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~-~~~~i~~E~~~l~~l~~~glpv---P~~~~~~~~~~~~glv~e~i~G   78 (226)
T TIGR02172         7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF-DKETIKREFDASRKVFSLGIPT---PHPFDLVEDGGRLGLIYELIVG   78 (226)
T ss_pred             eeecCCCCcceeEe----cCCCEEEEeCCCCC-CHHHHHHHHHHHHHHHHcCCCC---CceEEEEecCCeeeeeeeecCC
Confidence            57899999999984    23457899876422 3345678999999987654333   4445555666778899999933

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=98.35  E-value=1.3e-05  Score=71.38  Aligned_cols=123  Identities=15%  Similarity=0.252  Sum_probs=91.8

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecch-----------------hhHHHHHHHHHHHHHHH-hcCCCCCceEEec
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-----------------KYREAAMIEIEVLQQLA-KHDKGGNRCVQIR  164 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-----------------~~~~~~~~E~~~l~~l~-~~~~~~~~i~~~~  164 (433)
                      ..||+|+.-.||.-   ..+....||+++...                 ....+...|+.....+. .....+.+|..++
T Consensus         7 ~~i~~G~~R~cy~H---P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~   83 (199)
T PF10707_consen    7 DLIAQGGERDCYQH---PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY   83 (199)
T ss_pred             cccccCCCceEEEC---CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence            57899999999964   233447899886433                 22466777888888887 6666778899999


Q ss_pred             ceeecCCeEEEEEecC---C----CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeecc
Q 013973          165 NWFDYRNHICIVFEKL---G----SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSS  235 (433)
Q Consensus       165 ~~~~~~~~~~lV~e~~---~----~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~  235 (433)
                      ++.+++.-..+|+|.+   .    .+|.+++...   .++. .....+   -.-..||-+.+|+.+||+|.||++...
T Consensus        84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~---~~~~-~~~~~L---~~f~~~l~~~~Iv~~dl~~~NIv~~~~  154 (199)
T PF10707_consen   84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKEG---GLTE-ELRQAL---DEFKRYLLDHHIVIRDLNPHNIVVQRR  154 (199)
T ss_pred             EEEecCCceEEEEEEEECCCCCcCccHHHHHHcC---CccH-HHHHHH---HHHHHHHHHcCCeecCCCcccEEEEec
Confidence            9999999999999976   2    3688888654   3655 333333   334678889999999999999999654

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=98.30  E-value=4.4e-05  Score=67.54  Aligned_cols=119  Identities=19%  Similarity=0.276  Sum_probs=83.9

Q ss_pred             CcEEEEeeeecccc-EEEEEEEECCCCeEEEEEEeec------------ch----------hhHHHHHHHHHHHHHHHhc
Q 013973           97 SRYKIHSKMGEGTF-GQVLECWDRERKEMVAIKIVRG------------IK----------KYREAAMIEIEVLQQLAKH  153 (433)
Q Consensus        97 ~~~~~~~~iG~G~~-g~V~~~~~~~~~~~vAiK~~~~------------~~----------~~~~~~~~E~~~l~~l~~~  153 (433)
                      .+++.++.||.|.- |.||++..  +|+.||+|+++.            ..          .....+..|.....++...
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~  114 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA  114 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence            67999999999999 99999975  577999999421            00          1223466788888888776


Q ss_pred             CCCCCceEEecceeecC------------------CeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH
Q 013973          154 DKGGNRCVQIRNWFDYR------------------NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM  215 (433)
Q Consensus       154 ~~~~~~i~~~~~~~~~~------------------~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~L  215 (433)
                      ..++---+++++|+.-.                  ....||.||+...-          .+..    .-+.+|.+-|..+
T Consensus       115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~----------~~~~----~~~~~~~~dl~~~  180 (207)
T PF13095_consen  115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP----------PLQI----RDIPQMLRDLKIL  180 (207)
T ss_pred             cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc----------ccch----hHHHHHHHHHHHH
Confidence            54333248888887211                  13467888762221          1222    3356777888999


Q ss_pred             HHCCceeccCCCCceE
Q 013973          216 HDLCMIHTDLKPENVL  231 (433)
Q Consensus       216 H~~~ivHrDlKp~NIL  231 (433)
                      |..||+-+|+|+.|..
T Consensus       181 ~k~gI~~~Dv~~~ny~  196 (207)
T PF13095_consen  181 HKLGIVPRDVKPRNYR  196 (207)
T ss_pred             HHCCeeeccCcccccc
Confidence            9999999999999987

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.09  E-value=3.5e-05  Score=71.29  Aligned_cols=74  Identities=15%  Similarity=0.082  Sum_probs=49.7

Q ss_pred             eeecccc-EEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecC-C
Q 013973          104 KMGEGTF-GQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-G  181 (433)
Q Consensus       104 ~iG~G~~-g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~-~  181 (433)
                      .|-.|.+ +.||+....  +..+.+|+.....  ......|+++++.+..+ ..   +.+++.+....+..++|||++ |
T Consensus         5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~--~~~~~~E~~~l~~l~~~-~~---vP~v~~~~~~~~~~~lv~e~i~G   76 (244)
T cd05150           5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGP--TYELEREAERLRWLAGK-LP---VPEVIDYGSDDGRAWLLTSAVPG   76 (244)
T ss_pred             ecCCCCCcCeEEEEcCC--CCcEEEEecCCCc--ccchHHHHHHHHHHHhc-CC---CCeEEEEEecCCccEEEEEeeCC
Confidence            3445554 789998653  3568889876432  33466799999998765 22   455566666566788999999 6


Q ss_pred             CCHH
Q 013973          182 SSLY  185 (433)
Q Consensus       182 ~~L~  185 (433)
                      .+|.
T Consensus        77 ~~l~   80 (244)
T cd05150          77 VPAA   80 (244)
T ss_pred             ccHh
Confidence            5554

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=98.06  E-value=3.7e-05  Score=65.89  Aligned_cols=131  Identities=24%  Similarity=0.267  Sum_probs=86.5

Q ss_pred             EEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEe
Q 013973           99 YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  178 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e  178 (433)
                      .++.+.||+|.+|.||+|...  |..+|+|+-+ .+..+..+..|.++|..+.....    -.+++.+-.    ..++||
T Consensus        24 ~~v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr-~ds~r~~l~kEakiLeil~g~~~----~p~vy~yg~----~~i~me   92 (201)
T COG2112          24 LRVEKELAKGTTSVVYLGEWR--GGEVALKVRR-RDSPRRNLEKEAKILEILAGEGV----TPEVYFYGE----DFIRME   92 (201)
T ss_pred             hhhhhhhhcccccEEEEeecc--CceEEEEEec-CCcchhhHHHHHHHHHHhhhcCC----CceEEEech----hhhhhh
Confidence            456789999999999999764  5579999765 35566778889999988854332    223333322    235699


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC-CC-ceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          179 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLK-PE-NVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       179 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlK-p~-NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      |+ |-.|.+.-..     .+    ++-...++..---|-..||-|..|. |. ||++                       
T Consensus        93 ~i~G~~L~~~~~~-----~~----rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv-----------------------  140 (201)
T COG2112          93 YIDGRPLGKLEIG-----GD----RKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLV-----------------------  140 (201)
T ss_pred             hhcCcchhhhhhc-----cc----HHHHHHHHHHHHHHHHhccchhhhcCCceeEEe-----------------------
Confidence            99 6677665432     11    2223444555444667899998886 33 4554                       


Q ss_pred             cccCCCCCCEEEEecCCccccC
Q 013973          256 FKRMPKSSAIKVIDFGSTTYER  277 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~  277 (433)
                           .+..+.|+||..|++..
T Consensus       141 -----~~~~~~iIDFd~At~k~  157 (201)
T COG2112         141 -----NDRDVYIIDFDSATFKK  157 (201)
T ss_pred             -----cCCcEEEEEccchhhcc
Confidence                 23479999999887543

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=98.06  E-value=3.6e-05  Score=70.89  Aligned_cols=77  Identities=13%  Similarity=0.045  Sum_probs=45.2

Q ss_pred             EeeeeccccE-EEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhc-CCCCCceEEecceeecCCeEEEEEec
Q 013973          102 HSKMGEGTFG-QVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKH-DKGGNRCVQIRNWFDYRNHICIVFEK  179 (433)
Q Consensus       102 ~~~iG~G~~g-~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~-~~~~~~i~~~~~~~~~~~~~~lV~e~  179 (433)
                      ++.|+.|+.. .||+..     ..+++|+.+. .........|.+++..+... ....|.++..-..-+.....++||++
T Consensus         2 ~~~~~~gG~~n~vy~~~-----~~~VlR~~~~-~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~   75 (235)
T cd05155           2 IEPVDSGGTDNATFRLG-----DDMSVRLPSA-AGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRW   75 (235)
T ss_pred             ceeccCCCcccceEEcC-----CceEEEcCCc-cchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEe
Confidence            3567777766 489761     2478887654 22345678899999998753 22334333221111112345889999


Q ss_pred             C-CCCH
Q 013973          180 L-GSSL  184 (433)
Q Consensus       180 ~-~~~L  184 (433)
                      + |.++
T Consensus        76 i~G~~l   81 (235)
T cd05155          76 LEGETA   81 (235)
T ss_pred             ecCCCC
Confidence            8 5444

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.06  E-value=3.3e-05  Score=82.98  Aligned_cols=202  Identities=24%  Similarity=0.317  Sum_probs=123.7

Q ss_pred             HHHHHHHHHHHHHhcCCCCCceEEecceeecCC----eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Q 013973          139 AAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN----HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA  213 (433)
Q Consensus       139 ~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~----~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~  213 (433)
                      ....|...+..+.|     +|++..+.+--...    ...+..+++ ..++.+.++..+  ..+.+.++.+..++..||.
T Consensus       228 ~~E~e~~~l~k~~~-----~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~--~i~~~~~r~~~~~~~~GL~  300 (1351)
T KOG1035|consen  228 TTEIELESLSKIAH-----DNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVG--SIPLETLRILHQKLLEGLA  300 (1351)
T ss_pred             HHHHHHHHHHhhcc-----ccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhcc--ccCHHHHHHHHHHHhhhHH
Confidence            34456666666644     44554444432221    122334567 678888887765  7899999999999999999


Q ss_pred             HHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEE--ecCCccccCCCCCc--eeecCcc
Q 013973          214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI--DFGSTTYERPDQNY--IVSTRHY  289 (433)
Q Consensus       214 ~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~--Dfg~a~~~~~~~~~--~~gt~~y  289 (433)
                      |+|+...       .|+.+......-                 ...+....+.+.  ||+...........  ..-+..+
T Consensus       301 ~~h~~~l-------~~v~L~~s~~~~-----------------~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~  356 (1351)
T KOG1035|consen  301 YLHSLSL-------EHVVLSASSSKE-----------------STVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIR  356 (1351)
T ss_pred             HHHHhcc-------ceeEEecccccc-----------------cccCccceeecchhhhcccccCCCcccchhhcCcccc
Confidence            9999843       444443221000                 001334444444  66655543332211  2335567


Q ss_pred             cchhhhhCCCCCCc--chhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCC
Q 013973          290 RAPEVILGLGWTYP--CDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  367 (433)
Q Consensus       290 ~aPE~~~~~~~~~~--~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  367 (433)
                      .|+|......+.++  .|+|.+|.....+..|..+-.....      ....++                           
T Consensus       357 ~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~~~------~~~~l~---------------------------  403 (1351)
T KOG1035|consen  357 NADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKSAV------PVSLLD---------------------------  403 (1351)
T ss_pred             ccccccccccchhhhhhHHHHHHHHHhhhhhcCcccccccc------hhhhhc---------------------------
Confidence            88888776665544  6999999999999888653321100      000000                           


Q ss_pred             CccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          368 GAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                                               ........+++.+|+.-++++|+++.+++.|+|.+..
T Consensus       404 -------------------------~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~~  440 (1351)
T KOG1035|consen  404 -------------------------VLSTSELLDALPKCLDEDSEERLSALELLTHPFLRFP  440 (1351)
T ss_pred             -------------------------cccchhhhhhhhhhcchhhhhccchhhhhhchhcccc
Confidence                                     0111156778999999999999999999999998644

>PLN02876 acyl-CoA dehydrogenase

Probab=97.99  E-value=9.2e-05  Score=80.59  Aligned_cols=79  Identities=15%  Similarity=0.088  Sum_probs=51.5

Q ss_pred             EeeeeccccEEEEEEEECCCC--eEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC---CeEE
Q 013973          102 HSKMGEGTFGQVLECWDRERK--EMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR---NHIC  174 (433)
Q Consensus       102 ~~~iG~G~~g~V~~~~~~~~~--~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~---~~~~  174 (433)
                      ++.|+.|.+..+|+......+  ..+++|+.....  .......+|..+++.+..+. + ..+.+++.++.+.   +..|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~-~-vpVP~v~~~~~d~~v~G~~f  120 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHT-D-VPVPKVYCLCTDASVIGTAF  120 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcC-C-CCCCcEEEEecCCCcCCCce
Confidence            577899999999998765433  357777654221  22345778999999996421 1 1245555555443   5678


Q ss_pred             EEEecCCC
Q 013973          175 IVFEKLGS  182 (433)
Q Consensus       175 lV~e~~~~  182 (433)
                      +||||+.|
T Consensus       121 lVME~v~G  128 (822)
T PLN02876        121 YIMEYLEG  128 (822)
T ss_pred             EEEEecCC
Confidence            99999933

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=97.97  E-value=5.4e-05  Score=76.72  Aligned_cols=145  Identities=14%  Similarity=0.144  Sum_probs=87.7

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecch--------------------------------hhHHH------HHHHH
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--------------------------------KYREA------AMIEI  144 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--------------------------------~~~~~------~~~E~  144 (433)
                      +.||.-+.|.|++|+.+. |+.||||+-+..-                                ...+.      +..|.
T Consensus       167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA  245 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA  245 (538)
T ss_pred             chhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence            679999999999999886 8999999853110                                00111      22344


Q ss_pred             HHHHHHHhcCCCCC-----ceEEecceeecCCeEEEEEecC-CCCHH--HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 013973          145 EVLQQLAKHDKGGN-----RCVQIRNWFDYRNHICIVFEKL-GSSLY--DFLRKNNYRSFPIDLVREIARQLLECIAFMH  216 (433)
Q Consensus       145 ~~l~~l~~~~~~~~-----~i~~~~~~~~~~~~~~lV~e~~-~~~L~--~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH  216 (433)
                      +...++++...+-.     .|.+++.  .....-.|+|||| |..+.  +.|.+.+   ++...+...+.+...  +-|=
T Consensus       246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~--~~st~RVLtME~~~G~~i~Dl~~i~~~g---i~~~~i~~~l~~~~~--~qIf  318 (538)
T KOG1235|consen  246 KNAERFRENFKDFSLLTYVLVPKVYW--DLSTKRVLTMEYVDGIKINDLDAIDKRG---ISPHDILNKLVEAYL--EQIF  318 (538)
T ss_pred             HhHHHHHHHHHhcccccceeCCeehh--hcCcceEEEEEecCCccCCCHHHHHHcC---CCHHHHHHHHHHHHH--HHHH
Confidence            44444433221111     1333332  2345678999999 65544  4566654   665544433333322  2223


Q ss_pred             HCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCC
Q 013973          217 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP  278 (433)
Q Consensus       217 ~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~  278 (433)
                      ..|++|+|=+|.||++..++                       ..+..+.+.|||+......
T Consensus       319 ~~GffHaDPHPGNilv~~~~-----------------------~~~~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  319 KTGFFHADPHPGNILVRPNP-----------------------EGDEEIVLLDHGLYAVISH  357 (538)
T ss_pred             hcCCccCCCCCCcEEEecCC-----------------------CCCccEEEEcccccccccH
Confidence            47899999999999996432                       2466889999998765543

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.90  E-value=0.00033  Score=69.09  Aligned_cols=75  Identities=23%  Similarity=0.224  Sum_probs=52.6

Q ss_pred             EeeeeccccEEEEEEEECCCCeEEEEEEeec------c--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973          102 HSKMGEGTFGQVLECWDRERKEMVAIKIVRG------I--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus       102 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~------~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      .+.||.|.+..||++.+..+++.|+||.-..      .  ....+....|.+.|+.+.....  .++++++.+.  ....
T Consensus        31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p--~~VPkV~~~D--~~~~  106 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVP--DLVPKVYHYD--EELA  106 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCC--CCCCeEEEEC--CCCC
Confidence            4789999999999999876556799997431      1  1234556778888888765322  3466666653  3557


Q ss_pred             EEEEecC
Q 013973          174 CIVFEKL  180 (433)
Q Consensus       174 ~lV~e~~  180 (433)
                      ++|||++
T Consensus       107 ~lVME~L  113 (401)
T PRK09550        107 VTVMEDL  113 (401)
T ss_pred             EEEEecC
Confidence            8999998

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.72  E-value=0.00043  Score=63.55  Aligned_cols=75  Identities=15%  Similarity=0.309  Sum_probs=46.6

Q ss_pred             EeeeeccccEEEEEEEECC-CCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecC
Q 013973          102 HSKMGEGTFGQVLECWDRE-RKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  180 (433)
Q Consensus       102 ~~~iG~G~~g~V~~~~~~~-~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~  180 (433)
                      ++.|..|-...||++.... .++.|++|+........-....|..+++.+..... .|   +++..+..    .+||||+
T Consensus         3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl-~P---~v~~~~~~----~~l~e~i   74 (235)
T cd05157           3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGL-AP---KLYATFQN----GLIYEFI   74 (235)
T ss_pred             EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCC-CC---eEEEEeCC----cEEEEee
Confidence            4667788888999987543 34678899775322221223468888888876543 23   33333322    3799998


Q ss_pred             -CCCH
Q 013973          181 -GSSL  184 (433)
Q Consensus       181 -~~~L  184 (433)
                       |.++
T Consensus        75 ~G~~l   79 (235)
T cd05157          75 PGRTL   79 (235)
T ss_pred             CCCcC
Confidence             5443

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=97.68  E-value=0.00061  Score=65.12  Aligned_cols=137  Identities=21%  Similarity=0.253  Sum_probs=95.0

Q ss_pred             EEEeeeeccccEEEEEEEECCCCeEEEEEEeec---------------------------chhhHHHHHHHHHHHHHHHh
Q 013973          100 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---------------------------IKKYREAAMIEIEVLQQLAK  152 (433)
Q Consensus       100 ~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~---------------------------~~~~~~~~~~E~~~l~~l~~  152 (433)
                      .+...|..|--+.||.|.. .+|..+|||+++.                           .+...--+..|+.-|+++..
T Consensus       147 ~inGCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~  225 (520)
T KOG2270|consen  147 EINGCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNN  225 (520)
T ss_pred             ecccccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHh
Confidence            3556788999999999975 4566799998741                           11122334568888999877


Q ss_pred             cCCCCCceEEecceeecCCeEEEEEecCCCC--HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-HCCceeccCCCCc
Q 013973          153 HDKGGNRCVQIRNWFDYRNHICIVFEKLGSS--LYDFLRKNNYRSFPIDLVREIARQLLECIAFMH-DLCMIHTDLKPEN  229 (433)
Q Consensus       153 ~~~~~~~i~~~~~~~~~~~~~~lV~e~~~~~--L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH-~~~ivHrDlKp~N  229 (433)
                      .....|--+.+.       ...|||+|+|.+  -.-.|..-   .++...+..+-.|++.-+.-|- ..++||.||.-=|
T Consensus       226 aGIP~PePIlLk-------~hVLVM~FlGrdgw~aPkLKd~---~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN  295 (520)
T KOG2270|consen  226 AGIPCPEPILLK-------NHVLVMEFLGRDGWAAPKLKDA---SLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFN  295 (520)
T ss_pred             cCCCCCCceeee-------cceEeeeeccCCCCcCcccccc---cCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhh
Confidence            655444333332       336999999543  22223322   4777788888888888887775 4569999999999


Q ss_pred             eEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccc
Q 013973          230 VLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY  275 (433)
Q Consensus       230 ILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~  275 (433)
                      +|+.                            ++.+.|+|.+.+..
T Consensus       296 ~Lyh----------------------------dG~lyiIDVSQSVE  313 (520)
T KOG2270|consen  296 LLYH----------------------------DGKLYIIDVSQSVE  313 (520)
T ss_pred             heEE----------------------------CCEEEEEEcccccc
Confidence            9983                            46788898887654

>PRK05231 homoserine kinase; Provisional

Probab=97.62  E-value=0.0017  Score=62.66  Aligned_cols=77  Identities=13%  Similarity=0.056  Sum_probs=47.8

Q ss_pred             EeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEec-c--eeecCCeEEEEEe
Q 013973          102 HSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR-N--WFDYRNHICIVFE  178 (433)
Q Consensus       102 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~-~--~~~~~~~~~lV~e  178 (433)
                      ++.|+.|....+|+.... +| .+++|++.  ....+....|..+++.+.......|.++.-. +  +....+..+++|+
T Consensus        27 ~~~l~~G~~n~~y~v~t~-~g-~~vLK~~~--~~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~  102 (319)
T PRK05231         27 LKGIAEGIENSNFFLTTT-QG-EYVLTLFE--RLTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVT  102 (319)
T ss_pred             cchhccccccceEEEEeC-CC-cEEEEEec--cCChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEE
Confidence            456777888899998653 33 58999875  2223445567788888876544444433211 1  1123566789999


Q ss_pred             cC-CC
Q 013973          179 KL-GS  182 (433)
Q Consensus       179 ~~-~~  182 (433)
                      ++ |.
T Consensus       103 ~l~G~  107 (319)
T PRK05231        103 FLEGK  107 (319)
T ss_pred             ecCCC
Confidence            98 44

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=97.58  E-value=0.0018  Score=62.11  Aligned_cols=78  Identities=12%  Similarity=-0.027  Sum_probs=48.1

Q ss_pred             EEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecc---eeecCCeEEEE
Q 013973          100 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN---WFDYRNHICIV  176 (433)
Q Consensus       100 ~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~---~~~~~~~~~lV  176 (433)
                      ..++.++.|....+|++... ++ .+++|+..... .......|.+++..|.......|.++.-..   .....+..++|
T Consensus        25 ~~i~~~~~G~~n~~y~v~t~-~~-~~vLK~~~~~~-~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l  101 (307)
T TIGR00938        25 LSLKGIAEGVENSNYLLTTD-VG-RYILTLYEKRV-KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACL  101 (307)
T ss_pred             eeccccCCccccceEEEEeC-CC-cEEEEEecCCC-CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEE
Confidence            44677788888899988643 33 48889875421 133455678888888665433333333211   11234678899


Q ss_pred             EecC
Q 013973          177 FEKL  180 (433)
Q Consensus       177 ~e~~  180 (433)
                      |+++
T Consensus       102 ~e~i  105 (307)
T TIGR00938       102 VEFL  105 (307)
T ss_pred             EEeC
Confidence            9998

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=97.56  E-value=0.00073  Score=64.63  Aligned_cols=75  Identities=16%  Similarity=0.159  Sum_probs=46.8

Q ss_pred             EeeeeccccEEEEEEEECC------CCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973          102 HSKMGEGTFGQVLECWDRE------RKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus       102 ~~~iG~G~~g~V~~~~~~~------~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      ++.|..|-...||++....      .++.|++|+.............|..++..+..... .|   +++..+..    .+
T Consensus         3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~-~P---~~~~~~~~----~~   74 (302)
T cd05156           3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNL-GP---KLYGIFPN----GR   74 (302)
T ss_pred             EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCC-CC---ceEEEeCC----Cc
Confidence            3556667777889887543      25779999976433333445678889998876542 23   34444432    25


Q ss_pred             EEecC-CCCH
Q 013973          176 VFEKL-GSSL  184 (433)
Q Consensus       176 V~e~~-~~~L  184 (433)
                      |+||+ |..+
T Consensus        75 v~e~i~G~~l   84 (302)
T cd05156          75 IEEFIPSRTL   84 (302)
T ss_pred             hhheeCCCcC
Confidence            78887 5443

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.55  E-value=0.0013  Score=62.58  Aligned_cols=78  Identities=13%  Similarity=0.069  Sum_probs=49.5

Q ss_pred             EeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEec-c--eeecCCeEEEEEe
Q 013973          102 HSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR-N--WFDYRNHICIVFE  178 (433)
Q Consensus       102 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~-~--~~~~~~~~~lV~e  178 (433)
                      ++.|..|....+|+....  +..+++|+...  ........|+.++..+..+....|.++... +  +....+..++||+
T Consensus        19 i~~i~~G~~n~~y~v~~~--~~~~vLr~~~~--~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~   94 (296)
T cd05153          19 FEGISAGIENTNYFVTTD--SGRYVLTLFEK--VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVE   94 (296)
T ss_pred             eecccCccccceEEEEeC--CCcEEEEEcCC--CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEE
Confidence            567888888899998643  33589998764  234556778999998876543323322211 1  1133456789999


Q ss_pred             cC-CCC
Q 013973          179 KL-GSS  183 (433)
Q Consensus       179 ~~-~~~  183 (433)
                      ++ |..
T Consensus        95 ~i~G~~  100 (296)
T cd05153          95 FLAGEH  100 (296)
T ss_pred             eCCCCC
Confidence            99 544

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.52  E-value=0.00058  Score=63.69  Aligned_cols=69  Identities=13%  Similarity=0.037  Sum_probs=42.2

Q ss_pred             eeccccEEEEEEEECCCCeEEEEEEeecchhhH-HHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecC-CC
Q 013973          105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR-EAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GS  182 (433)
Q Consensus       105 iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~-~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~-~~  182 (433)
                      +..|-.+.+|+..  .+++.+++|+........ -....|..+++.+..... .|.++.   ...    -++||||+ |.
T Consensus         4 ~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~-~P~~i~---~~~----~~~v~e~i~G~   73 (256)
T TIGR02721         4 LSGGLTNRSWRIE--HPGISFVWRPQSPVCKALGVDRQREYQILQALSALGL-APKPIL---VNE----HWLLVEWLEGE   73 (256)
T ss_pred             CCCcCcCCeEEEE--eCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCC-CCceEE---EeC----CEEEEEeccCc
Confidence            4567777899886  345678889764322111 134678999999876542 344433   222    26899998 54


Q ss_pred             C
Q 013973          183 S  183 (433)
Q Consensus       183 ~  183 (433)
                      .
T Consensus        74 ~   74 (256)
T TIGR02721        74 V   74 (256)
T ss_pred             c
Confidence            4

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=97.36  E-value=0.0021  Score=62.21  Aligned_cols=83  Identities=19%  Similarity=0.185  Sum_probs=52.6

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEee----c----chhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVR----G----IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~----~----~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      +.||-|....||++.+..+++.|+||.-.    .    -....++...|.+.|+......+  ..+++++.+.  .....
T Consensus         1 ~EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P--~~vP~vy~~D--~e~~~   76 (370)
T TIGR01767         1 QEVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVP--HLVPRIFHFD--TEMAV   76 (370)
T ss_pred             CcCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCc--cccCeEEEEc--cccce
Confidence            35899999999999986554689999742    1    12223445678888877654322  2455555433  34556


Q ss_pred             EEEecC--CCCHHHHHH
Q 013973          175 IVFEKL--GSSLYDFLR  189 (433)
Q Consensus       175 lV~e~~--~~~L~~~l~  189 (433)
                      +|||++  ...|.+.|.
T Consensus        77 ~vMEdL~~~~ilR~~Li   93 (370)
T TIGR01767        77 TVMEDLSHHKIARKGLI   93 (370)
T ss_pred             ehHhhCccchHHHHHHH
Confidence            999998  334555553

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PRK12396 5-methylribose kinase; Reviewed

Probab=97.18  E-value=0.0026  Score=62.31  Aligned_cols=83  Identities=23%  Similarity=0.281  Sum_probs=54.3

Q ss_pred             EeeeeccccEEEEEEEECCCCeEEEEEEee----cc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973          102 HSKMGEGTFGQVLECWDRERKEMVAIKIVR----GI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus       102 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~----~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ++.||-|.-.-||++.+..+++.|+||.-.    ..   .-..++...|.+.|+......+  .++++++.+.  .....
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P--~~VP~vy~~D--~e~~~  109 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAP--GLVPKVYLFD--SVMNC  109 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCC--CcCCeEEEEC--cHHhh
Confidence            688999999999999985445679999642    11   2234556778888887765432  3456665543  34556


Q ss_pred             EEEecC--CCCHHHHH
Q 013973          175 IVFEKL--GSSLYDFL  188 (433)
Q Consensus       175 lV~e~~--~~~L~~~l  188 (433)
                      +|||++  ...|.+.|
T Consensus       110 ~vMEdL~~~~ilR~~L  125 (409)
T PRK12396        110 CVMEDLSDHTILRTAL  125 (409)
T ss_pred             HHHHhCcccHHHHHHH
Confidence            889988  23344444

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=97.14  E-value=0.0003  Score=77.72  Aligned_cols=127  Identities=14%  Similarity=0.073  Sum_probs=94.1

Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCC-----ceeccCCCCceEeeccCccccC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNNYR--SFPIDLVREIARQLLECIAFMHDLC-----MIHTDLKPENVLLVSSEYIKVP  241 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~-----ivHrDlKp~NILl~~~~~~~i~  241 (433)
                      ....+.+++++ +|.+++.|-+.-.+  .+....+.....+.+.+..-+|+..     .||++||+-|.+|         
T Consensus      1303 s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmI--------- 1373 (2724)
T KOG1826|consen 1303 STEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMI--------- 1373 (2724)
T ss_pred             ChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccce---------
Confidence            34678999999 99999988754322  2333334344444477777777532     7999999999999         


Q ss_pred             CCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCc---eeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh
Q 013973          242 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT  318 (433)
Q Consensus       242 dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~---~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt  318 (433)
                                        ..+.++|+.++|+.+...+....   .++++.|++|++...-.++.++|+|..|+.+|++--
T Consensus      1374 ------------------Vtny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~ 1435 (2724)
T KOG1826|consen 1374 ------------------VTNYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSD 1435 (2724)
T ss_pred             ------------------ecCCcccccccccccccCchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhc
Confidence                              45566777788877744444322   467889999999998889999999999999999988


Q ss_pred             CCCCC
Q 013973          319 GEALF  323 (433)
Q Consensus       319 g~~Pf  323 (433)
                      |..+|
T Consensus      1436 ~n~~f 1440 (2724)
T KOG1826|consen 1436 GNAYF 1440 (2724)
T ss_pred             ccHHH
Confidence            87766

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=97.12  E-value=0.0029  Score=63.05  Aligned_cols=90  Identities=24%  Similarity=0.258  Sum_probs=63.5

Q ss_pred             CcchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccc
Q 013973          302 YPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL  381 (433)
Q Consensus       302 ~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  381 (433)
                      +++||||+|.++.++..|...+......+++..+.+.. ..+.+......+.                            
T Consensus       110 pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~-~~d~~~~~~a~e~----------------------------  160 (725)
T KOG1093|consen  110 PKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYY-TDDQELLSTAMEH----------------------------  160 (725)
T ss_pred             cchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhc-cCchhHHHHHHHH----------------------------
Confidence            49999999999999999998888777777666655543 2222222211111                            


Q ss_pred             hhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          382 PRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                              ...-.++..+..+..+|+...|..||...++..|+-|++
T Consensus       161 --------~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~~i~~e  199 (725)
T KOG1093|consen  161 --------LIQLLADKKRLPLLKKCLWLEPIIRPLPMELSKRCSFTE  199 (725)
T ss_pred             --------HHHHhhhHhHHHHhccCCccccccccchhHHhcCccHHH
Confidence                    001123456788999999999999999999999988753

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=97.08  E-value=0.00099  Score=62.73  Aligned_cols=130  Identities=20%  Similarity=0.253  Sum_probs=84.8

Q ss_pred             EEEEeeeeccccEEEEEEEECCCCeEEEEEEee-------cchh----------------hHHHHHHHHHHHHHHHhcCC
Q 013973           99 YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR-------GIKK----------------YREAAMIEIEVLQQLAKHDK  155 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~-------~~~~----------------~~~~~~~E~~~l~~l~~~~~  155 (433)
                      +.+.+.||-|--+-||.+.+. .|...++|+-+       ..+.                .+-.+..|...|+.+..+.-
T Consensus        94 ~svGnqIGVGKESDIY~v~d~-~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf  172 (465)
T KOG2268|consen   94 ESVGNQIGVGKESDIYVVADE-EGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF  172 (465)
T ss_pred             hhhccccccccccceEEEecC-CCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence            568899999999999999875 45678888642       0000                12234568888888877543


Q ss_pred             CCCceEEecceeecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeec
Q 013973          156 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVS  234 (433)
Q Consensus       156 ~~~~i~~~~~~~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~  234 (433)
                      ..|   +-+    +.+..|+|||++ |-.|...-+-     .   .+..+...+..-+--|-..|+||+|..-=||++++
T Consensus       173 pVP---kpi----D~~RH~Vvmelv~g~Pl~~v~~v-----~---d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~d  237 (465)
T KOG2268|consen  173 PVP---KPI----DHNRHCVVMELVDGYPLRQVRHV-----E---DPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKD  237 (465)
T ss_pred             CCC---Ccc----cccceeeHHHhhcccceeeeeec-----C---ChHHHHHHHHHHHHHHHHcCceecccchheeEEec
Confidence            322   222    235568999998 6666543221     1   12234444555566788899999999999999976


Q ss_pred             cCccccCCCc
Q 013973          235 SEYIKVPDYK  244 (433)
Q Consensus       235 ~~~~~i~dfg  244 (433)
                      ++.+.+.||.
T Consensus       238 d~~i~vIDFP  247 (465)
T KOG2268|consen  238 DDKIVVIDFP  247 (465)
T ss_pred             CCCEEEeech
Confidence            6555555553

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=97.03  E-value=0.0021  Score=56.92  Aligned_cols=92  Identities=25%  Similarity=0.242  Sum_probs=64.9

Q ss_pred             HHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecCC-CCHHHH---HHhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013973          142 IEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG-SSLYDF---LRKNNYRSFPIDLVREIARQLLECIAFMHD  217 (433)
Q Consensus       142 ~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~~-~~L~~~---l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~  217 (433)
                      .|.-+++.+...    +++++++|++..    ++|.||.+ +++...   +.+.  ..-+|..+.+|+.+++..+++|+.
T Consensus         8 ~E~lll~~l~~~----~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~--~~~~w~~R~~iA~~lL~~l~~l~~   77 (188)
T PF12260_consen    8 NEPLLLQLLQGS----EPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQF--LQSPWEQRAKIALQLLELLEELDH   77 (188)
T ss_pred             cHHHHHHHcCCC----CCCCCeeeECCC----EEEEEeecCccccccccccccc--cccCHHHHHHHHHHHHHHHHHHhc
Confidence            366677766432    368999998843    46889984 444321   1111  146899999999999999999997


Q ss_pred             ---CCceeccCCCCceEeeccCccccCCC
Q 013973          218 ---LCMIHTDLKPENVLLVSSEYIKVPDY  243 (433)
Q Consensus       218 ---~~ivHrDlKp~NILl~~~~~~~i~df  243 (433)
                         ..+.-.|++++|+-++++|.+|+.|.
T Consensus        78 ~~~~~~~lcDv~~~nfgv~~~~~lk~iDl  106 (188)
T PF12260_consen   78 GPLGFFYLCDVSPDNFGVNDDGRLKLIDL  106 (188)
T ss_pred             CCCCcEEEeecchHHeEEeCCCcEEEEec
Confidence               34888999999999966554444443

Proteins in this uncharacterised family are described as transmembrane proteins.

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=96.79  E-value=0.016  Score=56.27  Aligned_cols=76  Identities=12%  Similarity=0.252  Sum_probs=43.8

Q ss_pred             EEEEeeeeccccEEEEEEEECCC---CeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           99 YKIHSKMGEGTFGQVLECWDRER---KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~---~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      .++ +.|..|-...+|++.....   +..|++|+........-....|..+++.+...... |   ++++++. .+   +
T Consensus        17 i~i-~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~gl~-P---~~l~~~~-~G---~   87 (330)
T PLN02421         17 FSV-ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAGFG-A---KLLGVFG-NG---M   87 (330)
T ss_pred             eEE-EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhcCCC-C---ceeEEeC-Cc---E
Confidence            444 4444477778898865432   23688998753322222235688899988776532 3   3344443 22   5


Q ss_pred             EEecC-CCC
Q 013973          176 VFEKL-GSS  183 (433)
Q Consensus       176 V~e~~-~~~  183 (433)
                      |.+|+ |..
T Consensus        88 i~~fi~g~~   96 (330)
T PLN02421         88 IQSFINART   96 (330)
T ss_pred             eehhhcCCC
Confidence            78887 443

>PRK11768 serine/threonine protein kinase; Provisional

Probab=96.78  E-value=0.061  Score=52.04  Aligned_cols=72  Identities=14%  Similarity=0.068  Sum_probs=43.4

Q ss_pred             ccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecc--eeecCCeEEEEEecCC
Q 013973          109 TFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN--WFDYRNHICIVFEKLG  181 (433)
Q Consensus       109 ~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~--~~~~~~~~~lV~e~~~  181 (433)
                      .-..||+.... ++..+++|+.+...........|.+.+..+.......+..+..-+  ....++..+.|+++++
T Consensus        37 ~eN~vy~v~~~-~~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~~  110 (325)
T PRK11768         37 YENRVYQFGDE-DGRRVVAKFYRPERWSDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRRG  110 (325)
T ss_pred             ccceEEEEecC-CCCEEEEEEcCcccCCHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeeeC
Confidence            33568988653 455699998864333456667889999888765432111111112  1233567788999883

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=96.72  E-value=0.014  Score=55.76  Aligned_cols=75  Identities=12%  Similarity=0.005  Sum_probs=40.7

Q ss_pred             EEEeeeeccccEEEEEEEECCCCeEEEEEEeec---chhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC--eEE
Q 013973          100 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN--HIC  174 (433)
Q Consensus       100 ~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~--~~~  174 (433)
                      .+++.+..|..-.+|.....  ++.+++. ...   .........+|..+++.+......   +...++.+..+.  ..+
T Consensus        28 ~~v~~~~~G~sn~t~~~~~~--~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP---~p~~~~~~~~~~~g~pf  101 (321)
T COG3173          28 LIVEEISGGWSNDTFRLGDT--GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVP---VPRAFGLCGEGYLGTPF  101 (321)
T ss_pred             ceeeeccCCcccceEEEecC--CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCC---CcccccccccCCCCCce
Confidence            45555544444445555443  6667777 321   112233345677777777543222   344455554443  779


Q ss_pred             EEEecC
Q 013973          175 IVFEKL  180 (433)
Q Consensus       175 lV~e~~  180 (433)
                      .||+++
T Consensus       102 ~v~~~v  107 (321)
T COG3173         102 YVMEWV  107 (321)
T ss_pred             EEEEEe
Confidence            999998

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=96.71  E-value=0.071  Score=51.03  Aligned_cols=64  Identities=11%  Similarity=0.171  Sum_probs=38.1

Q ss_pred             EEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecc---eeecCCeEEEEEecC
Q 013973          112 QVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN---WFDYRNHICIVFEKL  180 (433)
Q Consensus       112 ~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~---~~~~~~~~~lV~e~~  180 (433)
                      .||++... .| .+++|++...   ......|..++..+.......|.++....   +...++..++|++++
T Consensus        11 ~v~~v~t~-~g-~~~LK~~~~~---~~~~~~~~~~~~~L~~~g~~vp~~i~t~~g~~~~~~~~~~~~l~~~i   77 (313)
T TIGR02906        11 NVYKVETD-SG-NKCLKKINYP---PERLLFILGAQEHLRKNGFNIPKILKTKDGELYVKYNGDLYVLTEWI   77 (313)
T ss_pred             cEEEEEeC-CC-CeEEEEcCCC---HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEehhc
Confidence            48887643 33 5899987532   23355577888888665433333333211   112356789999998

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PLN02236 choline kinase

Probab=96.69  E-value=0.016  Score=56.47  Aligned_cols=75  Identities=16%  Similarity=0.076  Sum_probs=44.6

Q ss_pred             EeeeeccccEEEEEEEECC----CCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEE
Q 013973          102 HSKMGEGTFGQVLECWDRE----RKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  177 (433)
Q Consensus       102 ~~~iG~G~~g~V~~~~~~~----~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~  177 (433)
                      +..|-.|-...+|++....    +++.|++|+........-....|..+++.+..... .|.+   ++.+...    .|.
T Consensus        41 i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~gl-~P~~---~~~~~~g----~v~  112 (344)
T PLN02236         41 VIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHGQ-GPRL---LGRFPNG----RVE  112 (344)
T ss_pred             EEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcCC-CCce---EEEECCc----eEE
Confidence            3455557788899986432    24678999875432222223568999998877654 3333   3444332    578


Q ss_pred             ecC-CCCH
Q 013973          178 EKL-GSSL  184 (433)
Q Consensus       178 e~~-~~~L  184 (433)
                      +|+ +.+|
T Consensus       113 efi~g~~l  120 (344)
T PLN02236        113 EFIHARTL  120 (344)
T ss_pred             EeeCCCCC
Confidence            887 4443

>PRK10593 hypothetical protein; Provisional

Probab=96.66  E-value=0.019  Score=54.75  Aligned_cols=108  Identities=15%  Similarity=0.123  Sum_probs=72.7

Q ss_pred             EEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee---cCCeEEE
Q 013973           99 YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD---YRNHICI  175 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~---~~~~~~l  175 (433)
                      ..-.+.||.|..+.||+....+ + .+.+|..+. ......+..|.+.|+.+.....  ..+.++++.+.   ..+..+|
T Consensus        16 ~~~~~~i~~G~~~~vy~~~~~~-~-~~~~k~~~~-~~~~~~~~~Ea~~L~~L~~~~~--vpVP~V~~~~~~~~~~g~~~L   90 (297)
T PRK10593         16 LSRVECISEQPYAALWALYDSQ-G-NPMPLMARS-FSTPGVAQQEAWKLSMLARSGT--VRMPTVYGVMTHEQSPGPDVL   90 (297)
T ss_pred             hheeeecCCccceeEEEEEcCC-C-CEEEEEecc-cccchHHHHHHHHHHHHccCCC--CCcCcEEEEeccCCcCCCeEE
Confidence            3446789999999999986433 3 377787542 2234578889999999976421  22455555443   3467899


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL  218 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~  218 (433)
                      |||++ |.++.+.       ..+......+..+++.+|.-||+.
T Consensus        91 VmE~i~G~~~~~~-------~~~~~~~~~l~~~l~~~La~LH~~  127 (297)
T PRK10593         91 LLERLRGVSVEAP-------ARTPERWEQLKDQIVEGLLAWHRI  127 (297)
T ss_pred             EEeccCCEecCCC-------CCCHHHHHHHHHHHHHHHHHHhCC
Confidence            99999 6666541       123444566778888999999974

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=96.65  E-value=0.024  Score=53.47  Aligned_cols=46  Identities=28%  Similarity=0.177  Sum_probs=29.5

Q ss_pred             eccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhc
Q 013973          106 GEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKH  153 (433)
Q Consensus       106 G~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~  153 (433)
                      ++|-...|+.+.+ .+|..+++|.-+. ........+|..++..+..+
T Consensus        20 ~~g~~~~v~~i~~-~~g~~~VlR~p~~-~~~~~~l~rE~~vL~~L~~~   65 (276)
T cd05152          20 ESGLDFQVVFAKD-TDGVPWVLRIPRR-PDVSERAAAEKRVLALVRKH   65 (276)
T ss_pred             CCcceeEEEEEEc-CCCCeEEEEecCC-HHHHHHHHHHHHHHHHHHhc
Confidence            4454455665532 3466788887653 23345578899999999764

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PLN02756 S-methyl-5-thioribose kinase

Probab=96.41  E-value=0.049  Score=53.85  Aligned_cols=75  Identities=15%  Similarity=0.098  Sum_probs=49.0

Q ss_pred             EEeeeeccccEEEEEEEECCCCeEEEEEEee-----cch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973          101 IHSKMGEGTFGQVLECWDRERKEMVAIKIVR-----GIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus       101 ~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~-----~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ..+.||-|....||+..+.  +..|+||.-.     ...   ....+...|...|+.+....  ...+++++.+.+  +.
T Consensus        36 ~~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~--p~~VPkVy~~de--d~  109 (418)
T PLN02756         36 KIKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLC--PDHVPEVYHFDR--TM  109 (418)
T ss_pred             eEEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcC--CCCCCeEEEECC--CC
Confidence            4688999999999998863  3458899753     111   12344455677777665432  134677777665  44


Q ss_pred             EEEEEecCC
Q 013973          173 ICIVFEKLG  181 (433)
Q Consensus       173 ~~lV~e~~~  181 (433)
                      .++|||++.
T Consensus       110 ~vlvME~L~  118 (418)
T PLN02756        110 ALIGMRYLE  118 (418)
T ss_pred             CEEEEeecC
Confidence            678899993

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=96.06  E-value=0.075  Score=51.28  Aligned_cols=78  Identities=18%  Similarity=0.161  Sum_probs=48.0

Q ss_pred             eeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCc-eEEeccee--ecCC--eEEEEEe
Q 013973          104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR-CVQIRNWF--DYRN--HICIVFE  178 (433)
Q Consensus       104 ~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~-i~~~~~~~--~~~~--~~~lV~e  178 (433)
                      .|.+ .-..||+....+.+  +++|+.+.. ....+...|.+.++.+..+....+- +..+-+-.  .-.+  +.+-|++
T Consensus        33 ~l~s-~eN~~f~~~~~~g~--~iLki~~~~-~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~  108 (331)
T COG2334          33 GLNS-EENSNFRVQTEDGR--YILKIYRPG-WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFE  108 (331)
T ss_pred             cccc-ccCceEEEEecCCC--eEEEEecCC-CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEE
Confidence            3444 44578988764433  599999866 5667778899999999876532211 22222211  1234  7788899


Q ss_pred             cC-CCCHH
Q 013973          179 KL-GSSLY  185 (433)
Q Consensus       179 ~~-~~~L~  185 (433)
                      |+ |..+.
T Consensus       109 ~l~G~~~~  116 (331)
T COG2334         109 YLPGRPLE  116 (331)
T ss_pred             ecCCcCcC
Confidence            99 54444

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=95.99  E-value=0.02  Score=54.21  Aligned_cols=76  Identities=17%  Similarity=0.186  Sum_probs=49.8

Q ss_pred             EEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEe
Q 013973           99 YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE  178 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e  178 (433)
                      .+-.+.|+-|....+|+..  .+++.+-+|+-.  ......+..|.+-|+.|...  ..-.+++.+.+....+..+||||
T Consensus        19 i~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~--~~~~~~f~~Ea~gL~~L~~~--~~~~vP~vi~~G~~~~~~fLlle   92 (288)
T PF03881_consen   19 ITSIEPVSGGDINEAYRLD--TDGGSYFVKVNS--ESGRDMFEGEAEGLKALAEA--NPIRVPKVIAWGEYDDDAFLLLE   92 (288)
T ss_dssp             --EEEEE--SSSSEEEEEE--TTS-EEEEEEEE--GGGCCHHHHHHHHHHHHCHT--TTSBS--EEEEEE-SSCCEEEEE
T ss_pred             eeeeEecCCCChhheEEEE--CCCccEEEEecC--hhhHHHHHHHHHHHHHHHhc--CCCCCCeEEEEEeecCCceEEEE
Confidence            3455778889999999886  567789999865  34445678899999999553  22456777777776677799999


Q ss_pred             cC
Q 013973          179 KL  180 (433)
Q Consensus       179 ~~  180 (433)
                      |+
T Consensus        93 ~l   94 (288)
T PF03881_consen   93 FL   94 (288)
T ss_dssp             --
T ss_pred             ee
Confidence            98

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=95.95  E-value=0.025  Score=50.98  Aligned_cols=51  Identities=20%  Similarity=0.069  Sum_probs=30.0

Q ss_pred             CeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecC
Q 013973          122 KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  180 (433)
Q Consensus       122 ~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~  180 (433)
                      ++.|++|+........-....|..+++.+.....    -..+++.+...    +|++|+
T Consensus         2 ~~~~~~Ri~g~~t~~~idr~~E~~~~~~l~~~g~----~p~~~~~~~~g----~v~e~i   52 (211)
T PF01633_consen    2 PEKYLVRIPGEGTENFIDRENENEALKLLSEAGL----GPKIIYFFENG----RVEEFI   52 (211)
T ss_dssp             TSEEEEEEEESCGCSHHHHHHHHHHHHHHHHTTS----SS-EEEEETTE----EEEE--
T ss_pred             CCEEEEEeCCCCcccccCHHHHHHHHHHHHHcCC----CCeEEEEcCCC----cEEEEe
Confidence            3568899887554444555678899988877553    23344444332    566777

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=95.66  E-value=0.046  Score=53.38  Aligned_cols=61  Identities=28%  Similarity=0.371  Sum_probs=43.5

Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH-HHCCceeccCCCCceEeecc
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM-HDLCMIHTDLKPENVLLVSS  235 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~L-H~~~ivHrDlKp~NILl~~~  235 (433)
                      ...||-+|. |-++..++...   ..+++....++.--+.||--+ --.+.+|.|+.|.||++.-.
T Consensus       319 ~~vl~E~~~~Gl~v~~~v~~~---~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~  381 (565)
T KOG1236|consen  319 DLVLVETYERGLSVLRFVKWK---SQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFN  381 (565)
T ss_pred             cceeeeeccccccHHhhhhcc---cChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEec
Confidence            345666687 88999888765   356666666666666665443 35679999999999999643

>PRK06148 hypothetical protein; Provisional

Probab=95.56  E-value=0.17  Score=56.45  Aligned_cols=81  Identities=16%  Similarity=0.115  Sum_probs=46.1

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhc--CCCCCceEEec-ce----eec-CC--e
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKH--DKGGNRCVQIR-NW----FDY-RN--H  172 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~--~~~~~~i~~~~-~~----~~~-~~--~  172 (433)
                      +.|+ |..-.+|+... .++..|++|+.+.. ........|..++..|...  ....|.++... +-    ... .+  +
T Consensus        31 ~~L~-s~~d~nf~v~~-~~g~~yVLKi~~~~-~~~~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~  107 (1013)
T PRK06148         31 TPLD-GERDLNFRLTT-DDGADYILKIVNPS-EPRVESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPR  107 (1013)
T ss_pred             eecC-CcCCceEEEEe-CCCCeEEEEEcCCc-cchhHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceE
Confidence            4564 34577888764 35667999999753 2333445567788877664  22234443322 11    111 22  5


Q ss_pred             EEEEEecC-CCCHHH
Q 013973          173 ICIVFEKL-GSSLYD  186 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~  186 (433)
                      ++-+|+|+ |..+.+
T Consensus       108 ~vrLl~~l~G~~l~~  122 (1013)
T PRK06148        108 LLRLLSWLPGTPLAE  122 (1013)
T ss_pred             EEEEEeccCCCcHHh
Confidence            67789999 655543

>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=95.32  E-value=0.04  Score=52.16  Aligned_cols=123  Identities=20%  Similarity=0.264  Sum_probs=85.2

Q ss_pred             EEeeeeccccEEEEEEEE-------CC---CCeEEEEEEeecc-------h--------------------hhHHHHHHH
Q 013973          101 IHSKMGEGTFGQVLECWD-------RE---RKEMVAIKIVRGI-------K--------------------KYREAAMIE  143 (433)
Q Consensus       101 ~~~~iG~G~~g~V~~~~~-------~~---~~~~vAiK~~~~~-------~--------------------~~~~~~~~E  143 (433)
                      |...|..|.-+.|+.|+-       ..   .-..+|||+++..       .                    ....-...|
T Consensus       256 i~GiIsTGKEsvvlHAY~GS~E~~~qd~ql~ptecAIKvfKTTLnEFKnRd~YiKDDfRFKDRFSK~NpR~i~~mWAEkE  335 (531)
T KOG2269|consen  256 IDGIISTGKESVVLHAYAGSNEHGHQDPQLSPTECAIKVFKTTLNEFKNRDEYIKDDFRFKDRFSKQNPRGILKMWAEKE  335 (531)
T ss_pred             hhhhhhcCcceEEEEeccCcccccccCcccCchHHHHHHHHHHHHHHhhhhhhhccchhhhhhhcccCcHHHHHHHHHHH
Confidence            556888999999988843       11   1245899987411       0                    011123457


Q ss_pred             HHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecCCCC--HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-HCCc
Q 013973          144 IEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSS--LYDFLRKNNYRSFPIDLVREIARQLLECIAFMH-DLCM  220 (433)
Q Consensus       144 ~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~~~~--L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH-~~~i  220 (433)
                      +.-|.++..+..+.|.+|.+..       ..|||.|+|..  -.--|..   ..|+.++.+....|+...+.-|- +.-+
T Consensus       336 mhNL~RMq~~GlpcP~vV~lkk-------hvLVMsFiGd~~~aAPkLK~---v~l~d~E~~~aY~q~~~~M~~lY~Ec~L  405 (531)
T KOG2269|consen  336 MHNLSRMQKHGLPCPQVVKLKK-------HVLVMSFIGDQGLAAPKLKN---VELTDDERRNAYDQVQSIMCRLYKECLL  405 (531)
T ss_pred             HHHHHHHHhcCCCCCceeeeec-------ceEEEEeecCCCCCCccccc---cccChHHHHHHHHHHHHHHHHHHHhhhe
Confidence            7778888888878888887754       35999999532  2222332   25888888888999998888774 5669


Q ss_pred             eeccCCCCceEee
Q 013973          221 IHTDLKPENVLLV  233 (433)
Q Consensus       221 vHrDlKp~NILl~  233 (433)
                      ||-||.--|+|..
T Consensus       406 VHADlSEyN~Lw~  418 (531)
T KOG2269|consen  406 VHADLSEYNLLWT  418 (531)
T ss_pred             eecchhhhhheec
Confidence            9999999999984

>PTZ00384 choline kinase; Provisional

Probab=95.24  E-value=0.35  Score=47.79  Aligned_cols=76  Identities=17%  Similarity=0.160  Sum_probs=42.4

Q ss_pred             EEeeeeccccEEEEEEEECCCC-e-----EEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973          101 IHSKMGEGTFGQVLECWDRERK-E-----MVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus       101 ~~~~iG~G~~g~V~~~~~~~~~-~-----~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      .++.|..|-...+|++...... .     .|.+++........-....|..+++.+..+..    -.++++.+..    +
T Consensus        54 ~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~~gl----gP~l~~~f~~----g  125 (383)
T PTZ00384         54 EIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGDNNF----GPKIIGRFGD----F  125 (383)
T ss_pred             EEEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHhCCC----CCeEEEecCC----E
Confidence            3456656888899998754331 1     24444432111111123458888888876553    2344555543    4


Q ss_pred             EEEecC-CCCH
Q 013973          175 IVFEKL-GSSL  184 (433)
Q Consensus       175 lV~e~~-~~~L  184 (433)
                      +|.||+ |..|
T Consensus       126 ~l~efIeGr~l  136 (383)
T PTZ00384        126 TIQEWVEGNTM  136 (383)
T ss_pred             EEEEEeccccC
Confidence            888998 5443

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=94.96  E-value=0.49  Score=45.34  Aligned_cols=66  Identities=14%  Similarity=0.218  Sum_probs=37.3

Q ss_pred             cccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEec----c--eeecCCeEEEEEecC
Q 013973          108 GTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR----N--WFDYRNHICIVFEKL  180 (433)
Q Consensus       108 G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~----~--~~~~~~~~~lV~e~~  180 (433)
                      |.-+.||++.. ..| .+++|.+...   .+.......++..+....-  +.++.++    +  +...++..+++|+++
T Consensus        17 ~~~~~v~~v~T-~~G-~~~Lk~~~~~---~~~l~~~~~~~~~L~~~G~--~~~~~~~~t~~G~~~~~~~~~~~~L~~wi   88 (309)
T TIGR02904        17 QVTGKLFKVYT-DQG-VFALKKLYAD---RNTIESFVSQIQVLSEKGF--SRIVPVYPTKDGSYYLFHGHFLYYLMPWL   88 (309)
T ss_pred             cccCcEEEEEe-CCC-CEEEEEeccc---hHhHHHHHHHHHHHHHcCC--CcCCceeecCCCCeeeEECCEEEEEeCCc
Confidence            33568999865 344 5899988633   2233345566666655432  2223331    2  123356678999988

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=94.72  E-value=0.12  Score=49.96  Aligned_cols=104  Identities=14%  Similarity=0.271  Sum_probs=65.6

Q ss_pred             ecCCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCceEeeccCccccCCCcCC
Q 013973          168 DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL-CMIHTDLKPENVLLVSSEYIKVPDYKSS  246 (433)
Q Consensus       168 ~~~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlKp~NILl~~~~~~~i~dfg~~  246 (433)
                      +...+.|++|++-|++|.-.      ....++++..++.+.+.-+.-+... ..=|||+...||||              
T Consensus       296 de~~y~yl~~kdhgt~is~i------k~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLI--------------  355 (488)
T COG5072         296 DETLYLYLHFKDHGTPISII------KADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILI--------------  355 (488)
T ss_pred             CCceEEEEEEecCCceeeee------ecccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceee--------------
Confidence            44567889999988876432      1345777888888777766655543 48999999999999              


Q ss_pred             CCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHH
Q 013973          247 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWS  308 (433)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS  308 (433)
                                   + ++++.|+||-+++...++..  +.-...--|-.+.|.. +.+-+||-
T Consensus       356 -------------d-~GnvtLIDfklsRl~~~q~~--isy~rldhp~lF~G~d-d~QFeIYr  400 (488)
T COG5072         356 -------------D-EGNVTLIDFKLSRLSYSQGI--ISYNRLDHPDLFNGVD-DYQFEIYR  400 (488)
T ss_pred             -------------e-cCceEEEEeeeeecccCCce--eeccccCchhhhcCcc-ceeeeHHH
Confidence                         4 56788888887774333221  1111123344444332 45556665

>PRK06149 hypothetical protein; Provisional

Probab=94.48  E-value=0.23  Score=55.35  Aligned_cols=76  Identities=11%  Similarity=0.050  Sum_probs=42.7

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhc--CCCCCceEEec-ce----e--ecCCeE
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKH--DKGGNRCVQIR-NW----F--DYRNHI  173 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~--~~~~~~i~~~~-~~----~--~~~~~~  173 (433)
                      ..|+.+ .-.+|+.....  ..|++|+.+... .......|..++..|...  ....|.++.-. +-    .  .....+
T Consensus        37 ~~L~s~-~d~nf~v~t~~--~~yVLKi~~~~~-~~~~l~~e~~~l~hL~~~~~glpvp~pi~t~~G~~~~~~~~~g~~~~  112 (972)
T PRK06149         37 TELGSQ-QDRNFRVDSDG--GRFVLKICHAAY-AAVELEAQHAALRHLAEREPALRVPVVIPALDGEELLTLDVRGQGLR  112 (972)
T ss_pred             EecCCc-CcceEEEEecC--CcEEEEeCCccC-ChHHHHHHHHHHHHHHhhCCCCCCceeeECCCCCeEEEEecCCceEE
Confidence            455433 34678776532  458999987432 234566788888888765  22333333211 11    1  122456


Q ss_pred             EEEEecC-CC
Q 013973          174 CIVFEKL-GS  182 (433)
Q Consensus       174 ~lV~e~~-~~  182 (433)
                      +-+++|+ |.
T Consensus       113 vrL~~~l~G~  122 (972)
T PRK06149        113 VRLLDYLPGQ  122 (972)
T ss_pred             EEEEEecCCc
Confidence            7788998 53

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	433
3nr9_A	368	Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length		2e-90
2wu6_A	381	Crystal Structure Of The Human Clk3 In Complex With		1e-83
2exe_A	357	Crystal Structure Of The Phosphorylated Clk3 Length		1e-83
2eu9_A	355	Crystal Structure Of Clk3 Length = 355		2e-83
1z57_A	339	Crystal Structure Of Human Clk1 In Complex With 10z		1e-81
2vag_A	339	Crystal Structure Of Di-Phosphorylated Human Clk1 I		2e-80
3llt_A	360	Crystal Structure Of Pf14_0431, Kinase Domain Lengt		6e-66
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		1e-49
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		1e-49
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		5e-49
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		1e-48
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		2e-48
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		2e-48
1wbp_A	397	Srpk1 Bound To 9mer Docking Motif Peptide Length =		7e-44
3beg_A	381	Crystal Structure Of Sr Protein Kinase 1 Complexed		8e-44
2x7g_A	389	Structure Of Human Serine-Arginine-Rich Protein-Spe		1e-42
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		3e-37
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		3e-37
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		4e-27
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		5e-27
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		6e-27
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		1e-26
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-26
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		2e-26
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-26
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		3e-26
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		4e-26
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		4e-26
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		4e-26
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		4e-26
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		4e-26
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		4e-26
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		5e-26
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		5e-26
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		5e-26
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		5e-26
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		5e-26
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		5e-26
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		5e-26
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		5e-26
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		5e-26
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		5e-26
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		6e-26
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		6e-26
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		6e-26
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		6e-26
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		6e-26
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		6e-26
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		6e-26
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		7e-26
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		9e-26
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		1e-25
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-25
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		2e-25
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		2e-25
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		2e-25
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		2e-25
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		3e-24
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		3e-24
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		4e-24
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		5e-24
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		6e-24
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		6e-24
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		8e-24
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		9e-24
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		2e-23
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		4e-23
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		4e-23
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		6e-23
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		8e-23
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		9e-23
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		9e-23
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		9e-23
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		9e-23
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		1e-22
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		1e-22
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		1e-22
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		1e-22
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		1e-22
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		1e-22
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		1e-22
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		1e-22
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		1e-22
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		1e-22
2oza_B	366	Structure Of P38alpha Complex Length = 366		1e-22
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		1e-22
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		1e-22
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		1e-22
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		1e-22
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		1e-22
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		2e-22
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		2e-22
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		2e-22
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		2e-22
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		2e-22
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		2e-22
3hec_A	348	P38 In Complex With Imatinib Length = 348		2e-22
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		2e-22
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		2e-22
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		2e-22
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		2e-22
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		2e-22
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		2e-22
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		2e-22
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		2e-22
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		2e-22
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		2e-22
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		2e-22
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		2e-22
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		2e-22
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		2e-22
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		2e-22
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		2e-22
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		2e-22
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		2e-22
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		2e-22
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		2e-22
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		2e-22
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		2e-22
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		2e-22
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		2e-22
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-22
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		4e-22
4exu_A	371	Mapk13, Inactive Form Length = 371		4e-22
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		5e-22
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		6e-22
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		6e-22
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		9e-22
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		1e-21
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		1e-21
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		1e-21
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		1e-21
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		1e-21
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		1e-21
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		2e-21
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		2e-21
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-21
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		2e-21
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-21
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		3e-21
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-21
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		5e-21
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		6e-21
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		7e-21
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		8e-21
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		9e-21
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		1e-20
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		1e-20
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		1e-20
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		1e-20
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		1e-20
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		1e-20
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		2e-20
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		2e-20
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		2e-20
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-20
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		2e-20
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-20
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		2e-20
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		2e-20
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		2e-20
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		2e-20
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		2e-20
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		2e-20
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		2e-20
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		2e-20
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		2e-20
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		2e-20
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		2e-20
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		2e-20
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		2e-20
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		2e-20
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		2e-20
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		2e-20
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		3e-20
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		3e-20
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		3e-20
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		3e-20
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		4e-20
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		5e-20
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		5e-20
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		5e-20
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		7e-20
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		7e-20
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		9e-20
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		1e-19
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		1e-19
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		1e-19
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		2e-19
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		2e-19
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		3e-19
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		5e-19
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		8e-19
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		9e-19
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		1e-18
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		1e-18
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		1e-18
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		3e-18
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		3e-18
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		3e-18
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		4e-18
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		4e-18
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		5e-18
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		6e-18
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		2e-17
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		4e-17
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		5e-17
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		6e-17
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		6e-17
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		7e-17
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		7e-17
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		8e-17
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		9e-17
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		1e-16
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		1e-16
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		1e-16
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		1e-16
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		1e-16
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		1e-16
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		2e-16
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		2e-16
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		2e-16
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		2e-16
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		2e-16
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-16
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-16
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		2e-16
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		3e-16
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		4e-16
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		4e-16
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		4e-16
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		4e-16
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		4e-16
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		4e-16
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		4e-16
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		5e-16
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		7e-16
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		7e-16
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		8e-16
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		8e-16
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		8e-16
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		8e-16
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		8e-16
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		8e-16
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		8e-16
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		8e-16
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		9e-16
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		9e-16
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		9e-16
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		9e-16
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		9e-16
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		9e-16
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		9e-16
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		9e-16
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		1e-15
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		1e-15
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		1e-15
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		1e-15
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		2e-15
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		2e-15
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		2e-15
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		3e-15
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		4e-15
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		5e-15
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		7e-15
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		1e-14
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		1e-14
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		1e-14
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		2e-14
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		2e-14
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		2e-14
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		2e-14
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		2e-14
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		2e-14
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		2e-14
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		2e-14
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		2e-14
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		2e-14
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		2e-14
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		2e-14
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		3e-14
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		4e-14
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		5e-14
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		5e-14
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		7e-14
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		8e-14
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		9e-14
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		2e-13
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		2e-13
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		2e-13
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		2e-13
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		2e-13
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		2e-13
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		2e-13
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		2e-13
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		2e-13
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		2e-13
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		3e-13
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		3e-13
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		3e-13
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		3e-13
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		3e-13
2oza_A	356	Structure Of P38alpha Complex Length = 356		3e-13
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		3e-13
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		3e-13
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		3e-13
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		3e-13
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		4e-13
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		4e-13
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		4e-13
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		4e-13
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		4e-13
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		4e-13
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		4e-13
4fie_A	423	Full-Length Human Pak4 Length = 423		5e-13
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		5e-13
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		5e-13
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		5e-13
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		6e-13
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		6e-13
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		6e-13
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		6e-13
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		6e-13
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		7e-13
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		8e-13
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		9e-13
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		9e-13
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		9e-13
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		1e-12
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		1e-12
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		1e-12
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		1e-12
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		2e-12
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		2e-12
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		2e-12
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		2e-12
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		2e-12
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		2e-12
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		2e-12
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		3e-12
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		3e-12
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		3e-12
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		3e-12
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		3e-12
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		3e-12
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		3e-12
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		3e-12
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		4e-12
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		4e-12
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		4e-12
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		4e-12
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		6e-12
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		7e-12
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		7e-12
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		7e-12
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		1e-11
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		1e-11
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		1e-11
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		2e-11
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		2e-11
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		2e-11
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		2e-11
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		2e-11
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		2e-11
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		2e-11
3g51_A	325	Structural Diversity Of The Active Conformation Of		2e-11
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		2e-11
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		3e-11
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		3e-11
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		3e-11
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		3e-11
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		3e-11
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		3e-11
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		3e-11
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		3e-11
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		4e-11
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		5e-11
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		5e-11
3a7f_A	303	Human Mst3 Kinase Length = 303		5e-11
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		5e-11
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		5e-11
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		6e-11
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		7e-11
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		7e-11
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		8e-11
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		8e-11
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		8e-11
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		8e-11
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		8e-11
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		9e-11
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		1e-10
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		1e-10
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		1e-10
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		1e-10
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		1e-10
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		1e-10
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		2e-10
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		2e-10
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		2e-10
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		3e-10
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		3e-10
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		3e-10
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		3e-10
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		3e-10
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		3e-10
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		3e-10
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		3e-10
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		3e-10
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		3e-10
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		3e-10
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		3e-10
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		3e-10
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		4e-10
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		4e-10
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		4e-10
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		4e-10
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		4e-10
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		4e-10
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		4e-10
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		4e-10
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		4e-10
4ae6_A	343	Structure And Function Of The Human Sperm-specific		5e-10
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		5e-10
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		5e-10
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		5e-10
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		5e-10
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		5e-10
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		5e-10
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		5e-10
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		5e-10
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		5e-10
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		5e-10
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		5e-10
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		5e-10
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		5e-10
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		5e-10
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		6e-10
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		6e-10
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		7e-10
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		7e-10
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		7e-10
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		7e-10
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		7e-10
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		8e-10
3soa_A	444	Full-Length Human Camkii Length = 444		8e-10
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		8e-10
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		8e-10
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		8e-10
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		8e-10
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		8e-10
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		8e-10
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		8e-10
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		8e-10
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		8e-10
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		8e-10
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		9e-10
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		9e-10
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		9e-10
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		9e-10
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		9e-10
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		9e-10
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		1e-09
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		1e-09
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		1e-09
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		1e-09
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		1e-09
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		1e-09
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		1e-09
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		1e-09
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		1e-09
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-09
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		1e-09
3kga_A	299	Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe		1e-09
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		1e-09
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-09
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		1e-09
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		1e-09
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		1e-09
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		1e-09
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		1e-09
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		1e-09
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		1e-09
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		1e-09
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		1e-09
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		1e-09
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		1e-09
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		1e-09
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		1e-09
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		1e-09
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		1e-09
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		1e-09
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		1e-09
4ae9_A	343	Structure And Function Of The Human Sperm-specific		1e-09
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		1e-09
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		1e-09
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-09
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		2e-09
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		2e-09
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		2e-09
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		2e-09
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		2e-09
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		2e-09
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		2e-09
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		2e-09
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		2e-09
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		2e-09
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		2e-09
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		2e-09
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		2e-09
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		2e-09
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		2e-09
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		2e-09
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		2e-09
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		2e-09
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		2e-09
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		2e-09
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		2e-09
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		2e-09
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		2e-09
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		2e-09
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		2e-09
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		2e-09
2pl0_A	289	Lck Bound To Imatinib Length = 289		2e-09
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		2e-09
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		2e-09
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		2e-09
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		2e-09
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		3e-09
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		3e-09
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		3e-09
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		3e-09
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		3e-09
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		3e-09
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		3e-09
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		3e-09
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		3e-09
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		3e-09
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		3e-09
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		3e-09
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		3e-09
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		3e-09
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		3e-09
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		4e-09
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		4e-09
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		4e-09
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		4e-09
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		4e-09
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		4e-09
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		4e-09
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		4e-09
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		4e-09
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		4e-09
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		4e-09
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		4e-09
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		4e-09
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		4e-09
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		4e-09
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		4e-09
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		4e-09
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		5e-09
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		5e-09
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		5e-09
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		5e-09
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		5e-09
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		5e-09
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		5e-09
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		6e-09
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		6e-09
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		6e-09
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		6e-09
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		6e-09
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		7e-09
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		7e-09
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		7e-09
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		8e-09
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		8e-09
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		8e-09
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		9e-09
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		9e-09
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		1e-08
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		1e-08
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		1e-08
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		1e-08
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		1e-08
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		1e-08
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-08
4f99_A	361	Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti		1e-08
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-08
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		2e-08
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		2e-08
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		2e-08
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		2e-08
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		2e-08
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		2e-08
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		2e-08
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		3e-08
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		3e-08
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		3e-08
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		3e-08
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		3e-08
3kk9_A	282	Camkii Substrate Complex B Length = 282		3e-08
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		3e-08
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		3e-08
3kk8_A	284	Camkii Substrate Complex A Length = 284		3e-08
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		3e-08
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		3e-08
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-08
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		3e-08
3sv0_A	483	Crystal Structure Of Casein Kinase-1 Like Protein I		4e-08
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		4e-08
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		4e-08
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		4e-08
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		4e-08
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		4e-08
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		4e-08
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		4e-08
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		5e-08
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		5e-08
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		5e-08
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		5e-08
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		5e-08
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		5e-08
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		5e-08
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		5e-08
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		6e-08
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		6e-08
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		6e-08
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		6e-08
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		6e-08
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		6e-08
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		6e-08
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		6e-08
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		6e-08
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		6e-08
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		6e-08
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		6e-08
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		6e-08
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		6e-08
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		8e-08
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		8e-08
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		1e-07
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		1e-07
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		1e-07
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		1e-07
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		1e-07
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		1e-07
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		1e-07
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		1e-07
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		1e-07
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		1e-07
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		1e-07
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		2e-07
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		2e-07
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		2e-07
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		2e-07
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		2e-07
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		2e-07
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		2e-07
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		2e-07
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		2e-07
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		2e-07
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		2e-07
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		2e-07
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		2e-07
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		2e-07
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		2e-07
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		2e-07
1ckj_A	317	Casein Kinase I Delta Truncation Mutant Containing		2e-07
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		2e-07
3uys_A	296	Crystal Structure Of Apo Human Ck1d Length = 296		2e-07
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		2e-07
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		3e-07
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		3e-07
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		3e-07
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		3e-07
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		3e-07
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		3e-07
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		3e-07
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		3e-07
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		3e-07
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		3e-07
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		3e-07
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		4e-07
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		4e-07
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		4e-07
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		4e-07
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		4e-07
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		4e-07
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		4e-07
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		4e-07
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		4e-07
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		5e-07
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		5e-07
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		5e-07
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		5e-07
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		5e-07
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		6e-07
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		6e-07
3lj0_A	434	Ire1 Complexed With Adp And Quercetin Length = 434		6e-07
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		6e-07
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		7e-07
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		7e-07
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		7e-07
3a4o_X	286	Lyn Kinase Domain Length = 286		7e-07
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		8e-07
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		9e-07
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		9e-07
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		9e-07
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		1e-06
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		1e-06
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		1e-06
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		1e-06
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		1e-06
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		2e-06
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		2e-06
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		2e-06
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-06
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		2e-06
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		2e-06
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-06
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		2e-06
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		2e-06
2csn_A	297	Binary Complex Of Casein Kinase-1 With Cki7 Length		2e-06
2cmw_A	310	Structure Of Human Casein Kinase 1 Gamma-1 In Compl		2e-06
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		3e-06
1eh4_A	298	Binary Complex Of Casein Kinase-1 From S. Pombe Wit		3e-06
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		3e-06
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		3e-06
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		3e-06
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		3e-06
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		3e-06
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		3e-06
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		3e-06
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-06
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		4e-06
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		4e-06
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		4e-06
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		4e-06
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		4e-06
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		4e-06
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		4e-06
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		4e-06
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		4e-06
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		4e-06
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		4e-06
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		4e-06
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		4e-06
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		5e-06
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		5e-06
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		5e-06
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		5e-06
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		5e-06
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		5e-06
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		5e-06
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		5e-06
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		5e-06
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		5e-06
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		5e-06
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		6e-06
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		6e-06
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		6e-06
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		6e-06
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		6e-06
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		6e-06
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		6e-06
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		6e-06
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		6e-06
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		7e-06
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		7e-06
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		7e-06
2c47_A	313	Structure Of Casein Kinase 1 Gamma 2 Length = 313		7e-06
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		7e-06
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		7e-06
4hni_A	296	Crystal Structure Of Ck1e In Complex With Pf4800567		7e-06
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		8e-06
4hgl_A	330	Crystal Structure Of Ck1g3 With Compound 1 Length =		8e-06
2izr_A	330	Structure Of Casein Kinase Gamma 3 In Complex With		8e-06
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		8e-06
2chl_A	351	Structure Of Casein Kinase 1 Gamma 3 Length = 351		8e-06
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		8e-06
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		9e-06
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		9e-06
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		9e-06
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		9e-06
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		9e-06
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		9e-06
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		1e-05
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		1e-05
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		1e-05
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		1e-05
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		1e-05
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-05
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		1e-05
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		1e-05
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		1e-05
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		1e-05
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		1e-05
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		1e-05
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-05
4h58_A	275	Braf In Complex With Compound 3 Length = 275		2e-05
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		2e-05
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-05
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		2e-05
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		2e-05
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		3e-05
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		3e-05
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		3e-05
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		3e-05
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		3e-05
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		3e-05
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		3e-05
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		3e-05
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		4e-05
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		4e-05
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		4e-05
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		4e-05
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		4e-05
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		5e-05
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		5e-05
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		5e-05
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		5e-05
2pzi_A	681	Crystal Structure Of Protein Kinase Pkng From Mycob		6e-05
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		6e-05
4fl2_A	636	Structural And Biophysical Characterization Of The		6e-05
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		6e-05
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		6e-05
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		6e-05
4fl3_A	635	Structural And Biophysical Characterization Of The		6e-05
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		6e-05
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		6e-05
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		6e-05
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		6e-05
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		6e-05
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		7e-05
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		7e-05
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		7e-05
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		8e-05
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		8e-05
4alu_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		8e-05
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		8e-05
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		8e-05
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		9e-05
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		9e-05
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		9e-05
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		9e-05
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		9e-05
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		9e-05
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		1e-04
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		1e-04
2h34_A	309	Apoenzyme Crystal Structure Of The Tuberculosis Ser		1e-04
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		1e-04
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		1e-04
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		1e-04
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		1e-04
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		1e-04
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		1e-04
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		1e-04
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		1e-04
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		1e-04
3bi6_A	287	Wee1 Kinase Complex With Inhibitor Pd352396 Length		1e-04
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		1e-04
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		1e-04
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		1e-04
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-04
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		1e-04
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		1e-04
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		1e-04
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		1e-04
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		1e-04
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		1e-04
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		1e-04
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		1e-04
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		1e-04
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		2e-04
2z2w_A	285	Humand Wee1 Kinase Complexed With Inhibitor Pf03357		2e-04
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		2e-04
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		2e-04
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		2e-04
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		2e-04
1x8b_A	289	Structure Of Human Wee1a Kinase: Kinase Domain Comp		2e-04
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		2e-04
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		2e-04
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		2e-04
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		2e-04
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		2e-04
2in6_A	287	Wee1 Kinase Complex With Inhibitor Pd311839 Length		2e-04
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		2e-04
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		3e-04
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		3e-04
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-04
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		3e-04
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		3e-04
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		3e-04
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		3e-04
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		3e-04
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		4e-04
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		4e-04
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		5e-04
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		5e-04
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		5e-04
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		5e-04
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		6e-04
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		6e-04
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		7e-04
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		7e-04

>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368

Iteration: 1
 Score =  329 bits (844), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 166/351 (47%), Positives = 236/351 (67%), Gaps = 15/351 (4%)
Query: 80  EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKKYRE 138
           EDD +GH ++ +G+ L  RY+I S +GEGTFG+V++C D  R    VA+KI++ ++KY+E
Sbjct: 16  EDDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKE 75
Query: 139 AAMIEIEVLQQLAKHD-KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFP 197
           AA +EI VL+++ + D    N CVQ+ +WFDY  H+CI FE LG S +DFL+ NNY  +P
Sbjct: 76  AARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYP 135
Query: 198 IDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK 257
           I  VR +A QL + + F+HD  + HTDLKPEN+L V+S+Y    +   +L   +D    +
Sbjct: 136 IHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDY----ELTYNLEKKRD----E 187
Query: 258 RMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 317
           R  KS+A++V+DFGS T++    + IVSTRHYRAPEVIL LGW+ PCD+WS+GCI+ E  
Sbjct: 188 RSVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYY 247
Query: 318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS 377
            G  LFQTH+N EHLAMMER+LGP+P  M+++  +  +KY  RGRLDW E  ++   ++ 
Sbjct: 248 VGFTLFQTHDNREHLAMMERILGPIPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVRE 305
Query: 378 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
             K P  + L  +  +H    L  L++ +L Y+P  RLT  EAL+HPFF R
Sbjct: 306 NCK-PLRRYLTSEAEEHHQ--LFDLIESMLEYEPAKRLTLGEALQHPFFAR 353

>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381

Iteration: 1
 Score =  306 bits (785), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 156/350 (44%), Positives = 225/350 (64%), Gaps = 15/350 (4%)
Query: 80  EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGIKKYRE 138
           EDDK+GH +  +G+ L  RY+I   +GEGTFG+V+EC D  R K  VA+KI+R + KYRE
Sbjct: 34  EDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYRE 93
Query: 139 AAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFP 197
           AA +EI VL+++ + DK     CV + +WF++  H+CI FE LG + ++FL++NN++ +P
Sbjct: 94  AARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYP 153
Query: 198 IDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK 257
           +  VR +A QL   + F+H+  + HTDLKPEN+L V+SE+        +L+    S   K
Sbjct: 154 LPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEF-------ETLYNEHKSCEEK 206
Query: 258 RMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 317
            + K+++I+V DFGS T++      IV+TRHYR PEVIL LGW  PCD+WS+GCIL E  
Sbjct: 207 SV-KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYY 265
Query: 318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS 377
            G  LFQTHEN EHL MME++LGP+P HM+ R  +  +KY  +G L W E ++    +K 
Sbjct: 266 RGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRK--QKYFYKGGLVWDENSSDGRYVKE 323
Query: 378 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
             K P    ++   ++H    L  L++ +L +DP  R+T  EAL HPFF 
Sbjct: 324 NCK-PLKSYMLQDSLEHV--QLFDLMRRMLEFDPAQRITLAEALLHPFFA 370

>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357

Iteration: 1
 Score =  306 bits (785), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 156/350 (44%), Positives = 225/350 (64%), Gaps = 15/350 (4%)
Query: 80  EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGIKKYRE 138
           EDDK+GH +  +G+ L  RY+I   +GEGTFG+V+EC D  R K  VA+KI+R + KYRE
Sbjct: 11  EDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYRE 70
Query: 139 AAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFP 197
           AA +EI VL+++ + DK     CV + +WF++  H+CI FE LG + ++FL++NN++ +P
Sbjct: 71  AARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYP 130
Query: 198 IDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK 257
           +  VR +A QL   + F+H+  + HTDLKPEN+L V+SE+        +L+    S   K
Sbjct: 131 LPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEF-------ETLYNEHKSCEEK 183
Query: 258 RMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 317
            + K+++I+V DFGS T++      IV+TRHYR PEVIL LGW  PCD+WS+GCIL E  
Sbjct: 184 SV-KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYY 242
Query: 318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS 377
            G  LFQTHEN EHL MME++LGP+P HM+ R  +  +KY  +G L W E ++    +K 
Sbjct: 243 RGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRK--QKYFYKGGLVWDENSSDGRYVKE 300
Query: 378 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
             K P    ++   ++H    L  L++ +L +DP  R+T  EAL HPFF 
Sbjct: 301 NCK-PLKSYMLQDSLEHV--QLFDLMRRMLEFDPAQRITLAEALLHPFFA 347

>pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355

Iteration: 1
 Score =  306 bits (784), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 156/350 (44%), Positives = 225/350 (64%), Gaps = 15/350 (4%)
Query: 80  EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGIKKYRE 138
           EDDK+GH +  +G+ L  RY+I   +GEGTFG+V+EC D  R K  VA+KI+R + KYRE
Sbjct: 2   EDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYRE 61
Query: 139 AAMIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFP 197
           AA +EI VL+++ + DK     CV + +WF++  H+CI FE LG + ++FL++NN++ +P
Sbjct: 62  AARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYP 121
Query: 198 IDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK 257
           +  VR +A QL   + F+H+  + HTDLKPEN+L V+SE+        +L+    S   K
Sbjct: 122 LPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEF-------ETLYNEHKSCEEK 174
Query: 258 RMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 317
            + K+++I+V DFGS T++      IV+TRHYR PEVIL LGW  PCD+WS+GCIL E  
Sbjct: 175 SV-KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYY 233
Query: 318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS 377
            G  LFQTHEN EHL MME++LGP+P HM+ R  +  +KY  +G L W E ++    +K 
Sbjct: 234 RGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRK--QKYFYKGGLVWDENSSDGRYVKE 291
Query: 378 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
             K P    ++   ++H    L  L++ +L +DP  R+T  EAL HPFF 
Sbjct: 292 NCK-PLKSYMLQDSLEHV--QLFDLMRRMLEFDPAQRITLAEALLHPFFA 338

>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339

Iteration: 1
 Score =  300 bits (767), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 155/343 (45%), Positives = 222/343 (64%), Gaps = 15/343 (4%)
Query: 86  HYMFALGENLTSRYKIHSKMGEGTFGQVLECWD-RERKEMVAIKIVRGIKKYREAAMIEI 144
           H +   G+ L++RY+I   +GEG FG+V+EC D +     VA+KIV+ + +Y EAA  EI
Sbjct: 3   HLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEI 62
Query: 145 EVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVRE 203
           +VL+ L   D     RCVQ+  WF++  HICIVFE LG S YDF+++N +  F +D +R+
Sbjct: 63  QVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRK 122
Query: 204 IARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSS 263
           +A Q+ + + F+H   + HTDLKPEN+L V S+Y +  + K      +D    +R   + 
Sbjct: 123 MAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPK----IKRD----ERTLINP 174
Query: 264 AIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 323
            IKV+DFGS TY+    + +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL+E   G  +F
Sbjct: 175 DIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
            TH++ EHLAMMER+LGPLP+HM+++  +   KY    RLDW E +++   +    K P 
Sbjct: 235 PTHDSKEHLAMMERILGPLPKHMIQKTRK--RKYFHHDRLDWDEHSSAGRYVSRACK-PL 291
Query: 384 LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
            + ++ Q V+H    L  L+Q +L YDP  R+T REAL+HPFF
Sbjct: 292 KEFMLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPFF 332

>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339

Iteration: 1
 Score =  295 bits (756), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 153/343 (44%), Positives = 220/343 (64%), Gaps = 15/343 (4%)
Query: 86  HYMFALGENLTSRYKIHSKMGEGTFGQVLECWD-RERKEMVAIKIVRGIKKYREAAMIEI 144
           H +   G+ L++RY+I   +GEG FG+V+EC D +     VA+KIV+ + +Y EAA  EI
Sbjct: 3   HLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEI 62
Query: 145 EVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVRE 203
           +VL+ L   D     RCVQ+  WF++  HICIVFE LG S YDF+++N +  F +D +R+
Sbjct: 63  QVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRK 122
Query: 204 IARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSS 263
           +A Q+ + + F+H   + HTDLKPEN+L V S+Y +  + K      +D    +R   + 
Sbjct: 123 MAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPK----IKRD----ERTLINP 174
Query: 264 AIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 323
            IKV+DFGS TY+    + +V  RHYRAPEVIL LGW+ PCD+WS+GCIL+E   G  +F
Sbjct: 175 DIKVVDFGSATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
            TH++ EHLAMMER+LGPLP+HM+++  +   KY    RLDW E +++   +    K P 
Sbjct: 235 PTHDSKEHLAMMERILGPLPKHMIQKTRK--RKYFHHDRLDWDEHSSAGRYVSRACK-PL 291
Query: 384 LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
            + ++ Q V+H    L  L+Q +L YDP  R+T REAL+HPFF
Sbjct: 292 KEFMLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPFF 332

>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360

Iteration: 1
 Score =  248 bits (632), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 138/356 (38%), Positives = 211/356 (59%), Gaps = 19/356 (5%)
Query: 78  WREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR 137
           ++ DD+  H+ +  G  L + + +  KMG+GTFG+VL C   + K+  A+K+VR IKKY 
Sbjct: 16  FQGDDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYT 75
Query: 138 EAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFP 197
            +A IE ++L+++   D   N  V+    F Y +H+C++FE LG SLY+ + +NNY  F 
Sbjct: 76  RSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFH 135
Query: 198 IDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK 257
           I+ ++    ++L+ + ++  + + HTDLKPEN+LL        P ++ SL T +  +  K
Sbjct: 136 IEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDD------PYFEKSLITVRRVTDGK 189
Query: 258 RM----PKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 313
           ++     KS+ IK+IDFG  T++      I++TR YRAPEVIL LGW    D+WS GC+L
Sbjct: 190 KIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVL 249
Query: 314 VELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDR-HAEKYVRRG--RLDWPEGAA 370
            EL TG  LF+THE++EHLAMME ++ P+P++ML    + +  KYV +   +L WPE A+
Sbjct: 250 AELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENAS 309
Query: 371 SRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
           S  SIK V K   L  +I   +          L  +L+ DPT R +  E L+H F 
Sbjct: 310 SINSIKHVKKCLPLYKIIKHEL------FCDFLYSILQIDPTLRPSPAELLKHKFL 359

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score =  194 bits (492), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/360 (33%), Positives = 188/360 (52%), Gaps = 53/360 (14%)
Query: 92  GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLA 151
           GE    RY+I S +G+G+FGQV++ +DR  +E VAIKI++  K +   A IE+ +L+ + 
Sbjct: 49  GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 108
Query: 152 KHD-KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
           KHD +     V ++  F +RNH+C+VFE L  +LYD LR  N+R   ++L R+ A+Q+  
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168
Query: 211 CIAFMH--DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
            + F+   +L +IH DLKPEN+LL +                         PK SAIK++
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCN-------------------------PKRSAIKIV 203
Query: 269 DFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 328
           DFGS+          + +R YR+PEV+LG+ +    D+WS+GCILVE+ TGE LF     
Sbjct: 204 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
Query: 329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS---VMKLP--- 382
           ++ +  +  VLG  P H+L +  + A K+  +     P+G  + +  K      K P   
Sbjct: 264 VDQMNKIVEVLGIPPAHILDQAPK-ARKFFEK----LPDGTWNLKKTKDGKREYKPPGTR 318
Query: 383 RLQNLI-----------MQHVDHSAGD---LTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           +L N++                H+  D      L+  +L YDP  R+    AL+H FF +
Sbjct: 319 KLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 378

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score =  194 bits (492), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/360 (33%), Positives = 188/360 (52%), Gaps = 53/360 (14%)
Query: 92  GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLA 151
           GE    RY+I S +G+G+FGQV++ +DR  +E VAIKI++  K +   A IE+ +L+ + 
Sbjct: 30  GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 89
Query: 152 KHD-KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
           KHD +     V ++  F +RNH+C+VFE L  +LYD LR  N+R   ++L R+ A+Q+  
Sbjct: 90  KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 149
Query: 211 CIAFMH--DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
            + F+   +L +IH DLKPEN+LL +                         PK SAIK++
Sbjct: 150 ALLFLATPELSIIHCDLKPENILLCN-------------------------PKRSAIKIV 184
Query: 269 DFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 328
           DFGS+          + +R YR+PEV+LG+ +    D+WS+GCILVE+ TGE LF     
Sbjct: 185 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 244
Query: 329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS---VMKLP--- 382
           ++ +  +  VLG  P H+L +  + A K+  +     P+G  + +  K      K P   
Sbjct: 245 VDQMNKIVEVLGIPPAHILDQAPK-ARKFFEK----LPDGTWNLKKTKDGKREYKPPGTR 299
Query: 383 RLQNLI-----------MQHVDHSAGD---LTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           +L N++                H+  D      L+  +L YDP  R+    AL+H FF +
Sbjct: 300 KLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 359

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score =  192 bits (487), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 120/360 (33%), Positives = 187/360 (51%), Gaps = 53/360 (14%)
Query: 92  GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLA 151
           GE    RY+I S +G+G+FGQV++ +DR  +E VAIKI++  K +   A IE+ +L+ + 
Sbjct: 49  GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 108
Query: 152 KHD-KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
           KHD +     V ++  F +RNH+C+VFE L  +LYD LR  N+R   ++L R+ A+Q+  
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168
Query: 211 CIAFMH--DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
            + F+   +L +IH DLKPEN+LL +                         PK  AIK++
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCN-------------------------PKRXAIKIV 203
Query: 269 DFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 328
           DFGS+          + +R YR+PEV+LG+ +    D+WS+GCILVE+ TGE LF     
Sbjct: 204 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
Query: 329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS---VMKLP--- 382
           ++ +  +  VLG  P H+L +  + A K+  +     P+G  + +  K      K P   
Sbjct: 264 VDQMNKIVEVLGIPPAHILDQAPK-ARKFFEK----LPDGTWNLKKTKDGKREYKPPGTR 318
Query: 383 RLQNLI-----------MQHVDHSAGD---LTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           +L N++                H+  D      L+  +L YDP  R+    AL+H FF +
Sbjct: 319 KLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 378

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score =  190 bits (483), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/363 (32%), Positives = 182/363 (50%), Gaps = 44/363 (12%)
Query: 81  DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAA 140
           DD  G Y+    +++  RY++   +G+G+FGQV++ +D +  + VA+K+VR  K++   A
Sbjct: 81  DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 141 MIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPID 199
             EI +L+ L K DK      + +   F +RNHIC+ FE L  +LY+ ++KN ++ F + 
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 200 LVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM 259
           LVR+ A  +L+C+  +H   +IH DLKPEN+LL                         + 
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILL-------------------------KQ 235
Query: 260 PKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
              S IKVIDFGS+ YE       + +R YRAPEVILG  +  P D+WS+GCIL EL TG
Sbjct: 236 QGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Query: 320 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR--------------GRLDW 365
             L    +  + LA M  +LG +P   L    + A+ +V                G +  
Sbjct: 296 YPLLPGEDEGDQLACMIELLG-MPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVL 354
Query: 366 PEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 425
             G + R  ++   +     N +    D    D    L+  L +DP  R+T  +ALRHP+
Sbjct: 355 NGGRSRRGKLRGPPESREWGNALKGCDDPLFLD---FLKQCLEWDPAVRMTPGQALRHPW 411
Query: 426 FTR 428
             R
Sbjct: 412 LRR 414

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score =  189 bits (481), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/363 (32%), Positives = 182/363 (50%), Gaps = 44/363 (12%)
Query: 81  DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAA 140
           DD  G Y+    +++  RY++   +G+G+FGQV++ +D +  + VA+K+VR  K++   A
Sbjct: 81  DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 141 MIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPID 199
             EI +L+ L K DK      + +   F +RNHIC+ FE L  +LY+ ++KN ++ F + 
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 200 LVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM 259
           LVR+ A  +L+C+  +H   +IH DLKPEN+LL                         + 
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILL-------------------------KQ 235
Query: 260 PKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
              S IKVIDFGS+ YE       + +R YRAPEVILG  +  P D+WS+GCIL EL TG
Sbjct: 236 QGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Query: 320 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR--------------GRLDW 365
             L    +  + LA M  +LG +P   L    + A+ +V                G +  
Sbjct: 296 YPLLPGEDEGDQLACMIELLG-MPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVL 354
Query: 366 PEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 425
             G + R  ++   +     N +    D    D    L+  L +DP  R+T  +ALRHP+
Sbjct: 355 NGGRSRRGKLRGPPESREWGNALKGCDDPLFLD---FLKQCLEWDPAVRMTPGQALRHPW 411
Query: 426 FTR 428
             R
Sbjct: 412 LRR 414

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score =  189 bits (480), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/363 (32%), Positives = 181/363 (49%), Gaps = 44/363 (12%)
Query: 81  DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAA 140
           DD  G Y+    +++  RY++   +G+G FGQV++ +D +  + VA+K+VR  K++   A
Sbjct: 81  DDDQGSYVQVPHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 141 MIEIEVLQQLAKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPID 199
             EI +L+ L K DK      + +   F +RNHIC+ FE L  +LY+ ++KN ++ F + 
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 200 LVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM 259
           LVR+ A  +L+C+  +H   +IH DLKPEN+LL                         + 
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILL-------------------------KQ 235
Query: 260 PKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
              S IKVIDFGS+ YE       + +R YRAPEVILG  +  P D+WS+GCIL EL TG
Sbjct: 236 QGRSGIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Query: 320 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR--------------GRLDW 365
             L    +  + LA M  +LG +P   L    + A+ +V                G +  
Sbjct: 296 YPLLPGEDEGDQLACMIELLG-MPXQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVL 354
Query: 366 PEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 425
             G + R  ++   +     N +    D    D    L+  L +DP  R+T  +ALRHP+
Sbjct: 355 NGGRSRRGKLRGPPESREWGNALKGCDDPLFLD---FLKQCLEWDPAVRMTPGQALRHPW 411
Query: 426 FTR 428
             R
Sbjct: 412 LRR 414

>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide Length = 397

Iteration: 1
 Score =  174 bits (442), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 192/386 (49%), Gaps = 53/386 (13%)
Query: 83  KDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI 142
           K G+++  +G+    RY +  K+G G F  V   WD + K+ VA+K+V+  + Y E A+ 
Sbjct: 23  KGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALD 82
Query: 143 EIEVLQQLAKHDKGG-NRCVQIRNWFDYR------NHICIVFEKLGSSLYDFLRKNNYRS 195
           EI +L+ +   D    NR + ++   D++       HIC+VFE LG  L  ++ K+NY+ 
Sbjct: 83  EIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQG 142
Query: 196 FPIDLVREIARQLLECIAFMHDLC-MIHTDLKPENVLL-VSSEYIK-----VPDYKSSLH 248
            P+  V++I +Q+L+ + ++H  C +IHTD+KPEN+LL V+ +YI+       +++ S  
Sbjct: 143 LPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGA 202
Query: 249 TPKDSSYFKRMPKSSA----------------IKVIDFGSTTYERPDQNYIVSTRHYRAP 292
            P   S     P ++                 +K+ D G+  +        + TR YR+ 
Sbjct: 203 PPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSL 262
Query: 293 EVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE------HLAMMERVLGPLPQHM 346
           EV++G G+  P DIWS  C+  EL TG+ LF+ H   E      H+A++  +LG +P+ +
Sbjct: 263 EVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKL 322
Query: 347 LKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP--RLQNLIMQHVDHS---AGDLTH 401
           +       E + ++G L            K + KL    L  ++++  + S   A   T 
Sbjct: 323 IVAGKYSKEFFTKKGDL------------KHITKLKPWGLFEVLVEKYEWSQEEAAGFTD 370
Query: 402 LLQGLLRYDPTDRLTAREALRHPFFT 427
            L  +L   P  R TA E LRHP+  
Sbjct: 371 FLLPMLELIPEKRATAAECLRHPWLN 396

>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its Substrate AsfSF2 Length = 381

Iteration: 1
 Score =  174 bits (441), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 192/386 (49%), Gaps = 53/386 (13%)
Query: 83  KDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI 142
           K G+++  +G+    RY +  K+G G F  V   WD + K+ VA+K+V+  + Y E A+ 
Sbjct: 7   KGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALD 66
Query: 143 EIEVLQQLAKHDKGG-NRCVQIRNWFDYR------NHICIVFEKLGSSLYDFLRKNNYRS 195
           EI +L+ +   D    NR + ++   D++       HIC+VFE LG  L  ++ K+NY+ 
Sbjct: 67  EIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQG 126
Query: 196 FPIDLVREIARQLLECIAFMHDLC-MIHTDLKPENVLL-VSSEYIK-----VPDYKSSLH 248
            P+  V++I +Q+L+ + ++H  C +IHTD+KPEN+LL V+ +YI+       +++ S  
Sbjct: 127 LPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGA 186
Query: 249 TPKDSSYFKRMPKSSA----------------IKVIDFGSTTYERPDQNYIVSTRHYRAP 292
            P   S     P ++                 +K+ D G+  +        + TR YR+ 
Sbjct: 187 PPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSL 246
Query: 293 EVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE------HLAMMERVLGPLPQHM 346
           EV++G G+  P DIWS  C+  EL TG+ LF+ H   E      H+A++  +LG +P+ +
Sbjct: 247 EVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKL 306
Query: 347 LKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP--RLQNLIMQHVDHS---AGDLTH 401
           +       E + ++G L            K + KL    L  ++++  + S   A   T 
Sbjct: 307 IVAGKYSKEFFTKKGDL------------KHITKLKPWGLFEVLVEKYEWSQEEAAGFTD 354
Query: 402 LLQGLLRYDPTDRLTAREALRHPFFT 427
            L  +L   P  R TA E LRHP+  
Sbjct: 355 FLLPMLELIPEKRATAAECLRHPWLN 380

>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific Kinase 2 (Srpk2) Bound To Purvalanol B Length = 389

Iteration: 1
 Score =  170 bits (431), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 186/382 (48%), Gaps = 47/382 (12%)
Query: 83  KDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI 142
           K G++   +G+    RY +  K+G G F  V  CWD + K  VA+K+V+  + Y E A+ 
Sbjct: 17  KGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALD 76
Query: 143 EIEVLQQLAKHDKGG---NRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRS 195
           EI++L+ + + D      +  VQ+ + F        H+C+VFE LG  L  ++ K+NY+ 
Sbjct: 77  EIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQG 136
Query: 196 FPIDLVREIARQLLECIAFMHDLC-MIHTDLKPENVLL-VSSEYIK-----VPDYKSSLH 248
            P+  V+ I RQ+L+ + ++H  C +IHTD+KPEN+L+ V   Y++       +++ +  
Sbjct: 137 LPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGA 196
Query: 249 TPKDSSYFKRMPKSSA--------------IKVIDFGSTTYERPDQNYIVSTRHYRAPEV 294
            P   S     P +                +K+ D G+  +        + TR YR+ EV
Sbjct: 197 PPPSGSAVSTAPAADLLVNPLDPRNADKIRVKIADLGNACWVHKHFTEDIQTRQYRSIEV 256
Query: 295 ILGLGWTYPCDIWSVGCILVELCTGEALFQTHE------NLEHLAMMERVLGPLPQHMLK 348
           ++G G++ P DIWS  C+  EL TG+ LF+ H       + +H+A +  +LG +P+H   
Sbjct: 257 LIGAGYSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFAL 316
Query: 349 RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD---HSAGDLTHLLQG 405
                 E + RRG L        R   K  +K   L +++++        A   T  L  
Sbjct: 317 SGKYSREFFNRRGEL--------RHITK--LKPWSLFDVLVEKYGWPHEDAAQFTDFLIP 366
Query: 406 LLRYDPTDRLTAREALRHPFFT 427
           +L   P  R +A E LRHP+  
Sbjct: 367 MLEMVPEKRASAGECLRHPWLN 388

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score =  152 bits (385), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 176/352 (50%), Gaps = 55/352 (15%)
Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK- 155
           +RY +  K+G G F  V    D      VA+KIVRG K Y EAA  EI++LQ++   D  
Sbjct: 19  ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNT 78
Query: 156 -----GGNRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIAR 206
                G N  +++ + F+++     H+ +VFE LG +L   ++K  +R  P+  V++I++
Sbjct: 79  KEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISK 138
Query: 207 QLLECIAFMHDLC-MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 265
           QLL  + +MH  C +IHTD+KPENVL+   E +  P+                      I
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVLM---EIVDSPE------------------NLIQI 177
Query: 266 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 325
           K+ D G+  +        + TR YR+PEV+LG  W    DIWS  C++ EL TG+ LF+ 
Sbjct: 178 KIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEP 237
Query: 326 HE------NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVM 379
            E      + +H+A +  +LG LP ++L+       KY R           SR  ++++ 
Sbjct: 238 DEGHSYTKDDDHIAQIIELLGELPSYLLRN-----GKYTRT-------FFNSRGLLRNIS 285
Query: 380 KLP--RLQNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
           KL    L++++ +    S   A +++  L  +L+ DP  R  A   + HP+ 
Sbjct: 286 KLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 337

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score =  152 bits (384), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 176/352 (50%), Gaps = 55/352 (15%)
Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK- 155
           +RY +  K+G G F  V    D      VA+KIVRG K Y EAA  EI++LQ++   D  
Sbjct: 19  ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNT 78
Query: 156 -----GGNRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIAR 206
                G N  +++ + F+++     H+ +VFE LG +L   ++K  +R  P+  V++I++
Sbjct: 79  KEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISK 138
Query: 207 QLLECIAFMHDLC-MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 265
           QLL  + +MH  C +IHTD+KPENVL+   E +  P+                      I
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVLM---EIVDSPE------------------NLIQI 177
Query: 266 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 325
           K+ D G+  +        + TR YR+PEV+LG  W    DIWS  C++ EL TG+ LF+ 
Sbjct: 178 KIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEP 237
Query: 326 HE------NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVM 379
            E      + +H+A +  +LG LP ++L+       KY R           SR  ++++ 
Sbjct: 238 DEGHSYTKDDDHIAQIIELLGELPSYLLRN-----GKYTRT-------FFNSRGLLRNIS 285
Query: 380 KLP--RLQNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
           KL    L++++ +    S   A +++  L  +L+ DP  R  A   + HP+ 
Sbjct: 286 KLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 337

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score =  119 bits (297), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 155/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 10  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 64
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L DF+  +     P+ L++    QLL+ +AF H   +
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKPEN LL+++E                           AIK+ DFG +  +  P 
Sbjct: 125 LHRDLKPEN-LLINTE--------------------------GAIKLADFGLARAFGVPV 157
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 158 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 218 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 258
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 259 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 155/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 12  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 66
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L DF+  +     P+ L++    QLL+ +AF H   +
Sbjct: 67  VKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 127 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 159
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 160 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 219
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 220 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 260
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 261 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 289

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score =  118 bits (296), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 155/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 13  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 67
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L DF+  +     P+ L++    QLL+ +AF H   +
Sbjct: 68  VKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 128 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 160
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 161 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 220
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 221 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 261
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 262 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score =  117 bits (292), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 13  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 67
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 68  VKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKPEN LL+++E                           AIK+ DFG +  +  P 
Sbjct: 128 LHRDLKPEN-LLINTE--------------------------GAIKLADFGLARAFGVPV 160
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 161 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 220
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 221 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 261
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 262 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 11  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 65
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 66  VKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKPEN LL+++E                           AIK+ DFG +  +  P 
Sbjct: 126 LHRDLKPEN-LLINTE--------------------------GAIKLADFGLARAFGVPV 158
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 159 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 218
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 219 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 259
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 260 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 288

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 12  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 66
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 67  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKPEN LL+++E                           AIK+ DFG +  +  P 
Sbjct: 127 LHRDLKPEN-LLINTE--------------------------GAIKLADFGLARAFGVPV 159
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 160 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 219
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 220 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 260
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 261 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 289

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score =  116 bits (290), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 11  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 65
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 66  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKPEN LL+++E                           AIK+ DFG +  +  P 
Sbjct: 126 LHRDLKPEN-LLINTE--------------------------GAIKLADFGLARAFGVPV 158
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 159 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 218
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 219 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 259
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 260 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 288

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score =  116 bits (290), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 17  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 71
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 72  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 131
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 132 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 164
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 165 RTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 224
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 225 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 265
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 266 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 294

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score =  115 bits (289), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 10  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 64
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 125 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 157
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 158 RTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 218 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 258
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 259 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score =  115 bits (289), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 17  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 71
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 72  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 131
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 132 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 164
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 165 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 224
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 225 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 265
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 266 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 294

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  115 bits (289), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 12  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 66
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 67  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 127 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 159
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 160 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 219
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 220 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 260
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 261 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 289

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score =  115 bits (288), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 14  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 68
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 69  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 128
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 129 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 161
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 162 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 221
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 222 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 262
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 263 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 291

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score =  115 bits (288), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 10  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 64
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 125 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 157
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 158 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 218 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 258
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 259 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score =  115 bits (288), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 13  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 67
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE +   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 68  VKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 128 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 160
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 161 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 220
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 221 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 261
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 262 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score =  115 bits (288), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 9   KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 63
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 64  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 124 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 156
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 217 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 257
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 258 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score =  115 bits (288), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 13  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 67
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 68  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 128 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 160
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 161 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 220
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 221 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 261
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 262 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score =  115 bits (288), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 11  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 65
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 66  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 126 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 158
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 159 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 218
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 219 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 259
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 260 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 288

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score =  115 bits (288), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 170/340 (50%), Gaps = 20/340 (5%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREA--AMIEIEVLQQLAKHD 154
           +Y++  K+G+G +G V +  DR   E+VA+K I    +   +A     EI +L +L+ H+
Sbjct: 10  KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
              N    +R   D    + +VF+ + + L+  +R N     P+   + +  QL++ I +
Sbjct: 70  NIVNLLNVLR--ADNDRDVYLVFDYMETDLHAVIRANILE--PVH-KQYVVYQLIKVIKY 124
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H   ++H D+KP N+LL +  ++KV D+  S            +P S      +F    
Sbjct: 125 LHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDD-- 182
Query: 275 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 333
            ++P     V+TR YRAPE++LG   +T   D+WS+GCIL E+  G+ +F     +  L 
Sbjct: 183 -DQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL- 240
Query: 334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 393
             ER++G +     + V+     + +       E    R+S K  +   + +NL+++ ++
Sbjct: 241 --ERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDI-FTKWKNLLLK-IN 296
Query: 394 HSAG---DLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
             A    +   LL  LL+++P  R++A +AL+HPF +  H
Sbjct: 297 PKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFH 336

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score =  115 bits (288), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 13  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 67
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 68  VKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 128 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 160
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 161 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 220
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 221 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 261
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 262 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score =  115 bits (288), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 13  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 67
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 68  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 128 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 160
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 161 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 220
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 221 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 261
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 262 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score =  115 bits (288), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 12  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 66
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 67  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 127 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 159
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 160 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 219
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 220 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 260
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 261 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 289

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score =  115 bits (288), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 10  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 64
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 125 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 157
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 158 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 218 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 258
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 259 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score =  115 bits (288), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 9   KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 63
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 64  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 124 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 156
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 217 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 257
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 258 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score =  115 bits (288), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 11  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 65
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 66  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 126 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 158
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 159 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 218
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 219 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 259
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 260 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 288

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score =  115 bits (287), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 10  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 64
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 125 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 157
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 158 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 218 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 258
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 259 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score =  115 bits (287), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 14  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 68
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 69  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 128
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 129 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 161
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 162 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 221
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 222 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 262
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 263 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 291

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score =  115 bits (287), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 10  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 64
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 125 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 157
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 158 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 218 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 258
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 259 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score =  115 bits (287), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 11  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 65
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 66  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 126 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 158
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 159 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 218
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 219 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 259
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 260 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 288

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score =  115 bits (287), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 9   KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 63
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 64  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 124 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 156
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 157 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 217 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 257
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 258 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score =  115 bits (287), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 9   KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 63
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 64  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 124 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 156
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 157 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 217 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 257
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 258 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score =  115 bits (287), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 10  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 64
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 125 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 157
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 158 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 218 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 258
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 259 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score =  115 bits (287), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 10  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 64
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 125 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 157
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 158 RTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 218 RTLGT-PDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 258
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 259 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score =  114 bits (286), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 9   KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 63
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE +   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 64  VKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 124 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 156
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 217 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 257
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 258 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score =  114 bits (285), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 162/343 (47%), Gaps = 66/343 (19%)
Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK---YREAAMIEIEVLQQLA 151
           +  +Y+   K+GEG++G V +C +R+  ++VAIK     +     ++ A+ EI +L+QL 
Sbjct: 1   MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQL- 59
Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
           KH       V +   F  +  + +VFE    ++   L +   R  P  LV+ I  Q L+ 
Sbjct: 60  KHPN----LVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQA 114
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           + F H    IH D+KPEN+L+                            K S IK+ DFG
Sbjct: 115 VNFCHKHNCIHRDVKPENILIT---------------------------KHSVIKLCDFG 147
Query: 272 STTYERPDQNYI---VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 327
                    +Y    V+TR YR+PE+++G   +  P D+W++GC+  EL +G  L+    
Sbjct: 148 FARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKS 207
Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           +++ L ++ + LG L       + RH + +             S     S +K+P  ++ 
Sbjct: 208 DVDQLYLIRKTLGDL-------IPRHQQVF-------------STNQYFSGVKIPDPED- 246
Query: 388 IMQHVDHSAGDLTH----LLQGLLRYDPTDRLTAREALRHPFF 426
            M+ ++    ++++    LL+G L  DPT+RLT  + L HP+F
Sbjct: 247 -MEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYF 288

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score =  114 bits (284), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 154/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +      
Sbjct: 10  KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN-----I 64
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ ++F H   +
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRV 124
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 125 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 157
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 158 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 218 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 258
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 259 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score =  113 bits (283), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 162/383 (42%), Gaps = 97/383 (25%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVL----- 147
           E  + +Y +   +G G+FG V E +D E  +  A+K V    +Y+   +  ++VL     
Sbjct: 3   ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNI 62
Query: 148 ------------------QQLAKHDKGGNRCVQIRNWF-------DYRNHICIVFEKLGS 182
                             Q    H+K G +   + N             ++ ++ E +  
Sbjct: 63  IKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD 122
Query: 183 SLYDFLRK--NNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKV 240
           +L+  L+    + RS P++L+     QL   + F+H L + H D+KP+N+L+ S      
Sbjct: 123 TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS------ 176
Query: 241 PDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI--VSTRHYRAPEVILGL 298
                               K + +K+ DFGS     P +  +  + +R YRAPE++LG 
Sbjct: 177 --------------------KDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGA 216
Query: 299 G-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKY 357
             +T   D+WS+GC+  EL  G+ LF    +++ L  + +++G   +  + R++ H  + 
Sbjct: 217 TEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTE- 275
Query: 358 VRRGRL---DW----PEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD 410
           VR   L   DW    PEG  S                              LL+ +LRY+
Sbjct: 276 VRFPTLKAKDWRKILPEGTPSLA--------------------------IDLLEQILRYE 309
Query: 411 PTDRLTAREALRHPFFTRDHLRR 433
           P  R+   EA+ HPFF  DHLR 
Sbjct: 310 PDLRINPYEAMAHPFF--DHLRN 330

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 153/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+  +R     +     A+ EI +L++L   +      
Sbjct: 10  KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN-----I 64
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 125 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 157
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 158 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 218 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 258
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 259 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 153/331 (46%), Gaps = 61/331 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEGT+G V +  ++   E+VA+  +R     +     A+ EI +L++L   +      
Sbjct: 9   KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN-----I 63
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H   +
Sbjct: 64  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPD 279
           +H DLKP+N LL+++E                           AIK+ DFG +  +  P 
Sbjct: 124 LHRDLKPQN-LLINTE--------------------------GAIKLADFGLARAFGVPV 156
Query: 280 QNYI--VSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
           + Y   V T  YRAPE++LG  + +   DIWS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 216
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHS 395
           R LG  P  ++                 WP   +  +   S  K  R   + ++  +D  
Sbjct: 217 RTLG-TPDEVV-----------------WPGVTSMPDYKPSFPKWARQDFSKVVPPLDE- 257
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 258 --DGRSLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 162/351 (46%), Gaps = 77/351 (21%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKH 153
           +S++K   K+G GT+  V +  ++     VA+K V+    +     A+ EI ++++L KH
Sbjct: 4   SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL-KH 62
Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRK----NNYRSFPIDLVREIARQLL 209
           +      V++ +     N + +VFE + + L  ++      N  R   ++LV+    QLL
Sbjct: 63  EN----IVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLL 118
Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
           + +AF H+  ++H DLKP+N+L+     +K+ D+               + ++  I V  
Sbjct: 119 QGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFG--------------LARAFGIPVNT 164
Query: 270 FGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN 328
           F S           V T  YRAP+V++G   ++   DIWS GCIL E+ TG+ LF    +
Sbjct: 165 FSSE----------VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND 214
Query: 329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR----- 383
            E L ++  ++G  P   L                 WP          SV KLP+     
Sbjct: 215 EEQLKLIFDIMGT-PNESL-----------------WP----------SVTKLPKYNPNI 246
Query: 384 -------LQNLIMQHVDHSA-GDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
                  L+ ++  H      G+L   L GLL+ +P  RL+A++AL HP+F
Sbjct: 247 QQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF 297

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score =  109 bits (273), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 154/339 (45%), Gaps = 60/339 (17%)
Query: 98  RYKIHSKMGEGTFGQVLECWD-RERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKH 153
           +Y+  +++GEG +G+V +  D +     VA+K VR   G +    + + E+ VL+ L   
Sbjct: 12  QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 154 DKGG-----NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQL 208
           +        + C   R   D    + +VFE +   L  +L K      P + ++++  QL
Sbjct: 72  EHPNVVRLFDVCTVSRT--DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
           L  + F+H   ++H DLKP+N+L+ SS  IK+ D+  +        Y  +M  +S     
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA------RIYSFQMALTS----- 178
Query: 269 DFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 328
                         +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF+   +
Sbjct: 179 --------------VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD 224
Query: 329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRLQNL 387
           ++ L  +  V+G LP                 G  DWP   A  R++  S    P ++  
Sbjct: 225 VDQLGKILDVIG-LP-----------------GEEDWPRDVALPRQAFHSKSAQP-IEKF 265
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
           +   +D    D   LL   L ++P  R++A  AL HP+F
Sbjct: 266 VTD-IDELGKD---LLLKCLTFNPAKRISAYSALSHPYF 300

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 154/339 (45%), Gaps = 60/339 (17%)
Query: 98  RYKIHSKMGEGTFGQVLECWD-RERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKH 153
           +Y+  +++GEG +G+V +  D +     VA+K VR   G +    + + E+ VL+ L   
Sbjct: 12  QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 154 DKGG-----NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQL 208
           +        + C   R   D    + +VFE +   L  +L K      P + ++++  QL
Sbjct: 72  EHPNVVRLFDVCTVSRT--DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
           L  + F+H   ++H DLKP+N+L+ SS  IK+ D+  +        Y  +M  +S     
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA------RIYSFQMALTS----- 178
Query: 269 DFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 328
                         +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF+   +
Sbjct: 179 --------------VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD 224
Query: 329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRLQNL 387
           ++ L  +  V+G LP                 G  DWP   A  R++  S    P ++  
Sbjct: 225 VDQLGKILDVIG-LP-----------------GEEDWPRDVALPRQAFHSKSAQP-IEKF 265
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
           +   +D    D   LL   L ++P  R++A  AL HP+F
Sbjct: 266 VTD-IDELGKD---LLLKCLTFNPAKRISAYSALSHPYF 300

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 154/339 (45%), Gaps = 60/339 (17%)
Query: 98  RYKIHSKMGEGTFGQVLECWD-RERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKH 153
           +Y+  +++GEG +G+V +  D +     VA+K VR   G +    + + E+ VL+ L   
Sbjct: 12  QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 154 DKGG-----NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQL 208
           +        + C   R   D    + +VFE +   L  +L K      P + ++++  QL
Sbjct: 72  EHPNVVRLFDVCTVSRT--DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
           L  + F+H   ++H DLKP+N+L+ SS  IK+ D+  +        Y  +M  +S     
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA------RIYSFQMALTS----- 178
Query: 269 DFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 328
                         +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF+   +
Sbjct: 179 --------------VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD 224
Query: 329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRLQNL 387
           ++ L  +  V+G LP                 G  DWP   A  R++  S    P ++  
Sbjct: 225 VDQLGKILDVIG-LP-----------------GEEDWPRDVALPRQAFHSKSAQP-IEKF 265
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
           +   +D    D   LL   L ++P  R++A  AL HP+F
Sbjct: 266 VTD-IDELGKD---LLLKCLTFNPAKRISAYSALSHPYF 300

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score =  108 bits (271), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/351 (25%), Positives = 151/351 (43%), Gaps = 62/351 (17%)
Query: 91  LGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQL 150
           LG   TSRY+  +++G G +G V +  D      VA+K VR          + I  ++++
Sbjct: 3   LGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREV 62
Query: 151 A--------KHD---KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPID 199
           A        +H    +  + C   R   D    + +VFE +   L  +L K      P +
Sbjct: 63  ALLRRLEAFEHPNVVRLMDVCATSRT--DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE 120
Query: 200 LVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM 259
            ++++ RQ L  + F+H  C++H DLKPEN+L+ S   +K+ D+  +        Y  +M
Sbjct: 121 TIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA------RIYSYQM 174
Query: 260 PKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
             +                    +V T  YRAPEV+L   +  P D+WSVGCI  E+   
Sbjct: 175 ALTP-------------------VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRR 215
Query: 320 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSV 378
           + LF  +   + L  +  ++G  P+                   DWP   +  R +    
Sbjct: 216 KPLFCGNSEADQLGKIFDLIGLPPED------------------DWPRDVSLPRGAFPP- 256
Query: 379 MKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
            + PR    ++  ++ S      LL  +L ++P  R++A  AL+H +  +D
Sbjct: 257 -RGPRPVQSVVPEMEESGA---QLLLEMLTFNPHKRISAFRALQHSYLHKD 303

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score =  108 bits (270), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 149/343 (43%), Gaps = 59/343 (17%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAK 152
           TSRY+  +++G G +G V +  D      VA+K VR   G +    + + E+ +L++L  
Sbjct: 3   TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 153 HDKGG-----NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQ 207
            +        + C   R   D    + +VFE +   L  +L K      P + ++++ RQ
Sbjct: 63  FEHPNVVRLMDVCATSRT--DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
            L  + F+H  C++H DLKPEN+L+ S   +K+ D+  +       + F           
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP---------- 170
Query: 268 IDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 327
                          +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF  + 
Sbjct: 171 ---------------VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS 215
Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRLQN 386
             + L  +  ++G  P+                   DWP   +  R +     + PR   
Sbjct: 216 EADQLGKIFDLIGLPPED------------------DWPRDVSLPRGAFPP--RGPRPVQ 255
Query: 387 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
            ++  ++ S      LL  +L ++P  R++A  AL+H +  +D
Sbjct: 256 SVVPEMEESGA---QLLLEMLTFNPHKRISAFRALQHSYLHKD 295

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score =  108 bits (270), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 152/343 (44%), Gaps = 59/343 (17%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAK 152
           TSRY+  +++G G +G V +  D      VA+K VR   G +    + + E+ +L++L  
Sbjct: 3   TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 153 HDKGG-----NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQ 207
            +        + C   R   D    + +VFE +   L  +L K      P + ++++ RQ
Sbjct: 63  FEHPNVVRLMDVCATSRT--DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
            L  + F+H  C++H DLKPEN+L+ S   +K+ D+  +    +  SY   +        
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA----RIYSYQMAL-------- 168
Query: 268 IDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 327
                        + +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF  + 
Sbjct: 169 -------------DPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS 215
Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRLQN 386
             + L  +  ++G  P+                   DWP   +  R +     + PR   
Sbjct: 216 EADQLGKIFDLIGLPPED------------------DWPRDVSLPRGAFPP--RGPRPVQ 255
Query: 387 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
            ++  ++ S      LL  +L ++P  R++A  AL+H +  +D
Sbjct: 256 SVVPEMEESGA---QLLLEMLTFNPHKRISAFRALQHSYLHKD 295

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score =  108 bits (269), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 159/362 (43%), Gaps = 88/362 (24%)
Query: 92  GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLA 151
           GE     Y     +G G+FG V +    E  E VAIK V   K+++     E+++++ + 
Sbjct: 35  GEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNR---ELQIMR-IV 89
Query: 152 KHDKGGNRCVQIRNWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVR 202
           KH       V ++ +F Y N        + +V E +  ++Y   R      ++ P+ L++
Sbjct: 90  KHPN----VVDLKAFF-YSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIK 144
Query: 203 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 262
               QLL  +A++H + + H D+KP+N+LL                           P S
Sbjct: 145 LYMYQLLRSLAYIHSIGICHRDIKPQNLLL--------------------------DPPS 178
Query: 263 SAIKVIDFGSTTY---ERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCT 318
             +K+IDFGS        P+ + I S R+YRAPE+I G   +T   DIWS GC++ EL  
Sbjct: 179 GVLKLIDFGSAKILIAGEPNVSXICS-RYYRAPELIFGATNYTTNIDIWSTGCVMAELMQ 237
Query: 319 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSV 378
           G+ LF     ++ L  + +VL                            G  SRE IK++
Sbjct: 238 GQPLFPGESGIDQLVEIIKVL----------------------------GTPSREQIKTM 269
Query: 379 M------KLPRLQNLIMQHV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
                  K P+++      V    +  D   L+  LL Y P+ RLTA EAL HPFF  D 
Sbjct: 270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF--DE 327
Query: 431 LR 432
           LR
Sbjct: 328 LR 329

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score =  107 bits (268), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 151/343 (44%), Gaps = 59/343 (17%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAK 152
           TSRY+  +++G G +G V +  D      VA+K VR   G +    + + E+ +L++L  
Sbjct: 3   TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 153 HDKGG-----NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQ 207
            +        + C   R   D    + +VFE +   L  +L K      P + ++++ RQ
Sbjct: 63  FEHPNVVRLMDVCATSRT--DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
            L  + F+H  C++H DLKPEN+L+ S   +K+ D+  +        Y  +M  +     
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA------RIYSYQMALAP---- 170
Query: 268 IDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 327
                          +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF  + 
Sbjct: 171 ---------------VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS 215
Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRLQN 386
             + L  +  ++G  P+                   DWP   +  R +     + PR   
Sbjct: 216 EADQLGKIFDLIGLPPED------------------DWPRDVSLPRGAFPP--RGPRPVQ 255
Query: 387 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
            ++  ++ S      LL  +L ++P  R++A  AL+H +  +D
Sbjct: 256 SVVPEMEESGA---QLLLEMLTFNPHKRISAFRALQHSYLHKD 295

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 73
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++         D V+ +
Sbjct: 74  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTD---DHVQFL 130
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + + S 
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDSE 163
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 164 LKILDFGLCRHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 224 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 267
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 268 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 155/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 25  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 75
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 76  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 132
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + + S 
Sbjct: 133 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDSE 165
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 166 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 226 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 269
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 270 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 314

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 155/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 29  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 79
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 80  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 136
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + + S 
Sbjct: 137 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDSE 169
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 170 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 230 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 273
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 274 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 318

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score =  105 bits (261), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 153/348 (43%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 73
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++         D V+ +
Sbjct: 74  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTD---DHVQFL 130
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDXE 163
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 164 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 224 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 267
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 268 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score =  104 bits (260), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 153/348 (43%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 73
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++         D V+ +
Sbjct: 74  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTD---DHVQFL 130
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 163
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 164 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 224 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 267
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 268 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score =  104 bits (260), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 153/348 (43%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 19  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL---------R 69
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++         D V+ +
Sbjct: 70  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFL 126
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 127 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 159
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 160 LKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 220 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPK 263
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 264 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 308

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score =  104 bits (260), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 151/349 (43%), Gaps = 75/349 (21%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    +A+K        I+   + YRE          +
Sbjct: 52  RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYREL---------R 102
Query: 150 LAKHDKGGNRCVQIRNWF------DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVRE 203
           L KH K  N  + + + F      +  N + +V   +G+ L + ++         D V+ 
Sbjct: 103 LLKHMKHEN-VIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQF 158
Query: 204 IARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSS 263
           +  Q+L  + ++H   +IH DLKP N+                            + +  
Sbjct: 159 LIYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDC 191
Query: 264 AIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEAL 322
            +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  L
Sbjct: 192 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTL 251
Query: 323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP 382
           F   +++  L  + R+ G  P  ++ R+  H                 +R  I S+ ++P
Sbjct: 252 FPGTDHINQLQQIMRLTGTPPASVISRMPSH----------------EARNYINSLPQMP 295
Query: 383 RLQNLIMQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +        V   A  L   LL+ +L  D   R+TA EAL HP+F++ H
Sbjct: 296 KRN---FADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQYH 341

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score =  104 bits (260), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 42  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL---------R 92
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 93  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 149
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 150 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 182
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 183 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 242
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 243 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPK 286
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 287 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 331

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score =  104 bits (260), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 153/348 (43%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 19  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL---------R 69
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++         D V+ +
Sbjct: 70  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFL 126
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 127 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 159
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 160 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 220 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPK 263
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 264 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 308

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 43  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL---------R 93
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 94  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 150
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 151 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 183
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 184 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 244 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPK 287
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 288 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 332

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 153/348 (43%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL---------R 73
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++         D V+ +
Sbjct: 74  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFL 130
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 163
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 164 LKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 224 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 267
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 268 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 153/348 (43%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL---------R 73
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++         D V+ +
Sbjct: 74  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFL 130
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 163
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 164 LKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 224 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPK 267
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 268 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 43  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL---------R 93
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 94  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 150
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 151 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 183
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 184 LKILDFGLARHTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 244 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPK 287
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 288 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 332

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL---------R 73
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 74  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 163
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 164 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 224 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPK 267
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 268 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 153/348 (43%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 28  RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 78
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++         D V+ +
Sbjct: 79  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFL 135
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 136 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDXE 168
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 169 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 229 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 272
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 273 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 317

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 153/348 (43%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 19  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL---------R 69
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++         D V+ +
Sbjct: 70  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTD---DHVQFL 126
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 127 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 159
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 160 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 220 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPK 263
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 264 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 308

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 34  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 84
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 85  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 141
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 142 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDXE 174
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 175 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 234
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 235 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 278
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 279 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 323

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 28  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 78
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 79  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 135
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 136 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDXE 168
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 169 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 229 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 272
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 273 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 317

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 73
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 74  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 163
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 164 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLF 223
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 224 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 267
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 268 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 29  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL---------R 79
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 80  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 136
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 137 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 169
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 170 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 230 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPK 273
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 274 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 318

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 30  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 80
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 81  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 137
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 138 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 170
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 171 LKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 231 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 274
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 275 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 319

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 153/348 (43%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 73
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++         D V+ +
Sbjct: 74  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFL 130
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 163
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 164 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 224 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 267
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 268 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 155/341 (45%), Gaps = 39/341 (11%)
Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK--YREAAMIEIEVLQQLA 151
           N++S +++ S +GEG +G V     +   E+VAIK +    K  +    + EI++L+   
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
             +      +Q  + F+  N + I+ E + + L+   R  + +    D ++    Q L  
Sbjct: 68  HENIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQYFIYQTLRA 124
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           +  +H   +IH DLKP N+L+ S+  +KV D+              R+   SA    D  
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFG-----------LARIIDESAA---DNS 170
Query: 272 STTYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
             T ++      V+TR YRAPEV+L    ++   D+WS GCIL EL     +F   +   
Sbjct: 171 EPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH 230
Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIM 389
            L ++  ++G            H++  +R       E   +RE IKS+   P      + 
Sbjct: 231 QLLLIFGIIG----------TPHSDNDLR-----CIESPRAREYIKSLPMYPAAPLEKMF 275
Query: 390 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
             V+    DL   LQ +L +DP  R+TA+EAL HP+    H
Sbjct: 276 PRVNPKGIDL---LQRMLVFDPAKRITAKEALEHPYLQTYH 313

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 30  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 80
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 81  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 137
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 138 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 170
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 171 LKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 231 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 274
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 275 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 319

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 153/348 (43%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 43  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 93
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++         D V+ +
Sbjct: 94  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFL 150
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 151 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 183
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 184 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 244 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 287
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 288 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 332

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 35  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 85
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 86  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 142
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 143 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 175
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 176 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 236 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 279
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 280 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 324

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 153/348 (43%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 28  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 78
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++         D V+ +
Sbjct: 79  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFL 135
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 136 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 168
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 169 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 229 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 272
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 273 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 317

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 35  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 85
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 86  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 142
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 143 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 175
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 176 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 236 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 279
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 280 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 324

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 42  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 92
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 93  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 149
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 150 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 182
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 183 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 242
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 243 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 286
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 287 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 331

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 73
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 74  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 163
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 164 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 224 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 267
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 268 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 153/348 (43%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 25  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 75
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++         D V+ +
Sbjct: 76  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFL 132
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 133 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 165
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 166 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 226 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 269
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 270 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 314

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 153/348 (43%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 19  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 69
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++         D V+ +
Sbjct: 70  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFL 126
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 127 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 159
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 160 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 220 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 263
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 264 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 308

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 153/348 (43%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 46  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 96
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++         D V+ +
Sbjct: 97  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFL 153
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 154 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 186
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 187 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 246
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 247 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 290
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 291 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 335

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 153/348 (43%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 20  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 70
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++         D V+ +
Sbjct: 71  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFL 127
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 128 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 160
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 161 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 220
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 221 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 264
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 265 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 309

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 28  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 78
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 79  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 135
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 136 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 168
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 169 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 229 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 272
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 273 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 317

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 155/341 (45%), Gaps = 39/341 (11%)
Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK--YREAAMIEIEVLQQLA 151
           N++S +++ S +GEG +G V     +   E+VAIK +    K  +    + EI++L+   
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
             +      +Q  + F+  N + I+ E + + L+   R  + +    D ++    Q L  
Sbjct: 68  HENIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQYFIYQTLRA 124
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           +  +H   +IH DLKP N+L+ S+  +KV D+              R+   SA    D  
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFG-----------LARIIDESAA---DNS 170
Query: 272 STTYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
             T ++      V+TR YRAPEV+L    ++   D+WS GCIL EL     +F   +   
Sbjct: 171 EPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH 230
Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIM 389
            L ++  ++G            H++  +R       E   +RE IKS+   P      + 
Sbjct: 231 QLLLIFGIIG----------TPHSDNDLR-----CIESPRAREYIKSLPMYPAAPLEKMF 275
Query: 390 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
             V+    DL   LQ +L +DP  R+TA+EAL HP+    H
Sbjct: 276 PRVNPKGIDL---LQRMLVFDPAKRITAKEALEHPYLQTYH 313

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 153/348 (43%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 73
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++         D V+ +
Sbjct: 74  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFL 130
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 163
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 164 LKILDFGLARHTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 224 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 267
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 268 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 22  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 72
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 73  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 129
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 130 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 162
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 163 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 222
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 223 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 266
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 267 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 311

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 73
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 74  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 163
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 164 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 224 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 267
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 268 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 34  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 84
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 85  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 141
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 142 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 174
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 175 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 234
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 235 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 278
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 279 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 323

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 153/348 (43%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 20  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 70
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++         D V+ +
Sbjct: 71  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFL 127
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 128 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 160
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 161 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 220
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 221 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 264
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 265 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 309

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 73
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 74  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 163
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 164 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 224 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 267
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 268 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 35  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYREL---------R 85
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 86  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 142
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 143 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 175
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 176 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 236 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 279
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 280 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 324

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 153/348 (43%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 21  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 71
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++         D V+ +
Sbjct: 72  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFL 128
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 129 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 161
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 162 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 221
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 222 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 265
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 266 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 310

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 30  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 80
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 81  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 137
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 138 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 170
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 171 LKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 231 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 274
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 275 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 319

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 73
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 74  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 163
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 164 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 224 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 267
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 268 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 25  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 75
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 76  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 132
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 133 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 165
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 166 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 226 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 269
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 270 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 314

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 25  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 75
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 76  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 132
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 133 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 165
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 166 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 226 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 269
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 270 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 314

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 73
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 74  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 163
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 164 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 224 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 267
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 268 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 153/348 (43%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 73
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++         D V+ +
Sbjct: 74  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFL 130
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 163
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 164 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 224 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 267
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 268 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 29  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 79
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 80  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 136
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 137 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 169
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 170 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 230 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 273
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 274 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 318

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 30  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 80
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 81  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 137
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 138 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 170
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 171 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 231 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 274
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 275 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 319

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 155/341 (45%), Gaps = 39/341 (11%)
Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK--YREAAMIEIEVLQQLA 151
           N++S +++ S +GEG +G V     +   E+VAIK +    K  +    + EI++L+   
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
             +      +Q  + F+  N + I+ E + + L+   R  + +    D ++    Q L  
Sbjct: 68  HENIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQYFIYQTLRA 124
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           +  +H   +IH DLKP N+L+ S+  +KV D+              R+   SA    D  
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFG-----------LARIIDESAA---DNS 170
Query: 272 STTYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
             T ++      V+TR YRAPEV+L    ++   D+WS GCIL EL     +F   +   
Sbjct: 171 EPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH 230
Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIM 389
            L ++  ++G            H++  +R       E   +RE IKS+   P      + 
Sbjct: 231 QLLLIFGIIG----------TPHSDNDLR-----CIESPRAREYIKSLPMYPAAPLEKMF 275
Query: 390 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
             V+    DL   LQ +L +DP  R+TA+EAL HP+    H
Sbjct: 276 PRVNPKGIDL---LQRMLVFDPAKRITAKEALEHPYLQTYH 313

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 46  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 96
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 97  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 153
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 154 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 186
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 187 LKILDFGLARHTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 246
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 247 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 290
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 291 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 335

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  + +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 33  RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL---------R 83
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 84  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 140
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 141 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 173
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 174 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 233
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 234 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPK 277
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 278 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 322

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 154/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 29  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 79
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 80  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 136
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 137 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 169
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 170 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 230 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 273
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 274 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 318

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score =  103 bits (256), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 155/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 73
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 74  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+ +     +K+ DY  + HT  + + +        
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGY-------- 182
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
                              V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 183 -------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 224 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 267
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 268 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 158/351 (45%), Gaps = 70/351 (19%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG 157
           R+++    G+GTFG V    ++     VAIK V    ++R     E++++Q LA      
Sbjct: 24  RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNR---ELQIMQDLAVLHHPN 80
Query: 158 NRCVQIRNWF------DYRN-HICIVFEKLGSSLYDFLRKNNYR---SFPIDLVREIARQ 207
              VQ++++F      D R+ ++ +V E +  +L+   R N YR   + P  L++    Q
Sbjct: 81  --IVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCR-NYYRRQVAPPPILIKVFLFQ 137
Query: 208 LLECIAFMH--DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 265
           L+  I  +H   + + H D+KP NVL+  ++                            +
Sbjct: 138 LIRSIGCLHLPSVNVCHRDIKPHNVLVNEAD--------------------------GTL 171
Query: 266 KVIDFGSTTYERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEAL 322
           K+ DFGS     P +  +  + +R+YRAPE+I G   +T   DIWSVGCI  E+  GE +
Sbjct: 172 KLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPI 231
Query: 323 FQTHENLEHLAMMERVLGPLPQHMLKRVD---RHAEKYVRRGRLDWPEGAASRESIKSVM 379
           F+   +   L  + RVLG   + +L++++      + Y  +G + W              
Sbjct: 232 FRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKG-IPW-------------- 276
Query: 380 KLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
                 N+   H    A +   LL  LL+Y P +R+   EAL HP+F   H
Sbjct: 277 -----SNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH 322

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 152/342 (44%), Gaps = 64/342 (18%)
Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIKK--YREAAMIEIEVLQQLA 151
           L   Y   + +G G +G V    D+   E VAIK + R  +   + + A  E+ +L+ + 
Sbjct: 40  LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQ 99
Query: 152 KHDKGG-----NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIAR 206
             +  G          +RN++D+  ++ + F +        L+K     F  + ++ +  
Sbjct: 100 HENVIGLLDVFTPASSLRNFYDF--YLVMPFMQTD------LQKIMGMEFSEEKIQYLVY 151
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L+ + ++H   ++H DLKP N+                            + +   +K
Sbjct: 152 QMLKGLKYIHSAGVVHRDLKPGNL---------------------------AVNEDCELK 184
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQT 325
           ++DFG   +   +    V TR YRAPEVIL  + +    DIWSVGCI+ E+ TG+ LF+ 
Sbjct: 185 ILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 244
Query: 326 HENLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL 384
            + L+ L  + +V G P  + + K  D+ A+ Y                 I+S+ + PR 
Sbjct: 245 KDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSY-----------------IQSLPQTPRK 287
Query: 385 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
                Q    ++     LL+ +L  D   RLTA +AL HPFF
Sbjct: 288 D--FTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 327

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score =  102 bits (253), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 155/348 (44%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL---------R 73
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 74  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+ +     +K+ D+  + HT  + + +        
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGY-------- 182
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
                              V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 183 -------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 224 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 267
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 268 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score =  102 bits (253), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 152/342 (44%), Gaps = 64/342 (18%)
Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIKK--YREAAMIEIEVLQQLA 151
           L   Y   + +G G +G V    D+   E VAIK + R  +   + + A  E+ +L+ + 
Sbjct: 22  LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQ 81
Query: 152 KHDKGG-----NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIAR 206
             +  G          +RN++D+  ++ + F +        L+K     F  + ++ +  
Sbjct: 82  HENVIGLLDVFTPASSLRNFYDF--YLVMPFMQTD------LQKIMGLKFSEEKIQYLVY 133
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L+ + ++H   ++H DLKP N+                            + +   +K
Sbjct: 134 QMLKGLKYIHSAGVVHRDLKPGNL---------------------------AVNEDCELK 166
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQT 325
           ++DFG   +   +    V TR YRAPEVIL  + +    DIWSVGCI+ E+ TG+ LF+ 
Sbjct: 167 ILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 226
Query: 326 HENLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL 384
            + L+ L  + +V G P  + + K  D+ A+ Y                 I+S+ + PR 
Sbjct: 227 KDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSY-----------------IQSLPQTPRK 269
Query: 385 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
                Q    ++     LL+ +L  D   RLTA +AL HPFF
Sbjct: 270 D--FTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 309

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score =  102 bits (253), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 147/343 (42%), Gaps = 59/343 (17%)
Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLA 151
           ++  RY     +GEG +G V   +D  RK  VAIK +     + Y +  + EI++L +  
Sbjct: 40  DVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFR 99
Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
             +  G R +   +  +    + IV + + + LY  L+     +   D +     Q+L  
Sbjct: 100 HENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSN---DHICYFLYQILRG 156
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           + ++H   ++H DLKP N+L+ ++                             +K+ DFG
Sbjct: 157 LKYIHSANVLHRDLKPSNLLINTT---------------------------CDLKICDFG 189
Query: 272 STTYERPDQNYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQ 324
                 P+ ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F 
Sbjct: 190 LARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 249
Query: 325 THENLEHLAMMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
               L+ L  +  +LG   Q  L   ++  A  Y+        +   S+  +      P+
Sbjct: 250 GKHYLDQLNHILGILGSPSQEDLNCIINMKARNYL--------QSLPSKTKVAWAKLFPK 301
Query: 384 LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
                    D  A D   LL  +L ++P  R+T  EAL HP+ 
Sbjct: 302 --------SDSKALD---LLDRMLTFNPNKRITVEEALAHPYL 333

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score =  101 bits (251), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 153/344 (44%), Gaps = 77/344 (22%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 66  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 115
Query: 165 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 214
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 273
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 176 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 209
Query: 274 --TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                 P+ +YI S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 210 QLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 268
Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 269 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 306
Query: 391 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 432
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 307 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 348

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score =  101 bits (251), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 153/344 (44%), Gaps = 77/344 (22%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 56  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 105
Query: 165 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 214
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 165
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 273
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 166 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 199
Query: 274 --TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                 P+ +YI S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 200 QLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 258
Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 259 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 296
Query: 391 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 432
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 297 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 338

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score =  101 bits (251), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 153/344 (44%), Gaps = 77/344 (22%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 64  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 113
Query: 165 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 214
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 173
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 273
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 174 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 207
Query: 274 --TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                 P+ +YI S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 208 QLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 266
Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 267 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 304
Query: 391 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 432
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 305 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 346

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score =  101 bits (251), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/344 (24%), Positives = 155/344 (45%), Gaps = 72/344 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---------GIKKYREAAMIEIEVLQ 148
           RY+    +GEG F  V +  D+   ++VAIK ++         GI +    A+ EI++LQ
Sbjct: 11  RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINR---TALREIKLLQ 67
Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQL 208
           +L+  +      + + + F ++++I +VF+ + + L   ++ N+    P   ++      
Sbjct: 68  ELSHPN-----IIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTP-SHIKAYMLMT 121
Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
           L+ + ++H   ++H DLKP N+LL                            ++  +K+ 
Sbjct: 122 LQGLEYLHQHWILHRDLKPNNLLL---------------------------DENGVLKLA 154
Query: 269 DFG-STTYERPDQNYI--VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQ 324
           DFG + ++  P++ Y   V TR YRAPE++ G   +    D+W+VGCIL EL        
Sbjct: 155 DFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLP 214
Query: 325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL 384
              +L+ L  +   LG   +                    WP+      S+   +     
Sbjct: 215 GDSDLDQLTRIFETLGTPTEE------------------QWPDMC----SLPDYVTFKSF 252
Query: 385 QNLIMQHVDHSAG-DLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
             + + H+  +AG DL  L+QGL  ++P  R+TA +AL+  +F+
Sbjct: 253 PGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFS 296

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score =  101 bits (251), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 153/344 (44%), Gaps = 77/344 (22%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 156
Query: 165 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 214
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 273
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 217 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 250
Query: 274 --TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                 P+ +YI S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 251 QLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 309
Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 310 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 347
Query: 391 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 432
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 348 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 389

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 153/344 (44%), Gaps = 77/344 (22%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 62  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 111
Query: 165 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 214
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 273
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 172 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 205
Query: 274 --TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                 P+ +YI S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 206 QLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 264
Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 265 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 302
Query: 391 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 432
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 303 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 344

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 153/348 (43%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 73
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 74  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 163
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++ FG   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 164 LKILGFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 224 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 267
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 268 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 153/344 (44%), Gaps = 77/344 (22%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 33  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 82
Query: 165 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 214
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 83  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 142
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 273
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 143 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 176
Query: 274 --TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                 P+ +YI S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 177 QLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 235
Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 236 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 273
Query: 391 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 432
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 274 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 315

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 153/348 (43%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 73
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 74  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 163
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++D G   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 164 LKILDAGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 224 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 267
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 268 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 153/348 (43%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 73
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 74  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 163
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++D G   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 164 LKILDGGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 224 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 267
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 268 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 153/344 (44%), Gaps = 77/344 (22%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 41  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 90
Query: 165 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 214
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 91  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 150
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 273
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 151 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 184
Query: 274 --TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                 P+ +YI S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 185 QLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 243
Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 244 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 281
Query: 391 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 432
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 282 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 323

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 99.8 bits (247), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 153/348 (43%), Gaps = 73/348 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQ 149
           RY+  S +G G +G V   +D +    VA+K        I+   + YRE          +
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL---------R 73
Query: 150 LAKHDKGGNRCVQIRNWFDYR-----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           L KH K  N    +  +   R     N + +V   +G+ L + ++    +    D V+ +
Sbjct: 74  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H   +IH DLKP N+                            + +   
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCE 163
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF 323
           +K++D G   +   +    V+TR YRAPE++L  + +    DIWSVGCI+ EL TG  LF
Sbjct: 164 LKILDRGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
              ++++ L ++ R++G     +LK++                   ++R  I+S+ ++P+
Sbjct: 224 PGTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPK 267
Query: 384 LQNLIMQHVDHSAGDL-THLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +      +V   A  L   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 268 MN---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 312

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 153/344 (44%), Gaps = 77/344 (22%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 77
Query: 165 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 214
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 78  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 273
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 138 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 171
Query: 274 --TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                 P+ +YI S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 172 QLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 231 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 268
Query: 391 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 432
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 269 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 310

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 146/341 (42%), Gaps = 59/341 (17%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDK 155
           RY   S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L      + 
Sbjct: 26  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 156 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            G   +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++
Sbjct: 86  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYI 142
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H   ++H DLKP N+LL ++                           S +K+ DFG    
Sbjct: 143 HSANVLHRDLKPSNLLLNTT---------------------------SDLKICDFGLARV 175
Query: 276 ERPDQNYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN 328
             PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     
Sbjct: 176 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 235
Query: 329 LEHLAMMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           L+ L  +  +LG   Q  L   ++  A  Y+               S+    K+P   N 
Sbjct: 236 LDQLNHILGILGSPSQEDLNCGINLKARNYLL--------------SLPHKNKVP--WNR 279
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           +  + D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 280 LFPNADSKALD---LLDKMLTFNPHKRIEVEQALAHPYLAQ 317

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 99.0 bits (245), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 146/341 (42%), Gaps = 59/341 (17%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDK 155
           RY   S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    + 
Sbjct: 44  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 156 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            G   +      +    + +V   +G+ LY  L+  +  +   D +     Q+L  + ++
Sbjct: 104 IGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSN---DHICYFLYQILRGLKYI 160
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H   ++H DLKP N+LL ++                             +K+ DFG    
Sbjct: 161 HSANVLHRDLKPSNLLLNTT---------------------------XDLKICDFGLARV 193
Query: 276 ERPDQNYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN 328
             PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     
Sbjct: 194 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 253
Query: 329 LEHLAMMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           L+ L  +  +LG   Q  L   ++  A  Y+               S+    K+P   N 
Sbjct: 254 LDQLNHILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNR 297
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           +  + D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 298 LFPNADSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 335

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 98.6 bits (244), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 152/344 (44%), Gaps = 77/344 (22%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG V +    +  E+VAIK V   K ++     E++++++L       + C  +R
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKL-------DHCNIVR 77
Query: 165 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 214
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 78  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 273
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 138 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 171
Query: 274 --TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                 P+ +YI S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 172 QLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 231 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 268
Query: 391 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 432
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 269 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 310

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 54/334 (16%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           Y++  K+G G + +V E  +    E V +KI++ +KK +     EI++L+ L    +GG 
Sbjct: 39  YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKR--EIKILENL----RGGP 92
Query: 159 RCVQIRNWFD--YRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 216
             + + +           +VFE + ++  DF  K  Y++     +R    ++L+ + + H
Sbjct: 93  NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 217 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 276
            + ++H D+KP NV+ +  E+ K                         +++ID+G   + 
Sbjct: 149 SMGIMHRDVKPHNVM-IDHEHRK-------------------------LRLIDWGLAEFY 182
Query: 277 RPDQNYIV--STRHYRAPEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHL 332
            P Q Y V  ++R+++ PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 392
             + +VLG   + +   +D++  +   R           R S K   +    +N   QH+
Sbjct: 243 VRIAKVLGT--EDLYDYIDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL 292
Query: 393 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
              + +    L  LLRYD   RLTAREA+ HP+F
Sbjct: 293 --VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 98.2 bits (243), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 146/341 (42%), Gaps = 59/341 (17%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDK 155
           RY   S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    + 
Sbjct: 28  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENI 87
Query: 156 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            G   +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++
Sbjct: 88  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYI 144
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H   ++H DLKP N+LL ++                             +K+ DFG    
Sbjct: 145 HSANVLHRDLKPSNLLLNTT---------------------------XDLKICDFGLARV 177
Query: 276 ERPDQNYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN 328
             PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     
Sbjct: 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
Query: 329 LEHLAMMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           L+ L  +  +LG   Q  L   ++  A  Y+               S+    K+P   N 
Sbjct: 238 LDQLNHILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNR 281
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           +  + D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 282 LFPNADSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 97.8 bits (242), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 146/341 (42%), Gaps = 59/341 (17%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDK 155
           RY   S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    + 
Sbjct: 24  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 156 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            G   +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++
Sbjct: 84  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYI 140
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H   ++H DLKP N+LL ++                             +K+ DFG    
Sbjct: 141 HSANVLHRDLKPSNLLLNTT---------------------------XDLKIXDFGLARV 173
Query: 276 ERPDQNYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN 328
             PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     
Sbjct: 174 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 233
Query: 329 LEHLAMMERVLGPLPQHMLKR-VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           L+ L  +  +LG   Q  L   ++  A  Y+               S+    K+P   N 
Sbjct: 234 LDQLNHILGILGSPSQEDLNXIINLKARNYLL--------------SLPHKNKVP--WNR 277
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           +  + D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 278 LFPNADSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 315

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 160/350 (45%), Gaps = 78/350 (22%)
Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---RGIKKYREAAMIEIEVLQQLAKH 153
            +Y+    +GEG++G V++C +++   +VAIK        K  ++ AM EI++L+QL +H
Sbjct: 25  EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL-RH 83
Query: 154 DKGGNR---CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIAR---- 206
           +   N    C + + W+       +VFE +  ++ D     +   FP  L  ++ +    
Sbjct: 84  ENLVNLLEVCKKKKRWY-------LVFEFVDHTILD-----DLELFPNGLDYQVVQKYLF 131
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q++  I F H   +IH D+KPEN+L+                            +S  +K
Sbjct: 132 QIINGIGFCHSHNIIHRDIKPENILV---------------------------SQSGVVK 164
Query: 267 VIDFG-STTYERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEAL 322
           + DFG + T   P + Y   V+TR YRAPE+++G + +    D+W++GC++ E+  GE L
Sbjct: 165 LCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPL 224
Query: 323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR---GRLDWPEGAASRESIKSVM 379
           F    +++ L  +   LG L       + RH E + +      +  PE    RE ++   
Sbjct: 225 FPGDSDIDQLYHIMMCLGNL-------IPRHQELFNKNPVFAGVRLPE-IKEREPLER-- 274
Query: 380 KLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
           + P+L  +++            L +  L  DP  R    E L H FF  D
Sbjct: 275 RYPKLSEVVID-----------LAKKCLHIDPDKRPFCAELLHHDFFQMD 313

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 154/342 (45%), Gaps = 73/342 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG V +    +  E+VAIK V   K ++     E++++++L       + C  +R
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKL-------DHCNIVR 77
Query: 165 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 214
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 78  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 273
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 138 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 171
Query: 274 --TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                 P+ +YI S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 172 QLVRGEPNVSYICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
            L  + +VLG   +  ++ ++ +  ++       +P+  A       V + PR       
Sbjct: 231 QLVEIIKVLGTPTREQIREMNPNYTEFA------FPQIKA--HPWTKVFR-PR------- 274
Query: 391 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 432
               +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 275 ----TPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 310

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 146/341 (42%), Gaps = 59/341 (17%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDK 155
           RY   S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    + 
Sbjct: 24  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 156 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            G   +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++
Sbjct: 84  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYI 140
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H   ++H DLKP N+LL ++                             +K+ DFG    
Sbjct: 141 HSANVLHRDLKPSNLLLNTT---------------------------XDLKICDFGLARV 173
Query: 276 ERPDQNYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN 328
             PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     
Sbjct: 174 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 233
Query: 329 LEHLAMMERVLGPLPQHMLKR-VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           L+ L  +  +LG   Q  L   ++  A  Y+               S+    K+P   N 
Sbjct: 234 LDQLNHILGILGSPSQEDLNXIINLKARNYLL--------------SLPHKNKVP--WNR 277
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           +  + D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 278 LFPNADSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 315

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 145/338 (42%), Gaps = 55/338 (16%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIKK--YREAAMIEIEVLQQLAKHDK 155
           Y+    +G G +G V    D      VAIK + R  +   + + A  E+ +L+ +   + 
Sbjct: 27  YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 156 GGNRCVQIRN-WFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            G   V   +   D      +V   +G+ L   ++   +     D ++ +  Q+L+ + +
Sbjct: 87  IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRY 143
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H   +IH DLKP N+ +                            +   +K++DFG   
Sbjct: 144 IHAAGIIHRDLKPGNLAV---------------------------NEDCELKILDFGLAR 176
Query: 275 YERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 333
               +    V TR YRAPEVIL  + +T   DIWSVGCI+ E+ TG+ LF+  ++L+ L 
Sbjct: 177 QADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLK 236
Query: 334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 393
            + +V G  P   ++R+     K   +G                   LP L+      + 
Sbjct: 237 EIMKVTGTPPAEFVQRLQSDEAKNYMKG-------------------LPELEKKDFASIL 277
Query: 394 HSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
            +A  L  +LL+ +L  D   R+TA EAL HP+F   H
Sbjct: 278 TNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 152/344 (44%), Gaps = 77/344 (22%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 62  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 111
Query: 165 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 214
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 273
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 172 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 205
Query: 274 --TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                 P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 206 QLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 264
Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 265 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 302
Query: 391 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 432
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 303 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 344

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 149/344 (43%), Gaps = 79/344 (22%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHDKG 156
           +G G +G V   +D   ++ VA+K        ++   + YRE          +L KH K 
Sbjct: 36  VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYREL---------RLLKHLKH 86
Query: 157 GNRCVQIRNWF-------DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 209
            N  + + + F       D+ + + +V   +G+ L + ++    ++   + V+ +  QLL
Sbjct: 87  EN-VIGLLDVFTPATSIEDF-SEVYLVTTLMGADLNNIVKS---QALSDEHVQFLVYQLL 141
Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
             + ++H   +IH DLKP NV                            + + S ++++D
Sbjct: 142 RGLKYIHSAGIIHRDLKPSNV---------------------------AVNEDSELRILD 174
Query: 270 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 328
           FG       +    V+TR YRAPE++L  + +    DIWSVGCI+ EL  G+ALF   + 
Sbjct: 175 FGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDY 234
Query: 329 LEHLA-MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           ++ L  +ME V  P P+ + K    HA  Y++                     LP +   
Sbjct: 235 IDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ--------------------SLPPMPQK 274
Query: 388 IMQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
            +  +   A  L   LL  +L  D   R++A EAL H +F++ H
Sbjct: 275 DLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYH 318

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 152/344 (44%), Gaps = 77/344 (22%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 40  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 89
Query: 165 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 214
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 90  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 273
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 150 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 183
Query: 274 --TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                 P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 184 QLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 242
Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 243 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 280
Query: 391 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 432
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 281 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 322

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 152/344 (44%), Gaps = 77/344 (22%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 40  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 89
Query: 165 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 214
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 90  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 273
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 150 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 183
Query: 274 --TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                 P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 184 QLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 242
Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 243 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 280
Query: 391 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 432
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 281 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 322

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 146/341 (42%), Gaps = 59/341 (17%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDK 155
           RY   S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    + 
Sbjct: 44  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 156 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            G   +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++
Sbjct: 104 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYI 160
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H   ++H DLKP N+LL ++                             +K+ DFG    
Sbjct: 161 HSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLARV 193
Query: 276 ERPDQNYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN 328
             PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     
Sbjct: 194 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 253
Query: 329 LEHLAMMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           L+ L  +  +LG   Q  L   ++  A  Y+               S+    K+P   N 
Sbjct: 254 LDQLNHILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNR 297
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           +  + D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 298 LFPNADSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 335

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 145/341 (42%), Gaps = 59/341 (17%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDK 155
           RY   S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L      + 
Sbjct: 26  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 156 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            G   +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++
Sbjct: 86  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYI 142
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H   ++H DLKP N+LL ++                             +K+ DFG    
Sbjct: 143 HSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLARV 175
Query: 276 ERPDQNYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN 328
             PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     
Sbjct: 176 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 235
Query: 329 LEHLAMMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           L+ L  +  +LG   Q  L   ++  A  Y+               S+    K+P   N 
Sbjct: 236 LDQLNHILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNR 279
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           +  + D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 280 LFPNADSKALD---LLDKMLTFNPHKRIEVEQALAHPYLAQ 317

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 152/344 (44%), Gaps = 77/344 (22%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 47  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 96
Query: 165 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 214
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 97  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 156
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 273
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 157 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 190
Query: 274 --TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                 P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 191 QLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 249
Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 250 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 287
Query: 391 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 432
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 288 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 329

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 146/341 (42%), Gaps = 59/341 (17%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDK 155
           RY   S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    + 
Sbjct: 26  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 85
Query: 156 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            G   +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++
Sbjct: 86  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYI 142
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H   ++H DLKP N+LL ++                             +K+ DFG    
Sbjct: 143 HSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLARV 175
Query: 276 ERPDQNYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN 328
             PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     
Sbjct: 176 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 235
Query: 329 LEHLAMMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           L+ L  +  +LG   Q  L   ++  A  Y+               S+    K+P   N 
Sbjct: 236 LDQLNHILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNR 279
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           +  + D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 280 LFPNADSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 317

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 152/344 (44%), Gaps = 77/344 (22%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 36  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 85
Query: 165 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 214
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 86  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 145
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 273
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 146 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 179
Query: 274 --TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                 P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 180 QLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 238
Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 239 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 276
Query: 391 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 432
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 277 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 318

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 146/341 (42%), Gaps = 59/341 (17%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDK 155
           RY   S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    + 
Sbjct: 32  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 91
Query: 156 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            G   +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++
Sbjct: 92  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYI 148
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H   ++H DLKP N+LL ++                             +K+ DFG    
Sbjct: 149 HSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLARV 181
Query: 276 ERPDQNYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN 328
             PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     
Sbjct: 182 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 241
Query: 329 LEHLAMMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           L+ L  +  +LG   Q  L   ++  A  Y+               S+    K+P   N 
Sbjct: 242 LDQLNHILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNR 285
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           +  + D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 286 LFPNADSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 323

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 146/341 (42%), Gaps = 59/341 (17%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDK 155
           RY   S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    + 
Sbjct: 24  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 156 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            G   +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++
Sbjct: 84  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYI 140
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H   ++H DLKP N+LL ++                             +K+ DFG    
Sbjct: 141 HSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLARV 173
Query: 276 ERPDQNYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN 328
             PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     
Sbjct: 174 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 233
Query: 329 LEHLAMMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           L+ L  +  +LG   Q  L   ++  A  Y+               S+    K+P   N 
Sbjct: 234 LDQLNHILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNR 277
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           +  + D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 278 LFPNADSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 315

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 146/341 (42%), Gaps = 59/341 (17%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDK 155
           RY   S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    + 
Sbjct: 28  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 156 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            G   +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++
Sbjct: 88  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYI 144
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H   ++H DLKP N+LL ++                             +K+ DFG    
Sbjct: 145 HSANVLHRDLKPSNLLLNTT---------------------------XDLKICDFGLARV 177
Query: 276 ERPDQNYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN 328
             PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     
Sbjct: 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
Query: 329 LEHLAMMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           L+ L  +  +LG   Q  L   ++  A  Y+               S+    K+P   N 
Sbjct: 238 LDQLNHILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNR 281
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           +  + D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 282 LFPNADSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 146/341 (42%), Gaps = 59/341 (17%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDK 155
           RY   S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    + 
Sbjct: 24  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 156 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            G   +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++
Sbjct: 84  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYI 140
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H   ++H DLKP N+LL ++                             +K+ DFG    
Sbjct: 141 HSANVLHRDLKPSNLLLNTT---------------------------XDLKICDFGLARV 173
Query: 276 ERPDQNYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN 328
             PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     
Sbjct: 174 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 233
Query: 329 LEHLAMMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           L+ L  +  +LG   Q  L   ++  A  Y+               S+    K+P   N 
Sbjct: 234 LDQLNHILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNR 277
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           +  + D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 278 LFPNADSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 315

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 146/341 (42%), Gaps = 59/341 (17%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDK 155
           RY   S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    + 
Sbjct: 22  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 156 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            G   +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++
Sbjct: 82  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYI 138
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H   ++H DLKP N+LL ++                             +K+ DFG    
Sbjct: 139 HSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLARV 171
Query: 276 ERPDQNYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN 328
             PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     
Sbjct: 172 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 231
Query: 329 LEHLAMMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           L+ L  +  +LG   Q  L   ++  A  Y+               S+    K+P   N 
Sbjct: 232 LDQLNHILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNR 275
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           +  + D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 276 LFPNADSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 313

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 146/341 (42%), Gaps = 59/341 (17%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDK 155
           RY   S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    + 
Sbjct: 24  RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 156 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            G   +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++
Sbjct: 84  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYI 140
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H   ++H DLKP N+LL ++                             +K+ DFG    
Sbjct: 141 HSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLARV 173
Query: 276 ERPDQNYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN 328
             PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     
Sbjct: 174 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 233
Query: 329 LEHLAMMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           L+ L  +  +LG   Q  L   ++  A  Y+               S+    K+P   N 
Sbjct: 234 LDQLNHILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNR 277
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           +  + D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 278 LFPNADSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 315

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 146/341 (42%), Gaps = 59/341 (17%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDK 155
           RY   S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    + 
Sbjct: 29  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 156 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            G   +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++
Sbjct: 89  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYI 145
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H   ++H DLKP N+LL ++                             +K+ DFG    
Sbjct: 146 HSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLARV 178
Query: 276 ERPDQNYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN 328
             PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     
Sbjct: 179 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 238
Query: 329 LEHLAMMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           L+ L  +  +LG   Q  L   ++  A  Y+               S+    K+P   N 
Sbjct: 239 LDQLNHILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNR 282
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           +  + D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 283 LFPNADSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 320

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 146/341 (42%), Gaps = 59/341 (17%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDK 155
           RY   S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    + 
Sbjct: 30  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 89
Query: 156 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            G   +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++
Sbjct: 90  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYI 146
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H   ++H DLKP N+LL ++                             +K+ DFG    
Sbjct: 147 HSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLARV 179
Query: 276 ERPDQNYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN 328
             PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     
Sbjct: 180 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 239
Query: 329 LEHLAMMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           L+ L  +  +LG   Q  L   ++  A  Y+               S+    K+P   N 
Sbjct: 240 LDQLNHILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNR 283
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           +  + D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 284 LFPNADSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 321

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 146/341 (42%), Gaps = 59/341 (17%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDK 155
           RY   S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    + 
Sbjct: 21  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 80
Query: 156 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            G   +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++
Sbjct: 81  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYI 137
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H   ++H DLKP N+LL ++                             +K+ DFG    
Sbjct: 138 HSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLARV 170
Query: 276 ERPDQNYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN 328
             PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     
Sbjct: 171 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 230
Query: 329 LEHLAMMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           L+ L  +  +LG   Q  L   ++  A  Y+               S+    K+P   N 
Sbjct: 231 LDQLNHILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNR 274
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           +  + D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 275 LFPNADSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 312

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 146/341 (42%), Gaps = 59/341 (17%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDK 155
           RY   S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    + 
Sbjct: 28  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 156 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            G   +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++
Sbjct: 88  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYI 144
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H   ++H DLKP N+LL ++                             +K+ DFG    
Sbjct: 145 HSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLARV 177
Query: 276 ERPDQNYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN 328
             PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     
Sbjct: 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
Query: 329 LEHLAMMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           L+ L  +  +LG   Q  L   ++  A  Y+               S+    K+P   N 
Sbjct: 238 LDQLNHILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNR 281
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           +  + D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 282 LFPNADSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 146/341 (42%), Gaps = 59/341 (17%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDK 155
           RY   S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    + 
Sbjct: 22  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 156 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            G   +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++
Sbjct: 82  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYI 138
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H   ++H DLKP N+LL ++                             +K+ DFG    
Sbjct: 139 HSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLARV 171
Query: 276 ERPDQNYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN 328
             PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     
Sbjct: 172 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 231
Query: 329 LEHLAMMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           L+ L  +  +LG   Q  L   ++  A  Y+               S+    K+P   N 
Sbjct: 232 LDQLNHILGILGSPEQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNR 275
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           +  + D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 276 LFPNADSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 313

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 146/341 (42%), Gaps = 59/341 (17%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDK 155
           RY   S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    + 
Sbjct: 28  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 156 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            G   +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++
Sbjct: 88  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYI 144
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H   ++H DLKP N+LL ++                             +K+ DFG    
Sbjct: 145 HSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLARV 177
Query: 276 ERPDQNYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN 328
             PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     
Sbjct: 178 ADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
Query: 329 LEHLAMMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           L+ L  +  +LG   Q  L   ++  A  Y+               S+    K+P   N 
Sbjct: 238 LDQLNHILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNR 281
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           +  + D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 282 LFPNADSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 146/341 (42%), Gaps = 59/341 (17%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDK 155
           RY   S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    + 
Sbjct: 29  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 156 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            G   +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++
Sbjct: 89  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYI 145
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H   ++H DLKP N+LL ++                             +K+ DFG    
Sbjct: 146 HSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLARV 178
Query: 276 ERPDQNYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN 328
             PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     
Sbjct: 179 ADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 238
Query: 329 LEHLAMMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           L+ L  +  +LG   Q  L   ++  A  Y+               S+    K+P   N 
Sbjct: 239 LDQLNHILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNR 282
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           +  + D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 283 LFPNADSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 320

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 152/344 (44%), Gaps = 77/344 (22%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 32  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 81
Query: 165 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 214
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 82  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 141
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 273
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 142 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 175
Query: 274 --TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                 P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 176 QLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 234
Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 235 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 272
Query: 391 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 432
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 273 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 314

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 152/344 (44%), Gaps = 77/344 (22%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 77
Query: 165 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 214
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 78  LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 273
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 138 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 171
Query: 274 --TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                 P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 172 QLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 231 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 268
Query: 391 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 432
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 269 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 310

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 152/344 (44%), Gaps = 77/344 (22%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 77
Query: 165 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 214
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 78  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 273
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 138 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 171
Query: 274 --TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                 P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 172 QLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 231 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 268
Query: 391 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 432
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 269 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 310

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 152/344 (44%), Gaps = 77/344 (22%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 77
Query: 165 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 214
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 78  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 273
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 138 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 171
Query: 274 --TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                 P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 172 QLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 231 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 268
Query: 391 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 432
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 269 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 310

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 152/344 (44%), Gaps = 77/344 (22%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG V +    +  E+VAIK V   K+++     E++++++L       + C  +R
Sbjct: 29  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-------DHCNIVR 78
Query: 165 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 214
             +F Y +       ++ +V + +  ++Y   R      ++ P+  V+    QL   +A+
Sbjct: 79  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 138
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 273
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 139 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 172
Query: 274 --TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                 P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 173 QLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 231
Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
            L  + +VLG   +  ++ ++ +  ++                      K P+++     
Sbjct: 232 QLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFPQIKAHPWT 269
Query: 391 HV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 432
            V    +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 270 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 311

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/372 (25%), Positives = 161/372 (43%), Gaps = 62/372 (16%)
Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAI-KIVRGIKKYREAAMI--EIEVLQQLA 151
           +  RY+I   +G G++G V E +D+  K +VAI KI+R  +   +   I  EI +L +L 
Sbjct: 51  IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLN 110
Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDL-VREIARQLLE 210
                    + I    +  + + +V E   S      R   Y +   +L ++ +   LL 
Sbjct: 111 HDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLT---ELHIKTLLYNLLV 167
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY--KSSLHTPKD-SSYFKRMPKSSAIKV 267
            + ++H   ++H DLKP N L+     +KV D+    ++  P++ +S     P+   + +
Sbjct: 168 GVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNL 227
Query: 268 IDFGSTTYERPDQNYIVSTRHYRAPEVI-LGLGWTYPCDIWSVGCILVELCT-------- 318
           + F  T   +      V TR YRAPE+I L   +T   D+WS+GCI  EL          
Sbjct: 228 VTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAY 287
Query: 319 -----------------------GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRH-A 354
                                   +  F T  N + L ++  +LG   +  ++ +++  A
Sbjct: 288 HADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDA 347
Query: 355 EKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR 414
           ++Y+R     +P+    RE      + P            S+ D  HLL+ +L ++P  R
Sbjct: 348 KRYIRI----FPK----REGTDLAERFPA-----------SSADAIHLLKRMLVFNPNKR 388
Query: 415 LTAREALRHPFF 426
           +T  E L HPFF
Sbjct: 389 ITINECLAHPFF 400

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 149/344 (43%), Gaps = 79/344 (22%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHDKG 156
           +G G +G V   +D   ++ VA+K        ++   + YRE          +L KH K 
Sbjct: 36  VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYREL---------RLLKHLKH 86
Query: 157 GNRCVQIRNWF-------DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 209
            N  + + + F       D+ + + +V   +G+ L + ++    ++   + V+ +  QLL
Sbjct: 87  EN-VIGLLDVFTPATSIEDF-SEVYLVTTLMGADLNNIVK---CQALSDEHVQFLVYQLL 141
Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
             + ++H   +IH DLKP NV                            + + S ++++D
Sbjct: 142 RGLKYIHSAGIIHRDLKPSNV---------------------------AVNEDSELRILD 174
Query: 270 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 328
           FG       +    V+TR YRAPE++L  + +    DIWSVGCI+ EL  G+ALF   + 
Sbjct: 175 FGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDY 234
Query: 329 LEHLA-MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           ++ L  +ME V  P P+ + K    HA  Y++                     LP +   
Sbjct: 235 IDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ--------------------SLPPMPQK 274
Query: 388 IMQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
            +  +   A  L   LL  +L  D   R++A EAL H +F++ H
Sbjct: 275 DLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYH 318

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 146/341 (42%), Gaps = 59/341 (17%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDK 155
           RY   S +GEG +G V   +D   K  VAIK +     + Y +  + EI++L +    + 
Sbjct: 28  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 156 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            G   +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++
Sbjct: 88  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSN---DHICYFLYQILRGLKYI 144
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H   ++H DLKP N+LL ++                             +K+ DFG    
Sbjct: 145 HSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLARV 177
Query: 276 ERPDQNYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN 328
             PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     
Sbjct: 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
Query: 329 LEHLAMMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           L+ L  +  +LG   Q  L   ++  A  Y+               S+    K+P   N 
Sbjct: 238 LDQLNHILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNR 281
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           +  + D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 282 LFPNADSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 146/341 (42%), Gaps = 59/341 (17%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDK 155
           RY   S +GEG +G V   +D   K  VAI+ +     + Y +  + EI++L +    + 
Sbjct: 28  RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 156 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            G   +      +    + IV + + + LY  L+  +  +   D +     Q+L  + ++
Sbjct: 88  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFLYQILRGLKYI 144
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H   ++H DLKP N+LL ++                             +K+ DFG    
Sbjct: 145 HSANVLHRDLKPSNLLLNTT---------------------------CDLKICDFGLARV 177
Query: 276 ERPDQNYI------VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN 328
             PD ++       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     
Sbjct: 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
Query: 329 LEHLAMMERVLGPLPQHMLK-RVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           L+ L  +  +LG   Q  L   ++  A  Y+               S+    K+P   N 
Sbjct: 238 LDQLNHILGILGSPSQEDLNCIINLKARNYLL--------------SLPHKNKVP--WNR 281
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           +  + D  A D   LL  +L ++P  R+   +AL HP+  +
Sbjct: 282 LFPNADSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQ 319

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 154/342 (45%), Gaps = 73/342 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG V +    +  E+VAIK V   K ++     E++++++L       + C  +R
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKL-------DHCNIVR 77
Query: 165 -NWFDYRN-------HICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLECIAF 214
             +F Y +       ++ +V + + +++Y   R      ++ P+  V+    QL   +A+
Sbjct: 78  LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST- 273
           +H   + H D+KP+N+LL                           P ++ +K+ DFGS  
Sbjct: 138 IHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCDFGSAK 171
Query: 274 --TYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                 P+ + I S R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F     ++
Sbjct: 172 QLVRGEPNVSXICS-RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
            L  + +VLG   +  ++ ++ +  ++       +P+  A       V + PR       
Sbjct: 231 QLVEIIKVLGTPTREQIREMNPNYTEFA------FPQIKA--HPWTKVFR-PR------- 274
Query: 391 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 432
               +  +   L   LL Y PT RLT  EA  H FF  D LR
Sbjct: 275 ----TPPEAIALCSRLLEYTPTARLTPLEACAHSFF--DELR 310

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 95.1 bits (235), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 154/339 (45%), Gaps = 84/339 (24%)
Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKY--REAAMIEIEVLQQL 150
            + RYK    +G+G+FG+V+ C D+   +  A+K++  R +K+   +E+ + E+++L+QL
Sbjct: 48  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 151 AKHDKGGNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLL 209
              +      +++  +F+ + +  +V E   G  L+D +     R   +D  R I RQ+L
Sbjct: 108 DHPN-----IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAAR-IIRQVL 160
Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
             I +MH   ++H DLKPEN+LL S                          K + I++ID
Sbjct: 161 SGITYMHKNKIVHRDLKPENLLLESK------------------------SKDANIRIID 196
Query: 270 FGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 327
           FG +T+    +     + T +Y APEV+ G  +   CD+WS G IL  L +G   F    
Sbjct: 197 FGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFN--- 252
Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
                       G     +LK+V++                       K   +LP+ +  
Sbjct: 253 ------------GANEYDILKKVEKG----------------------KYTFELPQWKK- 277
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
               V  SA D   L++ +L Y P+ R++AR+AL H + 
Sbjct: 278 ----VSESAKD---LIRKMLTYVPSMRISARDALDHEWI 309

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 95.1 bits (235), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 154/339 (45%), Gaps = 84/339 (24%)
Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKY--REAAMIEIEVLQQL 150
            + RYK    +G+G+FG+V+ C D+   +  A+K++  R +K+   +E+ + E+++L+QL
Sbjct: 47  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 151 AKHDKGGNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLL 209
              +      +++  +F+ + +  +V E   G  L+D +     R   +D  R I RQ+L
Sbjct: 107 DHPN-----IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAAR-IIRQVL 159
Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
             I +MH   ++H DLKPEN+LL S                          K + I++ID
Sbjct: 160 SGITYMHKNKIVHRDLKPENLLLESK------------------------SKDANIRIID 195
Query: 270 FGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 327
           FG +T+    +     + T +Y APEV+ G  +   CD+WS G IL  L +G   F    
Sbjct: 196 FGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFN--- 251
Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
                       G     +LK+V++                       K   +LP+ +  
Sbjct: 252 ------------GANEYDILKKVEKG----------------------KYTFELPQWKK- 276
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
               V  SA D   L++ +L Y P+ R++AR+AL H + 
Sbjct: 277 ----VSESAKD---LIRKMLTYVPSMRISARDALDHEWI 308

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 94.7 bits (234), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 155/342 (45%), Gaps = 61/342 (17%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVLQQLAKH 153
           RY+  +K+GEGT+G+V +  D    E VAIK +R ++   E     A+ E+ +L++L   
Sbjct: 35  RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIR-LEHEEEGVPGTAIREVSLLKELQHR 93
Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
           +      +++++   + + + ++FE   + L  ++ KN   S  + +++    QL+  + 
Sbjct: 94  N-----IIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVS--MRVIKSFLYQLINGVN 146
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-S 272
           F H    +H DLKP+N+LL  S+  + P                       +K+ DFG +
Sbjct: 147 FCHSRRCLHRDLKPQNLLLSVSDASETP----------------------VLKIGDFGLA 184
Query: 273 TTYERPDQNYI--VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENL 329
             +  P + +   + T  YR PE++LG   ++   DIWS+ CI  E+     LF     +
Sbjct: 185 RAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI 244
Query: 330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM 389
           + L  +  VLG LP                     WP   A  +  +S    P+ +   +
Sbjct: 245 DQLFKIFEVLG-LPDDT-----------------TWPGVTALPDWKQS---FPKFRGKTL 283
Query: 390 QHV--DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
           + V       +   LL  +L  DP  R++A+ AL HP+F+ +
Sbjct: 284 KRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHN 325

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 154/339 (45%), Gaps = 84/339 (24%)
Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKY--REAAMIEIEVLQQL 150
            + RYK    +G+G+FG+V+ C D+   +  A+K++  R +K+   +E+ + E+++L+QL
Sbjct: 24  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 151 AKHDKGGNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLL 209
              +      +++  +F+ + +  +V E   G  L+D +     R   +D  R I RQ+L
Sbjct: 84  DHPN-----IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAAR-IIRQVL 136
Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
             I +MH   ++H DLKPEN+LL S                          K + I++ID
Sbjct: 137 SGITYMHKNKIVHRDLKPENLLLESK------------------------SKDANIRIID 172
Query: 270 FGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 327
           FG +T+    +     + T +Y APEV+ G  +   CD+WS G IL  L +G   F    
Sbjct: 173 FGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFN--- 228
Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
                       G     +LK+V++                       K   +LP+ +  
Sbjct: 229 ------------GANEYDILKKVEKG----------------------KYTFELPQWKK- 253
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
               V  SA D   L++ +L Y P+ R++AR+AL H + 
Sbjct: 254 ----VSESAKD---LIRKMLTYVPSMRISARDALDHEWI 285

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 152/343 (44%), Gaps = 71/343 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHD 154
           +Y+   K+GEGT+G V +  +RE  E+VA+K VR     +    +A+ EI +L++L KH 
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KH- 60
Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                 V++ +       + +VFE     L  +    N    P ++V+    QLL+ + F
Sbjct: 61  ---KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDP-EIVKSFLFQLLKGLGF 116
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   ++H DLKP+N+L+  +  +K+ ++               + ++  I V  + +  
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLANFG--------------LARAFGIPVRCYSAE- 161
Query: 275 YERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCT-GEALFQTHENLEHL 332
                    V T  YR P+V+ G   ++   D+WS GCI  EL   G  LF  ++  + L
Sbjct: 162 ---------VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL 212
Query: 333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 392
             + R+LG   +                    WP          S+ KLP  +   M   
Sbjct: 213 KRIFRLLGTPTEEQ------------------WP----------SMTKLPDYKPYPMYPA 244
Query: 393 DHSAGDLT--------HLLQGLLRYDPTDRLTAREALRHPFFT 427
             S  ++          LLQ LL+ +P  R++A EAL+HP+F+
Sbjct: 245 TTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/336 (26%), Positives = 153/336 (45%), Gaps = 84/336 (25%)
Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKY--REAAMIEIEVLQQL 150
            + RYK    +G+G+FG+V+ C D+   +  A+K++  R +K+   +E+ + E+++L+QL
Sbjct: 30  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 151 AKHDKGGNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLL 209
              +      +++  +F+ + +  +V E   G  L+D +     R   +D  R I RQ+L
Sbjct: 90  DHPN-----IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAAR-IIRQVL 142
Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
             I +MH   ++H DLKPEN+LL S                          K + I++ID
Sbjct: 143 SGITYMHKNKIVHRDLKPENLLLESK------------------------SKDANIRIID 178
Query: 270 FGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 327
           FG +T+    +     + T +Y APEV+ G  +   CD+WS G IL  L +G   F    
Sbjct: 179 FGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFN--- 234
Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
                       G     +LK+V++                       K   +LP+ +  
Sbjct: 235 ------------GANEYDILKKVEKG----------------------KYTFELPQWKK- 259
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 423
               V  SA D   L++ +L Y P+ R++AR+AL H
Sbjct: 260 ----VSESAKD---LIRKMLTYVPSMRISARDALDH 288

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 148/344 (43%), Gaps = 79/344 (22%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIK--------IVRGIKKYREAAMIEIEVLQQLAKHDKG 156
           +G G +G V   +D   ++ VA+K        ++   + YRE          +L KH K 
Sbjct: 28  VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYREL---------RLLKHLKH 78
Query: 157 GNRCVQIRNWF-------DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 209
            N  + + + F       D+ + + +V   +G+ L + ++    ++   + V+ +  QLL
Sbjct: 79  EN-VIGLLDVFTPATSIEDF-SEVYLVTTLMGADLNNIVK---CQALSDEHVQFLVYQLL 133
Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
             + ++H   +IH DLKP NV                            + +   ++++D
Sbjct: 134 RGLKYIHSAGIIHRDLKPSNV---------------------------AVNEDCELRILD 166
Query: 270 FGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN 328
           FG       +    V+TR YRAPE++L  + +    DIWSVGCI+ EL  G+ALF   + 
Sbjct: 167 FGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDY 226
Query: 329 LEHLA-MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           ++ L  +ME V  P P+ + K    HA  Y++                     LP +   
Sbjct: 227 IDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ--------------------SLPPMPQK 266
Query: 388 IMQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
            +  +   A  L   LL  +L  D   R++A EAL H +F++ H
Sbjct: 267 DLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYH 310

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 151/343 (44%), Gaps = 71/343 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHD 154
           +Y+   K+GEGT+G V +  +RE  E+VA+K VR     +    +A+ EI +L++L KH 
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KH- 60
Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                 V++ +       + +VFE     L  +    N    P ++V+    QLL+ + F
Sbjct: 61  ---KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDP-EIVKSFLFQLLKGLGF 116
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   ++H DLKP+N+L+  +  +K+ D+               + ++  I V  + +  
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLADFG--------------LARAFGIPVRCYSAE- 161
Query: 275 YERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGE-ALFQTHENLEHL 332
                    V T  YR P+V+ G   ++   D+WS GCI  EL      LF  ++  + L
Sbjct: 162 ---------VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQL 212
Query: 333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 392
             + R+LG   +                    WP          S+ KLP  +   M   
Sbjct: 213 KRIFRLLGTPTEEQ------------------WP----------SMTKLPDYKPYPMYPA 244
Query: 393 DHSAGDLT--------HLLQGLLRYDPTDRLTAREALRHPFFT 427
             S  ++          LLQ LL+ +P  R++A EAL+HP+F+
Sbjct: 245 TTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 155/352 (44%), Gaps = 55/352 (15%)
Query: 89  FALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIE 145
           F +  ++   Y+I   +G G +G V     R   + VAIK +     +    +  + E++
Sbjct: 47  FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK 106
Query: 146 VLQQLAKHDKGGNRCVQIRNWFDYR--NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVRE 203
           +L+   KHD        +R    Y     + +V + + S L+  +  +  +   ++ VR 
Sbjct: 107 ILKHF-KHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS--QPLTLEHVRY 163
Query: 204 IARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMP 260
              QLL  + +MH   +IH DLKP N+L+  +  +K+ D+   +    +P +  YF    
Sbjct: 164 FLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM--- 220
Query: 261 KSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTG 319
                       T Y        V+TR YRAPE++L L  +T   D+WSVGCI  E+   
Sbjct: 221 ------------TEY--------VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLAR 260
Query: 320 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVM 379
             LF     +  L ++  VLG     +++ V   AE+               R  I+S  
Sbjct: 261 RQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVG--AERV--------------RAYIQS-- 302
Query: 380 KLPRLQNLIMQHVDHSAG-DLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
            LP  Q +  + V   A      LL  +LR++P+ R++A  ALRHPF  + H
Sbjct: 303 -LPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYH 353

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 92.4 bits (228), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 161/357 (45%), Gaps = 65/357 (18%)
Query: 89  FALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIE 145
           F +  ++   Y+I   +G G +G V     R   + VAIK +     +    +  + E++
Sbjct: 46  FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK 105
Query: 146 VLQQLAKHDKGGNRCVQIRN-------WFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPI 198
           +L+   KHD      + I++       + ++++ + +V + + S L+  +  +  +   +
Sbjct: 106 ILKHF-KHDN----IIAIKDILRPTVPYGEFKS-VYVVLDLMESDLHQIIHSS--QPLTL 157
Query: 199 DLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSY 255
           + VR    QLL  + +MH   +IH DLKP N+L+  +  +K+ D+   +    +P +  Y
Sbjct: 158 EHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 217
Query: 256 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILV 314
           F                T Y        V+TR YRAPE++L L  +T   D+WSVGCI  
Sbjct: 218 FM---------------TEY--------VATRWYRAPELMLSLHEYTQAIDLWSVGCIFG 254
Query: 315 ELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRES 374
           E+     LF     +  L ++  VLG     +++ V   AE+               R  
Sbjct: 255 EMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVG--AERV--------------RAY 298
Query: 375 IKSVMKLPRLQNLIMQHVDHSAG-DLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           I+S   LP  Q +  + V   A      LL  +LR++P+ R++A  ALRHPF  + H
Sbjct: 299 IQS---LPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYH 352

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 91.7 bits (226), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 148/341 (43%), Gaps = 83/341 (24%)
Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV-RGIKKYREAAMI--EIEVLQQL 150
               RY I   +G+G+FG+VL+C DR  ++  A+K++ +   K ++ + I  E+E+L++L
Sbjct: 19  TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 151 AKHDKGGNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLL 209
              +      +++    +  +   IV E   G  L+D + K   + F       I +Q+ 
Sbjct: 79  DHPN-----IMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVF 131
Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
             I +MH   ++H DLKPEN+LL S E                        K   IK+ID
Sbjct: 132 SGITYMHKHNIVHRDLKPENILLESKE------------------------KDCDIKIID 167
Query: 270 FG-STTYERPDQ-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 327
           FG ST +++  +    + T +Y APEV+ G  +   CD+WS G IL  L +G   F    
Sbjct: 168 FGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPF---- 222
Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
                       G     +LKRV                      E+ K    LP+ + +
Sbjct: 223 -----------YGKNEYDILKRV----------------------ETGKYAFDLPQWRTI 249
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                   + D   L++ +L + P+ R+TA + L HP+  +
Sbjct: 250 --------SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 91.3 bits (225), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 36/227 (15%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +GEG+F    +C  ++  +  A+KI+   K+       EI  L+    H       V++ 
Sbjct: 19  LGEGSFSICRKCVHKKSNQAFAVKIIS--KRMEANTQKEITALKLCEGHP----NIVKLH 72
Query: 165 NWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHT 223
             F  + H  +V E L G  L++ ++K  +  F       I R+L+  ++ MHD+ ++H 
Sbjct: 73  EVFHDQLHTFLVMELLNGGELFERIKKKKH--FSETEASYIMRKLVSAVSHMHDVGVVHR 130
Query: 224 DLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI 283
           DLKPEN+L          D   +L                 IK+IDFG    + PD   +
Sbjct: 131 DLKPENLLFT--------DENDNLE----------------IKIIDFGFARLKPPDNQPL 166
Query: 284 VS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 327
            +   T HY APE++   G+   CD+WS+G IL  + +G+  FQ+H+
Sbjct: 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHD 213

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 146/341 (42%), Gaps = 83/341 (24%)
Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV-RGIKKYREAAMI--EIEVLQQL 150
               RY I   +G+G+FG+VL+C DR  ++  A+K++ +   K ++ + I  E+E+L++L
Sbjct: 19  TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 151 AKHDKGGNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLL 209
              +      +++    +  +   IV E   G  L+D + K   + F       I +Q+ 
Sbjct: 79  DHPN-----IMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVF 131
Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
             I +MH   ++H DLKPEN+LL S E                        K   IK+ID
Sbjct: 132 SGITYMHKHNIVHRDLKPENILLESKE------------------------KDCDIKIID 167
Query: 270 FGSTTYERPDQNYI--VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 327
           FG +T  + +      + T +Y APEV+ G  +   CD+WS G IL  L +G   F    
Sbjct: 168 FGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPF---- 222
Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
                       G     +LKRV                      E+ K    LP+ + +
Sbjct: 223 -----------YGKNEYDILKRV----------------------ETGKYAFDLPQWRTI 249
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                   + D   L++ +L + P+ R+TA + L HP+  +
Sbjct: 250 --------SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 151/339 (44%), Gaps = 84/339 (24%)
Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKY--REAAMIEIEVLQQL 150
            + RYK    +G+G+FG+V+ C D+   +  A+K++  R +K+   +E+ + E+++L+QL
Sbjct: 24  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 151 AKHDKGGNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLL 209
              +       ++  +F+ + +  +V E   G  L+D +     R   +D  R I RQ+L
Sbjct: 84  DHPN-----IXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAAR-IIRQVL 136
Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
             I + H   ++H DLKPEN+LL S                          K + I++ID
Sbjct: 137 SGITYXHKNKIVHRDLKPENLLLESK------------------------SKDANIRIID 172
Query: 270 FGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 327
           FG +T+    +     + T +Y APEV+ G  +   CD+WS G IL  L +G   F    
Sbjct: 173 FGLSTHFEASKKXKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFN--- 228
Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
                       G     +LK+V++                       K   +LP+    
Sbjct: 229 ------------GANEYDILKKVEKG----------------------KYTFELPQ---- 250
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
             + V  SA D   L++  L Y P+ R++AR+AL H + 
Sbjct: 251 -WKKVSESAKD---LIRKXLTYVPSXRISARDALDHEWI 285

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 146/341 (42%), Gaps = 83/341 (24%)
Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV-RGIKKYREAAMI--EIEVLQQL 150
               RY I   +G+G+FG+VL+C DR  ++  A+K++ +   K ++ + I  E+E+L++L
Sbjct: 19  TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 151 AKHDKGGNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLL 209
              +      +++    +  +   IV E   G  L+D + K   + F       I +Q+ 
Sbjct: 79  DHPN-----IMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVF 131
Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
             I +MH   ++H DLKPEN+LL S E                        K   IK+ID
Sbjct: 132 SGITYMHKHNIVHRDLKPENILLESKE------------------------KDCDIKIID 167
Query: 270 FGSTTYERPDQNYI--VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 327
           FG +T  + +      + T +Y APEV+ G  +   CD+WS G IL  L +G   F    
Sbjct: 168 FGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPF---- 222
Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
                       G     +LKRV                      E+ K    LP+ + +
Sbjct: 223 -----------YGKNEYDILKRV----------------------ETGKYAFDLPQWRTI 249
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                   + D   L++ +L + P+ R+TA + L HP+  +
Sbjct: 250 --------SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 151/354 (42%), Gaps = 89/354 (25%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVLQQLAKH 153
           +Y    K+GEGT+G V +  +    E  A+K +R ++K  E      + EI +L++L KH
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIR-LEKEDEGIPSTTIREISILKEL-KH 59
Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLEC 211
               +  V++ +    +  + +VFE L   L   L   +    S      +    QLL  
Sbjct: 60  ----SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVT---AKSFLLQLLNG 112
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           IA+ HD  ++H DLKP+N+L+                            +   +K+ DFG
Sbjct: 113 IAYCHDRRVLHRDLKPQNLLI---------------------------NREGELKIADFG 145
Query: 272 -STTYERPDQNYI--VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHE 327
            +  +  P + Y   V T  YRAP+V++G   ++   DIWSVGCI  E+  G  LF    
Sbjct: 146 LARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVS 205
Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-- 385
             + L  + R+LG  P                    +WP          +V +LP+    
Sbjct: 206 EADQLMRIFRILGT-PNSK-----------------NWP----------NVTELPKYDPN 237
Query: 386 ---------NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
                       ++ +D S  D   LL  +L+ DP  R+TA++AL H +F  ++
Sbjct: 238 FTVYEPLPWESFLKGLDESGID---LLSKMLKLDPNQRITAKQALEHAYFKENN 288

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 151/354 (42%), Gaps = 89/354 (25%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVLQQLAKH 153
           +Y    K+GEGT+G V +  +    E  A+K +R ++K  E      + EI +L++L KH
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIR-LEKEDEGIPSTTIREISILKEL-KH 59
Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLEC 211
               +  V++ +    +  + +VFE L   L   L   +    S      +    QLL  
Sbjct: 60  ----SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVT---AKSFLLQLLNG 112
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           IA+ HD  ++H DLKP+N+L+                            +   +K+ DFG
Sbjct: 113 IAYCHDRRVLHRDLKPQNLLI---------------------------NREGELKIADFG 145
Query: 272 -STTYERPDQNYI--VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHE 327
            +  +  P + Y   V T  YRAP+V++G   ++   DIWSVGCI  E+  G  LF    
Sbjct: 146 LARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS 205
Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-- 385
             + L  + R+LG  P                    +WP          +V +LP+    
Sbjct: 206 EADQLMRIFRILGT-PNSK-----------------NWP----------NVTELPKYDPN 237
Query: 386 ---------NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
                       ++ +D S  D   LL  +L+ DP  R+TA++AL H +F  ++
Sbjct: 238 FTVYEPLPWESFLKGLDESGID---LLSKMLKLDPNQRITAKQALEHAYFKENN 288

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 142/328 (43%), Gaps = 56/328 (17%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAA----MIEIEVLQQLAKHDKGGNR 159
           K+GEGT+  V +   +    +VA+K +R   ++ E A    + E+ +L+ L KH      
Sbjct: 9   KLGEGTYATVYKGKSKLTDNLVALKEIR--LEHEEGAPCTAIREVSLLKDL-KH----AN 61
Query: 160 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
            V + +       + +VFE L   L  +L         +  V+    QLL  +A+ H   
Sbjct: 62  IVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQK 120
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           ++H DLKP+N+L+     +K+ D+               + ++ +I      + TY+   
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFG--------------LARAKSIP-----TKTYDNE- 160
Query: 280 QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 338
               V T  YR P+++LG   ++   D+W VGCI  E+ TG  LF      E L  + R+
Sbjct: 161 ----VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRI 216
Query: 339 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 398
           LG   +                    WP G  S E  K+          ++ H      D
Sbjct: 217 LGTPTEET------------------WP-GILSNEEFKTYNYPKYRAEALLSHAPRLDSD 257
Query: 399 LTHLLQGLLRYDPTDRLTAREALRHPFF 426
              LL  LL+++  +R++A +A++HPFF
Sbjct: 258 GADLLTKLLQFEGRNRISAEDAMKHPFF 285

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 121/261 (46%), Gaps = 37/261 (14%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 162
           +G G FGQV +C +      +A KI+  RG+K  +E    EI V+ QL   +      +Q
Sbjct: 97  LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKD-KEEVKNEISVMNQLDHAN-----LIQ 150
Query: 163 IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 221
           + + F+ +N I +V E + G  L+D +   +Y    +D +    +Q+ E I  MH + ++
Sbjct: 151 LYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTIL-FMKQICEGIRHMHQMYIL 209
Query: 222 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 281
           H DLKPEN+L V+ +                         +  IK+IDFG     +P + 
Sbjct: 210 HLDLKPENILCVNRD-------------------------AKQIKIIDFGLARRYKPREK 244
Query: 282 YIVS--TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 339
             V+  T  + APEV+     ++P D+WSVG I   L +G + F    + E L  +    
Sbjct: 245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACR 304
Query: 340 GPLPQHMLKRVDRHAEKYVRR 360
             L     + +   A++++ +
Sbjct: 305 WDLEDEEFQDISEEAKEFISK 325

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 92/354 (25%), Positives = 151/354 (42%), Gaps = 89/354 (25%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVLQQLAKH 153
           +Y    K+GEGT+G V +  +    E  A+K +R ++K  E      + EI +L++L KH
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIR-LEKEDEGIPSTTIREISILKEL-KH 59
Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLR--KNNYRSFPIDLVREIARQLLEC 211
               +  V++ +    +  + +VFE L   L   L   +    S      +    QLL  
Sbjct: 60  ----SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVT---AKSFLLQLLNG 112
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           IA+ HD  ++H DLKP+N+L+                            +   +K+ DFG
Sbjct: 113 IAYCHDRRVLHRDLKPQNLLI---------------------------NREGELKIADFG 145
Query: 272 -STTYERPDQNYI--VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHE 327
            +  +  P + Y   + T  YRAP+V++G   ++   DIWSVGCI  E+  G  LF    
Sbjct: 146 LARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS 205
Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-- 385
             + L  + R+LG  P                    +WP          +V +LP+    
Sbjct: 206 EADQLMRIFRILGT-PNSK-----------------NWP----------NVTELPKYDPN 237
Query: 386 ---------NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
                       ++ +D S  D   LL  +L+ DP  R+TA++AL H +F  ++
Sbjct: 238 FTVYEPLPWESFLKGLDESGID---LLSKMLKLDPNQRITAKQALEHAYFKENN 288

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 89.0 bits (219), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 91/354 (25%), Positives = 153/354 (43%), Gaps = 86/354 (24%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMIEIEV 146
           + L  +Y+   K+GEGT+G V +  D + + +VA+K +R      GI      A+ EI +
Sbjct: 17  QGLMEKYQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIP---STAIREISL 72
Query: 147 LQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIAR 206
           L++L   +      V + +       + +VFE +   L   L +N         ++    
Sbjct: 73  LKELHHPN-----IVSLIDVIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLY 126
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           QLL  +A  H   ++H DLKP+N+L+ S                             A+K
Sbjct: 127 QLLRGVAHCHQHRILHRDLKPQNLLINSD---------------------------GALK 159
Query: 267 VIDFG-STTYERPDQNYI--VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEAL 322
           + DFG +  +  P ++Y   V T  YRAP+V++G   ++   DIWS+GCI  E+ TG+ L
Sbjct: 160 LADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPL 219
Query: 323 FQTHENLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL 381
           F    + + L  +  +LG P P+                   +WP+          V +L
Sbjct: 220 FPGVTDDDQLPKIFSILGTPNPR-------------------EWPQ----------VQEL 250
Query: 382 PRLQNLIMQHVDHS---------AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
           P  +    Q  +             +   LL  +L +DP  R++AR+A+ HP+F
Sbjct: 251 PLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 88.6 bits (218), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/354 (25%), Positives = 153/354 (43%), Gaps = 86/354 (24%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMIEIEV 146
           + L  +Y+   K+GEGT+G V +  D + + +VA+K +R      GI      A+ EI +
Sbjct: 17  QGLMEKYQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIP---STAIREISL 72
Query: 147 LQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIAR 206
           L++L   +      V + +       + +VFE +   L   L +N         ++    
Sbjct: 73  LKELHHPN-----IVSLIDVIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLY 126
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           QLL  +A  H   ++H DLKP+N+L+ S                             A+K
Sbjct: 127 QLLRGVAHCHQHRILHRDLKPQNLLINSD---------------------------GALK 159
Query: 267 VIDFG-STTYERPDQNYI--VSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEAL 322
           + DFG +  +  P ++Y   V T  YRAP+V++G   ++   DIWS+GCI  E+ TG+ L
Sbjct: 160 LADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPL 219
Query: 323 FQTHENLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL 381
           F    + + L  +  +LG P P+                   +WP+          V +L
Sbjct: 220 FPGVTDDDQLPKIFSILGTPNPR-------------------EWPQ----------VQEL 250
Query: 382 PRLQNLIMQHVDHS---------AGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
           P  +    Q  +             +   LL  +L +DP  R++AR+A+ HP+F
Sbjct: 251 PLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 154/364 (42%), Gaps = 59/364 (16%)
Query: 79  REDDKDGHYMFALGEN---LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---- 131
           R    +  Y   +G++   +  RY+    +G G  G V   +D   +  VAIK +     
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 132 ----GIKKYREAAMIEIEVLQQLAKHDK--GGNRCVQIRNWFDYRNHICIVFEKLGSSLY 185
                 + YRE       VL ++  H    G       +   +    + IV E + ++L 
Sbjct: 63  NQTHAKRAYREL------VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLS 116
Query: 186 DFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS 245
             ++         + +  +  Q+L  I  +H   +IH DLKP N+++ S   +K+ D+  
Sbjct: 117 QVIQ----MELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG- 171
Query: 246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCD 305
                       R   +S      F  T Y        V TR+YRAPEVILG+G+    D
Sbjct: 172 ----------LARTAGTS------FMMTPY--------VVTRYYRAPEVILGMGYKENVD 207
Query: 306 IWSVGCILVELCTGEALFQTHENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD 364
           IWSVGCI+ E+  G  LF   ++++    ++E++  P P+ M K++      YV     +
Sbjct: 208 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-KKLQPTVRTYVE----N 262
Query: 365 WPEGAA-SRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 423
            P+ A  S E +   +  P       +H    A     LL  +L  D + R++  EAL+H
Sbjct: 263 RPKYAGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 424 PFFT 427
           P+  
Sbjct: 319 PYIN 322

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 154/364 (42%), Gaps = 59/364 (16%)
Query: 79  REDDKDGHYMFALGEN---LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---- 131
           R    +  Y   +G++   +  RY+    +G G  G V   +D   +  VAIK +     
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 132 ----GIKKYREAAMIEIEVLQQLAKHDK--GGNRCVQIRNWFDYRNHICIVFEKLGSSLY 185
                 + YRE       VL ++  H    G       +   +    + IV E + ++L 
Sbjct: 63  NQTHAKRAYREL------VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLS 116
Query: 186 DFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS 245
             ++         + +  +  Q+L  I  +H   +IH DLKP N+++ S   +K+ D+  
Sbjct: 117 QVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG- 171
Query: 246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCD 305
                       R   +S      F  T Y        V TR+YRAPEVILG+G+    D
Sbjct: 172 ----------LARTAGTS------FMMTPY--------VVTRYYRAPEVILGMGYKENVD 207
Query: 306 IWSVGCILVELCTGEALFQTHENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD 364
           IWSVGCI+ E+  G  LF   ++++    ++E++  P P+ M K++      YV     +
Sbjct: 208 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-KKLQPTVRTYVE----N 262
Query: 365 WPEGAA-SRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 423
            P+ A  S E +   +  P       +H    A     LL  +L  D + R++  EAL+H
Sbjct: 263 RPKYAGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 424 PFFT 427
           P+  
Sbjct: 319 PYIN 322

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 84/345 (24%), Positives = 150/345 (43%), Gaps = 53/345 (15%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVLQQLA 151
            S+Y+  +K+G+GTFG+V +   R+  + VA+K V  ++  +E     A+ EI++LQ L 
Sbjct: 17  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVL-MENEKEGFPITALREIKILQ-LL 74
Query: 152 KHDKGGNRCVQIRN----WFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQ 207
           KH+   N     R     +   +  I +VF+     L   L  N    F +  ++ + + 
Sbjct: 75  KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQM 133
Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           LL  + ++H   ++H D+K  NVL+     +K+ D+                      + 
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADF-------------------GLARA 174
Query: 268 IDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTH 326
                 +      N +V T  YR PE++LG   +  P D+W  GCI+ E+ T   + Q +
Sbjct: 175 FSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 233
Query: 327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAAS--RESIKSVMKLPRL 384
                LA++ ++ G +   +   VD     Y    +L+  +G     ++ +K+ ++ P  
Sbjct: 234 TEQHQLALISQLCGSITPEVWPNVD----NYELYEKLELVKGQKRKVKDRLKAYVRDPYA 289
Query: 385 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
            +LI                 LL  DP  R+ + +AL H FF  D
Sbjct: 290 LDLI---------------DKLLVLDPAQRIDSDDALNHDFFWSD 319

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 85.5 bits (210), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 152/348 (43%), Gaps = 83/348 (23%)
Query: 85  GHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMI 142
           G ++ +   +L+  Y+   K+G G +G+VL C D+      AIKI+R   +     + ++
Sbjct: 25  GMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLL 84
Query: 143 EIEVLQQLAKHDKGGNRCVQIRNWF-DYRNHICIVFEKLGSSLYD-FLRKNNYRSFPIDL 200
           E   + +L  H       +++ ++F D RN+  ++    G  L+D  + +  +      +
Sbjct: 85  EEVAVLKLLDHP----NIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV 140
Query: 201 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 260
              I +Q+L  + ++H   ++H DLKPEN+LL S E                        
Sbjct: 141 ---IIKQVLSGVTYLHKHNIVHRDLKPENLLLESKE------------------------ 173
Query: 261 KSSAIKVIDFG-STTYERPDQ-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
           K + IK++DFG S  +E   +    + T +Y APEV L   +   CD+WS+G IL  L  
Sbjct: 174 KDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEV-LRKKYDEKCDVWSIGVILFILLA 232
Query: 319 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSV 378
           G   F                G   Q +L++V++   KY      D PE           
Sbjct: 233 GYPPFG---------------GQTDQEILRKVEKG--KYT----FDSPE----------- 260
Query: 379 MKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
                      ++V   A D   L++ +L++D   R++A++AL HP+ 
Sbjct: 261 ----------WKNVSEGAKD---LIKQMLQFDSQRRISAQQALEHPWI 295

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 85.5 bits (210), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 145/365 (39%), Gaps = 93/365 (25%)
Query: 85  GHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREA- 139
           G +M    + L   Y +   +G G  G+V   ++R+  + VAIKI+      I   REA 
Sbjct: 4   GSHMSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREAD 63
Query: 140 ----AMIEIEVLQQLAKHDKGGNRCV-QIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYR 194
                  EIE+L++L       + C+ +I+N+FD  ++  ++    G  L+D +  N  +
Sbjct: 64  PALNVETEIEILKKL------NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--K 115
Query: 195 SFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS 254
                  +    Q+L  + ++H+  +IH DLKPENVLL S E                  
Sbjct: 116 RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE------------------ 157
Query: 255 YFKRMPKSSAIKVIDFGSTTY--ERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSV 309
                 +   IK+ DFG +    E      +  T  Y APEV++ +   G+    D WS+
Sbjct: 158 ------EDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 211
Query: 310 GCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW-PEG 368
           G IL    +G   F  H                      R     +  +  G+ ++ PE 
Sbjct: 212 GVILFICLSGYPPFSEH----------------------RTQVSLKDQITSGKYNFIPE- 248
Query: 369 AASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                              +   V   A D   L++ LL  DP  R T  EALRHP+   
Sbjct: 249 -------------------VWAEVSEKALD---LVKKLLVVDPKARFTTEEALRHPWLQD 286
Query: 429 DHLRR 433
           + ++R
Sbjct: 287 EDMKR 291

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 85.1 bits (209), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 142/346 (41%), Gaps = 90/346 (26%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREAAMIEIEVLQ 148
           + L+ RY+   K+G G +G+VL C D+      AIKI++           A + E+ VL+
Sbjct: 17  QGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 76
Query: 149 QLAKHDKGGNRCVQIRNWF-DYRNHICIVFEKLGSSLYD--FLRKNNYRSFPIDLVREIA 205
           QL   +      +++  +F D RN+  ++    G  L+D   LR+     F       I 
Sbjct: 77  QLDHPN-----IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK----FSEVDAAVIM 127
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLLVSSE---YIKVPDYKSSLHTPKDSSYFKRMPKS 262
           +Q+L    ++H   ++H DLKPEN+LL S      IK+ D+  S H              
Sbjct: 128 KQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAH-------------- 173
Query: 263 SAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL 322
                 + G    ER      + T +Y APEV L   +   CD+WS G IL  L  G   
Sbjct: 174 -----FEVGGKMKER------LGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPP 221
Query: 323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP 382
           F                G   Q +LKRV++       +   D P+     +  K ++KL 
Sbjct: 222 FG---------------GQTDQEILKRVEKG------KFSFDPPDWTQVSDEAKQLVKL- 259
Query: 383 RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                                  +L Y+P+ R++A EAL HP+  +
Sbjct: 260 -----------------------MLTYEPSKRISAEEALNHPWIVK 282

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 85.1 bits (209), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 153/364 (42%), Gaps = 59/364 (16%)
Query: 79  REDDKDGHYMFALGEN---LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---- 131
           R    +  Y   +G++   +  RY+    +G G  G V   +D   +  VAIK +     
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 132 ----GIKKYREAAMIEIEVLQQLAKHDK--GGNRCVQIRNWFDYRNHICIVFEKLGSSLY 185
                 + YRE       VL +   H    G       +   +    + IV E + ++L 
Sbjct: 63  NQTHAKRAYREL------VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLS 116
Query: 186 DFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS 245
             ++         + +  +  Q+L  I  +H   +IH DLKP N+++ S   +K+ D+  
Sbjct: 117 QVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG- 171
Query: 246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCD 305
                       R   +S      F  T Y        V TR+YRAPEVILG+G+    D
Sbjct: 172 ----------LARTAGTS------FMMTPY--------VVTRYYRAPEVILGMGYKENVD 207
Query: 306 IWSVGCILVELCTGEALFQTHENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD 364
           IWSVGCI+ E+  G  LF   ++++    ++E++  P P+ M K++      YV     +
Sbjct: 208 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-KKLQPTVRTYVE----N 262
Query: 365 WPEGAA-SRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 423
            P+ A  S E +   +  P       +H    A     LL  +L  D + R++  EAL+H
Sbjct: 263 RPKYAGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 424 PFFT 427
           P+  
Sbjct: 319 PYIN 322

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 84.7 bits (208), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 84/345 (24%), Positives = 151/345 (43%), Gaps = 53/345 (15%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVLQQLA 151
            S+Y+  +K+G+GTFG+V +   R+  + VA+K V  ++  +E     A+ EI++LQ L 
Sbjct: 17  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVL-MENEKEGFPITALREIKILQ-LL 74
Query: 152 KHDKGGNRCVQIRN----WFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQ 207
           KH+   N     R     +   +  I +VF+     L   L  N    F +  ++ + + 
Sbjct: 75  KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQM 133
Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           LL  + ++H   ++H D+K  NVL+     +K+ D+  +                   + 
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA-------------------RA 174
Query: 268 IDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTH 326
                 +      N +V T  YR PE++LG   +  P D+W  GCI+ E+ T   + Q +
Sbjct: 175 FSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 233
Query: 327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAAS--RESIKSVMKLPRL 384
                LA++ ++ G +   +   VD     Y    +L+  +G     ++ +K+ ++ P  
Sbjct: 234 TEQHQLALISQLCGSITPEVWPNVD----NYELYEKLELVKGQKRKVKDRLKAYVRDPYA 289
Query: 385 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
            +LI                 LL  DP  R+ + +AL H FF  D
Sbjct: 290 LDLI---------------DKLLVLDPAQRIDSDDALNHDFFWSD 319

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 84.7 bits (208), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 154/364 (42%), Gaps = 59/364 (16%)
Query: 79  REDDKDGHYMFALGEN---LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---- 131
           R    +  Y   +G++   +  RY+    +G G  G V+  +D   +  VAIK +     
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQ 62
Query: 132 ----GIKKYREAAMIEIEVLQQLAKHDK--GGNRCVQIRNWFDYRNHICIVFEKLGSSLY 185
                 + YRE       VL ++  H    G       +   +    + IV E + ++L 
Sbjct: 63  NQTHAKRAYREL------VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLS 116
Query: 186 DFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS 245
             ++         + +  +  Q+L  I  +H   +IH DLKP N+++ S   +K+ D+  
Sbjct: 117 QVIQ----MELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG- 171
Query: 246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCD 305
                       R   +S      F  T Y        V TR+YRAPEVILG+G+    D
Sbjct: 172 ----------LARTAGTS------FMMTPY--------VVTRYYRAPEVILGMGYKENVD 207
Query: 306 IWSVGCILVELCTGEALFQTHENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD 364
           IWSVG I+ E+  G  LF   ++++    ++E++  P P+ M K++      YV     +
Sbjct: 208 IWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-KKLQPTVRTYVE----N 262
Query: 365 WPEGAA-SRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 423
            P+ A  S E +   +  P       +H    A     LL  +L  D + R++  EAL+H
Sbjct: 263 RPKYAGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 424 PFFT 427
           P+  
Sbjct: 319 PYIN 322

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 149/344 (43%), Gaps = 51/344 (14%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---RGIKKYREAAMIEIEVLQQLAK 152
            S+Y+  +K+G+GTFG+V +   R+  + VA+K V      + +   A+ EI++LQ L K
Sbjct: 16  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQ-LLK 74
Query: 153 HDKGGNRCVQIRN----WFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQL 208
           H+   N     R     +   +  I +VF+     L   L  N    F +  ++ + + L
Sbjct: 75  HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQML 133
Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
           L  + ++H   ++H D+K  NVL+     +K+ D+  +                   +  
Sbjct: 134 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA-------------------RAF 174
Query: 269 DFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE 327
                +      N +V T  YR PE++LG   +  P D+W  GCI+ E+ T   + Q + 
Sbjct: 175 SLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 233
Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAAS--RESIKSVMKLPRLQ 385
               LA++ ++ G +   +   VD     Y    +L+  +G     ++ +K+ ++ P   
Sbjct: 234 EQHQLALISQLCGSITPEVWPNVD----NYELYEKLELVKGQKRKVKDRLKAYVRDPYAL 289
Query: 386 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
           +LI                 LL  DP  R+ + +AL H FF  D
Sbjct: 290 DLI---------------DKLLVLDPAQRIDSDDALNHDFFWSD 318

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 141/345 (40%), Gaps = 90/345 (26%)
Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREAAMIEIEVLQQ 149
            L+ RY+   K+G G +G+VL C D+      AIKI++           A + E+ VL+Q
Sbjct: 1   GLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 60
Query: 150 LAKHDKGGNRCVQIRNWF-DYRNHICIVFEKLGSSLYD--FLRKNNYRSFPIDLVREIAR 206
           L   +      +++  +F D RN+  ++    G  L+D   LR    + F       I +
Sbjct: 61  LDHPN-----IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILR----QKFSEVDAAVIMK 111
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSE---YIKVPDYKSSLHTPKDSSYFKRMPKSS 263
           Q+L    ++H   ++H DLKPEN+LL S      IK+ D+  S H               
Sbjct: 112 QVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAH--------------- 156
Query: 264 AIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 323
                + G    ER      + T +Y APEV L   +   CD+WS G IL  L  G   F
Sbjct: 157 ----FEVGGKMKER------LGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPF 205
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
                           G   Q +LKRV++       +   D P+     +  K ++KL  
Sbjct: 206 G---------------GQTDQEILKRVEKG------KFSFDPPDWTQVSDEAKQLVKL-- 242
Query: 384 LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                                 +L Y+P+ R++A EAL HP+  +
Sbjct: 243 ----------------------MLTYEPSKRISAEEALNHPWIVK 265

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/345 (24%), Positives = 151/345 (43%), Gaps = 53/345 (15%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVLQQLA 151
            S+Y+  +K+G+GTFG+V +   R+  + VA+K V  ++  +E     A+ EI++LQ L 
Sbjct: 17  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVL-MENEKEGFPITALREIKILQ-LL 74
Query: 152 KHDKGGNRCVQIRN----WFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQ 207
           KH+   N     R     +   +  I +VF+     L   L  N    F +  ++ + + 
Sbjct: 75  KHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQM 133
Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           LL  + ++H   ++H D+K  NVL+     +K+ D+  +                   + 
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA-------------------RA 174
Query: 268 IDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTH 326
                 +      N +V T  YR PE++LG   +  P D+W  GCI+ E+ T   + Q +
Sbjct: 175 FSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 233
Query: 327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAAS--RESIKSVMKLPRL 384
                LA++ ++ G +   +   VD     Y    +L+  +G     ++ +K+ ++ P  
Sbjct: 234 TEQHQLALISQLCGSITPEVWPNVD----NYELYEKLELVKGQKRKVKDRLKAYVRDPYA 289
Query: 385 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
            +LI                 LL  DP  R+ + +AL H FF  D
Sbjct: 290 LDLI---------------DKLLVLDPAQRIDSDDALNHDFFWSD 319

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 101/221 (45%), Gaps = 32/221 (14%)
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+               + ++++  
Sbjct: 132 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG--------------LARTAST- 176
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
             +F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ EL  G  +FQ  
Sbjct: 177 --NFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 226
Query: 327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 386
           ++++    +   LG      +  +      YV   R  +P G A  E     +     + 
Sbjct: 227 DHIDQWNKVIEQLGTPSAEFMAALQPTVRNYV-ENRPAYP-GIAFEELFPDWIFPSESER 284
Query: 387 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
             ++           LL  +L  DP  R++  EALRHP+ T
Sbjct: 285 DKIK-----TSQARDLLSKMLVIDPDKRISVDEALRHPYIT 320

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 134 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-----------LARTAGTS--- 179
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 180 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 327 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 384
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 275
Query: 385 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
             +L     +H+   A     LL  +L  DP  R++  +AL+HP+  
Sbjct: 276 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 134 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-----------LARTAGTS--- 179
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 180 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 327 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 384
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 275
Query: 385 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
             +L     +H+   A     LL  +L  DP  R++  +AL+HP+  
Sbjct: 276 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 127 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-----------LARTAGTS--- 172
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 173 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221
Query: 327 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 384
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 222 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 268
Query: 385 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
             +L     +H+   A     LL  +L  DP  R++  +AL+HP+  
Sbjct: 269 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 99/229 (43%), Gaps = 48/229 (20%)
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+  +                    
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----------------RTA 176
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
             +F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ EL  G  +FQ  
Sbjct: 177 CTNFMMTPY--------VVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGT 228
Query: 327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVR--------RGRLDWPEGAASRESIKSV 378
           ++++    +   LG      +  +      YV         +    +P+     ES +  
Sbjct: 229 DHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDK 288
Query: 379 MKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
           +K  + ++               LL  +L  DP  R++  EALRHP+ T
Sbjct: 289 IKTSQARD---------------LLSKMLVIDPDKRISVDEALRHPYIT 322

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 105/223 (47%), Gaps = 36/223 (16%)
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 180
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+  G  LF   
Sbjct: 181 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 229
Query: 327 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRL 384
           ++++    ++E++  P P+ M K++      YV     + P+ A  S E +   +  P  
Sbjct: 230 DHIDQWNKVIEQLGTPCPEFM-KKLQPTVRTYVE----NRPKYAGYSFEKLFPDVLFPAD 284
Query: 385 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
                +H    A     LL  +L  D + R++  EAL+HP+  
Sbjct: 285 S----EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 323

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 153/364 (42%), Gaps = 59/364 (16%)
Query: 79  REDDKDGHYMFALGEN---LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---- 131
           R    +  Y   +G++   +  RY+    +G G  G V   +D   +  VAIK +     
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 132 ----GIKKYREAAMIEIEVLQQLAKHDK--GGNRCVQIRNWFDYRNHICIVFEKLGSSLY 185
                 + YRE       VL +   H    G       +   +    + IV E + ++L 
Sbjct: 63  NQTHAKRAYREL------VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 116
Query: 186 DFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS 245
             ++         + +  +  Q+L  I  +H   +IH DLKP N+++ S   +K+ D+  
Sbjct: 117 QVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG- 171
Query: 246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCD 305
                       R   +S      F  T Y        V TR+YRAPEVILG+G+    D
Sbjct: 172 ----------LARTAGTS------FMMTPY--------VVTRYYRAPEVILGMGYKENVD 207
Query: 306 IWSVGCILVELCTGEALFQTHENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD 364
           IWSVGCI+ E+  G  LF   ++++    ++E++  P P+ M K++      YV     +
Sbjct: 208 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM-KKLQPTVRTYVE----N 262
Query: 365 WPEGAA-SRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 423
            P+ A  S E +   +  P       +H    A     LL  +L  D + R++  EAL+H
Sbjct: 263 RPKYAGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 424 PFFT 427
           P+  
Sbjct: 319 PYIN 322

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 153/364 (42%), Gaps = 59/364 (16%)
Query: 79  REDDKDGHYMFALGEN---LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---- 131
           R    +  Y   +G++   +  RY+    +G G  G V   +D   +  VAIK +     
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 132 ----GIKKYREAAMIEIEVLQQLAKHDK--GGNRCVQIRNWFDYRNHICIVFEKLGSSLY 185
                 + YRE       VL +   H    G       +   +    + IV E + ++L 
Sbjct: 63  NQTHAKRAYREL------VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLS 116
Query: 186 DFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS 245
             ++         + +  +  Q+L  I  +H   +IH DLKP N+++ S   +K+ D+  
Sbjct: 117 QVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG- 171
Query: 246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCD 305
                       R   +S      F  T Y        V TR+YRAPEVILG+G+    D
Sbjct: 172 ----------LARTAGTS------FMMTPY--------VVTRYYRAPEVILGMGYKENVD 207
Query: 306 IWSVGCILVELCTGEALFQTHENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD 364
           IWSVGCI+ E+  G  LF   ++++    ++E++  P P+ M K++      YV     +
Sbjct: 208 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-KKLQPTVRTYVE----N 262
Query: 365 WPEGAA-SRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 423
            P+ A  S E +   +  P       +H    A     LL  +L  D + R++  EAL+H
Sbjct: 263 RPKYAGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 424 PFFT 427
           P+  
Sbjct: 319 PYIN 322

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 153/364 (42%), Gaps = 59/364 (16%)
Query: 79  REDDKDGHYMFALGEN---LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---- 131
           R    +  Y   +G++   +  RY+    +G G  G V   +D   +  VAIK +     
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 132 ----GIKKYREAAMIEIEVLQQLAKHDK--GGNRCVQIRNWFDYRNHICIVFEKLGSSLY 185
                 + YRE       VL ++  H    G       +   +    + IV E + ++L 
Sbjct: 63  NQTHAKRAYREL------VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLS 116
Query: 186 DFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS 245
             ++         + +  +  Q+L  I  +H   +IH DLKP N+++ S   +K+ D+  
Sbjct: 117 QVIQ----MELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG- 171
Query: 246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCD 305
                       R   +S      F  T Y        V TR+YRAPEVILG+G+    D
Sbjct: 172 ----------LARTAGTS------FMMTPY--------VVTRYYRAPEVILGMGYKENVD 207
Query: 306 IWSVGCILVELCTGEALFQTHENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD 364
           IWSVG I+ E+  G  LF   ++++    ++E++  P P+ M K++      YV     +
Sbjct: 208 IWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-KKLQPTVRTYVE----N 262
Query: 365 WPEGAA-SRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 423
            P+ A  S E +   +  P       +H    A     LL  +L  D + R++  EAL+H
Sbjct: 263 RPKYAGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 424 PFFT 427
           P+  
Sbjct: 319 PYIN 322

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 153/364 (42%), Gaps = 59/364 (16%)
Query: 79  REDDKDGHYMFALGEN---LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---- 131
           R    +  Y   +G++   +  RY+    +G G  G V   +D   +  VAIK +     
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 132 ----GIKKYREAAMIEIEVLQQLAKHDK--GGNRCVQIRNWFDYRNHICIVFEKLGSSLY 185
                 + YRE       VL +   H    G       +   +    + IV E + ++L 
Sbjct: 63  NQTHAKRAYREL------VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 116
Query: 186 DFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS 245
             ++         + +  +  Q+L  I  +H   +IH DLKP N+++ S   +K+ D+  
Sbjct: 117 QVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG- 171
Query: 246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCD 305
                       R   +S      F  T Y        V TR+YRAPEVILG+G+    D
Sbjct: 172 ----------LARTAGTS------FMMTPY--------VVTRYYRAPEVILGMGYKENVD 207
Query: 306 IWSVGCILVELCTGEALFQTHENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD 364
           IWSVGCI+ E+  G  LF   ++++    ++E++  P P+ M K++      YV     +
Sbjct: 208 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-KKLQPTVRTYVE----N 262
Query: 365 WPEGAA-SRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 423
            P+ A  S E +   +  P       +H    A     LL  +L  D + R++  EAL+H
Sbjct: 263 RPKYAGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 424 PFFT 427
           P+  
Sbjct: 319 PYIN 322

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/338 (23%), Positives = 140/338 (41%), Gaps = 84/338 (24%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDK 155
           Y I  ++G G FG V  C ++    +   K +     + KY      EI ++ QL  H K
Sbjct: 53  YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKY--TVKNEISIMNQL-HHPK 109
Query: 156 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                + + + F+ +  + ++ E L G  L+D +   +Y+    +++  + RQ  E +  
Sbjct: 110 ----LINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYM-RQACEGLKH 164
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           MH+  ++H D+KPEN++  +                          K+S++K+IDFG  T
Sbjct: 165 MHEHSIVHLDIKPENIMCETK-------------------------KASSVKIIDFGLAT 199
Query: 275 YERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 332
              PD+      +T  + APE++      +  D+W++G +   L +G + F   ++LE L
Sbjct: 200 KLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL 259
Query: 333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 392
                                  + V+R   ++ E A S  S       P  ++ I    
Sbjct: 260 -----------------------QNVKRCDWEFDEDAFSSVS-------PEAKDFI---- 285
Query: 393 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
                      + LL+ +P  RLT  +AL HP+   DH
Sbjct: 286 -----------KNLLQKEPRKRLTVHDALEHPWLKGDH 312

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-----------LARTAGTS--- 179
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 180 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 327 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 384
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 275
Query: 385 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
             +L     +H+   A     LL  +L  DP  R++  +AL+HP+  
Sbjct: 276 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 82.8 bits (203), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG-----------LARTAGTS--- 179
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 180 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 327 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 384
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 275
Query: 385 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
             +L     +H+   A     LL  +L  DP  R++  +AL+HP+  
Sbjct: 276 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 82.8 bits (203), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 36/223 (16%)
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+  +       + F  +P      
Sbjct: 136 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMVP------ 186
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
                            V TR+YRAPEVILG+G+    DIWSVGCI+ E+  G  LF   
Sbjct: 187 ----------------FVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 230
Query: 327 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRL 384
           ++++    ++E++  P P+ M K++      YV     + P+ A  S E +   +  P  
Sbjct: 231 DHIDQWNKVIEQLGTPCPEFM-KKLQPTVRTYVE----NRPKYAGYSFEKLFPDVLFPAD 285
Query: 385 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
                +H    A     LL  +L  D + R++  EAL+HP+  
Sbjct: 286 S----EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 324

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 82.8 bits (203), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 141/355 (39%), Gaps = 93/355 (26%)
Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREA-----AMIEIE 145
           L   Y +   +G G  G+V   ++R+  + VAIKI+      I   REA        EIE
Sbjct: 8   LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 146 VLQQLAKHDKGGNRCV-QIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           +L++L       + C+ +I+N+FD  ++  ++    G  L+D +  N  +       +  
Sbjct: 68  ILKKL------NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLY 119
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H+  +IH DLKPENVLL S E                        +   
Sbjct: 120 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCL 155
Query: 265 IKVIDFGSTTY--ERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTG 319
           IK+ DFG +    E      +  T  Y APEV++ +   G+    D WS+G IL    +G
Sbjct: 156 IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
Query: 320 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW-PEGAASRESIKSV 378
              F  H                      R     +  +  G+ ++ PE           
Sbjct: 216 YPPFSEH----------------------RTQVSLKDQITSGKYNFIPE----------- 242
Query: 379 MKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 433
                    +   V   A D   L++ LL  DP  R T  EALRHP+   + ++R
Sbjct: 243 ---------VWAEVSEKALD---LVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 285

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 90/364 (24%), Positives = 153/364 (42%), Gaps = 59/364 (16%)
Query: 79  REDDKDGHYMFALGEN---LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---- 131
           R    +  Y   +G++   +  RY+    +G G  G V   +D   +  VAIK +     
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 132 ----GIKKYREAAMIEIEVLQQLAKHDK--GGNRCVQIRNWFDYRNHICIVFEKLGSSLY 185
                 + YRE       VL +   H    G       +   +    + IV E + ++L 
Sbjct: 63  NQTHAKRAYREL------VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 116
Query: 186 DFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS 245
             ++         + +  +  Q+L  I  +H   +IH DLKP N+++ S   +K+ D+  
Sbjct: 117 QVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
Query: 246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCD 305
           +                        G++    P+    V TR+YRAPEVILG+G+    D
Sbjct: 173 ARTA---------------------GTSFMMTPE----VVTRYYRAPEVILGMGYKENVD 207
Query: 306 IWSVGCILVELCTGEALFQTHENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD 364
           IWSVGCI+ E+  G  LF   ++++    ++E++  P P+ M K++      YV     +
Sbjct: 208 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM-KKLQPTVRTYVE----N 262
Query: 365 WPEGAA-SRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 423
            P+ A  S E +   +  P       +H    A     LL  +L  D + R++  EAL+H
Sbjct: 263 RPKYAGYSFEKLFPDVLFPADS----EHNALKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 424 PFFT 427
           P+  
Sbjct: 319 PYIN 322

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 141/355 (39%), Gaps = 93/355 (26%)
Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREA-----AMIEIE 145
           L   Y +   +G G  G+V   ++R+  + VAIKI+      I   REA        EIE
Sbjct: 7   LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 66
Query: 146 VLQQLAKHDKGGNRCV-QIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           +L++L       + C+ +I+N+FD  ++  ++    G  L+D +  N  +       +  
Sbjct: 67  ILKKL------NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLY 118
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H+  +IH DLKPENVLL S E                        +   
Sbjct: 119 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCL 154
Query: 265 IKVIDFGSTTY--ERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTG 319
           IK+ DFG +    E      +  T  Y APEV++ +   G+    D WS+G IL    +G
Sbjct: 155 IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
Query: 320 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW-PEGAASRESIKSV 378
              F  H                      R     +  +  G+ ++ PE           
Sbjct: 215 YPPFSEH----------------------RTQVSLKDQITSGKYNFIPE----------- 241
Query: 379 MKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 433
                    +   V   A D   L++ LL  DP  R T  EALRHP+   + ++R
Sbjct: 242 ---------VWAEVSEKALD---LVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 284

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 141/355 (39%), Gaps = 93/355 (26%)
Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREA-----AMIEIE 145
           L   Y +   +G G  G+V   ++R+  + VAIKI+      I   REA        EIE
Sbjct: 8   LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 146 VLQQLAKHDKGGNRCV-QIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           +L++L       + C+ +I+N+FD  ++  ++    G  L+D +  N  +       +  
Sbjct: 68  ILKKL------NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLY 119
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H+  +IH DLKPENVLL S E                        +   
Sbjct: 120 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCL 155
Query: 265 IKVIDFGSTTY--ERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTG 319
           IK+ DFG +    E      +  T  Y APEV++ +   G+    D WS+G IL    +G
Sbjct: 156 IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
Query: 320 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW-PEGAASRESIKSV 378
              F  H                      R     +  +  G+ ++ PE           
Sbjct: 216 YPPFSEH----------------------RTQVSLKDQITSGKYNFIPE----------- 242
Query: 379 MKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 433
                    +   V   A D   L++ LL  DP  R T  EALRHP+   + ++R
Sbjct: 243 ---------VWAEVSEKALD---LVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 285

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 141/355 (39%), Gaps = 93/355 (26%)
Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREA-----AMIEIE 145
           L   Y +   +G G  G+V   ++R+  + VAIKI+      I   REA        EIE
Sbjct: 8   LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 146 VLQQLAKHDKGGNRCV-QIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           +L++L       + C+ +I+N+FD  ++  ++    G  L+D +  N  +       +  
Sbjct: 68  ILKKL------NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLY 119
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H+  +IH DLKPENVLL S E                        +   
Sbjct: 120 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCL 155
Query: 265 IKVIDFGSTTY--ERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTG 319
           IK+ DFG +    E      +  T  Y APEV++ +   G+    D WS+G IL    +G
Sbjct: 156 IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
Query: 320 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW-PEGAASRESIKSV 378
              F  H                      R     +  +  G+ ++ PE           
Sbjct: 216 YPPFSEH----------------------RTQVSLKDQITSGKYNFIPE----------- 242
Query: 379 MKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 433
                    +   V   A D   L++ LL  DP  R T  EALRHP+   + ++R
Sbjct: 243 ---------VWAEVSEKALD---LVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 285

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 82.4 bits (202), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 121/257 (47%), Gaps = 46/257 (17%)
Query: 174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 233
            +VFE + ++  DF  K  Y++     +R    ++L+ + + H + ++H D+KP NVL +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVL-I 164
Query: 234 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 291
             E+ K                         +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 292 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 349
           PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG   + +   
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDY 257
Query: 350 VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY 409
           +D++  +   R           R S K   +    +N   QH+   + +    L  LLRY
Sbjct: 258 IDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL--VSPEALDFLDKLLRY 307
Query: 410 DPTDRLTAREALRHPFF 426
           D   RLTAREA+ HP+F
Sbjct: 308 DHQSRLTAREAMEHPYF 324

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 81.6 bits (200), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 217
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 218 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266
Query: 327 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 384
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 267 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 313
Query: 385 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
             +L     +H+   A     LL  +L  DP  R++  +AL+HP+  
Sbjct: 314 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 81.6 bits (200), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 217
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 218 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266
Query: 327 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 384
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 267 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 313
Query: 385 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
             +L     +H+   A     LL  +L  DP  R++  +AL+HP+  
Sbjct: 314 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 81.6 bits (200), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 180
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 181 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 229
Query: 327 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 384
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 230 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 276
Query: 385 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
             +L     +H+   A     LL  +L  DP  R++  +AL+HP+  
Sbjct: 277 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 81.6 bits (200), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 46/257 (17%)
Query: 174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 233
            +VFE + ++  DF  K  Y++     +R    ++L+ + + H + ++H D+KP NV+ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 234 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 291
             E+ K                         +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 292 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 349
           PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG   + +   
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDY 257
Query: 350 VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY 409
           +D++  +   R           R S K   +    +N   QH+   + +    L  LLRY
Sbjct: 258 IDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL--VSPEALDFLDKLLRY 307
Query: 410 DPTDRLTAREALRHPFF 426
           D   RLTAREA+ HP+F
Sbjct: 308 DHQSRLTAREAMEHPYF 324

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 81.6 bits (200), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 179
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 180 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 327 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 384
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 275
Query: 385 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
             +L     +H+   A     LL  +L  DP  R++  +AL+HP+  
Sbjct: 276 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score = 81.6 bits (200), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 46/257 (17%)
Query: 174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 233
            +VFE + ++  DF  K  Y++     +R    ++L+ + + H + ++H D+KP NV+ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 234 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 291
             E+ K                         +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 292 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 349
           PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG   + +   
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDY 257
Query: 350 VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY 409
           +D++  +   R           R S K   +    +N   QH+   + +    L  LLRY
Sbjct: 258 IDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL--VSPEALDFLDKLLRY 307
Query: 410 DPTDRLTAREALRHPFF 426
           D   RLTAREA+ HP+F
Sbjct: 308 DHQSRLTAREAMEHPYF 324

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 81.6 bits (200), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 179
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 180 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 327 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 384
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 275
Query: 385 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
             +L     +H+   A     LL  +L  DP  R++  +AL+HP+  
Sbjct: 276 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 81.6 bits (200), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 180
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 181 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 229
Query: 327 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 384
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 230 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 276
Query: 385 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
             +L     +H+   A     LL  +L  DP  R++  +AL+HP+  
Sbjct: 277 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 81.6 bits (200), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 46/257 (17%)
Query: 174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 233
            +VFE + ++  DF  K  Y++     +R    ++L+ + + H + ++H D+KP NV+ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 234 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 291
             E+ K                         +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 292 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 349
           PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG   + +   
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDY 257
Query: 350 VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY 409
           +D++  +   R           R S K   +    +N   QH+   + +    L  LLRY
Sbjct: 258 IDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL--VSPEALDFLDKLLRY 307
Query: 410 DPTDRLTAREALRHPFF 426
           D   RLTAREA+ HP+F
Sbjct: 308 DHQSRLTAREAMEHPYF 324

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 81.6 bits (200), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 133 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 178
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 179 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 227
Query: 327 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 384
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 228 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 274
Query: 385 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
             +L     +H+   A     LL  +L  DP  R++  +AL+HP+  
Sbjct: 275 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 321

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 81.3 bits (199), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 46/257 (17%)
Query: 174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 233
            +VFE + ++  DF  K  Y++     +R    ++L+ + + H + ++H D+KP NV+ +
Sbjct: 108 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 162
Query: 234 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 291
             E+ K                         +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 163 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 197
Query: 292 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 349
           PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG   + +   
Sbjct: 198 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDY 255
Query: 350 VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY 409
           +D++  +   R           R S K   +    +N   QH+   + +    L  LLRY
Sbjct: 256 IDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL--VSPEALDFLDKLLRY 305
Query: 410 DPTDRLTAREALRHPFF 426
           D   RLTAREA+ HP+F
Sbjct: 306 DHQSRLTAREAMEHPYF 322

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 81.3 bits (199), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 46/257 (17%)
Query: 174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 233
            +VFE + ++  DF  K  Y++     +R    ++L+ + + H + ++H D+KP NV+ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 234 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 291
             E+ K                         +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 292 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 349
           PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG   + +   
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDY 257
Query: 350 VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY 409
           +D++  +   R           R S K   +    +N   QH+   + +    L  LLRY
Sbjct: 258 IDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL--VSPEALDFLDKLLRY 307
Query: 410 DPTDRLTAREALRHPFF 426
           D   RLTAREA+ HP+F
Sbjct: 308 DHQSRLTAREAMEHPYF 324

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 81.3 bits (199), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 46/257 (17%)
Query: 174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 233
            +VFE + ++  DF  K  Y++     +R    ++L+ + + H + ++H D+KP NV+ +
Sbjct: 109 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 163
Query: 234 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 291
             E+ K                         +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 164 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 198
Query: 292 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 349
           PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG   + +   
Sbjct: 199 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDY 256
Query: 350 VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY 409
           +D++  +   R           R S K   +    +N   QH+   + +    L  LLRY
Sbjct: 257 IDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL--VSPEALDFLDKLLRY 306
Query: 410 DPTDRLTAREALRHPFF 426
           D   RLTAREA+ HP+F
Sbjct: 307 DHQSRLTAREAMEHPYF 323

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 81.3 bits (199), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 46/257 (17%)
Query: 174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 233
            +VFE + ++  DF  K  Y++     +R    ++L+ + + H + ++H D+KP NV+ +
Sbjct: 109 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 163
Query: 234 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 291
             E+ K                         +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 164 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 198
Query: 292 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 349
           PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG   + +   
Sbjct: 199 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDY 256
Query: 350 VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY 409
           +D++  +   R           R S K   +    +N   QH+   + +    L  LLRY
Sbjct: 257 IDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL--VSPEALDFLDKLLRY 306
Query: 410 DPTDRLTAREALRHPFF 426
           D   RLTAREA+ HP+F
Sbjct: 307 DHQSRLTAREAMEHPYF 323

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 81.3 bits (199), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 46/257 (17%)
Query: 174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 233
            +VFE + ++  DF  K  Y++     +R    ++L+ + + H + ++H D+KP NV+ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 234 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 291
             E+ K                         +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 292 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 349
           PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG   + +   
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDY 257
Query: 350 VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY 409
           +D++  +   R           R S K   +    +N   QH+   + +    L  LLRY
Sbjct: 258 IDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL--VSPEALDFLDKLLRY 307
Query: 410 DPTDRLTAREALRHPFF 426
           D   RLTAREA+ HP+F
Sbjct: 308 DHQSRLTAREAMEHPYF 324

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 81.3 bits (199), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 46/257 (17%)
Query: 174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 233
            +VFE + ++  DF  K  Y++     +R    ++L+ + + H + ++H D+KP NV+ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 234 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 291
             E+ K                         +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 292 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 349
           PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG   + +   
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDY 257
Query: 350 VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY 409
           +D++  +   R           R S K   +    +N   QH+   + +    L  LLRY
Sbjct: 258 IDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL--VSPEALDFLDKLLRY 307
Query: 410 DPTDRLTAREALRHPFF 426
           D   RLTAREA+ HP+F
Sbjct: 308 DHQSRLTAREAMEHPYF 324

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 81.3 bits (199), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 46/257 (17%)
Query: 174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 233
            +VFE + ++  DF  K  Y++     +R    ++L+ + + H + ++H D+KP NV+ +
Sbjct: 115 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 169
Query: 234 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 291
             E+ K                         +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 170 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 204
Query: 292 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 349
           PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG   + +   
Sbjct: 205 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDY 262
Query: 350 VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY 409
           +D++  +   R           R S K   +    +N   QH+   + +    L  LLRY
Sbjct: 263 IDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL--VSPEALDFLDKLLRY 312
Query: 410 DPTDRLTAREALRHPFF 426
           D   RLTAREA+ HP+F
Sbjct: 313 DHQSRLTAREAMEHPYF 329

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 81.3 bits (199), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 46/257 (17%)
Query: 174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 233
            +VFE + ++  DF  K  Y++     +R    ++L+ + + H + ++H D+KP NV+ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 234 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 291
             E+ K                         +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 292 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 349
           PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG   + +   
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDY 257
Query: 350 VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY 409
           +D++  +   R           R S K   +    +N   QH+   + +    L  LLRY
Sbjct: 258 IDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL--VSPEALDFLDKLLRY 307
Query: 410 DPTDRLTAREALRHPFF 426
           D   RLTAREA+ HP+F
Sbjct: 308 DHQSRLTAREAMEHPYF 324

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 172
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 173 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221
Query: 327 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 384
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 222 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 268
Query: 385 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
             +L     +H+   A     LL  +L  DP  R++  +AL+HP+  
Sbjct: 269 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 173
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 174 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 222
Query: 327 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 384
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 223 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 269
Query: 385 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
             +L     +H+   A     LL  +L  DP  R++  +AL+HP+  
Sbjct: 270 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 44/227 (19%)
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 173
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
              F  T Y        V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 174 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 222
Query: 327 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL- 384
           + ++    ++E++  P P+ M K++      YV     + P+ A         +  P+L 
Sbjct: 223 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRNYVE----NRPKYAG--------LTFPKLF 269
Query: 385 -QNLIMQHVDHS---AGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
             +L     +H+   A     LL  +L  DP  R++  +AL+HP+  
Sbjct: 270 PDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 46/257 (17%)
Query: 174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 233
            +VFE + ++  DF  K  Y++     +R    ++L+ + + H + ++H D+KP NV+ +
Sbjct: 110 ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 234 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 291
             E+ K                         +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 292 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 349
           PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG   + +   
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDY 257
Query: 350 VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY 409
           +D++  +   R           R S K   +    +N   QH+   + +    L  LLRY
Sbjct: 258 IDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL--VSPEALDFLDKLLRY 307
Query: 410 DPTDRLTAREALRHPFF 426
           D   RLTAREA+ HP+F
Sbjct: 308 DHQSRLTAREAMEHPYF 324

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/355 (24%), Positives = 141/355 (39%), Gaps = 93/355 (26%)
Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREA-----AMIEIE 145
           L   Y +   +G G  G+V   ++R+  + VAI+I+      I   REA        EIE
Sbjct: 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE 192
Query: 146 VLQQLAKHDKGGNRCV-QIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           +L++L       + C+ +I+N+FD  ++  ++    G  L+D +  N  +       +  
Sbjct: 193 ILKKL------NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLY 244
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H+  +IH DLKPENVLL S E                        +   
Sbjct: 245 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCL 280
Query: 265 IKVIDFGSTTY--ERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTG 319
           IK+ DFG +    E      +  T  Y APEV++ +   G+    D WS+G IL    +G
Sbjct: 281 IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
Query: 320 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW-PEGAASRESIKSV 378
              F  H                      R     +  +  G+ ++ PE           
Sbjct: 341 YPPFSEH----------------------RTQVSLKDQITSGKYNFIPE----------- 367
Query: 379 MKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 433
                    +   V   A D   L++ LL  DP  R T  EALRHP+   + ++R
Sbjct: 368 ---------VWAEVSEKALD---LVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 410

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/355 (24%), Positives = 141/355 (39%), Gaps = 93/355 (26%)
Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREA-----AMIEIE 145
           L   Y +   +G G  G+V   ++R+  + VAI+I+      I   REA        EIE
Sbjct: 147 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE 206
Query: 146 VLQQLAKHDKGGNRCV-QIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
           +L++L       + C+ +I+N+FD  ++  ++    G  L+D +  N  +       +  
Sbjct: 207 ILKKL------NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLY 258
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  + ++H+  +IH DLKPENVLL S E                        +   
Sbjct: 259 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCL 294
Query: 265 IKVIDFGSTTY--ERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTG 319
           IK+ DFG +    E      +  T  Y APEV++ +   G+    D WS+G IL    +G
Sbjct: 295 IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
Query: 320 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW-PEGAASRESIKSV 378
              F  H                      R     +  +  G+ ++ PE           
Sbjct: 355 YPPFSEH----------------------RTQVSLKDQITSGKYNFIPE----------- 381
Query: 379 MKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 433
                    +   V   A D   L++ LL  DP  R T  EALRHP+   + ++R
Sbjct: 382 ---------VWAEVSEKALD---LVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 424

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 120/257 (46%), Gaps = 46/257 (17%)
Query: 174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 233
            +VFE + ++ +  LR+    +     +R    ++L+ + + H + ++H D+KP NV+ +
Sbjct: 110 ALVFEHVNNTDFKQLRQ----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM-I 164
Query: 234 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 291
             E+ K                         +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 165 DHEHRK-------------------------LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 292 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 349
           PE+++    + Y  D+WS+GC+L  +    E  F  H+N + L  + +VLG   + +   
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT--EDLYDY 257
Query: 350 VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY 409
           +D++  +   R           R S K   +    +N   QH+   + +    L  LLRY
Sbjct: 258 IDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL--VSPEALDFLDKLLRY 307
Query: 410 DPTDRLTAREALRHPFF 426
           D   RLTAREA+ HP+F
Sbjct: 308 DHQSRLTAREAMEHPYF 324

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 152/364 (41%), Gaps = 59/364 (16%)
Query: 79  REDDKDGHYMFALGEN---LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV----- 130
           R    +  Y   +G++   +  RY+    +G G  G V   +D   +  VAIK +     
Sbjct: 8   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 67
Query: 131 ---RGIKKYREAAMIEIEVLQQLAKHDK--GGNRCVQIRNWFDYRNHICIVFEKLGSSLY 185
                 + YRE       VL +   H    G       +   +    + IV E + ++L 
Sbjct: 68  NQTHAKRAYREL------VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 121
Query: 186 DFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS 245
             ++         + +  +  Q+L  I  +H   +IH DLKP N+++ S   +K+ D+  
Sbjct: 122 QVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG- 176
Query: 246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCD 305
                       R   +S      F  T Y        V TR+YRAPEVILG+G+    D
Sbjct: 177 ----------LARTAGTS------FMMTPY--------VVTRYYRAPEVILGMGYKENVD 212
Query: 306 IWSVGCILVELCTGEALFQTHENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD 364
           +WSVGCI+ E+   + LF   + ++    ++E++  P P+ M K++      YV     +
Sbjct: 213 LWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFM-KKLQPTVRTYVE----N 267
Query: 365 WPEGAA-SRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 423
            P+ A  S E +   +  P       +H    A     LL  +L  D + R++  EAL+H
Sbjct: 268 RPKYAGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEALQH 323
Query: 424 PFFT 427
           P+  
Sbjct: 324 PYIN 327

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 36/223 (16%)
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+              R   +S   
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG-----------LARTAGTS--- 173
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
              F  T Y        V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   
Sbjct: 174 ---FMMTPY--------VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGR 222
Query: 327 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRL 384
           + ++    ++E++  P P+ M K++      YV     + P+ A  S E +   +  P  
Sbjct: 223 DYIDQWNKVIEQLGTPCPEFM-KKLQPTVRTYVE----NRPKYAGYSFEKLFPDVLFPAD 277
Query: 385 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
                +H    A     LL  +L  D + R++  EAL+HP+  
Sbjct: 278 S----EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 316

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 103/223 (46%), Gaps = 36/223 (16%)
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L  I  +H   +IH DLKP N+++ S   +K+ D+  +                    
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA----------------- 176
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
               G++    P+    V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   
Sbjct: 177 ----GTSFMMEPE----VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGR 228
Query: 327 ENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA-SRESIKSVMKLPRL 384
           + ++    ++E++  P P  M K++      YV     + P+ A  S E +   +  P  
Sbjct: 229 DYIDQWNKVIEQLGTPCPAFM-KKLQPTVRNYVE----NRPKYAGYSFEKLFPDVLFPAD 283
Query: 385 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
                +H    A     LL  +L  D + R++  EAL+HP+  
Sbjct: 284 S----EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 78.2 bits (191), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 152/364 (41%), Gaps = 59/364 (16%)
Query: 79  REDDKDGHYMFALGEN---LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV----- 130
           R    +  Y   +G++   +  RY+    +G G  G V   +D   +  VAIK +     
Sbjct: 3   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 131 ---RGIKKYREAAMIEIEVLQQLAKHDK--GGNRCVQIRNWFDYRNHICIVFEKLGSSLY 185
                 + YRE       VL +   H    G       +   +    + IV E + ++L 
Sbjct: 63  NQTHAKRAYREL------VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 116
Query: 186 DFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS 245
             ++         + +  +  Q+L  I  +H   +IH DLKP N+++ S   +K+ D+  
Sbjct: 117 QVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
Query: 246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCD 305
           +                        G++    P+    V TR+YRAPEVILG+G+    D
Sbjct: 173 ARTA---------------------GTSFMMEPE----VVTRYYRAPEVILGMGYKENVD 207
Query: 306 IWSVGCILVELCTGEALFQTHENLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD 364
           +WSVGCI+ E+   + LF   + ++    ++E++  P P+ M K++      YV     +
Sbjct: 208 LWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFM-KKLQPTVRTYVE----N 262
Query: 365 WPEGAA-SRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 423
            P+ A  S E +   +  P       +H    A     LL  +L  D + R++  EAL+H
Sbjct: 263 RPKYAGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318
Query: 424 PFFT 427
           P+  
Sbjct: 319 PYIN 322

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 107/251 (42%), Gaps = 48/251 (19%)
Query: 196 FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 255
            P  +V+ +  Q+L+ I ++H   ++H DLKP N+L++                      
Sbjct: 125 LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG------------------- 165
Query: 256 FKRMPKSSAIKVIDFG-STTYERP-----DQNYIVSTRHYRAPEVILGL-GWTYPCDIWS 308
               P+   +K+ D G +  +  P     D + +V T  YRAPE++LG   +T   DIW+
Sbjct: 166 ----PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWA 221
Query: 309 VGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG 368
           +GCI  EL T E +F   +        E +    P H   ++DR           DW E 
Sbjct: 222 IGCIFAELLTSEPIFHCRQ--------EDIKTSNPYHH-DQLDRIFNVMGFPADKDW-ED 271
Query: 369 AASRESIKSVMKLPR--------LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA 420
                   ++MK  R        L   + +H         HLLQ LL  DP  R+T+ +A
Sbjct: 272 IKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQA 331
Query: 421 LRHPFFTRDHL 431
           ++ P+F  D L
Sbjct: 332 MQDPYFLEDPL 342

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 44/233 (18%)
Query: 201 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 260
           +R    +LL+ + + H   ++H D+KP NV+ +  E  K                     
Sbjct: 148 IRYYIYELLKALDYCHSQGIMHRDVKPHNVM-IDHELRK--------------------- 185
Query: 261 KSSAIKVIDFGSTTYERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC 317
               +++ID+G   +  P + Y V  ++R+++ PE+++ L  + Y  D+WS+GC+   + 
Sbjct: 186 ----LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 241
Query: 318 -TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-WPEGAASRESI 375
              E  F  H+N + L  + +VLG         ++ +  KY  R  LD   E    R S 
Sbjct: 242 FRKEPFFYGHDNHDQLVKIAKVLGT------DGLNAYLNKY--RIELDPQLEALVGRHSR 293
Query: 376 KSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           K  +K     N   QH+   + +    L  LLRYD  +RLTA EA+ HP+F +
Sbjct: 294 KPWLKFMNADN---QHL--VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 341

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/339 (23%), Positives = 132/339 (38%), Gaps = 80/339 (23%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY-REAAMIEIEVLQQLA 151
           +++   Y IH ++G G FG V    +R      A K V    +  +E    EI+ +  L 
Sbjct: 47  DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL- 105
Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
           +H       V + + F+  N + +++E + G  L++ +  + +     D   E  RQ+ +
Sbjct: 106 RHPT----LVNLHDAFEDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMRQVCK 160
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            +  MH+   +H DLKPEN++  +                          +S+ +K+IDF
Sbjct: 161 GLCHMHENNYVHLDLKPENIMFTTK-------------------------RSNELKLIDF 195
Query: 271 GSTTYERPDQNYIVS--TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 328
           G T +  P Q+  V+  T  + APEV  G    Y  D+WSVG +   L +G + F    +
Sbjct: 196 GLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND 255
Query: 329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 388
            E L  ++                           DW    ++   I             
Sbjct: 256 DETLRNVKSC-------------------------DWNMDDSAFSGISE----------- 279
Query: 389 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
                    D    ++ LL  DP  R+T  +AL HP+ T
Sbjct: 280 ---------DGKDFIRKLLLADPNTRMTIHQALEHPWLT 309

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 44/233 (18%)
Query: 201 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 260
           +R    +LL+ + + H   ++H D+KP NV+ +  E  K                     
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVM-IDHELRK--------------------- 164
Query: 261 KSSAIKVIDFGSTTYERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC 317
               +++ID+G   +  P + Y V  ++R+++ PE+++ L  + Y  D+WS+GC+   + 
Sbjct: 165 ----LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 220
Query: 318 -TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-WPEGAASRESI 375
              E  F  H+N + L  + +VLG         ++ +  KY  R  LD   E    R S 
Sbjct: 221 FRKEPFFYGHDNHDQLVKIAKVLGT------DGLNVYLNKY--RIELDPQLEALVGRHSR 272
Query: 376 KSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           K  +K     N   QH+   + +    L  LLRYD  +RLTA EA+ HP+F +
Sbjct: 273 KPWLKFMNADN---QHL--VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 44/233 (18%)
Query: 201 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 260
           +R    +LL+ + + H   ++H D+KP NV+ +  E  K                     
Sbjct: 128 IRYYIYELLKALDYCHSQGIMHRDVKPHNVM-IDHELRK--------------------- 165
Query: 261 KSSAIKVIDFGSTTYERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC 317
               +++ID+G   +  P + Y V  ++R+++ PE+++ L  + Y  D+WS+GC+   + 
Sbjct: 166 ----LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 221
Query: 318 -TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-WPEGAASRESI 375
              E  F  H+N + L  + +VLG         ++ +  KY  R  LD   E    R S 
Sbjct: 222 FRKEPFFYGHDNHDQLVKIAKVLGT------DGLNVYLNKY--RIELDPQLEALVGRHSR 273
Query: 376 KSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           K  +K     N   QH+   + +    L  LLRYD  +RLTA EA+ HP+F +
Sbjct: 274 KPWLKFMNADN---QHL--VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 321

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/339 (22%), Positives = 131/339 (38%), Gaps = 80/339 (23%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY-REAAMIEIEVLQQLA 151
           +++   Y IH ++G G FG V    +R      A K V    +  +E    EI+ +  L 
Sbjct: 153 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL- 211
Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
           +H       V + + F+  N + +++E + G  L++ +  + +     D   E  RQ+ +
Sbjct: 212 RHPT----LVNLHDAFEDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMRQVCK 266
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            +  MH+   +H DLKPEN++  +                          +S+ +K+IDF
Sbjct: 267 GLCHMHENNYVHLDLKPENIMFTTK-------------------------RSNELKLIDF 301
Query: 271 GSTTYERPDQNYIVS--TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 328
           G T +  P Q+  V+  T  + APEV  G    Y  D+WSVG +   L +G + F    +
Sbjct: 302 GLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND 361
Query: 329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 388
            E L  ++     +       +    + ++R+                            
Sbjct: 362 DETLRNVKSCDWNMDDSAFSGISEDGKDFIRK---------------------------- 393
Query: 389 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
                            LL  DP  R+T  +AL HP+ T
Sbjct: 394 -----------------LLLADPNTRMTIHQALEHPWLT 415

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 44/233 (18%)
Query: 201 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 260
           +R    +LL+ + + H   ++H D+KP NV+ +  E  K                     
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVM-IDHELRK--------------------- 164
Query: 261 KSSAIKVIDFGSTTYERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC 317
               +++ID+G   +  P + Y V  ++R+++ PE+++ L  + Y  D+WS+GC+   + 
Sbjct: 165 ----LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 220
Query: 318 -TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-WPEGAASRESI 375
              E  F  H+N + L  + +VLG         ++ +  KY  R  LD   E    R S 
Sbjct: 221 FRKEPFFYGHDNHDQLVKIAKVLGT------DGLNVYLNKY--RIELDPQLEALVGRHSR 272
Query: 376 KSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           K  +K     N   QH+   + +    L  LLRYD  +RLTA EA+ HP+F +
Sbjct: 273 KPWLKFMNADN---QHL--VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 44/233 (18%)
Query: 201 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 260
           +R    +LL+ + + H   ++H D+KP NV+ +  E  K                     
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVM-IDHELRK--------------------- 164
Query: 261 KSSAIKVIDFGSTTYERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC 317
               +++ID+G   +  P + Y V  ++R+++ PE+++ L  + Y  D+WS+GC+   + 
Sbjct: 165 ----LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 220
Query: 318 -TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-WPEGAASRESI 375
              E  F  H+N + L  + +VLG         ++ +  KY  R  LD   E    R S 
Sbjct: 221 FRKEPFFYGHDNHDQLVKIAKVLGT------DGLNVYLNKY--RIELDPQLEALVGRHSR 272
Query: 376 KSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           K  +K     N   QH+   + +    L  LLRYD  +RLTA EA+ HP+F +
Sbjct: 273 KPWLKFMNADN---QHL--VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 44/233 (18%)
Query: 201 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 260
           +R    +LL+ + + H   ++H D+KP NV+ +  E  K                     
Sbjct: 128 IRYYIYELLKALDYCHSQGIMHRDVKPHNVM-IDHELRK--------------------- 165
Query: 261 KSSAIKVIDFGSTTYERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC 317
               +++ID+G   +  P + Y V  ++R+++ PE+++ L  + Y  D+WS+GC+   + 
Sbjct: 166 ----LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 221
Query: 318 -TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-WPEGAASRESI 375
              E  F  H+N + L  + +VLG         ++ +  KY  R  LD   E    R S 
Sbjct: 222 FRKEPFFYGHDNHDQLVKIAKVLGT------DGLNVYLNKY--RIELDPQLEALVGRHSR 273
Query: 376 KSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           K  +K     N   QH+   + +    L  LLRYD  +RLTA EA+ HP+F +
Sbjct: 274 KPWLKFMNADN---QHL--VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 321

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 44/233 (18%)
Query: 201 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 260
           +R    +LL+ + + H   ++H D+KP NV+ +  E  K                     
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVM-IDHELRK--------------------- 164
Query: 261 KSSAIKVIDFGSTTYERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC 317
               +++ID+G   +  P + Y V  ++R+++ PE+++ L  + Y  D+WS+GC+   + 
Sbjct: 165 ----LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 220
Query: 318 -TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-WPEGAASRESI 375
              E  F  H+N + L  + +VLG         ++ +  KY  R  LD   E    R S 
Sbjct: 221 FRKEPFFYGHDNHDQLVKIAKVLGT------DGLNVYLNKY--RIELDPQLEALVGRHSR 272
Query: 376 KSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           K  +K     N   QH+   + +    L  LLRYD  +RLTA EA+ HP+F +
Sbjct: 273 KPWLKFMNADN---QHL--VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 44/233 (18%)
Query: 201 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 260
           +R    +LL+ + + H   ++H D+KP NV+ +  E  K                     
Sbjct: 129 IRYYIYELLKALDYCHSQGIMHRDVKPHNVM-IDHELRK--------------------- 166
Query: 261 KSSAIKVIDFGSTTYERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC 317
               +++ID+G   +  P + Y V  ++R+++ PE+++ L  + Y  D+WS+GC+   + 
Sbjct: 167 ----LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 222
Query: 318 -TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-WPEGAASRESI 375
              E  F  H+N + L  + +VLG         ++ +  KY  R  LD   E    R S 
Sbjct: 223 FRKEPFFYGHDNHDQLVKIAKVLGT------DGLNVYLNKY--RIELDPQLEALVGRHSR 274
Query: 376 KSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           K  +K     N   QH+   + +    L  LLRYD  +RLTA EA+ HP+F +
Sbjct: 275 KPWLKFMNADN---QHL--VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 322

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 44/233 (18%)
Query: 201 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 260
           +R    +LL+ + + H   ++H D+KP NV+ +  E  K                     
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVM-IDHELRK--------------------- 164
Query: 261 KSSAIKVIDFGSTTYERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC 317
               +++ID+G   +  P + Y V  ++R+++ PE+++ L  + Y  D+WS+GC+   + 
Sbjct: 165 ----LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 220
Query: 318 -TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-WPEGAASRESI 375
              E  F  H+N + L  + +VLG         ++ +  KY  R  LD   E    R S 
Sbjct: 221 FRKEPFFYGHDNHDQLVKIAKVLGT------DGLNVYLNKY--RIELDPQLEALVGRHSR 272
Query: 376 KSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           K  +K     N   QH+   + +    L  LLRYD  +RLTA EA+ HP+F +
Sbjct: 273 KPWLKFMNADN---QHL--VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 44/233 (18%)
Query: 201 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 260
           +R    +LL+ + + H   ++H D+KP NV+ +  E  K                     
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVM-IDHELRK--------------------- 164
Query: 261 KSSAIKVIDFGSTTYERPDQNYIV--STRHYRAPEVILGL-GWTYPCDIWSVGCILVELC 317
               +++ID+G   +  P + Y V  ++R+++ PE+++ L  + Y  D+WS+GC+   + 
Sbjct: 165 ----LRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 220
Query: 318 T-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-WPEGAASRESI 375
              E  F  H+N + L  + +VLG         ++ +  KY  R  LD   E    R S 
Sbjct: 221 FRKEPFFYGHDNHDQLVKIAKVLGT------DGLNVYLNKY--RIELDPQLEALVGRHSR 272
Query: 376 KSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           K  +K     N   QH+   + +    L  LLRYD  +RLTA EA+ HP+F +
Sbjct: 273 KPWLKFMNADN---QHL--VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 151/363 (41%), Gaps = 85/363 (23%)
Query: 92  GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREAAMIEIEVLQQL 150
           G +L SRY     +G G  G V    D +  + VAIK IV    +  + A+ EI+++++L
Sbjct: 6   GFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRL 65
Query: 151 AKHDK----------GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDL 200
             HD            G++           N + IV E + + L + L +         L
Sbjct: 66  -DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQG-------PL 117
Query: 201 VREIAR----QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF 256
           + E AR    QLL  + ++H   ++H DLKP N+ + + + +                  
Sbjct: 118 LEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLV------------------ 159
Query: 257 KRMPKSSAIKVIDFGSTTYERPDQNYI------VSTRHYRAPEVILGLG-WTYPCDIWSV 309
                   +K+ DFG      P  ++       + T+ YR+P ++L    +T   D+W+ 
Sbjct: 160 --------LKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAA 211
Query: 310 GCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRH-----AEKYVRRGRLD 364
           GCI  E+ TG+ LF     LE    M+ +L  +P  ++   DR         Y+R     
Sbjct: 212 GCIFAEMLTGKTLFAGAHELEQ---MQLILESIP--VVHEEDRQELLSVIPVYIRNDM-- 264
Query: 365 WPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 424
                   E  K + +L  L  +  + VD         L+ +L + P DRLTA EAL HP
Sbjct: 265 -------TEPHKPLTQL--LPGISREAVD--------FLEQILTFSPMDRLTAEEALSHP 307
Query: 425 FFT 427
           + +
Sbjct: 308 YMS 310

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 137/356 (38%), Gaps = 92/356 (25%)
Query: 89  FALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---------GIKKYREA 139
           +A  +    +Y     +G G    V  C  R      A+KI+           +++ REA
Sbjct: 86  WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREA 145
Query: 140 AMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPI 198
              E  +L+Q+A H       + + + ++  + + +VF+ +    L+D+L +    +   
Sbjct: 146 TRRETHILRQVAGHP----HIITLIDSYESSSFMFLVFDLMRKGELFDYLTEK--VALSE 199
Query: 199 DLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKR 258
              R I R LLE ++F+H   ++H DLKPEN+LL  +  I++ D+  S H          
Sbjct: 200 KETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCH---------- 249
Query: 259 MPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVI-LGLGWTYP-----CDIWSVGCI 312
                    ++ G    E      +  T  Y APE++   +  T+P      D+W+ G I
Sbjct: 250 ---------LEPGEKLRE------LCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVI 294
Query: 313 LVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASR 372
           L  L  G   F     +  L M+                   E   +    +W       
Sbjct: 295 LFTLLAGSPPFWHRRQILMLRMI------------------MEGQYQFSSPEW------- 329
Query: 373 ESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                               D  +  +  L+  LL+ DP  RLTA +AL+HPFF R
Sbjct: 330 --------------------DDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 141/343 (41%), Gaps = 84/343 (24%)
Query: 95  LTSRYKIHSK-MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKH 153
           +T  Y++  + +G G  G+VLEC+ R   +  A+K++    K R+    E++   Q +  
Sbjct: 26  VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ----EVDHHWQAS-- 79
Query: 154 DKGGNRCVQIRNWFDYRNH----ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL 208
             GG   V I + ++  +H    + I+ E + G  L+  +++   ++F      EI R +
Sbjct: 80  --GGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDI 137
Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
              I F+H   + H D+KPEN+L  S E                        K + +K+ 
Sbjct: 138 GTAIQFLHSHNIAHRDVKPENLLYTSKE------------------------KDAVLKLT 173
Query: 269 DFGSTTYERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 325
           DFG    +   QN + +   T +Y APEV+    +   CD+WS+G I+  L  G      
Sbjct: 174 DFGFA--KETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG------ 225
Query: 326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 385
                          P   +  + +    ++ +R G+  +P    S  S           
Sbjct: 226 -------------FPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVS----------- 261
Query: 386 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                       D   L++ LL+ DPT+RLT  + + HP+  +
Sbjct: 262 -----------EDAKQLIRLLLKTDPTERLTITQFMNHPWINQ 293

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 141/343 (41%), Gaps = 84/343 (24%)
Query: 95  LTSRYKIHSK-MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKH 153
           +T  Y++  + +G G  G+VLEC+ R   +  A+K++    K R+    E++   Q +  
Sbjct: 7   VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ----EVDHHWQAS-- 60
Query: 154 DKGGNRCVQIRNWFDYRNH----ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL 208
             GG   V I + ++  +H    + I+ E + G  L+  +++   ++F      EI R +
Sbjct: 61  --GGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDI 118
Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
              I F+H   + H D+KPEN+L  S E                        K + +K+ 
Sbjct: 119 GTAIQFLHSHNIAHRDVKPENLLYTSKE------------------------KDAVLKLT 154
Query: 269 DFGSTTYERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 325
           DFG    +   QN + +   T +Y APEV+    +   CD+WS+G I+  L  G      
Sbjct: 155 DFGFA--KETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG------ 206
Query: 326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 385
                          P   +  + +    ++ +R G+  +P    S  S           
Sbjct: 207 -------------FPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVS----------- 242
Query: 386 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                       D   L++ LL+ DPT+RLT  + + HP+  +
Sbjct: 243 -----------EDAKQLIRLLLKTDPTERLTITQFMNHPWINQ 274

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 111/258 (43%), Gaps = 48/258 (18%)
Query: 174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 233
            +VFE + ++  DF  K  Y+      +R    +LL+ + + H   ++H D+KP NV++ 
Sbjct: 116 ALVFEYINNT--DF--KQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMID 171
Query: 234 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 291
             +                            +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 172 HQQ--------------------------KKLRLIDWGLAEFYHPAQEYNVRVASRYFKG 205
Query: 292 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 349
           PE+++    + Y  D+WS+GC+L  +    E  F   +N + L  + +VLG         
Sbjct: 206 PELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT-------- 257
Query: 350 VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG-DLTHLLQGLLR 408
                  Y+++  +D          I       R +N I     H    +   LL  LLR
Sbjct: 258 --EELYGYLKKYHIDLD---PHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLR 312
Query: 409 YDPTDRLTAREALRHPFF 426
           YD   RLTA+EA+ HP+F
Sbjct: 313 YDHQQRLTAKEAMEHPYF 330

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 111/258 (43%), Gaps = 48/258 (18%)
Query: 174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV 233
            +VFE + ++  DF  K  Y+      +R    +LL+ + + H   ++H D+KP NV++ 
Sbjct: 111 ALVFEYINNT--DF--KQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMID 166
Query: 234 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV--STRHYRA 291
             +                            +++ID+G   +  P Q Y V  ++R+++ 
Sbjct: 167 HQQ--------------------------KKLRLIDWGLAEFYHPAQEYNVRVASRYFKG 200
Query: 292 PEVILGLG-WTYPCDIWSVGCILVELC-TGEALFQTHENLEHLAMMERVLGPLPQHMLKR 349
           PE+++    + Y  D+WS+GC+L  +    E  F   +N + L  + +VLG         
Sbjct: 201 PELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT-------- 252
Query: 350 VDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG-DLTHLLQGLLR 408
                  Y+++  +D          I       R +N I     H    +   LL  LLR
Sbjct: 253 --EELYGYLKKYHIDLD---PHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLR 307
Query: 409 YDPTDRLTAREALRHPFF 426
           YD   RLTA+EA+ HP+F
Sbjct: 308 YDHQQRLTAKEAMEHPYF 325

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 134/337 (39%), Gaps = 81/337 (24%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAK--HDKG 156
           Y++   +G+G F  V  C +RE  +  A+KIV  + K+  +  +  E L++ A   H   
Sbjct: 26  YELCEVIGKGAFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 157 GNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPID--LVREIARQLLECIA 213
               V++   +     + +VFE + G+ L   + K     F     +     RQ+LE + 
Sbjct: 85  HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           + HD  +IH D+KPENVLL S E                         S+ +K+ DFG  
Sbjct: 145 YCHDNNIIHRDVKPENVLLASKE------------------------NSAPVKLGDFG-V 179
Query: 274 TYERPDQNYI----VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 329
             +  +   +    V T H+ APEV+    +  P D+W  G IL  L +G         L
Sbjct: 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG--------CL 231
Query: 330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM 389
                 ER+                            EG      IK   K+   Q    
Sbjct: 232 PFYGTKERLF---------------------------EGI-----IKGKYKMNPRQ---W 256
Query: 390 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
            H+  SA D   L++ +L  DP +R+T  EAL HP+ 
Sbjct: 257 SHISESAKD---LVRRMLMLDPAERITVYEALNHPWL 290

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 75.1 bits (183), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 82/363 (22%), Positives = 139/363 (38%), Gaps = 85/363 (23%)
Query: 74  GSPPWREDDKDGHYMFALGENLT-------SRYKIHSKMGEGTFGQVLECWDRERKEMVA 126
           GS P RE  +  H  F     L        S      K+GEG+ G V     R   ++VA
Sbjct: 1   GSSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVA 60
Query: 127 IKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLY 185
           +K +   K+ R   +    V+ +  +H+      V++ N +   + + +V E L G +L 
Sbjct: 61  VKKMDLRKQQRRELLFNEVVIMRDYQHEN----VVEMYNSYLVGDELWVVMEFLEGGALT 116
Query: 186 DFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS 245
           D +          + +  +   +L+ ++ +H   +IH D+K +++LL     +K+ D+  
Sbjct: 117 DIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF 173
Query: 246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCD 305
                K                        E P +  +V T ++ APE+I  L +    D
Sbjct: 174 CAQVSK------------------------EVPRRKXLVGTPYWMAPELISRLPYGPEVD 209
Query: 306 IWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW 365
           IWS+G +++E+  GE  +     L+ + M+                          R + 
Sbjct: 210 IWSLGIMVIEMVDGEPPYFNEPPLKAMKMI--------------------------RDNL 243
Query: 366 PEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 425
           P               PRL+NL        +  L   L  LL  DP  R TA E L+HPF
Sbjct: 244 P---------------PRLKNL-----HKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 283
Query: 426 FTR 428
             +
Sbjct: 284 LAK 286

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 74.7 bits (182), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 96/372 (25%), Positives = 157/372 (42%), Gaps = 76/372 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV-RGIKKYREAAMI--EIEVLQQLAKHD 154
            Y I   +G G++G V   +D+  ++ VAIK V R  +   +   I  EI +L +L    
Sbjct: 27  NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 86
Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVRE----IARQLLE 210
                 + I +     + + IV E   S L    +       PI L  E    I   LL 
Sbjct: 87  IIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKT------PIFLTEEHIKTILYNLLL 140
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY--KSSLHTPKDSSYFKRMPKSSA---- 264
              F+H+  +IH DLKP N LL     +KV D+    ++++ KD++    + ++      
Sbjct: 141 GENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPH 200
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCT----- 318
            K +    T++        V TR YRAPE+IL    +T   DIWS GCI  EL       
Sbjct: 201 NKNLKKQLTSH--------VVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252
Query: 319 ------------GEALF---------QTHE--NLEHLAMMERVLGPLPQHMLKRVDR-HA 354
                       G + F         + HE  N + L ++  ++G   +  LK +++   
Sbjct: 253 INDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEV 312
Query: 355 EKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDR 414
            KY++     +P     R+ I    K P +           + D  +LL+ +L+++P  R
Sbjct: 313 IKYIKL----FPH----RKPINLKQKYPSI-----------SDDGINLLESMLKFNPNKR 353
Query: 415 LTAREALRHPFF 426
           +T  +AL HP+ 
Sbjct: 354 ITIDQALDHPYL 365

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 119/285 (41%), Gaps = 54/285 (18%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIE 143
           EN+   Y    ++G G F  V +C ++      A K +         RG+   RE    E
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS--REDIERE 64
Query: 144 IEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVR 202
           + +L+++   +      + +   ++ +  + ++ E + G  L+DFL +    S   +   
Sbjct: 65  VSILKEIQHPN-----VITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 203 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 262
           E  +Q+L  + ++H L + H DLKPEN++L+                       + +PK 
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 263 SAIKVIDFG---STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVE 315
             IK+IDFG      +    +N I  T  + APE++    LGL      D+WS+G I   
Sbjct: 156 R-IKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYI 209
Query: 316 LCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
           L +G + F      E LA +  V               A+ ++RR
Sbjct: 210 LLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 119/285 (41%), Gaps = 54/285 (18%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIE 143
           EN+   Y    ++G G F  V +C ++      A K +         RG+   RE    E
Sbjct: 7   ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS--REDIERE 64
Query: 144 IEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVR 202
           + +L+++   +      + +   ++ +  + ++ E + G  L+DFL +    S   +   
Sbjct: 65  VSILKEIQHPN-----VITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 203 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 262
           E  +Q+L  + ++H L + H DLKPEN++L+                       + +PK 
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 263 SAIKVIDFG---STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVE 315
             IK+IDFG      +    +N I  T  + APE++    LGL      D+WS+G I   
Sbjct: 156 R-IKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYI 209
Query: 316 LCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
           L +G + F      E LA +  V               A+ ++RR
Sbjct: 210 LLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 119/285 (41%), Gaps = 54/285 (18%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIE 143
           EN+   Y    ++G G F  V +C ++      A K +         RG+   RE    E
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS--REDIERE 63
Query: 144 IEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVR 202
           + +L+++   +      + +   ++ +  + ++ E + G  L+DFL +    S   +   
Sbjct: 64  VSILKEIQHPN-----VITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 116
Query: 203 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 262
           E  +Q+L  + ++H L + H DLKPEN++L+                       + +PK 
Sbjct: 117 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 154
Query: 263 SAIKVIDFG---STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVE 315
             IK+IDFG      +    +N I  T  + APE++    LGL      D+WS+G I   
Sbjct: 155 R-IKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYI 208
Query: 316 LCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
           L +G + F      E LA +  V               A+ ++RR
Sbjct: 209 LLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 253

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 119/285 (41%), Gaps = 54/285 (18%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIE 143
           EN+   Y    ++G G F  V +C ++      A K +         RG+   RE    E
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS--REDIERE 63
Query: 144 IEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVR 202
           + +L+++   +      + +   ++ +  + ++ E + G  L+DFL +    S   +   
Sbjct: 64  VSILKEIQHPN-----VITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 116
Query: 203 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 262
           E  +Q+L  + ++H L + H DLKPEN++L+                       + +PK 
Sbjct: 117 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 154
Query: 263 SAIKVIDFG---STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVE 315
             IK+IDFG      +    +N I  T  + APE++    LGL      D+WS+G I   
Sbjct: 155 R-IKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYI 208
Query: 316 LCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
           L +G + F      E LA +  V               A+ ++RR
Sbjct: 209 LLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 253

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 119/285 (41%), Gaps = 54/285 (18%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIE 143
           EN+   Y    ++G G F  V +C ++      A K +         RG+   RE    E
Sbjct: 7   ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS--REDIERE 64
Query: 144 IEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVR 202
           + +L+++   +      + +   ++ +  + ++ E + G  L+DFL +    S   +   
Sbjct: 65  VSILKEIQHPN-----VITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 203 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 262
           E  +Q+L  + ++H L + H DLKPEN++L+                       + +PK 
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 263 SAIKVIDFG---STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVE 315
             IK+IDFG      +    +N I  T  + APE++    LGL      D+WS+G I   
Sbjct: 156 R-IKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYI 209
Query: 316 LCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
           L +G + F      E LA +  V               A+ ++RR
Sbjct: 210 LLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/337 (24%), Positives = 140/337 (41%), Gaps = 77/337 (22%)
Query: 99  YKIHSK-MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG 157
           YK+ S+ +G G  G+VL+ +++  +E  A+K+++   K R     E+E L   A      
Sbjct: 33  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVE-LHWRASQCPHI 87
Query: 158 NRCVQI-RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            R V +  N +  R  + IV E L G  L+  ++    ++F      EI + + E I ++
Sbjct: 88  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 147
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H + + H D+KPEN+L  S    K P+                    + +K+ DFG    
Sbjct: 148 HSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK- 182
Query: 276 ERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 332
           E    N + +   T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L   
Sbjct: 183 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-- 240
Query: 333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 392
                            +    +  +R G+ ++P    S  S +  M             
Sbjct: 241 -----------------ISPGMKTRIRMGQYEFPNPEWSEVSEEVKM------------- 270
Query: 393 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                    L++ LL+ +PT R+T  E + HP+  + 
Sbjct: 271 ---------LIRNLLKTEPTQRMTITEFMNHPWIMQS 298

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 119/285 (41%), Gaps = 54/285 (18%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIE 143
           EN+   Y    ++G G F  V +C ++      A K +         RG+   RE    E
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS--REDIERE 64
Query: 144 IEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVR 202
           + +L+++   +      + +   ++ +  + ++ E + G  L+DFL +    S   +   
Sbjct: 65  VSILKEIQHPN-----VITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 203 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 262
           E  +Q+L  + ++H L + H DLKPEN++L+                       + +PK 
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 263 SAIKVIDFG---STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVE 315
             IK+IDFG      +    +N I  T  + APE++    LGL      D+WS+G I   
Sbjct: 156 R-IKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYI 209
Query: 316 LCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
           L +G + F      E LA +  V               A+ ++RR
Sbjct: 210 LLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/337 (24%), Positives = 140/337 (41%), Gaps = 77/337 (22%)
Query: 99  YKIHSK-MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG 157
           YK+ S+ +G G  G+VL+ +++  +E  A+K+++   K R     E+E L   A      
Sbjct: 24  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVE-LHWRASQCPHI 78
Query: 158 NRCVQI-RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            R V +  N +  R  + IV E L G  L+  ++    ++F      EI + + E I ++
Sbjct: 79  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 138
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H + + H D+KPEN+L  S    K P+                    + +K+ DFG    
Sbjct: 139 HSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK- 173
Query: 276 ERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 332
           E    N + +   T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L   
Sbjct: 174 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-- 231
Query: 333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 392
                            +    +  +R G+ ++P    S  S +  M             
Sbjct: 232 -----------------ISPGMKTRIRMGQYEFPNPEWSEVSEEVKM------------- 261
Query: 393 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                    L++ LL+ +PT R+T  E + HP+  + 
Sbjct: 262 ---------LIRNLLKTEPTQRMTITEFMNHPWIMQS 289

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 119/285 (41%), Gaps = 54/285 (18%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIE 143
           EN+   Y    ++G G F  V +C ++      A K +         RG+   RE    E
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS--REDIERE 64
Query: 144 IEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVR 202
           + +L+++   +      + +   ++ +  + ++ E + G  L+DFL +    S   +   
Sbjct: 65  VSILKEIQHPN-----VITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 203 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 262
           E  +Q+L  + ++H L + H DLKPEN++L+                       + +PK 
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 263 SAIKVIDFG---STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVE 315
             IK+IDFG      +    +N I  T  + APE++    LGL      D+WS+G I   
Sbjct: 156 R-IKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYI 209
Query: 316 LCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
           L +G + F      E LA +  V               A+ ++RR
Sbjct: 210 LLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/337 (24%), Positives = 140/337 (41%), Gaps = 77/337 (22%)
Query: 99  YKIHSK-MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG 157
           YK+ S+ +G G  G+VL+ +++  +E  A+K+++   K R     E+E L   A      
Sbjct: 23  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVE-LHWRASQCPHI 77
Query: 158 NRCVQI-RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            R V +  N +  R  + IV E L G  L+  ++    ++F      EI + + E I ++
Sbjct: 78  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 137
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H + + H D+KPEN+L  S    K P+                    + +K+ DFG    
Sbjct: 138 HSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK- 172
Query: 276 ERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 332
           E    N + +   T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L   
Sbjct: 173 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-- 230
Query: 333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 392
                            +    +  +R G+ ++P    S  S +  M             
Sbjct: 231 -----------------ISPGMKTRIRMGQYEFPNPEWSEVSEEVKM------------- 260
Query: 393 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                    L++ LL+ +PT R+T  E + HP+  + 
Sbjct: 261 ---------LIRNLLKTEPTQRMTITEFMNHPWIMQS 288

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/337 (24%), Positives = 140/337 (41%), Gaps = 77/337 (22%)
Query: 99  YKIHSK-MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG 157
           YK+ S+ +G G  G+VL+ +++  +E  A+K+++   K R     E+E L   A      
Sbjct: 25  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVE-LHWRASQCPHI 79
Query: 158 NRCVQI-RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            R V +  N +  R  + IV E L G  L+  ++    ++F      EI + + E I ++
Sbjct: 80  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 139
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H + + H D+KPEN+L  S    K P+                    + +K+ DFG    
Sbjct: 140 HSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK- 174
Query: 276 ERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 332
           E    N + +   T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L   
Sbjct: 175 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-- 232
Query: 333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 392
                            +    +  +R G+ ++P    S  S +  M             
Sbjct: 233 -----------------ISPGMKTRIRMGQYEFPNPEWSEVSEEVKM------------- 262
Query: 393 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                    L++ LL+ +PT R+T  E + HP+  + 
Sbjct: 263 ---------LIRNLLKTEPTQRMTITEFMNHPWIMQS 290

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 119/285 (41%), Gaps = 54/285 (18%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIE 143
           EN+   Y    ++G G F  V +C ++      A K +         RG+   RE    E
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS--REDIERE 64
Query: 144 IEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVR 202
           + +L+++   +      + +   ++ +  + ++ E + G  L+DFL +    S   +   
Sbjct: 65  VSILKEIQHPN-----VITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 203 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 262
           E  +Q+L  + ++H L + H DLKPEN++L+                       + +PK 
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 263 SAIKVIDFG---STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVE 315
             IK+IDFG      +    +N I  T  + APE++    LGL      D+WS+G I   
Sbjct: 156 R-IKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYI 209
Query: 316 LCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
           L +G + F      E LA +  V               A+ ++RR
Sbjct: 210 LLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 119/285 (41%), Gaps = 54/285 (18%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIE 143
           EN+   Y    ++G G F  V +C ++      A K +         RG+   RE    E
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS--REDIERE 64
Query: 144 IEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVR 202
           + +L+++   +      + +   ++ +  + ++ E + G  L+DFL +    S   +   
Sbjct: 65  VSILKEIQHPN-----VITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 203 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 262
           E  +Q+L  + ++H L + H DLKPEN++L+                       + +PK 
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 263 SAIKVIDFG---STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVE 315
             IK+IDFG      +    +N I  T  + APE++    LGL      D+WS+G I   
Sbjct: 156 R-IKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYI 209
Query: 316 LCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
           L +G + F      E LA +  V               A+ ++RR
Sbjct: 210 LLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/336 (24%), Positives = 140/336 (41%), Gaps = 77/336 (22%)
Query: 99  YKIHSK-MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG 157
           YK+ S+ +G G  G+VL+ +++  +E  A+K+++   K R     E+E L   A      
Sbjct: 69  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVE-LHWRASQCPHI 123
Query: 158 NRCVQI-RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            R V +  N +  R  + IV E L G  L+  ++    ++F      EI + + E I ++
Sbjct: 124 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 183
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H + + H D+KPEN+L  S    K P+                    + +K+ DFG    
Sbjct: 184 HSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK- 218
Query: 276 ERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 332
           E    N + +   T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L   
Sbjct: 219 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-- 276
Query: 333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 392
                            +    +  +R G+ ++P    S  S +  M             
Sbjct: 277 -----------------ISPGMKTRIRMGQYEFPNPEWSEVSEEVKM------------- 306
Query: 393 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                    L++ LL+ +PT R+T  E + HP+  +
Sbjct: 307 ---------LIRNLLKTEPTQRMTITEFMNHPWIMQ 333

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 119/285 (41%), Gaps = 54/285 (18%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIE 143
           EN+   Y    ++G G F  V +C ++      A K +         RG+   RE    E
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS--REDIERE 64
Query: 144 IEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVR 202
           + +L+++   +      + +   ++ +  + ++ E + G  L+DFL +    S   +   
Sbjct: 65  VSILKEIQHPN-----VITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 203 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 262
           E  +Q+L  + ++H L + H DLKPEN++L+                       + +PK 
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 263 SAIKVIDFG---STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVE 315
             IK+IDFG      +    +N I  T  + APE++    LGL      D+WS+G I   
Sbjct: 156 R-IKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYI 209
Query: 316 LCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
           L +G + F      E LA +  V               A+ ++RR
Sbjct: 210 LLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/336 (24%), Positives = 140/336 (41%), Gaps = 77/336 (22%)
Query: 99  YKIHSK-MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG 157
           YK+ S+ +G G  G+VL+ +++  +E  A+K+++   K R     E+E L   A      
Sbjct: 19  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVE-LHWRASQCPHI 73
Query: 158 NRCVQI-RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            R V +  N +  R  + IV E L G  L+  ++    ++F      EI + + E I ++
Sbjct: 74  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 133
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H + + H D+KPEN+L  S    K P+                    + +K+ DFG    
Sbjct: 134 HSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK- 168
Query: 276 ERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 332
           E    N + +   T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L   
Sbjct: 169 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-- 226
Query: 333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 392
                            +    +  +R G+ ++P    S  S +  M             
Sbjct: 227 -----------------ISPGMKTRIRMGQYEFPNPEWSEVSEEVKM------------- 256
Query: 393 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                    L++ LL+ +PT R+T  E + HP+  +
Sbjct: 257 ---------LIRNLLKTEPTQRMTITEFMNHPWIMQ 283

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 80/336 (23%), Positives = 140/336 (41%), Gaps = 77/336 (22%)
Query: 99  YKIHSK-MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG 157
           YK+ S+ +G G  G+VL+ +++  +E  A+K+++   K R     E+E L   A      
Sbjct: 63  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVE-LHWRASQCPHI 117
Query: 158 NRCVQI-RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            R V +  N +  R  + IV E L G  L+  ++    ++F      EI + + E I ++
Sbjct: 118 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 177
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H + + H D+KPEN+L  S    K P+                    + +K+ DFG    
Sbjct: 178 HSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK- 212
Query: 276 ERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 332
           E    N + +   T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L   
Sbjct: 213 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-- 270
Query: 333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 392
                            +    +  +R G+ ++P    S  S                  
Sbjct: 271 -----------------ISPGMKTRIRMGQYEFPNPEWSEVS------------------ 295
Query: 393 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                ++  L++ LL+ +PT R+T  E + HP+  +
Sbjct: 296 ----EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 327

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 119/285 (41%), Gaps = 54/285 (18%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIE 143
           EN+   Y    ++G G F  V +C ++      A K +         RG+   RE    E
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS--REDIERE 64
Query: 144 IEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVR 202
           + +L+++   +      + +   ++ +  + ++ E + G  L+DFL +    S   +   
Sbjct: 65  VSILKEIQHPN-----VITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 203 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 262
           E  +Q+L  + ++H L + H DLKPEN++L+                       + +PK 
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 263 SAIKVIDFG---STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVE 315
             IK+IDFG      +    +N I  T  + APE++    LGL      D+WS+G I   
Sbjct: 156 R-IKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYI 209
Query: 316 LCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
           L +G + F      E LA +  V               A+ ++RR
Sbjct: 210 LLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/337 (24%), Positives = 140/337 (41%), Gaps = 77/337 (22%)
Query: 99  YKIHSK-MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG 157
           YK+ S+ +G G  G+VL+ +++  +E  A+K+++   K R     E+E L   A      
Sbjct: 18  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVE-LHWRASQCPHI 72
Query: 158 NRCVQI-RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            R V +  N +  R  + IV E L G  L+  ++    ++F      EI + + E I ++
Sbjct: 73  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 132
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H + + H D+KPEN+L  S    K P+                    + +K+ DFG    
Sbjct: 133 HSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK- 167
Query: 276 ERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 332
           E    N + +   T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L   
Sbjct: 168 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-- 225
Query: 333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 392
                            +    +  +R G+ ++P    S  S +  M             
Sbjct: 226 -----------------ISPGMKTRIRMGQYEFPNPEWSEVSEEVKM------------- 255
Query: 393 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                    L++ LL+ +PT R+T  E + HP+  + 
Sbjct: 256 ---------LIRNLLKTEPTQRMTITEFMNHPWIMQS 283

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/336 (24%), Positives = 140/336 (41%), Gaps = 77/336 (22%)
Query: 99  YKIHSK-MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG 157
           YK+ S+ +G G  G+VL+ +++  +E  A+K+++   K R     E+E L   A      
Sbjct: 17  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVE-LHWRASQCPHI 71
Query: 158 NRCVQI-RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            R V +  N +  R  + IV E L G  L+  ++    ++F      EI + + E I ++
Sbjct: 72  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 131
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H + + H D+KPEN+L  S    K P+                    + +K+ DFG    
Sbjct: 132 HSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK- 166
Query: 276 ERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 332
           E    N + +   T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L   
Sbjct: 167 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-- 224
Query: 333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 392
                            +    +  +R G+ ++P    S  S +  M             
Sbjct: 225 -----------------ISPGMKTRIRMGQYEFPNPEWSEVSEEVKM------------- 254
Query: 393 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                    L++ LL+ +PT R+T  E + HP+  +
Sbjct: 255 ---------LIRNLLKTEPTQRMTITEFMNHPWIMQ 281

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 119/279 (42%), Gaps = 54/279 (19%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQ 149
           Y I  ++G G F  V +C ++      A K +         RG+   RE    E+ +L+Q
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVS--REEIEREVSILRQ 71
Query: 150 LAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL 208
           +  H+      + + + ++ R  + ++ E + G  L+DFL +    S   +      +Q+
Sbjct: 72  VLHHN-----VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQI 124
Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
           L+ + ++H   + H DLKPEN++L+    I +P                       IK+I
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLI 161
Query: 269 DFGSTTYERPDQ---NYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEA 321
           DFG   +E  D      I  T  + APE++    LGL      D+WS+G I   L +G +
Sbjct: 162 DFG-LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGAS 216
Query: 322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
            F      E LA +  V     +    +    A+ ++R+
Sbjct: 217 PFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRK 255

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 81/336 (24%), Positives = 140/336 (41%), Gaps = 77/336 (22%)
Query: 99  YKIHSK-MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG 157
           YK+ S+ +G G  G+VL+ +++  +E  A+K+++   K R     E+E L   A      
Sbjct: 19  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVE-LHWRASQCPHI 73
Query: 158 NRCVQI-RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            R V +  N +  R  + IV E L G  L+  ++    ++F      EI + + E I ++
Sbjct: 74  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 133
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H + + H D+KPEN+L  S    K P+                    + +K+ DFG    
Sbjct: 134 HSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK- 168
Query: 276 ERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 332
           E    N + +   T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L   
Sbjct: 169 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-- 226
Query: 333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 392
                            +    +  +R G+ ++P    S  S +  M             
Sbjct: 227 -----------------ISPGMKTRIRMGQYEFPNPEWSEVSEEVKM------------- 256
Query: 393 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                    L++ LL+ +PT R+T  E + HP+  +
Sbjct: 257 ---------LIRNLLKTEPTQRMTITEFMNHPWIMQ 283

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 116/275 (42%), Gaps = 46/275 (16%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQ 149
           Y I  ++G G F  V +C ++      A K +         RG+   RE    E+ +L+Q
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVS--REEIEREVSILRQ 71
Query: 150 LAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL 208
           +  H+      + + + ++ R  + ++ E + G  L+DFL +    S   +      +Q+
Sbjct: 72  VLHHN-----VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQI 124
Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
           L+ + ++H   + H DLKPEN++L+    I +P                       IK+I
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLI 161
Query: 269 DFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 325
           DFG   +E  D      I  T  + APE++         D+WS+G I   L +G + F  
Sbjct: 162 DFG-LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
Query: 326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
               E LA +  V     +    +    A+ ++R+
Sbjct: 221 DTKQETLANITAVSYDFDEEFFSQTSELAKDFIRK 255

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 118/279 (42%), Gaps = 54/279 (19%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQ 149
           Y I  ++G G F  V +C ++      A K +         RG+   RE    E+ +L+Q
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVS--REEIEREVSILRQ 71
Query: 150 LAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL 208
           +  H+      + + + ++ R  + ++ E + G  L+DFL +    S   +      +Q+
Sbjct: 72  VLHHN-----VITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQI 124
Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
           L+ + ++H   + H DLKPEN++L+    I +P                       IK+I
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLI 161
Query: 269 DFGSTTYERPDQ---NYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEA 321
           DFG   +E  D      I  T  + APE++    LGL      D+WS+G I   L +G +
Sbjct: 162 DFG-LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGAS 216
Query: 322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
            F      E LA +  V     +         A+ ++R+
Sbjct: 217 PFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRK 255

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 32/223 (14%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           + +  K+GEG++G V +   +E  ++VAIK V  ++   +  + EI ++QQ         
Sbjct: 31  FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV-PVESDLQEIIKEISIMQQC-----DSP 84
Query: 159 RCVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             V+    +     + IV E  G+ S+ D +R  N ++   D +  I +  L+ + ++H 
Sbjct: 85  HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHF 143
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
           +  IH D+K  N+LL +  + K+ D+  +                        G  T   
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGVA------------------------GQLTDXM 179
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 320
             +N ++ T  + APEVI  +G+    DIWS+G   +E+  G+
Sbjct: 180 AKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 109/236 (46%), Gaps = 42/236 (17%)
Query: 92  GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREAAM-IEIEVLQQ 149
            E++   Y     +G G F +V+   D+  +++VAIK I +   + +E +M  EI VL +
Sbjct: 13  AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHK 72
Query: 150 LAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIAR-- 206
           + KH       V + + ++   H+ ++ + + G  L+D + +  + +      R+ +R  
Sbjct: 73  I-KH----PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT-----ERDASRLI 122
Query: 207 -QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 265
            Q+L+ + ++HDL ++H DLKPEN+L  S                        + + S I
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYS------------------------LDEDSKI 158
Query: 266 KVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
            + DFG +  E P    +    T  Y APEV+    ++   D WS+G I   L  G
Sbjct: 159 MISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/337 (22%), Positives = 132/337 (39%), Gaps = 84/337 (24%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           Y +   +G G++ +   C  +      A+K+   I K +     EIE+L +  +H     
Sbjct: 29  YVVKETIGVGSYSECKRCVHKATNMEYAVKV---IDKSKRDPSEEIEILLRYGQHPN--- 82
Query: 159 RCVQIRNWFDYRNHICIVFEKL-GSSLYD-FLRKNNYRSFPIDLVREIARQLLECIAFMH 216
             + +++ +D   H+ +V E + G  L D  LR+  +       V     + +E   ++H
Sbjct: 83  -IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVE---YLH 138
Query: 217 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 276
              ++H DLKP N+L                       Y         +++ DFG     
Sbjct: 139 SQGVVHRDLKPSNIL-----------------------YVDESGNPECLRICDFGFAKQL 175
Query: 277 RPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 333
           R +   +++   T ++ APEV+   G+   CDIWS+G +L  +  G   F          
Sbjct: 176 RAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN-------- 227
Query: 334 MMERVLGP--LPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH 391
                 GP   P+ +L R+   + K+   G  +W                          
Sbjct: 228 ------GPSDTPEEILTRIG--SGKFTLSGG-NW------------------------NT 254
Query: 392 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           V  +A D   L+  +L  DP  RLTA++ L+HP+ T+
Sbjct: 255 VSETAKD---LVSKMLHVDPHQRLTAKQVLQHPWVTQ 288

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/326 (22%), Positives = 129/326 (39%), Gaps = 78/326 (23%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+GEG+ G V     R   ++VA+K +   K+ R   +    V+ +  +H+      V++
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN----VVEM 213
Query: 164 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
            N +   + + +V E L G +L D +          + +  +   +L+ ++ +H   +IH
Sbjct: 214 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIH 270
Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
            D+K +++LL     +K+ D+       K                        E P +  
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFCAQVSK------------------------EVPRRKX 306
Query: 283 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 342
           +V T ++ APE+I  L +    DIWS+G +++E+  GE  +     L+ + M+       
Sbjct: 307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI------- 359
Query: 343 PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL 402
                              R + P               PRL+NL        +  L   
Sbjct: 360 -------------------RDNLP---------------PRLKNL-----HKVSPSLKGF 380
Query: 403 LQGLLRYDPTDRLTAREALRHPFFTR 428
           L  LL  DP  R TA E L+HPF  +
Sbjct: 381 LDRLLVRDPAQRATAAELLKHPFLAK 406

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 119/285 (41%), Gaps = 54/285 (18%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIE 143
           EN+   Y    ++G G F  V +C ++      A K +         RG+   RE    E
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS--REDIERE 64
Query: 144 IEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVR 202
           + +L+++   +      + +   ++ +  + ++ E + G  L+DFL +    S   +   
Sbjct: 65  VSILKEIQHPN-----VITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 203 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 262
           E  +Q+L  + ++H L + H DLKPEN++L+                       + +PK 
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 263 SAIKVIDFG---STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVE 315
             IK+IDFG      +    +N I  T  + APE++    LGL      D+WS+G I   
Sbjct: 156 R-IKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYI 209
Query: 316 LCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
           L +G + F      E LA +  V               A+ ++RR
Sbjct: 210 LLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/337 (22%), Positives = 132/337 (39%), Gaps = 84/337 (24%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           Y +   +G G++ +   C  +      A+K+   I K +     EIE+L +  +H     
Sbjct: 29  YVVKETIGVGSYSECKRCVHKATNMEYAVKV---IDKSKRDPSEEIEILLRYGQHP---- 81
Query: 159 RCVQIRNWFDYRNHICIVFEKL-GSSLYD-FLRKNNYRSFPIDLVREIARQLLECIAFMH 216
             + +++ +D   H+ +V E + G  L D  LR+  +       V     + +E   ++H
Sbjct: 82  NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVE---YLH 138
Query: 217 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 276
              ++H DLKP N+L                       Y         +++ DFG     
Sbjct: 139 SQGVVHRDLKPSNIL-----------------------YVDESGNPECLRICDFGFAKQL 175
Query: 277 RPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 333
           R +   +++   T ++ APEV+   G+   CDIWS+G +L  +  G   F          
Sbjct: 176 RAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN-------- 227
Query: 334 MMERVLGP--LPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH 391
                 GP   P+ +L R+   + K+   G  +W                          
Sbjct: 228 ------GPSDTPEEILTRIG--SGKFTLSGG-NW------------------------NT 254
Query: 392 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           V  +A D   L+  +L  DP  RLTA++ L+HP+ T+
Sbjct: 255 VSETAKD---LVSKMLHVDPHQRLTAKQVLQHPWVTQ 288

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 119/285 (41%), Gaps = 54/285 (18%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIE 143
           EN+   Y    ++G G F  V +C ++      A K +         RG+   RE    E
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS--REDIERE 64
Query: 144 IEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVR 202
           + +L+++   +      + +   ++ +  + ++ E + G  L+DFL +    S   +   
Sbjct: 65  VSILKEIQHPN-----VITLHEVYENKTDVILIGELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 203 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 262
           E  +Q+L  + ++H L + H DLKPEN++L+                       + +PK 
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 263 SAIKVIDFG---STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVE 315
             IK+IDFG      +    +N I  T  + APE++    LGL      D+WS+G I   
Sbjct: 156 R-IKIIDFGLAHKIDFGNEFKN-IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYI 209
Query: 316 LCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
           L +G + F      E LA +  V               A+ ++RR
Sbjct: 210 LLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 115/275 (41%), Gaps = 46/275 (16%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQ 149
           Y I  ++G G F  V +C ++      A K +         RG+   RE    E+ +L+Q
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVS--REEIEREVSILRQ 71
Query: 150 LAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL 208
           +  H+      + + + ++ R  + ++ E + G  L+DFL +    S   +      +Q+
Sbjct: 72  VLHHN-----VITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQI 124
Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
           L+ + ++H   + H DLKPEN++L+    I +P                       IK+I
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLI 161
Query: 269 DFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 325
           DFG   +E  D      I  T  + APE++         D+WS+G I   L +G + F  
Sbjct: 162 DFG-LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
Query: 326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
               E LA +  V     +         A+ ++R+
Sbjct: 221 DTKQETLANITSVSYDFDEEFFSHTSELAKDFIRK 255

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 81/336 (24%), Positives = 139/336 (41%), Gaps = 77/336 (22%)
Query: 99  YKIHSK-MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG 157
           YK+ S+ +G G  G+VL+ +++  +E  A+K+++   K R     E+E L   A      
Sbjct: 17  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVE-LHWRASQCPHI 71
Query: 158 NRCVQI-RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            R V +  N +  R  + IV E L G  L+  ++    ++F      EI + + E I ++
Sbjct: 72  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 131
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H + + H D+KPEN+L  S    K P+                    + +K+ DFG    
Sbjct: 132 HSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK- 166
Query: 276 ERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 332
           E    N +     T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L   
Sbjct: 167 ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-- 224
Query: 333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 392
                            +    +  +R G+ ++P    S  S +  M             
Sbjct: 225 -----------------ISPGMKTRIRMGQYEFPNPEWSEVSEEVKM------------- 254
Query: 393 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                    L++ LL+ +PT R+T  E + HP+  +
Sbjct: 255 ---------LIRNLLKTEPTQRMTITEFMNHPWIMQ 281

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 118/279 (42%), Gaps = 54/279 (19%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQ 149
           Y I  ++G G F  V +C ++      A K +         RG+   RE    E+ +L+Q
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVS--REEIEREVSILRQ 71
Query: 150 LAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL 208
           +  H+      + + + ++ R  + ++ E + G  L+DFL +    S   +      +Q+
Sbjct: 72  VLHHN-----VITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQI 124
Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
           L+ + ++H   + H DLKPEN++L+    I +P                       IK+I
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLI 161
Query: 269 DFGSTTYERPDQ---NYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEA 321
           DFG   +E  D      I  T  + APE++    LGL      D+WS+G I   L +G +
Sbjct: 162 DFG-LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGAS 216
Query: 322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
            F      E LA +  V     +         A+ ++R+
Sbjct: 217 PFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRK 255

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 74/338 (21%), Positives = 128/338 (37%), Gaps = 82/338 (24%)
Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD 154
            T  Y++   +G G++     C  +      A+KI   I K +     EIE+L +  +H 
Sbjct: 20  FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKI---IDKSKRDPTEEIEILLRYGQHP 76
Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                 + +++ +D   ++ +V E + G  L D + +  +  F       +   + + + 
Sbjct: 77  N----IITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF--FSEREASAVLFTITKTVE 130
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H   ++H DLKP N+L                       Y        +I++ DFG  
Sbjct: 131 YLHAQGVVHRDLKPSNIL-----------------------YVDESGNPESIRICDFGFA 167
Query: 274 TYERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
              R +   +++   T ++ APEV+   G+   CDIWS+G +L  + TG   F       
Sbjct: 168 KQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFAN----- 222
Query: 331 HLAMMERVLGP--LPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 388
                    GP   P+ +L R+          G+     G                    
Sbjct: 223 ---------GPDDTPEEILARIG--------SGKFSLSGG-------------------Y 246
Query: 389 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
              V  +A D   L+  +L  DP  RLTA   LRHP+ 
Sbjct: 247 WNSVSDTAKD---LVSKMLHVDPHQRLTAALVLRHPWI 281

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 119/285 (41%), Gaps = 54/285 (18%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIE 143
           EN+   Y    ++G G F  V +C ++      A K +         RG+   RE    E
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVS--REDIERE 64
Query: 144 IEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVR 202
           + +L+++   +      + +   ++ +  + ++ E + G  L+DFL +    S   +   
Sbjct: 65  VSILKEIQHPN-----VITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEAT 117
Query: 203 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 262
           E  +Q+L  + ++H L + H DLKPEN++L+                       + +PK 
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKP 155
Query: 263 SAIKVIDFG---STTYERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVE 315
             IK+IDFG      +    +N I  T  + APE++    LGL      D+WS+G I   
Sbjct: 156 R-IKIIDFGLAHKIDFGNEFKN-IFGTPAFVAPEIVNYEPLGL----EADMWSIGVITYI 209
Query: 316 LCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
           L +G + F      E LA +  V               A+ ++RR
Sbjct: 210 LLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 73/326 (22%), Positives = 129/326 (39%), Gaps = 78/326 (23%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+GEG+ G V     R   ++VA+K +   K+ R   +    V+ +  +H+      V++
Sbjct: 81  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN----VVEM 136
Query: 164 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
            N +   + + +V E L G +L D +          + +  +   +L+ ++ +H   +IH
Sbjct: 137 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIH 193
Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
            D+K +++LL     +K+ D+       K                        E P +  
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFCAQVSK------------------------EVPRRKX 229
Query: 283 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 342
           +V T ++ APE+I  L +    DIWS+G +++E+  GE  +     L+ + M+       
Sbjct: 230 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI------- 282
Query: 343 PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL 402
                              R + P               PRL+NL        +  L   
Sbjct: 283 -------------------RDNLP---------------PRLKNL-----HKVSPSLKGF 303
Query: 403 LQGLLRYDPTDRLTAREALRHPFFTR 428
           L  LL  DP  R TA E L+HPF  +
Sbjct: 304 LDRLLVRDPAQRATAAELLKHPFLAK 329

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 109/236 (46%), Gaps = 42/236 (17%)
Query: 92  GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREAAM-IEIEVLQQ 149
            E++   Y     +G G F +V+   D+  +++VAIK I +   + +E +M  EI VL +
Sbjct: 13  AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK 72
Query: 150 LAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIAR-- 206
           + KH       V + + ++   H+ ++ + + G  L+D + +  + +      R+ +R  
Sbjct: 73  I-KH----PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT-----ERDASRLI 122
Query: 207 -QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 265
            Q+L+ + ++HDL ++H DLKPEN+L  S                        + + S I
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYS------------------------LDEDSKI 158
Query: 266 KVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
            + DFG +  E P    +    T  Y APEV+    ++   D WS+G I   L  G
Sbjct: 159 MISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 80/346 (23%), Positives = 139/346 (40%), Gaps = 87/346 (25%)
Query: 92  GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREAAM-IEIEVLQQ 149
            E++   Y     +G G F +V+   D+  +++VAIK I +   + +E +M  EI VL +
Sbjct: 13  AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK 72
Query: 150 LAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIAR-- 206
           + KH       V + + ++   H+ ++ + + G  L+D + +  + +      R+ +R  
Sbjct: 73  I-KH----PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT-----ERDASRLI 122
Query: 207 -QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 265
            Q+L+ + ++HDL ++H DLKPEN+L  S                        + + S I
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYS------------------------LDEDSKI 158
Query: 266 KVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 323
            + DFG +  E P    +    T  Y APEV+    ++   D WS+G I   L  G   F
Sbjct: 159 MISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
               +             L + +LK        Y       W +                
Sbjct: 219 YDEND-----------AKLFEQILKAEYEFDSPY-------WDD---------------- 244
Query: 384 LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                   +  SA D    ++ L+  DP  R T  +AL+HP+   D
Sbjct: 245 --------ISDSAKD---FIRHLMEKDPEKRFTCEQALQHPWIAGD 279

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 109/236 (46%), Gaps = 42/236 (17%)
Query: 92  GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREAAM-IEIEVLQQ 149
            E++   Y     +G G F +V+   D+  +++VAIK I +   + +E +M  EI VL +
Sbjct: 13  AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK 72
Query: 150 LAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIAR-- 206
           + KH       V + + ++   H+ ++ + + G  L+D + +  + +      R+ +R  
Sbjct: 73  I-KH----PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT-----ERDASRLI 122
Query: 207 -QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 265
            Q+L+ + ++HDL ++H DLKPEN+L  S                        + + S I
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYS------------------------LDEDSKI 158
Query: 266 KVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
            + DFG +  E P    +    T  Y APEV+    ++   D WS+G I   L  G
Sbjct: 159 MISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 127/303 (41%), Gaps = 64/303 (21%)
Query: 74  GSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--- 130
           G   +R++D + HY   +GE L          G G F  V +C  +   +  A K +   
Sbjct: 1   GMSTFRQEDVEDHY--EMGEEL----------GSGQFAIVRKCRQKGTGKEYAAKFIKKR 48
Query: 131 ------RGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSS 183
                 RG+   RE    E+ +L+++ +H       + + + F+ +  + ++ E + G  
Sbjct: 49  RLSSSRRGVS--REEIEREVNILREI-RHPN----IITLHDIFENKTDVVLILELVSGGE 101
Query: 184 LYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY 243
           L+DFL +    S   D   +  +Q+L+ + ++H   + H DLKPEN++L+      VP+ 
Sbjct: 102 LFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDK---NVPN- 155
Query: 244 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY--IVSTRHYRAPEVI----LG 297
                 P+             IK+IDFG          +  I  T  + APE++    LG
Sbjct: 156 ------PR-------------IKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLG 196
Query: 298 LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKY 357
           L      D+WS+G I   L +G + F      E L  +  V     +         A+ +
Sbjct: 197 L----EADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDF 252
Query: 358 VRR 360
           +RR
Sbjct: 253 IRR 255

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/326 (22%), Positives = 129/326 (39%), Gaps = 78/326 (23%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+GEG+ G V     R   ++VA+K +   K+ R   +    V+ +  +H+      V++
Sbjct: 36  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN----VVEM 91
Query: 164 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
            N +   + + +V E L G +L D +          + +  +   +L+ ++ +H   +IH
Sbjct: 92  YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIH 148
Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
            D+K +++LL     +K+ D+       K                        E P +  
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCAQVSK------------------------EVPRRKX 184
Query: 283 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 342
           +V T ++ APE+I  L +    DIWS+G +++E+  GE  +     L+ + M+       
Sbjct: 185 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI------- 237
Query: 343 PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL 402
                              R + P               PRL+NL        +  L   
Sbjct: 238 -------------------RDNLP---------------PRLKNL-----HKVSPSLKGF 258
Query: 403 LQGLLRYDPTDRLTAREALRHPFFTR 428
           L  LL  DP  R TA E L+HPF  +
Sbjct: 259 LDRLLVRDPAQRATAAELLKHPFLAK 284

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/326 (22%), Positives = 129/326 (39%), Gaps = 78/326 (23%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+GEG+ G V     R   ++VA+K +   K+ R   +    V+ +  +H+      V++
Sbjct: 31  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN----VVEM 86
Query: 164 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
            N +   + + +V E L G +L D +          + +  +   +L+ ++ +H   +IH
Sbjct: 87  YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIH 143
Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
            D+K +++LL     +K+ D+       K                        E P +  
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCAQVSK------------------------EVPRRKX 179
Query: 283 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 342
           +V T ++ APE+I  L +    DIWS+G +++E+  GE  +     L+ + M+       
Sbjct: 180 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI------- 232
Query: 343 PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL 402
                              R + P               PRL+NL        +  L   
Sbjct: 233 -------------------RDNLP---------------PRLKNL-----HKVSPSLKGF 253
Query: 403 LQGLLRYDPTDRLTAREALRHPFFTR 428
           L  LL  DP  R TA E L+HPF  +
Sbjct: 254 LDRLLVRDPAQRATAAELLKHPFLAK 279

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/326 (22%), Positives = 129/326 (39%), Gaps = 78/326 (23%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+GEG+ G V     R   ++VA+K +   K+ R   +    V+ +  +H+      V++
Sbjct: 27  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN----VVEM 82
Query: 164 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
            N +   + + +V E L G +L D +          + +  +   +L+ ++ +H   +IH
Sbjct: 83  YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIH 139
Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
            D+K +++LL     +K+ D+       K                        E P +  
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSK------------------------EVPRRKX 175
Query: 283 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 342
           +V T ++ APE+I  L +    DIWS+G +++E+  GE  +     L+ + M+       
Sbjct: 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI------- 228
Query: 343 PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL 402
                              R + P               PRL+NL        +  L   
Sbjct: 229 -------------------RDNLP---------------PRLKNL-----HKVSPSLKGF 249
Query: 403 LQGLLRYDPTDRLTAREALRHPFFTR 428
           L  LL  DP  R TA E L+HPF  +
Sbjct: 250 LDRLLVRDPAQRATAAELLKHPFLAK 275

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/324 (23%), Positives = 127/324 (39%), Gaps = 78/324 (24%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+GEG+ G V    ++   + VA+K +   K+ R   +    V+ +   HD      V +
Sbjct: 52  KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDN----VVDM 107
Query: 164 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
            + +   + + +V E L G +L D +          + +  +   +L  ++++H+  +IH
Sbjct: 108 YSSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIATVCLSVLRALSYLHNQGVIH 164
Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
            D+K +++LL S   IK+ D+       K                        E P +  
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCAQVSK------------------------EVPKRKX 200
Query: 283 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 342
           +V T ++ APEVI  L +    DIWS+G +++E+  GE     + N   L  M R+   L
Sbjct: 201 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEP---PYFNEPPLQAMRRIRDSL 257
Query: 343 PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL 402
           P  +    D H    V RG LD                                      
Sbjct: 258 PPRV---KDLHKVSSVLRGFLDL------------------------------------- 277
Query: 403 LQGLLRYDPTDRLTAREALRHPFF 426
              +L  +P+ R TA+E L HPF 
Sbjct: 278 ---MLVREPSQRATAQELLGHPFL 298

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 135/341 (39%), Gaps = 81/341 (23%)
Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEV-LQQLA 151
           ++T  Y+++  +G+G F  V  C         A KI+   K   R+   +E E  + +L 
Sbjct: 1   SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
           KH    +  V++ +         +VF+ + G  L++ +    Y S   D    I +Q+LE
Sbjct: 61  KH----SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS-EADASHCI-QQILE 114
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            +   H + ++H DLKPEN+LL S                          K +A+K+ DF
Sbjct: 115 AVLHCHQMGVVHRDLKPENLLLASK------------------------CKGAAVKLADF 150
Query: 271 GSTTYERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 327
           G     + DQ        T  Y +PEV+    +  P DIW+ G IL  L  G   F   +
Sbjct: 151 GLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDED 210
Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
                           QH L        + ++ G  D+P       S +     P  +NL
Sbjct: 211 ----------------QHKLY-------QQIKAGAYDFP-------SPEWDTVTPEAKNL 240
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           I Q               +L  +P  R+TA EAL+HP+  +
Sbjct: 241 INQ---------------MLTINPAKRITAHEALKHPWVCQ 266

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/347 (22%), Positives = 130/347 (37%), Gaps = 93/347 (26%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV----------RGIKKYREAAMIEIEVLQ 148
           Y+    +G G    V  C  +   +  A+KI+            +++ REA + E+++L+
Sbjct: 19  YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQ 207
           +++ H       +Q+++ ++      +VF+ +    L+D+L +    +      R+I R 
Sbjct: 79  KVSGHPN----IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRA 132
Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           LLE I  +H L ++H DLKPEN+LL     IK+ D+  S                     
Sbjct: 133 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ------------------- 173
Query: 268 IDFGSTTYERPDQNYIVSTRHYRAPEVILGL------GWTYPCDIWSVGCILVELCTGEA 321
           +D G    E      +  T  Y APE+I         G+    D+WS G I+  L  G  
Sbjct: 174 LDPGEKLRE------VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSP 227
Query: 322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL 381
            F   + +  L M+                       + G  +W                
Sbjct: 228 PFWHRKQMLMLRMI------------------MSGNYQFGSPEW---------------- 253
Query: 382 PRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                      D  +  +  L+   L   P  R TA EAL HPFF +
Sbjct: 254 -----------DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 43/226 (19%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR-----EAAMIEIEVLQQLAKHDKGGN 158
           K+G G FG V    +R        ++++ I K R     E    EIEVL+ L   +    
Sbjct: 29  KLGSGAFGDVHLVEERSSG---LERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN---- 81
Query: 159 RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPID--LVREIARQLLECIAFM 215
             ++I   F+  +++ IV E   G  L + +     R   +    V E+ +Q++  +A+ 
Sbjct: 82  -IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H   ++H DLKPEN+L             +S H+P              IK+IDFG    
Sbjct: 141 HSQHVVHKDLKPENILF----------QDTSPHSP--------------IKIIDFGLAEL 176
Query: 276 ERPDQNYI--VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
            + D++      T  Y APEV      T+ CDIWS G ++  L TG
Sbjct: 177 FKSDEHSTNAAGTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLTG 221

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/347 (22%), Positives = 130/347 (37%), Gaps = 93/347 (26%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV----------RGIKKYREAAMIEIEVLQ 148
           Y+    +G G    V  C  +   +  A+KI+            +++ REA + E+++L+
Sbjct: 6   YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 65
Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQ 207
           +++ H       +Q+++ ++      +VF+ +    L+D+L +    +      R+I R 
Sbjct: 66  KVSGHP----NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRA 119
Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           LLE I  +H L ++H DLKPEN+LL     IK+ D+  S                     
Sbjct: 120 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ------------------- 160
Query: 268 IDFGSTTYERPDQNYIVSTRHYRAPEVILGL------GWTYPCDIWSVGCILVELCTGEA 321
           +D G    E      +  T  Y APE+I         G+    D+WS G I+  L  G  
Sbjct: 161 LDPGEKLRE------VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSP 214
Query: 322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL 381
            F   + +  L M+                       + G  +W                
Sbjct: 215 PFWHRKQMLMLRMI------------------MSGNYQFGSPEW---------------- 240
Query: 382 PRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                      D  +  +  L+   L   P  R TA EAL HPFF +
Sbjct: 241 -----------DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 105/225 (46%), Gaps = 34/225 (15%)
Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEV-LQQLAKH 153
             Y+I   +GEG+FG+V   +     + VA+KI+  + + K      IE E+   +L +H
Sbjct: 8   GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 67
Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                  +++ +    ++ I +V E  G+ L+D++ + +  S      R   +Q++  + 
Sbjct: 68  P----HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE--QEARRFFQQIISAVE 121
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           + H   ++H DLKPEN+LL     +K+ D+  S +   D ++ K             GS 
Sbjct: 122 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT----------SCGSP 170
Query: 274 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL-VELC 317
            Y  P+   ++S + Y  PEV          D+WS G IL V LC
Sbjct: 171 NYAAPE---VISGKLYAGPEV----------DVWSCGVILYVMLC 202

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/342 (22%), Positives = 141/342 (41%), Gaps = 87/342 (25%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAK 152
           + L+  +++ S++G G    V  C  +  ++  A+K+++     ++    EI VL +L+ 
Sbjct: 49  DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD-KKIVRTEIGVLLRLSH 107
Query: 153 HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIA---RQL 208
            +      ++++  F+    I +V E + G  L+D + +  Y S      R+ A   +Q+
Sbjct: 108 PN-----IIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYS-----ERDAADAVKQI 157
Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
           LE +A++H+  ++H DLKPEN+L  +      PD                    + +K+ 
Sbjct: 158 LEAVAYLHENGIVHRDLKPENLLYATP----APD--------------------APLKIA 193
Query: 269 DFGSTTY--ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL-VELCTGEALFQT 325
           DFG +     +     +  T  Y APE++ G  +    D+WSVG I  + LC  E  +  
Sbjct: 194 DFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDE 253
Query: 326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 385
             +               Q M +R+  + E Y                            
Sbjct: 254 RGD---------------QFMFRRI-LNCEYY---------------------------- 269
Query: 386 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
             I    D  + +   L++ L+  DP  RLT  +AL+HP+ T
Sbjct: 270 -FISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVT 310

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 105/225 (46%), Gaps = 34/225 (15%)
Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEV-LQQLAKH 153
             Y+I   +GEG+FG+V   +     + VA+KI+  + + K      IE E+   +L +H
Sbjct: 13  GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 72
Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                  +++ +    ++ I +V E  G+ L+D++ + +  S      R   +Q++  + 
Sbjct: 73  P----HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE--QEARRFFQQIISAVE 126
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           + H   ++H DLKPEN+LL     +K+ D+  S +   D ++ K             GS 
Sbjct: 127 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT----------SCGSP 175
Query: 274 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL-VELC 317
            Y  P+   ++S + Y  PEV          D+WS G IL V LC
Sbjct: 176 NYAAPE---VISGKLYAGPEV----------DVWSCGVILYVMLC 207

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 105/225 (46%), Gaps = 34/225 (15%)
Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEV-LQQLAKH 153
             Y+I   +GEG+FG+V   +     + VA+KI+  + + K      IE E+   +L +H
Sbjct: 14  GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 73
Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                  +++ +    ++ I +V E  G+ L+D++ + +  S      R   +Q++  + 
Sbjct: 74  P----HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE--QEARRFFQQIISAVE 127
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           + H   ++H DLKPEN+LL     +K+ D+  S +   D ++ K             GS 
Sbjct: 128 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT----------SCGSP 176
Query: 274 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL-VELC 317
            Y  P+   ++S + Y  PEV          D+WS G IL V LC
Sbjct: 177 NYAAPE---VISGKLYAGPEV----------DVWSCGVILYVMLC 208

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 94/374 (25%), Positives = 153/374 (40%), Gaps = 77/374 (20%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV-RGIKKYREAAMI--EIEVLQQLAKHD 154
            Y+I   +G G++G V   +D+   + VAIK V R  +   +   I  EI +L +L    
Sbjct: 29  NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 88
Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDL----VREIARQLLE 210
                 + I       + + IV E   S L    +       PI L    V+ I   LL 
Sbjct: 89  IIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKT------PIFLTEQHVKTILYNLLL 142
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY--KSSLHTPKDSSYFKRMPKSSAIKVI 268
              F+H+  +IH DLKP N LL     +K+ D+    ++++ KD      + +    +  
Sbjct: 143 GEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEP 202
Query: 269 DFGSTTYERPDQNYIVSTRHYRAPEVI-LGLGWTYPCDIWSVGCILVELCT--------- 318
              +   ++   +++V TR YRAPE+I L   +T   DIWS GCI  EL           
Sbjct: 203 GPHNKNLKKQLTSHVV-TRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNP 261
Query: 319 --------GEALF---------QTHE--NLEHLAMMERVLGPLPQHMLKRVDRH-AEKYV 358
                   G + F         + HE  N + L ++  V+G  P+  LK + +    KY+
Sbjct: 262 TNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYI 321
Query: 359 R----RGRLDWPE--GAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPT 412
           +    R  +D  +   + S+E I                          LL+ +LR++  
Sbjct: 322 KLFPTRDGIDLSKKYSSISKEGID-------------------------LLESMLRFNAQ 356
Query: 413 DRLTAREALRHPFF 426
            R+T  +AL HP+ 
Sbjct: 357 KRITIDKALSHPYL 370

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 119/278 (42%), Gaps = 52/278 (18%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQ 149
           Y++  ++G G F  V +C  +   +  A K +         RG+   RE    E+ +L++
Sbjct: 28  YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVS--REEIEREVNILRE 85
Query: 150 LAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL 208
           + +H       + + + F+ +  + ++ E + G  L+DFL +    S   D   +  +Q+
Sbjct: 86  I-RHPN----IITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQI 138
Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
           L+ + ++H   + H DLKPEN++L+      VP+       P+             IK+I
Sbjct: 139 LDGVHYLHSKRIAHFDLKPENIMLLDK---NVPN-------PR-------------IKLI 175
Query: 269 DFGSTTYERPDQNY--IVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEAL 322
           DFG          +  I  T  + APE++    LGL      D+WS+G I   L +G + 
Sbjct: 176 DFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASP 231
Query: 323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
           F      E L  +  V     +         A+ ++RR
Sbjct: 232 FLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRR 269

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 35/220 (15%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEVLQQLAKHDKGGNRCV 161
           ++G+G+FG+V +  D   +++VAIKI+     +   E    EI VL Q        +   
Sbjct: 30  RIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC-----DSSYVT 84
Query: 162 QIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           +    +   + + I+ E LG  S  D LR   +  F I     + +++L+ + ++H    
Sbjct: 85  KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQI---ATMLKEILKGLDYLHSEKK 141
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 280
           IH D+K  NVLL     +K+ D+  +                        G  T  +  +
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVA------------------------GQLTDTQIKR 177
Query: 281 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 320
           N  V T  + APEVI    +    DIWS+G   +EL  GE
Sbjct: 178 NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 101/228 (44%), Gaps = 35/228 (15%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR-EAAMIEIEVLQQLAKHDKGG 157
           ++I  ++G+G FG+V +  ++E   + A K++    +   E  M+EI++L      +   
Sbjct: 39  WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN--- 95
Query: 158 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
              V++ + F Y N++ I+ E       D +     R      ++ + +Q L+ + ++HD
Sbjct: 96  --IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
             +IH DLK  N+L      IK+ D+  S    +                      T +R
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR----------------------TIQR 191
Query: 278 PDQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGE 320
            D    + T ++ APEV++        + Y  D+WS+G  L+E+   E
Sbjct: 192 RDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 237

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 105/225 (46%), Gaps = 34/225 (15%)
Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEV-LQQLAKH 153
             Y+I   +GEG+FG+V   +     + VA+KI+  + + K      IE E+   +L +H
Sbjct: 4   GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 63
Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                  +++ +    ++ I +V E  G+ L+D++ + +  S      R   +Q++  + 
Sbjct: 64  P----HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE--QEARRFFQQIISAVE 117
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           + H   ++H DLKPEN+LL     +K+ D+  S +   D ++ K             GS 
Sbjct: 118 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT----------SCGSP 166
Query: 274 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL-VELC 317
            Y  P+   ++S + Y  PEV          D+WS G IL V LC
Sbjct: 167 NYAAPE---VISGKLYAGPEV----------DVWSCGVILYVMLC 198

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 77/349 (22%), Positives = 129/349 (36%), Gaps = 97/349 (27%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV----------RGIKKYREAAMIEIEVLQ 148
           Y+    +G G    V  C  +   +  A+KI+            +++ REA + E+++L+
Sbjct: 19  YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQ 207
           +++ H       +Q+++ ++      +VF+ +    L+D+L +    +      R+I R 
Sbjct: 79  KVSGHPN----IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRA 132
Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           LLE I  +H L ++H DLKPEN+LL                                IK+
Sbjct: 133 LLEVICALHKLNIVHRDLKPENILL---------------------------DDDMNIKL 165
Query: 268 IDFGSTTYERPDQNY--IVSTRHYRAPEVILGL------GWTYPCDIWSVGCILVELCTG 319
            DFG +    P +    +  T  Y APE+I         G+    D+WS G I+  L  G
Sbjct: 166 TDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
Query: 320 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVM 379
              F   + +  L M+                       + G  +W              
Sbjct: 226 SPPFWHRKQMLMLRMI------------------MSGNYQFGSPEW-------------- 253
Query: 380 KLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                        D  +  +  L+   L   P  R TA EAL HPFF +
Sbjct: 254 -------------DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 155/376 (41%), Gaps = 104/376 (27%)
Query: 64  SLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKE 123
           +L+ +G+A N  P      K+G     +GE   S +K+  K+G G +G+VL C ++    
Sbjct: 13  NLYFQGIAIN--PGMYVRKKEG----KIGE---SYFKVR-KLGSGAYGEVLLCKEKNGHS 62
Query: 124 MVAIKIVR--------------GIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY 169
             AIK+++               I+K+ E    EI +L+ L   +      +++ + F+ 
Sbjct: 63  EKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPN-----IIKLFDVFED 117
Query: 170 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPE 228
           + +  +V E   G  L++ +   N   F       I +Q+L  I ++H   ++H D+KPE
Sbjct: 118 KKYFYLVTEFYEGGELFEQII--NRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPE 175
Query: 229 NVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY--IVST 286
           N+LL +         K+SL                 IK++DFG +++   D      + T
Sbjct: 176 NILLEN---------KNSLLN---------------IKIVDFGLSSFFSKDYKLRDRLGT 211
Query: 287 RHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHM 346
            +Y APEV L   +   CD+WS G I+  L  G   F                G   Q +
Sbjct: 212 AYYIAPEV-LKKKYNEKCDVWSCGVIMYILLCGYPPFG---------------GQNDQDI 255
Query: 347 LKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL 406
           +K+V++   KY      D+ +     +  K ++KL                        +
Sbjct: 256 IKKVEKG--KYY----FDFNDWKNISDEAKELIKL------------------------M 285
Query: 407 LRYDPTDRLTAREALR 422
           L YD   R TA EAL 
Sbjct: 286 LTYDYNKRCTAEEALN 301

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 119/278 (42%), Gaps = 52/278 (18%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQ 149
           Y++  ++G G F  V +C  +   +  A K +         RG+   RE    E+ +L++
Sbjct: 7   YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVS--REEIEREVNILRE 64
Query: 150 LAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL 208
           + +H       + + + F+ +  + ++ E + G  L+DFL +    S   D   +  +Q+
Sbjct: 65  I-RHPN----IITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQI 117
Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
           L+ + ++H   + H DLKPEN++L+      VP+       P+             IK+I
Sbjct: 118 LDGVHYLHSKRIAHFDLKPENIMLLDK---NVPN-------PR-------------IKLI 154
Query: 269 DFGSTTYERPDQNY--IVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEAL 322
           DFG          +  I  T  + APE++    LGL      D+WS+G I   L +G + 
Sbjct: 155 DFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASP 210
Query: 323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
           F      E L  +  V     +         A+ ++RR
Sbjct: 211 FLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRR 248

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/228 (22%), Positives = 103/228 (45%), Gaps = 35/228 (15%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR-EAAMIEIEVLQQLAKHDKGG 157
           ++I  ++G+G FG+V +  ++E   + A K++    +   E  M+EI++L      +   
Sbjct: 39  WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN--- 95
Query: 158 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
              V++ + F Y N++ I+ E       D +     R      ++ + +Q L+ + ++HD
Sbjct: 96  --IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
             +IH DLK  N+L      IK+ D+  S    K++   +R                   
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRXIQR------------------- 191
Query: 278 PDQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGE 320
             ++  + T ++ APEV++        + Y  D+WS+G  L+E+   E
Sbjct: 192 --RDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 237

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/228 (22%), Positives = 103/228 (45%), Gaps = 35/228 (15%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR-EAAMIEIEVLQQLAKHDKGG 157
           ++I  ++G+G FG+V +  ++E   + A K++    +   E  M+EI++L      +   
Sbjct: 39  WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN--- 95
Query: 158 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
              V++ + F Y N++ I+ E       D +     R      ++ + +Q L+ + ++HD
Sbjct: 96  --IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
             +IH DLK  N+L      IK+ D+  S    K++   +R                   
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRXIQR------------------- 191
Query: 278 PDQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGE 320
             ++  + T ++ APEV++        + Y  D+WS+G  L+E+   E
Sbjct: 192 --RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 237

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 86/333 (25%), Positives = 132/333 (39%), Gaps = 73/333 (21%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAK--HDKG 156
           Y++   +G+G F  V  C +RE  +  A+KIV  + K+  +  +  E L++ A   H   
Sbjct: 28  YELCEVIGKGPFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASICHMLK 86
Query: 157 GNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPID--LVREIARQLLECIA 213
               V++   +     + +VFE + G+ L   + K     F     +     RQ+LE + 
Sbjct: 87  HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 146
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           + HD  +IH D+KP  VLL S E               +S+  K      AI++ + G  
Sbjct: 147 YCHDNNIIHRDVKPHCVLLASKE---------------NSAPVKLGGFGVAIQLGESGLV 191
Query: 274 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 333
              R      V T H+ APEV+    +  P D+W  G IL  L +G         L    
Sbjct: 192 AGGR------VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG--------CLPFYG 237
Query: 334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 393
             ER+                            EG      IK   K+   Q     H+ 
Sbjct: 238 TKERLF---------------------------EGI-----IKGKYKMNPRQ---WSHIS 262
Query: 394 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
            SA D   L++ +L  DP +R+T  EAL HP+ 
Sbjct: 263 ESAKD---LVRRMLMLDPAERITVYEALNHPWL 292

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 76/339 (22%), Positives = 125/339 (36%), Gaps = 84/339 (24%)
Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD 154
            T  Y++   +G G++     C  +      A+KI   I K +     EIE+L +  +H 
Sbjct: 20  FTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKI---IDKSKRDPTEEIEILLRYGQHP 76
Query: 155 KGGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
                 + +++ +D   ++ +V E  K G  L   LR+   + F       +   + + +
Sbjct: 77  N----IITLKDVYDDGKYVYVVTELXKGGELLDKILRQ---KFFSEREASAVLFTITKTV 129
Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
            ++H   ++H DLKP N+L                       Y        +I++ DFG 
Sbjct: 130 EYLHAQGVVHRDLKPSNIL-----------------------YVDESGNPESIRICDFGF 166
Query: 273 TTYERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 329
               R +   + +   T ++ APEV+   G+   CDIWS+G +L    TG   F      
Sbjct: 167 AKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFAN---- 222
Query: 330 EHLAMMERVLGP--LPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
                     GP   P+ +L R+          G+     G                   
Sbjct: 223 ----------GPDDTPEEILARIG--------SGKFSLSGG------------------- 245
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
               V  +A D   L+   L  DP  RLTA   LRHP+ 
Sbjct: 246 YWNSVSDTAKD---LVSKXLHVDPHQRLTAALVLRHPWI 281

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 86/333 (25%), Positives = 132/333 (39%), Gaps = 73/333 (21%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAK--HDKG 156
           Y++   +G+G F  V  C +RE  +  A+KIV  + K+  +  +  E L++ A   H   
Sbjct: 26  YELCEVIGKGPFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 157 GNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPID--LVREIARQLLECIA 213
               V++   +     + +VFE + G+ L   + K     F     +     RQ+LE + 
Sbjct: 85  HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           + HD  +IH D+KP  VLL S E               +S+  K      AI++ + G  
Sbjct: 145 YCHDNNIIHRDVKPHCVLLASKE---------------NSAPVKLGGFGVAIQLGESGLV 189
Query: 274 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 333
              R      V T H+ APEV+    +  P D+W  G IL  L +G         L    
Sbjct: 190 AGGR------VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG--------CLPFYG 235
Query: 334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 393
             ER+                            EG      IK   K+   Q     H+ 
Sbjct: 236 TKERLF---------------------------EGI-----IKGKYKMNPRQ---WSHIS 260
Query: 394 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
            SA D   L++ +L  DP +R+T  EAL HP+ 
Sbjct: 261 ESAKD---LVRRMLMLDPAERITVYEALNHPWL 290

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 94/222 (42%), Gaps = 39/222 (17%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEVLQQLAKHDKGGNRCV 161
           ++G+G+FG+V +  D   KE+VAIKI+     +   E    EI VL Q        +   
Sbjct: 26  RIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQC-------DSPY 78
Query: 162 QIRNWFDY--RNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 218
             R +  Y     + I+ E LG  S  D L+           +  I R++L+ + ++H  
Sbjct: 79  ITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEE---TYIATILREILKGLDYLHSE 135
Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
             IH D+K  NVLL     +K+ D+  +                        G  T  + 
Sbjct: 136 RKIHRDIKAANVLLSEQGDVKLADFGVA------------------------GQLTDTQI 171
Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 320
            +N  V T  + APEVI    + +  DIWS+G   +EL  GE
Sbjct: 172 KRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 213

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 95/222 (42%), Gaps = 45/222 (20%)
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
            +L  +  +H+  ++H DL P N+LL  +  I + D+  +     D+             
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADA------------- 188
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQT 325
                       ++ + V+ R YRAPE+++   G+T   D+WS GC++ E+   +ALF+ 
Sbjct: 189 ------------NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRG 236
Query: 326 HENLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL 384
                 L  +  V+G P  + ++      A  Y+R    + P                R 
Sbjct: 237 STFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVP---------------ARA 281
Query: 385 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
              ++   D  A D   L+  +L ++P  R++  +ALRHP+F
Sbjct: 282 WTAVVPTADPVALD---LIAKMLEFNPQRRISTEQALRHPYF 320

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 95/222 (42%), Gaps = 45/222 (20%)
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
            +L  +  +H+  ++H DL P N+LL  +  I + D+  +     D+             
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADA------------- 188
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQT 325
                       ++ + V+ R YRAPE+++   G+T   D+WS GC++ E+   +ALF+ 
Sbjct: 189 ------------NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRG 236
Query: 326 HENLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL 384
                 L  +  V+G P  + ++      A  Y+R    + P                R 
Sbjct: 237 STFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVP---------------ARA 281
Query: 385 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
              ++   D  A D   L+  +L ++P  R++  +ALRHP+F
Sbjct: 282 WTAVVPTADPVALD---LIAKMLEFNPQRRISTEQALRHPYF 320

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 115/275 (41%), Gaps = 46/275 (16%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQ 149
           Y I  ++G G F  V +C ++      A K +         RG+   RE    E+ +L+Q
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGV--CREEIEREVSILRQ 71
Query: 150 LAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL 208
           +   +      + + + ++ R  + ++ E + G  L+DFL +    S   +      +Q+
Sbjct: 72  VLHPN-----IITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQI 124
Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
           L+ + ++H   + H DLKPEN++L+    I +P                       IK+I
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLI 161
Query: 269 DFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 325
           DFG   +E  D      I  T  + APE++         D+WS+G I   L +G + F  
Sbjct: 162 DFG-LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
Query: 326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
               E LA +  V     +    +    A+ ++R+
Sbjct: 221 DTKQETLANITAVSYDFDEEFFSQTSELAKDFIRK 255

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/291 (23%), Positives = 121/291 (41%), Gaps = 33/291 (11%)
Query: 89  FALGENLTSRYKIHSK-MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVL 147
           F   EN  + Y + SK +G G F  V +C  +   +  A K    +KK R       E+L
Sbjct: 20  FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKF---LKKRRRGQDCRAEIL 76
Query: 148 QQLAKHD--KGGNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREI 204
            ++A  +  K   R + +   ++  + I ++ E   G  ++             + V  +
Sbjct: 77  HEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRL 136
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            +Q+LE + ++H   ++H DLKP+N+LL            SS++   D            
Sbjct: 137 IKQILEGVYYLHQNNIVHLDLKPQNILL------------SSIYPLGD------------ 172
Query: 265 IKVIDFGST--TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL 322
           IK++DFG +       +   I+ T  Y APE++     T   D+W++G I   L T  + 
Sbjct: 173 IKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
Query: 323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRE 373
           F   +N E    + +V     +     V + A  +++   +  PE   + E
Sbjct: 233 FVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAE 283

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 107/233 (45%), Gaps = 42/233 (18%)
Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAM-IEIEVLQQLAK 152
           N+   +     +G G F +V     R   ++ A+K ++    +R++++  EI VL+++ K
Sbjct: 6   NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKI-K 64
Query: 153 HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYD-FLRKNNYRSFPIDLVREIARQLLE 210
           H+      V + + ++   H  +V + + G  L+D  L +  Y      LV    +Q+L 
Sbjct: 65  HE----NIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLV---IQQVLS 117
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++H+  ++H DLKPEN+L ++ E                        ++S I + DF
Sbjct: 118 AVKYLHENGIVHRDLKPENLLYLTPE------------------------ENSKIMITDF 153
Query: 271 GSTTYERPDQNYIVSTR----HYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
           G +  E   QN I+ST      Y APEV+    ++   D WS+G I   L  G
Sbjct: 154 GLSKME---QNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 113/261 (43%), Gaps = 35/261 (13%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY----REAAMIEIEVLQQLAKHD 154
           ++ +  +G+G FG+V  C  R   +M A K +   +         A+ E ++L+++    
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV---- 241
Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                 V +   ++ ++ +C+V   + G  L   +       FP       A ++   + 
Sbjct: 242 -NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLE 300
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
            +H   +++ DLKPEN+LL    +I++ D   ++H P+                   G T
Sbjct: 301 DLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE-------------------GQT 341
Query: 274 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 333
              R      V T  Y APEV+    +T+  D W++GC+L E+  G++ FQ  +      
Sbjct: 342 IKGR------VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE 395
Query: 334 MMERVLGPLPQHMLKRVDRHA 354
            +ER++  +P+   +R    A
Sbjct: 396 EVERLVKEVPEEYSERFSPQA 416

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 131/321 (40%), Gaps = 64/321 (19%)
Query: 91  LGENLT-SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ 149
           LG  +T + ++    +G+GTFG+V+   ++      A+KI++     +E  + + EV   
Sbjct: 1   LGSRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILK-----KEVIVAKDEVAHT 55
Query: 150 LAKHDKGGNRCVQ---------IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPID 199
           L +     NR +Q         ++  F   + +C V E   G  L+  L +   R F  D
Sbjct: 56  LTE-----NRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSED 108
Query: 200 LVREIARQLLECIAFMH-DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKR 258
             R    +++  + ++H +  +++ DLK EN++L    +IK+ D+       KD +  K 
Sbjct: 109 RARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX 168
Query: 259 MPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                                      T  Y APEV+    +    D W +G ++ E+  
Sbjct: 169 ------------------------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 204
Query: 319 GEALF--QTHENLEHLAMME-----RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAAS 371
           G   F  Q HE L  L +ME     R LGP  + +L  + +   K     RL        
Sbjct: 205 GRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPK----QRL-----GGG 255
Query: 372 RESIKSVMKLPRLQNLIMQHV 392
            E  K +M+      ++ QHV
Sbjct: 256 SEDAKEIMQHRFFAGIVWQHV 276

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 116/267 (43%), Gaps = 38/267 (14%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY----REAAMIEIEVLQ 148
           +N   +Y++   +G+G FG+V  C  R   +M A K +   +         A+ E ++L+
Sbjct: 183 KNTFRQYRV---LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILE 239
Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 207
           ++          V +   ++ ++ +C+V   + G  L   +       FP       A +
Sbjct: 240 KV-----NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAE 294
Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           +   +  +H   +++ DLKPEN+LL    +I++ D   ++H P+                
Sbjct: 295 ICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE---------------- 338
Query: 268 IDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 327
              G T   R      V T  Y APEV+    +T+  D W++GC+L E+  G++ FQ  +
Sbjct: 339 ---GQTIKGR------VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHA 354
                  +ER++  +P+   +R    A
Sbjct: 390 KKIKREEVERLVKEVPEEYSERFSPQA 416

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 124/306 (40%), Gaps = 63/306 (20%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ-- 162
           +G+GTFG+V+   ++      A+KI++     +E  + + EV   L +     NR +Q  
Sbjct: 18  LGKGTFGKVILVKEKATGRYYAMKILK-----KEVIVAKDEVAHTLTE-----NRVLQNS 67
Query: 163 -------IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                  ++  F   + +C V E   G  L+  L +   R F  D  R    +++  + +
Sbjct: 68  RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDY 125
Query: 215 MH-DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           +H +  +++ DLK EN++L    +IK+ D+       KD +  K                
Sbjct: 126 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX--------------- 170
Query: 274 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEH 331
                       T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  
Sbjct: 171 ---------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE 221
Query: 332 LAMME-----RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 386
           L +ME     R LGP  + +L  + +   K     RL         E  K +M+      
Sbjct: 222 LILMEEIRFPRTLGPEAKSLLSGLLKKDPK----QRL-----GGGSEDAKEIMQHRFFAG 272
Query: 387 LIMQHV 392
           ++ QHV
Sbjct: 273 IVWQHV 278

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 80/336 (23%), Positives = 135/336 (40%), Gaps = 77/336 (22%)
Query: 99  YKIHSK-MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG 157
           YK+ S+ +G G  G+VL+ +++  +E  A+K ++   K R     E+E L   A      
Sbjct: 63  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARR----EVE-LHWRASQCPHI 117
Query: 158 NRCVQI-RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            R V +  N +  R  + IV E L G  L+  ++    ++F      EI + + E I ++
Sbjct: 118 VRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYL 177
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H + + H D+KPEN+L  S    K P+                    + +K+ DFG    
Sbjct: 178 HSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAK- 212
Query: 276 ERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 332
           E    N + +   T +Y APEV+    +   CD WS+G I   L  G   F ++  L   
Sbjct: 213 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLA-- 270
Query: 333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 392
                            +    +  +R G+ ++P    S  S                  
Sbjct: 271 -----------------ISPGXKTRIRXGQYEFPNPEWSEVS------------------ 295
Query: 393 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                ++  L++ LL+ +PT R T  E   HP+  +
Sbjct: 296 ----EEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQ 327

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 113/261 (43%), Gaps = 46/261 (17%)
Query: 97  SRYKIHSKMGEGTFGQVL---ECWDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAK 152
           S++++   +G+G+FG+V    +    + +++ A+K+++    K R+    ++E       
Sbjct: 24  SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKME------- 76
Query: 153 HDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRS-------FPIDLVREIA 205
                +  V++ + F  + H     E     + DFLR  +  +       F  + V+   
Sbjct: 77  ----RDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 132
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 265
            +L   +  +H L +I+ DLKPEN+LL    +IK+ D+  S    K+S            
Sbjct: 133 AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS----KES------------ 176
Query: 266 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 325
             ID     Y          T  Y APEV+   G T   D WS G ++ E+ TG   FQ 
Sbjct: 177 --IDHEKKAYS------FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 228
Query: 326 HENLEHLAMMERVLGPLPQHM 346
            +  E + M+ +    +PQ +
Sbjct: 229 KDRKETMTMILKAKLGMPQFL 249

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 124/306 (40%), Gaps = 63/306 (20%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ-- 162
           +G+GTFG+V+   ++      A+KI++     +E  + + EV   L +     NR +Q  
Sbjct: 17  LGKGTFGKVILVKEKATGRYYAMKILK-----KEVIVAKDEVAHTLTE-----NRVLQNS 66
Query: 163 -------IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                  ++  F   + +C V E   G  L+  L +   R F  D  R    +++  + +
Sbjct: 67  RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDY 124
Query: 215 MH-DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           +H +  +++ DLK EN++L    +IK+ D+       KD +  K                
Sbjct: 125 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX--------------- 169
Query: 274 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEH 331
                       T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  
Sbjct: 170 ---------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE 220
Query: 332 LAMME-----RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 386
           L +ME     R LGP  + +L  + +   K     RL         E  K +M+      
Sbjct: 221 LILMEEIRFPRTLGPEAKSLLSGLLKKDPK----QRL-----GGGSEDAKEIMQHRFFAG 271
Query: 387 LIMQHV 392
           ++ QHV
Sbjct: 272 IVWQHV 277

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 126/306 (41%), Gaps = 63/306 (20%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ-- 162
           +G+GTFG+V+   ++      A+KI++     +E  + + EV   L +     NR +Q  
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILK-----KEVIVAKDEVAHTLTE-----NRVLQNS 205
Query: 163 -------IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                  ++  F   + +C V E   G  L+  L +   R F  D  R    +++  + +
Sbjct: 206 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDY 263
Query: 215 MH-DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           +H +  +++ DLK EN++L    +IK+ D+       KD +  K                
Sbjct: 264 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--------------- 308
Query: 274 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEH 331
                       T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  
Sbjct: 309 ---------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE 359
Query: 332 LAMME-----RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 386
           L +ME     R LGP  + +L  + +   K     RL    G  S E  K +M+      
Sbjct: 360 LILMEEIRFPRTLGPEAKSLLSGLLKKDPKQ----RL----GGGS-EDAKEIMQHRFFAG 410
Query: 387 LIMQHV 392
           ++ QHV
Sbjct: 411 IVWQHV 416

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 110/241 (45%), Gaps = 34/241 (14%)
Query: 100 KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           K+  K+G G FG+V +  +++  K  VA+K ++      EA + E  V++ L +HDK   
Sbjct: 191 KLEKKLGAGQFGEVWMATYNKHTK--VAVKTMKPGSMSVEAFLAEANVMKTL-QHDK--- 244
Query: 159 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             V++      +  I I+ E +   SL DFL+ +     P+  + + + Q+ E +AF+  
Sbjct: 245 -LVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 302
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
              IH DL+  N+L+ +S   K+ D+  +    +D+ Y  R      IK           
Sbjct: 303 RNYIHRDLRAANILVSASLVCKIADFGLA-RVIEDNEYTAREGAKFPIK----------- 350
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 336
                      + APE I    +T   D+WS G +L+E+ T G   +    N E +  +E
Sbjct: 351 -----------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE 399
Query: 337 R 337
           R
Sbjct: 400 R 400

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 113/261 (43%), Gaps = 46/261 (17%)
Query: 97  SRYKIHSKMGEGTFGQVL---ECWDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAK 152
           S++++   +G+G+FG+V    +    + +++ A+K+++    K R+    ++E       
Sbjct: 25  SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKME------- 77
Query: 153 HDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRS-------FPIDLVREIA 205
                +  V++ + F  + H     E     + DFLR  +  +       F  + V+   
Sbjct: 78  ----RDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 133
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 265
            +L   +  +H L +I+ DLKPEN+LL    +IK+ D+  S    K+S            
Sbjct: 134 AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS----KES------------ 177
Query: 266 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 325
             ID     Y          T  Y APEV+   G T   D WS G ++ E+ TG   FQ 
Sbjct: 178 --IDHEKKAYS------FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 229
Query: 326 HENLEHLAMMERVLGPLPQHM 346
            +  E + M+ +    +PQ +
Sbjct: 230 KDRKETMTMILKAKLGMPQFL 250

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 126/306 (41%), Gaps = 63/306 (20%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ-- 162
           +G+GTFG+V+   ++      A+KI++     +E  + + EV   L +     NR +Q  
Sbjct: 159 LGKGTFGKVILVKEKATGRYYAMKILK-----KEVIVAKDEVAHTLTE-----NRVLQNS 208
Query: 163 -------IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                  ++  F   + +C V E   G  L+  L +   R F  D  R    +++  + +
Sbjct: 209 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDY 266
Query: 215 MH-DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           +H +  +++ DLK EN++L    +IK+ D+       KD +  K                
Sbjct: 267 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--------------- 311
Query: 274 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEH 331
                       T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  
Sbjct: 312 ---------FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE 362
Query: 332 LAMME-----RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 386
           L +ME     R LGP  + +L  + +   K     RL    G  S E  K +M+      
Sbjct: 363 LILMEEIRFPRTLGPEAKSLLSGLLKKDPKQ----RL----GGGS-EDAKEIMQHRFFAG 413
Query: 387 LIMQHV 392
           ++ QHV
Sbjct: 414 IVWQHV 419

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 115/274 (41%), Gaps = 57/274 (20%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA---------AMIEIEV 146
           + +Y   S +G G FG V    D+E+ + V +K ++  K   +            +EI +
Sbjct: 23  SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 147 LQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIAR 206
           L ++   +      +++ + F+ +    +V EK GS L  F   + +      L   I R
Sbjct: 83  LSRVEHAN-----IIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFR 137
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           QL+  + ++    +IH D+K EN+++                            +   IK
Sbjct: 138 QLVSAVGYLRLKDIIHRDIKDENIVIA---------------------------EDFTIK 170
Query: 267 VIDFGSTTY-ERPDQNY-IVSTRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALF 323
           +IDFGS  Y ER    Y    T  Y APEV++G  +  P  ++WS+G  L  L   E  F
Sbjct: 171 LIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
Query: 324 -QTHENLEH------------LAMMERVLGPLPQ 344
            +  E +E             ++++  +L P+P+
Sbjct: 231 CELEETVEAAIHPPYLVSKELMSLVSGLLQPVPE 264

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 77/360 (21%), Positives = 138/360 (38%), Gaps = 91/360 (25%)
Query: 75  SPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RG 132
           S  W++  +D   +F   E L          G G F +V+   ++   ++ A+K +  + 
Sbjct: 10  SSSWKKQAEDIKKIFEFKETL----------GTGAFSEVVLAEEKATGKLFAVKCIPKKA 59
Query: 133 IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKN 191
           +K    +   EI VL+++ KH+      V + + ++  NH+ +V + + G  L+D + + 
Sbjct: 60  LKGKESSIENEIAVLRKI-KHE----NIVALEDIYESPNHLYLVMQLVSGGELFDRIVEK 114
Query: 192 NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK 251
            +  +       + RQ+L+ + ++H + ++H DLKPEN+L  S +               
Sbjct: 115 GF--YTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQD--------------- 157
Query: 252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSV 309
                    + S I + DFG +  E      +    T  Y APEV+    ++   D WS+
Sbjct: 158 ---------EESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSI 208
Query: 310 GCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGA 369
           G I   L  G   F    +             L + +LK        Y       W +  
Sbjct: 209 GVIAYILLCGYPPFYDEND-----------SKLFEQILKAEYEFDSPY-------WDD-- 248
Query: 370 ASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                                 +  SA D    ++ L+  DP  R T  +A RHP+   D
Sbjct: 249 ----------------------ISDSAKD---FIRNLMEKDPNKRYTCEQAARHPWIAGD 283

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 108/247 (43%), Gaps = 51/247 (20%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           +G+GT+G V    D   +  +AIK I     +Y +    EI     L KH K  N  VQ 
Sbjct: 30  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEI----ALHKHLKHKN-IVQY 84
Query: 164 RNWFDYRNHICIVFEKL-GSSLYDFLR------KNNYRSFPIDLVREIARQLLECIAFMH 216
              F     I I  E++ G SL   LR      K+N ++          +Q+LE + ++H
Sbjct: 85  LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF-----YTKQILEGLKYLH 139
Query: 217 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST--- 273
           D  ++H D+K +NVL+                    ++Y      S  +K+ DFG++   
Sbjct: 140 DNQIVHRDIKGDNVLI--------------------NTY------SGVLKISDFGTSKRL 173
Query: 274 TYERPDQNYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 331
               P       T  Y APE+I     G+    DIWS+GC ++E+ TG+  F  +E  E 
Sbjct: 174 AGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF--YELGEP 231
Query: 332 LAMMERV 338
            A M +V
Sbjct: 232 QAAMFKV 238

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 113/261 (43%), Gaps = 46/261 (17%)
Query: 97  SRYKIHSKMGEGTFGQVL---ECWDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAK 152
           S++++   +G+G+FG+V    +    + +++ A+K+++    K R+    ++E       
Sbjct: 24  SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKME------- 76
Query: 153 HDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRS-------FPIDLVREIA 205
                +  V++ + F  + H     E     + DFLR  +  +       F  + V+   
Sbjct: 77  ----RDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 132
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 265
            +L   +  +H L +I+ DLKPEN+LL    +IK+ D+  S    K+S            
Sbjct: 133 AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS----KES------------ 176
Query: 266 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 325
             ID     Y          T  Y APEV+   G T   D WS G ++ E+ TG   FQ 
Sbjct: 177 --IDHEKKAYS------FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 228
Query: 326 HENLEHLAMMERVLGPLPQHM 346
            +  E + M+ +    +PQ +
Sbjct: 229 KDRKETMTMILKAKLGMPQFL 249

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 135/343 (39%), Gaps = 83/343 (24%)
Query: 93  ENL--TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEV-LQ 148
           ENL   S Y++  ++G+G F  V  C      +  A KI+   K   R+   +E E  + 
Sbjct: 16  ENLYFQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARIC 75
Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 207
           +L KH       V++ +      H  ++F+ + G  L++ +    Y S   D    I +Q
Sbjct: 76  RLLKHPN----IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS-EADASHCI-QQ 129
Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           +LE +   H + ++H DLKPEN+LL S                          K +A+K+
Sbjct: 130 ILEAVLHCHQMGVVHRDLKPENLLLASK------------------------LKGAAVKL 165
Query: 268 IDFGSTTYERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
            DFG       +Q        T  Y +PEV+    +  P D+W+ G IL  L  G   F 
Sbjct: 166 ADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFW 225
Query: 325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL 384
             +                QH L        + ++ G  D+P               P  
Sbjct: 226 DED----------------QHRLY-------QQIKAGAYDFPS--------------PEW 248
Query: 385 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
             +  +  D        L+  +L  +P+ R+TA EAL+HP+ +
Sbjct: 249 DTVTPEAKD--------LINKMLTINPSKRITAAEALKHPWIS 283

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 34/241 (14%)
Query: 100 KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           K+  K+G G FG+V +  +++  K  VA+K ++      EA + E  V++ L +HDK   
Sbjct: 18  KLEKKLGAGQFGEVWMATYNKHTK--VAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVK 74
Query: 159 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
               +      +  I I+ E +   SL DFL+ +     P+  + + + Q+ E +AF+  
Sbjct: 75  LHAVVT-----KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 129
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
              IH DL+  N+L+ +S   K+ D+  +    +D+ Y  R      IK           
Sbjct: 130 RNYIHRDLRAANILVSASLVCKIADFGLA-RVIEDNEYTAREGAKFPIK----------- 177
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 336
                      + APE I    +T   D+WS G +L+E+ T G   +    N E +  +E
Sbjct: 178 -----------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE 226
Query: 337 R 337
           R
Sbjct: 227 R 227

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 74/347 (21%), Positives = 132/347 (38%), Gaps = 91/347 (26%)
Query: 91  LGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-----EIE 145
           +GE +   +K+ + +G+G+F  V           VAIK++     Y+ A M+     E++
Sbjct: 6   IGEKIED-FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYK-AGMVQRVQNEVK 63
Query: 146 VLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIA 205
           +  QL KH       +++ N+F+  N++ +V E   +   +   KN  + F  +  R   
Sbjct: 64  IHCQL-KHPS----ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFM 118
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY--KSSLHTPKDSSYFKRMPKSS 263
            Q++  + ++H   ++H DL   N+LL  +  IK+ D+   + L  P +  Y        
Sbjct: 119 HQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY-------- 170
Query: 264 AIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 323
                              +  T +Y +PE+          D+WS+GC+   L  G   F
Sbjct: 171 ------------------TLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPF 212
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
            T                                               +++K+ +    
Sbjct: 213 DT-----------------------------------------------DTVKNTLNKVV 225
Query: 384 LQNLIM-QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
           L +  M   +   A DL H    LLR +P DRL+    L HPF +R+
Sbjct: 226 LADYEMPSFLSIEAKDLIH---QLLRRNPADRLSLSSVLDHPFMSRN 269

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 39/222 (17%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEVLQQLAKHDKGGNRCV 161
           K+G+G+FG+V +  D   +++VAIKI+     +   E    EI VL Q            
Sbjct: 29  KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-----DSPYVT 83
Query: 162 QIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPID--LVREIARQLLECIAFMHDL 218
           +    +     + I+ E LG  S  D L        P+D   +  I R++L+ + ++H  
Sbjct: 84  KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE 138
Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
             IH D+K  NVLL     +K+ D+  +                        G  T  + 
Sbjct: 139 KKIHRDIKAANVLLSEHGEVKLADFGVA------------------------GQLTDTQI 174
Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 320
            +N  V T  + APEVI    +    DIWS+G   +EL  GE
Sbjct: 175 KRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 108/247 (43%), Gaps = 51/247 (20%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           +G+GT+G V    D   +  +AIK I     +Y +    EI     L KH K  N  VQ 
Sbjct: 16  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEI----ALHKHLKHKN-IVQY 70
Query: 164 RNWFDYRNHICIVFEKL-GSSLYDFLR------KNNYRSFPIDLVREIARQLLECIAFMH 216
              F     I I  E++ G SL   LR      K+N ++          +Q+LE + ++H
Sbjct: 71  LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF-----YTKQILEGLKYLH 125
Query: 217 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST--- 273
           D  ++H D+K +NVL+                    ++Y      S  +K+ DFG++   
Sbjct: 126 DNQIVHRDIKGDNVLI--------------------NTY------SGVLKISDFGTSKRL 159
Query: 274 TYERPDQNYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 331
               P       T  Y APE+I     G+    DIWS+GC ++E+ TG+  F  +E  E 
Sbjct: 160 AGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF--YELGEP 217
Query: 332 LAMMERV 338
            A M +V
Sbjct: 218 QAAMFKV 224

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 132/332 (39%), Gaps = 85/332 (25%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRG---IKKY-REAAMIEIEVLQQLAKHDKGGNRC 160
           +G+G F +  E  D + KE+ A KIV     +K + RE   +EI + + LA         
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-----HV 103
Query: 161 VQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V    +F+  + + +V E     SL +  ++    + P    R   RQ++    ++H   
Sbjct: 104 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNR 161
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +IH DLK  N+ L     +K+ D+                    A KV       Y+   
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDF------------------GLATKV------EYDGER 197
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 339
           +  +  T +Y APEV+   G ++  D+WS+GCI+  L  G+  F+T              
Sbjct: 198 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET-------------- 243
Query: 340 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 399
                  LK      E Y+R  + ++                      I +H++  A   
Sbjct: 244 -----SCLK------ETYLRIKKNEYS---------------------IPKHINPVAAS- 270
Query: 400 THLLQGLLRYDPTDRLTAREALRHPFFTRDHL 431
             L+Q +L+ DPT R T  E L   FFT  ++
Sbjct: 271 --LIQKMLQTDPTARPTINELLNDEFFTSGYI 300

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 132/332 (39%), Gaps = 85/332 (25%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRG---IKKY-REAAMIEIEVLQQLAKHDKGGNRC 160
           +G+G F +  E  D + KE+ A KIV     +K + RE   +EI + + LA         
Sbjct: 47  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-----HV 101
Query: 161 VQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V    +F+  + + +V E     SL +  ++    + P    R   RQ++    ++H   
Sbjct: 102 VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNR 159
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +IH DLK  N+ L     +K+ D+                    A KV       Y+   
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDF------------------GLATKV------EYDGER 195
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 339
           +  +  T +Y APEV+   G ++  D+WS+GCI+  L  G+  F+T              
Sbjct: 196 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET-------------- 241
Query: 340 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 399
                  LK      E Y+R  + ++                      I +H++  A   
Sbjct: 242 -----SCLK------ETYLRIKKNEYS---------------------IPKHINPVAAS- 268
Query: 400 THLLQGLLRYDPTDRLTAREALRHPFFTRDHL 431
             L+Q +L+ DPT R T  E L   FFT  ++
Sbjct: 269 --LIQKMLQTDPTARPTINELLNDEFFTSGYI 298

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 132/332 (39%), Gaps = 85/332 (25%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRG---IKKY-REAAMIEIEVLQQLAKHDKGGNRC 160
           +G+G F +  E  D + KE+ A KIV     +K + RE   +EI + + LA         
Sbjct: 29  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-----HV 83
Query: 161 VQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V    +F+  + + +V E     SL +  ++    + P    R   RQ++    ++H   
Sbjct: 84  VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNR 141
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +IH DLK  N+ L     +K+ D+                    A KV       Y+   
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDF------------------GLATKV------EYDGER 177
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 339
           +  +  T +Y APEV+   G ++  D+WS+GCI+  L  G+  F+T              
Sbjct: 178 KKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET-------------- 223
Query: 340 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 399
                  LK      E Y+R  + ++                      I +H++  A   
Sbjct: 224 -----SCLK------ETYLRIKKNEYS---------------------IPKHINPVAAS- 250
Query: 400 THLLQGLLRYDPTDRLTAREALRHPFFTRDHL 431
             L+Q +L+ DPT R T  E L   FFT  ++
Sbjct: 251 --LIQKMLQTDPTARPTINELLNDEFFTSGYI 280

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 44/275 (16%)
Query: 94  NLTSRYKIHSKMGEGTFGQV-LECWDRERKEMVAIKI----VRGIKKYREAAMIEIEVLQ 148
           ++   Y + + +G G++G+V +      R    A KI    V  + ++++    EIE+++
Sbjct: 23  DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQ----EIEIMK 78
Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEK-LGSSLYDFLRKNNYRSFPIDLVREIARQ 207
            L   +      +++   F+    I +V E   G  L++  R  + R F       I + 
Sbjct: 79  SLDHPN-----IIRLYETFEDNTDIYLVMELCTGGELFE--RVVHKRVFRESDAARIMKD 131
Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           +L  +A+ H L + H DLKPEN L ++      PD                    S +K+
Sbjct: 132 VLSAVAYCHKLNVAHRDLKPENFLFLTDS----PD--------------------SPLKL 167
Query: 268 IDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 325
           IDFG     +P +     V T +Y +P+V+ GL +   CD WS G ++  L  G   F  
Sbjct: 168 IDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSA 226
Query: 326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
             + E +  +       P+     V   AE  +RR
Sbjct: 227 PTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRR 261

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 81/341 (23%), Positives = 132/341 (38%), Gaps = 81/341 (23%)
Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEV-LQQLA 151
           ++T  Y++  ++G+G F  V  C      +  A KI+   K   R+   +E E  + +L 
Sbjct: 1   SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
           KH       V++ +         +VF+ + G  L++ +    Y S   D    I +Q+LE
Sbjct: 61  KHP----NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS-EADASHCI-QQILE 114
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            +   H   ++H DLKPEN+LL S                          K +A+K+ DF
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLLASKS------------------------KGAAVKLADF 150
Query: 271 GSTTYERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 327
           G     + DQ        T  Y +PEV+    +  P D+W+ G IL  L  G   F   +
Sbjct: 151 GLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDED 210
Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
                           QH L        + ++ G  D+P               P    +
Sbjct: 211 ----------------QHRLY-------QQIKAGAYDFPS--------------PEWDTV 233
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
             +  D        L+  +L  +P  R+TA EAL+HP+  +
Sbjct: 234 TPEAKD--------LINKMLTINPAKRITASEALKHPWICQ 266

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 132/332 (39%), Gaps = 85/332 (25%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRG---IKKY-REAAMIEIEVLQQLAKHDKGGNRC 160
           +G+G F +  E  D + KE+ A KIV     +K + RE   +EI + + LA         
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-----HV 79
Query: 161 VQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V    +F+  + + +V E     SL +  ++    + P    R   RQ++    ++H   
Sbjct: 80  VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNR 137
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +IH DLK  N+ L     +K+ D+                    A KV       Y+   
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDF------------------GLATKV------EYDGER 173
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 339
           +  +  T +Y APEV+   G ++  D+WS+GCI+  L  G+  F+T              
Sbjct: 174 KKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET-------------- 219
Query: 340 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 399
                  LK      E Y+R  + ++                      I +H++  A   
Sbjct: 220 -----SCLK------ETYLRIKKNEYS---------------------IPKHINPVAAS- 246
Query: 400 THLLQGLLRYDPTDRLTAREALRHPFFTRDHL 431
             L+Q +L+ DPT R T  E L   FFT  ++
Sbjct: 247 --LIQKMLQTDPTARPTINELLNDEFFTSGYI 276

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 39/222 (17%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEVLQQLAKHDKGGNRCV 161
           K+G+G+FG+V +  D   +++VAIKI+     +   E    EI VL Q            
Sbjct: 14  KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-----DSPYVT 68
Query: 162 QIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPID--LVREIARQLLECIAFMHDL 218
           +    +     + I+ E LG  S  D L        P+D   +  I R++L+ + ++H  
Sbjct: 69  KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE 123
Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
             IH D+K  NVLL     +K+ D+  +                        G  T  + 
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVA------------------------GQLTDTQI 159
Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 320
            +N  V T  + APEVI    +    DIWS+G   +EL  GE
Sbjct: 160 KRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 39/222 (17%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEVLQQLAKHDKGGNRCV 161
           K+G+G+FG+V +  D   +++VAIKI+     +   E    EI VL Q            
Sbjct: 14  KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-----DSPYVT 68
Query: 162 QIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPID--LVREIARQLLECIAFMHDL 218
           +    +     + I+ E LG  S  D L        P+D   +  I R++L+ + ++H  
Sbjct: 69  KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE 123
Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
             IH D+K  NVLL     +K+ D+  +                        G  T  + 
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVA------------------------GQLTDTQI 159
Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 320
            +N  V T  + APEVI    +    DIWS+G   +EL  GE
Sbjct: 160 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 44/275 (16%)
Query: 94  NLTSRYKIHSKMGEGTFGQV-LECWDRERKEMVAIKI----VRGIKKYREAAMIEIEVLQ 148
           ++   Y + + +G G++G+V +      R    A KI    V  + ++++    EIE+++
Sbjct: 6   DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQ----EIEIMK 61
Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEK-LGSSLYDFLRKNNYRSFPIDLVREIARQ 207
            L   +      +++   F+    I +V E   G  L++  R  + R F       I + 
Sbjct: 62  SLDHPN-----IIRLYETFEDNTDIYLVMELCTGGELFE--RVVHKRVFRESDAARIMKD 114
Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           +L  +A+ H L + H DLKPEN L ++      PD                    S +K+
Sbjct: 115 VLSAVAYCHKLNVAHRDLKPENFLFLTDS----PD--------------------SPLKL 150
Query: 268 IDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 325
           IDFG     +P +     V T +Y +P+V+ GL +   CD WS G ++  L  G   F  
Sbjct: 151 IDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSA 209
Query: 326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
             + E +  +       P+     V   AE  +RR
Sbjct: 210 PTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRR 244

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 132/332 (39%), Gaps = 85/332 (25%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRG---IKKY-REAAMIEIEVLQQLAKHDKGGNRC 160
           +G+G F +  E  D + KE+ A KIV     +K + RE   +EI + + LA         
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-----HV 79
Query: 161 VQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V    +F+  + + +V E     SL +  ++    + P    R   RQ++    ++H   
Sbjct: 80  VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNR 137
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +IH DLK  N+ L     +K+ D+                    A KV       Y+   
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDF------------------GLATKV------EYDGER 173
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 339
           +  +  T +Y APEV+   G ++  D+WS+GCI+  L  G+  F+T              
Sbjct: 174 KKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET-------------- 219
Query: 340 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 399
                  LK      E Y+R  + ++                      I +H++  A   
Sbjct: 220 -----SCLK------ETYLRIKKNEYS---------------------IPKHINPVAAS- 246
Query: 400 THLLQGLLRYDPTDRLTAREALRHPFFTRDHL 431
             L+Q +L+ DPT R T  E L   FFT  ++
Sbjct: 247 --LIQKMLQTDPTARPTINELLNDEFFTSGYI 276

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 39/222 (17%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEVLQQLAKHDKGGNRCV 161
           K+G+G+FG+V +  D   +++VAIKI+     +   E    EI VL Q            
Sbjct: 34  KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-----DSPYVT 88
Query: 162 QIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPID--LVREIARQLLECIAFMHDL 218
           +    +     + I+ E LG  S  D L        P+D   +  I R++L+ + ++H  
Sbjct: 89  KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE 143
Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
             IH D+K  NVLL     +K+ D+  +                        G  T  + 
Sbjct: 144 KKIHRDIKAANVLLSEHGEVKLADFGVA------------------------GQLTDTQI 179
Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 320
            +N  V T  + APEVI    +    DIWS+G   +EL  GE
Sbjct: 180 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 221

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+    +E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 70  LGTGSFGRVMLVKHKESGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 119
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E + G  ++  LR+    S P    R  A Q++    +
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 177
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+L+    YI+V D+           + KR+  ++           
Sbjct: 178 LHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVKGATWT--------- 218
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 219 --------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 132/332 (39%), Gaps = 85/332 (25%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRG---IKKY-REAAMIEIEVLQQLAKHDKGGNRC 160
           +G+G F +  E  D + KE+ A KIV     +K + RE   +EI + + LA         
Sbjct: 23  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ-----HV 77
Query: 161 VQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V    +F+  + + +V E     SL +  ++    + P    R   RQ++    ++H   
Sbjct: 78  VGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNR 135
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +IH DLK  N+ L     +K+ D+                    A KV       Y+   
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDF------------------GLATKV------EYDGER 171
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 339
           +  +  T +Y APEV+   G ++  D+WS+GCI+  L  G+  F+T              
Sbjct: 172 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET-------------- 217
Query: 340 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 399
                  LK      E Y+R  + ++                      I +H++  A   
Sbjct: 218 -----SCLK------ETYLRIKKNEYS---------------------IPKHINPVAAS- 244
Query: 400 THLLQGLLRYDPTDRLTAREALRHPFFTRDHL 431
             L+Q +L+ DPT R T  E L   FFT  ++
Sbjct: 245 --LIQKMLQTDPTARPTINELLNDEFFTSGYI 274

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 35/218 (16%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+    +E     A+KI   + K +   + +IE      +  +  N    ++
Sbjct: 50  LGTGSFGRVMLVKHKETGNHYAMKI---LDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVK 106
Query: 165 NWFDYRNH--ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 221
             F ++++  + +V E   G  ++  LR+    S P    R  A Q++    ++H L +I
Sbjct: 107 LEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDLI 164
Query: 222 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 281
           + DLKPEN+L+    YIKV D+           + KR+           G T        
Sbjct: 165 YRDLKPENLLIDQQGYIKVADF----------GFAKRVK----------GRTWX------ 198
Query: 282 YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
            +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 199 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 83/337 (24%), Positives = 132/337 (39%), Gaps = 81/337 (24%)
Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEV-LQQLAK 152
            T  Y++  ++G+G F  V  C  +   +  A KI+   K   R+   +E E  + +L K
Sbjct: 29  FTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLK 88
Query: 153 HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
           H       V++ +         +VF+ + G  L++ +    Y S   D    I  Q+LE 
Sbjct: 89  HPN----IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS-EADASHCI-HQILES 142
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           +  +H   ++H DLKPEN+LL S                          K +A+K+ DFG
Sbjct: 143 VNHIHQHDIVHRDLKPENLLLASK------------------------CKGAAVKLADFG 178
Query: 272 STTYERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 328
                + +Q        T  Y +PEV+    +  P DIW+ G IL  L  G   F   + 
Sbjct: 179 LAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDED- 237
Query: 329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 388
                          QH L        + ++ G  D+P       S +     P  +NLI
Sbjct: 238 ---------------QHKLY-------QQIKAGAYDFP-------SPEWDTVTPEAKNLI 268
Query: 389 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 425
            Q               +L  +P  R+TA +AL+HP+
Sbjct: 269 NQ---------------MLTINPAKRITADQALKHPW 290

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/341 (23%), Positives = 132/341 (38%), Gaps = 81/341 (23%)
Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEV-LQQLA 151
           ++T  Y++  ++G+G F  V  C      +  A KI+   K   R+   +E E  + +L 
Sbjct: 1   SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
           KH       V++ +         +VF+ + G  L++ +    Y S   D    I +Q+LE
Sbjct: 61  KHPN----IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS-EADASHCI-QQILE 114
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            +   H   ++H DLKPEN+LL S                          K +A+K+ DF
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLLASKS------------------------KGAAVKLADF 150
Query: 271 GSTTYERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 327
           G     + DQ        T  Y +PEV+    +  P D+W+ G IL  L  G   F   +
Sbjct: 151 GLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDED 210
Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
                           QH L        + ++ G  D+P               P    +
Sbjct: 211 ----------------QHRLY-------QQIKAGAYDFPS--------------PEWDTV 233
Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
             +  D        L+  +L  +P  R+TA EAL+HP+  +
Sbjct: 234 TPEAKD--------LINKMLTINPAKRITASEALKHPWICQ 266

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+    +E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 98
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E + G  ++  LR+    S P    R  A Q++    +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTW 196
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 197 X-------LAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 100 KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 270 RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 323
Query: 159 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 324 -LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 381
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
           +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 382 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 429
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 336
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 430 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 478
Query: 337 R 337
           R
Sbjct: 479 R 479

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+    +E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 98
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E + G  ++  LR+    S P    R  A Q++    +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTW 196
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 197 X-------LXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 39/220 (17%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 160
           +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 49  LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 103
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 104 VKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 161
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +I+ DLKPEN+L+    YI+V D+           + KR+           G T      
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTWX---- 197
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
              +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 198 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 39/220 (17%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 160
           +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 49  LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 103
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 104 VKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 161
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +I+ DLKPEN+L+    YI+V D+           + KR+           G T      
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTWX---- 197
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
              +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 198 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 39/220 (17%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 160
           +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 49  LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 103
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 104 VKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 161
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +I+ DLKPEN+L+    YI+V D+           + KR+           G T      
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTWX---- 197
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
              +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 198 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 33/228 (14%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEV-LQQLAKHDK 155
           Y I   +GEG+FG+V      + ++ VA+K +  + +KK      +E E+   +L +H  
Sbjct: 11  YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHP- 69
Query: 156 GGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
                +++ +       I +V E  G  L+D++ +   +    D  R   +Q++  I + 
Sbjct: 70  ---HIIKLYDVITTPTDIVMVIEYAGGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYC 124
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H   ++H DLKPEN+LL  +  +K+ D+  S +   D ++ K             GS  Y
Sbjct: 125 HRHKIVHRDLKPENLLLDDNLNVKIADFGLS-NIMTDGNFLK----------TSCGSPNY 173
Query: 276 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 323
             P+   +++ + Y  PEV          D+WS G +L  +  G   F
Sbjct: 174 AAPE---VINGKLYAGPEV----------DVWSCGIVLYVMLVGRLPF 208

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+    +E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 70  LGTGSFGRVMLVKHKETGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 119
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E + G  ++  LR+    S P    R  A Q++    +
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 177
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T 
Sbjct: 178 LHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTW 217
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 218 X-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/335 (21%), Positives = 132/335 (39%), Gaps = 85/335 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           ++I   +G+G FG V    +++RK ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 7   FEIGRPLGKGKFGNVYLAREKQRKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 64
Query: 157 GNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            N  +++  +F     + ++ E   LG+ +Y  L+K +   F          +L   +++
Sbjct: 65  PN-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQKLS--KFDEQRTATYITELANALSY 120
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN+LL S+  +K+ D+  S+H P                        
Sbjct: 121 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--------------------- 159
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 160 -----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 214
Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           + RV    P             +V  G  D                              
Sbjct: 215 ISRVEFTFPD------------FVTEGARD------------------------------ 232
Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  L+  LL+++P+ R   RE L HP+ T +
Sbjct: 233 -------LISRLLKHNPSQRPMLREVLEHPWITAN 260

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 97/220 (44%), Gaps = 39/220 (17%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 160
           +G G+FG+V+     E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 49  IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 103
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 104 VKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 161
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +I+ DLKPEN+L+    YIKV D+           + KR+           G T      
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADF----------GFAKRVK----------GRTWX---- 197
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
              +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 198 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 102/236 (43%), Gaps = 49/236 (20%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+    +E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 98
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E + G  ++  LR+    S P    R  A Q++    +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTW 196
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                   +  T  Y APE+IL  G+    D W++G ++ E+  G   F   E ++
Sbjct: 197 X-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQ 245

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+    +E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 50  LGTGSFGRVMLVKHKESGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 99
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E + G  ++  LR+    S P    R  A Q++    +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 157
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T 
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTW 197
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 198 X-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 97/220 (44%), Gaps = 39/220 (17%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 160
           +G G+FG+V+     E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 49  IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 103
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 104 VKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 161
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +I+ DLKPEN+L+    YIKV D+           + KR+           G T      
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADF----------GFAKRVK----------GRTWX---- 197
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
              +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 198 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 112/271 (41%), Gaps = 38/271 (14%)
Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD 154
           L  +Y I   +G G FG V  C +   K+    K V+     +     EI +L  +A+H 
Sbjct: 3   LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILN-IARH- 60
Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIA---RQLLEC 211
                 + +   F+    + ++FE +  S  D   + N  +F ++  REI     Q+ E 
Sbjct: 61  ---RNILHLHESFESMEELVMIFEFI--SGLDIFERINTSAFELN-EREIVSYVHQVCEA 114
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           + F+H   + H D++PEN++           Y++               +SS IK+I+FG
Sbjct: 115 LQFLHSHNIGHFDIRPENII-----------YQTR--------------RSSTIKIIEFG 149
Query: 272 STTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 329
                +P  N+  + +   Y APEV      +   D+WS+G ++  L +G   F    N 
Sbjct: 150 QARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ 209
Query: 330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
           + +  +        +   K +   A  +V R
Sbjct: 210 QIIENIMNAEYTFDEEAFKEISIEAMDFVDR 240

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+    +E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 98
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E + G  ++  LR+    S P    R  A Q++    +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTW 196
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 197 X-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 108/249 (43%), Gaps = 36/249 (14%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           + I   +G+G FG V    +R+ K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 14  FDIGRPLGKGKFGNVYLARERQSKFILALKVL--FKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 157 GNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            N  +++  +F     + ++ E   LG+ +Y  L+K +   F          +L   +++
Sbjct: 72  PN-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQKLS--RFDEQRTATYITELANALSY 127
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN+LL S+  +K+ D+  S+H P                        
Sbjct: 128 CHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR--------------------- 166
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                ++ +  T  Y  PE+I G       D+WS+G +  E   G   F+ H   E    
Sbjct: 167 -----RDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRR 221
Query: 335 MERVLGPLP 343
           + RV    P
Sbjct: 222 ISRVEFTFP 230

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+    +E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 98
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E + G  ++  LR+    S P    R  A Q++    +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTW 196
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 197 X-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+    +E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 50  LGTGSFGRVMLVKHKETGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 99
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E + G  ++  LR+    S P    R  A Q++    +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 157
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T 
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTW 197
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 198 X-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 39/220 (17%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 160
           +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 50  LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 104
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 162
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +I+ DLKPEN+L+    YI+V D+           + KR+           G T      
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTWX---- 198
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
              +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 199 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+    +E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 98
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E + G  ++  LR+    S P    R  A Q++    +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTW 196
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 197 X-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+    +E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 98
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E + G  ++  LR+    S P    R  A Q++    +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTW 196
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 197 X-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+    +E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 50  LGTGSFGRVMLVKHKETGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 99
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E + G  ++  LR+    S P    R  A Q++    +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 157
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T 
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTW 197
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 198 X-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 35/228 (15%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR-EAAMIEIEVLQQLAKHDKGG 157
           ++I  ++G+G FG+V +  ++E   + A K++    +   E  ++EIE+L          
Sbjct: 21  WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATC-----DH 75
Query: 158 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
              V++   + +   + I+ E       D +     R      ++ + RQ+LE + F+H 
Sbjct: 76  PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 135
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
             +IH DLK  NVL+     I++ D+  S    K                      T ++
Sbjct: 136 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK----------------------TLQK 173
Query: 278 PDQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGE 320
            D    + T ++ APEV++        + Y  DIWS+G  L+E+   E
Sbjct: 174 RDS--FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 219

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 35/228 (15%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR-EAAMIEIEVLQQLAKHDKGG 157
           ++I  ++G+G FG+V +  ++E   + A K++    +   E  ++EIE+L     H    
Sbjct: 13  WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILAT-CDHP--- 68
Query: 158 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
              V++   + +   + I+ E       D +     R      ++ + RQ+LE + F+H 
Sbjct: 69  -YIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 127
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
             +IH DLK  NVL+     I++ D+  S    K                      T ++
Sbjct: 128 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK----------------------TLQK 165
Query: 278 PDQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGE 320
            D    + T ++ APEV++        + Y  DIWS+G  L+E+   E
Sbjct: 166 RDS--FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 211

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 39/220 (17%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 160
           +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 42  LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 96
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 97  VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 154
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +I+ DLKPEN+L+    YI+V D+           + KR+           G T      
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTWX---- 190
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
              +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 191 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 76/345 (22%), Positives = 132/345 (38%), Gaps = 78/345 (22%)
Query: 99  YKIHSKM-GEGTFGQVLECWDRERKEMVAIKIV-RGIKKYREAAMIEIEVLQQLAKHDKG 156
           YK+ S++ GEG + +V      +  +  A+KI+ +     R     E+E L Q     +G
Sbjct: 14  YKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQC----QG 69
Query: 157 GNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
               +++  +F+      +VFEKL G S+   ++K  +  F       + R +   + F+
Sbjct: 70  NKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKH--FNEREASRVVRDVAAALDFL 127
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF----- 270
           H   + H DLKPEN+L  S E                        K S +K+ DF     
Sbjct: 128 HTKGIAHRDLKPENILCESPE------------------------KVSPVKICDFDLGSG 163
Query: 271 -----GSTTYERPDQNYIVSTRHYRAPEVI-----LGLGWTYPCDIWSVGCILVELCTGE 320
                  T    P+      +  Y APEV+         +   CD+WS+G +L  + +G 
Sbjct: 164 MKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGY 223
Query: 321 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK 380
             F  H   +         G     + +       + ++ G+ ++P+   +         
Sbjct: 224 PPFVGHCGAD--------CGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWA--------- 266
Query: 381 LPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 425
                     H+   A D   L+  LL  D   RL+A + L+HP+
Sbjct: 267 ----------HISSEAKD---LISKLLVRDAKQRLSAAQVLQHPW 298

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 39/220 (17%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 160
           +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 50  LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 104
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V++   F   +++ +V E   G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 105 VKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 162
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +I+ DLKPEN+++    YIKV D+           + KR+           G T      
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDF----------GFAKRVK----------GRTWX---- 198
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
              +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 199 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 46/246 (18%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-EIEVLQQLAKHDKG 156
           +Y    K+G+G  G V    D    + VAI+ +   ++ ++  +I EI V+++       
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE------- 73
Query: 157 GNRCVQIRNWFD---YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
            N+   I N+ D     + + +V E L G SL D + +       I  V    R+ L+ +
Sbjct: 74  -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQAL 129
Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
            F+H   +IH D+K +N+LL                               ++K+ DFG 
Sbjct: 130 EFLHSNQVIHRDIKSDNILL---------------------------GMDGSVKLTDFGF 162
Query: 273 TTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 329
                P+Q   + +V T ++ APEV+    +    DIWS+G + +E+  GE  +     L
Sbjct: 163 CAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL 222
Query: 330 EHLAMM 335
             L ++
Sbjct: 223 RALYLI 228

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 36/249 (14%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           + I   +G+G FG V    +R+ K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 14  FDIGRPLGKGKFGNVYLARERQSKFILALKVL--FKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 157 GNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            N  +++  +F     + ++ E   LG+ +Y  L+K +   F          +L   +++
Sbjct: 72  PN-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQKLS--RFDEQRTATYITELANALSY 127
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN+LL S+  +K+ D+  S+H P                        
Sbjct: 128 CHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR--------------------- 166
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                +  +  T  Y  PE+I G       D+WS+G +  E   G   F+ H   E    
Sbjct: 167 -----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRR 221
Query: 335 MERVLGPLP 343
           + RV    P
Sbjct: 222 ISRVEFTFP 230

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 105/251 (41%), Gaps = 39/251 (15%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHD 154
           +++H  +G+G+FG+V     ++  +  AIK ++     +    E  M+E  VL    +H 
Sbjct: 20  FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKL--GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
                   +   F  + ++  V E L  G  +Y      +   F +      A +++  +
Sbjct: 80  ----FLTHMFCTFQTKENLFFVMEYLNGGDLMYHI---QSCHKFDLSRATFYAAEIILGL 132
Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
            F+H   +++ DLK +N+LL    +IK+ D+               M K + +     G 
Sbjct: 133 QFLHSKGIVYRDLKLDNILLDKDGHIKIADFG--------------MCKENML-----GD 173
Query: 273 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLE 330
                   N    T  Y APE++LG  + +  D WS G +L E+  G++ F  Q  E L 
Sbjct: 174 AK-----TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF 228
Query: 331 HLAMMERVLGP 341
           H   M+    P
Sbjct: 229 HSIRMDNPFYP 239

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 46/246 (18%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-EIEVLQQLAKHDKG 156
           +Y    K+G+G  G V    D    + VAI+ +   ++ ++  +I EI V+++       
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE------- 73
Query: 157 GNRCVQIRNWFD---YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
            N+   I N+ D     + + +V E L G SL D + +       I  V    R+ L+ +
Sbjct: 74  -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQAL 129
Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
            F+H   +IH D+K +N+LL                               ++K+ DFG 
Sbjct: 130 EFLHSNQVIHRDIKSDNILL---------------------------GMDGSVKLTDFGF 162
Query: 273 TTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 329
                P+Q   + +V T ++ APEV+    +    DIWS+G + +E+  GE  +     L
Sbjct: 163 CAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL 222
Query: 330 EHLAMM 335
             L ++
Sbjct: 223 RALYLI 228

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 108/241 (44%), Gaps = 34/241 (14%)
Query: 100 KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++  ++G G FG+V +  W+   K  VAIK ++      E+ + E +++++L KHDK   
Sbjct: 12  QLIKRLGNGQFGEVWMGTWNGNTK--VAIKTLKPGTMSPESFLEEAQIMKKL-KHDK--- 65
Query: 159 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             VQ+         I IV E +   SL DFL+    R+  +  + ++A Q+   +A++  
Sbjct: 66  -LVQLYAVVS-EEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER 123
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
           +  IH DL+  N+L+ +    K+ D+  +    +D+    R      IK           
Sbjct: 124 MNYIHRDLRSANILVGNGLICKIADFGLA-RLIEDNEXTARQGAKFPIK----------- 171
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 336
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 172 -----------WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVE 220
Query: 337 R 337
           R
Sbjct: 221 R 221

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 108/264 (40%), Gaps = 52/264 (19%)
Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKG 156
           S +++   +G+G+FG+V               +VR + +     +  ++VL++     + 
Sbjct: 28  SHFELLKVLGQGSFGKVF--------------LVRKVTRPDSGHLYAMKVLKKATLKVRD 73
Query: 157 GNRCVQIRNWFDYRNHICIV-----FEKLGSS--LYDFLRKNNYRS-------FPIDLVR 202
             R    R+     NH  +V     F+  G    + DFLR  +  +       F  + V+
Sbjct: 74  RVRTKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVK 133
Query: 203 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 262
               +L   +  +H L +I+ DLKPEN+LL    +IK+ D+  S                
Sbjct: 134 FYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS---------------- 177
Query: 263 SAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL 322
              + ID     Y          T  Y APEV+   G ++  D WS G ++ E+ TG   
Sbjct: 178 --KEAIDHEKKAYS------FCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
Query: 323 FQTHENLEHLAMMERVLGPLPQHM 346
           FQ  +  E + ++ +    +PQ +
Sbjct: 230 FQGKDRKETMTLILKAKLGMPQFL 253

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 97/225 (43%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+     E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 49  IGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 98
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E + G  ++  LR+    S P    R  A Q++    +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+L+    YIKV D+           + KR+           G T 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADF----------GFAKRVK----------GRTW 196
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 197 X-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+    +E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 36  LGTGSFGRVMLVKHKESGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 85
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E + G  ++  LR+    S P    R  A Q++    +
Sbjct: 86  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 143
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T 
Sbjct: 144 LHSLDLIYRDLKPENLLIDEQGYIQVTDF----------GFAKRVK----------GRTW 183
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 184 X-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 46/246 (18%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-EIEVLQQLAKHDKG 156
           +Y    K+G+G  G V    D    + VAI+ +   ++ ++  +I EI V+++       
Sbjct: 22  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE------- 74
Query: 157 GNRCVQIRNWFD---YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
            N+   I N+ D     + + +V E L G SL D + +       I  V    R+ L+ +
Sbjct: 75  -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQAL 130
Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
            F+H   +IH D+K +N+LL                               ++K+ DFG 
Sbjct: 131 EFLHSNQVIHRDIKSDNILL---------------------------GMDGSVKLTDFGF 163
Query: 273 TTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 329
                P+Q   + +V T ++ APEV+    +    DIWS+G + +E+  GE  +     L
Sbjct: 164 CAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL 223
Query: 330 EHLAMM 335
             L ++
Sbjct: 224 RALYLI 229

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/335 (21%), Positives = 132/335 (39%), Gaps = 85/335 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           ++I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 36  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 157 GNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++
Sbjct: 94  PN-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSY 149
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN+LL S+  +K+ D+  S+H P                       +
Sbjct: 150 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----------------------S 186
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
             R D   +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 187 SRRDD---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 243
Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           + RV    P             +V  G  D                              
Sbjct: 244 ISRVEFTFPD------------FVTEGARD------------------------------ 261
Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  L+  LL+++P+ R   RE L HP+ T +
Sbjct: 262 -------LISRLLKHNPSQRPMLREVLEHPWITAN 289

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 102/233 (43%), Gaps = 36/233 (15%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHD 154
           RY     +G+G F +  E  D + KE+ A K+V     +K +++  M       ++A H 
Sbjct: 43  RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS-----TEIAIHK 97
Query: 155 KGGN-RCVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECI 212
              N   V    +F+  + + +V E     SL +  ++    + P    R   RQ ++ +
Sbjct: 98  SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP--EARYFMRQTIQGV 155
Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
            ++H+  +IH DLK  N+ L     +K+ D+                    A K+     
Sbjct: 156 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDF------------------GLATKI----- 192
Query: 273 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 325
             ++   +  +  T +Y APEV+   G ++  DIWS+GCIL  L  G+  F+T
Sbjct: 193 -EFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 244

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 46/246 (18%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-EIEVLQQLAKHDKG 156
           +Y    K+G+G  G V    D    + VAI+ +   ++ ++  +I EI V+++       
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE------- 73
Query: 157 GNRCVQIRNWFD---YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
            N+   I N+ D     + + +V E L G SL D + +       I  V    R+ L+ +
Sbjct: 74  -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQAL 129
Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
            F+H   +IH D+K +N+LL                               ++K+ DFG 
Sbjct: 130 EFLHSNQVIHRDIKSDNILL---------------------------GMDGSVKLTDFGF 162
Query: 273 TTYERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 329
                P+Q+    +V T ++ APEV+    +    DIWS+G + +E+  GE  +     L
Sbjct: 163 CAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL 222
Query: 330 EHLAMM 335
             L ++
Sbjct: 223 RALYLI 228

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 102/233 (43%), Gaps = 36/233 (15%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHD 154
           RY     +G+G F +  E  D + KE+ A K+V     +K +++  M       ++A H 
Sbjct: 43  RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS-----TEIAIHK 97
Query: 155 KGGN-RCVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECI 212
              N   V    +F+  + + +V E     SL +  ++    + P    R   RQ ++ +
Sbjct: 98  SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP--EARYFMRQTIQGV 155
Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
            ++H+  +IH DLK  N+ L     +K+ D+                    A K+     
Sbjct: 156 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDF------------------GLATKI----- 192
Query: 273 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 325
             ++   +  +  T +Y APEV+   G ++  DIWS+GCIL  L  G+  F+T
Sbjct: 193 -EFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 244

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/335 (21%), Positives = 130/335 (38%), Gaps = 85/335 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           ++I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 36  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 157 GNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++
Sbjct: 94  PN-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSY 149
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN+LL S+  +K+ D+  S+H P                        
Sbjct: 150 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--------------------- 188
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 189 -----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 243
Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           + RV    P             +V  G  D                              
Sbjct: 244 ISRVEFTFPD------------FVTEGARD------------------------------ 261
Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  L+  LL+++P+ R   RE L HP+ T +
Sbjct: 262 -------LISRLLKHNPSQRPMLREVLEHPWITAN 289

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 92/225 (40%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+     E     A+KI   + K +   + EIE       H     R +Q  
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKEIE-------HTLNEKRILQAV 98
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E   G  ++  LR+    S P    R  A Q++    +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+++    YIKV                            DFG   
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIKV---------------------------TDFGLAK 189
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
             +     +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/335 (21%), Positives = 131/335 (39%), Gaps = 85/335 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           ++I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 11  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 157 GNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++
Sbjct: 69  PN-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSY 124
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN+LL S+  +K+ D+  S+H P                        
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--------------------- 163
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                ++ +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 164 -----RDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 218
Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           + RV    P             +V  G  D                              
Sbjct: 219 ISRVEFTFPD------------FVTEGARD------------------------------ 236
Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  L+  LL+++P+ R   RE L HP+ T +
Sbjct: 237 -------LISRLLKHNPSQRPMLREVLEHPWITAN 264

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 100 KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 240
Query: 159 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 241 -LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 298
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
           +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 346
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 336
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 347 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 395
Query: 337 R 337
           R
Sbjct: 396 R 396

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 100 KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 240
Query: 159 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 241 -LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 298
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
           +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 346
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 336
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 347 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 395
Query: 337 R 337
           R
Sbjct: 396 R 396

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/335 (21%), Positives = 130/335 (38%), Gaps = 85/335 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           ++I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 157 GNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++
Sbjct: 68  PN-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSY 123
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN+LL S+  +K+ D+  S+H P                        
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--------------------- 162
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 163 -----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 217
Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           + RV    P             +V  G  D                              
Sbjct: 218 ISRVEFTFPD------------FVTEGARD------------------------------ 235
Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  L+  LL+++P+ R   RE L HP+ T +
Sbjct: 236 -------LISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 73/335 (21%), Positives = 132/335 (39%), Gaps = 85/335 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           ++I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 157 GNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++
Sbjct: 73  PN-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSY 128
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN+LL S+  +K+ D+  S+H P                       +
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----------------------S 165
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
             R D   +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 166 SRRTD---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 222
Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           + RV    P             +V  G  D                              
Sbjct: 223 ISRVEFTFPD------------FVTEGARD------------------------------ 240
Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  L+  LL+++P+ R   RE L HP+ T +
Sbjct: 241 -------LISRLLKHNPSQRPMLREVLEHPWITAN 268

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 78/339 (23%), Positives = 131/339 (38%), Gaps = 81/339 (23%)
Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEV-LQQLAK 152
            T  Y++  ++G+G F  V  C      +  A  I+   K   R+   +E E  + +L K
Sbjct: 9   FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLK 68
Query: 153 HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
           H       V++ +      H  ++F+ + G  L++ +    Y S   D    I +Q+LE 
Sbjct: 69  HPN----IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS-EADASHCI-QQILEA 122
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           +   H + ++H +LKPEN+LL S                          K +A+K+ DFG
Sbjct: 123 VLHCHQMGVVHRNLKPENLLLASK------------------------LKGAAVKLADFG 158
Query: 272 STTYERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 328
                  +Q        T  Y +PEV+    +  P D+W+ G IL  L  G   F   + 
Sbjct: 159 LAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED- 217
Query: 329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 388
                          QH L        + ++ G  D+P               P    + 
Sbjct: 218 ---------------QHRLY-------QQIKAGAYDFPS--------------PEWDTVT 241
Query: 389 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
            +  D        L+  +L  +P+ R+TA EAL+HP+ +
Sbjct: 242 PEAKD--------LINKMLTINPSKRITAAEALKHPWIS 272

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 71/335 (21%), Positives = 130/335 (38%), Gaps = 85/335 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           ++I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 27  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 84
Query: 157 GNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++
Sbjct: 85  PN-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSY 140
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN+LL S+  +K+ D+  S+H P                        
Sbjct: 141 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--------------------- 179
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 180 -----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 234
Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           + RV    P             +V  G  D                              
Sbjct: 235 ISRVEFTFPD------------FVTEGARD------------------------------ 252
Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  L+  LL+++P+ R   RE L HP+ T +
Sbjct: 253 -------LISRLLKHNPSQRPMLREVLEHPWITAN 280

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 73/335 (21%), Positives = 132/335 (39%), Gaps = 85/335 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           ++I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 11  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 157 GNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++
Sbjct: 69  PN-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSY 124
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN+LL S+  +K+ D+  S+H P                       +
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----------------------S 161
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
             R D   +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 162 SRRTD---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 218
Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           + RV    P             +V  G  D                              
Sbjct: 219 ISRVEFTFPD------------FVTEGARD------------------------------ 236
Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  L+  LL+++P+ R   RE L HP+ T +
Sbjct: 237 -------LISRLLKHNPSQRPMLREVLEHPWITAN 264

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 100 KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 74
Query: 159 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 75  -LVQLYAVVS-EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
           +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 180
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 336
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 181 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 337 R 337
           R
Sbjct: 230 R 230

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 100 KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 240
Query: 159 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 241 -LVQLYAVVS-EEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 298
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
           +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 299 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 346
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 336
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 347 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 395
Query: 337 R 337
           R
Sbjct: 396 R 396

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+     E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 50  LGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 99
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E + G  ++  LR+    S P    R  A Q++    +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 157
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+L+    YI+V D+           + KR+   +           
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVKGRTWT--------- 198
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 199 --------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 98/225 (43%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+    +E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 98
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E + G  ++  LR+    + P    R  A Q++    +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEP--HARFYAAQIVLTFEY 156
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTW 196
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 197 X-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 100 KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 14  RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 67
Query: 159 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 68  -LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 125
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
           +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 126 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 173
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 336
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 174 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 222
Query: 337 R 337
           R
Sbjct: 223 R 223

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 102/233 (43%), Gaps = 36/233 (15%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHD 154
           RY     +G+G F +  E  D + KE+ A K+V     +K +++  M       ++A H 
Sbjct: 43  RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS-----TEIAIHK 97
Query: 155 KGGN-RCVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECI 212
              N   V    +F+  + + +V E     SL +  ++    + P    R   RQ ++ +
Sbjct: 98  SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP--EARYFMRQTIQGV 155
Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
            ++H+  +IH DLK  N+ L     +K+ D+                    A K+     
Sbjct: 156 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDF------------------GLATKI----- 192
Query: 273 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 325
             ++   +  +  T +Y APEV+   G ++  DIWS+GCIL  L  G+  F+T
Sbjct: 193 -EFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET 244

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 74/332 (22%), Positives = 130/332 (39%), Gaps = 80/332 (24%)
Query: 102 HSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCV 161
           + K+GEG+ G V    ++     VA+K++   K+ R   +    V+ +  +H       V
Sbjct: 50  YVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH----FNVV 105
Query: 162 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           ++   +     + ++ E L G +L D + +       I  V E    +L+ +A++H   +
Sbjct: 106 EMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCE---AVLQALAYLHAQGV 162
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 280
           IH D+K +++LL     +K+ D+       KD                         P +
Sbjct: 163 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV------------------------PKR 198
Query: 281 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLG 340
             +V T ++ APEVI    +    DIWS+G +++E+  GE  + +               
Sbjct: 199 KXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS------------- 245
Query: 341 PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD-L 399
             P   +KR+             D P               P+L+N       H     L
Sbjct: 246 --PVQAMKRLR------------DSPP--------------PKLKN------SHKVSPVL 271
Query: 400 THLLQGLLRYDPTDRLTAREALRHPFFTRDHL 431
              L+ +L  DP +R TA+E L HPF  +  L
Sbjct: 272 RDFLERMLVRDPQERATAQELLDHPFLLQTGL 303

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 98/225 (43%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+    +E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 98
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E + G  ++  LR+    S P    R  A Q++    +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTW 196
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T  Y APE+IL  G+    D W++G ++ ++  G
Sbjct: 197 X-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 111/254 (43%), Gaps = 36/254 (14%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHD 154
           RY     +G+G F +  E  D + KE+ A K+V     +K +++  M       ++A H 
Sbjct: 27  RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS-----TEIAIHK 81
Query: 155 KGGN-RCVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECI 212
              N   V    +F+  + + +V E     SL +  ++    + P    R   RQ ++ +
Sbjct: 82  SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP--EARYFMRQTIQGV 139
Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
            ++H+  +IH DLK  N+ L     +K+ D+                    A K+     
Sbjct: 140 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDF------------------GLATKI----- 176
Query: 273 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 332
             ++   +  +  T +Y APEV+   G ++  DIWS+GCIL  L  G+  F+T    E  
Sbjct: 177 -EFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETY 235
Query: 333 AMMERVLGPLPQHM 346
             +++    +P+H+
Sbjct: 236 IRIKKNEYSVPRHI 249

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 95/231 (41%), Gaps = 43/231 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIK---IVRGIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           K+GEG+FG+ +     E      IK   I R   K RE +  E+ VL  + KH       
Sbjct: 31  KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM-KHP----NI 85
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           VQ R  F+    + IV +   G  L+  +       F  D + +   Q+   +  +HD  
Sbjct: 86  VQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK 145
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-----STT 274
           ++H D+K +N+ L                            K   +++ DFG     ++T
Sbjct: 146 ILHRDIKSQNIFLT---------------------------KDGTVQLGDFGIARVLNST 178
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 325
            E       + T +Y +PE+     +    DIW++GC+L ELCT +  F+ 
Sbjct: 179 VELARA--CIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA 227

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 71/335 (21%), Positives = 131/335 (39%), Gaps = 85/335 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           ++I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 14  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 71
Query: 157 GNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            N  +++  +F     + ++ E   LG+ +Y  L+K +   F          +L   +++
Sbjct: 72  PN-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQKLS--KFDEQRTATYITELANALSY 127
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN+LL S+  +K+ D+  S+H P                        
Sbjct: 128 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--------------------- 166
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 167 -----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 221
Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           + RV    P             +V  G  D                              
Sbjct: 222 ISRVEFTFPD------------FVTEGARD------------------------------ 239
Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  L+  LL+++P+ R   RE L HP+ T +
Sbjct: 240 -------LISRLLKHNPSQRPMLREVLEHPWITAN 267

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 104/251 (41%), Gaps = 39/251 (15%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHD 154
           + +H  +G+G+FG+V     ++  +  AIK ++     +    E  M+E  VL    +H 
Sbjct: 19  FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78
Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKL--GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
                   +   F  + ++  V E L  G  +Y      +   F +      A +++  +
Sbjct: 79  ----FLTHMFCTFQTKENLFFVMEYLNGGDLMYHI---QSCHKFDLSRATFYAAEIILGL 131
Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
            F+H   +++ DLK +N+LL    +IK+ D+               M K + +     G 
Sbjct: 132 QFLHSKGIVYRDLKLDNILLDKDGHIKIADFG--------------MCKENML-----GD 172
Query: 273 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLE 330
                   N    T  Y APE++LG  + +  D WS G +L E+  G++ F  Q  E L 
Sbjct: 173 AK-----TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF 227
Query: 331 HLAMMERVLGP 341
           H   M+    P
Sbjct: 228 HSIRMDNPFYP 238

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 71/335 (21%), Positives = 130/335 (38%), Gaps = 85/335 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           ++I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 157 GNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++
Sbjct: 73  PN-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSY 128
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN+LL S+  +K+ D+  S+H P                        
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--------------------- 167
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 168 -----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 222
Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           + RV    P             +V  G  D                              
Sbjct: 223 ISRVEFTFPD------------FVTEGARD------------------------------ 240
Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  L+  LL+++P+ R   RE L HP+ T +
Sbjct: 241 -------LISRLLKHNPSQRPMLREVLEHPWITAN 268

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 39/220 (17%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 160
           +G G+FG+V+     E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 103
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 161
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +I+ DLKPEN+L+    YI+V D+           + KR+           G T      
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTWX---- 197
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
              +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 198 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+    +E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 70  LGTGSFGRVMLVKHKESGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 119
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E + G  ++  LR+     F     R  A Q++    +
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEY 177
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T 
Sbjct: 178 LHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTW 217
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 218 X-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/335 (21%), Positives = 129/335 (38%), Gaps = 85/335 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           ++I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 157 GNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++
Sbjct: 73  PN-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSY 128
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN+LL S+  +K+ D+  S+H P                        
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--------------------- 167
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                +  +  T  Y  PE I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 168 -----RTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 222
Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           + RV    P             +V  G  D                              
Sbjct: 223 ISRVEFTFPD------------FVTEGARD------------------------------ 240
Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  L+  LL+++P+ R   RE L HP+ T +
Sbjct: 241 -------LISRLLKHNPSQRPXLREVLEHPWITAN 268

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/335 (21%), Positives = 130/335 (38%), Gaps = 85/335 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           ++I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 157 GNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++
Sbjct: 68  PN-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSY 123
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN+LL S+  +K+ D+  S+H P                        
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--------------------- 162
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 163 -----RTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 217
Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           + RV    P             +V  G  D                              
Sbjct: 218 ISRVEFTFPD------------FVTEGARD------------------------------ 235
Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  L+  LL+++P+ R   RE L HP+ T +
Sbjct: 236 -------LISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/335 (21%), Positives = 131/335 (39%), Gaps = 85/335 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           ++I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 157 GNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            N  +++  +F     + ++ E   LG+ +Y  L+K +   F          +L   +++
Sbjct: 68  PN-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQKLS--KFDEQRTATYITELANALSY 123
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN+LL S+  +K+ D+  S+H P                        
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--------------------- 162
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 163 -----RTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 217
Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           + RV    P             +V  G  D                              
Sbjct: 218 ISRVEFTFPD------------FVTEGARD------------------------------ 235
Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  L+  LL+++P+ R   RE L HP+ T +
Sbjct: 236 -------LISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+     E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 98
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E + G  ++  LR+    S P    R  A Q++    +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTW 196
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 197 X-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+     E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 98
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E + G  ++  LR+    S P    R  A Q++    +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTW 196
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 197 X-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+     E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 98
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E + G  ++  LR+    S P    R  A Q++    +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTW 196
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 197 X-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 39/220 (17%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 160
           +G G+FG+V+     E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 50  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 104
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 162
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +I+ DLKPEN+L+    YI+V D+           + KR+           G T      
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTWX---- 198
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
              +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 199 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/335 (21%), Positives = 132/335 (39%), Gaps = 85/335 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           ++I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 157 GNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            N  +++  +F     + ++ E   LG+ +Y  L+K +   F          +L   +++
Sbjct: 71  PN-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQKLS--KFDEQRTATYITELANALSY 126
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN+LL S+  +K+ D+  S+H P                        
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---------------------- 164
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
             R D   +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 165 -RRDD---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 220
Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           + RV    P             +V  G  D                              
Sbjct: 221 ISRVEFTFPD------------FVTEGARD------------------------------ 238
Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  L+  LL+++P+ R   RE L HP+ T +
Sbjct: 239 -------LISRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 35/230 (15%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G+G FGQV++  +       AIK +R  ++     + E+ +L  L       N    +R
Sbjct: 14  LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL-------NHQYVVR 66
Query: 165 ---NWFDYRNHI---------CIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQL 208
               W + RN +           +F ++      +LYD +   N      +  R + RQ+
Sbjct: 67  YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR-LFRQI 125
Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
           LE ++++H   +IH DLKP N+ +  S  +K+ D+  +          K + +S  I  +
Sbjct: 126 LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA----------KNVHRSLDILKL 175
Query: 269 DFGSTTYERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELC 317
           D  +      +    + T  Y A EV+ G G +    D++S+G I  E+ 
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/335 (21%), Positives = 130/335 (38%), Gaps = 85/335 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           ++I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 157 GNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++
Sbjct: 71  PN-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSY 126
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN+LL S+  +K+ D+  S+H P                        
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--------------------- 165
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 166 -----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 220
Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           + RV    P             +V  G  D                              
Sbjct: 221 ISRVEFTFPD------------FVTEGARD------------------------------ 238
Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  L+  LL+++P+ R   RE L HP+ T +
Sbjct: 239 -------LISRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/336 (22%), Positives = 134/336 (39%), Gaps = 98/336 (29%)
Query: 99  YKIHSK-MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG 157
           YK+ S+ +G G  G+VL+ +++  +E  A+K+++   K R     E+E L   A      
Sbjct: 19  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVE-LHWRASQCPHI 73
Query: 158 NRCVQI-RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            R V +  N +  R  + IV E L G  L+  ++    ++F      EI + + E I ++
Sbjct: 74  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 133
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG---S 272
           H + + H D+KPEN+L  S    K P+                    + +K+ DFG    
Sbjct: 134 HSINIAHRDVKPENLLYTS----KRPN--------------------AILKLTDFGFAKE 169
Query: 273 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 332
           TT E+ D++                      CD+WS+G I+  L  G   F ++  L   
Sbjct: 170 TTGEKYDKS----------------------CDMWSLGVIMYILLCGYPPFYSNHGLA-- 205
Query: 333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 392
                            +    +  +R G+ ++P    S  S +  M             
Sbjct: 206 -----------------ISPGMKTRIRMGQYEFPNPEWSEVSEEVKM------------- 235
Query: 393 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                    L++ LL+ +PT R+T  E + HP+  +
Sbjct: 236 ---------LIRNLLKTEPTQRMTITEFMNHPWIMQ 262

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 106/241 (43%), Gaps = 44/241 (18%)
Query: 100 KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           K+  K+G G FG+V +  +++  K  VA+K ++      EA + E  V++ L +HDK   
Sbjct: 185 KLEKKLGAGQFGEVWMATYNKHTK--VAVKTMKPGSMSVEAFLAEANVMKTL-QHDK--- 238
Query: 159 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             V++      +  I I+ E +   SL DFL+ +     P+  + + + Q+ E +AF+  
Sbjct: 239 -LVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 296
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
              IH DL+  N+L+ +S   K+ D+              R+     IK           
Sbjct: 297 RNYIHRDLRAANILVSASLVCKIADFG-----------LARVGAKFPIK----------- 334
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 336
                      + APE I    +T   D+WS G +L+E+ T G   +    N E +  +E
Sbjct: 335 -----------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE 383
Query: 337 R 337
           R
Sbjct: 384 R 384

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/335 (21%), Positives = 131/335 (39%), Gaps = 85/335 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           ++I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 157 GNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++
Sbjct: 68  PN-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSY 123
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN+LL S+  +K+ D+  S+H P                        
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---------------------- 161
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
             R D   +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 162 -RRTD---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 217
Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           + RV    P             +V  G  D                              
Sbjct: 218 ISRVEFTFPD------------FVTEGARD------------------------------ 235
Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  L+  LL+++P+ R   RE L HP+ T +
Sbjct: 236 -------LISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 108/241 (44%), Gaps = 34/241 (14%)
Query: 100 KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 188 RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGNMSPEAFLQEAQVMKKL-RHEK--- 241
Query: 159 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 242 -LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 299
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
           +  +H DL+  N+L+  +   KV D+       +D+ Y  R      IK           
Sbjct: 300 MNYVHRDLRAANILVGENLVCKVADFGLG-RLIEDNEYTARQGAKFPIK----------- 347
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 336
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 348 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 396
Query: 337 R 337
           R
Sbjct: 397 R 397

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/335 (21%), Positives = 131/335 (39%), Gaps = 85/335 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           ++I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 157 GNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++
Sbjct: 68  PN-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSY 123
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN+LL S+  +K+ D+  S+H P                        
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---------------------- 161
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
             R D   +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 162 -RRTD---LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 217
Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           + RV    P             +V  G  D                              
Sbjct: 218 ISRVEFTFPD------------FVTEGARD------------------------------ 235
Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  L+  LL+++P+ R   RE L HP+ T +
Sbjct: 236 -------LISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 100 KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 74
Query: 159 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 75  -LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
           +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 180
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 336
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 181 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 337 R 337
           R
Sbjct: 230 R 230

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 39/220 (17%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 160
           +G G+FG+V+     E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 35  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 89
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V++   F   +++ +V E + G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 90  VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 147
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +I+ DLKPEN+L+    YI+V D+           + KR+   +                
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVKGRTWT-------------- 183
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
              +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 184 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/335 (21%), Positives = 131/335 (39%), Gaps = 85/335 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           ++I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 9   FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 66
Query: 157 GNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            N  +++  +F     + ++ E   LG+ +Y  L+K +   F          +L   +++
Sbjct: 67  PN-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQKLS--KFDEQRTATYITELANALSY 122
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN+LL S+  +K+ D+  S+H P                        
Sbjct: 123 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--------------------- 161
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 162 -----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 216
Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           + RV    P             +V  G  D                              
Sbjct: 217 ISRVEFTFPD------------FVTEGARD------------------------------ 234
Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  L+  LL+++P+ R   RE L HP+ T +
Sbjct: 235 -------LISRLLKHNPSQRPMLREVLEHPWITAN 262

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/335 (21%), Positives = 130/335 (38%), Gaps = 85/335 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           ++I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 12  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 157 GNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++
Sbjct: 70  PN-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSY 125
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN+LL S+  +K+ D+  S+H P                        
Sbjct: 126 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--------------------- 164
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 165 -----RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 219
Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           + RV    P             +V  G  D                              
Sbjct: 220 ISRVEFTFPD------------FVTEGARD------------------------------ 237
Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  L+  LL+++P+ R   RE L HP+ T +
Sbjct: 238 -------LISRLLKHNPSQRPMLREVLEHPWITAN 265

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 98/236 (41%), Gaps = 51/236 (21%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++I   +G G+FG+V     R      A+K+++           EI V  +  +H     
Sbjct: 8   FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKK----------EIVVRLKQVEHTNDER 57
Query: 159 RCVQI-------RNWFDYRN--HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL 208
             + I       R W  +++   I ++ + + G  L+  LRK+  + FP  + +  A ++
Sbjct: 58  LMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEV 115
Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
              + ++H   +I+ DLKPEN+LL                            K+  IK+ 
Sbjct: 116 CLALEYLHSKDIIYRDLKPENILL---------------------------DKNGHIKIT 148
Query: 269 DFGSTTYERPDQNY-IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 323
           DFG   Y  PD  Y +  T  Y APEV+    +    D WS G ++ E+  G   F
Sbjct: 149 DFGFAKY-VPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 96/225 (42%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+     E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 50  LGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 99
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E   G  ++  LR+    S P    R  A Q++    +
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 157
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+++    YIKV D+           + KR+           G T 
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDF----------GFAKRVK----------GRTW 197
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 198 X-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 96/225 (42%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+     E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 50  LGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 99
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E   G  ++  LR+    S P    R  A Q++    +
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 157
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+++    YIKV D+           + KR+           G T 
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDF----------GFAKRVK----------GRTW 197
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 198 X-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+    +E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 98
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E + G  ++  LR+    S P    R  A Q++    +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+++    YI+V D+           + KR+           G T 
Sbjct: 157 LHSLDLIYRDLKPENLIIDQQGYIQVTDF----------GFAKRVK----------GRTW 196
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T  Y APE+I+  G+    D W++G ++ E+  G
Sbjct: 197 X-------LCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+    +E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 98
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E + G  ++  LR+     F     R  A Q++    +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEY 156
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTW 196
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 197 X-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 96/220 (43%), Gaps = 39/220 (17%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 160
           +G G+FG+V+     E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 103
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V++   F   +++ +V E   G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 104 VKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 161
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +I+ DLKPEN+++    YIKV D+           + KR+           G T      
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDF----------GFAKRVK----------GRTWX---- 197
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
              +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 198 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+    +E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 98
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E + G  ++  LR+     F     R  A Q++    +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEY 156
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTW 196
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 197 X-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/335 (21%), Positives = 130/335 (38%), Gaps = 85/335 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           ++I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 157 GNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++
Sbjct: 71  PN-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSY 126
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN+LL S+  +K+ D+  S+H P                        
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--------------------- 165
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 166 -----RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 220
Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           + RV    P             +V  G  D                              
Sbjct: 221 ISRVEFTFPD------------FVTEGARD------------------------------ 238
Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  L+  LL+++P+ R   RE L HP+ T +
Sbjct: 239 -------LISRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+    +E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 44  LGTGSFGRVMLVKHKESGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 93
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E + G  ++  LR+     F     R  A Q++    +
Sbjct: 94  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEY 151
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T 
Sbjct: 152 LHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTW 191
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 192 X-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/335 (21%), Positives = 129/335 (38%), Gaps = 85/335 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           ++I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 11  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 157 GNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++
Sbjct: 69  PN-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSY 124
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN+LL S+  +K+ D+  S H P                        
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR--------------------- 163
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 164 -----RTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 218
Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           + RV    P             +V  G  D                              
Sbjct: 219 ISRVEFTFPD------------FVTEGARD------------------------------ 236
Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  L+  LL+++P+ R   RE L HP+ T +
Sbjct: 237 -------LISRLLKHNPSQRPMLREVLEHPWITAN 264

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/335 (21%), Positives = 131/335 (39%), Gaps = 85/335 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           ++I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 157 GNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            N  +++  +F     + ++ E   LG+ +Y  L+K +   F          +L   +++
Sbjct: 71  PN-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQKLS--KFDEQRTATYITELANALSY 126
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN+LL S+  +K+ D+  S+H P                        
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--------------------- 165
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 166 -----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 220
Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           + RV    P             +V  G  D                              
Sbjct: 221 ISRVEFTFPD------------FVTEGARD------------------------------ 238
Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  L+  LL+++P+ R   RE L HP+ T +
Sbjct: 239 -------LISRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 39/220 (17%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 160
           +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 42  LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 96
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V++   F   +++ +V E + G  ++  LR+     F     R  A Q++    ++H L 
Sbjct: 97  VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSLD 154
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +I+ DLKPEN+L+    YI+V D+           + KR+           G T      
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTWX---- 190
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
              +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 191 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 106/239 (44%), Gaps = 35/239 (14%)
Query: 91  LGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI----EIEV 146
           +G+ +  RYKI  K+G G    V    D      VAIK +    + +E  +     E+  
Sbjct: 5   IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHN 64
Query: 147 LQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIA 205
             QL+  +      V + +  +  +   +V E + G +L +++   ++    +D      
Sbjct: 65  SSQLSHQN-----IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE--SHGPLSVDTAINFT 117
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 265
            Q+L+ I   HD+ ++H D+KP+N+L+ S++ +K+ D+  +          K + ++S  
Sbjct: 118 NQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIA----------KALSETSLT 167
Query: 266 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
           +              N+++ T  Y +PE   G       DI+S+G +L E+  GE  F 
Sbjct: 168 QT-------------NHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/335 (21%), Positives = 131/335 (39%), Gaps = 85/335 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           ++I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 157 GNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            N  +++  +F     + ++ E   LG+ +Y  L+K +   F          +L   +++
Sbjct: 68  PN-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQKLS--KFDEQRTATYITELANALSY 123
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN+LL S+  +K+ D+  S+H P                        
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--------------------- 162
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 163 -----RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 217
Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           + RV    P             +V  G  D                              
Sbjct: 218 ISRVEFTFPD------------FVTEGARD------------------------------ 235
Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  L+  LL+++P+ R   RE L HP+ T +
Sbjct: 236 -------LISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 35/230 (15%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G+G FGQV++  +       AIK +R  ++     + E+ +L  L       N    +R
Sbjct: 14  LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL-------NHQYVVR 66
Query: 165 ---NWFDYRNHI---------CIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQL 208
               W + RN +           +F ++      +LYD +   N      +  R + RQ+
Sbjct: 67  YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR-LFRQI 125
Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
           LE ++++H   +IH DLKP N+ +  S  +K+ D+  +          K + +S  I  +
Sbjct: 126 LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA----------KNVHRSLDILKL 175
Query: 269 DFGSTTYERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELC 317
           D  +      +    + T  Y A EV+ G G +    D++S+G I  E+ 
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 98/236 (41%), Gaps = 36/236 (15%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK 155
           + RY++   +G G FG      D++  E+VA+K +   +K  E    EI +  +  +H  
Sbjct: 18  SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREI-INHRSLRHPN 76
Query: 156 GGNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                V+ +       H+ IV E   G  L++  R  N   F  D  R   +QL+  +++
Sbjct: 77  ----IVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSY 130
Query: 215 MHDLCMIHTDLKPENVLLVSSEY--IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
            H + + H DLK EN LL  S    +K+ D+  S      +S     PKS+         
Sbjct: 131 AHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYS-----KASVLHSQPKSA--------- 176
Query: 273 TTYERPDQNYIVSTRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHE 327
                      V T  Y APEV+L   +     D+WS G  L  +  G   F+  E
Sbjct: 177 -----------VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/335 (21%), Positives = 131/335 (39%), Gaps = 85/335 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           ++I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 157 GNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            N  +++  +F     + ++ E   LG+ +Y  L+K +   F          +L   +++
Sbjct: 71  PN-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQKLS--KFDEQRTATYITELANALSY 126
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN+LL S+  +K+ D+  S+H P                        
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--------------------- 165
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 166 -----RXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 220
Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           + RV    P             +V  G  D                              
Sbjct: 221 ISRVEFTFPD------------FVTEGARD------------------------------ 238
Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  L+  LL+++P+ R   RE L HP+ T +
Sbjct: 239 -------LISRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/334 (20%), Positives = 127/334 (38%), Gaps = 83/334 (24%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           ++I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 157 GNRCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            N  +++  +F     + ++ E      +Y  L+K     F          +L   +++ 
Sbjct: 73  PN-ILRLYGYFHDATRVYLILEYAPRGEVYKELQK--LSKFDEQRTATYITELANALSYC 129
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 167
Query: 276 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 335
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 168 ----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
Query: 336 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 395
            RV    P             +V  G  D                               
Sbjct: 224 SRVEFTFPD------------FVTEGARD------------------------------- 240
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 241 ------LISRLLKHNPSQRPMLREVLEHPWITAN 268

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+    +E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 98
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E + G  ++  LR+    S P    R  A Q++    +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTW 196
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T  Y AP +IL  G+    D W++G ++ E+  G
Sbjct: 197 X-------LCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 100 KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 12  RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 65
Query: 159 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 66  -LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 123
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
           +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 124 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 171
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 336
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 172 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 220
Query: 337 R 337
           R
Sbjct: 221 R 221

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 100 KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 10  RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 63
Query: 159 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 64  -LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 121
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
           +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 122 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 169
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 336
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 170 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 218
Query: 337 R 337
           R
Sbjct: 219 R 219

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+     E     A+KI   + K +   + EIE       H     R +Q  
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKEIE-------HTLNEKRILQAV 98
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E   G  ++  LR+    S P    R  A Q++    +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+++    YI+V                            DFG   
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIQV---------------------------TDFGLAK 189
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
             +     +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/343 (22%), Positives = 135/343 (39%), Gaps = 79/343 (23%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           Y++   +G G    V   +   +KE VAIK +  ++K + +       + +L K  +  +
Sbjct: 12  YELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN-LEKCQTS-------MDELLKEIQAMS 63
Query: 159 RC-----VQIRNWFDYRNHICIVFEKL-GSSLYDFLR----KNNYRSFPID--LVREIAR 206
           +C     V     F  ++ + +V + L G S+ D ++    K  ++S  +D   +  I R
Sbjct: 64  QCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 123
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           ++LE + ++H    IH D+K  N+LL     +++ D+  S                    
Sbjct: 124 EVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATG-------------- 169
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQT 325
               G  T  +  + + V T  + APEV+  + G+ +  DIWS G   +EL TG A +  
Sbjct: 170 ----GDITRNKVRKTF-VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 224
Query: 326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 385
           +  ++ L +  +   P                          G   +E +K   K  R  
Sbjct: 225 YPPMKVLMLTLQNDPP----------------------SLETGVQDKEMLKKYGKSFR-- 260
Query: 386 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                           ++   L+ DP  R TA E LRH FF +
Sbjct: 261 ---------------KMISLCLQKDPEKRPTAAELLRHKFFQK 288

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+    +E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 98
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E + G  ++  LR+     F     R  A Q++    +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEY 156
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTW 196
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 197 X-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 100 KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 74
Query: 159 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 75  -LVQLYAVVS-EEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
           +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 180
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 336
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 181 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 337 R 337
           R
Sbjct: 230 R 230

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 100 KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 18  RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 71
Query: 159 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             VQ+         I IV E +   SL DFL+    +   +  + +++ Q+   +A++  
Sbjct: 72  -LVQLYAVVS-EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER 129
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
           +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 130 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 177
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 336
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 178 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 226
Query: 337 R 337
           R
Sbjct: 227 R 227

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/327 (22%), Positives = 136/327 (41%), Gaps = 75/327 (22%)
Query: 75  SPPWREDDKDGHYMFALGENLTSRYKIHS---KMGEGTFGQVLECWDRERKEMVAIKIV- 130
           SP    DD D     A  E ++ + +I+S   ++G G   +V +  + E+K++ AIK V 
Sbjct: 32  SPDLGTDDDDKASSSA-NECISVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVN 89
Query: 131 ------RGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSL 184
                 + +  YR     EI  L +L +H    ++ +++ ++     +I +V E     L
Sbjct: 90  LEEADNQTLDSYRN----EIAYLNKLQQH---SDKIIRLYDYEITDQYIYMVMECGNIDL 142
Query: 185 YDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK 244
             +L+K   +S      +   + +LE +  +H   ++H+DLKP N L+V           
Sbjct: 143 NSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----------- 189
Query: 245 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI-----VSTRHYRAPEVILGLG 299
                               +K+IDFG     +PD   +     V T +Y  PE I  + 
Sbjct: 190 -----------------DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 232
Query: 300 WT-----------YPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGP------- 341
            +              D+WS+GCIL  +  G+  FQ  + +  ++ +  ++ P       
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIEFP 290
Query: 342 -LPQHMLKRVDRHAEKYVRRGRLDWPE 367
            +P+  L+ V +   K   + R+  PE
Sbjct: 291 DIPEKDLQDVLKCCLKRDPKQRISIPE 317

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/335 (21%), Positives = 131/335 (39%), Gaps = 85/335 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           ++I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 157 GNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            N  +++  +F     + ++ E   LG+ +Y  L+K +   F          +L   +++
Sbjct: 68  PN-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQKLS--KFDEQRTATYITELANALSY 123
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN+LL S+  +K+ D+  S+H P                        
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--------------------- 162
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 163 -----RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 217
Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           + RV    P             +V  G  D                              
Sbjct: 218 ISRVEFTFPD------------FVTEGARD------------------------------ 235
Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  L+  LL+++P+ R   RE L HP+ T +
Sbjct: 236 -------LISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/343 (22%), Positives = 135/343 (39%), Gaps = 79/343 (23%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           Y++   +G G    V   +   +KE VAIK +  ++K + +       + +L K  +  +
Sbjct: 17  YELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN-LEKCQTS-------MDELLKEIQAMS 68
Query: 159 RC-----VQIRNWFDYRNHICIVFEKL-GSSLYDFLR----KNNYRSFPID--LVREIAR 206
           +C     V     F  ++ + +V + L G S+ D ++    K  ++S  +D   +  I R
Sbjct: 69  QCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 128
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           ++LE + ++H    IH D+K  N+LL     +++ D+  S                    
Sbjct: 129 EVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATG-------------- 174
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQT 325
               G  T  +  + + V T  + APEV+  + G+ +  DIWS G   +EL TG A +  
Sbjct: 175 ----GDITRNKVRKTF-VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 229
Query: 326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 385
           +  ++ L +  +   P                          G   +E +K   K  R  
Sbjct: 230 YPPMKVLMLTLQNDPP----------------------SLETGVQDKEMLKKYGKSFR-- 265
Query: 386 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                           ++   L+ DP  R TA E LRH FF +
Sbjct: 266 ---------------KMISLCLQKDPEKRPTAAELLRHKFFQK 293

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 99/244 (40%), Gaps = 38/244 (15%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR----C 160
           +G+GTFG+V+   ++      A+KI+R     +E  + + EV   + +     N      
Sbjct: 16  LGKGTFGKVILVREKATGRYYAMKILR-----KEVIIAKDEVAHTVTESRVLQNTRHPFL 70
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
             ++  F   + +C V E   G  L+  L +   R F  +  R    +++  + ++H   
Sbjct: 71  TALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRD 128
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +++ D+K EN++L    +IK+ D+        D +  K                      
Sbjct: 129 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--------------------- 167
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMMER 337
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 168 ---FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 224
Query: 338 VLGP 341
           +  P
Sbjct: 225 IRFP 228

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/334 (20%), Positives = 127/334 (38%), Gaps = 83/334 (24%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           ++I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 157 GNRCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            N  +++  +F     + ++ E      +Y  L+K     F          +L   +++ 
Sbjct: 73  PN-ILRLYGYFHDATRVYLILEYAPRGEVYKELQK--LSKFDEQRTATYITELANALSYC 129
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---------------------- 167
Query: 276 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 335
               +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 168 ----RXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
Query: 336 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 395
            RV    P             +V  G  D                               
Sbjct: 224 SRVEFTFPD------------FVTEGARD------------------------------- 240
Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 241 ------LISRLLKHNPSQRPMLREVLEHPWITAN 268

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 99/244 (40%), Gaps = 38/244 (15%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR----C 160
           +G+GTFG+V+   ++      A+KI+R     +E  + + EV   + +     N      
Sbjct: 13  LGKGTFGKVILVREKATGRYYAMKILR-----KEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
             ++  F   + +C V E   G  L+  L +   R F  +  R    +++  + ++H   
Sbjct: 68  TALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRD 125
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +++ D+K EN++L    +IK+ D+        D +  K                      
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX--------------------- 164
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMMER 337
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 165 ---FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 221
Query: 338 VLGP 341
           +  P
Sbjct: 222 IRFP 225

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 99/244 (40%), Gaps = 38/244 (15%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR----C 160
           +G+GTFG+V+   ++      A+KI+R     +E  + + EV   + +     N      
Sbjct: 13  LGKGTFGKVILVREKATGRYYAMKILR-----KEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
             ++  F   + +C V E   G  L+  L +   R F  +  R    +++  + ++H   
Sbjct: 68  TALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRD 125
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +++ D+K EN++L    +IK+ D+        D +  K                      
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--------------------- 164
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMMER 337
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 165 ---FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 221
Query: 338 VLGP 341
           +  P
Sbjct: 222 IRFP 225

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 99/244 (40%), Gaps = 38/244 (15%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR----C 160
           +G+GTFG+V+   ++      A+KI+R     +E  + + EV   + +     N      
Sbjct: 13  LGKGTFGKVILVREKATGRYYAMKILR-----KEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
             ++  F   + +C V E   G  L+  L +   R F  +  R    +++  + ++H   
Sbjct: 68  TALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRD 125
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +++ D+K EN++L    +IK+ D+        D +  K                      
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX--------------------- 164
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMMER 337
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 165 ---FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 221
Query: 338 VLGP 341
           +  P
Sbjct: 222 IRFP 225

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/327 (22%), Positives = 136/327 (41%), Gaps = 75/327 (22%)
Query: 75  SPPWREDDKDGHYMFALGENLTSRYKIHS---KMGEGTFGQVLECWDRERKEMVAIKIV- 130
           SP    DD D     A  E ++ + +I+S   ++G G   +V +  + E+K++ AIK V 
Sbjct: 32  SPDLGTDDDDKASSSA-NECISVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVN 89
Query: 131 ------RGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSL 184
                 + +  YR     EI  L +L +H    ++ +++ ++     +I +V E     L
Sbjct: 90  LEEADNQTLDSYRN----EIAYLNKLQQH---SDKIIRLYDYEITDQYIYMVMECGNIDL 142
Query: 185 YDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK 244
             +L+K   +S      +   + +LE +  +H   ++H+DLKP N L+V           
Sbjct: 143 NSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----------- 189
Query: 245 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI-----VSTRHYRAPEVILGLG 299
                               +K+IDFG     +PD   +     V T +Y  PE I  + 
Sbjct: 190 -----------------DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 232
Query: 300 WT-----------YPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGP------- 341
            +              D+WS+GCIL  +  G+  FQ  + +  ++ +  ++ P       
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ--QIINQISKLHAIIDPNHEIEFP 290
Query: 342 -LPQHMLKRVDRHAEKYVRRGRLDWPE 367
            +P+  L+ V +   K   + R+  PE
Sbjct: 291 DIPEKDLQDVLKCCLKRDPKQRISIPE 317

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/290 (20%), Positives = 123/290 (42%), Gaps = 37/290 (12%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI- 163
           +G GT+GQV +    +  ++ AIK++       E    EI +L++ + H           
Sbjct: 32  VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 164 -RNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 221
            +N     + + +V E  G+ S+ D ++     +   + +  I R++L  ++ +H   +I
Sbjct: 92  KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVI 151
Query: 222 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 281
           H D+K +NVLL  +  +K+ D+  S     D +  +R                      N
Sbjct: 152 HRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRR----------------------N 187
Query: 282 YIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
             + T ++ APEVI         + +  D+WS+G   +E+  G         +  L ++ 
Sbjct: 188 TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP 247
Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 386
           R   P P+   K+  +  + ++    +   +  + R + + +MK P +++
Sbjct: 248 R--NPAPRLKSKKWSKKFQSFIESCLV---KNHSQRPATEQLMKHPFIRD 292

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 120/289 (41%), Gaps = 49/289 (16%)
Query: 100 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 159
           ++   +G G FG V  C  + R + VAIK +   +  R+A ++E+  L ++       N 
Sbjct: 12  EVEEVVGRGAFGVV--CKAKWRAKDVAIKQIES-ESERKAFIVELRQLSRV-------NH 61
Query: 160 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLEC---IAFM 215
              ++ +    N +C+V E   G SLY+ L  +     P           L+C   +A++
Sbjct: 62  PNIVKLYGACLNPVCLVMEYAEGGSLYNVL--HGAEPLPYYTAAHAMSWCLQCSQGVAYL 119
Query: 216 HDL---CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
           H +    +IH DLKP N+LLV+                            + +K+ DFG+
Sbjct: 120 HSMQPKALIHRDLKPPNLLLVAG--------------------------GTVLKICDFGT 153
Query: 273 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 332
               +        +  + APEV  G  ++  CD++S G IL E+ T    F         
Sbjct: 154 ACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR 213
Query: 333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL 381
            M     G  P  ++K + +  E  + R    W +  + R S++ ++K+
Sbjct: 214 IMWAVHNGTRPP-LIKNLPKPIESLMTRC---WSKDPSQRPSMEEIVKI 258

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 99/244 (40%), Gaps = 38/244 (15%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR----C 160
           +G+GTFG+V+   ++      A+KI+R     +E  + + EV   + +     N      
Sbjct: 13  LGKGTFGKVILVREKATGRYYAMKILR-----KEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
             ++  F   + +C V E   G  L+  L +   R F  +  R    +++  + ++H   
Sbjct: 68  TALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRD 125
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +++ D+K EN++L    +IK+ D+        D +  K                      
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--------------------- 164
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMMER 337
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 165 ---FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 221
Query: 338 VLGP 341
           +  P
Sbjct: 222 IRFP 225

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 108/241 (44%), Gaps = 34/241 (14%)
Query: 100 KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 74
Query: 159 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 75  -LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
           +  +H DL   N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 133 MNYVHRDLAAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 180
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 336
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 181 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 337 R 337
           R
Sbjct: 230 R 230

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 106/246 (43%), Gaps = 46/246 (18%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-EIEVLQQLAKHDKG 156
           +Y    K+G+G  G V    D    + VAI+ +   ++ ++  +I EI V+++       
Sbjct: 22  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE------- 74
Query: 157 GNRCVQIRNWFD---YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
            N+   I N+ D     + + +V E L G SL D + +       I  V    R+ L+ +
Sbjct: 75  -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQAL 130
Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
            F+H   +IH ++K +N+LL                               ++K+ DFG 
Sbjct: 131 EFLHSNQVIHRNIKSDNILL---------------------------GMDGSVKLTDFGF 163
Query: 273 TTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 329
                P+Q   + +V T ++ APEV+    +    DIWS+G + +E+  GE  +     L
Sbjct: 164 CAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL 223
Query: 330 EHLAMM 335
             L ++
Sbjct: 224 RALYLI 229

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 100 KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V++++ +H+K   
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKI-RHEK--- 74
Query: 159 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 75  -LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
           +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 180
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 336
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 181 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 337 R 337
           R
Sbjct: 230 R 230

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 131/309 (42%), Gaps = 50/309 (16%)
Query: 77  PWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY 136
           PW ED+          E      K+  ++G G FG+V   +     + VA+K ++     
Sbjct: 12  PWWEDE---------WEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMS 61
Query: 137 REAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRS 195
            +A + E  +++QL        R V++      +  I I+ E +   SL DFL+  +   
Sbjct: 62  PDAFLAEANLMKQLQHQ-----RLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIK 115
Query: 196 FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 255
             I+ + ++A Q+ E +AF+ +   IH DL+  N+L+  +   K+ D+  +    +D+ Y
Sbjct: 116 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEY 174
Query: 256 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE 315
             R      IK                      + APE I    +T   D+WS G +L E
Sbjct: 175 TAREGAKFPIK----------------------WTAPEAINYGTFTIKSDVWSFGILLTE 212
Query: 316 LCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAAS 371
           + T G   +    N E +  +ER       + + R D   E+  +  RL W   PE   +
Sbjct: 213 IVTHGRIPYPGMTNPEVIQNLER------GYRMVRPDNCPEELYQLMRLCWKERPEDRPT 266
Query: 372 RESIKSVMK 380
            + ++SV++
Sbjct: 267 FDYLRSVLE 275

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 38/237 (16%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLA-KHD 154
           + RY++   +G G FG      D++  E+VA+K +   +K   AA ++ E++   + +H 
Sbjct: 18  SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKI--AANVKREIINHRSLRHP 75
Query: 155 KGGNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                 V+ +       H+ IV E   G  L++  R  N   F  D  R   +QL+  ++
Sbjct: 76  N----IVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVS 129
Query: 214 FMHDLCMIHTDLKPENVLLVSSEY--IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           + H + + H DLK EN LL  S    +K+ D+  S      SS     PKS+        
Sbjct: 130 YCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYS-----KSSVLHSQPKST-------- 176
Query: 272 STTYERPDQNYIVSTRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHE 327
                       V T  Y APEV+L   +     D+WS G  L  +  G   F+  E
Sbjct: 177 ------------VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 99/244 (40%), Gaps = 38/244 (15%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR----C 160
           +G+GTFG+V+   ++      A+KI+R     +E  + + EV   + +     N      
Sbjct: 18  LGKGTFGKVILVREKATGRYYAMKILR-----KEVIIAKDEVAHTVTESRVLQNTRHPFL 72
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
             ++  F   + +C V E   G  L+  L +   R F  +  R    +++  + ++H   
Sbjct: 73  TALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRD 130
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +++ D+K EN++L    +IK+ D+        D +  K                      
Sbjct: 131 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX--------------------- 169
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMMER 337
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 170 ---FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 226
Query: 338 VLGP 341
           +  P
Sbjct: 227 IRFP 230

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 120/289 (41%), Gaps = 49/289 (16%)
Query: 100 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 159
           ++   +G G FG V  C  + R + VAIK +   +  R+A ++E+  L ++       N 
Sbjct: 11  EVEEVVGRGAFGVV--CKAKWRAKDVAIKQIES-ESERKAFIVELRQLSRV-------NH 60
Query: 160 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLEC---IAFM 215
              ++ +    N +C+V E   G SLY+ L  +     P           L+C   +A++
Sbjct: 61  PNIVKLYGACLNPVCLVMEYAEGGSLYNVL--HGAEPLPYYTAAHAMSWCLQCSQGVAYL 118
Query: 216 HDL---CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
           H +    +IH DLKP N+LLV+                            + +K+ DFG+
Sbjct: 119 HSMQPKALIHRDLKPPNLLLVAG--------------------------GTVLKICDFGT 152
Query: 273 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 332
               +        +  + APEV  G  ++  CD++S G IL E+ T    F         
Sbjct: 153 ACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR 212
Query: 333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL 381
            M     G  P  ++K + +  E  + R    W +  + R S++ ++K+
Sbjct: 213 IMWAVHNGTRPP-LIKNLPKPIESLMTRC---WSKDPSQRPSMEEIVKI 257

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 99/242 (40%), Gaps = 40/242 (16%)
Query: 91  LGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEV 146
           +G N  + ++I  K+G G F +V           VA+K V+       K R   + EI++
Sbjct: 26  MGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDL 85
Query: 147 LQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLR-----KNNYRSFPIDLV 201
           L+QL   +      ++    F   N + IV E   +   D  R     K   R  P   V
Sbjct: 86  LKQLNHPN-----VIKYYASFIEDNELNIVLELADAG--DLSRMIKHFKKQKRLIPERTV 138
Query: 202 REIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPK 261
            +   QL   +  MH   ++H D+KP NV + ++  +K+ D                   
Sbjct: 139 WKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRF------------- 185
Query: 262 SSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 321
                   F S T      + +V T +Y +PE I   G+ +  DIWS+GC+L E+   ++
Sbjct: 186 --------FSSKTTA---AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQS 234
Query: 322 LF 323
            F
Sbjct: 235 PF 236

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHD 154
           +K    +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L    
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 89
Query: 155 KGGNRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
              +    ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ 
Sbjct: 90  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVS 143
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++H   +IH DLKPEN+LL    +I++ D+ ++                   KV+  
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL-- 182
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
            S   ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 183 -SPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 103/229 (44%), Gaps = 40/229 (17%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHD 154
           +K    +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L    
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 89
Query: 155 KGGNRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
              +    ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ 
Sbjct: 90  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGC-LLKYIRKIG--SFDETCTRFYTAEIVS 143
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++H   +IH DLKPEN+LL    +I++ D+ ++                   KV+  
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL-- 182
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
            S   ++   N  V T  Y +PE++     +   D+W++GCI+ +L  G
Sbjct: 183 -SPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 99/244 (40%), Gaps = 38/244 (15%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR----C 160
           +G+GTFG+V+   ++      A+KI+R     +E  + + EV   + +     N      
Sbjct: 13  LGKGTFGKVILVREKATGRYYAMKILR-----KEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
             ++  F   + +C V E   G  L+  L +   R F  +  R    +++  + ++H   
Sbjct: 68  TALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRD 125
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +++ D+K EN++L    +IK+ D+        D +  K                      
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX--------------------- 164
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMMER 337
                 T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME 
Sbjct: 165 ---FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE 221
Query: 338 VLGP 341
           +  P
Sbjct: 222 IRFP 225

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 96/237 (40%), Gaps = 38/237 (16%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK 155
           + RY     +G G FG      D+  KE+VA+K +         A I+  V +++  H  
Sbjct: 19  SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIE------RGAAIDENVQREIINHRS 72
Query: 156 GGN-RCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
             +   V+ +       H+ I+ E   G  LY+  R  N   F  D  R   +QLL  ++
Sbjct: 73  LRHPNIVRFKEVILTPTHLAIIMEYASGGELYE--RICNAGRFSEDEARFFFQQLLSGVS 130
Query: 214 FMHDLCMIHTDLKPENVLLVSSEY--IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           + H + + H DLK EN LL  S    +K+ D+  S      SS     PKS+        
Sbjct: 131 YCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYS-----KSSVLHSQPKST-------- 177
Query: 272 STTYERPDQNYIVSTRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHE 327
                       V T  Y APEV+L   +     D+WS G  L  +  G   F+  E
Sbjct: 178 ------------VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPE 222

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 98/236 (41%), Gaps = 36/236 (15%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK 155
           + RY++   +G G FG      D++  E+VA+K +   +K  E    EI +  +  +H  
Sbjct: 17  SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-INHRSLRHPN 75
Query: 156 GGNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                V+ +       H+ IV E   G  L++  R  N   F  D  R   +QL+  +++
Sbjct: 76  ----IVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSY 129
Query: 215 MHDLCMIHTDLKPENVLLVSSEY--IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
            H + + H DLK EN LL  S    +K+ D+  S      SS     PKS+         
Sbjct: 130 CHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYS-----KSSVLHSQPKST--------- 175
Query: 273 TTYERPDQNYIVSTRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHE 327
                      V T  Y APEV+L   +     D+WS G  L  +  G   F+  E
Sbjct: 176 -----------VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 220

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 94/234 (40%), Gaps = 32/234 (13%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK 155
           + RY++   +G G FG      D++  E+VA+K +   +K  E    EI +  +  +H  
Sbjct: 18  SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-INHRSLRHPN 76
Query: 156 GGNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                V+ +       H+ IV E   G  L++  R  N   F  D  R   +QL+  +++
Sbjct: 77  ----IVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSY 130
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H + + H DLK EN LL  S     P  K        SS     PKS+           
Sbjct: 131 CHAMQVCHRDLKLENTLLDGS---PAPRLKICAFGYSKSSVLHSQPKST----------- 176
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHE 327
                    V T  Y APEV+L   +     D+WS G  L  +  G   F+  E
Sbjct: 177 ---------VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 39/220 (17%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 160
           +G G+FG+V+     E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 103
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V++   F   +++ +V E   G  ++  LR+    S P    R  A Q++    ++H L 
Sbjct: 104 VKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLD 161
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +I+ DLKPEN+++    YI+V D+           + KR+           G T      
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDF----------GFAKRVK----------GRTWX---- 197
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
              +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 198 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 34/241 (14%)
Query: 100 KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 74
Query: 159 RCVQIRNWFDYRNHICIVFEKLGSS-LYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             VQ+         I IV E +    L DFL+    +   +  + ++A Q+   +A++  
Sbjct: 75  -LVQLYAVVS-EEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
           +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 180
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 336
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 181 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 337 R 337
           R
Sbjct: 230 R 230

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/335 (20%), Positives = 131/335 (39%), Gaps = 85/335 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           ++I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 157 GNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            N  +++  +F     + ++ E   LG+ +Y  L+K +   F          +L   +++
Sbjct: 71  PN-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQKLS--KFDEQRTATYITELANALSY 126
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN+LL S+  +K+ ++  S+H P                        
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR--------------------- 165
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 166 -----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 220
Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           + RV    P             +V  G  D                              
Sbjct: 221 ISRVEFTFPD------------FVTEGARD------------------------------ 238
Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  L+  LL+++P+ R   RE L HP+ T +
Sbjct: 239 -------LISRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+     E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 98
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E + G  ++  LR+     F     R  A Q++    +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEY 156
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTW 196
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 197 X-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 39/220 (17%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 160
           +G G+FG+V+     E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 103
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V++   F   +++ +V E + G  ++  LR+     F     R  A Q++    ++H L 
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSLD 161
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +I+ DLKPEN+L+    YI+V D+           + KR+           G T      
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTWX---- 197
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
              +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 198 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/335 (20%), Positives = 130/335 (38%), Gaps = 85/335 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           ++I   +G+G FG V    +++ K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 12  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 157 GNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            N  +++  +F     + ++ E   LG+ +Y  L+K     F          +L   +++
Sbjct: 70  PN-ILRLYGYFHDATRVYLILEYAPLGT-VYRELQK--LSKFDEQRTATYITELANALSY 125
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN+LL S+  +K+ ++  S+H P                        
Sbjct: 126 CHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR--------------------- 164
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 165 -----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 219
Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           + RV    P             +V  G  D                              
Sbjct: 220 ISRVEFTFPD------------FVTEGARD------------------------------ 237
Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  L+  LL+++P+ R   RE L HP+ T +
Sbjct: 238 -------LISRLLKHNPSQRPMLREVLEHPWITAN 265

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 41/286 (14%)
Query: 100 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 159
           K+  ++G G FG+V   +     + VA+K ++      +A + E  +++QL        R
Sbjct: 11  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQ-----R 64
Query: 160 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 218
            V++      +  I I+ E +   SL DFL+  +     I+ + ++A Q+ E +AF+ + 
Sbjct: 65  LVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 123
Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
             IH DL+  N+L+  +   K+ D+  +    +D+ Y  R      IK            
Sbjct: 124 NYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIK------------ 170
Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMER 337
                     + APE I    +T   D+WS G +L E+ T G   +    N E +  +ER
Sbjct: 171 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 220
Query: 338 VLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 380
                  + + R D   E+  +  RL W   PE   + + ++SV++
Sbjct: 221 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 260

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 39/220 (17%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 160
           +G G+FG+V+     E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 50  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 104
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V++   F   +++ +V E + G  ++  LR+     F     R  A Q++    ++H L 
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSLD 162
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +I+ DLKPEN+L+    YI+V D+           + KR+           G T      
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTWX---- 198
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
              +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 199 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHD 154
           +K    +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L    
Sbjct: 37  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 92
Query: 155 KGGNRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
              +    ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ 
Sbjct: 93  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVS 146
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++H   +IH DLKPEN+LL    +I++ D+ ++                   KV+  
Sbjct: 147 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL-- 185
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
            S   ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 186 -SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+    +E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 49  LGTGSFGRVMLVKHKESGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 98
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E + G  ++  LR+    S P    R  A Q++    +
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+L+    YI+V D+           + KR+           G T 
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDF----------GFAKRVK----------GRTW 196
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T    APE+IL  G+    D W++G ++ E+  G
Sbjct: 197 X-------LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 99/236 (41%), Gaps = 31/236 (13%)
Query: 87  YMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV 146
           +M       +  Y +  ++G+G F  V  C  +      A KI+   KK       ++E 
Sbjct: 19  FMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIIN-TKKLSARDFQKLER 77
Query: 147 LQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIA 205
             ++ +  +  N  V++ +     +   +VF+ + G  L++ +    + S   D    I 
Sbjct: 78  EARICRKLQHPN-IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYS-EADASHCI- 134
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 265
           +Q+LE IA+ H   ++H +LKPEN+LL S                          K +A+
Sbjct: 135 QQILESIAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAV 170
Query: 266 KVIDFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
           K+ DFG        + +     T  Y +PEV+    ++ P DIW+ G IL  L  G
Sbjct: 171 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHD 154
           +K    +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L    
Sbjct: 35  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 90
Query: 155 KGGNRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
              +    ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ 
Sbjct: 91  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVS 144
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++H   +IH DLKPEN+LL    +I++ D+ ++                   KV+  
Sbjct: 145 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL-- 183
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
            S   ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 184 -SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/300 (22%), Positives = 124/300 (41%), Gaps = 71/300 (23%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV-------RGIKKYREAAMIEIEVLQQLA 151
           Y I  ++G G   +V +  + E+K++ AIK V       + +  YR     EI  L +L 
Sbjct: 11  YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 65
Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
           +H    ++ +++ ++     +I +V E     L  +L+K   +S      +   + +LE 
Sbjct: 66  QH---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEA 120
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           +  +H   ++H+DLKP N L+V                               +K+IDFG
Sbjct: 121 VHTIHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFG 152
Query: 272 STTYERPDQNYI-----VSTRHYRAPEVILGLGWT-----------YPCDIWSVGCILVE 315
                +PD   +     V T +Y  PE I  +  +              D+WS+GCIL  
Sbjct: 153 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY 212
Query: 316 LCTGEALFQTHENLEHLAMMERVLGP--------LPQHMLKRVDRHAEKYVRRGRLDWPE 367
           +  G+  FQ  + +  ++ +  ++ P        +P+  L+ V +   K   + R+  PE
Sbjct: 213 MTYGKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 270

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 125/303 (41%), Gaps = 71/303 (23%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV-------RGIKKYREAAMIEIEVLQQLA 151
           Y I  ++G G   +V +  + E+K++ AIK V       + +  YR     EI  L +L 
Sbjct: 30  YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 84
Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
           +H    ++ +++ ++     +I +V E     L  +L+K   +S      +   + +LE 
Sbjct: 85  QH---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEA 139
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           +  +H   ++H+DLKP N L+V                               +K+IDFG
Sbjct: 140 VHTIHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFG 171
Query: 272 STTYERPDQNYI-----VSTRHYRAPEVILGLGWT-----------YPCDIWSVGCILVE 315
                +PD   +     V T +Y  PE I  +  +              D+WS+GCIL  
Sbjct: 172 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY 231
Query: 316 LCTGEALFQTHENLEHLAMMERVLGP--------LPQHMLKRVDRHAEKYVRRGRLDWPE 367
           +  G+  FQ  + +  ++ +  ++ P        +P+  L+ V +   K   + R+  PE
Sbjct: 232 MTYGKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 289
Query: 368 GAA 370
             A
Sbjct: 290 LLA 292

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHD 154
           +K    +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L    
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 89
Query: 155 KGGNRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
              +    ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ 
Sbjct: 90  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVS 143
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++H   +IH DLKPEN+LL    +I++ D+ ++                   KV+  
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL-- 182
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
            S   ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 183 -SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 131/309 (42%), Gaps = 50/309 (16%)
Query: 77  PWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY 136
           PW ED+          E      K+  ++G G FG+V   +     + VA+K ++     
Sbjct: 8   PWWEDE---------WEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMS 57
Query: 137 REAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRS 195
            +A + E  +++QL        R V++      +  I I+ E +   SL DFL+  +   
Sbjct: 58  PDAFLAEANLMKQLQHQ-----RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIK 111
Query: 196 FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 255
             I+ + ++A Q+ E +AF+ +   IH DL+  N+L+  +   K+ D+  +    +D+ Y
Sbjct: 112 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEY 170
Query: 256 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE 315
             R      IK                      + APE I    +T   D+WS G +L E
Sbjct: 171 TAREGAKFPIK----------------------WTAPEAINYGTFTIKSDVWSFGILLTE 208
Query: 316 LCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAAS 371
           + T G   +    N E +  +ER       + + R D   E+  +  RL W   PE   +
Sbjct: 209 IVTHGRIPYPGMTNPEVIQNLER------GYRMVRPDNCPEELYQLMRLCWKERPEDRPT 262
Query: 372 RESIKSVMK 380
            + ++SV++
Sbjct: 263 FDYLRSVLE 271

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHD 154
           +K    +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L    
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 89
Query: 155 KGGNRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
              +    ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ 
Sbjct: 90  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVS 143
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++H   +IH DLKPEN+LL    +I++ D+ ++                   KV+  
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL-- 182
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
            S   ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 183 -SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 95/225 (42%), Gaps = 49/225 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G G+FG+V+     E     A+KI   + K +   + +IE       H     R +Q  
Sbjct: 50  LGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKQIE-------HTLNEKRILQAV 99
Query: 165 NW---------FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           N+         F   +++ +V E   G  ++  LR+     F     R  A Q++    +
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEY 157
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H L +I+ DLKPEN+++    YIKV D+           + KR+           G T 
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDF----------GFAKRVK----------GRTW 197
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                   +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 198 X-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 131/309 (42%), Gaps = 50/309 (16%)
Query: 77  PWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY 136
           PW ED+          E      K+  ++G G FG+V   +     + VA+K ++     
Sbjct: 7   PWWEDE---------WEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMS 56
Query: 137 REAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRS 195
            +A + E  +++QL        R V++      +  I I+ E +   SL DFL+  +   
Sbjct: 57  PDAFLAEANLMKQLQHQ-----RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIK 110
Query: 196 FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 255
             I+ + ++A Q+ E +AF+ +   IH DL+  N+L+  +   K+ D+  +    +D+ Y
Sbjct: 111 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEY 169
Query: 256 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE 315
             R      IK                      + APE I    +T   D+WS G +L E
Sbjct: 170 TAREGAKFPIK----------------------WTAPEAINYGTFTIKSDVWSFGILLTE 207
Query: 316 LCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAAS 371
           + T G   +    N E +  +ER       + + R D   E+  +  RL W   PE   +
Sbjct: 208 IVTHGRIPYPGMTNPEVIQNLER------GYRMVRPDNCPEELYQLMRLCWKERPEDRPT 261
Query: 372 RESIKSVMK 380
            + ++SV++
Sbjct: 262 FDYLRSVLE 270

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHD 154
           +K    +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L    
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 89
Query: 155 KGGNRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
              +    ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ 
Sbjct: 90  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVS 143
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++H   +IH DLKPEN+LL    +I++ D+ ++                   KV+  
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL-- 182
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
            S   ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 183 -SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHD 154
           +K    +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L    
Sbjct: 35  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 90
Query: 155 KGGNRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
              +    ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ 
Sbjct: 91  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVS 144
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++H   +IH DLKPEN+LL    +I++ D+ ++                   KV+  
Sbjct: 145 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL-- 183
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
            S   ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 184 -SPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 39/220 (17%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRC 160
           +G G+FG+V+     E     A+KI+   K    K  E  + E  +LQ +          
Sbjct: 49  LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFL 103
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V++   F   +++ +V E   G  ++  LR+     F     R  A Q++    ++H L 
Sbjct: 104 VKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSLD 161
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +I+ DLKPEN+++    YIKV D+           + KR+           G T      
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDF----------GFAKRVK----------GRTWX---- 197
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
              +  T  Y APE+IL  G+    D W++G ++ E+  G
Sbjct: 198 ---LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 125/303 (41%), Gaps = 71/303 (23%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV-------RGIKKYREAAMIEIEVLQQLA 151
           Y I  ++G G   +V +  + E+K++ AIK V       + +  YR     EI  L +L 
Sbjct: 14  YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 68
Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
           +H    ++ +++ ++     +I +V E     L  +L+K   +S      +   + +LE 
Sbjct: 69  QH---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEA 123
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           +  +H   ++H+DLKP N L+V                               +K+IDFG
Sbjct: 124 VHTIHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFG 155
Query: 272 STTYERPDQNYI-----VSTRHYRAPEVILGLGWT-----------YPCDIWSVGCILVE 315
                +PD   +     V T +Y  PE I  +  +              D+WS+GCIL  
Sbjct: 156 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY 215
Query: 316 LCTGEALFQTHENLEHLAMMERVLGP--------LPQHMLKRVDRHAEKYVRRGRLDWPE 367
           +  G+  FQ  + +  ++ +  ++ P        +P+  L+ V +   K   + R+  PE
Sbjct: 216 MTYGKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 273
Query: 368 GAA 370
             A
Sbjct: 274 LLA 276

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHD 154
           +K    +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L    
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 87
Query: 155 KGGNRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
              +    ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ 
Sbjct: 88  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVS 141
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++H   +IH DLKPEN+LL    +I++ D+ ++                   KV+  
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL-- 180
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
            S   ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 181 -SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 131/309 (42%), Gaps = 50/309 (16%)
Query: 77  PWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY 136
           PW ED+          E      K+  ++G G FG+V   +     + VA+K ++     
Sbjct: 2   PWWEDE---------WEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMS 51
Query: 137 REAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRS 195
            +A + E  +++QL        R V++      +  I I+ E +   SL DFL+  +   
Sbjct: 52  PDAFLAEANLMKQLQHQ-----RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIK 105
Query: 196 FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 255
             I+ + ++A Q+ E +AF+ +   IH DL+  N+L+  +   K+ D+  +    +D+ Y
Sbjct: 106 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEY 164
Query: 256 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE 315
             R      IK                      + APE I    +T   D+WS G +L E
Sbjct: 165 TAREGAKFPIK----------------------WTAPEAINYGTFTIKSDVWSFGILLTE 202
Query: 316 LCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAAS 371
           + T G   +    N E +  +ER       + + R D   E+  +  RL W   PE   +
Sbjct: 203 IVTHGRIPYPGMTNPEVIQNLER------GYRMVRPDNCPEELYQLMRLCWKERPEDRPT 256
Query: 372 RESIKSVMK 380
            + ++SV++
Sbjct: 257 FDYLRSVLE 265

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 125/303 (41%), Gaps = 71/303 (23%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV-------RGIKKYREAAMIEIEVLQQLA 151
           Y I  ++G G   +V +  + E+K++ AIK V       + +  YR     EI  L +L 
Sbjct: 10  YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 64
Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
           +H    ++ +++ ++     +I +V E     L  +L+K   +S      +   + +LE 
Sbjct: 65  QH---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEA 119
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           +  +H   ++H+DLKP N L+V                               +K+IDFG
Sbjct: 120 VHTIHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFG 151
Query: 272 STTYERPDQNYI-----VSTRHYRAPEVILGLGWT-----------YPCDIWSVGCILVE 315
                +PD   +     V T +Y  PE I  +  +              D+WS+GCIL  
Sbjct: 152 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY 211
Query: 316 LCTGEALFQTHENLEHLAMMERVLGP--------LPQHMLKRVDRHAEKYVRRGRLDWPE 367
           +  G+  FQ  + +  ++ +  ++ P        +P+  L+ V +   K   + R+  PE
Sbjct: 212 MTYGKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 269
Query: 368 GAA 370
             A
Sbjct: 270 LLA 272

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHD 154
           +K    +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L    
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 87
Query: 155 KGGNRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
              +    ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ 
Sbjct: 88  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVS 141
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++H   +IH DLKPEN+LL    +I++ D+ ++                   KV+  
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL-- 180
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
            S   ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 181 -SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 125/303 (41%), Gaps = 71/303 (23%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV-------RGIKKYREAAMIEIEVLQQLA 151
           Y I  ++G G   +V +  + E+K++ AIK V       + +  YR     EI  L +L 
Sbjct: 30  YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 84
Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
           +H    ++ +++ ++     +I +V E     L  +L+K   +S      +   + +LE 
Sbjct: 85  QH---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEA 139
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           +  +H   ++H+DLKP N L+V                               +K+IDFG
Sbjct: 140 VHTIHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFG 171
Query: 272 STTYERPDQNYI-----VSTRHYRAPEVILGLGWT-----------YPCDIWSVGCILVE 315
                +PD   +     V T +Y  PE I  +  +              D+WS+GCIL  
Sbjct: 172 IANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY 231
Query: 316 LCTGEALFQTHENLEHLAMMERVLGP--------LPQHMLKRVDRHAEKYVRRGRLDWPE 367
           +  G+  FQ  + +  ++ +  ++ P        +P+  L+ V +   K   + R+  PE
Sbjct: 232 MTYGKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 289
Query: 368 GAA 370
             A
Sbjct: 290 LLA 292

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 70/335 (20%), Positives = 131/335 (39%), Gaps = 85/335 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ--LAKHDKG 156
           ++I   +G+G FG V    ++  K ++A+K++   K   E A +E ++ ++  +  H + 
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKNSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 157 GNRCVQIRNWF--DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            N  +++  +F    R ++ + +  LG+ +Y  L+K +   F          +L   +++
Sbjct: 68  PN-ILRLYGYFHDSTRVYLILEYAPLGT-VYRELQKLS--KFDEQRTATYITELANALSY 123
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   +IH D+KPEN+LL S+  +K+ D+  S+H P                        
Sbjct: 124 CHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--------------------- 162
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                +  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   +    
Sbjct: 163 -----RAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKR 217
Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           + RV    P             +V  G  D                              
Sbjct: 218 ISRVEFTFPD------------FVTEGARD------------------------------ 235
Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  L+  LL+++P+ R   RE L HP+ T +
Sbjct: 236 -------LISRLLKHNPSQRPMLREVLEHPWITAN 263

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHD 154
           +K    +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L    
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 89
Query: 155 KGGNRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
              +    ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ 
Sbjct: 90  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVS 143
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++H   +IH DLKPEN+LL    +I++ D+ ++                   KV+  
Sbjct: 144 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL-- 182
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
            S   ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 183 -SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHD 154
           +K    +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L    
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 87
Query: 155 KGGNRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
              +    ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ 
Sbjct: 88  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVS 141
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++H   +IH DLKPEN+LL    +I++ D+ ++                   KV+  
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL-- 180
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
            S   ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 181 -SPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 34/241 (14%)
Query: 100 KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 74
Query: 159 RCVQIRNWFDYRNHICIVFEKLGSS-LYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             VQ+         I IV E +    L DFL+    +   +  + ++A Q+   +A++  
Sbjct: 75  -LVQLYAVVS-EEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
           +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK           
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEYTARQGAKFPIK----------- 180
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 336
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 181 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 337 R 337
           R
Sbjct: 230 R 230

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 100 KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 18  RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 71
Query: 159 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             VQ+         I IV E +   SL DFL+    +   +  + +++ Q+   +A++  
Sbjct: 72  -LVQLYAVVS-EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER 129
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
           +  +H DL+  N+L+  +   KV D+  +    +D+ +  R      IK           
Sbjct: 130 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEWTARQGAKFPIK----------- 177
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 336
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 178 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 226
Query: 337 R 337
           R
Sbjct: 227 R 227

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 34/241 (14%)
Query: 100 KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 11  RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 64
Query: 159 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 65  -LVQLYAVVS-EEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 122
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
           +  +H DL+  N+L+  +   KV D+  +    +D+    R      IK           
Sbjct: 123 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEXTARQGAKFPIK----------- 170
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 336
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 171 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 219
Query: 337 R 337
           R
Sbjct: 220 R 220

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/300 (22%), Positives = 123/300 (41%), Gaps = 71/300 (23%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV-------RGIKKYREAAMIEIEVLQQLA 151
           Y I  ++G G   +V +  + E+K++ AIK V       + +  YR     EI  L +L 
Sbjct: 58  YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 112
Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
           +H    ++ +++ ++     +I +V E     L  +L+K   +S      +   + +LE 
Sbjct: 113 QH---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEA 167
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           +  +H   ++H+DLKP N L+V                               +K+IDFG
Sbjct: 168 VHTIHQHGIVHSDLKPANFLIV----------------------------DGMLKLIDFG 199
Query: 272 STTYERPDQNYIVSTR-----HYRAPEVILGLGWT-----------YPCDIWSVGCILVE 315
                +PD   +V        +Y  PE I  +  +              D+WS+GCIL  
Sbjct: 200 IANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY 259
Query: 316 LCTGEALFQTHENLEHLAMMERVLGP--------LPQHMLKRVDRHAEKYVRRGRLDWPE 367
           +  G+  FQ  + +  ++ +  ++ P        +P+  L+ V +   K   + R+  PE
Sbjct: 260 MTYGKTPFQ--QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 317

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 34/241 (14%)
Query: 100 KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++  K+G+G FG+V +  W+   +  VAIK ++      EA + E +V+++L +H+K   
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK--- 74
Query: 159 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             VQ+         I IV E +   SL DFL+    +   +  + ++A Q+   +A++  
Sbjct: 75  -LVQLYAVVS-EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
           +  +H DL+  N+L+  +   KV D+  +    +D+    R      IK           
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEXTARQGAKFPIK----------- 180
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMME 336
                      + APE  L   +T   D+WS G +L EL T G   +    N E L  +E
Sbjct: 181 -----------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 337 R 337
           R
Sbjct: 230 R 230

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHD 154
           +K    +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L    
Sbjct: 11  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 66
Query: 155 KGGNRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
              +    ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ 
Sbjct: 67  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVS 120
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++H   +IH DLKPEN+LL    +I++ D+ ++                   KV+  
Sbjct: 121 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL-- 159
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
            S   ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 160 -SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHD 154
           +K    +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L    
Sbjct: 12  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 67
Query: 155 KGGNRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
              +    ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ 
Sbjct: 68  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVS 121
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++H   +IH DLKPEN+LL    +I++ D+ ++                   KV+  
Sbjct: 122 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL-- 160
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
            S   ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 161 -SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHD 154
           +K    +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L    
Sbjct: 10  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 65
Query: 155 KGGNRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
              +    ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ 
Sbjct: 66  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVS 119
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++H   +IH DLKPEN+LL    +I++ D+ ++                   KV+  
Sbjct: 120 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL-- 158
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
            S   ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 159 -SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHD 154
           +K    +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L    
Sbjct: 9   FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 64
Query: 155 KGGNRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
              +    ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ 
Sbjct: 65  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVS 118
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++H   +IH DLKPEN+LL    +I++ D+ ++                   KV+  
Sbjct: 119 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL-- 157
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
            S   ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 158 -SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 103/245 (42%), Gaps = 46/245 (18%)
Query: 83  KDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAA 140
           K GHY+  LG+ L          G GTFG+V           VA+KI+  + I+      
Sbjct: 14  KIGHYI--LGDTL----------GVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVG 61
Query: 141 MIEIEVLQ-QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPI 198
            I  E+   +L +H       +++       + I +V E + G  L+D++ KN       
Sbjct: 62  KIRREIQNLKLFRHP----HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNG--RLDE 115
Query: 199 DLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKR 258
              R + +Q+L  + + H   ++H DLKPENVLL +    K+ D+  S +   D  + + 
Sbjct: 116 KESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS-NMMSDGEFLRX 174
Query: 259 MPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                       GS  Y  P+   ++S R Y  PEV          DIWS G IL  L  
Sbjct: 175 ----------SCGSPNYAAPE---VISGRLYAGPEV----------DIWSSGVILYALLC 211
Query: 319 GEALF 323
           G   F
Sbjct: 212 GTLPF 216

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHD 154
           +K    +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L    
Sbjct: 16  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 71
Query: 155 KGGNRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
              +    ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ 
Sbjct: 72  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVS 125
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++H   +IH DLKPEN+LL    +I++ D+ ++                   KV+  
Sbjct: 126 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL-- 164
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
            S   ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 165 -SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 125/286 (43%), Gaps = 41/286 (14%)
Query: 100 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 159
           K+  ++G G FG+V   +     + VA+K ++      +A + E  +++QL        R
Sbjct: 12  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQ-----R 65
Query: 160 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 218
            V++      +  I I+ E +   SL DFL+  +     I+ + ++A Q+ E +AF+ + 
Sbjct: 66  LVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 124
Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
             IH +L+  N+L+  +   K+ D+  +    +D+ Y  R      IK            
Sbjct: 125 NYIHRNLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIK------------ 171
Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMER 337
                     + APE I    +T   D+WS G +L E+ T G   +    N E +  +ER
Sbjct: 172 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 221
Query: 338 VLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 380
                  + + R D   E+  +  RL W   PE   + + ++SV++
Sbjct: 222 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 261

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 93/234 (39%), Gaps = 32/234 (13%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK 155
           + RY++   +G G FG      D++  E+VA+K +   +K  E    EI +  +  +H  
Sbjct: 18  SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-INHRSLRHPN 76
Query: 156 GGNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                V+ +       H+ IV E   G  L++  R  N   F  D  R   +QL+  +++
Sbjct: 77  ----IVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSY 130
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H + + H DLK EN LL  S     P  K        SS     PK +           
Sbjct: 131 CHAMQVCHRDLKLENTLLDGS---PAPRLKICAFGYSKSSVLHSQPKDT----------- 176
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHE 327
                    V T  Y APEV+L   +     D+WS G  L  +  G   F+  E
Sbjct: 177 ---------VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHD 154
           +K    +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L    
Sbjct: 31  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 86
Query: 155 KGGNRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
              +    ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ 
Sbjct: 87  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVS 140
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++H   +IH DLKPEN+LL    +I++ D+ ++                   KV+  
Sbjct: 141 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL-- 179
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
            S   ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 180 -SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 101/229 (44%), Gaps = 40/229 (17%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHD 154
           +K    +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L    
Sbjct: 39  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 94
Query: 155 KGGNRCVQIRNWF----DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
              +    ++ +F    D + +  + + K G  L  ++RK    SF     R    +++ 
Sbjct: 95  ---DHPFFVKLYFCFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVS 148
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++H   +IH DLKPEN+LL    +I++ D+ ++                   KV+  
Sbjct: 149 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL-- 187
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
            S   ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 188 -SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 34/229 (14%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEVLQ-QLAKHDK 155
           Y +   +G GTFG+V     +     VA+KI+  + I+       I+ E+   +L +H  
Sbjct: 13  YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP- 71
Query: 156 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                +++           +V E + G  L+D++ K+  R   ++  R + +Q+L  + +
Sbjct: 72  ---HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG-RVEEME-ARRLFQQILSAVDY 126
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   ++H DLKPENVLL +    K+ D+  S +   D  + +             GS  
Sbjct: 127 CHRHMVVHRDLKPENVLLDAHMNAKIADFGLS-NMMSDGEFLR----------TSCGSPN 175
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 323
           Y  P+   ++S R Y  PEV          DIWS G IL  L  G   F
Sbjct: 176 YAAPE---VISGRLYAGPEV----------DIWSCGVILYALLCGTLPF 211

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 40/229 (17%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHD 154
           +K    +GEG+F  V+   +       AIKI+  R I K  +   +  E +V+ +L    
Sbjct: 31  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 86
Query: 155 KGGNRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
              +    ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ 
Sbjct: 87  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVS 140
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++H   +IH DLKPEN+LL    +I++ D+ ++                   KV+  
Sbjct: 141 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL-- 179
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
            S   ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 180 -SPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 35/231 (15%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAA--MIEIEVLQQLAKHDKGGNRC 160
           +G+G+FG+VL    +  +   A+K++  + I K +E    M E  VL +  KH       
Sbjct: 46  IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP----FL 101
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V +   F   + +  V + + G  L+  L++   R F     R  A ++   + ++H L 
Sbjct: 102 VGLHFSFQTADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLN 159
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +++ DLKPEN+LL S  +I + D+                      + I+  STT     
Sbjct: 160 IVYRDLKPENILLDSQGHIVLTDF------------------GLCKENIEHNSTT----- 196
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
            +    T  Y APEV+    +    D W +G +L E+  G   F +    E
Sbjct: 197 -STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE 246

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/233 (22%), Positives = 98/233 (42%), Gaps = 30/233 (12%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           + I   +G+G FG V    +++ K ++A+K++   +  +E    ++    ++  H +  N
Sbjct: 17  FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 76
Query: 159 RCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             +++ N+F  R  I ++ E      LY  L+K+    F          +L + + + H+
Sbjct: 77  -ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHE 133
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
             +IH D+KPEN+L+     +K+ D+  S+H P   S  +R                   
Sbjct: 134 RKVIHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRX------------------ 172
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                +  T  Y  PE+I G       D+W  G +  E   G   F +  + E
Sbjct: 173 -----MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 220

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 101/236 (42%), Gaps = 34/236 (14%)
Query: 92  GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEVLQ- 148
           G      Y +   +G GTFG+V     +     VA+KI+  + I+       I+ E+   
Sbjct: 6   GRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNL 65
Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 207
           +L +H       +++           +V E + G  L+D++ K+  R   ++  R + +Q
Sbjct: 66  KLFRHP----HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG-RVEEME-ARRLFQQ 119
Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           +L  + + H   ++H DLKPENVLL +    K+ D+  S +   D  + +          
Sbjct: 120 ILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS-NMMSDGEFLRD--------- 169
Query: 268 IDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 323
              GS  Y  P+   ++S R Y  PEV          DIWS G IL  L  G   F
Sbjct: 170 -SCGSPNYAAPE---VISGRLYAGPEV----------DIWSCGVILYALLCGTLPF 211

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 101/229 (44%), Gaps = 40/229 (17%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHD 154
           +K    +GEG+F   +   +       AIKI+  R I K  +   +  E +V+ +L    
Sbjct: 32  FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 87
Query: 155 KGGNRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
              +    ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ 
Sbjct: 88  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGE-LLKYIRKIG--SFDETCTRFYTAEIVS 141
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++H   +IH DLKPEN+LL    +I++ D+ ++                   KV+  
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTA-------------------KVL-- 180
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
            S   ++   N  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 181 -SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 151/378 (39%), Gaps = 62/378 (16%)
Query: 83  KDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRER---KEMVAIK-IVRGIKKYRE 138
           KD   ++     L++ +KI  K+GEGTF  V     + +   +E +A+K ++      R 
Sbjct: 7   KDIEKLYEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRI 66
Query: 139 AAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFP 197
           AA  E++ L        G +  + ++  F   +H+ I    L   S  D L   +++   
Sbjct: 67  AA--ELQCLTVAG----GQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQE-- 118
Query: 198 IDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVS--SEYIKVPDYKSSLHTPKDSSY 255
              VRE    L + +  +H   ++H D+KP N L      +Y  V D+  +  T      
Sbjct: 119 ---VREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALV-DFGLAQGTHDTKIE 174
Query: 256 FKRMPKSSAIKVIDFGSTTYERPDQNYI-------------VSTRHYRAPEVILGL-GWT 301
             +  +S A +         ER  QN                 T  +RAPEV+      T
Sbjct: 175 LLKFVQSEAQQ---------ERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQT 225
Query: 302 YPCDIWSVGCILVELCTGE-ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
              D+WS G I + L +G    ++  ++L  LA +  + G        R    A K   +
Sbjct: 226 TAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRG-------SRETIQAAKTFGK 278
Query: 361 GRLDWPEGAASR-----ESIKSV-MKLPRLQNLIMQHVDHSAG------DLTHLLQGLLR 408
             L   E  A       E ++ +    P+L + I  H  +  G      +   LL  LL 
Sbjct: 279 SILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLD 338
Query: 409 YDPTDRLTAREALRHPFF 426
            +P  R+TA EAL HPFF
Sbjct: 339 LNPASRITAEEALLHPFF 356

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 97/228 (42%), Gaps = 35/228 (15%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           +G+G FGQV++  +       AIK +R  ++     + E+ +L  L       N    +R
Sbjct: 14  LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASL-------NHQYVVR 66
Query: 165 ---NWFDYRNHI---------CIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQL 208
               W + RN +           +F +       +LYD +   N      +  R + RQ+
Sbjct: 67  YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWR-LFRQI 125
Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
           LE ++++H   +IH +LKP N+ +  S  +K+ D+  +          K + +S  I  +
Sbjct: 126 LEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLA----------KNVHRSLDILKL 175
Query: 269 DFGSTTYERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVE 315
           D  +      +    + T  Y A EV+ G G +    D +S+G I  E
Sbjct: 176 DSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 34/221 (15%)
Query: 105 MGEGTFGQV-LECWDRERK---EMVAIKIVRGI--KKYREAAMIEIEVLQQLA-KHDKGG 157
           +GEG FG+V L C+D       EMVA+K ++     ++R     EI++L+ L  +H    
Sbjct: 22  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 158 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             C + +   +    + + +  LGS L D+L ++   S  +  +   A+Q+ E +A++H 
Sbjct: 82  KGCCEDQG--EKSLQLVMEYVPLGS-LRDYLPRH---SIGLAQLLLFAQQICEGMAYLHS 135
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
              IH +L   NVLL +   +K+ D+  +   P+   Y++                   R
Sbjct: 136 QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV------------------R 177
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
            D +   S   + APE +    + Y  D+WS G  L EL T
Sbjct: 178 EDGD---SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 36/245 (14%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVL 147
           E L S+Y++   +G G FG V           VAIK V    I  + E      + +EV+
Sbjct: 4   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIA 205
             L K   G +  +++ +WF+  +   ++ E++     L+DF+ +    +   +L R   
Sbjct: 64  L-LKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERG--ALQEELARSFF 120
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            Q+LE +   H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y         
Sbjct: 121 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--------- 170
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
               DF  T    P +       H R+  V            WS+G +L ++  G+  F+
Sbjct: 171 ---TDFDGTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFE 215
Query: 325 THENL 329
             E +
Sbjct: 216 HDEEI 220

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/233 (22%), Positives = 98/233 (42%), Gaps = 30/233 (12%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           + I   +G+G FG V    +++ K ++A+K++   +  +E    ++    ++  H +  N
Sbjct: 16  FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 159 RCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             +++ N+F  R  I ++ E      LY  L+K+    F          +L + + + H+
Sbjct: 76  -ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHE 132
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
             +IH D+KPEN+L+     +K+ D+  S+H P   S  +R                   
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRX------------------ 171
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                +  T  Y  PE+I G       D+W  G +  E   G   F +  + E
Sbjct: 172 -----MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 219

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/309 (23%), Positives = 130/309 (42%), Gaps = 50/309 (16%)
Query: 77  PWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY 136
           PW ED+          E      K+  ++G G FG+V   +     + VA+K ++     
Sbjct: 11  PWWEDE---------WEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMS 60
Query: 137 REAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRS 195
            +A + E  +++QL        R V++      +  I I+ E +   SL DFL+  +   
Sbjct: 61  PDAFLAEANLMKQLQHQ-----RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIK 114
Query: 196 FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 255
             I+ + ++A Q+ E +AF+ +   IH DL+  N+L+  +   K+ D+  +    +D+  
Sbjct: 115 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEX 173
Query: 256 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE 315
             R      IK                      + APE I    +T   D+WS G +L E
Sbjct: 174 TAREGAKFPIK----------------------WTAPEAINYGTFTIKSDVWSFGILLTE 211
Query: 316 LCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAAS 371
           + T G   +    N E +  +ER       + + R D   E+  +  RL W   PE   +
Sbjct: 212 IVTHGRIPYPGMTNPEVIQNLER------GYRMVRPDNCPEELYQLMRLCWKERPEDRPT 265
Query: 372 RESIKSVMK 380
            + ++SV++
Sbjct: 266 FDYLRSVLE 274

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 124/286 (43%), Gaps = 41/286 (14%)
Query: 100 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 159
           K+  ++G G FG+V   +     + VA+K ++      +A + E  +++QL        R
Sbjct: 24  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQ-----R 77
Query: 160 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 218
            V++      +  I I+ E +   SL DFL+  +     I+ + ++A Q+ E +AF+ + 
Sbjct: 78  LVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 136
Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
             IH DL+  N+L+  +   K+ D+  +    +D+    R      IK            
Sbjct: 137 NYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKFPIK------------ 183
Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMER 337
                     + APE I    +T   D+WS G +L E+ T G   +    N E +  +ER
Sbjct: 184 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 233
Query: 338 VLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 380
                  + + R D   E+  +  RL W   PE   + + ++SV++
Sbjct: 234 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 273

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/309 (23%), Positives = 130/309 (42%), Gaps = 50/309 (16%)
Query: 77  PWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY 136
           PW ED+          E      K+  ++G G FG+V   +     + VA+K ++     
Sbjct: 2   PWWEDE---------WEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMS 51
Query: 137 REAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRS 195
            +A + E  +++QL        R V++      +  I I+ E +   SL DFL+  +   
Sbjct: 52  PDAFLAEANLMKQLQHQ-----RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIK 105
Query: 196 FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 255
             I+ + ++A Q+ E +AF+ +   IH DL+  N+L+  +   K+ D+  +    +D+  
Sbjct: 106 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEX 164
Query: 256 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE 315
             R      IK                      + APE I    +T   D+WS G +L E
Sbjct: 165 TAREGAKFPIK----------------------WTAPEAINYGTFTIKSDVWSFGILLTE 202
Query: 316 LCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAAS 371
           + T G   +    N E +  +ER       + + R D   E+  +  RL W   PE   +
Sbjct: 203 IVTHGRIPYPGMTNPEVIQNLER------GYRMVRPDNCPEELYQLMRLCWKERPEDRPT 256
Query: 372 RESIKSVMK 380
            + ++SV++
Sbjct: 257 FDYLRSVLE 265

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 34/221 (15%)
Query: 105 MGEGTFGQV-LECWDRERK---EMVAIKIVRGI--KKYREAAMIEIEVLQQLA-KHDKGG 157
           +GEG FG+V L C+D       EMVA+K ++     ++R     EI++L+ L  +H    
Sbjct: 22  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 158 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             C + +   +    + + +  LGS L D+L ++   S  +  +   A+Q+ E +A++H 
Sbjct: 82  KGCCEDQG--EKSLQLVMEYVPLGS-LRDYLPRH---SIGLAQLLLFAQQICEGMAYLHA 135
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
              IH +L   NVLL +   +K+ D+  +   P+   Y++                   R
Sbjct: 136 QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV------------------R 177
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
            D +   S   + APE +    + Y  D+WS G  L EL T
Sbjct: 178 EDGD---SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 41/221 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR----EAAMIEIEVLQQLAKHDKGGNR 159
           ++G G+FG V    D    E+VAIK +    K      +  + E+  LQ+L +H      
Sbjct: 61  EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPN---- 115
Query: 160 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
            +Q R  +   +   +V E    S  D L  +      +++   +    L+ +A++H   
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-AVTHGALQGLAYLHSHN 174
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           MIH D+K  N+LL                            +   +K+ DFGS +   P 
Sbjct: 175 MIHRDVKAGNILL---------------------------SEPGLVKLGDFGSASIMAP- 206
Query: 280 QNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELC 317
            N  V T ++ APEVIL +    +    D+WS+G   +EL 
Sbjct: 207 ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 247

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 31/228 (13%)
Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD 154
            +  Y +  ++G+G F  V  C  +      A KI+   KK       ++E   ++ +  
Sbjct: 4   FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKII-NTKKLSARDFQKLEREARICRKL 62
Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
           +  N  V++ +     +   +VF+ + G  L++ +    + S   D    I +Q+LE IA
Sbjct: 63  QHPN-IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYS-EADASHCI-QQILESIA 119
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           + H   ++H +LKPEN+LL S                          K +A+K+ DFG  
Sbjct: 120 YCHSNGIVHRNLKPENLLLASK------------------------AKGAAVKLADFGLA 155
Query: 274 TYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                 + +     T  Y +PEV+    ++ P DIW+ G IL  L  G
Sbjct: 156 IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 41/243 (16%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI----EIEVLQQLAKHD 154
           ++I   +G G FG+V     +  + + A+KI+   +  + A       E +VL       
Sbjct: 76  FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN----- 130
Query: 155 KGGNRCVQIRNW-FDYRNHICIVFEK-LGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
            G  + +   ++ F   NH+ +V +  +G  L   L K   +  P D+ R    +++  I
Sbjct: 131 -GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAI 188
Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
             +H L  +H D+KP+NVLL  + +I++ D+ S L    D +      +SS         
Sbjct: 189 DSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTV-----QSSV-------- 235
Query: 273 TTYERPDQNYIVSTRHYRAPEVIL----GLGWTYP-CDIWSVGCILVELCTGEALFQTHE 327
                      V T  Y +PE++     G+G   P CD WS+G  + E+  GE  F    
Sbjct: 236 ----------AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES 285
Query: 328 NLE 330
            +E
Sbjct: 286 LVE 288

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 41/243 (16%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI----EIEVLQQLAKHD 154
           ++I   +G G FG+V     +  + + A+KI+   +  + A       E +VL       
Sbjct: 92  FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN----- 146
Query: 155 KGGNRCVQIRNW-FDYRNHICIVFEK-LGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
            G  + +   ++ F   NH+ +V +  +G  L   L K   +  P D+ R    +++  I
Sbjct: 147 -GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAI 204
Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
             +H L  +H D+KP+NVLL  + +I++ D+ S L    D +      +SS         
Sbjct: 205 DSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTV-----QSSV-------- 251
Query: 273 TTYERPDQNYIVSTRHYRAPEVIL----GLGWTYP-CDIWSVGCILVELCTGEALFQTHE 327
                      V T  Y +PE++     G+G   P CD WS+G  + E+  GE  F    
Sbjct: 252 ----------AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES 301
Query: 328 NLE 330
            +E
Sbjct: 302 LVE 304

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 90/225 (40%), Gaps = 46/225 (20%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           ++G G+FG+V    D++     A+K VR ++ +R   ++    L           R V +
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKVR-LEVFRAEELMACAGLTS--------PRIVPL 150
Query: 164 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
                    + I  E L G SL   +++      P D       Q LE + ++H   ++H
Sbjct: 151 YGAVREGPWVNIFMELLEGGSLGQLVKEQG--CLPEDRALYYLGQALEGLEYLHSRRILH 208
Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-- 280
            D+K +NVLL S                 D S+           + DFG     +PD   
Sbjct: 209 GDVKADNVLLSS-----------------DGSH---------AALCDFGHAVCLQPDGLG 242
Query: 281 ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                 +YI  T  + APEV+LG       D+WS  C+++ +  G
Sbjct: 243 KSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 31/228 (13%)
Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD 154
            +  Y +  ++G+G F  V  C  +      A KI+   KK       ++E   ++ +  
Sbjct: 3   FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKII-NTKKLSARDFQKLEREARICRKL 61
Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
           +  N  V++ +     +   +VF+ + G  L++ +    + S   D    I +Q+LE IA
Sbjct: 62  QHPN-IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYS-EADASHCI-QQILESIA 118
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           + H   ++H +LKPEN+LL S                          K +A+K+ DFG  
Sbjct: 119 YCHSNGIVHRNLKPENLLLASK------------------------AKGAAVKLADFGLA 154
Query: 274 TYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                 + +     T  Y +PEV+    ++ P DIW+ G IL  L  G
Sbjct: 155 IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/309 (23%), Positives = 130/309 (42%), Gaps = 50/309 (16%)
Query: 77  PWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY 136
           PW ED+          E      K+  ++G G FG+V   +     + VA+K ++     
Sbjct: 8   PWWEDE---------WEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMS 57
Query: 137 REAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRS 195
            +A + E  +++QL        R V++      +  I I+ E +   SL DFL+  +   
Sbjct: 58  PDAFLAEANLMKQLQHQ-----RLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIK 111
Query: 196 FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 255
             I+ + ++A Q+ E +AF+ +   IH DL+  N+L+  +   K+ D+  +    +D+  
Sbjct: 112 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEX 170
Query: 256 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE 315
             R      IK                      + APE I    +T   D+WS G +L E
Sbjct: 171 TAREGAKFPIK----------------------WTAPEAINYGTFTIKSDVWSFGILLTE 208
Query: 316 LCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAAS 371
           + T G   +    N E +  +ER       + + R D   E+  +  RL W   PE   +
Sbjct: 209 IVTHGRIPYPGMTNPEVIQNLER------GYRMVRPDNCPEELYQLMRLCWKERPEDRPT 262
Query: 372 RESIKSVMK 380
            + ++SV++
Sbjct: 263 FDYLRSVLE 271

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/309 (23%), Positives = 130/309 (42%), Gaps = 50/309 (16%)
Query: 77  PWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY 136
           PW ED+          E      K+  ++G G FG+V   +     + VA+K ++     
Sbjct: 4   PWWEDE---------WEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMS 53
Query: 137 REAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRS 195
            +A + E  +++QL        R V++      +  I I+ E +   SL DFL+  +   
Sbjct: 54  PDAFLAEANLMKQLQHQ-----RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIK 107
Query: 196 FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 255
             I+ + ++A Q+ E +AF+ +   IH DL+  N+L+  +   K+ D+  +    +D+  
Sbjct: 108 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEX 166
Query: 256 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE 315
             R      IK                      + APE I    +T   D+WS G +L E
Sbjct: 167 TAREGAKFPIK----------------------WTAPEAINYGTFTIKSDVWSFGILLTE 204
Query: 316 LCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAAS 371
           + T G   +    N E +  +ER       + + R D   E+  +  RL W   PE   +
Sbjct: 205 IVTHGRIPYPGMTNPEVIQNLER------GYRMVRPDNCPEELYQLMRLCWKERPEDRPT 258
Query: 372 RESIKSVMK 380
            + ++SV++
Sbjct: 259 FDYLRSVLE 267

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 31/228 (13%)
Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD 154
            +  Y +  ++G+G F  V  C  +      A KI+   KK       ++E   ++ +  
Sbjct: 4   FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKII-NTKKLSARDFQKLEREARICRKL 62
Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
           +  N  V++ +     +   +VF+ + G  L++ +    + S   D    I +Q+LE IA
Sbjct: 63  QHPN-IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYS-EADASHCI-QQILESIA 119
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           + H   ++H +LKPEN+LL S                          K +A+K+ DFG  
Sbjct: 120 YCHSNGIVHRNLKPENLLLASK------------------------AKGAAVKLADFGLA 155
Query: 274 TYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                 + +     T  Y +PEV+    ++ P DIW+ G IL  L  G
Sbjct: 156 IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/309 (23%), Positives = 130/309 (42%), Gaps = 50/309 (16%)
Query: 77  PWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY 136
           PW ED+          E      K+  ++G G FG+V   +     + VA+K ++     
Sbjct: 2   PWWEDE---------WEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMS 51
Query: 137 REAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRS 195
            +A + E  +++QL        R V++      +  I I+ E +   SL DFL+  +   
Sbjct: 52  PDAFLAEANLMKQLQHQ-----RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIK 105
Query: 196 FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 255
             I+ + ++A Q+ E +AF+ +   IH DL+  N+L+  +   K+ D+  +    +D+  
Sbjct: 106 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEX 164
Query: 256 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE 315
             R      IK                      + APE I    +T   D+WS G +L E
Sbjct: 165 TAREGAKFPIK----------------------WTAPEAINYGTFTIKSDVWSFGILLTE 202
Query: 316 LCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAAS 371
           + T G   +    N E +  +ER       + + R D   E+  +  RL W   PE   +
Sbjct: 203 IVTHGRIPYPGMTNPEVIQNLER------GYRMVRPDNCPEELYQLMRLCWKERPEDRPT 256
Query: 372 RESIKSVMK 380
            + ++SV++
Sbjct: 257 FDYLRSVLE 265

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 88/225 (39%), Gaps = 46/225 (20%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           ++G G+FG+V    D++     A+K VR ++ +R   ++    L           R V +
Sbjct: 81  RLGRGSFGEVHRMEDKQTGFQCAVKKVR-LEVFRAEELMACAGLTS--------PRIVPL 131
Query: 164 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
                    + I  E L G SL   +++      P D       Q LE + ++H   ++H
Sbjct: 132 YGAVREGPWVNIFMELLEGGSLGQLVKEQG--CLPEDRALYYLGQALEGLEYLHSRRILH 189
Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-- 280
            D+K +NVLL S                            S   + DFG     +PD   
Sbjct: 190 GDVKADNVLLSSD--------------------------GSHAALCDFGHAVCLQPDGLG 223
Query: 281 ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                 +YI  T  + APEV+LG       D+WS  C+++ +  G
Sbjct: 224 KDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 104/233 (44%), Gaps = 37/233 (15%)
Query: 91  LGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR-GIK-KYREAAMIEIEVLQ 148
           +GE     ++  S++G G  G V +   R    ++A K++   IK   R   + E++VL 
Sbjct: 10  VGELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVL- 68
Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 207
               H+      V     F     I I  E + G SL   L++   +  P +++ +++  
Sbjct: 69  ----HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE--AKRIPEEILGKVSIA 122
Query: 208 LLECIAFMHDLCMI-HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           +L  +A++ +   I H D+KP N+L+ S   IK+ D+  S                   +
Sbjct: 123 VLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSG------------------Q 164
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
           +ID  + ++        V TR Y APE + G  ++   DIWS+G  LVEL  G
Sbjct: 165 LIDSMANSF--------VGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVG 209

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 38/233 (16%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDK 155
           Y++   +G G FG+V     +  +++ A+K++     IK+   A   E   +   A    
Sbjct: 76  YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN--- 132
Query: 156 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                VQ+   F    ++ +V E + G  L + +  +NY   P    R    +++  +  
Sbjct: 133 -SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNY-DVPEKWARFYTAEVVLALDA 188
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H +  IH D+KP+N+LL  S ++K+ D+ + +          +M K   ++        
Sbjct: 189 IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM----------KMNKEGMVRC------- 231
Query: 275 YERPDQNYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEALF 323
                 +  V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 232 ------DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278

>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant Length = 483

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/244 (22%), Positives = 109/244 (44%), Gaps = 48/244 (19%)
Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD 154
           + +++++  K+G G+FG++    + +  E VAIK+   +K      + E ++ + L    
Sbjct: 5   VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL-ENVKTKHPQLLYESKIYRIL---- 59
Query: 155 KGGNRCVQIRNWFDYR-NHICIVFEKLGSSLYDFLRKNNY--RSFPIDLVREIARQLLEC 211
           +GG     +R WF    ++  +V + LG SL D     N+  R   +  V  +A Q++  
Sbjct: 60  QGGTGIPNVR-WFGVEGDYNVLVMDLLGPSLEDLF---NFCSRKLSLKTVLMLADQMINR 115
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           + F+H    +H D+KP+N L+                            +++ + +IDFG
Sbjct: 116 VEFVHSKSFLHRDIKPDNFLMGLGR------------------------RANQVYIIDFG 151
Query: 272 -------STTYE----RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 320
                  ++T++    R ++N +  T  Y +    LG+  +   D+ S+G +L+    G 
Sbjct: 152 LAKKYRDTSTHQHIPYRENKN-LTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGS 210
Query: 321 ALFQ 324
             +Q
Sbjct: 211 LPWQ 214

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 38/233 (16%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDK 155
           Y++   +G G FG+V     +  +++ A+K++     IK+   A   E   +   A    
Sbjct: 71  YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA---- 126
Query: 156 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                VQ+   F    ++ +V E + G  L + +  +NY   P    R    +++  +  
Sbjct: 127 NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNY-DVPEKWARFYTAEVVLALDA 183
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H +  IH D+KP+N+LL  S ++K+ D+ + +          +M K   ++        
Sbjct: 184 IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM----------KMNKEGMVRC------- 226
Query: 275 YERPDQNYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEALF 323
                 +  V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 227 ------DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 73/309 (23%), Positives = 130/309 (42%), Gaps = 50/309 (16%)
Query: 77  PWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY 136
           PW ED+          E      K+  ++G G FG+V   +     + VA+K ++     
Sbjct: 3   PWWEDE---------WEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMS 52
Query: 137 REAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRS 195
            +A + E  +++QL        R V++      +  I I+ E +   SL DFL+  +   
Sbjct: 53  PDAFLAEANLMKQLQHQ-----RLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIK 106
Query: 196 FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 255
             I+ + ++A Q+ E +AF+ +   IH DL+  N+L+  +   K+ D+  +    +D+  
Sbjct: 107 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEX 165
Query: 256 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE 315
             R      IK                      + APE I    +T   D+WS G +L E
Sbjct: 166 TAREGAKFPIK----------------------WTAPEAINYGTFTIKSDVWSFGILLTE 203
Query: 316 LCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAAS 371
           + T G   +    N E +  +ER       + + R D   E+  +  RL W   PE   +
Sbjct: 204 IVTHGRIPYPGMTNPEVIQNLER------GYRMVRPDNCPEELYQLMRLCWKERPEDRPT 257
Query: 372 RESIKSVMK 380
            + ++SV++
Sbjct: 258 FDYLRSVLE 266

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVL 147
           E L S+Y++   +G G FG V           VAIK V    I  + E      + +EV+
Sbjct: 39  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 98
Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIA 205
             L K   G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R   
Sbjct: 99  L-LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 155
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            Q+LE +   H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y         
Sbjct: 156 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--------- 205
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
               DF  T    P +       H R+  V            WS+G +L ++  G+  F+
Sbjct: 206 ---TDFDGTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFE 250
Query: 325 THENL 329
             E +
Sbjct: 251 HDEEI 255

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVL 147
           E L S+Y++   +G G FG V           VAIK V    I  + E      + +EV+
Sbjct: 27  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 86
Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIA 205
             L K   G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R   
Sbjct: 87  L-LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 143
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            Q+LE +   H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y         
Sbjct: 144 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--------- 193
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
               DF  T    P +       H R+  V            WS+G +L ++  G+  F+
Sbjct: 194 ---TDFDGTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFE 238
Query: 325 THENL 329
             E +
Sbjct: 239 HDEEI 243

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVL 147
           E L S+Y++   +G G FG V           VAIK V    I  + E      + +EV+
Sbjct: 20  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIA 205
             L K   G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R   
Sbjct: 80  L-LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 136
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            Q+LE +   H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y         
Sbjct: 137 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--------- 186
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
               DF  T    P +       H R+  V            WS+G +L ++  G+  F+
Sbjct: 187 ---TDFDGTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFE 231
Query: 325 THENL 329
             E +
Sbjct: 232 HDEEI 236

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 112/250 (44%), Gaps = 45/250 (18%)
Query: 96  TSRYKIHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIKKYRE---AAMIEIEVLQQLA 151
            S   + +++G G+FG V +  W  +    VA+KI++ +    E   A   E+ VL++  
Sbjct: 35  ASEVMLSTRIGSGSFGTVYKGKWHGD----VAVKILKVVDPTPEQFQAFRNEVAVLRK-- 88
Query: 152 KHDKGGNRCVQIRNWFDY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL 208
                  R V I  +  Y  ++++ IV +   GSSLY  L     + F +  + +IARQ 
Sbjct: 89  ------TRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETK-FQMFQLIDIARQT 141
Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
            + + ++H   +IH D+K  N+ L     +K+ D+  +    + S               
Sbjct: 142 AQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS--------------- 186
Query: 269 DFGSTTYERPDQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQT 325
             GS   E+P  + +     + APEVI       +++  D++S G +L EL TGE  +  
Sbjct: 187 --GSQQVEQPTGSVL-----WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSH 239
Query: 326 HENLEHLAMM 335
             N + +  M
Sbjct: 240 INNRDQIIFM 249

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVL 147
           E L S+Y++   +G G FG V           VAIK V    I  + E      + +EV+
Sbjct: 52  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 111
Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIA 205
             L K   G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R   
Sbjct: 112 L-LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 168
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            Q+LE +   H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y         
Sbjct: 169 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--------- 218
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
               DF  T    P +       H R+  V            WS+G +L ++  G+  F+
Sbjct: 219 ---TDFDGTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFE 263
Query: 325 THENL 329
             E +
Sbjct: 264 HDEEI 268

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 41/221 (18%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR----EAAMIEIEVLQQLAKHDKGGNR 159
           ++G G+FG V    D    E+VAIK +    K      +  + E+  LQ+L +H      
Sbjct: 22  EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPN---- 76
Query: 160 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
            +Q R  +   +   +V E    S  D L  +      +++   +    L+ +A++H   
Sbjct: 77  TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-AVTHGALQGLAYLHSHN 135
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           MIH D+K  N+LL                            +   +K+ DFGS +   P 
Sbjct: 136 MIHRDVKAGNILL---------------------------SEPGLVKLGDFGSASIMAP- 167
Query: 280 QNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELC 317
            N  V T ++ APEVIL +    +    D+WS+G   +EL 
Sbjct: 168 ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 208

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVL 147
           E L S+Y++   +G G FG V           VAIK V    I  + E      + +EV+
Sbjct: 20  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIA 205
             L K   G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R   
Sbjct: 80  L-LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 136
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            Q+LE +   H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y         
Sbjct: 137 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--------- 186
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
               DF  T    P +       H R+  V            WS+G +L ++  G+  F+
Sbjct: 187 ---TDFDGTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFE 231
Query: 325 THENL 329
             E +
Sbjct: 232 HDEEI 236

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 38/233 (16%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDK 155
           Y++   +G G FG+V     +  +++ A+K++     IK+   A   E   +   A    
Sbjct: 76  YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN--- 132
Query: 156 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                VQ+   F    ++ +V E + G  L + +  +NY   P    R    +++  +  
Sbjct: 133 -SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNY-DVPEKWARFYTAEVVLALDA 188
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H +  IH D+KP+N+LL  S ++K+ D+ + +          +M K   ++        
Sbjct: 189 IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM----------KMNKEGMVRC------- 231
Query: 275 YERPDQNYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEALF 323
                 +  V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 232 ------DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVL 147
           E L S+Y++   +G G FG V           VAIK V    I  + E      + +EV+
Sbjct: 19  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 78
Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIA 205
             L K   G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R   
Sbjct: 79  L-LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 135
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            Q+LE +   H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y         
Sbjct: 136 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--------- 185
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
               DF  T    P +       H R+  V            WS+G +L ++  G+  F+
Sbjct: 186 ---TDFDGTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFE 230
Query: 325 THENL 329
             E +
Sbjct: 231 HDEEI 235

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 34/221 (15%)
Query: 105 MGEGTFGQV-LECWDRERK---EMVAIKIVRGIK--KYREAAMIEIEVLQQLA-KHDKGG 157
           +GEG FG+V L C+D       EMVA+K ++     ++R     EI++L+ L  +H    
Sbjct: 39  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 158 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             C +       +  + + +  LGS L D+L ++   S  +  +   A+Q+ E +A++H 
Sbjct: 99  KGCCEDAGAASLQ--LVMEYVPLGS-LRDYLPRH---SIGLAQLLLFAQQICEGMAYLHA 152
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
              IH DL   NVLL +   +K+ D+  +   P+    ++                   R
Sbjct: 153 QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRV------------------R 194
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
            D +   S   + APE +    + Y  D+WS G  L EL T
Sbjct: 195 EDGD---SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVL 147
           E L S+Y++   +G G FG V           VAIK V    I  + E      + +EV+
Sbjct: 19  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 78
Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIA 205
             L K   G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R   
Sbjct: 79  L-LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 135
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            Q+LE +   H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y         
Sbjct: 136 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--------- 185
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
               DF  T    P +       H R+  V            WS+G +L ++  G+  F+
Sbjct: 186 ---TDFDGTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFE 230
Query: 325 THENL 329
             E +
Sbjct: 231 HDEEI 235

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVL 147
           E L S+Y++   +G G FG V           VAIK V    I  + E      + +EV+
Sbjct: 20  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIA 205
             L K   G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R   
Sbjct: 80  L-LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 136
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            Q+LE +   H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y         
Sbjct: 137 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--------- 186
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
               DF  T    P +       H R+  V            WS+G +L ++  G+  F+
Sbjct: 187 ---TDFDGTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFE 231
Query: 325 THENL 329
             E +
Sbjct: 232 HDEEI 236

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVL 147
           E L S+Y++   +G G FG V           VAIK V    I  + E      + +EV+
Sbjct: 47  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 106
Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIA 205
             L K   G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R   
Sbjct: 107 L-LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 163
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            Q+LE +   H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y         
Sbjct: 164 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--------- 213
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
               DF  T    P +       H R+  V            WS+G +L ++  G+  F+
Sbjct: 214 ---TDFDGTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFE 258
Query: 325 THENL 329
             E +
Sbjct: 259 HDEEI 263

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVL 147
           E L S+Y++   +G G FG V           VAIK V    I  + E      + +EV+
Sbjct: 33  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIA 205
             L K   G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R   
Sbjct: 93  L-LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 149
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            Q+LE +   H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y         
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--------- 199
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
               DF  T    P +       H R+  V            WS+G +L ++  G+  F+
Sbjct: 200 ---TDFDGTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFE 244
Query: 325 THENL 329
             E +
Sbjct: 245 HDEEI 249

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVL 147
           E L S+Y++   +G G FG V           VAIK V    I  + E      + +EV+
Sbjct: 33  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIA 205
             L K   G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R   
Sbjct: 93  L-LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 149
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            Q+LE +   H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y         
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--------- 199
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
               DF  T    P +       H R+  V            WS+G +L ++  G+  F+
Sbjct: 200 ---TDFDGTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFE 244
Query: 325 THENL 329
             E +
Sbjct: 245 HDEEI 249

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVL 147
           E L S+Y++   +G G FG V           VAIK V    I  + E      + +EV+
Sbjct: 32  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIA 205
             L K   G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R   
Sbjct: 92  L-LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 148
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            Q+LE +   H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y         
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--------- 198
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
               DF  T    P +       H R+  V            WS+G +L ++  G+  F+
Sbjct: 199 ---TDFDGTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFE 243
Query: 325 THENL 329
             E +
Sbjct: 244 HDEEI 248

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVL 147
           E L S+Y++   +G G FG V           VAIK V    I  + E      + +EV+
Sbjct: 32  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIA 205
             L K   G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R   
Sbjct: 92  L-LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 148
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            Q+LE +   H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y         
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--------- 198
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
               DF  T    P +       H R+  V            WS+G +L ++  G+  F+
Sbjct: 199 ---TDFDGTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFE 243
Query: 325 THENL 329
             E +
Sbjct: 244 HDEEI 248

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVL 147
           E L S+Y++   +G G FG V           VAIK V    I  + E      + +EV+
Sbjct: 33  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIA 205
             L K   G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R   
Sbjct: 93  L-LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 149
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            Q+LE +   H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y         
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--------- 199
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
               DF  T    P +       H R+  V            WS+G +L ++  G+  F+
Sbjct: 200 ---TDFDGTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFE 244
Query: 325 THENL 329
             E +
Sbjct: 245 HDEEI 249

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVL 147
           E L S+Y++   +G G FG V           VAIK V    I  + E      + +EV+
Sbjct: 32  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIA 205
             L K   G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R   
Sbjct: 92  L-LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 148
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            Q+LE +   H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y         
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--------- 198
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
               DF  T    P +       H R+  V            WS+G +L ++  G+  F+
Sbjct: 199 ---TDFDGTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFE 243
Query: 325 THENL 329
             E +
Sbjct: 244 HDEEI 248

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVL 147
           E L S+Y++   +G G FG V           VAIK V    I  + E      + +EV+
Sbjct: 5   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIA 205
             L K   G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R   
Sbjct: 65  L-LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 121
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            Q+LE +   H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y         
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--------- 171
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
               DF  T    P +       H R+  V            WS+G +L ++  G+  F+
Sbjct: 172 ---TDFDGTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFE 216
Query: 325 THENL 329
             E +
Sbjct: 217 HDEEI 221

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVL 147
           E L S+Y++   +G G FG V           VAIK V    I  + E      + +EV+
Sbjct: 4   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIA 205
             L K   G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R   
Sbjct: 64  L-LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 120
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            Q+LE +   H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y         
Sbjct: 121 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--------- 170
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
               DF  T    P +       H R+  V            WS+G +L ++  G+  F+
Sbjct: 171 ---TDFDGTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFE 215
Query: 325 THENL 329
             E +
Sbjct: 216 HDEEI 220

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVL 147
           E L S+Y++   +G G FG V           VAIK V    I  + E      + +EV+
Sbjct: 32  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIA 205
             L K   G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R   
Sbjct: 92  L-LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 148
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            Q+LE +   H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y         
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--------- 198
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
               DF  T    P +       H R+  V            WS+G +L ++  G+  F+
Sbjct: 199 ---TDFDGTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFE 243
Query: 325 THENL 329
             E +
Sbjct: 244 HDEEI 248

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVL 147
           E L S+Y++   +G G FG V           VAIK V    I  + E      + +EV+
Sbjct: 5   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIA 205
             L K   G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R   
Sbjct: 65  L-LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 121
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            Q+LE +   H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y         
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--------- 171
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
               DF  T    P +       H R+  V            WS+G +L ++  G+  F+
Sbjct: 172 ---TDFDGTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFE 216
Query: 325 THENL 329
             E +
Sbjct: 217 HDEEI 221

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 114/264 (43%), Gaps = 44/264 (16%)
Query: 79  REDDKDGHYMFALGENLTSRYKIHS-----KMGEGTFGQVLECWDRERKEMVAIKIVRGI 133
           +E  K+G+    +G N ++R  I +      +G+G+FG+V+    +E  ++ A+K+++  
Sbjct: 3   KESSKEGN---GIGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKD 59
Query: 134 KKYR----EAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFL 188
              +    E  M E  +L     H        Q+   F   + +  V E + G  L   +
Sbjct: 60  VILQDDDVECTMTEKRILSLARNHP----FLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI 115
Query: 189 RKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH 248
           +K+  R F     R  A +++  + F+HD  +I+ DLK +NVLL    + K+ D+     
Sbjct: 116 QKS--RRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFG---- 169
Query: 249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWS 308
                     M K         G TT           T  Y APE++  + +    D W+
Sbjct: 170 ----------MCKEGICN----GVTTAT------FCGTPDYIAPEILQEMLYGPAVDWWA 209
Query: 309 VGCILVELCTGEALFQTHENLEHL 332
           +G +L E+  G A F+  EN + L
Sbjct: 210 MGVLLYEMLCGHAPFEA-ENEDDL 232

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVL 147
           E L S+Y++   +G G FG V           VAIK V    I  + E      + +EV+
Sbjct: 33  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIA 205
             L K   G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R   
Sbjct: 93  L-LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 149
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            Q+LE +   H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y         
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--------- 199
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
               DF  T    P +       H R+  V            WS+G +L ++  G+  F+
Sbjct: 200 ---TDFDGTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFE 244
Query: 325 THENL 329
             E +
Sbjct: 245 HDEEI 249

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVL 147
           E L S+Y++   +G G FG V           VAIK V    I  + E      + +EV+
Sbjct: 47  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 106
Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIA 205
             L K   G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R   
Sbjct: 107 L-LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 163
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            Q+LE +   H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y         
Sbjct: 164 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--------- 213
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
               DF  T    P +       H R+  V            WS+G +L ++  G+  F+
Sbjct: 214 ---TDFDGTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFE 258
Query: 325 THENL 329
             E +
Sbjct: 259 HDEEI 263

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVL 147
           E L S+Y++   +G G FG V           VAIK V    I  + E      + +EV+
Sbjct: 5   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIA 205
             L K   G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R   
Sbjct: 65  L-LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 121
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            Q+LE +   H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y         
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--------- 171
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
               DF  T    P +       H R+  V            WS+G +L ++  G+  F+
Sbjct: 172 ---TDFDGTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFE 216
Query: 325 THENL 329
             E +
Sbjct: 217 HDEEI 221

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/254 (21%), Positives = 112/254 (44%), Gaps = 53/254 (20%)
Query: 76  PPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK- 134
           PP  ++++D ++           ++I   +G+G+FG+V      + K+M A+K +   K 
Sbjct: 3   PPVFDENEDVNF---------DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKC 53
Query: 135 -KYREAAMI--EIEVLQQLAKHDKGGNRCVQIRNWFDYRNH---ICIVFEKLGSSLYDFL 188
            +  E   +  E++++Q       G      +  W+ +++      +V   LG  L   L
Sbjct: 54  VERNEVRNVFKELQIMQ-------GLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL 106
Query: 189 RKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH 248
           ++N +  F  + V+    +L+  + ++ +  +IH D+KP+N+LL    ++ + D+  +  
Sbjct: 107 QQNVH--FKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAM 164
Query: 249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVIL---GLGWTYPCD 305
            P+++                   TT        +  T+ Y APE+     G G+++  D
Sbjct: 165 LPRETQI-----------------TT--------MAGTKPYMAPEMFSSRKGAGYSFAVD 199
Query: 306 IWSVGCILVELCTG 319
            WS+G    EL  G
Sbjct: 200 WWSLGVTAYELLRG 213

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVL 147
           E L S+Y++   +G G FG V           VAIK V    I  + E      + +EV+
Sbjct: 3   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 62
Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIA 205
             L K   G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R   
Sbjct: 63  L-LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 119
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            Q+LE +   H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y         
Sbjct: 120 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY--------- 169
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
               DF  T    P +       H R+  V            WS+G +L ++  G+  F+
Sbjct: 170 ---TDFDGTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFE 214
Query: 325 THENL 329
             E +
Sbjct: 215 HDEEI 219

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 30/228 (13%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++I   +G+G FG V    +++   +VA+K++   +  +E    ++    ++  H    N
Sbjct: 25  FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPN 84
Query: 159 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             +++ N+F  R  I ++ E      LY  L+K+   +F       I  +L + + + H 
Sbjct: 85  -ILRLYNYFYDRRRIYLILEYAPRGELYKELQKSC--TFDEQRTATIMEELADALMYCHG 141
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
             +IH D+KPEN+LL     +K+ D+  S+H P      +R                   
Sbjct: 142 KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPS----LRR------------------- 178
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 325
                +  T  Y  PE+I G       D+W +G +  EL  G   F++
Sbjct: 179 ---KTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFES 223

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 43/228 (18%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYREAAMIEIE--VLQQLAKHD--KGGN 158
           +G G++ +VL    ++   + A+K+V+   +    +   ++ E  V +Q + H    G +
Sbjct: 17  IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 159 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 218
            C Q  +    R    I +   G  ++   R+   R  P +  R  + ++   + ++H+ 
Sbjct: 77  SCFQTES----RLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER 129
Query: 219 CMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
            +I+ DLK +NVLL S  +IK+ DY   K  L     +S F   P               
Sbjct: 130 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP--------------- 174
Query: 276 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 323
                NYI       APE++ G  + +  D W++G ++ E+  G + F
Sbjct: 175 -----NYI-------APEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 210

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 43/228 (18%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYREAAMIEIE--VLQQLAKHD--KGGN 158
           +G G++ +VL    ++   + A+K+V+   +    +   ++ E  V +Q + H    G +
Sbjct: 13  IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 159 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 218
            C Q  +    R    I +   G  ++   R+   R  P +  R  + ++   + ++H+ 
Sbjct: 73  SCFQTES----RLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER 125
Query: 219 CMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
            +I+ DLK +NVLL S  +IK+ DY   K  L     +S F   P               
Sbjct: 126 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP--------------- 170
Query: 276 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 323
                NYI       APE++ G  + +  D W++G ++ E+  G + F
Sbjct: 171 -----NYI-------APEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 206

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 163
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE-------NV 66
Query: 164 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 125 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 157
Query: 280 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 320
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 27/226 (11%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKG 156
           +++  ++G G FG VL    ++  E VAIK  R     K RE   +EI+++++L   +  
Sbjct: 17  WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 157 GNRCVQIRNWFDYRNHICIVFEKL--GSSLYDFLRK-NNYRSFPIDLVREIARQLLECIA 213
             R V         N + ++  +   G  L  +L +  N        +R +   +   + 
Sbjct: 77  SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 136
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H+  +IH DLKPEN++L        P  +  +H   D  Y K +         D G  
Sbjct: 137 YLHENRIIHRDLKPENIVL-------QPGPQRLIHKIIDLGYAKEL---------DQGEL 180
Query: 274 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
             E       V T  Y APE++    +T   D WS G +  E  TG
Sbjct: 181 CTE------FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 102/235 (43%), Gaps = 44/235 (18%)
Query: 104 KMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 162
           ++G G FG V L  W    K+ VAIK +R      E  + E EV+ +L+ H K     VQ
Sbjct: 17  EIGSGQFGLVHLGYW--LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPK----LVQ 69
Query: 163 IRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 221
           +      +  IC+VFE +    L D+LR      F  + +  +   + E +A++ + C+I
Sbjct: 70  LYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVI 128
Query: 222 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 281
           H DL   N L+                            ++  IKV DFG T +   DQ 
Sbjct: 129 HRDLAARNCLV---------------------------GENQVIKVSDFGMTRFVLDDQ- 160
Query: 282 YIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 330
           Y  ST       + +PEV     ++   D+WS G ++ E+ + G+  ++   N E
Sbjct: 161 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 215

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 102/235 (43%), Gaps = 44/235 (18%)
Query: 104 KMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 162
           ++G G FG V L  W    K+ VAIK +R      E  + E EV+ +L+ H K     VQ
Sbjct: 14  EIGSGQFGLVHLGYW--LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPK----LVQ 66
Query: 163 IRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 221
           +      +  IC+VFE +    L D+LR      F  + +  +   + E +A++ + C+I
Sbjct: 67  LYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVI 125
Query: 222 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 281
           H DL   N L+                            ++  IKV DFG T +   DQ 
Sbjct: 126 HRDLAARNCLV---------------------------GENQVIKVSDFGMTRFVLDDQ- 157
Query: 282 YIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 330
           Y  ST       + +PEV     ++   D+WS G ++ E+ + G+  ++   N E
Sbjct: 158 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 212

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 95/226 (42%), Gaps = 27/226 (11%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKG 156
           +++  ++G G FG VL    ++  E VAIK  R     K RE   +EI+++++L   +  
Sbjct: 16  WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 157 GNRCVQIRNWFDYRNHICIVFEKL--GSSLYDFLRK-NNYRSFPIDLVREIARQLLECIA 213
             R V         N + ++  +   G  L  +L +  N        +R +   +   + 
Sbjct: 76  SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 135
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H+  +IH DLKPEN++L        P  +  +H   D  Y K +         D G  
Sbjct: 136 YLHENRIIHRDLKPENIVL-------QPGPQRLIHKIIDLGYAKEL---------DQGEL 179
Query: 274 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
             E       V T  Y APE++    +T   D WS G +  E  TG
Sbjct: 180 CTE------FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 104/243 (42%), Gaps = 36/243 (14%)
Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVLQQ 149
           L S+Y++   +G G FG V           VAIK V    I  + E      + +EV+  
Sbjct: 2   LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL- 60
Query: 150 LAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQ 207
           L K   G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q
Sbjct: 61  LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQ 118
Query: 208 LLECIAFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           +LE +   H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y           
Sbjct: 119 VLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY----------- 166
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
             DF  T    P +       H R+  V            WS+G +L ++  G+  F+  
Sbjct: 167 -TDFDGTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHD 213
Query: 327 ENL 329
           E +
Sbjct: 214 EEI 216

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 43/228 (18%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYREAAMIEIE--VLQQLAKHD--KGGN 158
           +G G++ +VL    ++   + A+K+V+   +    +   ++ E  V +Q + H    G +
Sbjct: 28  IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 87
Query: 159 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 218
            C Q  +    R    I +   G  ++   R+   R  P +  R  + ++   + ++H+ 
Sbjct: 88  SCFQTES----RLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER 140
Query: 219 CMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
            +I+ DLK +NVLL S  +IK+ DY   K  L     +S F   P               
Sbjct: 141 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP--------------- 185
Query: 276 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 323
                NYI       APE++ G  + +  D W++G ++ E+  G + F
Sbjct: 186 -----NYI-------APEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 163
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE-------NV 67
Query: 164 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 126 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 158
Query: 280 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 320
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 102/235 (43%), Gaps = 44/235 (18%)
Query: 104 KMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 162
           ++G G FG V L  W    K+ VAIK +R      E  + E EV+ +L+ H K     VQ
Sbjct: 12  EIGSGQFGLVHLGYW--LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPK----LVQ 64
Query: 163 IRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 221
           +      +  IC+VFE +    L D+LR      F  + +  +   + E +A++ + C+I
Sbjct: 65  LYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVI 123
Query: 222 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 281
           H DL   N L+                            ++  IKV DFG T +   DQ 
Sbjct: 124 HRDLAARNCLV---------------------------GENQVIKVSDFGMTRFVLDDQ- 155
Query: 282 YIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 330
           Y  ST       + +PEV     ++   D+WS G ++ E+ + G+  ++   N E
Sbjct: 156 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 210

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 109/278 (39%), Gaps = 57/278 (20%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKI-----VRGIKKYREAAMIEIEVL 147
           E   + Y++   +G+G FG V        +  VAIK+     V G     ++    +EV 
Sbjct: 27  EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEV- 85
Query: 148 QQLAKHDKGGNR--CVQIRNWFDYRNHICIVFEKL--GSSLYDFL-RKNNYRSFPIDLVR 202
             L K   GG     +++ +WF+ +    +V E+      L+D++  K      P    R
Sbjct: 86  ALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGP---SR 142
Query: 203 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 262
               Q++  I   H   ++H D+K EN+L+                            + 
Sbjct: 143 CFFGQVVAAIQHCHSRGVVHRDIKDENILIDL--------------------------RR 176
Query: 263 SAIKVIDFGSTT--YERPDQNYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTG 319
              K+IDFGS    ++ P  ++   TR Y  PE I    +   P  +WS+G +L ++  G
Sbjct: 177 GCAKLIDFGSGALLHDEPYTDFD-GTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG 235
Query: 320 EALFQ-------------THENLEHLAMMERVLGPLPQ 344
           +  F+              H + +  A++ R L P P 
Sbjct: 236 DIPFERDQEILEAELHFPAHVSPDCCALIRRCLAPKPS 273

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 104/243 (42%), Gaps = 36/243 (14%)
Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVLQQ 149
           L S+Y++   +G G FG V           VAIK V    I  + E      + +EV+  
Sbjct: 2   LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL- 60
Query: 150 LAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQ 207
           L K   G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q
Sbjct: 61  LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQ 118
Query: 208 LLECIAFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           +LE +   H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y           
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY----------- 166
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
             DF  T    P +       H R+  V            WS+G +L ++  G+  F+  
Sbjct: 167 -TDFDGTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHD 213
Query: 327 ENL 329
           E +
Sbjct: 214 EEI 216

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 138/347 (39%), Gaps = 74/347 (21%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAK 152
           +NL    KI   +G G+ G V+     + +  VA+K  R +  + + A++EI++L +   
Sbjct: 14  KNLVVSEKI---LGYGSSGTVVFQGSFQGRP-VAVK--RMLIDFCDIALMEIKLLTESDD 67
Query: 153 H-DKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVRE-----IAR 206
           H +     C +  + F Y     I  E    +L D +   N     + L +E     + R
Sbjct: 68  HPNVIRYYCSETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 122
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+   +A +H L +IH DLKP+N+L+ +S          + +     S F         K
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF------GLCK 176
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLG-------WTYPCDIWSVGCILVELCTG 319
            +D G +++ R + N    T  +RAPE++            T   DI+S+GC+   + + 
Sbjct: 177 KLDSGQSSF-RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235
Query: 320 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVM 379
                               G  P           +KY R   +           I+ + 
Sbjct: 236 --------------------GKHP---------FGDKYSRESNI-----------IRGIF 255
Query: 380 KLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
            L  ++ L   H      + T L+  ++ +DP  R TA + LRHP F
Sbjct: 256 SLDEMKCL---HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 104/243 (42%), Gaps = 36/243 (14%)
Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYRE---AAMIEIEVLQQ 149
           L S+Y++   +G G FG V           VAIK V    I  + E      + +EV+  
Sbjct: 2   LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVL- 60
Query: 150 LAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQ 207
           L K   G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q
Sbjct: 61  LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQ 118
Query: 208 LLECIAFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           +LE +   H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y           
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY----------- 166
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
             DF  T    P +       H R+  V            WS+G +L ++  G+  F+  
Sbjct: 167 -TDFDGTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHD 213
Query: 327 ENL 329
           E +
Sbjct: 214 EEI 216

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 136/343 (39%), Gaps = 70/343 (20%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAK 152
           +NL    KI   +G G+ G V+     + +  VA+K  R +  + + A++EI++L +   
Sbjct: 32  KNLVVSEKI---LGYGSSGTVVFQGSFQGRP-VAVK--RMLIDFCDIALMEIKLLTESDD 85
Query: 153 H-DKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVRE-----IAR 206
           H +     C +  + F Y     I  E    +L D +   N     + L +E     + R
Sbjct: 86  HPNVIRYYCSETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 140
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+   +A +H L +IH DLKP+N+L+ +S          + +     S F         K
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF------GLCK 194
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVI---LGLGWTYPCDIWSVGCILVELCTGEALF 323
            +D G   + R + N    T  +RAPE++        T   DI+S+GC+   + +     
Sbjct: 195 KLDSGQXXF-RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSK---- 249
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
                           G  P           +KY R   +           I+ +  L  
Sbjct: 250 ----------------GKHP---------FGDKYSRESNI-----------IRGIFSLDE 273
Query: 384 LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
           ++ L   H      + T L+  ++ +DP  R TA + LRHP F
Sbjct: 274 MKCL---HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 163
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE-------NV 66
Query: 164 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 125 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 157
Query: 280 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 320
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 158 NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 163
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE-------NV 66
Query: 164 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 125 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 157
Query: 280 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 320
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 158 NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 163
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE-------NV 67
Query: 164 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 126 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 158
Query: 280 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 320
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 163
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE-------NV 67
Query: 164 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 126 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 158
Query: 280 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 320
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 163
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE-------NV 67
Query: 164 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 126 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 158
Query: 280 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 320
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 136/343 (39%), Gaps = 70/343 (20%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAK 152
           +NL    KI   +G G+ G V+     + +  VA+K  R +  + + A++EI++L +   
Sbjct: 32  KNLVVSEKI---LGYGSSGTVVFQGSFQGRP-VAVK--RMLIDFCDIALMEIKLLTESDD 85
Query: 153 H-DKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVRE-----IAR 206
           H +     C +  + F Y     I  E    +L D +   N     + L +E     + R
Sbjct: 86  HPNVIRYYCSETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 140
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+   +A +H L +IH DLKP+N+L+ +S          + +     S F         K
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF------GLCK 194
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVI---LGLGWTYPCDIWSVGCILVELCTGEALF 323
            +D G   + R + N    T  +RAPE++        T   DI+S+GC+   + +     
Sbjct: 195 KLDSGQXXF-RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSK---- 249
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
                           G  P           +KY R   +           I+ +  L  
Sbjct: 250 ----------------GKHP---------FGDKYSRESNI-----------IRGIFSLDE 273
Query: 384 LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
           ++ L   H      + T L+  ++ +DP  R TA + LRHP F
Sbjct: 274 MKCL---HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 163
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE-------NV 66
Query: 164 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 125 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 157
Query: 280 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 320
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 163
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE-------NV 67
Query: 164 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 126 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 158
Query: 280 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 320
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 159 NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 100 KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 154
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 13  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 71
Query: 155 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
                 V+ +   +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + 
Sbjct: 72  N----IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKG 126
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 270
           + ++     IH DL   N+L+ +   +K+ D+  +   P+D  +FK + P  S I     
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI----- 181
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                             + APE +    ++   D+WS G +L EL T
Sbjct: 182 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 163
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE-------NV 66
Query: 164 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 125 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 157
Query: 280 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 320
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 158 NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing Residues 1-317 Complex With Bound Tungstate Length = 317

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 103/239 (43%), Gaps = 42/239 (17%)
Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKG 156
           +RY++  K+G G+FG +    D    E VAIK+   +K       IE ++ + +    +G
Sbjct: 7   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL-ECVKTKHPQLHIESKIYKMM----QG 61
Query: 157 GNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 216
           G     IR      ++  +V E LG SL D     + R F +  V  +A Q++  I ++H
Sbjct: 62  GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIH 120
Query: 217 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG----- 271
               IH D+KP+N L+   +                        K + + +IDFG     
Sbjct: 121 SKNFIHRDVKPDNFLMGLGK------------------------KGNLVYIIDFGLAKKY 156
Query: 272 --STTYE----RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
             + T++    R ++N +  T  Y +    LG+  +   D+ S+G +L+    G   +Q
Sbjct: 157 RDARTHQHIPYRENKN-LTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ 214

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 123/286 (43%), Gaps = 41/286 (14%)
Query: 100 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 159
           K+  ++G G  G+V   +     + VA+K ++      +A + E  +++QL        R
Sbjct: 16  KLVERLGAGQAGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQ-----R 69
Query: 160 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 218
            V++      +  I I+ E +   SL DFL+  +     I+ + ++A Q+ E +AF+ + 
Sbjct: 70  LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
             IH DL+  N+L+  +   K+ D+  +    +D+    R      IK            
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDAEXTAREGAKFPIK------------ 175
Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMER 337
                     + APE I    +T   D+WS G +L E+ T G   +    N E +  +ER
Sbjct: 176 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
Query: 338 VLGPLPQHMLKRVDRHAEKYVRRGRLDW---PEGAASRESIKSVMK 380
                  + + R D   E+  +  RL W   PE   + + ++SV++
Sbjct: 226 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265

>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d Length = 296

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 103/239 (43%), Gaps = 42/239 (17%)
Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKG 156
           +RY++  K+G G+FG +    D    E VAIK+   +K       IE ++ + +    +G
Sbjct: 9   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL-ECVKTKHPQLHIESKIYKMM----QG 63
Query: 157 GNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 216
           G     IR      ++  +V E LG SL D     + R F +  V  +A Q++  I ++H
Sbjct: 64  GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIH 122
Query: 217 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG----- 271
               IH D+KP+N L+   +                        K + + +IDFG     
Sbjct: 123 SKNFIHRDVKPDNFLMGLGK------------------------KGNLVYIIDFGLAKKY 158
Query: 272 --STTYE----RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
             + T++    R ++N +  T  Y +    LG+  +   D+ S+G +L+    G   +Q
Sbjct: 159 RDARTHQHIPYRENKN-LTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ 216

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/339 (21%), Positives = 134/339 (39%), Gaps = 87/339 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHD 154
           + +H  +G G FG+V  C   +  +M A+K +      +K+    A+ E  +L  ++  D
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                C+     F   + +  + + + G  L+  L ++    F    +R  A +++  + 
Sbjct: 251 CPFIVCMSYA--FHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLE 306
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
            MH+  +++ DLKP N+LL    ++++ D   +        + K+ P +S          
Sbjct: 307 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLA------CDFSKKKPHAS---------- 350
Query: 274 TYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 332
                     V T  Y APEV+  G+ +    D +S+GC+L +L  G + F+ H      
Sbjct: 351 ----------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH------ 394
Query: 333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 392
                          K  D+H                  R ++   ++LP          
Sbjct: 395 ---------------KTKDKH---------------EIDRMTLTMAVELP---------- 414
Query: 393 DHSAGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 426
           D  + +L  LL+GLL+ D   RL      A+E    PFF
Sbjct: 415 DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 74/339 (21%), Positives = 134/339 (39%), Gaps = 87/339 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHD 154
           + +H  +G G FG+V  C   +  +M A+K +      +K+    A+ E  +L  ++  D
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 249
Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                C+     F   + +  + + + G  L+  L ++    F    +R  A +++  + 
Sbjct: 250 CPFIVCMSYA--FHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLE 305
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
            MH+  +++ DLKP N+LL    ++++ D   +        + K+ P +S          
Sbjct: 306 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLA------CDFSKKKPHAS---------- 349
Query: 274 TYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 332
                     V T  Y APEV+  G+ +    D +S+GC+L +L  G + F+ H      
Sbjct: 350 ----------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH------ 393
Query: 333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 392
                          K  D+H                  R ++   ++LP          
Sbjct: 394 ---------------KTKDKH---------------EIDRMTLTMAVELP---------- 413
Query: 393 DHSAGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 426
           D  + +L  LL+GLL+ D   RL      A+E    PFF
Sbjct: 414 DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 452

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 88/225 (39%), Gaps = 46/225 (20%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           ++G G+FG+V    D++     A+K VR ++ +R   ++    L           R V +
Sbjct: 79  RLGRGSFGEVHRMKDKQTGFQCAVKKVR-LEVFRVEELVACAGLSS--------PRIVPL 129
Query: 164 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
                    + I  E L G SL   +++      P D       Q LE + ++H   ++H
Sbjct: 130 YGAVREGPWVNIFMELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRRILH 187
Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-- 280
            D+K +NVLL S                            S   + DFG     +PD   
Sbjct: 188 GDVKADNVLLSSD--------------------------GSRAALCDFGHALCLQPDGLG 221
Query: 281 ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                 +YI  T  + APEV++G       DIWS  C+++ +  G
Sbjct: 222 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 117/275 (42%), Gaps = 49/275 (17%)
Query: 61  TSSSLFVKGVARNGSPPWRE---DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECW 117
           T+ +L+ +G   +G    +E     + G    +LG      + +   +G G++ +VL   
Sbjct: 16  TTENLYFQGAMGSGIEEEKEAMNTRESGKASSSLG---LQDFDLLRVIGRGSYAKVLLVR 72
Query: 118 DRERKEMVAIKIVRG--IKKYREAAMIEIE--VLQQLAKHD--KGGNRCVQIRNWFDYRN 171
            ++   + A+++V+   +    +   ++ E  V +Q + H    G + C Q  +    R 
Sbjct: 73  LKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES----RL 128
Query: 172 HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVL 231
              I +   G  ++   R+   R  P +  R  + ++   + ++H+  +I+ DLK +NVL
Sbjct: 129 FFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVL 185
Query: 232 LVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRH 288
           L S  +IK+ DY   K  L     +S F   P                    NYI     
Sbjct: 186 LDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP--------------------NYI----- 220
Query: 289 YRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 323
             APE++ G  + +  D W++G ++ E+  G + F
Sbjct: 221 --APEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 163
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 13  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE-------NV 65
Query: 164 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 66  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 123
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 124 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 156
Query: 280 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 320
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 157 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 98/232 (42%), Gaps = 25/232 (10%)
Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-EIEVLQQLAKHDKG 156
           R ++   + EG F  V E  D       A+K +   ++ +  A+I E+  +++L+ H   
Sbjct: 29  RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88
Query: 157 GNRC----VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRS-FPIDLVREIARQLLEC 211
              C    +        +    ++ E     L +FL+K   R     D V +I  Q    
Sbjct: 89  VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148
Query: 212 IAFMH--DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
           +  MH     +IH DLK EN+LL +   IK+ D+ S+        Y     + + ++   
Sbjct: 149 VQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVE--- 205
Query: 270 FGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPC----DIWSVGCILVELC 317
                 E   +N   +T  YR PE+I  L   +P     DIW++GCIL  LC
Sbjct: 206 ------EEITRN---TTPMYRTPEII-DLYSNFPIGEKQDIWALGCILYLLC 247

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 163
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE-------NV 66
Query: 164 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 125 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 157
Query: 280 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 320
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 47/233 (20%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGG 157
           + +   +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+   
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 65
Query: 158 NRCVQIRNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  + 
Sbjct: 66  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 119
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H + + H D+KPEN+LL         D + +L                  K+ DFG  
Sbjct: 120 YLHGIGITHRDIKPENLLL---------DERDNL------------------KISDFGLA 152
Query: 274 TYERPDQ-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 320
           T  R +      N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 153 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 21/121 (17%)
Query: 203 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 262
           E+     + + F H   +IH D+KP N+L+ ++  +KV D+                   
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDF------------------G 161
Query: 263 SAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL 322
            A  + D G++  +      ++ T  Y +PE   G       D++S+GC+L E+ TGE  
Sbjct: 162 IARAIADSGNSVXQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 323 F 323
           F
Sbjct: 219 F 219

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 74/339 (21%), Positives = 134/339 (39%), Gaps = 87/339 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHD 154
           + +H  +G G FG+V  C   +  +M A+K +      +K+    A+ E  +L  ++  D
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                C+     F   + +  + + + G  L+  L ++    F    +R  A +++  + 
Sbjct: 251 CPFIVCMSYA--FHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLE 306
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
            MH+  +++ DLKP N+LL    ++++ D   +        + K+ P +S          
Sbjct: 307 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLA------CDFSKKKPHAS---------- 350
Query: 274 TYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 332
                     V T  Y APEV+  G+ +    D +S+GC+L +L  G + F+ H      
Sbjct: 351 ----------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH------ 394
Query: 333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 392
                          K  D+H                  R ++   ++LP          
Sbjct: 395 ---------------KTKDKH---------------EIDRMTLTMAVELP---------- 414
Query: 393 DHSAGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 426
           D  + +L  LL+GLL+ D   RL      A+E    PFF
Sbjct: 415 DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 74/339 (21%), Positives = 134/339 (39%), Gaps = 87/339 (25%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHD 154
           + +H  +G G FG+V  C   +  +M A+K +      +K+    A+ E  +L  ++  D
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                C+     F   + +  + + + G  L+  L ++    F    +R  A +++  + 
Sbjct: 251 CPFIVCMSYA--FHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLE 306
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
            MH+  +++ DLKP N+LL    ++++ D   +        + K+ P +S          
Sbjct: 307 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLA------CDFSKKKPHAS---------- 350
Query: 274 TYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 332
                     V T  Y APEV+  G+ +    D +S+GC+L +L  G + F+ H      
Sbjct: 351 ----------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH------ 394
Query: 333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 392
                          K  D+H                  R ++   ++LP          
Sbjct: 395 ---------------KTKDKH---------------EIDRMTLTMAVELP---------- 414
Query: 393 DHSAGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 426
           D  + +L  LL+GLL+ D   RL      A+E    PFF
Sbjct: 415 DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 99/221 (44%), Gaps = 34/221 (15%)
Query: 105 MGEGTFGQV-LECWDRERK---EMVAIKIVR-GIK-KYREAAMIEIEVLQQLA-KHDKGG 157
           +GEG FG+V L C+D       EMVA+K ++ G   + R     EIE+L+ L  +H    
Sbjct: 16  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 158 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             C + +   +    + + +  LGS L D+L ++      + L    A+Q+ E +A++H 
Sbjct: 76  KGCCEDQG--EKSVQLVMEYVPLGS-LRDYLPRHCVGLAQLLL---FAQQICEGMAYLHA 129
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
              IH  L   NVLL +   +K+ D+  +   P+   Y++                   R
Sbjct: 130 QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV------------------R 171
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
            D +   S   + APE +    + Y  D+WS G  L EL T
Sbjct: 172 EDGD---SPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 47/233 (20%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGG 157
           + +   +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+   
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 158 NRCVQIRNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  + 
Sbjct: 65  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 118
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H + + H D+KPEN+LL         D + +L                  K+ DFG  
Sbjct: 119 YLHGIGITHRDIKPENLLL---------DERDNL------------------KISDFGLA 151
Query: 274 TYERPDQ-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 320
           T  R +      N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 152 TVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 47/227 (20%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGGNRCVQI 163
           +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+        +
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE-------NV 66
Query: 164 RNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
             ++ +R    I +  L    G  L+D +  +     P    +    QL+  + ++H + 
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           + H D+KPEN+LL         D + +L                  K+ DFG  T  R +
Sbjct: 125 ITHRDIKPENLLL---------DERDNL------------------KISDFGLATVFRYN 157
Query: 280 Q-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 320
                 N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 158 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 34/221 (15%)
Query: 105 MGEGTFGQV-LECWDRERK---EMVAIKIVR-GIK-KYREAAMIEIEVLQQLA-KHDKGG 157
           +GEG FG+V L C+D       EMVA+K ++ G   + R     EIE+L+ L  +H    
Sbjct: 17  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 158 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             C + +   +    + + +  LGS L D+L ++      +  +   A+Q+ E +A++H 
Sbjct: 77  KGCCEDQG--EKSVQLVMEYVPLGS-LRDYLPRH---CVGLAQLLLFAQQICEGMAYLHA 130
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
              IH  L   NVLL +   +K+ D+  +   P+   Y++                   R
Sbjct: 131 QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV------------------R 172
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
            D +   S   + APE +    + Y  D+WS G  L EL T
Sbjct: 173 EDGD---SPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 47/233 (20%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGG 157
           + +   +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+   
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 158 NRCVQIRNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  + 
Sbjct: 65  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 118
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H + + H D+KPEN+LL         D + +L                  K+ DFG  
Sbjct: 119 YLHGIGITHRDIKPENLLL---------DERDNL------------------KISDFGLA 151
Query: 274 TYERPDQ-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 320
           T  R +      N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 152 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 88/225 (39%), Gaps = 46/225 (20%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           ++G G+FG+V    D++     A+K VR ++ +R   ++    L           R V +
Sbjct: 65  RVGRGSFGEVHRMKDKQTGFQCAVKKVR-LEVFRVEELVACAGLSS--------PRIVPL 115
Query: 164 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
                    + I  E L G SL   +++      P D       Q LE + ++H   ++H
Sbjct: 116 YGAVREGPWVNIFMELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRRILH 173
Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-- 280
            D+K +NVLL S                            S   + DFG     +PD   
Sbjct: 174 GDVKADNVLLSSD--------------------------GSRAALCDFGHALCLQPDGLG 207
Query: 281 ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                 +YI  T  + APEV++G       DIWS  C+++ +  G
Sbjct: 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 47/233 (20%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGG 157
           + +   +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+   
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 158 NRCVQIRNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  + 
Sbjct: 65  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 118
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H + + H D+KPEN+LL         D + +L                  K+ DFG  
Sbjct: 119 YLHGIGITHRDIKPENLLL---------DERDNL------------------KISDFGLA 151
Query: 274 TYERPDQ-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 320
           T  R +      N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 152 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 88/225 (39%), Gaps = 46/225 (20%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           ++G G+FG+V    D++     A+K VR ++ +R   ++    L           R V +
Sbjct: 81  RVGRGSFGEVHRMKDKQTGFQCAVKKVR-LEVFRVEELVACAGLSS--------PRIVPL 131
Query: 164 RNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
                    + I  E L G SL   +++      P D       Q LE + ++H   ++H
Sbjct: 132 YGAVREGPWVNIFMELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRRILH 189
Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-- 280
            D+K +NVLL S                            S   + DFG     +PD   
Sbjct: 190 GDVKADNVLLSSD--------------------------GSRAALCDFGHALCLQPDGLG 223
Query: 281 ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                 +YI  T  + APEV++G       DIWS  C+++ +  G
Sbjct: 224 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 47/233 (20%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGG 157
           + +   +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+   
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 158 NRCVQIRNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  + 
Sbjct: 65  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 118
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H + + H D+KPEN+LL         D + +L                  K+ DFG  
Sbjct: 119 YLHGIGITHRDIKPENLLL---------DERDNL------------------KISDFGLA 151
Query: 274 TYERPDQ-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 320
           T  R +      N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 152 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 47/233 (20%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGG 157
           + +   +GEG +G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+   
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 65
Query: 158 NRCVQIRNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  + 
Sbjct: 66  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 119
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H + + H D+KPEN+LL         D + +L                  K+ DFG  
Sbjct: 120 YLHGIGITHRDIKPENLLL---------DERDNL------------------KISDFGLA 152
Query: 274 TYERPDQ-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 320
           T  R +      N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 153 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/238 (22%), Positives = 96/238 (40%), Gaps = 29/238 (12%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++I   +G G F +V     ++  ++ A+KI   + K+      E+   ++       G+
Sbjct: 63  FEILKVIGRGAFSEVAVVKMKQTGQVYAMKI---MNKWDMLKRGEVSCFREERDVLVNGD 119
Query: 159 R--CVQIRNWFDYRNHICIVFEK-LGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
           R    Q+   F   N++ +V E  +G  L   L K   R  P ++ R    +++  I  +
Sbjct: 120 RRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGER-IPAEMARFYLAEIVMAIDSV 178
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H L  +H D+KP+N+LL    +I++ D+ S L    D          +   ++  G+  Y
Sbjct: 179 HRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRAD---------GTVRSLVAVGTPDY 229
Query: 276 ERPDQNYIV---STRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
             P+    V          PE          CD W++G    E+  G+  F      E
Sbjct: 230 LSPEILQAVGGGPGTGSYGPE----------CDWWALGVFAYEMFYGQTPFYADSTAE 277

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 100/235 (42%), Gaps = 37/235 (15%)
Query: 89  FALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR-GIK-KYREAAMIEIEV 146
            ALGE     ++  S++G G  G V +   +    ++A K++   IK   R   + E++V
Sbjct: 1   MALGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV 60
Query: 147 LQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIA 205
           L     H+      V     F     I I  E + G SL   L+K      P  ++ +++
Sbjct: 61  L-----HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVS 113
Query: 206 RQLLECIAFMHDL-CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             +++ + ++ +   ++H D+KP N+L+ S   IK+ D+  S                  
Sbjct: 114 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS------------------ 155
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                 G    E    N  V TR Y +PE + G  ++   DIWS+G  LVE+  G
Sbjct: 156 ------GQLIDEM--ANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 202

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 22/141 (15%)
Query: 203 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 262
           E+     + + F H   +IH D+KP N+++ ++  +KV D+                   
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDF------------------G 161
Query: 263 SAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL 322
            A  + D G++  +      ++ T  Y +PE   G       D++S+GC+L E+ TGE  
Sbjct: 162 IARAIADSGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 323 FQTHENLEHLAMMERVLGPLP 343
           F T ++ + +A       P+P
Sbjct: 219 F-TGDSPDSVAYQHVREDPIP 238

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 44/235 (18%)
Query: 104 KMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 162
           ++G G FG V L  W    K+ VAIK ++      +  + E EV+ +L+ H K     VQ
Sbjct: 34  EIGSGQFGLVHLGYW--LNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLS-HPK----LVQ 86
Query: 163 IRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 221
           +      +  IC+VFE +    L D+LR      F  + +  +   + E +A++ + C+I
Sbjct: 87  LYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVI 145
Query: 222 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 281
           H DL   N L+                            ++  IKV DFG T +   DQ 
Sbjct: 146 HRDLAARNCLV---------------------------GENQVIKVSDFGMTRFVLDDQ- 177
Query: 282 YIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 330
           Y  ST       + +PEV     ++   D+WS G ++ E+ + G+  ++   N E
Sbjct: 178 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 232

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 97/233 (41%), Gaps = 47/233 (20%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGG 157
           + +   +GEG +G+V    +R  +E VA+KIV   +       I+ E+ +  +  H+   
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE--- 65
Query: 158 NRCVQIRNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  + 
Sbjct: 66  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 119
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H + + H D+KPEN+LL         D + +L                  K+ DFG  
Sbjct: 120 YLHGIGITHRDIKPENLLL---------DERDNL------------------KISDFGLA 152
Query: 274 TYERPDQ-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 320
           T  R +      N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 153 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 21/121 (17%)
Query: 203 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 262
           E+     + + F H   +IH D+KP N+++ ++  +KV D+                   
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDF------------------G 161
Query: 263 SAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL 322
            A  + D G++  +      ++ T  Y +PE   G       D++S+GC+L E+ TGE  
Sbjct: 162 IARAIADSGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 323 F 323
           F
Sbjct: 219 F 219

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 21/121 (17%)
Query: 203 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 262
           E+     + + F H   +IH D+KP N+++ ++  +KV D+                   
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDF------------------G 161
Query: 263 SAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL 322
            A  + D G++  +      ++ T  Y +PE   G       D++S+GC+L E+ TGE  
Sbjct: 162 IARAIADSGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 323 F 323
           F
Sbjct: 219 F 219

>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 136/347 (39%), Gaps = 74/347 (21%)
Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAK 152
           +NL    KI   +G G+ G V+     + +  VA+K  R +  + + A++EI++L +   
Sbjct: 14  KNLVVSEKI---LGYGSSGTVVFQGSFQGRP-VAVK--RMLIDFCDIALMEIKLLTESDD 67
Query: 153 H-DKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVRE-----IAR 206
           H +     C +  + F Y     I  E    +L D +   N     + L +E     + R
Sbjct: 68  HPNVIRYYCSETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 122
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+   +A +H L +IH DLKP+N+L+ +S          + +     S F         K
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF------GLCK 176
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLG-------WTYPCDIWSVGCILVELCTG 319
            +D G   + R + N    T  +RAPE++            T   DI+S+GC+   + + 
Sbjct: 177 KLDSGQXXF-RXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235
Query: 320 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVM 379
                               G  P           +KY R   +           I+ + 
Sbjct: 236 --------------------GKHP---------FGDKYSRESNI-----------IRGIF 255
Query: 380 KLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
            L  ++ L   H      + T L+  ++ +DP  R TA + LRHP F
Sbjct: 256 SLDEMKCL---HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 21/121 (17%)
Query: 203 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 262
           E+     + + F H   +IH D+KP N+++ ++  +KV D+                   
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDF------------------G 161
Query: 263 SAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL 322
            A  + D G++  +      ++ T  Y +PE   G       D++S+GC+L E+ TGE  
Sbjct: 162 IARAIADSGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 323 F 323
           F
Sbjct: 219 F 219

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 100 KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 154
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 14  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 72
Query: 155 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
                 V+ +   +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + 
Sbjct: 73  N----IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKG 127
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 270
           + ++     IH +L   N+L+ +   +K+ D+  +   P+D  Y+K + P  S I     
Sbjct: 128 MEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPI----- 182
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                             + APE +    ++   D+WS G +L EL T
Sbjct: 183 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 213

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 111/257 (43%), Gaps = 46/257 (17%)
Query: 103 SKMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
            +MG GT GQV +   R+   ++A+K +R  G K+  +  +++++V+  L  HD     C
Sbjct: 31  GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVV--LKSHD-----C 83
Query: 161 ---VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
              VQ    F     + I  E +G+   + L+K      P  ++ ++   +++ + ++ +
Sbjct: 84  PYIVQCFGTFITNTDVFIAMELMGTCA-EKLKKRMQGPIPERILGKMTVAIVKALYYLKE 142
Query: 218 L-CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 276
              +IH D+KP N+LL     IK+ D+  S     D +                      
Sbjct: 143 KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA---------------------- 180
Query: 277 RPDQNYIVSTRHYRAPEVILGLGWTYP-----CDIWSVGCILVELCTGEALFQT-HENLE 330
              ++       Y APE I     T P      D+WS+G  LVEL TG+  ++    + E
Sbjct: 181 ---KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE 237
Query: 331 HLAMMERVLGP-LPQHM 346
            L  + +   P LP HM
Sbjct: 238 VLTKVLQEEPPLLPGHM 254

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 43/227 (18%)
Query: 103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEI---EVLQQLAKHDKGGNR 159
           +KMGEG FG V + +       VA+K        + AAM++I   E+ QQ  +  K   +
Sbjct: 37  NKMGEGGFGVVYKGY--VNNTTVAVK--------KLAAMVDITTEELKQQFDQEIKVMAK 86
Query: 160 C-----VQIRNWFDYRNHICIVFEKL-GSSLYDFLR-KNNYRSFPIDLVREIARQLLECI 212
           C     V++  +    + +C+V+  +   SL D L   +        +  +IA+     I
Sbjct: 87  CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 146
Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
            F+H+   IH D+K  N+LL  +   K+ D+  +  + K                  F  
Sbjct: 147 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEK------------------FAQ 188
Query: 273 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
           T       + IV T  Y APE + G   T   DI+S G +L+E+ TG
Sbjct: 189 TVM----XSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 117/278 (42%), Gaps = 37/278 (13%)
Query: 100 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 159
           K+  ++G G FG+V   +     + VA+K ++      +A + E  +++ L +HDK    
Sbjct: 16  KLVKRLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQAFLEEANLMKTL-QHDK---- 69
Query: 160 CVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 218
            V++         I I+ E +   SL DFL+ +      +  + + + Q+ E +A++   
Sbjct: 70  LVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 129
Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
             IH DL+  NVL+  S   K+ D+  +    +D+ Y  R      IK            
Sbjct: 130 NYIHRDLRAANVLVSESLMCKIADFGLA-RVIEDNEYTAREGAKFPIK------------ 176
Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMER 337
                     + APE I    +T   D+WS G +L E+ T G+  +    N + +  + +
Sbjct: 177 ----------WTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQ 226
Query: 338 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESI 375
                  + + RV+   ++     ++ W E A  R + 
Sbjct: 227 ------GYRMPRVENCPDELYDIMKMCWKEKAEERPTF 258

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 21/121 (17%)
Query: 203 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 262
           E+     + + F H   +IH D+KP N+++ ++  +KV D+                   
Sbjct: 137 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDF------------------G 178
Query: 263 SAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL 322
            A  + D G++  +      ++ T  Y +PE   G       D++S+GC+L E+ TGE  
Sbjct: 179 IARAIADSGNSVTQ---TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
Query: 323 F 323
           F
Sbjct: 236 F 236

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 97/233 (41%), Gaps = 47/233 (20%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV-LQQLAKHDKGG 157
           + +   +GEG  G+V    +R  +E VA+KIV   +       I+ E+ + ++  H+   
Sbjct: 8   WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 158 NRCVQIRNWFDYRNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  + 
Sbjct: 65  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVV 118
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H + + H D+KPEN+LL         D + +L                  K+ DFG  
Sbjct: 119 YLHGIGITHRDIKPENLLL---------DERDNL------------------KISDFGLA 151
Query: 274 TYERPDQ-----NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGE 320
           T  R +      N +  T  Y APE++    +   P D+WS G +L  +  GE
Sbjct: 152 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 106/243 (43%), Gaps = 41/243 (16%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI----EIEVLQQLAKHD 154
           ++I   +G G FG+V     +   ++ A+KI+   +  + A       E +VL       
Sbjct: 76  FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN----- 130
Query: 155 KGGNRCVQIRNW-FDYRNHICIVFEK-LGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
            G ++ +   ++ F   N++ +V +  +G  L   L K   R  P ++ R    +++  I
Sbjct: 131 -GDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR-LPEEMARFYLAEMVIAI 188
Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
             +H L  +H D+KP+N+L+  + +I++ D+ S L   +D +      +SS         
Sbjct: 189 DSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV-----QSSV-------- 235
Query: 273 TTYERPDQNYIVSTRHYRAPEVIL----GLGWTYP-CDIWSVGCILVELCTGEALFQTHE 327
                      V T  Y +PE++     G G   P CD WS+G  + E+  GE  F    
Sbjct: 236 ----------AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES 285
Query: 328 NLE 330
            +E
Sbjct: 286 LVE 288

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 37/233 (15%)
Query: 91  LGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR-GIK-KYREAAMIEIEVLQ 148
           +GE     ++  S++G G  G V +   +    ++A K++   IK   R   + E++VL 
Sbjct: 62  VGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL- 120
Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 207
               H+      V     F     I I  E + G SL   L+K      P  ++ +++  
Sbjct: 121 ----HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIA 174
Query: 208 LLECIAFMHDL-CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           +++ + ++ +   ++H D+KP N+L+ S   IK+ D+  S                   +
Sbjct: 175 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG------------------Q 216
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
           +ID  + ++        V TR Y +PE + G  ++   DIWS+G  LVE+  G
Sbjct: 217 LIDSMANSF--------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 261

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 97/227 (42%), Gaps = 43/227 (18%)
Query: 103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEI---EVLQQLAKHDKGGNR 159
           +KMGEG FG V + +       VA+K        + AAM++I   E+ QQ  +  K   +
Sbjct: 37  NKMGEGGFGVVYKGY--VNNTTVAVK--------KLAAMVDITTEELKQQFDQEIKVMAK 86
Query: 160 C-----VQIRNWFDYRNHICIVFEKL-GSSLYDFLR-KNNYRSFPIDLVREIARQLLECI 212
           C     V++  +    + +C+V+  +   SL D L   +        +  +IA+     I
Sbjct: 87  CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 146
Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
            F+H+   IH D+K  N+LL  +   K+ D+  +  + K                  F  
Sbjct: 147 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEK------------------FAQ 188
Query: 273 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
           T         IV T  Y APE + G   T   DI+S G +L+E+ TG
Sbjct: 189 TVMXX----RIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/233 (22%), Positives = 99/233 (42%), Gaps = 38/233 (16%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDK 155
           Y +   +G G FG+V     +  +++ A+K++     IK+   A   E   +   A    
Sbjct: 77  YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN--- 133
Query: 156 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                VQ+   F    ++ +V E + G  L + +  +NY   P    +    +++  +  
Sbjct: 134 -SPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM--SNY-DVPEKWAKFYTAEVVLALDA 189
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H + +IH D+KP+N+LL    ++K+ D+ + +          +M ++  +         
Sbjct: 190 IHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCM----------KMDETGMVHC------- 232
Query: 275 YERPDQNYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEALF 323
                 +  V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 233 ------DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 32/221 (14%)
Query: 100 KIHSKMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           K+  K+G G FG+V +  ++   K  VA+K ++      +A + E  +++ L +HDK   
Sbjct: 15  KLVKKLGAGQFGEVWMGYYNNSTK--VAVKTLKPGTMSVQAFLEEANLMKTL-QHDK--- 68
Query: 159 RCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             V++         I I+ E +   SL DFL+ +      +  + + + Q+ E +A++  
Sbjct: 69  -LVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 127
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
              IH DL+  NVL+  S   K+ D+  +    +D+ Y  R      IK           
Sbjct: 128 KNYIHRDLRAANVLVSESLMCKIADFGLA-RVIEDNEYTAREGAKFPIK----------- 175
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                      + APE I    +T   ++WS G +L E+ T
Sbjct: 176 -----------WTAPEAINFGCFTIKSNVWSFGILLYEIVT 205

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 96/233 (41%), Gaps = 39/233 (16%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR----EAAMIEIEVLQQLAKHDKGGNRC 160
           +G+G+FG+V+    +  +E+ AIKI++     +    E  M+E  VL  L K        
Sbjct: 27  LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP----PFL 82
Query: 161 VQIRNWFDYRNHICIVFEKL--GSSLYDFLRKNNYRS-FPIDLVREIARQLLECIAFMHD 217
            Q+ + F   + +  V E +  G  +Y   +   ++    +    EI+  L     F+H 
Sbjct: 83  TQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLF----FLHK 138
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
             +I+ DLK +NV+L S  +IK+ D+        D                  G TT E 
Sbjct: 139 RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMD------------------GVTTRE- 179
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                   T  Y APE+I    +    D W+ G +L E+  G+  F   +  E
Sbjct: 180 -----FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE 227

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 101/235 (42%), Gaps = 44/235 (18%)
Query: 104 KMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 162
           ++G G FG V L  W    K+ VAIK +R      E  + E EV+ +L+ H K     VQ
Sbjct: 15  EIGSGQFGLVHLGYW--LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPK----LVQ 67
Query: 163 IRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 221
           +      +  IC+V E +    L D+LR      F  + +  +   + E +A++ + C+I
Sbjct: 68  LYGVCLEQAPICLVTEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVI 126
Query: 222 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 281
           H DL   N L+                            ++  IKV DFG T +   DQ 
Sbjct: 127 HRDLAARNCLV---------------------------GENQVIKVSDFGMTRFVLDDQ- 158
Query: 282 YIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 330
           Y  ST       + +PEV     ++   D+WS G ++ E+ + G+  ++   N E
Sbjct: 159 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 213

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/228 (22%), Positives = 94/228 (41%), Gaps = 42/228 (18%)
Query: 105 MGEGTFGQVLEC----WDRERKEM-VAIKIVRGIKKY--REAAMIEIEVLQQLAKHDKGG 157
           +G G FG+V+E       +E   + VA+K+++       +EA M E++++  L +H+   
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 110
Query: 158 NRCVQIRNWFDYRNHICIVFEKLG-SSLYDFLR--------KNNYRSFPIDLVREIARQL 208
              V +     +   + ++ E      L +FLR        K + R   +  +   + Q+
Sbjct: 111 -NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 169
Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
            + +AF+     IH D+   NVLL +    K+ D+  +     DS+Y  +      +K  
Sbjct: 170 AQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-- 227
Query: 269 DFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 316
                               + APE I    +T   D+WS G +L E+
Sbjct: 228 --------------------WMAPESIFDCVYTVQSDVWSYGILLWEI 255

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/228 (22%), Positives = 94/228 (41%), Gaps = 42/228 (18%)
Query: 105 MGEGTFGQVLEC----WDRERKEM-VAIKIVRGIKKY--REAAMIEIEVLQQLAKHDKGG 157
           +G G FG+V+E       +E   + VA+K+++       +EA M E++++  L +H+   
Sbjct: 46  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 102
Query: 158 NRCVQIRNWFDYRNHICIVFEKLG-SSLYDFLR--------KNNYRSFPIDLVREIARQL 208
              V +     +   + ++ E      L +FLR        K + R   +  +   + Q+
Sbjct: 103 -NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 161
Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
            + +AF+     IH D+   NVLL +    K+ D+  +     DS+Y  +      +K  
Sbjct: 162 AQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-- 219
Query: 269 DFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 316
                               + APE I    +T   D+WS G +L E+
Sbjct: 220 --------------------WMAPESIFDCVYTVQSDVWSYGILLWEI 247

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 101/235 (42%), Gaps = 44/235 (18%)
Query: 104 KMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 162
           ++G G FG V L  W    K+ VAIK +R      E  + E EV+ +L+ H K     VQ
Sbjct: 14  EIGSGQFGLVHLGYW--LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLS-HPK----LVQ 66
Query: 163 IRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 221
           +      +  IC+VFE +    L D+LR      F  + +  +   + E +A++ +  +I
Sbjct: 67  LYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEASVI 125
Query: 222 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 281
           H DL   N L+                            ++  IKV DFG T +   DQ 
Sbjct: 126 HRDLAARNCLV---------------------------GENQVIKVSDFGMTRFVLDDQ- 157
Query: 282 YIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 330
           Y  ST       + +PEV     ++   D+WS G ++ E+ + G+  ++   N E
Sbjct: 158 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 212

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 107/245 (43%), Gaps = 45/245 (18%)
Query: 101 IHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKG 156
           +  ++G G+FG V +  W  +    VA+K++       +  +A   E+ VL++       
Sbjct: 28  VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRK------- 76
Query: 157 GNRCVQIRNWFDY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
             R V I  +  Y  +  + IV +   GSSLY  L  +  + F +  + +IARQ    + 
Sbjct: 77  -TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMD 134
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H   +IH DLK  N+ L     +K+ D+  +    + S                 GS 
Sbjct: 135 YLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS-----------------GSH 177
Query: 274 TYERPDQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
            +E+   + +     + APEVI       +++  D+++ G +L EL TG+  +    N +
Sbjct: 178 QFEQLSGSIL-----WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 232
Query: 331 HLAMM 335
            +  M
Sbjct: 233 QIIEM 237

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 37/233 (15%)
Query: 91  LGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR-GIK-KYREAAMIEIEVLQ 148
           +GE     ++  S++G G  G V +   +    ++A K++   IK   R   + E++VL 
Sbjct: 27  VGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL- 85
Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 207
               H+      V     F     I I  E + G SL   L+K      P  ++ +++  
Sbjct: 86  ----HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIA 139
Query: 208 LLECIAFMHDL-CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           +++ + ++ +   ++H D+KP N+L+ S   IK+ D+  S                   +
Sbjct: 140 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG------------------Q 181
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
           +ID  + ++        V TR Y +PE + G  ++   DIWS+G  LVE+  G
Sbjct: 182 LIDSMANSF--------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 96/235 (40%), Gaps = 47/235 (20%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQ 162
           +G G FG V E  ++      AIK +R   +   RE  M E++ L   AK +  G   V+
Sbjct: 13  LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKAL---AKLEHPG--IVR 67
Query: 163 IRNWFDYRNHICIVFEKLGSS-----LY---DFLRKNNYRSF----------PIDLVREI 204
             N +  +N      EKL  S     LY      RK N + +             +   I
Sbjct: 68  YFNAWLEKNTT----EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHI 123
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD---SSYFKRMPK 261
             Q+ E + F+H   ++H DLKP N+     + +KV D+       +D    +    MP 
Sbjct: 124 FLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP- 182
Query: 262 SSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 316
                        Y R      V T+ Y +PE I G  +++  DI+S+G IL EL
Sbjct: 183 ------------AYARHTGQ--VGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 106/245 (43%), Gaps = 45/245 (18%)
Query: 101 IHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKG 156
           +  ++G G+FG V +  W  +    VA+K++       +  +A   E+ VL++       
Sbjct: 28  VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRK------- 76
Query: 157 GNRCVQIRNWFDYRN--HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
             R V I  +  Y     + IV +   GSSLY  L  +  + F +  + +IARQ    + 
Sbjct: 77  -TRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMD 134
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H   +IH DLK  N+ L     +K+ D+  +    + S                 GS 
Sbjct: 135 YLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS-----------------GSH 177
Query: 274 TYERPDQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
            +E+   + +     + APEVI       +++  D+++ G +L EL TG+  +    N +
Sbjct: 178 QFEQLSGSIL-----WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 232
Query: 331 HLAMM 335
            +  M
Sbjct: 233 QIIEM 237

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/339 (21%), Positives = 130/339 (38%), Gaps = 79/339 (23%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKY-REAAMIEIEVLQQLAKHDKGGNRCVQI 163
           +GEG   +V  C +    +  A+KI+     + R     E+E+L Q   H       +++
Sbjct: 21  LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGH----RNVLEL 76
Query: 164 RNWFDYRNHICIVFEKL--GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 221
             +F+  +   +VFEK+  GS L    ++ ++      +V +     L+   F+H+  + 
Sbjct: 77  IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALD---FLHNKGIA 133
Query: 222 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG---------- 271
           H DLKPEN+L      +                        S +K+ DFG          
Sbjct: 134 HRDLKPENILCEHPNQV------------------------SPVKICDFGLGSGIKLNGD 169
Query: 272 STTYERPDQNYIVSTRHYRAPEVILGLG-----WTYPCDIWSVGCILVELCTGEALFQTH 326
            +    P+      +  Y APEV+         +   CD+WS+G IL  L +G   F   
Sbjct: 170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR 229
Query: 327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 386
              +          P  Q+ML        + ++ G+ ++P+   +               
Sbjct: 230 CGSD-CGWDRGEACPACQNMLF-------ESIQEGKYEFPDKDWA--------------- 266
Query: 387 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 425
               H+  +A D   L+  LL  D   RL+A + L+HP+
Sbjct: 267 ----HISCAAKD---LISKLLVRDAKQRLSAAQVLQHPW 298

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 97/227 (42%), Gaps = 43/227 (18%)
Query: 103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEI---EVLQQLAKHDKGGNR 159
           +KMGEG FG V + +       VA+K        + AAM++I   E+ QQ  +  K   +
Sbjct: 31  NKMGEGGFGVVYKGY--VNNTTVAVK--------KLAAMVDITTEELKQQFDQEIKVMAK 80
Query: 160 C-----VQIRNWFDYRNHICIVFEKL-GSSLYDFLR-KNNYRSFPIDLVREIARQLLECI 212
           C     V++  +    + +C+V+  +   SL D L   +        +  +IA+     I
Sbjct: 81  CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 140
Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
            F+H+   IH D+K  N+LL  +   K+ D+              R  +  A  V+    
Sbjct: 141 NFLHENHHIHRDIKSANILLDEAFTAKISDFG-----------LARASEKFAQXVM---- 185
Query: 273 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                     IV T  Y APE + G   T   DI+S G +L+E+ TG
Sbjct: 186 -------XXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 224

>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7 Length = 297

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 34/182 (18%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           YK+  ++GEG+FG + E  +    + VAIK         E    +   L+   +  K   
Sbjct: 11  YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKF--------EPRRSDAPQLRDEYRTYKLLA 62
Query: 159 RCVQIRNWFDYRN---HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            C  I N + +     H  +V + LG SL D L     R F +  V   A+Q+L  +  +
Sbjct: 63  GCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSI 121
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H+  +++ D+KP+N L      I  P+ K+                ++ I V+DFG   +
Sbjct: 122 HEKSLVYRDIKPDNFL------IGRPNSKN----------------ANMIYVVDFGMVKF 159
Query: 276 ER 277
            R
Sbjct: 160 YR 161

>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With 2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9- Isopropylpurine (Casp Target) Length = 310

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 100 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 159
           ++  K+G G FG++    +    E VAIK+   IK       +E    +QL    +G   
Sbjct: 3   RVGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPIKSRAPQLHLEYRFYKQLGSAGEG--- 58
Query: 160 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
             Q+  +     +  +V E LG SL D     + R+F +  V  IA QLL  + ++H   
Sbjct: 59  LPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCD-RTFTLKTVLMIAIQLLSRMEYVHSKN 117
Query: 220 MIHTDLKPENVLL 232
           +I+ D+KPEN L+
Sbjct: 118 LIYRDVKPENFLI 130

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/328 (20%), Positives = 133/328 (40%), Gaps = 58/328 (17%)
Query: 32  PKAQVGLFCGQEVGNVTSFAPPRAPSDHVTSSSLFVKGVARNGSPPWREDDKDGHYMFAL 91
           P+AQ  LFC     +  + A  RA +       L    +A  G  P++E     +++  L
Sbjct: 117 PQAQ--LFC--SFLDAETVARARAGAGDGLFQPLLRAVLAHLGQAPFQEFLDSKYFLRFL 172
Query: 92  ----------GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR---- 137
                     GE+    +++   +G G FG+V  C  +   ++ A K +   +  +    
Sbjct: 173 QWKWLEAQPMGEDWFLDFRV---LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY 229
Query: 138 EAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSS-----LYDFLRKNN 192
           + AM+E ++L ++  H +     V +   F+ +  +C+V   +        +Y+    N 
Sbjct: 230 QGAMVEKKILAKV--HSR---FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP 284
Query: 193 YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD 252
               P  +      Q++  +  +H   +I+ DLKPENVLL     +++ D   ++     
Sbjct: 285 GFQEPRAIF--YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL--- 339
Query: 253 SSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCI 312
                   K+   K   +  T               + APE++LG  + +  D +++G  
Sbjct: 340 --------KAGQTKTKGYAGTP-------------GFMAPELLLGEEYDFSVDYFALGVT 378
Query: 313 LVELCTGEALFQTH-ENLEHLAMMERVL 339
           L E+      F+   E +E+  + +RVL
Sbjct: 379 LYEMIAARGPFRARGEKVENKELKQRVL 406

>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An Atp Competitive Inhibitor, Ic261 Length = 298

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 34/182 (18%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           YK+  ++GEG+FG + E  +    + VAIK         E    +   L+   +  K   
Sbjct: 12  YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKF--------EPRRSDAPQLRDEYRTYKLLA 63
Query: 159 RCVQIRNWFDYRN---HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            C  I N + +     H  +V + LG SL D L     R F +  V   A+Q+L  +  +
Sbjct: 64  GCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSI 122
Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H+  +++ D+KP+N L      I  P+ K+                ++ I V+DFG   +
Sbjct: 123 HEKSLVYRDIKPDNFL------IGRPNSKN----------------ANMIYVVDFGMVKF 160
Query: 276 ER 277
            R
Sbjct: 161 YR 162

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 37/221 (16%)
Query: 103 SKMGEGTFGQVLECWDRERKEMVAIKIVR-GIK-KYREAAMIEIEVLQQLAKHDKGGNRC 160
           S++G G  G V +   +    ++A K++   IK   R   + E++VL     H+      
Sbjct: 12  SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECNSPYI 66
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL- 218
           V     F     I I  E + G SL   L+K      P  ++ +++  +++ + ++ +  
Sbjct: 67  VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH 124
Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
            ++H D+KP N+L+ S   IK+ D+  S                   ++ID  + ++   
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF--- 163
Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                V TR Y +PE + G  ++   DIWS+G  LVE+  G
Sbjct: 164 -----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 29/180 (16%)
Query: 172 HICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD---LCMIHTDLKP 227
           ++C+V E   G  L   L     +  P D++   A Q+   + ++HD   + +IH DLK 
Sbjct: 80  NLCLVMEFARGGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKS 136
Query: 228 ENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPDQNYIVST 286
            N+L++     KV +   S               +  +K+ DFG +  + R  +      
Sbjct: 137 SNILILQ----KVENGDLS---------------NKILKITDFGLAREWHRTTKMSAAGA 177
Query: 287 RHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL--EHLAMMERVLGPLPQ 344
             + APEVI    ++   D+WS G +L EL TGE  F+  + L   +   M ++  P+P 
Sbjct: 178 YAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPS 237

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 103/254 (40%), Gaps = 41/254 (16%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR----EAAMIEIEVLQQLAKHDKGGNRC 160
           +G+G+FG+V+    +   E+ A+KI++     +    E  M+E  VL    K        
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP----FL 404
Query: 161 VQIRNWFDYRNHICIVFEKL--GSSLYDFLRKNNYRS-FPIDLVREIARQLLECIAFMHD 217
            Q+ + F   + +  V E +  G  +Y   +   ++    +    EIA  L     F+  
Sbjct: 405 TQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLF----FLQS 460
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
             +I+ DLK +NV+L S  +IK+ D+        D                  G TT   
Sbjct: 461 KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD------------------GVTT--- 499
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-AMME 336
                   T  Y APE+I    +    D W+ G +L E+  G+A F+  +  E   ++ME
Sbjct: 500 ---KXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 556
Query: 337 RVLGPLPQHMLKRV 350
             +   P+ M K  
Sbjct: 557 HNVA-YPKSMSKEA 569

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/259 (20%), Positives = 109/259 (42%), Gaps = 44/259 (16%)
Query: 91  LGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR----EAAMIEIEV 146
           +GE+    +++   +G G FG+V  C  +   ++ A K +   +  +    + AM+E ++
Sbjct: 182 MGEDWFLDFRV---LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI 238
Query: 147 LQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSS-----LYDFLRKNNYRSFPIDLV 201
           L ++  H +     V +   F+ +  +C+V   +        +Y+    N     P  + 
Sbjct: 239 LAKV--HSR---FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 202 REIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPK 261
                Q++  +  +H   +I+ DLKPENVLL     +++ D   ++             K
Sbjct: 294 --YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-----------K 340
Query: 262 SSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 321
           +   K   +  T               + APE++LG  + +  D +++G  L E+     
Sbjct: 341 AGQTKTKGYAGTP-------------GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387
Query: 322 LFQTH-ENLEHLAMMERVL 339
            F+   E +E+  + +RVL
Sbjct: 388 PFRARGEKVENKELKQRVL 406

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/259 (20%), Positives = 109/259 (42%), Gaps = 44/259 (16%)
Query: 91  LGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR----EAAMIEIEV 146
           +GE+    +++   +G G FG+V  C  +   ++ A K +   +  +    + AM+E ++
Sbjct: 182 MGEDWFLDFRV---LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI 238
Query: 147 LQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSS-----LYDFLRKNNYRSFPIDLV 201
           L ++  H +     V +   F+ +  +C+V   +        +Y+    N     P  + 
Sbjct: 239 LAKV--HSR---FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 202 REIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPK 261
                Q++  +  +H   +I+ DLKPENVLL     +++ D   ++             K
Sbjct: 294 --YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-----------K 340
Query: 262 SSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 321
           +   K   +  T               + APE++LG  + +  D +++G  L E+     
Sbjct: 341 AGQTKTKGYAGTP-------------GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387
Query: 322 LFQTH-ENLEHLAMMERVL 339
            F+   E +E+  + +RVL
Sbjct: 388 PFRARGEKVENKELKQRVL 406

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/227 (20%), Positives = 101/227 (44%), Gaps = 35/227 (15%)
Query: 101 IHSK-MGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           IH + +G+G FGQ ++   RE  E++ +K ++R  ++ +   + E++V+           
Sbjct: 13  IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVM----------- 61
Query: 159 RCVQIRNWFDY------RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
           RC++  N   +         +  + E +       + K+    +P       A+ +   +
Sbjct: 62  RCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGM 121
Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
           A++H + +IH DL   N L+  ++ + V D+  +     +    K  P+         G 
Sbjct: 122 AYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDE----KTQPE---------GL 168
Query: 273 TTYERPDQN---YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 316
            + ++PD+     +V   ++ APE+I G  +    D++S G +L E+
Sbjct: 169 RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEI 215

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 105/252 (41%), Gaps = 42/252 (16%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRG--IKKYREAAMIEIEVLQ 148
            S  KI   +G G FG+V  C  R     +R+  VAIK ++     K R   + E  ++ 
Sbjct: 28  ASCIKIEKVIGVGEFGEV--CSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMG 85
Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 207
           Q    +      + +         + I+ E +   SL  FLRKN+ R   I LV  + R 
Sbjct: 86  QFDHPN-----IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLV-GMLRG 139
Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAI 265
           +   + ++ D+  +H DL   N+L+ S+   KV D+  S  L    +++Y  R  K    
Sbjct: 140 IGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK---- 195
Query: 266 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQ 324
                             +  R + APE I    +T   D+WS G ++ E+ + GE  + 
Sbjct: 196 ------------------IPIR-WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYW 236
Query: 325 THENLEHLAMME 336
              N + +  +E
Sbjct: 237 DMSNQDVIKAIE 248

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 37/221 (16%)
Query: 103 SKMGEGTFGQVLECWDRERKEMVAIKIVR-GIK-KYREAAMIEIEVLQQLAKHDKGGNRC 160
           S++G G  G V +   +    ++A K++   IK   R   + E++VL     H+      
Sbjct: 12  SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECNSPYI 66
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL- 218
           V     F     I I  E + G SL   L+K      P  ++ +++  +++ + ++ +  
Sbjct: 67  VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH 124
Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
            ++H D+KP N+L+ S   IK+ D+  S                   ++ID  + ++   
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF--- 163
Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                V TR Y +PE + G  ++   DIWS+G  LVE+  G
Sbjct: 164 -----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 106/257 (41%), Gaps = 58/257 (22%)
Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKG 156
             Y++   +G+G F +V              K+ R I   +E A+  I+  Q  +   + 
Sbjct: 7   GNYRLLKTIGKGNFAKV--------------KLARHILTGKEVAVKIIDKTQLNSSSLQK 52
Query: 157 GNRCVQIRNWFDYRNHICIVFEKL--------------GSSLYDFLRKNNYRSFPIDLVR 202
             R V+I    ++ N I  +FE +              G  ++D+L  + +        R
Sbjct: 53  LFREVRIMKVLNHPN-IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGW--MKEKEAR 109
Query: 203 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 262
              RQ++  + + H   ++H DLK EN+LL +   IK+ D+  S     + ++  ++   
Sbjct: 110 AKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDTF 165
Query: 263 SAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL 322
                   GS  Y  P+   +   + Y  PEV          D+WS+G IL  L +G   
Sbjct: 166 C-------GSPPYAAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLP 205
Query: 323 FQTHENLEHLAMMERVL 339
           F   +NL+ L   ERVL
Sbjct: 206 FDG-QNLKELR--ERVL 219

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 37/221 (16%)
Query: 103 SKMGEGTFGQVLECWDRERKEMVAIKIVR-GIK-KYREAAMIEIEVLQQLAKHDKGGNRC 160
           S++G G  G V +   +    ++A K++   IK   R   + E++VL     H+      
Sbjct: 12  SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECNSPYI 66
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL- 218
           V     F     I I  E + G SL   L+K      P  ++ +++  +++ + ++ +  
Sbjct: 67  VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH 124
Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
            ++H D+KP N+L+ S   IK+ D+  S                   ++ID  + ++   
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF--- 163
Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                V TR Y +PE + G  ++   DIWS+G  LVE+  G
Sbjct: 164 -----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 37/233 (15%)
Query: 91  LGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR-GIK-KYREAAMIEIEVLQ 148
           +GE     ++  S++G G  G V +   +    ++A K++   IK   R   + E++VL 
Sbjct: 19  VGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL- 77
Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 207
               H+      V     F     I I  E + G SL   L+K      P  ++ +++  
Sbjct: 78  ----HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIA 131
Query: 208 LLECIAFMHDL-CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           +++ + ++ +   ++H D+KP N+L+ S   IK+ D+  S                   +
Sbjct: 132 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG------------------Q 173
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
           +ID  + ++        V TR Y +PE + G  ++   DIWS+G  LVE+  G
Sbjct: 174 LIDSMANSF--------VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 218

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 79/334 (23%), Positives = 132/334 (39%), Gaps = 69/334 (20%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKY-REAAMIEIEVLQQLAKHDKGGNRCVQI 163
           +GEG   +V  C +    +  A+KI+     + R     E+E+L Q   H       +++
Sbjct: 21  LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGH----RNVLEL 76
Query: 164 RNWFDYRNHICIVFEKL--GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 221
             +F+  +   +VFEK+  GS L    ++ ++      +V +     L+   F+H+  + 
Sbjct: 77  IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALD---FLHNKGIA 133
Query: 222 HTDLKPENVLL-----VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 276
           H DLKPEN+L      VS   I   D  S +    D S     P S+   +   GS    
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS-----PISTPELLTPCGSA--- 185
Query: 277 RPDQNYIVSTRHYRAPEVILGLG-----WTYPCDIWSVGCILVELCTGEALFQTHENLEH 331
                       Y APEV+         +   CD+WS+G IL  L +G   F      + 
Sbjct: 186 -----------EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD- 233
Query: 332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH 391
                    P  Q+ML        + ++ G+ ++P+   +                   H
Sbjct: 234 CGWDRGEACPACQNMLF-------ESIQEGKYEFPDKDWA-------------------H 267
Query: 392 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 425
           +  +A D   L+  LL  D   RL+A + L+HP+
Sbjct: 268 ISCAAKD---LISKLLVRDAKQRLSAAQVLQHPW 298

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 27/134 (20%)
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 265
           RQ++  + + H   ++H DLK EN+LL +   IK+ D+  S     + ++  ++ +    
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDEFC-- 173
Query: 266 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 325
                GS  Y  P+   +   + Y  PEV          D+WS+G IL  L +G   F  
Sbjct: 174 -----GSPPYAAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG 215
Query: 326 HENLEHLAMMERVL 339
            +NL+ L   ERVL
Sbjct: 216 -QNLKELR--ERVL 226

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 103/254 (40%), Gaps = 41/254 (16%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR----EAAMIEIEVLQQLAKHDKGGNRC 160
           +G+G+FG+V+    +   E+ A+KI++     +    E  M+E  VL    K        
Sbjct: 28  LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP----FL 83
Query: 161 VQIRNWFDYRNHICIVFEKL--GSSLYDFLRKNNYRS-FPIDLVREIARQLLECIAFMHD 217
            Q+ + F   + +  V E +  G  +Y   +   ++    +    EIA  L     F+  
Sbjct: 84  TQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLF----FLQS 139
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
             +I+ DLK +NV+L S  +IK+ D+        D                  G TT   
Sbjct: 140 KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD------------------GVTT--- 178
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL-AMME 336
                   T  Y APE+I    +    D W+ G +L E+  G+A F+  +  E   ++ME
Sbjct: 179 ---KXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 235
Query: 337 RVLGPLPQHMLKRV 350
             +   P+ M K  
Sbjct: 236 HNVA-YPKSMSKEA 248

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 107/245 (43%), Gaps = 45/245 (18%)
Query: 101 IHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKG 156
           +  ++G G+FG V +  W  +    VA+K++       +  +A   E+ VL++       
Sbjct: 40  VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRK------- 88
Query: 157 GNRCVQIRNWFDY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
             R V I  +  Y  +  + IV +   GSSLY  L     +   I L+ +IARQ  + + 
Sbjct: 89  -TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMD 146
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H   +IH DLK  N+ L     +K+ D+  +    + S                 GS 
Sbjct: 147 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS-----------------GSH 189
Query: 274 TYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLE 330
            +E+   + +     + APEVI       +++  D+++ G +L EL TG+  +    N +
Sbjct: 190 QFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 244
Query: 331 HLAMM 335
            +  M
Sbjct: 245 QIIFM 249

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 97/237 (40%), Gaps = 47/237 (19%)
Query: 105 MGEGTFGQVLEC----WDRERKEM-VAIKIVRGIKKY--REAAMIEIEVLQQLAKHDK-- 155
           +G G FG+V+E       +E   + VA+K+++       +EA M E++++  L +H+   
Sbjct: 39  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 156 -------GGNRCVQIRNWFDYRNHICIVFEK----LGSSLY-----DFLRKNNYRSFPID 199
                   G   + I  +  Y + +  +  K    LG SL      + L K + R   + 
Sbjct: 99  NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 200 LVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM 259
            +   + Q+ + +AF+     IH D+   NVLL +    K+ D+  +     DS+Y  + 
Sbjct: 159 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 218
Query: 260 PKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 316
                +K                      + APE I    +T   D+WS G +L E+
Sbjct: 219 NARLPVK----------------------WMAPESIFDCVYTVQSDVWSYGILLWEI 253

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/217 (21%), Positives = 94/217 (43%), Gaps = 26/217 (11%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           ++G G +G V +       +++A+K +R     +E   + +++   ++         V  
Sbjct: 58  ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDL--DISMRTVDCPFTVTF 115
Query: 164 RNWFDYRNHICIVFEKLGSSLYDFLRK--NNYRSFPIDLVREIARQLLECIAFMHD-LCM 220
                    + I  E + +SL  F ++  +  ++ P D++ +IA  +++ +  +H  L +
Sbjct: 116 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 175
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 280
           IH D+KP NVL+ +   +K+ D+  S +              S  K ID G   Y  P+ 
Sbjct: 176 IHRDVKPSNVLINALGQVKMCDFGISGYL-----------VDSVAKTIDAGCKPYMAPE- 223
Query: 281 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 317
                    R    +   G++   DIWS+G  ++EL 
Sbjct: 224 ---------RINPELNQKGYSVKSDIWSLGITMIELA 251

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 107/245 (43%), Gaps = 45/245 (18%)
Query: 101 IHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKG 156
           +  ++G G+FG V +  W  +    VA+K++       +  +A   E+ VL++       
Sbjct: 16  VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRK------- 64
Query: 157 GNRCVQIRNWFDY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
             R V I  +  Y  +  + IV +   GSSLY  L  +  + F +  + +IARQ    + 
Sbjct: 65  -TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMD 122
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H   +IH DLK  N+ L     +K+ D+                   + +K    GS 
Sbjct: 123 YLHAKSIIHRDLKSNNIFLHEDNTVKIGDF-----------------GLATVKSRWSGSH 165
Query: 274 TYERPDQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
            +E+   + +     + APEVI       +++  D+++ G +L EL TG+  +    N +
Sbjct: 166 QFEQLSGSIL-----WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 220
Query: 331 HLAMM 335
            +  M
Sbjct: 221 QIIEM 225

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 94/233 (40%), Gaps = 48/233 (20%)
Query: 105 MGEGTFGQVLEC----WDRERKEM-VAIKIVRGIKKY--REAAMIEIEVLQQLAKHDKGG 157
           +G G FG+V+E       +E   + VA+K+++       +EA M E++++  L +H+   
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 110
Query: 158 NRCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIAR---------- 206
              V +     +   + ++ E      L +FLR+ + R    D    IA           
Sbjct: 111 -NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS-RVLETDPAFAIANSTASTRDLLH 168
Query: 207 ---QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSS 263
              Q+ + +AF+     IH D+   NVLL +    K+ D+  +     DS+Y  +     
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 264 AIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 316
            +K                      + APE I    +T   D+WS G +L E+
Sbjct: 229 PVK----------------------WMAPESIFDCVYTVQSDVWSYGILLWEI 259

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 102/239 (42%), Gaps = 32/239 (13%)
Query: 104 KMGEGTFGQVLECWDRERKEM--VAIKIVR-GIKKY-REAAMIEIEVLQQLAKHDKGGNR 159
           ++G G FG V +   R RK+   VAIK+++ G +K   E  M E +++ QL         
Sbjct: 17  ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-----DNPY 71
Query: 160 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
            V++         + ++    G  L+ FL        P+  V E+  Q+   + ++ +  
Sbjct: 72  IVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKN 130
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
            +H DL   NVLLV+  Y K+ D+  S     D SY+                +  + P 
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT-------------ARSAGKWPL 177
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLAMMER 337
           + Y        APE I    ++   D+WS G  + E L  G+  ++  +  E +A +E+
Sbjct: 178 KWY--------APECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 228

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 94/233 (40%), Gaps = 48/233 (20%)
Query: 105 MGEGTFGQVLEC----WDRERKEM-VAIKIVRGIKKY--REAAMIEIEVLQQLAKHDKGG 157
           +G G FG+V+E       +E   + VA+K+++       +EA M E++++  L +H+   
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 110
Query: 158 NRCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIAR---------- 206
              V +     +   + ++ E      L +FLR+ + R    D    IA           
Sbjct: 111 -NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS-RVLETDPAFAIANSTLSTRDLLH 168
Query: 207 ---QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSS 263
              Q+ + +AF+     IH D+   NVLL +    K+ D+  +     DS+Y  +     
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 264 AIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 316
            +K                      + APE I    +T   D+WS G +L E+
Sbjct: 229 PVK----------------------WMAPESIFDCVYTVQSDVWSYGILLWEI 259

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 22/115 (19%)
Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+ E + F+H   ++H DLKP N+     + +KV D+   L T  D              
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDF--GLVTAMDQ------------- 216
Query: 267 VIDFGSTTYERPDQNYI-----VSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 316
             D    T   P   Y      V T+ Y +PE I G  +++  DI+S+G IL EL
Sbjct: 217 --DEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/259 (20%), Positives = 109/259 (42%), Gaps = 44/259 (16%)
Query: 91  LGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR----EAAMIEIEV 146
           +GE+    +++   +G G FG+V  C  +   ++ A K +   +  +    + AM+E ++
Sbjct: 182 MGEDWFLDFRV---LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI 238
Query: 147 LQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSS-----LYDFLRKNNYRSFPIDLV 201
           L ++  H +     V +   F+ +  +C+V   +        +Y+    N     P  + 
Sbjct: 239 LAKV--HSR---FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 202 REIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPK 261
                Q++  +  +H   +I+ DLKPENVLL     +++ D   ++             K
Sbjct: 294 --YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-----------K 340
Query: 262 SSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 321
           +   K   +  T               + APE++LG  + +  D +++G  L E+     
Sbjct: 341 AGQTKTKGYAGTP-------------GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387
Query: 322 LFQTH-ENLEHLAMMERVL 339
            F+   E +E+  + +RVL
Sbjct: 388 PFRARGEKVENKELKQRVL 406

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 61/134 (45%), Gaps = 27/134 (20%)
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 265
           RQ++  + + H   ++H DLK EN+LL +   IK+ D+         S+ F    K  A 
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGF-------SNEFTFGNKLDAF 172
Query: 266 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 325
                G+  Y  P+   +   + Y  PEV          D+WS+G IL  L +G   F  
Sbjct: 173 ----CGAPPYAAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG 215
Query: 326 HENLEHLAMMERVL 339
            +NL+ L   ERVL
Sbjct: 216 -QNLKEL--RERVL 226

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 100 KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 154
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 20  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 78
Query: 155 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
                 V+ +   +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + 
Sbjct: 79  N----IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKG 133
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 270
           + ++     IH DL   N+L+ +   +K+ D+  +   P+D    K + P  S I     
Sbjct: 134 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----- 188
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                             + APE +    ++   D+WS G +L EL T
Sbjct: 189 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 219

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 100 KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 154
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 18  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 76
Query: 155 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
                 V+ +   +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + 
Sbjct: 77  N----IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKG 131
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 270
           + ++     IH DL   N+L+ +   +K+ D+  +   P+D    K + P  S I     
Sbjct: 132 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----- 186
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                             + APE +    ++   D+WS G +L EL T
Sbjct: 187 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 217

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 100 KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 154
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 31  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 89
Query: 155 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
                 V+ +   +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + 
Sbjct: 90  N----IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKG 144
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 270
           + ++     IH DL   N+L+ +   +K+ D+  +   P+D    K + P  S I     
Sbjct: 145 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----- 199
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                             + APE +    ++   D+WS G +L EL T
Sbjct: 200 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 230

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 105/252 (41%), Gaps = 42/252 (16%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRG--IKKYREAAMIEIEVLQ 148
            S  KI   +G G FG+V  C  R     +R+  VAIK ++     K R   + E  ++ 
Sbjct: 13  ASCIKIEKVIGVGEFGEV--CSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMG 70
Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 207
           Q    +      + +         + I+ E +   SL  FLRKN+ R   I LV  + R 
Sbjct: 71  QFDHPN-----IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLV-GMLRG 124
Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAI 265
           +   + ++ D+  +H DL   N+L+ S+   KV D+  S  L    +++Y  R  K    
Sbjct: 125 IGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK---- 180
Query: 266 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQ 324
                             +  R + APE I    +T   D+WS G ++ E+ + GE  + 
Sbjct: 181 ------------------IPIR-WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYW 221
Query: 325 THENLEHLAMME 336
              N + +  +E
Sbjct: 222 DMSNQDVIKAIE 233

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 37/221 (16%)
Query: 103 SKMGEGTFGQVLECWDRERKEMVAIKIVR-GIK-KYREAAMIEIEVLQQLAKHDKGGNRC 160
           S++G G  G V +   +    ++A K++   IK   R   + E++VL     H+      
Sbjct: 12  SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECNSPYI 66
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL- 218
           V     F     I I  E + G SL   L+K      P  ++ +++  +++ + ++ +  
Sbjct: 67  VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH 124
Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
            ++H D+KP N+L+ S   IK+ D+  S                   ++ID  + ++   
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF--- 163
Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                V TR Y +PE + G  ++   DIWS+G  LVE+  G
Sbjct: 164 -----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 37/221 (16%)
Query: 103 SKMGEGTFGQVLECWDRERKEMVAIKIVR-GIK-KYREAAMIEIEVLQQLAKHDKGGNRC 160
           S++G G  G V +   +    ++A K++   IK   R   + E++VL     H+      
Sbjct: 12  SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECNSPYI 66
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL- 218
           V     F     I I  E + G SL   L+K      P  ++ +++  +++ + ++ +  
Sbjct: 67  VGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH 124
Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
            ++H D+KP N+L+ S   IK+ D+  S                   ++ID  + ++   
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSG------------------QLIDSMANSF--- 163
Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                V TR Y +PE + G  ++   DIWS+G  LVE+  G
Sbjct: 164 -----VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 100 KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 154
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 44  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 102
Query: 155 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
                 V+ +   +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + 
Sbjct: 103 N----IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKG 157
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 270
           + ++     IH DL   N+L+ +   +K+ D+  +   P+D    K + P  S I     
Sbjct: 158 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----- 212
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                             + APE +    ++   D+WS G +L EL T
Sbjct: 213 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 243

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 100 KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 154
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 17  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 75
Query: 155 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
                 V+ +   +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + 
Sbjct: 76  N----IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKG 130
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 270
           + ++     IH DL   N+L+ +   +K+ D+  +   P+D    K + P  S I     
Sbjct: 131 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----- 185
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                             + APE +    ++   D+WS G +L EL T
Sbjct: 186 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 216

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 100 KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 154
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 16  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 74
Query: 155 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
                 V+ +   +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + 
Sbjct: 75  N----IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKG 129
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 270
           + ++     IH DL   N+L+ +   +K+ D+  +   P+D    K + P  S I     
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----- 184
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                             + APE +    ++   D+WS G +L EL T
Sbjct: 185 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 107/245 (43%), Gaps = 45/245 (18%)
Query: 101 IHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKG 156
           +  ++G G+FG V +  W  +    VA+K++       +  +A   E+ VL++       
Sbjct: 32  VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRK------- 80
Query: 157 GNRCVQIRNWFDY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
             R V I  +  Y  +  + IV +   GSSLY  L     +   I L+ +IARQ  + + 
Sbjct: 81  -TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMD 138
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H   +IH DLK  N+ L     +K+ D+  +    + S                 GS 
Sbjct: 139 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS-----------------GSH 181
Query: 274 TYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLE 330
            +E+   + +     + APEVI       +++  D+++ G +L EL TG+  +    N +
Sbjct: 182 QFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 236
Query: 331 HLAMM 335
            +  M
Sbjct: 237 QIIFM 241

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 100 KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 154
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 19  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 77
Query: 155 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
                 V+ +   +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + 
Sbjct: 78  N----IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKG 132
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 270
           + ++     IH DL   N+L+ +   +K+ D+  +   P+D    K + P  S I     
Sbjct: 133 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----- 187
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                             + APE +    ++   D+WS G +L EL T
Sbjct: 188 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 218

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 27/134 (20%)
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 265
           RQ++  + + H   ++H DLK EN+LL +   IK+ D+  S     + ++  ++      
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDTFC-- 173
Query: 266 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 325
                GS  Y  P+   +   + Y  PEV          D+WS+G IL  L +G   F  
Sbjct: 174 -----GSPPYAAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG 215
Query: 326 HENLEHLAMMERVL 339
            +NL+ L   ERVL
Sbjct: 216 -QNLKELR--ERVL 226

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 102/239 (42%), Gaps = 32/239 (13%)
Query: 104 KMGEGTFGQVLECWDRERKEM--VAIKIVR-GIKKY-REAAMIEIEVLQQLAKHDKGGNR 159
           ++G G FG V +   R RK+   VAIK+++ G +K   E  M E +++ QL         
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-----DNPY 397
Query: 160 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
            V++         + ++    G  L+ FL        P+  V E+  Q+   + ++ +  
Sbjct: 398 IVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKN 456
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
            +H +L   NVLLV+  Y K+ D+  S     D SY+                +  + P 
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT-------------ARSAGKWPL 503
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLAMMER 337
           + Y        APE I    ++   D+WS G  + E L  G+  ++  +  E +A +E+
Sbjct: 504 KWY--------APECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 554

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 27/134 (20%)
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 265
           RQ++  + + H   ++H DLK EN+LL +   IK+ D+  S     + ++  ++      
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDTFC-- 173
Query: 266 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 325
                GS  Y  P+   +   + Y  PEV          D+WS+G IL  L +G   F  
Sbjct: 174 -----GSPPYAAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG 215
Query: 326 HENLEHLAMMERVL 339
            +NL+ L   ERVL
Sbjct: 216 -QNLKELR--ERVL 226

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 27/134 (20%)
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 265
           RQ++  + + H   ++H DLK EN+LL +   IK+ D+  S     + ++  ++      
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDTFC-- 173
Query: 266 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 325
                GS  Y  P+   +   + Y  PEV          D+WS+G IL  L +G   F  
Sbjct: 174 -----GSPPYAAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG 215
Query: 326 HENLEHLAMMERVL 339
            +NL+ L   ERVL
Sbjct: 216 -QNLKELR--ERVL 226

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 100 KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 154
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 13  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 71
Query: 155 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
                 V+ +   +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + 
Sbjct: 72  N----IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKG 126
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 270
           + ++     IH DL   N+L+ +   +K+ D+  +   P+D    K + P  S I     
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----- 181
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                             + APE +    ++   D+WS G +L EL T
Sbjct: 182 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 100 KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 154
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 31  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 89
Query: 155 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
                 V+ +   +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + 
Sbjct: 90  N----IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKG 144
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 270
           + ++     IH DL   N+L+ +   +K+ D+  +   P+D    K + P  S I     
Sbjct: 145 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----- 199
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                             + APE +    ++   D+WS G +L EL T
Sbjct: 200 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 230

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/232 (21%), Positives = 93/232 (40%), Gaps = 32/232 (13%)
Query: 103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR--C 160
           S++G G++G+V +   +E   + A+K  R +  +R         L ++  H+K G    C
Sbjct: 63  SRLGHGSYGEVFKVRSKEDGRLYAVK--RSMSPFR-GPKDRARKLAEVGSHEKVGQHPCC 119
Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           V++   ++    + +  E  G SL          S P   V    R  L  +A +H   +
Sbjct: 120 VRLEQAWEEGGILYLQTELCGPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQGL 178
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 280
           +H D+KP N+ L      K+ D+                     +++   G+   +  D 
Sbjct: 179 VHLDVKPANIFLGPRGRCKLGDF------------------GLLVELGTAGAGEVQEGDP 220
Query: 281 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 332
            Y+       APE++ G  +    D++S+G  ++E+     L    E  + L
Sbjct: 221 RYM-------APELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQL 264

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 100 KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 154
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 13  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 71
Query: 155 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
                 V+ +   +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + 
Sbjct: 72  N----IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKG 126
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 270
           + ++     IH DL   N+L+ +   +K+ D+  +   P+D    K + P  S I     
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----- 181
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                             + APE +    ++   D+WS G +L EL T
Sbjct: 182 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 105/252 (41%), Gaps = 42/252 (16%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRG--IKKYREAAMIEIEVLQ 148
            S  KI   +G G FG+V  C  R     +R+  VAIK ++     K R   + E  ++ 
Sbjct: 7   ASCIKIEKVIGVGEFGEV--CSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMG 64
Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 207
           Q    +      + +         + I+ E +   SL  FLRKN+ R   I LV  + R 
Sbjct: 65  QFDHPN-----IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLV-GMLRG 118
Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAI 265
           +   + ++ D+  +H DL   N+L+ S+   KV D+  S  L    +++Y  R  K    
Sbjct: 119 IGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK---- 174
Query: 266 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQ 324
                             +  R + APE I    +T   D+WS G ++ E+ + GE  + 
Sbjct: 175 ------------------IPIR-WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYW 215
Query: 325 THENLEHLAMME 336
              N + +  +E
Sbjct: 216 DMSNQDVIKAIE 227

>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2 Length = 313

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 6/139 (4%)
Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKH 153
           ++   +++  K+G G FG++    +    E VAIK+   IK       +E    +QL+  
Sbjct: 1   SMGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPIKSRAPQLHLEYRFYKQLSAT 59
Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
           +       Q+  +     +  +V E LG SL D     + R+F +  V  IA QL+  + 
Sbjct: 60  EG----VPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCD-RTFTLKTVLMIAIQLITRME 114
Query: 214 FMHDLCMIHTDLKPENVLL 232
           ++H   +I+ D+KPEN L+
Sbjct: 115 YVHTKSLIYRDVKPENFLV 133

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 100 KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 154
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 11  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 69
Query: 155 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
                 V+ +   +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + 
Sbjct: 70  N----IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKG 124
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 270
           + ++     IH DL   N+L+ +   +K+ D+  +   P+D    K + P  S I     
Sbjct: 125 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----- 179
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                             + APE +    ++   D+WS G +L EL T
Sbjct: 180 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 210

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 100 KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 154
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 12  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 70
Query: 155 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
                 V+ +   +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + 
Sbjct: 71  N----IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKG 125
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 270
           + ++     IH DL   N+L+ +   +K+ D+  +   P+D    K + P  S I     
Sbjct: 126 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----- 180
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                             + APE +    ++   D+WS G +L EL T
Sbjct: 181 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 211

>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567 Length = 296

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 103/241 (42%), Gaps = 42/241 (17%)
Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD 154
           + ++Y++  K+G G+FG +    +    E VAIK+     +  +    ++ +  +  K  
Sbjct: 7   VGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKL-----ECVKTKHPQLHIESKFYKMM 61
Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
           +GG     I+      ++  +V E LG SL D     + R F +  V  +A Q++  I +
Sbjct: 62  QGGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEY 120
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 271
           +H    IH D+KP+N L+   +                        K + + +IDFG   
Sbjct: 121 IHSKNFIHRDVKPDNFLMGLGK------------------------KGNLVYIIDFGLAK 156
Query: 272 ----STTYE----RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 323
               + T++    R ++N +  T  Y +    LG+  +   D+ S+G +L+    G   +
Sbjct: 157 KYRDARTHQHIPYRENKN-LTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 215
Query: 324 Q 324
           Q
Sbjct: 216 Q 216

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 61/134 (45%), Gaps = 27/134 (20%)
Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 265
           RQ++  + + H   ++H DLK EN+LL +   IK+ D+         S+ F    K  A 
Sbjct: 120 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGF-------SNEFTFGNKLDAF 172
Query: 266 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 325
                G+  Y  P+   +   + Y  PEV          D+WS+G IL  L +G   F  
Sbjct: 173 ----CGAPPYAAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFDG 215
Query: 326 HENLEHLAMMERVL 339
            +NL+ L   ERVL
Sbjct: 216 -QNLKELR--ERVL 226

>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1 Length = 330

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           +++  K+G G FG++    +    E VAIK+   +K       +E    +QL      G+
Sbjct: 11  FRVGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPMKSRAPQLHLEYRFYKQLGS----GD 65
Query: 159 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 218
              Q+  +     +  +V E LG SL D     + R+F +  V  IA QL+  + ++H  
Sbjct: 66  GIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVHSK 124
Query: 219 CMIHTDLKPENVLL 232
            +I+ D+KPEN L+
Sbjct: 125 NLIYRDVKPENFLI 138

>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With Inhibitor Length = 330

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           +++  K+G G FG++    +    E VAIK+   +K       +E    +QL      G+
Sbjct: 11  FRVGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPMKSRAPQLHLEYRFYKQLG----SGD 65
Query: 159 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 218
              Q+  +     +  +V E LG SL D     + R+F +  V  IA QL+  + ++H  
Sbjct: 66  GIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVHSK 124
Query: 219 CMIHTDLKPENVLL 232
            +I+ D+KPEN L+
Sbjct: 125 NLIYRDVKPENFLI 138

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 102/258 (39%), Gaps = 60/258 (23%)
Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKG 156
             Y++   +G+G F +V              K+ R +   RE A+  I+  Q      + 
Sbjct: 15  GNYRLQKTIGKGNFAKV--------------KLARHVLTGREVAVKIIDKTQLNPTSLQK 60
Query: 157 GNRCVQIRNWFDYRNHICIVFEKL--------------GSSLYDFLRKNNYRSFPIDLVR 202
             R V+I    ++ N I  +FE +              G  ++D+L  +          R
Sbjct: 61  LFREVRIMKILNHPN-IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG--RMKEKEAR 117
Query: 203 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 262
              RQ++  + + H   ++H DLK EN+LL     IK+ D+  S               +
Sbjct: 118 AKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEF------------T 165
Query: 263 SAIKVIDF-GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 321
              K+  F GS  Y  P+   +   + Y  PEV          D+WS+G IL  L +G  
Sbjct: 166 VGNKLDTFCGSPPYAAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSL 212
Query: 322 LFQTHENLEHLAMMERVL 339
            F   +NL+ L   ERVL
Sbjct: 213 PFDG-QNLKELR--ERVL 227

>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3 Length = 351

Iteration: 1
 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           +++  K+G G FG++    +    E VAIK+   +K       +E    +QL      G+
Sbjct: 32  FRVGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPMKSRAPQLHLEYRFYKQLGS----GD 86
Query: 159 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 218
              Q+  +     +  +V E LG SL D     + R+F +  V  IA QL+  + ++H  
Sbjct: 87  GIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVHSK 145
Query: 219 CMIHTDLKPENVLL 232
            +I+ D+KPEN L+
Sbjct: 146 NLIYRDVKPENFLI 159

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 54/243 (22%), Positives = 105/243 (43%), Gaps = 44/243 (18%)
Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRE---RKEMVAIKIVRGIKKYREAAMI--EIEVLQQ 149
           L  +Y +   +GEG++G+V E  D E   R+ +  +K  +  +     A +  EI++L++
Sbjct: 3   LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRR 62
Query: 150 LAKHDKGGNRCVQIRN--WFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQ 207
           L +H       +Q+ +  + + +  + +V E     + + L     + FP+        Q
Sbjct: 63  L-RH----KNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQ 117
Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           L++ + ++H   ++H D+KP N+LL +   +K+                      SA+ V
Sbjct: 118 LIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKI----------------------SALGV 155
Query: 268 ID----FGSTTYERPDQNYIVSTRHYRAPEVILGLGW--TYPCDIWSVGCILVELCTGEA 321
            +    F +    R  Q     +  ++ PE+  GL     +  DIWS G  L  + TG  
Sbjct: 156 AEALHPFAADDTCRTSQG----SPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLY 211
Query: 322 LFQ 324
            F+
Sbjct: 212 PFE 214

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 96/243 (39%), Gaps = 51/243 (20%)
Query: 98  RYKIHSKMGEGTFGQVLEC----WDRERK-EMVAIKIVRGIKKYRE--AAMIEIEVLQQL 150
           R K+   +G G FGQV+E      D+      VA+K+++    + E  A M E+++L  +
Sbjct: 30  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 89
Query: 151 AKHDKGGN---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNN-----YRSFPIDLVR 202
             H    N    C +          + + F K G+ L  +LR        Y+  P DL +
Sbjct: 90  GHHLNVVNLLGACTKPGGPL----MVIVEFCKFGN-LSTYLRSKRNEFVPYKEAPEDLYK 144
Query: 203 EI---------ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS 253
           +          + Q+ + + F+     IH DL   N+LL     +K+ D+  +    KD 
Sbjct: 145 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 204
Query: 254 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 313
            Y ++      +K                      + APE I    +T   D+WS G +L
Sbjct: 205 DYVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLL 242
Query: 314 VEL 316
            E+
Sbjct: 243 WEI 245

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 107/245 (43%), Gaps = 45/245 (18%)
Query: 101 IHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKG 156
           +  ++G G+FG V +  W  +    VA+K++       +  +A   E+ VL++       
Sbjct: 12  VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRK------- 60
Query: 157 GNRCVQIRNWFDY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
             R V I  +  Y  +  + IV +   GSSLY  L     +   I L+ +IARQ  + + 
Sbjct: 61  -TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMD 118
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H   +IH DLK  N+ L     +K+ D+  +    + S                 GS 
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS-----------------GSH 161
Query: 274 TYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLE 330
            +E+   + +     + APEVI       +++  D+++ G +L EL TG+  +    N +
Sbjct: 162 QFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 216
Query: 331 HLAMM 335
            +  M
Sbjct: 217 QIIFM 221

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 107/245 (43%), Gaps = 45/245 (18%)
Query: 101 IHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKG 156
           +  ++G G+FG V +  W  +    VA+K++       +  +A   E+ VL++       
Sbjct: 39  VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRK------- 87
Query: 157 GNRCVQIRNWFDY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
             R V I  +  Y  +  + IV +   GSSLY  L     +   I L+ +IARQ  + + 
Sbjct: 88  -TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMD 145
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H   +IH DLK  N+ L     +K+ D+                   + +K    GS 
Sbjct: 146 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDF-----------------GLATVKSRWSGSH 188
Query: 274 TYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLE 330
            +E+   + +     + APEVI       +++  D+++ G +L EL TG+  +    N +
Sbjct: 189 QFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 243
Query: 331 HLAMM 335
            +  M
Sbjct: 244 QIIFM 248

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/217 (21%), Positives = 95/217 (43%), Gaps = 26/217 (11%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           ++G G +G V +       +++A+K +R     +E   + +++   ++         V  
Sbjct: 14  ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDL--DISMRTVDCPFTVTF 71
Query: 164 RNWFDYRNHICIVFEKLGSSLYDFLRK--NNYRSFPIDLVREIARQLLECIAFMHD-LCM 220
                    + I  E + +SL  F ++  +  ++ P D++ +IA  +++ +  +H  L +
Sbjct: 72  YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 131
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 280
           IH D+KP NVL+ +   +K+ D+  S +   D +           K ID G   Y  P+ 
Sbjct: 132 IHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA-----------KDIDAGCKPYMAPE- 179
Query: 281 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 317
                    R    +   G++   DIWS+G  ++EL 
Sbjct: 180 ---------RINPELNQKGYSVKSDIWSLGITMIELA 207

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 107/245 (43%), Gaps = 45/245 (18%)
Query: 101 IHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKG 156
           +  ++G G+FG V +  W  +    VA+K++       +  +A   E+ VL++       
Sbjct: 40  VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRK------- 88
Query: 157 GNRCVQIRNWFDY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
             R V I  +  Y  +  + IV +   GSSLY  L     +   I L+ +IARQ  + + 
Sbjct: 89  -TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMD 146
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H   +IH DLK  N+ L     +K+ D+                   + +K    GS 
Sbjct: 147 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDF-----------------GLATVKSRWSGSH 189
Query: 274 TYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLE 330
            +E+   + +     + APEVI       +++  D+++ G +L EL TG+  +    N +
Sbjct: 190 QFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 244
Query: 331 HLAMM 335
            +  M
Sbjct: 245 QIIFM 249

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 24/99 (24%)
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           ++H DLKP NV L   + +K+ D+  +     D+S+ K                      
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT--------------------- 175
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
               V T +Y +PE +  + +    DIWS+GC+L ELC 
Sbjct: 176 ---FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 34/133 (25%)
Query: 200 LVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM 259
           L+  I RQ+   + ++H+  + H D+KPEN L  ++                        
Sbjct: 169 LISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTN------------------------ 204
Query: 260 PKSSAIKVIDFGSTT--YERPDQNYI-----VSTRHYRAPEVILGLGWTY--PCDIWSVG 310
            KS  IK++DFG +   Y+  +  Y        T ++ APEV+     +Y   CD WS G
Sbjct: 205 -KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAG 263
Query: 311 CILVELCTGEALF 323
            +L  L  G   F
Sbjct: 264 VLLHLLLMGAVPF 276

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 24/99 (24%)
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           ++H DLKP NV L   + +K+ D+  +     D+S+ K                      
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKA--------------------- 175
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
               V T +Y +PE +  + +    DIWS+GC+L ELC 
Sbjct: 176 ---FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/225 (22%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCV 161
           ++G G +G V +   +   +++A+K +R    +K ++  +++++V+ +        + C 
Sbjct: 29  EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMR-------SSDCP 81
Query: 162 QIRNWFD--YRNHICIVFEKLGSSLYDFLRKNNYRSF----PIDLVREIARQLLECIAFM 215
            I  ++   +R   C +  +L S+ +D   K  Y       P +++ +I    ++ +  +
Sbjct: 82  YIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHL 141
Query: 216 -HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
             +L +IH D+KP N+LL  S  IK+ D+  S                S  K  D G   
Sbjct: 142 KENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL-----------VDSIAKTRDAGCRP 190
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
           Y  P++    ++R           G+    D+WS+G  L EL TG
Sbjct: 191 YMAPERIDPSASRQ----------GYDVRSDVWSLGITLYELATG 225

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 96/243 (39%), Gaps = 51/243 (20%)
Query: 98  RYKIHSKMGEGTFGQVLEC----WDRERK-EMVAIKIVRGIKKYRE--AAMIEIEVLQQL 150
           R K+   +G G FGQV+E      D+      VA+K+++    + E  A M E+++L  +
Sbjct: 65  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 124
Query: 151 AKHDKGGN---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNN-----YRSFPIDLVR 202
             H    N    C +          + + F K G+ L  +LR        Y+  P DL +
Sbjct: 125 GHHLNVVNLLGACTKPGGPL----MVIVEFCKFGN-LSTYLRSKRNEFVPYKVAPEDLYK 179
Query: 203 EI---------ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS 253
           +          + Q+ + + F+     IH DL   N+LL     +K+ D+  +    KD 
Sbjct: 180 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 239
Query: 254 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 313
            Y ++      +K                      + APE I    +T   D+WS G +L
Sbjct: 240 DYVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLL 277
Query: 314 VEL 316
            E+
Sbjct: 278 WEI 280

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 103/255 (40%), Gaps = 58/255 (22%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           Y++   +G+G F +V              K+ R I   RE A+  I+  Q      +   
Sbjct: 17  YRLLKTIGKGNFAKV--------------KLARHILTGREVAIKIIDKTQLNPTSLQKLF 62
Query: 159 RCVQIRNWFDYRNHICIVFEKL--------------GSSLYDFLRKNNYRSFPIDLVREI 204
           R V+I    ++ N I  +FE +              G  ++D+L  +          R  
Sbjct: 63  REVRIMKILNHPN-IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHG--RMKEKEARSK 119
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            RQ++  + + H   ++H DLK EN+LL +   IK+ D+         S+ F    K  A
Sbjct: 120 FRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGF-------SNEFTVGGKLDA 172
Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
                 G+  Y  P+   +   + Y  PEV          D+WS+G IL  L +G   F 
Sbjct: 173 F----CGAPPYAAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPFD 215
Query: 325 THENLEHLAMMERVL 339
             +NL+ L   ERVL
Sbjct: 216 G-QNLKELR--ERVL 227

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 96/243 (39%), Gaps = 51/243 (20%)
Query: 98  RYKIHSKMGEGTFGQVLEC----WDRERK-EMVAIKIVRGIKKYRE--AAMIEIEVLQQL 150
           R K+   +G G FGQV+E      D+      VA+K+++    + E  A M E+++L  +
Sbjct: 28  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 151 AKHDKGGN---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNN-----YRSFPIDLVR 202
             H    N    C +          + + F K G+ L  +LR        Y+  P DL +
Sbjct: 88  GHHLNVVNLLGACTKPGGPL----MVIVEFCKFGN-LSTYLRSKRNEFVPYKVAPEDLYK 142
Query: 203 EI---------ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS 253
           +          + Q+ + + F+     IH DL   N+LL     +K+ D+  +    KD 
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 202
Query: 254 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 313
            Y ++      +K                      + APE I    +T   D+WS G +L
Sbjct: 203 DYVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLL 240
Query: 314 VEL 316
            E+
Sbjct: 241 WEI 243

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 107/245 (43%), Gaps = 45/245 (18%)
Query: 101 IHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKG 156
           +  ++G G+FG V +  W  +    VA+K++       +  +A   E+ VL++       
Sbjct: 17  VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRK------- 65
Query: 157 GNRCVQIRNWFDY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
             R V I  +  Y  +  + IV +   GSSLY  L     +   I L+ +IARQ  + + 
Sbjct: 66  -TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMD 123
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H   +IH DLK  N+ L     +K+ D+  +    + S                 GS 
Sbjct: 124 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----------------GSH 166
Query: 274 TYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLE 330
            +E+   + +     + APEVI       +++  D+++ G +L EL TG+  +    N +
Sbjct: 167 QFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 221
Query: 331 HLAMM 335
            +  M
Sbjct: 222 QIIFM 226

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/253 (21%), Positives = 104/253 (41%), Gaps = 36/253 (14%)
Query: 105 MGEGTFGQVL---ECWDRERKEMVAIKIVRGIKKYREAAMIE-IEVLQQLAKHDKGGNRC 160
           +G G +G+V    +    +  ++ A+K+++     ++A   E     +Q+ +H +     
Sbjct: 62  LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL 121
Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           V +   F     + ++ + + G  L+  L +     F    V+    +++  +  +H L 
Sbjct: 122 VTLHYAFQTETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKLG 179
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +I+ D+K EN+LL S+ ++ + D+  S          K        +  DF  T      
Sbjct: 180 IIYRDIKLENILLDSNGHVVLTDFGLS----------KEFVADETERAYDFCGTI----- 224
Query: 280 QNYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEALFQTH-ENLEHLAMME 336
                    Y AP+++ G   G     D WS+G ++ EL TG + F    E      +  
Sbjct: 225 --------EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR 276
Query: 337 RVLG---PLPQHM 346
           R+L    P PQ M
Sbjct: 277 RILKSEPPYPQEM 289

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 103/248 (41%), Gaps = 32/248 (12%)
Query: 97  SRYKIHSKMGEGTFGQVLECWDR---ERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLA 151
           S  KI   +G G FG+V     +   +R+  VAIK ++    +K R   + E  ++ Q  
Sbjct: 33  SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD 92
Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
             +      + +         + I+ E +   SL  FLR+N+ +   I LV  + R +  
Sbjct: 93  HPN-----VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVG-MLRGIAA 146
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++ D+  +H DL   N+L+ S+   KV D+  S     D+S                
Sbjct: 147 GMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS---------------- 190
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL 329
              TY       I     + APE I    +T   D+WS G ++ E+ + GE  +    N 
Sbjct: 191 -DPTYTSALGGKI--PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ 247
Query: 330 EHLAMMER 337
           + +  +E+
Sbjct: 248 DVINAIEQ 255

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 103/256 (40%), Gaps = 60/256 (23%)
Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           Y++   +G+G F +V              K+ R I   RE A+  I+  Q      +   
Sbjct: 14  YRLLKTIGKGNFAKV--------------KLARHILTGREVAIKIIDKTQLNPTSLQKLF 59
Query: 159 RCVQIRNWFDYRNHICIVFEKL--------------GSSLYDFLRKNNYRSFPIDLVREI 204
           R V+I    ++ N I  +FE +              G  ++D+L  +          R  
Sbjct: 60  REVRIMKILNHPN-IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHG--RMKEKEARSK 116
Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            RQ++  + + H   ++H DLK EN+LL +   IK+ D+  S               +  
Sbjct: 117 FRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEF------------TVG 164
Query: 265 IKVIDF-GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 323
            K+  F GS  Y  P+   +   + Y  PEV          D+WS+G IL  L +G   F
Sbjct: 165 GKLDTFCGSPPYAAPE---LFQGKKYDGPEV----------DVWSLGVILYTLVSGSLPF 211
Query: 324 QTHENLEHLAMMERVL 339
              +NL+ L   ERVL
Sbjct: 212 DG-QNLKELR--ERVL 224

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 107/245 (43%), Gaps = 45/245 (18%)
Query: 101 IHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKG 156
           +  ++G G+FG V +  W  +    VA+K++       +  +A   E+ VL++       
Sbjct: 14  VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRK------- 62
Query: 157 GNRCVQIRNWFDY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
             R V I  +  Y  +  + IV +   GSSLY  L     +   I L+ +IARQ  + + 
Sbjct: 63  -TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMD 120
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H   +IH DLK  N+ L     +K+ D+  +    + S                 GS 
Sbjct: 121 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----------------GSH 163
Query: 274 TYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLE 330
            +E+   + +     + APEVI       +++  D+++ G +L EL TG+  +    N +
Sbjct: 164 QFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 218
Query: 331 HLAMM 335
            +  M
Sbjct: 219 QIIFM 223

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 107/245 (43%), Gaps = 45/245 (18%)
Query: 101 IHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKG 156
           +  ++G G+FG V +  W  +    VA+K++       +  +A   E+ VL++       
Sbjct: 17  VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRK------- 65
Query: 157 GNRCVQIRNWFDY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
             R V I  +  Y  +  + IV +   GSSLY  L     +   I L+ +IARQ  + + 
Sbjct: 66  -TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMD 123
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H   +IH DLK  N+ L     +K+ D+  +    + S                 GS 
Sbjct: 124 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----------------GSH 166
Query: 274 TYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLE 330
            +E+   + +     + APEVI       +++  D+++ G +L EL TG+  +    N +
Sbjct: 167 QFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 221
Query: 331 HLAMM 335
            +  M
Sbjct: 222 QIIFM 226

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 94/243 (38%), Gaps = 51/243 (20%)
Query: 98  RYKIHSKMGEGTFGQVLEC----WDRERK-EMVAIKIVRGIKKYRE--AAMIEIEVLQQL 150
           R K+   +G G FGQV+E      D+      VA+K+++    + E  A M E+++L  +
Sbjct: 19  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 151 AKHDKGGN---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNN-----YRSFPIDLVR 202
             H    N    C +           C    K G+ L  +LR        Y+  P DL +
Sbjct: 79  GHHLNVVNLLGACTKPGGPLMVITEFC----KFGN-LSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 203 EI---------ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS 253
           +          + Q+ + + F+     IH DL   N+LL     +K+ D+  +    KD 
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 193
Query: 254 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 313
            Y ++      +K                      + APE I    +T   D+WS G +L
Sbjct: 194 DYVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLL 231
Query: 314 VEL 316
            E+
Sbjct: 232 WEI 234

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 107/245 (43%), Gaps = 45/245 (18%)
Query: 101 IHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKG 156
           +  ++G G+FG V +  W  +    VA+K++       +  +A   E+ VL++       
Sbjct: 12  VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRK------- 60
Query: 157 GNRCVQIRNWFDY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
             R V I  +  Y  +  + IV +   GSSLY  L     +   I L+ +IARQ  + + 
Sbjct: 61  -TRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMD 118
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H   +IH DLK  N+ L     +K+ D+  +    + S                 GS 
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----------------GSH 161
Query: 274 TYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLE 330
            +E+   + +     + APEVI       +++  D+++ G +L EL TG+  +    N +
Sbjct: 162 QFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 216
Query: 331 HLAMM 335
            +  M
Sbjct: 217 QIIFM 221

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 89/246 (36%), Gaps = 54/246 (21%)
Query: 97  SRYKIHSKMGEGTFGQVLECW-----DRERKEMVAIKIVRGIKKY--REAAMIEIEVLQQ 149
           +R      +G G FG+V+E         +    VA+K+++       REA M E++VL  
Sbjct: 46  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 150 LAKHDKGGN---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNN-----YRSFPIDLV 201
           L  H    N    C           + C         L +FLR+        ++ P  + 
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCY------GDLLNFLRRKRDSFICSKTSPAIME 159
Query: 202 R-----------EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP 250
                         + Q+ + +AF+     IH DL   N+LL      K+ D+  + H  
Sbjct: 160 DDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIK 219
Query: 251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVG 310
            DS+Y  +      +K                      + APE I    +T+  D+WS G
Sbjct: 220 NDSNYVVKGNARLPVK----------------------WMAPESIFNCVYTFESDVWSYG 257
Query: 311 CILVEL 316
             L EL
Sbjct: 258 IFLWEL 263

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 94/243 (38%), Gaps = 51/243 (20%)
Query: 98  RYKIHSKMGEGTFGQVLEC----WDRERK-EMVAIKIVRGIKKYRE--AAMIEIEVLQQL 150
           R K+   +G G FGQV+E      D+      VA+K+++    + E  A M E+++L  +
Sbjct: 19  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 151 AKHDKGGN---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNN-----YRSFPIDLVR 202
             H    N    C +           C    K G+ L  +LR        Y+  P DL +
Sbjct: 79  GHHLNVVNLLGACTKPGGPLMVITEFC----KFGN-LSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 203 EI---------ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS 253
           +          + Q+ + + F+     IH DL   N+LL     +K+ D+  +    KD 
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 193
Query: 254 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 313
            Y ++      +K                      + APE I    +T   D+WS G +L
Sbjct: 194 DYVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLL 231
Query: 314 VEL 316
            E+
Sbjct: 232 WEI 234

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 45/245 (18%)
Query: 101 IHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKG 156
           +  ++G G+FG V +  W  +    VA+K++       +  +A   E+ VL++       
Sbjct: 12  VGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRK------- 60
Query: 157 GNRCVQIRNWFDYRN--HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
             R V I  +  Y     + IV +   GSSLY  L     +   I L+ +IARQ  + + 
Sbjct: 61  -TRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMD 118
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H   +IH DLK  N+ L     +K+ D+  +    + S                 GS 
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS-----------------GSH 161
Query: 274 TYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHENLE 330
            +E+   + +     + APEVI       +++  D+++ G +L EL TG+  +    N +
Sbjct: 162 QFEQLSGSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD 216
Query: 331 HLAMM 335
            +  M
Sbjct: 217 QIIFM 221

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 37/228 (16%)
Query: 100 KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKH 153
           K  S++G+G FG V  C           +VA+K ++  G  + R+    EI++L+ L   
Sbjct: 13  KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR-EIQILKALHSD 71
Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKLGSS-LYDFLRKNNYRSFPIDLVREI--ARQLLE 210
                R V   ++   R  + +V E L S  L DFL+++  R   +D  R +  + Q+ +
Sbjct: 72  FIVKYRGV---SYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICK 125
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++     +H DL   N+L+ S  ++K+ D+  +   P D  Y+              
Sbjct: 126 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYY-------------- 171
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                  P Q+ I     + APE +    ++   D+WS G +L EL T
Sbjct: 172 ---VVREPGQSPIF----WYAPESLSDNIFSRQSDVWSFGVVLYELFT 212

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 37/228 (16%)
Query: 100 KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKH 153
           K  S++G+G FG V  C           +VA+K ++  G  + R+    EI++L+ L   
Sbjct: 14  KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR-EIQILKALHSD 72
Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKLGSS-LYDFLRKNNYRSFPIDLVREI--ARQLLE 210
                R V   ++   R  + +V E L S  L DFL+++  R   +D  R +  + Q+ +
Sbjct: 73  FIVKYRGV---SYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICK 126
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++     +H DL   N+L+ S  ++K+ D+  +   P D  Y+              
Sbjct: 127 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYY-------------- 172
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                  P Q+ I     + APE +    ++   D+WS G +L EL T
Sbjct: 173 ---VVREPGQSPIF----WYAPESLSDNIFSRQSDVWSFGVVLYELFT 213

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 94/227 (41%), Gaps = 43/227 (18%)
Query: 103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEI---EVLQQLAKHDKGGNR 159
           +K GEG FG V + +       VA+K        + AAM++I   E+ QQ  +  K   +
Sbjct: 28  NKXGEGGFGVVYKGY--VNNTTVAVK--------KLAAMVDITTEELKQQFDQEIKVXAK 77
Query: 160 C-----VQIRNWFDYRNHICIVFEKL-GSSLYDFLR-KNNYRSFPIDLVREIARQLLECI 212
           C     V++  +    + +C+V+      SL D L   +           +IA+     I
Sbjct: 78  CQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGI 137
Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
            F+H+   IH D+K  N+LL  +   K+ D+       + S  F +    S         
Sbjct: 138 NFLHENHHIHRDIKSANILLDEAFTAKISDFG----LARASEKFAQXVXXSR-------- 185
Query: 273 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
                     IV T  Y APE + G   T   DI+S G +L+E+ TG
Sbjct: 186 ----------IVGTTAYXAPEALRG-EITPKSDIYSFGVVLLEIITG 221

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 97/241 (40%), Gaps = 47/241 (19%)
Query: 98  RYKIHSKMGEGTFGQVLEC----WDR-ERKEMVAIKIVRGIKKYRE--AAMIEIEVLQQL 150
           R  +   +G G FGQV+E      D+      VA+K+++    + E  A M E+++L  +
Sbjct: 28  RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 151 AKHDKGGN---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLR---------KNNYRSF-P 197
             H    N    C +          + + F K G+ L  +LR         K+ Y+ F  
Sbjct: 88  GHHLNVVNLLGACTKPGGPL----MVIVEFCKFGN-LSTYLRSKRNEFVPYKDLYKDFLT 142
Query: 198 IDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK 257
           ++ +   + Q+ + + F+     IH DL   N+LL     +K+ D+  +    KD  Y +
Sbjct: 143 LEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVR 202
Query: 258 RMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 317
           +      +K                      + APE I    +T   D+WS G +L E+ 
Sbjct: 203 KGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWEIF 240
Query: 318 T 318
           +
Sbjct: 241 S 241

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 37/228 (16%)
Query: 100 KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 154
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 16  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 74
Query: 155 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
                 V+ +   +   R ++ ++ E L   SL D+L+ +  R   I L+ +   Q+ + 
Sbjct: 75  N----IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLL-QYTSQICKG 129
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 270
           + ++     IH DL   N+L+ +   +K+ D+  +   P+D    K + P  S I     
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----- 184
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                             + APE +    ++   D+WS G +L EL T
Sbjct: 185 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 95/235 (40%), Gaps = 50/235 (21%)
Query: 105 MGEGTFGQVLEC----WDRERKEM-VAIKIVRGIKKY--REAAMIEIEVLQQLAKHDKGG 157
           +G G FG+V+E       +E   + VA+K+++       +EA M E++++  L +H+   
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 110
Query: 158 NRCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKN-----NYRSFPI----------DLV 201
              V +     +   + ++ E      L +FLR+       Y   P           DL+
Sbjct: 111 -NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 202 REIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPK 261
              + Q+ + +AF+     IH D+   NVLL +    K+ D+  +     DS+Y  +   
Sbjct: 170 H-FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 228
Query: 262 SSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 316
              +K                      + APE I    +T   D+WS G +L E+
Sbjct: 229 RLPVK----------------------WMAPESIFDCVYTVQSDVWSYGILLWEI 261

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 37/228 (16%)
Query: 100 KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKH 153
           K  S++G+G FG V  C           +VA+K ++  G  + R+    EI++L+ L   
Sbjct: 26  KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR-EIQILKALHSD 84
Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKLGSS-LYDFLRKNNYRSFPIDLVREI--ARQLLE 210
                R V   ++   R  + +V E L S  L DFL+++  R   +D  R +  + Q+ +
Sbjct: 85  FIVKYRGV---SYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICK 138
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++     +H DL   N+L+ S  ++K+ D+  +   P D  Y+              
Sbjct: 139 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYY-------------- 184
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                  P Q+ I     + APE +    ++   D+WS G +L EL T
Sbjct: 185 ---VVREPGQSPIF----WYAPESLSDNIFSRQSDVWSFGVVLYELFT 225

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 100 KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 154
           K   ++G+G FG V  C          E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 16  KFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 74
Query: 155 KGGNRCVQIRN--WFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
                 V+ +   +   R ++ ++ E L   SL ++L+K+  R   I L+ +   Q+ + 
Sbjct: 75  N----IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLL-QYTSQICKG 129
Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK-RMPKSSAIKVIDF 270
           + ++     IH DL   N+L+ +   +K+ D+  +   P+D    K + P  S I     
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----- 184
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                             + APE +    ++   D+WS G +L EL T
Sbjct: 185 -----------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 24/99 (24%)
Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           ++H DLKP NV L   + +K+ D+  +     D  + K                      
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKE--------------------- 175
Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
               V T +Y +PE +  + +    DIWS+GC+L ELC 
Sbjct: 176 ---FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 74
Query: 164 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 75  LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
            DL   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 177
Query: 283 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 335
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 178 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
Query: 336 ERVLG 340
           ER  G
Sbjct: 232 ERPEG 236

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 96/240 (40%), Gaps = 47/240 (19%)
Query: 98  RYKIHSKMGEGTFGQVLEC----WDR-ERKEMVAIKIVRGIKKYRE--AAMIEIEVLQQL 150
           R K+   +G G FGQV+E      D+      VA+K+++    + E  A M E+++L  +
Sbjct: 30  RLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 89
Query: 151 AKHDKGGN---RCVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSF-PIDLVREI- 204
             H    N    C +          + + F K G+ S Y   ++N +  + P DL ++  
Sbjct: 90  GHHLNVVNLLGACTKPGGPL----MVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFL 145
Query: 205 --------ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF 256
                   + Q+ + + F+     IH DL   N+LL     +K+ D+  +    KD    
Sbjct: 146 TLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 205
Query: 257 KRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 316
           ++      +K                      + APE I    +T   D+WS G +L E+
Sbjct: 206 RKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWEI 243

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPN----LVQL 320
Query: 164 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 321 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 380
Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
            +L   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 381 RNLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 423
Query: 283 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 335
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 424 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 477
Query: 336 ERVLG 340
           ER  G
Sbjct: 478 ERPEG 482

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPN----LVQL 281
Query: 164 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 282 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 341
Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
            +L   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 384
Query: 283 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 335
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 385 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 438
Query: 336 ERVLG 340
           ER  G
Sbjct: 439 ERPEG 443

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 108/255 (42%), Gaps = 49/255 (19%)
Query: 105 MGEGTFGQVLEC-WDRE---RKEMVAIKIVRGIKKYREAAMI--EIEVLQQLAKHD--KG 156
           +GEG FG+V  C +D E     E VA+K ++        A +  EIE+L+ L   +  K 
Sbjct: 29  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 157 GNRCVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREI--ARQLLECIA 213
              C +     D  N I ++ E L S SL ++L KN  +   I+L +++  A Q+ + + 
Sbjct: 89  KGICTE-----DGGNGIKLIMEFLPSGSLKEYLPKNKNK---INLKQQLKYAVQICKGMD 140
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDY--KSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           ++     +H DL   NVL+ S   +K+ D+    ++ T K+    K    S         
Sbjct: 141 YLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVF------ 194
Query: 272 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 331
                            + APE ++   +    D+WS G  L EL T         +   
Sbjct: 195 -----------------WYAPECLMQSKFYIASDVWSFGVTLHELLT-----YCDSDSSP 232
Query: 332 LAMMERVLGPLPQHM 346
           +A+  +++GP    M
Sbjct: 233 MALFLKMIGPTHGQM 247

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 74
Query: 164 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 75  LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
            DL   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 177
Query: 283 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 335
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 178 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
Query: 336 ERVLG 340
           ER  G
Sbjct: 232 ERPEG 236

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 25  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 79
Query: 164 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 80  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
            DL   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 182
Query: 283 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 335
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 183 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 236
Query: 336 ERVLG 340
           ER  G
Sbjct: 237 ERPEG 241

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 109/253 (43%), Gaps = 45/253 (17%)
Query: 105 MGEGTFGQVLEC-WDRE---RKEMVAIKIVRGIKKYREAAMI--EIEVLQQLAKHD--KG 156
           +GEG FG+V  C +D E     E VA+K ++        A +  EIE+L+ L   +  K 
Sbjct: 17  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 157 GNRCVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSFPIDLVREI--ARQLLECIA 213
              C +     D  N I ++ E L S SL ++L KN  +   I+L +++  A Q+ + + 
Sbjct: 77  KGICTE-----DGGNGIKLIMEFLPSGSLKEYLPKNKNK---INLKQQLKYAVQICKGMD 128
Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++     +H DL   NVL+ S   +K+ D+  +                 AI+      T
Sbjct: 129 YLGSRQYVHRDLAARNVLVESEHQVKIGDFGLT----------------KAIETDKEXXT 172
Query: 274 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 333
             +  D     S   + APE ++   +    D+WS G  L EL T         +   +A
Sbjct: 173 VKDDRD-----SPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT-----YCDSDSSPMA 222
Query: 334 MMERVLGPLPQHM 346
           +  +++GP    M
Sbjct: 223 LFLKMIGPTHGQM 235

>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From Mycobacterium Tuberculosis In Complex With Tetrahydrobenzothiophene Ax20017 Length = 681

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/163 (22%), Positives = 70/163 (42%), Gaps = 38/163 (23%)
Query: 160 CVQIRNWFDYRNH-----ICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
            VQI N+ ++ +        IV E +G      L+++  +  P+        ++L  +++
Sbjct: 141 IVQIFNFVEHTDRHGDPVGYIVMEYVGGQ---SLKRSKGQKLPVAEAIAYLLEILPALSY 197
Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H + +++ DLKPEN++L   +                            +K+ID G+ +
Sbjct: 198 LHSIGLVYNDLKPENIMLTEEQ----------------------------LKLIDLGAVS 229
Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 317
                  Y+  T  ++APE++   G T   DI++VG  L  L 
Sbjct: 230 RIN-SFGYLYGTPGFQAPEIVR-TGPTVATDIYTVGRTLAALT 270

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 25  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 79
Query: 164 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 80  LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
            DL   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 182
Query: 283 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 335
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 183 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 236
Query: 336 ERVLG 340
           ER  G
Sbjct: 237 ERPEG 241

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 34/144 (23%)
Query: 201 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 260
           + E+  Q+   + ++ +   +H DL   NVLLV+  Y K+                    
Sbjct: 472 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS------------------- 512
Query: 261 KSSAIKVIDFGSTTYERPDQNYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILV 314
                   DFG +   R D+NY  +  H      + APE I    ++   D+WS G ++ 
Sbjct: 513 --------DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMW 564
Query: 315 E-LCTGEALFQTHENLEHLAMMER 337
           E    G+  ++  +  E  AM+E+
Sbjct: 565 EAFSYGQKPYRGMKGSEVTAMLEK 588

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 95/243 (39%), Gaps = 51/243 (20%)
Query: 98  RYKIHSKMGEGTFGQVLEC----WDRERK-EMVAIKIVRGIKKYRE--AAMIEIEVLQQL 150
           R K+   +G G FGQV+E      D+      VA+K+++    + E  A M E+++L  +
Sbjct: 19  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 151 AKHDKGGN---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNN-----YRSFPIDLVR 202
             H    N    C +          + + F K G+ L  +LR        Y+  P DL +
Sbjct: 79  GHHLNVVNLLGACTKPGGPL----MVIVEFCKFGN-LSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 203 EI---------ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS 253
           +          + Q+ + + F+     IH DL   N+LL     +K+ D+  +    KD 
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 193
Query: 254 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 313
              ++      +K                      + APE I    +T   D+WS G +L
Sbjct: 194 DXVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLL 231
Query: 314 VEL 316
            E+
Sbjct: 232 WEI 234

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 95/243 (39%), Gaps = 51/243 (20%)
Query: 98  RYKIHSKMGEGTFGQVLEC----WDRERK-EMVAIKIVRGIKKYRE--AAMIEIEVLQQL 150
           R K+   +G G FGQV+E      D+      VA+K+++    + E  A M E+++L  +
Sbjct: 28  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 151 AKHDKGGN---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNN-----YRSFPIDLVR 202
             H    N    C +          + + F K G+ L  +LR        Y+  P DL +
Sbjct: 88  GHHLNVVNLLGACTKPGGPL----MVIVEFCKFGN-LSTYLRSKRNEFVPYKVAPEDLYK 142
Query: 203 EI---------ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS 253
           +          + Q+ + + F+     IH DL   N+LL     +K+ D+  +    KD 
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 202
Query: 254 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 313
              ++      +K                      + APE I    +T   D+WS G +L
Sbjct: 203 DXVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLL 240
Query: 314 VEL 316
            E+
Sbjct: 241 WEI 243

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 74
Query: 164 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 75  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
            DL   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 177
Query: 283 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 335
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 178 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
Query: 336 ERVLG 340
           ER  G
Sbjct: 232 ERPEG 236

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 34/144 (23%)
Query: 201 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 260
           + E+  Q+   + ++ +   +H DL   NVLLV+  Y K+                    
Sbjct: 471 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS------------------- 511
Query: 261 KSSAIKVIDFGSTTYERPDQNYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILV 314
                   DFG +   R D+NY  +  H      + APE I    ++   D+WS G ++ 
Sbjct: 512 --------DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMW 563
Query: 315 E-LCTGEALFQTHENLEHLAMMER 337
           E    G+  ++  +  E  AM+E+
Sbjct: 564 EAFSYGQKPYRGMKGSEVTAMLEK 587

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 31/121 (25%)
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKV 267
            +  +H   +I+ DLKPEN++L    ++K+ D+   K S+H                   
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD------------------ 174
Query: 268 IDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 327
              G+ T+          T  Y APE+++  G     D WS+G ++ ++ TG   F T E
Sbjct: 175 ---GTVTHT------FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF-TGE 224
Query: 328 N 328
           N
Sbjct: 225 N 225

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 105/251 (41%), Gaps = 36/251 (14%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRG--IKKYREAAMIEIEVLQ 148
            S  KI   +G G FG+V  C  R     +++  VAIK ++G   ++ R   + E  ++ 
Sbjct: 15  VSYVKIEEVIGAGEFGEV--CRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMG 72
Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYD-FLRKNNYRSFPIDLVREIARQ 207
           Q    +      +++         + I+ E + +   D FLR N+ +   I LV  + R 
Sbjct: 73  QFEHPN-----IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLV-GMLRG 126
Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           +   + ++ ++  +H DL   N+L+ S+   KV D+  S    ++S        S   + 
Sbjct: 127 IASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENS--------SDPTET 178
Query: 268 IDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH 326
              G     R           + APE I    +T   D WS G ++ E+ + GE  +   
Sbjct: 179 SSLGGKIPIR-----------WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDM 227
Query: 327 ENLEHLAMMER 337
            N + +  +E+
Sbjct: 228 SNQDVINAIEQ 238

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 31/121 (25%)
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKV 267
            +  +H   +I+ DLKPEN++L    ++K+ D+   K S+H                   
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD------------------ 174
Query: 268 IDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 327
              G+ T+          T  Y APE+++  G     D WS+G ++ ++ TG   F T E
Sbjct: 175 ---GTVTHX------FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF-TGE 224
Query: 328 N 328
           N
Sbjct: 225 N 225

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/219 (22%), Positives = 87/219 (39%), Gaps = 37/219 (16%)
Query: 100 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 159
           K+   +G+G FG V+      R   VA+K ++      +A + E  V+ QL +H    + 
Sbjct: 15  KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQL-RH----SN 66
Query: 160 CVQIRNWF-DYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
            VQ+     + +  + IV E +   SL D+LR         D + + +  + E + ++  
Sbjct: 67  LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 126
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
              +H DL   NVL+                            + +  KV DFG T    
Sbjct: 127 NNFVHRDLAARNVLV---------------------------SEDNVAKVSDFGLTKEAS 159
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 316
             Q+       + APE +    ++   D+WS G +L E+
Sbjct: 160 STQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEI 198

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDR----ERKEM-VAIKIVRG--IKKYREAAMIEIEVLQ 148
            +   I   +G G FG+V  C  R     +KE+ VAIK ++    +K R   + E  ++ 
Sbjct: 44  ATNISIDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 207
           Q    +      +++         + IV E +   SL  FLRK++ +   I LV  + R 
Sbjct: 102 QFDHPN-----IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLV-GMLRG 155
Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAI 265
           +   + ++ D+  +H DL   N+L+ S+   KV D+  S  L    +++Y  R  K    
Sbjct: 156 IASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK---- 211
Query: 266 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                             +  R + +PE I    +T   D+WS G +L E+ +
Sbjct: 212 ------------------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 113/270 (41%), Gaps = 42/270 (15%)
Query: 59  HVTSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWD 118
           H  +  L + G+     P   ED     + FA   + T+   I   +G G FG+V  C  
Sbjct: 8   HFGNGHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEV--CSG 64
Query: 119 R----ERKEM-VAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN 171
           R     +KE+ VAIK ++    +K R   + E  ++ Q    +      +++        
Sbjct: 65  RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN-----IIRLEGVVTKSK 119
Query: 172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENV 230
            + IV E +   SL  FLRK++ +   I LV  + R +   + ++ D+  +H DL   N+
Sbjct: 120 PVMIVTEXMENGSLDSFLRKHDAQFTVIQLV-GMLRGIASGMKYLSDMGYVHRDLAARNI 178
Query: 231 LLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRH 288
           L+ S+   KV D+  S  L    +++Y  R  K                      +  R 
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK----------------------IPIR- 215
Query: 289 YRAPEVILGLGWTYPCDIWSVGCILVELCT 318
           + +PE I    +T   D+WS G +L E+ +
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 74
Query: 164 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 75  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
            DL   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 177
Query: 283 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 335
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 178 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
Query: 336 ERVLG 340
           ER  G
Sbjct: 232 ERPEG 236

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 93/243 (38%), Gaps = 51/243 (20%)
Query: 98  RYKIHSKMGEGTFGQVLEC----WDRERK-EMVAIKIVRGIKKYRE--AAMIEIEVLQQL 150
           R K+   +G G FGQV+E      D+      VA+K+++    + E  A M E+++L  +
Sbjct: 19  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 151 AKHDKGGN---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNN-----YRSFPIDLVR 202
             H    N    C +           C    K G+ L  +LR        Y+  P DL +
Sbjct: 79  GHHLNVVNLLGACTKPGGPLMVITEFC----KFGN-LSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 203 EI---------ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS 253
           +          + Q+ + + F+     IH DL   N+LL     +K+ D+  +    KD 
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 193
Query: 254 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 313
              ++      +K                      + APE I    +T   D+WS G +L
Sbjct: 194 DXVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLL 231
Query: 314 VEL 316
            E+
Sbjct: 232 WEI 234

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDR----ERKEM-VAIKIVRG--IKKYREAAMIEIEVLQ 148
            +   I   +G G FG+V  C  R     +KE+ VAIK ++    +K R   + E  ++ 
Sbjct: 44  ATNISIDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 207
           Q    +      +++         + IV E +   SL  FLRK++ +   I LV  + R 
Sbjct: 102 QFDHPN-----IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV-GMLRG 155
Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAI 265
           +   + ++ D+  +H DL   N+L+ S+   KV D+  S  L    +++Y  R  K    
Sbjct: 156 IASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK---- 211
Query: 266 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                             +  R + +PE I    +T   D+WS G +L E+ +
Sbjct: 212 ------------------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 25  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 79
Query: 164 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 80  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
            DL   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 182
Query: 283 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 335
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 183 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 236
Query: 336 ERVLG 340
           ER  G
Sbjct: 237 ERPEG 241

>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 30/183 (16%)
Query: 150 LAKHDKGGNRCVQIRNWFDYRNHICIVFEKLG--SSLYDFLRKNNYRSFPIDLVREIARQ 207
           L K   G +  +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q
Sbjct: 108 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQ 165
Query: 208 LLECIAFMHDLCMIHTDLKPENVLL-VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           +LE +   H+  ++H D+K EN+L+ ++   +K+ D+ S     KD+ Y           
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVY----------- 213
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
             DF  T    P +       H R+  V            WS+G +L ++  G+  F+  
Sbjct: 214 -TDFDGTRVYSPPEWIRYHRYHGRSAAV------------WSLGILLYDMVCGDIPFEHD 260
Query: 327 ENL 329
           E +
Sbjct: 261 EEI 263

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 24  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 78
Query: 164 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 79  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 138
Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
            DL   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 181
Query: 283 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 335
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 182 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 235
Query: 336 ERVLG 340
           ER  G
Sbjct: 236 ERPEG 240

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 38/246 (15%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 21  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 75
Query: 164 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 76  LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 135
Query: 223 TDLKPENVLLVSSEYIKVPDYK-SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 281
            DL   N L+  +  +KV D+  S L T                     G T        
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMT---------------------GDTXTAHAGAK 174
Query: 282 YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAM 334
           + +    + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    
Sbjct: 175 FPIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR 231
Query: 335 MERVLG 340
           MER  G
Sbjct: 232 MERPEG 237

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 105/251 (41%), Gaps = 36/251 (14%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRG--IKKYREAAMIEIEVLQ 148
            S  KI   +G G FG+V  C  R     +++  VAIK ++G   ++ R   + E  ++ 
Sbjct: 13  VSYVKIEEVIGAGEFGEV--CRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMG 70
Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYD-FLRKNNYRSFPIDLVREIARQ 207
           Q    +      +++         + I+ E + +   D FLR N+ +   I LV  + R 
Sbjct: 71  QFEHPN-----IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLV-GMLRG 124
Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           +   + ++ ++  +H DL   N+L+ S+   KV D+  S    ++SS             
Sbjct: 125 IASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSS------------- 171
Query: 268 IDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH 326
                 TY       I     + APE I    +T   D WS G ++ E+ + GE  +   
Sbjct: 172 ----DPTYTSSLGGKI--PIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDM 225
Query: 327 ENLEHLAMMER 337
            N + +  +E+
Sbjct: 226 SNQDVINAIEQ 236

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 93/239 (38%), Gaps = 47/239 (19%)
Query: 98  RYKIHSKMGEGTFGQVLEC----WDR-ERKEMVAIKIVRGIKKYRE--AAMIEIEVLQQL 150
           R  +   +G G FGQV+E      D+      VA+K+++    + E  A M E+++L  +
Sbjct: 28  RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 151 AKHDKGGN---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPI-DLVREI-- 204
             H    N    C +          + + F K G+ L  +LR       P  DL ++   
Sbjct: 88  GHHLNVVNLLGACTKPGGPL----MVIVEFCKFGN-LSTYLRSKRNEFVPYKDLYKDFLT 142
Query: 205 -------ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK 257
                  + Q+ + + F+     IH DL   N+LL     +K+ D+  +    KD  Y +
Sbjct: 143 LEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 202
Query: 258 RMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 316
           +      +K                      + APE I    +T   D+WS G +L E+
Sbjct: 203 KGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWEI 239

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 22  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 76
Query: 164 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 77  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
            DL   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 179
Query: 283 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 335
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 180 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 233
Query: 336 ERVLG 340
           ER  G
Sbjct: 234 ERPEG 238

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 21  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 75
Query: 164 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 76  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 135
Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
            DL   N L+  +  +KV D+  S     D+      P  +   +               
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY---TAPAGAKFPI--------------- 177
Query: 283 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 335
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 178 -----KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 232
Query: 336 ERVLG 340
           ER  G
Sbjct: 233 ERPEG 237

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 25  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 79
Query: 164 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 80  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
            DL   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 182
Query: 283 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 335
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 183 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 236
Query: 336 ERVLG 340
           ER  G
Sbjct: 237 ERPEG 241

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 22  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 76
Query: 164 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 77  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
            DL   N L+  +  +KV D+  S     D+      P  +   +               
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTY---TAPAGAKFPI--------------- 178
Query: 283 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 335
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 179 -----KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 233
Query: 336 ERVLG 340
           ER  G
Sbjct: 234 ERPEG 238

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 95/243 (39%), Gaps = 51/243 (20%)
Query: 98  RYKIHSKMGEGTFGQVLEC----WDRERK-EMVAIKIVRGIKKYRE--AAMIEIEVLQQL 150
           R K+   +G G FGQV+E      D+      VA+K+++    + E  A M E+++L  +
Sbjct: 28  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 151 AKHDKGGN---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNN-----YRSFPIDLVR 202
             H    N    C +          + + F K G+ L  +LR        Y+  P DL +
Sbjct: 88  GHHLNVVNLLGACTKPGGPL----MVIVEFCKFGN-LSTYLRSKRNEFVPYKVAPEDLYK 142
Query: 203 EI---------ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS 253
           +          + Q+ + + F+     IH DL   N+LL     +K+ D+  +    KD 
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 202
Query: 254 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 313
              ++      +K                      + APE I    +T   D+WS G +L
Sbjct: 203 DXVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLL 240
Query: 314 VEL 316
            E+
Sbjct: 241 WEI 243

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 22  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 76
Query: 164 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 77  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
            DL   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 179
Query: 283 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 335
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 180 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 233
Query: 336 ERVLG 340
           ER  G
Sbjct: 234 ERPEG 238

>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 67/164 (40%), Gaps = 24/164 (14%)
Query: 204 IARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSS 263
           I RQ+   +   H     H D+KPEN+L+ + ++  + D+  +  T  +           
Sbjct: 139 IVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDE----------- 187
Query: 264 AIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 323
             K+   G+T          V T +Y APE       TY  DI+++ C+L E  TG   +
Sbjct: 188 --KLTQLGNT----------VGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPY 235
Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE 367
           Q  +     A + + + P P  +   +    +  + RG    PE
Sbjct: 236 QGDQLSVXGAHINQAI-PRPSTVRPGIPVAFDAVIARGXAKNPE 278

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/282 (21%), Positives = 113/282 (40%), Gaps = 57/282 (20%)
Query: 69  GVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEM-VAI 127
           G A  G   W  D KD  ++               ++G G FG V   + + R +  VAI
Sbjct: 1   GTAGLGYGSWEIDPKDLTFL--------------KELGTGQFGVVK--YGKWRGQYDVAI 44
Query: 128 KIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSS-LYD 186
           K+++      +  + E +V+  L+ H+K     VQ+      +  I I+ E + +  L +
Sbjct: 45  KMIKEGSMSEDEFIEEAKVMMNLS-HEK----LVQLYGVCTKQRPIFIITEYMANGCLLN 99
Query: 187 FLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS 246
           +LR+  +R F    + E+ + + E + ++     +H DL   N L+     +KV D+  S
Sbjct: 100 YLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 158
Query: 247 LHTPKD---SSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYP 303
            +   D   SS   + P                            +  PEV++   ++  
Sbjct: 159 RYVLDDEYTSSVGSKFP--------------------------VRWSPPEVLMYSKFSSK 192
Query: 304 CDIWSVGCILVELCTGEAL----FQTHENLEHLAMMERVLGP 341
            DIW+ G ++ E+ +   +    F   E  EH+A   R+  P
Sbjct: 193 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP 234

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 113/270 (41%), Gaps = 42/270 (15%)
Query: 59  HVTSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWD 118
           H  +  L + G+     P   ED     + FA   + T+   I   +G G FG+V  C  
Sbjct: 8   HFGNGHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEV--CSG 64
Query: 119 R----ERKEM-VAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN 171
           R     +KE+ VAIK ++    +K R   + E  ++ Q    +      +++        
Sbjct: 65  RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN-----IIRLEGVVTKSK 119
Query: 172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENV 230
            + IV E +   SL  FLRK++ +   I LV  + R +   + ++ D+  +H DL   N+
Sbjct: 120 PVMIVTEYMENGSLDSFLRKHDAQFTVIQLV-GMLRGIASGMKYLSDMGYVHRDLAARNI 178
Query: 231 LLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRH 288
           L+ S+   KV D+  S  L    +++Y  R  K                      +  R 
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK----------------------IPIR- 215
Query: 289 YRAPEVILGLGWTYPCDIWSVGCILVELCT 318
           + +PE I    +T   D+WS G +L E+ +
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 29/119 (24%)
Query: 200 LVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM 259
           L  E+  Q+ + + ++H   +IH DLKP N+ LV ++ +K+                   
Sbjct: 137 LALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIG------------------ 178
Query: 260 PKSSAIKVIDFGSTTYERPDQNYIVS--TRHYRAPEVILGLGWTYPCDIWSVGCILVEL 316
                    DFG  T  + D     S  T  Y +PE I    +    D++++G IL EL
Sbjct: 179 ---------DFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 74
Query: 164 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 75  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
            DL   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 177
Query: 283 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 335
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 178 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
Query: 336 ERVLG 340
           ER  G
Sbjct: 232 ERPEG 236

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 34/144 (23%)
Query: 201 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 260
           + E+  Q+   + ++ +   +H DL   NVLLV+  Y K+                    
Sbjct: 107 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS------------------- 147
Query: 261 KSSAIKVIDFGSTTYERPDQNYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILV 314
                   DFG +   R D+NY  +  H      + APE I    ++   D+WS G ++ 
Sbjct: 148 --------DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMW 199
Query: 315 E-LCTGEALFQTHENLEHLAMMER 337
           E    G+  ++  +  E  AM+E+
Sbjct: 200 EAFSYGQKPYRGMKGSEVTAMLEK 223

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 20  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 74
Query: 164 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 75  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
            DL   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 177
Query: 283 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 335
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 178 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
Query: 336 ERVLG 340
           ER  G
Sbjct: 232 ERPEG 236

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 113/270 (41%), Gaps = 42/270 (15%)
Query: 59  HVTSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWD 118
           H  +  L + G+     P   ED     + FA   + T+   I   +G G FG+V  C  
Sbjct: 6   HFGNGHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEV--CSG 62
Query: 119 R----ERKEM-VAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN 171
           R     +KE+ VAIK ++    +K R   + E  ++ Q    +      +++        
Sbjct: 63  RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN-----IIRLEGVVTKSK 117
Query: 172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENV 230
            + IV E +   SL  FLRK++ +   I LV  + R +   + ++ D+  +H DL   N+
Sbjct: 118 PVMIVTEYMENGSLDSFLRKHDAQFTVIQLV-GMLRGIASGMKYLSDMGYVHRDLAARNI 176
Query: 231 LLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRH 288
           L+ S+   KV D+  S  L    +++Y  R  K                      +  R 
Sbjct: 177 LINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK----------------------IPIR- 213
Query: 289 YRAPEVILGLGWTYPCDIWSVGCILVELCT 318
           + +PE I    +T   D+WS G +L E+ +
Sbjct: 214 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 34/144 (23%)
Query: 201 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 260
           + E+  Q+   + ++ +   +H DL   NVLLV+  Y K+                    
Sbjct: 113 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS------------------- 153
Query: 261 KSSAIKVIDFGSTTYERPDQNYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILV 314
                   DFG +   R D+NY  +  H      + APE I    ++   D+WS G ++ 
Sbjct: 154 --------DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMW 205
Query: 315 E-LCTGEALFQTHENLEHLAMMER 337
           E    G+  ++  +  E  AM+E+
Sbjct: 206 EAFSYGQKPYRGMKGSEVTAMLEK 229

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 34/144 (23%)
Query: 201 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 260
           + E+  Q+   + ++ +   +H DL   NVLLV+  Y K+                    
Sbjct: 127 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS------------------- 167
Query: 261 KSSAIKVIDFGSTTYERPDQNYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILV 314
                   DFG +   R D+NY  +  H      + APE I    ++   D+WS G ++ 
Sbjct: 168 --------DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMW 219
Query: 315 E-LCTGEALFQTHENLEHLAMMER 337
           E    G+  ++  +  E  AM+E+
Sbjct: 220 EAFSYGQKPYRGMKGSEVTAMLEK 243

>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396 Length = 287

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 18/191 (9%)
Query: 90  ALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ 149
           A+    T+ +    K+G G FG V +C  R    + AIK     KK    ++ E   L++
Sbjct: 2   AMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRS---KKPLAGSVDEQNALRE 58
Query: 150 LAKHDKGGNRCVQIRNWFDYR--NHICIVFEKL-GSSLYDFLRKNNYR---SFPIDLVRE 203
           +  H   G     +R +  +   +H+ I  E   G SL D + +N YR    F    +++
Sbjct: 59  VYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAELKD 117
Query: 204 IARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSS 263
           +  Q+   + ++H + ++H D+KP N+ +  +    +P+  S      D +  K M    
Sbjct: 118 LLLQVGRGLRYIHSMSLVHMDIKPSNIFISRT---SIPNAASEEGDEDDWASNKVM---- 170
Query: 264 AIKVIDFGSTT 274
             K+ D G  T
Sbjct: 171 -FKIGDLGHVT 180

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 111/268 (41%), Gaps = 43/268 (16%)
Query: 80  EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRG-- 132
           ED     + FA  E   S   I   +G G FG+V  C  R     +R+  VAIK ++   
Sbjct: 6   EDPNQAVHEFA-KEIEASCITIERVIGAGEFGEV--CSGRLKLPGKRELPVAIKTLKVGY 62
Query: 133 IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKN 191
            +K R   + E  ++ Q    +      + +         + IV E +   SL  FL+KN
Sbjct: 63  TEKQRRDFLGEASIMGQFDHPN-----IIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKN 117
Query: 192 NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHT 249
           + +   I LV  + R +   + ++ D+  +H DL   N+L+ S+   KV D+  S  L  
Sbjct: 118 DGQFTVIQLVG-MLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 176
Query: 250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSV 309
             +++Y  R  K                      +  R + APE I    +T   D+WS 
Sbjct: 177 DPEAAYTTRGGK----------------------IPIR-WTAPEAIAFRKFTSASDVWSY 213
Query: 310 GCILVELCT-GEALFQTHENLEHLAMME 336
           G ++ E+ + GE  +    N + +  +E
Sbjct: 214 GIVMWEVVSYGERPYWEMTNQDVIKAVE 241

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 34/144 (23%)
Query: 201 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 260
           + E+  Q+   + ++ +   +H DL   NVLLV+  Y K+                    
Sbjct: 109 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS------------------- 149
Query: 261 KSSAIKVIDFGSTTYERPDQNYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILV 314
                   DFG +   R D+NY  +  H      + APE I    ++   D+WS G ++ 
Sbjct: 150 --------DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMW 201
Query: 315 E-LCTGEALFQTHENLEHLAMMER 337
           E    G+  ++  +  E  AM+E+
Sbjct: 202 EAFSYGQKPYRGMKGSEVTAMLEK 225

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 33  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 87
Query: 164 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 88  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 147
Query: 223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY 282
            DL   N L+  +  +KV D+  S     D+ Y         IK                
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIK---------------- 190
Query: 283 IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAMM 335
                 + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    M
Sbjct: 191 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 244
Query: 336 ERVLG 340
           ER  G
Sbjct: 245 ERPEG 249

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDR----ERKEM-VAIKIVRG--IKKYREAAMIEIEVLQ 148
            +   I   +G G FG+V  C  R     +KE+ VAIK ++    +K R   + E  ++ 
Sbjct: 44  ATNISIDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 207
           Q    +      +++         + IV E +   SL  FLRK++ +   I LV  + R 
Sbjct: 102 QFDHPN-----IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV-GMLRG 155
Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAI 265
           +   + ++ D+  +H DL   N+L+ S+   KV D+  S  L    +++Y  R  K    
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK---- 211
Query: 266 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                             +  R + +PE I    +T   D+WS G +L E+ +
Sbjct: 212 ------------------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 34/144 (23%)
Query: 201 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 260
           + E+  Q+   + ++ +   +H DL   NVLLV+  Y K+                    
Sbjct: 119 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS------------------- 159
Query: 261 KSSAIKVIDFGSTTYERPDQNYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILV 314
                   DFG +   R D+NY  +  H      + APE I    ++   D+WS G ++ 
Sbjct: 160 --------DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMW 211
Query: 315 E-LCTGEALFQTHENLEHLAMMER 337
           E    G+  ++  +  E  AM+E+
Sbjct: 212 EAFSYGQKPYRGMKGSEVTAMLEK 235

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 102/248 (41%), Gaps = 32/248 (12%)
Query: 97  SRYKIHSKMGEGTFGQVLECWDR---ERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLA 151
           S  KI   +G G FG+V     +   +R+  VAIK ++    +K R   + E  ++ Q  
Sbjct: 7   SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD 66
Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
             +      + +         + I+ E +   SL  FLR+N+ +   I LV  + R +  
Sbjct: 67  HPN-----VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLV-GMLRGIAA 120
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++ D+  +H  L   N+L+ S+   KV D+  S     D+S                
Sbjct: 121 GMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTS---------------- 164
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL 329
              TY       I     + APE I    +T   D+WS G ++ E+ + GE  +    N 
Sbjct: 165 -DPTYTSALGGKI--PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ 221
Query: 330 EHLAMMER 337
           + +  +E+
Sbjct: 222 DVINAIEQ 229

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 34/144 (23%)
Query: 201 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 260
           + E+  Q+   + ++ +   +H DL   NVLLV+  Y K+                    
Sbjct: 129 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS------------------- 169
Query: 261 KSSAIKVIDFGSTTYERPDQNYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILV 314
                   DFG +   R D+NY  +  H      + APE I    ++   D+WS G ++ 
Sbjct: 170 --------DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMW 221
Query: 315 E-LCTGEALFQTHENLEHLAMMER 337
           E    G+  ++  +  E  AM+E+
Sbjct: 222 EAFSYGQKPYRGMKGSEVTAMLEK 245

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 34/144 (23%)
Query: 201 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 260
           + E+  Q+   + ++ +   +H DL   NVLLV+  Y K+                    
Sbjct: 129 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS------------------- 169
Query: 261 KSSAIKVIDFGSTTYERPDQNYIVSTRH------YRAPEVILGLGWTYPCDIWSVGCILV 314
                   DFG +   R D+NY  +  H      + APE I    ++   D+WS G ++ 
Sbjct: 170 --------DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMW 221
Query: 315 E-LCTGEALFQTHENLEHLAMMER 337
           E    G+  ++  +  E  AM+E+
Sbjct: 222 EAFSYGQKPYRGMKGSEVTAMLEK 245

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 38/246 (15%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 25  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 79
Query: 164 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 80  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 223 TDLKPENVLLVSSEYIKVPDYK-SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 281
            DL   N L+  +  +KV D+  S L T                     G T        
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMT---------------------GDTXTAHAGAK 178
Query: 282 YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAM 334
           + +    + APE +    ++   D+W+ G +L E+ T       G  L Q +E LE    
Sbjct: 179 FPIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR 235
Query: 335 MERVLG 340
           MER  G
Sbjct: 236 MERPEG 241

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 113/270 (41%), Gaps = 42/270 (15%)
Query: 59  HVTSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWD 118
           H  +  L + G+     P   ED     + FA   + T+   I   +G G FG+V  C  
Sbjct: 8   HFGNGHLKLPGLRTFVDPHTYEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEV--CSG 64
Query: 119 R----ERKEM-VAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN 171
           R     +KE+ VAIK ++    +K R   + E  ++ Q    +      +++        
Sbjct: 65  RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN-----IIRLEGVVTKSK 119
Query: 172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENV 230
            + IV E +   SL  FLRK++ +   I LV  + R +   + ++ D+  +H DL   N+
Sbjct: 120 PVMIVTEYMENGSLDSFLRKHDAQFTVIQLV-GMLRGIASGMKYLSDMGYVHRDLAARNI 178
Query: 231 LLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRH 288
           L+ S+   KV D+  S  L    +++Y  R  K                      +  R 
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK----------------------IPIR- 215
Query: 289 YRAPEVILGLGWTYPCDIWSVGCILVELCT 318
           + +PE I    +T   D+WS G +L E+ +
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDR----ERKEM-VAIKIVRG--IKKYREAAMIEIEVLQ 148
            +   I   +G G FG+V  C  R     +KE+ VAIK ++    +K R   + E  ++ 
Sbjct: 44  ATNISIDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 207
           Q    +      +++         + IV E +   SL  FLRK++ +   I LV  + R 
Sbjct: 102 QFDHPN-----IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV-GMLRG 155
Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAI 265
           +   + ++ D+  +H DL   N+L+ S+   KV D+  S  L    +++Y  R  K    
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK---- 211
Query: 266 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                             +  R + +PE I    +T   D+WS G +L E+ +
Sbjct: 212 ------------------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 41/232 (17%)
Query: 97  SRYKIHSKMGEGTFGQVLECWDR----ERKEM-VAIKIVRG--IKKYREAAMIEIEVLQQ 149
           +   I   +G G FG+V  C  R     +KE+ VAIK ++    +K R   + E  ++ Q
Sbjct: 16  TNISIDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 73
Query: 150 LAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL 208
               +      +++         + IV E +   SL  FLRK++ +   I LV  + R +
Sbjct: 74  FDHPN-----IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLV-GMLRGI 127
Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAIK 266
              + ++ D+  +H DL   N+L+ S+   KV D+  S  L    +++Y  R  K     
Sbjct: 128 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK----- 182
Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                            +  R + +PE I    +T   D+WS G +L E+ +
Sbjct: 183 -----------------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 112/274 (40%), Gaps = 47/274 (17%)
Query: 76  PPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIV 130
           P   ED     + FA  E   S  KI   +G G FG+V  C  R     +R   VAIK +
Sbjct: 23  PETYEDPNRAVHQFA-KELDASCIKIERVIGAGEFGEV--CSGRLKLPGKRDVAVAIKTL 79
Query: 131 RG--IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYD-F 187
           +    +K R   + E  ++ Q    +      V +         + IV E + +   D F
Sbjct: 80  KVGYTEKQRRDFLCEASIMGQFDHPN-----VVHLEGVVTRGKPVMIVIEFMENGALDAF 134
Query: 188 LRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL 247
           LRK++ +   I LV  + R +   + ++ D+  +H DL   N+L+ S+   KV D+  S 
Sbjct: 135 LRKHDGQFTVIQLVG-MLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLS- 192
Query: 248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTR----HYRAPEVILGLGWTYP 303
                             +VI+      + P+  Y  +       + APE I    +T  
Sbjct: 193 ------------------RVIE------DDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSA 228
Query: 304 CDIWSVGCILVELCT-GEALFQTHENLEHLAMME 336
            D+WS G ++ E+ + GE  +    N + +  +E
Sbjct: 229 SDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE 262

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 88/246 (35%), Gaps = 54/246 (21%)
Query: 97  SRYKIHSKMGEGTFGQVLECW-----DRERKEMVAIKIVRGIKKY--REAAMIEIEVLQQ 149
           +R      +G G FG+V+E         +    VA+K+++       REA M E++VL  
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 150 LAKHDKGGN---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNN-----YRSFPIDLV 201
           L  H    N    C           + C         L +FLR+        ++ P  + 
Sbjct: 83  LGNHMNIVNLLGACTIGGPTLVITEYCCY------GDLLNFLRRKRDSFICSKTSPAIME 136
Query: 202 R-----------EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP 250
                         + Q+ + +AF+     IH DL   N+LL      K+ D+  +    
Sbjct: 137 DDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIK 196
Query: 251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVG 310
            DS+Y  +      +K                      + APE I    +T+  D+WS G
Sbjct: 197 NDSNYVVKGNARLPVK----------------------WMAPESIFNCVYTFESDVWSYG 234
Query: 311 CILVEL 316
             L EL
Sbjct: 235 IFLWEL 240

>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770 Length = 285

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 102/235 (43%), Gaps = 22/235 (9%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK 155
           T+ +    K+G G FG V +C  R    + AIK     KK    ++ E   L+++  H  
Sbjct: 6   TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK---RSKKPLAGSVDEQNALREVYAHAV 62
Query: 156 GGNRCVQIRNWFDYR--NHICIVFEKL-GSSLYDFLRKNNYR---SFPIDLVREIARQLL 209
            G     +R +  +   +H+ I  E   G SL D + +N YR    F    ++++  Q+ 
Sbjct: 63  LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAELKDLLLQVG 121
Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
             + ++H + ++H D+KP N+ +  +    +P+  S      D +  K M      K+ D
Sbjct: 122 RGLRYIHSMSLVHMDIKPSNIFISRT---SIPNAASEEGDEDDWASNKVM-----FKIGD 173
Query: 270 FGSTTYERPDQNYIVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEAL 322
            G  T     Q     +R + A EV L   +T+    DI+++   +V     E L
Sbjct: 174 LGHVTRISSPQVEEGDSR-FLANEV-LQENYTHLPKADIFALALTVVXAAGAEPL 226

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/219 (22%), Positives = 87/219 (39%), Gaps = 37/219 (16%)
Query: 100 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 159
           K+   +G+G FG V+      R   VA+K ++      +A + E  V+ QL +H    + 
Sbjct: 24  KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQL-RH----SN 75
Query: 160 CVQIRNWF-DYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
            VQ+     + +  + IV E +   SL D+LR         D + + +  + E + ++  
Sbjct: 76  LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 135
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
              +H DL   NVL+                            + +  KV DFG T    
Sbjct: 136 NNFVHRDLAARNVLV---------------------------SEDNVAKVSDFGLTKEAS 168
Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 316
             Q+       + APE +    ++   D+WS G +L E+
Sbjct: 169 STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 207

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDR----ERKEM-VAIKIVRG--IKKYREAAMIEIEVLQ 148
            +   I   +G G FG+V  C  R     +KE+ VAIK ++    +K R   + E  ++ 
Sbjct: 32  ATNISIDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 89
Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 207
           Q    +      +++         + IV E +   SL  FLRK++ +   I LV  + R 
Sbjct: 90  QFDHPN-----IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV-GMLRG 143
Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAI 265
           +   + ++ D+  +H DL   N+L+ S+   KV D+  S  L    +++Y  R  K    
Sbjct: 144 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK---- 199
Query: 266 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                             +  R + +PE I    +T   D+WS G +L E+ +
Sbjct: 200 ------------------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 88/246 (35%), Gaps = 54/246 (21%)
Query: 97  SRYKIHSKMGEGTFGQVLECW-----DRERKEMVAIKIVRGIKKY--REAAMIEIEVLQQ 149
           +R      +G G FG+V+E         +    VA+K+++       REA M E++VL  
Sbjct: 39  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 150 LAKHDKGGN---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNN-----YRSFPIDLV 201
           L  H    N    C           + C         L +FLR+        ++ P  + 
Sbjct: 99  LGNHMNIVNLLGACTIGGPTLVITEYCCY------GDLLNFLRRKRDSFICSKTSPAIME 152
Query: 202 R-----------EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP 250
                         + Q+ + +AF+     IH DL   N+LL      K+ D+  +    
Sbjct: 153 DDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIK 212
Query: 251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVG 310
            DS+Y  +      +K                      + APE I    +T+  D+WS G
Sbjct: 213 NDSNYVVKGNARLPVK----------------------WMAPESIFNCVYTFESDVWSYG 250
Query: 311 CILVEL 316
             L EL
Sbjct: 251 IFLWEL 256

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 24/148 (16%)
Query: 173 ICIVFEKLGSSLYDFLRK--NNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPEN 229
           + I  E   +SL  F ++  +  ++ P D++ +IA  +++ +  +H  L +IH D+KP N
Sbjct: 108 VWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSN 167
Query: 230 VLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHY 289
           VL+ +   +K  D+  S +   D +           K ID G   Y  P+          
Sbjct: 168 VLINALGQVKXCDFGISGYLVDDVA-----------KDIDAGCKPYXAPE---------- 206
Query: 290 RAPEVILGLGWTYPCDIWSVGCILVELC 317
           R    +   G++   DIWS+G   +EL 
Sbjct: 207 RINPELNQKGYSVKSDIWSLGITXIELA 234

>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed With Inhibitor Pd0407824 Length = 289

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 18/185 (9%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK 155
           T+ +    K+G G FG V +C  R    + AIK     KK    ++ E   L+++  H  
Sbjct: 10  TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRS---KKPLAGSVDEQNALREVYAHAV 66
Query: 156 GGNRCVQIRNWFDYR--NHICIVFEKL-GSSLYDFLRKNNYR---SFPIDLVREIARQLL 209
            G     +R +  +   +H+ I  E   G SL D + +N YR    F    ++++  Q+ 
Sbjct: 67  LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAELKDLLLQVG 125
Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
             + ++H + ++H D+KP N+ +  +    +P+  S      D +  K M      K+ D
Sbjct: 126 RGLRYIHSMSLVHMDIKPSNIFISRT---SIPNAASEEGDEDDWASNKVM-----FKIGD 177
Query: 270 FGSTT 274
            G  T
Sbjct: 178 LGHVT 182

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/244 (22%), Positives = 102/244 (41%), Gaps = 37/244 (15%)
Query: 104 KMGEGTFGQVLECWDRERKEM-VAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 162
           ++G G FG V   + + R +  VAIK+++      +  + E +V+  L+ H+K     VQ
Sbjct: 16  ELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEK----LVQ 68
Query: 163 IRNWFDYRNHICIVFEKLGSS-LYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 221
           +      +  I I+ E + +  L ++LR+  +R F    + E+ + + E + ++     +
Sbjct: 69  LYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFL 127
Query: 222 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 281
           H DL   N L+     +KV D+  S +   D     R  K                    
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPV----------------- 170
Query: 282 YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL----FQTHENLEHLAMMER 337
                  +  PEV++   ++   DIW+ G ++ E+ +   +    F   E  EH+A   R
Sbjct: 171 ------RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR 224
Query: 338 VLGP 341
           +  P
Sbjct: 225 LYRP 228

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 102/236 (43%), Gaps = 51/236 (21%)
Query: 104 KMGEGTFGQVL--ECWD---RERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHD--- 154
           ++GEG FG+V   EC++    + K +VA+K ++      R+    E E+L  L +H+   
Sbjct: 20  ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-QHEHIV 78
Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSF-------PIDLVRE--- 203
           K    CV+        + + +VFE +    L  FLR +   +        P +L +    
Sbjct: 79  KFYGVCVE-------GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQML 131
Query: 204 -IARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 262
            IA+Q+   + ++     +H DL   N L+  +  +K+ D+  S                
Sbjct: 132 HIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSR--------------- 176
Query: 263 SAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                 D  ST Y R   + ++  R +  PE I+   +T   D+WS+G +L E+ T
Sbjct: 177 ------DVYSTDYYRVGGHTMLPIR-WMPPESIMYRKFTTESDVWSLGVVLWEIFT 225

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 108/244 (44%), Gaps = 37/244 (15%)
Query: 104 KMGEGTFGQVLECWDRERKEM-VAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 162
           ++G G FG V   + + R +  VAIK+++      +  + E +V+  L+ H+K     VQ
Sbjct: 31  ELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEK----LVQ 83
Query: 163 IRNWFDYRNHICIVFEKLGSS-LYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 221
           +      +  I I+ E + +  L ++LR+  +R F    + E+ + + E + ++     +
Sbjct: 84  LYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFL 142
Query: 222 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 281
           H DL   N L+     +KV D+  S +   D        ++S++     GS    R    
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-------ETSSV-----GSKFPVR---- 186
Query: 282 YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL----FQTHENLEHLAMMER 337
                  +  PEV++   ++   DIW+ G ++ E+ +   +    F   E  EH+A   R
Sbjct: 187 -------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR 239
Query: 338 VLGP 341
           +  P
Sbjct: 240 LYRP 243

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 88/246 (35%), Gaps = 54/246 (21%)
Query: 97  SRYKIHSKMGEGTFGQVLECW-----DRERKEMVAIKIVRGIKKY--REAAMIEIEVLQQ 149
           +R      +G G FG+V+E         +    VA+K+++       REA M E++VL  
Sbjct: 46  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 150 LAKHDKGGN---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNN-----YRSFPIDLV 201
           L  H    N    C           + C         L +FLR+        ++ P  + 
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCY------GDLLNFLRRKRDSFICSKTSPAIME 159
Query: 202 R-----------EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP 250
                         + Q+ + +AF+     IH DL   N+LL      K+ D+  +    
Sbjct: 160 DDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIK 219
Query: 251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVG 310
            DS+Y  +      +K                      + APE I    +T+  D+WS G
Sbjct: 220 NDSNYVVKGNARLPVK----------------------WMAPESIFNCVYTFESDVWSYG 257
Query: 311 CILVEL 316
             L EL
Sbjct: 258 IFLWEL 263

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 88/246 (35%), Gaps = 54/246 (21%)
Query: 97  SRYKIHSKMGEGTFGQVLEC-----WDRERKEMVAIKIVRGIKKY--REAAMIEIEVLQQ 149
           +R      +G G FG+V+E         +    VA+K+++       REA M E++VL  
Sbjct: 41  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 150 LAKHDKGGN---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNN-----YRSFPIDLV 201
           L  H    N    C           + C         L +FLR+        ++ P  + 
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCY------GDLLNFLRRKRDSFICSKTSPAIME 154
Query: 202 R-----------EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP 250
                         + Q+ + +AF+     IH DL   N+LL      K+ D+  +    
Sbjct: 155 DDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIK 214
Query: 251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVG 310
            DS+Y  +      +K                      + APE I    +T+  D+WS G
Sbjct: 215 NDSNYVVKGNARLPVK----------------------WMAPESIFNCVYTFESDVWSYG 252
Query: 311 CILVEL 316
             L EL
Sbjct: 253 IFLWEL 258

>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839 Length = 287

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 18/185 (9%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK 155
           T+ +    K+G G FG V +C  R    + AIK     KK    ++ E   L+++  H  
Sbjct: 8   TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRS---KKPLAGSVDEQNALREVYAHAV 64
Query: 156 GGNRCVQIRNWFDYR--NHICIVFEKL-GSSLYDFLRKNNYR---SFPIDLVREIARQLL 209
            G     +R +  +   +H+ I  E   G SL D + +N YR    F    ++++  Q+ 
Sbjct: 65  LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAELKDLLLQVG 123
Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
             + ++H + ++H D+KP N+ +  +    +P+  S      D +  K M      K+ D
Sbjct: 124 RGLRYIHSMSLVHMDIKPSNIFISRT---SIPNAASEEGDEDDWASNKVM-----FKIGD 175
Query: 270 FGSTT 274
            G  T
Sbjct: 176 LGHVT 180

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDR----ERKEM-VAIKIVRG--IKKYREAAMIEIEVLQ 148
            +   I   +G G FG+V  C  R     +KE+ VAIK ++    +K R   + E  ++ 
Sbjct: 15  ATNISIDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 72
Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 207
           Q    +      +++         + IV E +   SL  FLRK++ +   I LV  + R 
Sbjct: 73  QFDHPN-----IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV-GMLRG 126
Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAI 265
           +   + ++ D+  +H DL   N+L+ S+   KV D+  S  L    +++Y  R  K    
Sbjct: 127 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK---- 182
Query: 266 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                             +  R + +PE I    +T   D+WS G +L E+ +
Sbjct: 183 ------------------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/247 (22%), Positives = 104/247 (42%), Gaps = 43/247 (17%)
Query: 104 KMGEGTFGQVLECWDRERKEM-VAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 162
           ++G G FG V   + + R +  VAIK+++      +  + E +V+  L+ H+K     VQ
Sbjct: 31  ELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEK----LVQ 83
Query: 163 IRNWFDYRNHICIVFEKLGSS-LYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 221
           +      +  I I+ E + +  L ++LR+  +R F    + E+ + + E + ++     +
Sbjct: 84  LYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFL 142
Query: 222 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKD---SSYFKRMPKSSAIKVIDFGSTTYERP 278
           H DL   N L+     +KV D+  S +   D   SS   + P                  
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP------------------ 184
Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL----FQTHENLEHLAM 334
                     +  PEV++   ++   DIW+ G ++ E+ +   +    F   E  EH+A 
Sbjct: 185 --------VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 236
Query: 335 MERVLGP 341
             R+  P
Sbjct: 237 GLRLYRP 243

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/218 (22%), Positives = 84/218 (38%), Gaps = 35/218 (16%)
Query: 100 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 159
           K+   +G+G FG V+      R   VA+K ++      +A + E  V+ QL    +  N 
Sbjct: 9   KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQL----RHSNL 61
Query: 160 CVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 218
              +    + +  + IV E +   SL D+LR         D + + +  + E + ++   
Sbjct: 62  VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 121
Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
             +H DL   NVL+                            + +  KV DFG T     
Sbjct: 122 NFVHRDLAARNVLV---------------------------SEDNVAKVSDFGLTKEASS 154
Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 316
            Q+       + APE +    ++   D+WS G +L E+
Sbjct: 155 TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 192

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDR----ERKEM-VAIKIVRG--IKKYREAAMIEIEVLQ 148
            +   I   +G G FG+V  C  R     +KE+ VAIK ++    +K R   + E  ++ 
Sbjct: 44  ATNISIDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 207
           Q    +      +++         + IV E +   SL  FLRK++ +   I LV  + R 
Sbjct: 102 QFDHPN-----IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV-GMLRG 155
Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS--LHTPKDSSYFKRMPKSSAI 265
           +   + ++ D+  +H DL   N+L+ S+   KV D+  +  L    +++Y  R  K    
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGK---- 211
Query: 266 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                             +  R + +PE I    +T   D+WS G +L E+ +
Sbjct: 212 ------------------IPIR-WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/218 (22%), Positives = 84/218 (38%), Gaps = 35/218 (16%)
Query: 100 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 159
           K+   +G+G FG V+      R   VA+K ++      +A + E  V+ QL    +  N 
Sbjct: 196 KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQL----RHSNL 248
Query: 160 CVQIRNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 218
              +    + +  + IV E +   SL D+LR         D + + +  + E + ++   
Sbjct: 249 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 308
Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
             +H DL   NVL+                            + +  KV DFG T     
Sbjct: 309 NFVHRDLAARNVLV---------------------------SEDNVAKVSDFGLTKEASS 341
Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 316
            Q+       + APE +    ++   D+WS G +L E+
Sbjct: 342 TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 379

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/297 (19%), Positives = 115/297 (38%), Gaps = 39/297 (13%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR--EAAMIEIEVLQQLAKHDKGGNRCVQ 162
           +G+G    V     ++  ++ AIK+   I   R  +  M E EVL++L  + K   +   
Sbjct: 17  LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL--NHKNIVKLFA 74
Query: 163 IRNWFDYRNHICIVFEKLGSSLYDFLRK-NNYRSFPIDLVREIARQLLECIAFMHDLCMI 221
           I      R+ + I+      SLY  L + +N    P      + R ++  +  + +  ++
Sbjct: 75  IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIV 134
Query: 222 HTDLKPENVLLVSSE----YIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
           H ++KP N++ V  E      K+ D+ ++     D  +           V  +G+  Y  
Sbjct: 135 HRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF-----------VXLYGTEEYLH 183
Query: 278 PD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN-LEHLAM 334
           PD  +  ++   H +         +    D+WS+G       TG   F+  E    +  +
Sbjct: 184 PDMYERAVLRKDHQKK--------YGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEV 235
Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIK---SVMKLPRLQNLI 388
           M +++   P   +  V +        G +DW        S+     V+  P L N++
Sbjct: 236 MYKIITGKPSGAISGVQK-----AENGPIDWSGDMPVSCSLSRGLQVLLTPVLANIL 287

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 95/241 (39%), Gaps = 48/241 (19%)
Query: 98  RYKIHSKMGEGTFGQVLEC----WDRERK-EMVAIKIVRGIKKYRE--AAMIEIEVLQQL 150
           R  +   +G G FGQV+E      D+      VA+K+++    + E  A M E+++L  +
Sbjct: 29  RLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 88
Query: 151 AKHDKGGN---RCVQIRNWFDYRNHICIVFEKLGS-SLYDFLRKNNYRSF--PIDLVREI 204
             H    N    C +          + + F K G+ S Y   ++N +  +  P DL ++ 
Sbjct: 89  GHHLNVVNLLGACTKPGGPL----MVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDF 144
Query: 205 ---------ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 255
                    + Q+ + + F+     IH DL   N+LL     +K+ D+  +    KD   
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 204
Query: 256 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE 315
            ++      +K                      + APE I    +T   D+WS G +L E
Sbjct: 205 VRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGVLLWE 242
Query: 316 L 316
           +
Sbjct: 243 I 243

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 97/237 (40%), Gaps = 49/237 (20%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDR----ERKEM-VAIKIVRG--IKKYREAAMIEIEVLQ 148
            +   I   +G G FG+V  C  R     +KE+ VAIK ++    +K R   + E  ++ 
Sbjct: 44  ATNISIDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 207
           Q    +      +++         + IV E +   SL  FLRK++ +   I LV  + R 
Sbjct: 102 QFDHPN-----IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV-GMLRG 155
Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           +   + ++ D+  +H DL   N+L+ S+   KV D+                        
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG----------------------- 192
Query: 268 IDFGSTTYERPDQNYIVSTR------HYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
              G    + P+  Y  +TR       + +PE I    +T   D+WS G +L E+ +
Sbjct: 193 --LGRVLEDDPEAAY--TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 99/246 (40%), Gaps = 38/246 (15%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+G G FG+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 18  KLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 72
Query: 164 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 73  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 223 TDLKPENVLLVSSEYIKVPDYK-SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 281
            DL   N L+  +  +KV D+  S L T                     G T        
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMT---------------------GDTXTAHAGAK 171
Query: 282 YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAM 334
           + +    + APE +    ++   D+W+ G +L E+ T       G    Q +E LE    
Sbjct: 172 FPIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYR 228
Query: 335 MERVLG 340
           MER  G
Sbjct: 229 MERPEG 234

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 90/229 (39%), Gaps = 50/229 (21%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD-KGGNRCVQI 163
           +G G FGQV +   R   +   IK V   K   E A  E++ L +L   +    N C   
Sbjct: 19  IGSGGFGQVFKAKHRIDGKTYVIKRV---KYNNEKAEREVKALAKLDHVNIVHYNGCW-- 73
Query: 164 RNWFDY----------RNHICIVFEKL----GSSLYDFLRKNNYRSFPIDLVREIARQLL 209
            + FDY          R+    +F ++      +L  ++ K         L  E+  Q+ 
Sbjct: 74  -DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQIT 132
Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
           + + ++H   +I+ DLKP N+ LV ++ +K+                            D
Sbjct: 133 KGVDYIHSKKLINRDLKPSNIFLVDTKQVKIG---------------------------D 165
Query: 270 FGSTTYERPDQNYIVS--TRHYRAPEVILGLGWTYPCDIWSVGCILVEL 316
           FG  T  + D     S  T  Y +PE I    +    D++++G IL EL
Sbjct: 166 FGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 104/254 (40%), Gaps = 46/254 (18%)
Query: 96  TSRYKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRG--IKKYREAAMIEIEVLQ 148
            SR  I   +G G  G+V  C+ R     +R   VAIK ++    ++ R   + E  ++ 
Sbjct: 48  ASRIHIEKIIGSGDSGEV--CYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMG 105
Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 207
           Q    +      +++           IV E +   SL  FLR ++ + F I  +  + R 
Sbjct: 106 QFDHPN-----IIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ-FTIMQLVGMLRG 159
Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           +   + ++ DL  +H DL   NVL+ S+   KV D+  S                   +V
Sbjct: 160 VGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLS-------------------RV 200
Query: 268 IDFGSTTYERPDQNYIVSTR----HYRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEAL 322
           ++      + PD  Y  +       + APE I    ++   D+WS G ++ E L  GE  
Sbjct: 201 LE------DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
Query: 323 FQTHENLEHLAMME 336
           +    N + ++ +E
Sbjct: 255 YWNMTNRDVISSVE 268

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/225 (21%), Positives = 96/225 (42%), Gaps = 42/225 (18%)
Query: 105 MGEGTFGQV----LECWDRERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGN 158
           +G G FG+V    L+    +++  VAIK ++    +K R   + E  ++ Q + H+    
Sbjct: 52  IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHN---- 107
Query: 159 RCVQIRNWFDYRNHICIVFEKLGSSLYD-FLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             +++         + I+ E + +   D FLR+ +     + LV  + R +   + ++ +
Sbjct: 108 -IIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLV-GMLRGIAAGMKYLAN 165
Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
           +  +H DL   N+L+ S+   KV D+  S                   +V++      + 
Sbjct: 166 MNYVHRDLAARNILVNSNLVCKVSDFGLS-------------------RVLE------DD 200
Query: 278 PDQNYIVSTRH----YRAPEVILGLGWTYPCDIWSVGCILVELCT 318
           P+  Y  S       + APE I    +T   D+WS G ++ E+ T
Sbjct: 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 99/246 (40%), Gaps = 38/246 (15%)
Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQI 163
           K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH       VQ+
Sbjct: 18  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP----NLVQL 72
Query: 164 RNWFDYRNHICIVFEKLG-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIH 222
                      I+ E +   +L D+LR+ N +     ++  +A Q+   + ++     IH
Sbjct: 73  LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 223 TDLKPENVLLVSSEYIKVPDYK-SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN 281
            DL   N L+  +  +KV D+  S L T                     G T        
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMT---------------------GDTXTAHAGAK 171
Query: 282 YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-------GEALFQTHENLEHLAM 334
           + +    + APE +    ++   D+W+ G +L E+ T       G    Q +E LE    
Sbjct: 172 FPIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYR 228
Query: 335 MERVLG 340
           MER  G
Sbjct: 229 MERPEG 234

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 55/247 (22%), Positives = 104/247 (42%), Gaps = 43/247 (17%)
Query: 104 KMGEGTFGQVLECWDRERKEM-VAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 162
           ++G G FG V   + + R +  VAIK+++      +  + E +V+  L+ H+K     VQ
Sbjct: 16  ELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEK----LVQ 68
Query: 163 IRNWFDYRNHICIVFEKLGSS-LYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 221
           +      +  I I+ E + +  L ++LR+  +R F    + E+ + + E + ++     +
Sbjct: 69  LYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFL 127
Query: 222 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKD---SSYFKRMPKSSAIKVIDFGSTTYERP 278
           H DL   N L+     +KV D+  S +   D   SS   + P                  
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV----------------- 170
Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL----FQTHENLEHLAM 334
                     +  PEV++   ++   DIW+ G ++ E+ +   +    F   E  EH+A 
Sbjct: 171 ---------RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 221
Query: 335 MERVLGP 341
             R+  P
Sbjct: 222 GLRLYRP 228

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 55/247 (22%), Positives = 104/247 (42%), Gaps = 43/247 (17%)
Query: 104 KMGEGTFGQVLECWDRERKEM-VAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 162
           ++G G FG V   + + R +  VAIK+++      +  + E +V+  L+ H+K     VQ
Sbjct: 15  ELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEK----LVQ 67
Query: 163 IRNWFDYRNHICIVFEKLGSS-LYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 221
           +      +  I I+ E + +  L ++LR+  +R F    + E+ + + E + ++     +
Sbjct: 68  LYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFL 126
Query: 222 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKD---SSYFKRMPKSSAIKVIDFGSTTYERP 278
           H DL   N L+     +KV D+  S +   D   SS   + P                  
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP------------------ 168
Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL----FQTHENLEHLAM 334
                     +  PEV++   ++   DIW+ G ++ E+ +   +    F   E  EH+A 
Sbjct: 169 --------VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 220
Query: 335 MERVLGP 341
             R+  P
Sbjct: 221 GLRLYRP 227

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/247 (22%), Positives = 104/247 (42%), Gaps = 43/247 (17%)
Query: 104 KMGEGTFGQVLECWDRERKEM-VAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ 162
           ++G G FG V   + + R +  VAIK+++      +  + E +V+  L+ H+K     VQ
Sbjct: 11  ELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEK----LVQ 63
Query: 163 IRNWFDYRNHICIVFEKLGSS-LYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI 221
           +      +  I I+ E + +  L ++LR+  +R F    + E+ + + E + ++     +
Sbjct: 64  LYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFL 122
Query: 222 HTDLKPENVLLVSSEYIKVPDYKSSLHTPKD---SSYFKRMPKSSAIKVIDFGSTTYERP 278
           H DL   N L+     +KV D+  S +   D   SS   + P                  
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFP------------------ 164
Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL----FQTHENLEHLAM 334
                     +  PEV++   ++   DIW+ G ++ E+ +   +    F   E  EH+A 
Sbjct: 165 --------VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 216
Query: 335 MERVLGP 341
             R+  P
Sbjct: 217 GLRLYRP 223

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 59/297 (19%), Positives = 115/297 (38%), Gaps = 39/297 (13%)
Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR--EAAMIEIEVLQQLAKHDKGGNRCVQ 162
           +G+G    V     ++  ++ AIK+   I   R  +  M E EVL++L  + K   +   
Sbjct: 17  LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL--NHKNIVKLFA 74
Query: 163 IRNWFDYRNHICIVFEKLGSSLYDFLRK-NNYRSFPIDLVREIARQLLECIAFMHDLCMI 221
           I      R+ + I+      SLY  L + +N    P      + R ++  +  + +  ++
Sbjct: 75  IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIV 134
Query: 222 HTDLKPENVLLVSSE----YIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
           H ++KP N++ V  E      K+ D+ ++     D  +           V  +G+  Y  
Sbjct: 135 HRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF-----------VSLYGTEEYLH 183
Query: 278 PD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN-LEHLAM 334
           PD  +  ++   H +         +    D+WS+G       TG   F+  E    +  +
Sbjct: 184 PDMYERAVLRKDHQKK--------YGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEV 235
Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIK---SVMKLPRLQNLI 388
           M +++   P   +  V +        G +DW        S+     V+  P L N++
Sbjct: 236 MYKIITGKPSGAISGVQK-----AENGPIDWSGDMPVSCSLSRGLQVLLTPVLANIL 287

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 96/236 (40%), Gaps = 46/236 (19%)
Query: 104 KMGEGTFGQV-LECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN-RCV 161
           ++G G FG V L  W  +    VA+K+++      E +M E E  Q+     K  + + V
Sbjct: 15  ELGSGQFGVVKLGKWKGQYD--VAVKMIK------EGSMSEDEFFQEAQTMMKLSHPKLV 66
Query: 162 QIRNWFDYRNHICIVFEKLGSS-LYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           +          I IV E + +  L ++LR +     P  L+ E+   + E +AF+     
Sbjct: 67  KFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLL-EMCYDVCEGMAFLESHQF 125
Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 280
           IH DL   N L+                            +   +KV DFG T Y   DQ
Sbjct: 126 IHRDLAARNCLV---------------------------DRDLCVKVSDFGMTRYVLDDQ 158
Query: 281 NYIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 330
            Y+ S        + APEV     ++   D+W+ G ++ E+ + G+  +  + N E
Sbjct: 159 -YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE 213

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 99/228 (43%), Gaps = 37/228 (16%)
Query: 100 KIHSKMGEGTFGQVLEC----WDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKH 153
           K  S++G+G FG V  C           +VA+K ++  G  + R+    EI++L+ L   
Sbjct: 10  KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQR-EIQILKALHSD 68
Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKLGSS-LYDFLRKNNYRSFPIDLVREI--ARQLLE 210
                R V   ++   R  + +V E L S  L DFL+++  R   +D  R +  + Q+ +
Sbjct: 69  FIVKYRGV---SYGPGRPELRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICK 122
Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++     +H DL   N+L+ S  ++K+ D+  +   P                 +D 
Sbjct: 123 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP-----------------LDK 165
Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                  P Q+ I     + APE +    ++   D+WS G +L EL T
Sbjct: 166 DXXVVREPGQSPIF----WYAPESLSDNIFSRQSDVWSFGVVLYELFT 209

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	433
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	0.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	0.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	1e-180
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	1e-151
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	1e-146
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	1e-139
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	1e-119
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	5e-56
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	3e-55
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	2e-51
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	1e-50
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	2e-50
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	3e-50
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	7e-50
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	8e-50
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	9e-49
3o0g_A	292	Cell division protein kinase 5; kinase activator c	1e-48
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	2e-48
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-48
3niz_A	311	Rhodanese family protein; structural genomics, str	1e-47
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	3e-47
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	4e-47
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-46
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	4e-46
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	1e-45
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	8e-45
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	2e-44
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	2e-44
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	3e-44
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-44
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	4e-44
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	7e-44
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	9e-44
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	3e-43
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	6e-43
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	9e-43
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	9e-43
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-42
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-42
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	4e-42
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	6e-42
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	7e-42
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	9e-42
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	2e-41
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	4e-41
2a19_B	284	Interferon-induced, double-stranded RNA-activated	7e-41
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	7e-41
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	7e-41
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	9e-41
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	1e-40
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	1e-40
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	2e-40
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-40
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	2e-40
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	2e-40
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	2e-40
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	3e-40
3bhy_A	283	Death-associated protein kinase 3; death associate	3e-40
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	5e-40
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	9e-40
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	1e-39
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-39
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	1e-39
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-39
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-39
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	2e-39
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-39
3rp9_A	458	Mitogen-activated protein kinase; structural genom	2e-39
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-39
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	3e-39
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	4e-39
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	8e-39
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	8e-39
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	9e-39
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	1e-38
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-38
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	3e-38
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	6e-38
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-37
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-37
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	5e-37
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	8e-37
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-36
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-36
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-36
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	4e-36
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	5e-36
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	6e-36
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	7e-36
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-35
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	2e-35
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-34
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	5e-34
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	1e-33
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-33
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	3e-33
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-33
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	8e-33
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	2e-32
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	6e-32
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	6e-32
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	2e-31
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	3e-29
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-28
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	5e-28
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	4e-26
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	8e-26
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	9e-26
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	9e-26
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	1e-25
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	3e-25
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	5e-25
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	4e-24
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	8e-24
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-23
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	3e-23
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	3e-23
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	6e-23
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	7e-23
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	9e-23
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	3e-22
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	4e-22
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	4e-22
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	5e-22
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	6e-22
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-21
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	3e-21
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	4e-21
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	5e-21
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-20
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	2e-20
3an0_A	340	Dual specificity mitogen-activated protein kinase;	3e-20
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	3e-20
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	4e-20
2dyl_A	318	Dual specificity mitogen-activated protein kinase	1e-19
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	1e-19
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	1e-19
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-19
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	3e-19
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	3e-19
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	3e-19
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	5e-19
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	5e-19
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	8e-19
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-18
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	2e-18
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	3e-18
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	4e-18
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	5e-18
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	6e-18
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	6e-18
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	6e-18
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	7e-18
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	7e-18
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-17
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	1e-17
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-17
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	3e-17
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	7e-17
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	8e-17
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	8e-17
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	9e-17
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	1e-16
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	1e-16
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-16
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-16
3soc_A	322	Activin receptor type-2A; structural genomics cons	3e-16
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-15
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	1e-15
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-15
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	1e-15
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-15
3q4u_A	301	Activin receptor type-1; structural genomics conso	2e-15
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	2e-15
3ork_A	311	Serine/threonine protein kinase; structural genomi	2e-15
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-14
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	1e-14
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-14
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	1e-13
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	1e-13
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	2e-13
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	3e-13
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	7e-13
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-12
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	3e-12
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	3e-12
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	6e-12
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-11
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-11
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-11
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	4e-11
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	4e-11
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	5e-11
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	6e-11
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-10
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	1e-10
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-10
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-10
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	2e-10
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	4e-10
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	5e-10
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	8e-10
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	1e-09
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	6e-09
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	1e-08
3uqc_A	286	Probable conserved transmembrane protein; structur	2e-08
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-08
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	3e-08
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	6e-08
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	8e-08
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	1e-07
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-07
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	1e-06
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	2e-06
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	3e-06
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	5e-06
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	1e-05
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	1e-05
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-05
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	4e-05
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	4e-05
4aoj_A	329	High affinity nerve growth factor receptor; transf	8e-05
3pls_A	298	Macrophage-stimulating protein receptor; protein k	1e-04
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	1e-04
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	3e-04
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	3e-04
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	4e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	4e-04

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score =  531 bits (1370), Expect = 0.0
 Identities = 135/359 (37%), Positives = 206/359 (57%), Gaps = 11/359 (3%)

Query: 71  ARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV 130
           +   +  ++ DD+  H+ +  G  L + + +  KMG+GTFG+VL C   + K+  A+K+V
Sbjct: 9   SGRENLYFQGDDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVV 68

Query: 131 RGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRK 190
           R IKKY  +A IE ++L+++   D   N  V+    F Y +H+C++FE LG SLY+ + +
Sbjct: 69  RNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITR 128

Query: 191 NNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP 250
           NNY  F I+ ++    ++L+ + ++  + + HTDLKPEN+LL    + K       +   
Sbjct: 129 NNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDG 188

Query: 251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVG 310
           K         KS+ IK+IDFG  T++      I++TR YRAPEVIL LGW    D+WS G
Sbjct: 189 KKIQI--YRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFG 246

Query: 311 CILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDR-HAEKYVRRG--RLDWPE 367
           C+L EL TG  LF+THE++EHLAMME ++ P+P++ML    + +  KYV +   +L WPE
Sbjct: 247 CVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPE 306

Query: 368 GAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
            A+S  SIK V K   L  +I   +          L  +L+ DPT R +  E L+H F 
Sbjct: 307 NASSINSIKHVKKCLPLYKIIKHEL------FCDFLYSILQIDPTLRPSPAELLKHKFL 359

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score =  511 bits (1317), Expect = 0.0
 Identities = 154/346 (44%), Positives = 220/346 (63%), Gaps = 15/346 (4%)

Query: 85  GHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKKYREAAMIE 143
            H +   G+ L++RY+I   +GEG FG+V+EC D +     VA+KIV+ + +Y EAA  E
Sbjct: 2   MHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSE 61

Query: 144 IEVLQQLAKHDKGG-NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVR 202
           I+VL+ L   D     RCVQ+  WF++  HICIVFE LG S YDF+++N +  F +D +R
Sbjct: 62  IQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIR 121

Query: 203 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 262
           ++A Q+ + + F+H   + HTDLKPEN+L V S+Y +  + K            +R   +
Sbjct: 122 KMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRD--------ERTLIN 173

Query: 263 SAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL 322
             IKV+DFGS TY+    + +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL+E   G  +
Sbjct: 174 PDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTV 233

Query: 323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP 382
           F TH++ EHLAMMER+LGPLP+HM+++  +   KY    RLDW E +++   +    K P
Sbjct: 234 FPTHDSKEHLAMMERILGPLPKHMIQKTRKR--KYFHHDRLDWDEHSSAGRYVSRACK-P 290

Query: 383 RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
             + ++ Q V+H    L  L+Q +L YDP  R+T REAL+HPFF  
Sbjct: 291 LKEFMLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPFFDL 334

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score =  504 bits (1301), Expect = e-180
 Identities = 154/351 (43%), Positives = 223/351 (63%), Gaps = 15/351 (4%)

Query: 80  EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGIKKYRE 138
           EDDK+GH +  +G+ L  RY+I   +GEGTFG+V+EC D  R K  VA+KI+R + KYRE
Sbjct: 2   EDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYRE 61

Query: 139 AAMIEIEVLQQLAKHDKGG-NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFP 197
           AA +EI VL+++ + DK     CV + +WF++  H+CI FE LG + ++FL++NN++ +P
Sbjct: 62  AARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYP 121

Query: 198 IDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK 257
           +  VR +A QL   + F+H+  + HTDLKPEN+L V+SE+  + +   S          +
Sbjct: 122 LPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCE--------E 173

Query: 258 RMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 317
           +  K+++I+V DFGS T++      IV+TRHYR PEVIL LGW  PCD+WS+GCIL E  
Sbjct: 174 KSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYY 233

Query: 318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS 377
            G  LFQTHEN EHL MME++LGP+P HM+ R  +   KY  +G L W E ++    +K 
Sbjct: 234 RGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQ--KYFYKGGLVWDENSSDGRYVKE 291

Query: 378 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
             K P    ++   ++H    L  L++ +L +DP  R+T  EAL HPFF  
Sbjct: 292 NCK-PLKSYMLQDSLEHV--QLFDLMRRMLEFDPAQRITLAEALLHPFFAG 339

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score =  434 bits (1117), Expect = e-151
 Identities = 115/359 (32%), Positives = 172/359 (47%), Gaps = 36/359 (10%)

Query: 81  DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAA 140
           DD  G Y+    +++  RY++   +G+G+FGQV++ +D +  + VA+K+VR  K++   A
Sbjct: 81  DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140

Query: 141 MIEIEVLQQLAKHDKGG-NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPID 199
             EI +L+ L K DK      + +   F +RNHIC+ FE L  +LY+ ++KN ++ F + 
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200

Query: 200 LVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM 259
           LVR+ A  +L+C+  +H   +IH DLKPEN+LL                           
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQ------------------------- 235

Query: 260 PKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG 319
              S IKVIDFGS+ YE       + +R YRAPEVILG  +  P D+WS+GCIL EL TG
Sbjct: 236 QGRSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295

Query: 320 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG----------A 369
             L    +  + LA M  +LG   Q +L    R       +G   +              
Sbjct: 296 YPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLN 355

Query: 370 ASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
             R     +   P  +                 L+  L +DP  R+T  +ALRHP+  R
Sbjct: 356 GGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score =  419 bits (1080), Expect = e-146
 Identities = 118/366 (32%), Positives = 183/366 (50%), Gaps = 43/366 (11%)

Query: 81  DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAA 140
           DD +  Y+   GE    RY+I S +G+G+FGQV++ +DR  +E VAIKI++  K +   A
Sbjct: 38  DDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQA 97

Query: 141 MIEIEVLQQLAKHDKGG-NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPID 199
            IE+ +L+ + KHD       V ++  F +RNH+C+VFE L  +LYD LR  N+R   ++
Sbjct: 98  QIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLN 157

Query: 200 LVREIARQLLECIAFMH--DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK 257
           L R+ A+Q+   + F+   +L +IH DLKPEN+LL +                       
Sbjct: 158 LTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCN----------------------- 194

Query: 258 RMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 317
             PK SAIK++DFGS+          + +R YR+PEV+LG+ +    D+WS+GCILVE+ 
Sbjct: 195 --PKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMH 252

Query: 318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS 377
           TGE LF     ++ +  +  VLG  P H+L +  +  + + +     W          + 
Sbjct: 253 TGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREY 312

Query: 378 VMKLPR-LQNLIMQHVDHSAG--------------DLTHLLQGLLRYDPTDRLTAREALR 422
                R L N++        G                  L+  +L YDP  R+    AL+
Sbjct: 313 KPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQ 372

Query: 423 HPFFTR 428
           H FF +
Sbjct: 373 HSFFKK 378

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score =  401 bits (1032), Expect = e-139
 Identities = 107/370 (28%), Positives = 175/370 (47%), Gaps = 52/370 (14%)

Query: 80  EDDKDGHYMFALGENLT-SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYRE 138
           +    G++    GE    +RY +  K+G G F  V    D      VA+KIVRG K Y E
Sbjct: 1   DYRPGGYHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTE 60

Query: 139 AAMIEIEVLQQLAKHDK------GGNRCVQIRNWFDYRN----HICIVFEKLGSSLYDFL 188
           AA  EI++LQ++   D       G N  +++ + F+++     H+ +VFE LG +L   +
Sbjct: 61  AAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALI 120

Query: 189 RKNNYRSFPIDLVREIARQLLECIAFMHDLC-MIHTDLKPENVLLVSSEYIKVPDYKSSL 247
           +K  +R  P+  V++I++QLL  + +MH  C +IHTD+KPENVL+   +  +        
Sbjct: 121 KKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPE-------- 172

Query: 248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIW 307
                            IK+ D G+  +        + TR YR+PEV+LG  W    DIW
Sbjct: 173 -------------NLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIW 219

Query: 308 SVGCILVELCTGEALFQTHE------NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG 361
           S  C++ EL TG+ LF+  E      + +H+A +  +LG LP ++L+        +  RG
Sbjct: 220 STACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRG 279

Query: 362 RLDWPEGAASRESIKSVMKLPRLQNLIM---QHVDHSAGDLTHLLQGLLRYDPTDRLTAR 418
            L             S +K   L++++    +     A +++  L  +L+ DP  R  A 
Sbjct: 280 LLRN----------ISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG 329

Query: 419 EALRHPFFTR 428
             + HP+   
Sbjct: 330 GLVNHPWLKD 339

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score =  353 bits (906), Expect = e-119
 Identities = 106/389 (27%), Positives = 181/389 (46%), Gaps = 49/389 (12%)

Query: 77  PWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY 136
              +  K G+++  +G+    RY +  K+G G F  V   WD + K+ VA+K+V+  + Y
Sbjct: 17  DPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHY 76

Query: 137 REAAMIEIEVLQQLAKHDK---GGNRCVQIRNWFDYR----NHICIVFEKLGSSLYDFLR 189
            E A+ EI +L+ +   D         VQ+ + F        HIC+VFE LG  L  ++ 
Sbjct: 77  TETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWII 136

Query: 190 KNNYRSFPIDLVREIARQLLECIAFMHDLC-MIHTDLKPENVLLVSSEY----------- 237
           K+NY+  P+  V++I +Q+L+ + ++H  C +IHTD+KPEN+LL  +E            
Sbjct: 137 KSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATE 196

Query: 238 -----------IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVST 286
                        V    ++      +    +  +   +K+ D G+  +        + T
Sbjct: 197 WQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQT 256

Query: 287 RHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE------HLAMMERVLG 340
           R YR+ EV++G G+  P DIWS  C+  EL TG+ LF+ H   E      H+A++  +LG
Sbjct: 257 RQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLG 316

Query: 341 PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD-- 398
            +P+ ++       E + ++G L               +K   L  ++++  + S  +  
Sbjct: 317 KVPRKLIVAGKYSKEFFTKKGDLKHITK----------LKPWGLFEVLVEKYEWSQEEAA 366

Query: 399 -LTHLLQGLLRYDPTDRLTAREALRHPFF 426
             T  L  +L   P  R TA E LRHP+ 
Sbjct: 367 GFTDFLLPMLELIPEKRATAAECLRHPWL 395

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score =  186 bits (475), Expect = 5e-56
 Identities = 96/349 (27%), Positives = 157/349 (44%), Gaps = 74/349 (21%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVLQQLAKH 153
           +Y+   K+GEG++G V +C +R+  ++VAIK      +        A+ EI +L+QL KH
Sbjct: 4   KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFL-ESEDDPVIKKIALREIRMLKQL-KH 61

Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
               N  V +   F  +  + +VFE    ++   L +   R  P  LV+ I  Q L+ + 
Sbjct: 62  P---N-LVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVN 116

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-S 272
           F H    IH D+KPEN +L++                          K S IK+ DFG +
Sbjct: 117 FCHKHNCIHRDVKPEN-ILIT--------------------------KHSVIKLCDFGFA 149

Query: 273 TTYERPDQNY--IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHEN 328
                P   Y   V+TR YR+PE+++G    Y  P D+W++GC+  EL +G  L+    +
Sbjct: 150 RLLTGPSDYYDDEVATRWYRSPELLVG-DTQYGPPVDVWAIGCVFAELLSGVPLWPGKSD 208

Query: 329 LEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           ++ L ++ + LG  +P+H                         S     S +K+P  +++
Sbjct: 209 VDQLYLIRKTLGDLIPRH-------------------QQVF--STNQYFSGVKIPDPEDM 247

Query: 388 -----IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 431
                   ++ + A  L   L+G L  DPT+RLT  + L HP+F     
Sbjct: 248 EPLELKFPNISYPALGL---LKGCLHMDPTERLTCEQLLHHPYFENIRE 293

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score =  185 bits (471), Expect = 3e-55
 Identities = 88/351 (25%), Positives = 145/351 (41%), Gaps = 76/351 (21%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMIEIEVLQQLA 151
           +Y+    +GEG++G V++C +++   +VAIK          +KK    AM EI++L+QL 
Sbjct: 26  KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKK---IAMREIKLLKQL- 81

Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
           +H+   N  V +      +    +VFE +  ++ D L           +V++   Q++  
Sbjct: 82  RHE---N-LVNLLEVCKKKKRWYLVFEFVDHTILDDLELFP-NGLDYQVVQKYLFQIING 136

Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           I F H   +IH D+KPEN +LVS                          +S  +K+ DFG
Sbjct: 137 IGFCHSHNIIHRDIKPEN-ILVS--------------------------QSGVVKLCDFG 169

Query: 272 -STTYERPDQNY--IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTH 326
            + T   P + Y   V+TR YRAPE+++G    Y    D+W++GC++ E+  GE LF   
Sbjct: 170 FARTLAAPGEVYDDEVATRWYRAPELLVG-DVKYGKAVDVWAIGCLVTEMFMGEPLFPGD 228

Query: 327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 386
            +++ L  +   LG L                            +       ++LP ++ 
Sbjct: 229 SDIDQLYHIMMCLGNLIPR------------------HQELFNKNPVFAG--VRLPEIKE 268

Query: 387 L-----IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 432
                     +     DL    +  L  DP  R    E L H FF  D   
Sbjct: 269 REPLERRYPKLSEVVIDL---AKKCLHIDPDKRPFCAELLHHDFFQMDGFA 316

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score =  174 bits (444), Expect = 1e-50
 Identities = 97/361 (26%), Positives = 155/361 (42%), Gaps = 86/361 (23%)

Query: 92  GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY--REAAMIEIEVLQQ 149
           GE     Y     +G G+FG V +    E  E VAIK V   K++  RE     +++++ 
Sbjct: 35  GEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNRE-----LQIMRI 88

Query: 150 LAKHDKGGNRCVQIRNWF------DYRNHICIVFEKLGSSLYDFLR--KNNYRSFPIDLV 201
           + KH    N  V ++ +F           + +V E +  ++Y   R      ++ P+ L+
Sbjct: 89  V-KHP---N-VVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLI 143

Query: 202 REIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPK 261
           +    QLL  +A++H + + H D+KP+N+LL                           P 
Sbjct: 144 KLYMYQLLRSLAYIHSIGICHRDIKPQNLLL--------------------------DPP 177

Query: 262 SSAIKVIDFGSTTYERPDQNYI--VSTRHYRAPEVILGLGWTY---PCDIWSVGCILVEL 316
           S  +K+IDFGS       +  +  + +R+YRAPE+I G   T      DIWS GC++ EL
Sbjct: 178 SGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFG--ATNYTTNIDIWSTGCVMAEL 235

Query: 317 CTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIK 376
             G+ LF     ++ L  + +VLG   +  +K ++ +  ++                   
Sbjct: 236 MQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEH------------------- 276

Query: 377 SVMKLPR-----LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 431
              K P+        +        A DL   +  LL Y P+ RLTA EAL HPFF  D L
Sbjct: 277 ---KFPQIRPHPFSKVFRPRTPPDAIDL---ISRLLEYTPSARLTAIEALCHPFF--DEL 328

Query: 432 R 432
           R
Sbjct: 329 R 329

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score =  172 bits (439), Expect = 2e-50
 Identities = 88/353 (24%), Positives = 151/353 (42%), Gaps = 85/353 (24%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYRE----AAMIEIEVLQQLAK 152
            RY+  +K+GEGT+G+V +  D    E VAIK +R ++   E     A+ E+ +L++L +
Sbjct: 34  DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIR-LEHEEEGVPGTAIREVSLLKEL-Q 91

Query: 153 HDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
           H    N  +++++   + + + ++FE   + L  ++ KN      + +++    QL+  +
Sbjct: 92  HR---N-IIELKSVIHHNHRLHLIFEYAENDLKKYMDKN--PDVSMRVIKSFLYQLINGV 145

Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG- 271
            F H    +H DLKP+N LL+S                          ++  +K+ DFG 
Sbjct: 146 NFCHSRRCLHRDLKPQN-LLLSVS---------------------DASETPVLKIGDFGL 183

Query: 272 STTYERPDQNY--IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHE 327
           +  +  P + +   + T  YR PE++LG    Y    DIWS+ CI  E+     LF    
Sbjct: 184 ARAFGIPIRQFTHEIITLWYRPPEILLG-SRHYSTSVDIWSIACIWAEMLMKTPLFPGDS 242

Query: 328 NLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP---- 382
            ++ L  +  VLG P                       WP           V  LP    
Sbjct: 243 EIDQLFKIFEVLGLPDDT-------------------TWPG----------VTALPDWKQ 273

Query: 383 --------RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
                    L+ ++   +D    D   LL  +L  DP  R++A+ AL HP+F+
Sbjct: 274 SFPKFRGKTLKRVLGALLDDEGLD---LLTAMLEMDPVKRISAKNALEHPYFS 323

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score =  174 bits (444), Expect = 3e-50
 Identities = 87/355 (24%), Positives = 149/355 (41%), Gaps = 81/355 (22%)

Query: 96  TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY--REAAMIEIEVLQQLAKH 153
              Y     +G G+FG V +    +  E+VAIK V   K++  RE     ++++++L  H
Sbjct: 53  EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKL-DH 106

Query: 154 DKGGNRCVQIRNWF------DYRNHICIVFEKLGSSLYDFLRKNNYRS--FPIDLVREIA 205
               N  V++R +F          ++ +V + +  ++Y   R  +      P+  V+   
Sbjct: 107 C---N-IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 162

Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 265
            QL   +A++H   + H D+KP+N+LL                   D       P ++ +
Sbjct: 163 YQLFRSLAYIHSFGICHRDIKPQNLLL-------------------D-------PDTAVL 196

Query: 266 KVIDFGSTTYERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEAL 322
           K+ DFGS       +  +  + +R+YRAPE+I G   +T   D+WS GC+L EL  G+ +
Sbjct: 197 KLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 256

Query: 323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP 382
           F     ++ L  + +VLG   +  ++ ++ +  ++                      K P
Sbjct: 257 FPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEF----------------------KFP 294

Query: 383 R-----LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 432
           +        +        A  L      LL Y PT RLT  EA  H FF  D LR
Sbjct: 295 QIKAHPWTKVFRPRTPPEAIAL---CSRLLEYTPTARLTPLEACAHSFF--DELR 344

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  170 bits (433), Expect = 7e-50
 Identities = 68/352 (19%), Positives = 129/352 (36%), Gaps = 99/352 (28%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHD 154
            Y I  ++G G   +V +  + + K++ AIK V       +  ++   EI  L +L +  
Sbjct: 29  IYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL-QQ- 85

Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
              ++ +++ ++     +I +V E     L  +L+K   +S      +   + +LE +  
Sbjct: 86  -HSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHT 142

Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H   ++H+DLKP N L+V                               +K+IDFG   
Sbjct: 143 IHQHGIVHSDLKPANFLIVDGM----------------------------LKLIDFGIAN 174

Query: 275 YERPDQNYIVS-----TRHYRAPEVILGLGW-----------TYPCDIWSVGCILVELCT 318
             +PD   +V      T +Y  PE I  +             +   D+WS+GCIL  +  
Sbjct: 175 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 234

Query: 319 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSV 378
           G+  FQ   N   ++ +  ++ P                     +++P+           
Sbjct: 235 GKTPFQQIIN--QISKLHAIIDP------------------NHEIEFPD----------- 263

Query: 379 MKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
                         +    D   +L+  L+ DP  R++  E L HP+     
Sbjct: 264 ------------IPEKDLQD---VLKCCLKRDPKQRISIPELLAHPYVQIQT 300

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score =  170 bits (433), Expect = 8e-50
 Identities = 92/364 (25%), Positives = 151/364 (41%), Gaps = 88/364 (24%)

Query: 91  LGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR------GIKKYREAAMIEI 144
           LG   TSRY+  +++G G +G V +  D      VA+K VR      G      + + E+
Sbjct: 3   LGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREV 62

Query: 145 EVLQQL--AKHDKGGN----RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPI 198
            +L++L   +H    N      V   +  D    + +VFE +   L  +L K      P 
Sbjct: 63  ALLRRLEAFEHP---NVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPA 119

Query: 199 DLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKR 258
           + ++++ RQ L  + F+H  C++H DLKPEN +LV+S                       
Sbjct: 120 ETIKDLMRQFLRGLDFLHANCIVHRDLKPEN-ILVTSG---------------------- 156

Query: 259 MPKSSAIKVIDFG-STTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE 315
                 +K+ DFG +  Y         +V T  YRAPEV+L   +  P D+WSVGCI  E
Sbjct: 157 ----GTVKLADFGLARIYSYQ-MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAE 211

Query: 316 LCTGEALFQTHENLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRES 374
           +   + LF  +   + L  +  ++G P                      DWP        
Sbjct: 212 MFRRKPLFCGNSEADQLGKIFDLIGLPPED-------------------DWPR------- 245

Query: 375 IKSVMKLPRL-------QNL--IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 425
               + LPR        + +  ++  ++ S      LL  +L ++P  R++A  AL+H +
Sbjct: 246 ---DVSLPRGAFPPRGPRPVQSVVPEMEESGAQ---LLLEMLTFNPHKRISAFRALQHSY 299

Query: 426 FTRD 429
             +D
Sbjct: 300 LHKD 303

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  168 bits (428), Expect = 9e-49
 Identities = 69/354 (19%), Positives = 130/354 (36%), Gaps = 103/354 (29%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-----EIEVLQQLAK 152
            Y I  ++G G   +V +  + E+K++ AIK V    +  +   +     EI  L +L +
Sbjct: 10  IYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVN--LEEADNQTLDSYRNEIAYLNKL-Q 65

Query: 153 HDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
                ++ +++ ++     +I +V E     L  +L+K   +S      +   + +LE +
Sbjct: 66  Q--HSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAV 121

Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
             +H   ++H+DLKP N L+V                               +K+IDFG 
Sbjct: 122 HTIHQHGIVHSDLKPANFLIVDGM----------------------------LKLIDFGI 153

Query: 273 TTYERPDQNYI-----VSTRHYRAPEVILGLG-----------WTYPCDIWSVGCILVEL 316
               +PD   +     V T +Y  PE I  +             +   D+WS+GCIL  +
Sbjct: 154 ANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM 213

Query: 317 CTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIK 376
             G+  FQ   N   ++ +  ++ P                     +++P+         
Sbjct: 214 TYGKTPFQQIIN--QISKLHAIIDP------------------NHEIEFPD--------- 244

Query: 377 SVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
                           +    D   +L+  L+ DP  R++  E L HP+     
Sbjct: 245 --------------IPEKDLQD---VLKCCLKRDPKQRISIPELLAHPYVQIQT 281

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score =  166 bits (424), Expect = 1e-48
 Identities = 94/343 (27%), Positives = 152/343 (44%), Gaps = 71/343 (20%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYRE----AAMIEIEVLQQLAKH 153
           +Y+   K+GEGT+G V +  +RE  E+VA+K VR +    E    +A+ EI +L++L KH
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVR-LDDDDEGVPSSALREICLLKEL-KH 60

Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
               N  V++ +       + +VFE     L  +    N      ++V+    QLL+ + 
Sbjct: 61  K---N-IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLG 115

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-S 272
           F H   ++H DLKP+N LL++                              +K+ +FG +
Sbjct: 116 FCHSRNVLHRDLKPQN-LLINRN--------------------------GELKLANFGLA 148

Query: 273 TTYERPDQNY--IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCT-GEALFQTHE 327
             +  P + Y   V T  YR P+V+ G    Y    D+WS GCI  EL   G  LF  ++
Sbjct: 149 RAFGIPVRCYSAEVVTLWYRPPDVLFG-AKLYSTSIDMWSAGCIFAELANAGRPLFPGND 207

Query: 328 NLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 386
             + L  + R+LG P  +                    WP         K     P   +
Sbjct: 208 VDDQLKRIFRLLGTPTEE-------------------QWP-SMTKLPDYKPYPMYPATTS 247

Query: 387 L--IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
           L  ++  ++ +  DL   LQ LL+ +P  R++A EAL+HP+F+
Sbjct: 248 LVNVVPKLNATGRDL---LQNLLKCNPVQRISAEEALQHPYFS 287

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score =  167 bits (425), Expect = 2e-48
 Identities = 79/346 (22%), Positives = 147/346 (42%), Gaps = 60/346 (17%)

Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKH 153
                Y++  K+G G + +V E  +    E V +KI++ +KK +     EI++L+ L   
Sbjct: 33  GNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK--IKREIKILENLRGG 90

Query: 154 DKGGNRCVQIRNWF--DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
               N  + + +           +VFE + ++  DF  K  Y++     +R    ++L+ 
Sbjct: 91  P---N-IITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKA 142

Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           + + H + ++H D+KP NV++                   D  + K       +++ID+G
Sbjct: 143 LDYCHSMGIMHRDVKPHNVMI-------------------DHEHRK-------LRLIDWG 176

Query: 272 STTYERPDQNYI--VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTG-EALFQTHE 327
              +  P Q Y   V++R+++ PE+++    + Y  D+WS+GC+L  +    E  F  H+
Sbjct: 177 LAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 236

Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR--LQ 385
           N + L  + +VLG                Y+ +  ++             + +  R   +
Sbjct: 237 NYDQLVRIAKVLGT-ED---------LYDYIDKYNIELD-----PRFNDILGRHSRKRWE 281

Query: 386 NLIMQHVDHSAGDLT-HLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
             +     H         L  LLRYD   RLTAREA+ HP+F    
Sbjct: 282 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 327

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score =  166 bits (422), Expect = 2e-48
 Identities = 92/342 (26%), Positives = 143/342 (41%), Gaps = 71/342 (20%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYRE----AAMIEIEVLQQLAKH 153
           +Y    K+GEGT+G V +  +    E  A+K +R ++K  E      + EI +L++L KH
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIR-LEKEDEGIPSTTIREISILKEL-KH 59

Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
               N  V++ +    +  + +VFE L   L   L             +    QLL  IA
Sbjct: 60  S---N-IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIA 114

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-S 272
           + HD  ++H DLKP+N LL++ E                            +K+ DFG +
Sbjct: 115 YCHDRRVLHRDLKPQN-LLINRE--------------------------GELKIADFGLA 147

Query: 273 TTYERPDQNY--IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHEN 328
             +  P + Y   + T  YRAP+V++G    Y    DIWSVGCI  E+  G  LF     
Sbjct: 148 RAFGIPVRKYTHEIVTLWYRAPDVLMG-SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE 206

Query: 329 LEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
            + L  + R+LG P  +                   +WP              +      
Sbjct: 207 ADQLMRIFRILGTPNSK-------------------NWP-NVTELPKYDPNFTVYEPLPW 246

Query: 388 --IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
              ++ +D S  D   LL  +L+ DP  R+TA++AL H +F 
Sbjct: 247 ESFLKGLDESGID---LLSKMLKLDPNQRITAKQALEHAYFK 285

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score =  164 bits (418), Expect = 1e-47
 Identities = 92/348 (26%), Positives = 153/348 (43%), Gaps = 70/348 (20%)

Query: 92  GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYRE----AAMIEIEVL 147
            + L  +Y+   K+GEGT+G V +  D  +  +VA+K +R +    E     A+ EI +L
Sbjct: 16  FQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIR-LDAEDEGIPSTAIREISLL 73

Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQ 207
           ++L  H    N  V + +       + +VFE +   L   L +N         ++    Q
Sbjct: 74  KEL-HHP---N-IVSLIDVIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQ 127

Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           LL  +A  H   ++H DLKP+N LL++S+                           A+K+
Sbjct: 128 LLRGVAHCHQHRILHRDLKPQN-LLINSD--------------------------GALKL 160

Query: 268 IDFG-STTYERPDQNY--IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEAL 322
            DFG +  +  P ++Y   V T  YRAP+V++G    Y    DIWS+GCI  E+ TG+ L
Sbjct: 161 ADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG-SKKYSTSVDIWSIGCIFAEMITGKPL 219

Query: 323 FQTHENLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL 381
           F    + + L  +  +LG P P+                   +WP+        +   ++
Sbjct: 220 FPGVTDDDQLPKIFSILGTPNPR-------------------EWPQVQELPLWKQRTFQV 260

Query: 382 PRLQNL--IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
              +    I+        D   LL  +L +DP  R++AR+A+ HP+F 
Sbjct: 261 FEKKPWSSIIPGFCQEGID---LLSNMLCFDPNKRISARDAMNHPYFK 305

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  165 bits (420), Expect = 3e-47
 Identities = 78/402 (19%), Positives = 143/402 (35%), Gaps = 99/402 (24%)

Query: 48  TSFAPPRAPSDHVTSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGE 107
           +S   PR      T+++ F +    +      +DDK               Y I  ++G 
Sbjct: 7   SSGLVPRGSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSILKQIGS 66

Query: 108 GTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR 164
           G   +V +  + + K++ AIK V       +  ++   EI  L +L +H     + +++ 
Sbjct: 67  GGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD---KIIRLY 122

Query: 165 NWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTD 224
           ++     +I +V E     L  +L+K   +S      +   + +LE +  +H   ++H+D
Sbjct: 123 DYEITDQYIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSD 180

Query: 225 LKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIV 284
           LKP N L+V                               +K+IDFG     +PD   +V
Sbjct: 181 LKPANFLIVDGM----------------------------LKLIDFGIANQMQPDTTSVV 212

Query: 285 S-----TRHYRAPEVILGLGW-----------TYPCDIWSVGCILVELCTGEALFQTHEN 328
                   +Y  PE I  +             +   D+WS+GCIL  +  G+  FQ   N
Sbjct: 213 KDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 272

Query: 329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 388
              ++ +  ++ P                     +++P                      
Sbjct: 273 --QISKLHAIIDP------------------NHEIEFP---------------------- 290

Query: 389 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
               D    DL  +L+  L+ DP  R++  E L HP+     
Sbjct: 291 ----DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 328

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score =  163 bits (416), Expect = 4e-47
 Identities = 92/355 (25%), Positives = 150/355 (42%), Gaps = 88/355 (24%)

Query: 97  SRYKIHSKMGEGTFGQVLECWD-RERKEMVAIKIVRGIKKYRE----AAMIEIEVLQQL- 150
            +Y+  +++GEG +G+V +  D +     VA+K VR ++   E    + + E+ VL+ L 
Sbjct: 11  QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR-VQTGEEGMPLSTIREVAVLRHLE 69

Query: 151 -AKHDKGGN----RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIA 205
             +H    N      V   +  D    + +VFE +   L  +L K      P + ++++ 
Sbjct: 70  TFEHP---NVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMM 126

Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 265
            QLL  + F+H   ++H DLKP+N +LV+S                             I
Sbjct: 127 FQLLRGLDFLHSHRVVHRDLKPQN-ILVTSS--------------------------GQI 159

Query: 266 KVIDFG-STTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL 322
           K+ DFG +  Y         +V T  YRAPEV+L   +  P D+WSVGCI  E+   + L
Sbjct: 160 KLADFGLARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPL 218

Query: 323 FQTHENLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL 381
           F+   +++ L  +  V+G P  +                   DWP            + L
Sbjct: 219 FRGSSDVDQLGKILDVIGLPGEE-------------------DWPR----------DVAL 249

Query: 382 PRL-------QNL--IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
           PR        Q +   +  +D    D   LL   L ++P  R++A  AL HP+F 
Sbjct: 250 PRQAFHSKSAQPIEKFVTDIDELGKD---LLLKCLTFNPAKRISAYSALSHPYFQ 301

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score =  161 bits (411), Expect = 1e-46
 Identities = 93/350 (26%), Positives = 154/350 (44%), Gaps = 75/350 (21%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR-----GIKKYREAAMIEIEVLQQLA 151
           S++K   K+G GT+  V +  ++     VA+K V+     G       A+ EI ++++L 
Sbjct: 5   SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPS---TAIREISLMKEL- 60

Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNY----RSFPIDLVREIARQ 207
           KH+   N  V++ +     N + +VFE + + L  ++         R   ++LV+    Q
Sbjct: 61  KHE---N-IVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQ 116

Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           LL+ +AF H+  ++H DLKP+N LL++                          K   +K+
Sbjct: 117 LLQGLAFCHENKILHRDLKPQN-LLIN--------------------------KRGQLKL 149

Query: 268 IDFG-STTYERPDQNY--IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEAL 322
            DFG +  +  P   +   V T  YRAP+V++G   TY    DIWS GCIL E+ TG+ L
Sbjct: 150 GDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMG-SRTYSTSIDIWSCGCILAEMITGKPL 208

Query: 323 FQTHENLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL 381
           F    + E L ++  ++G P                       WP            ++ 
Sbjct: 209 FPGTNDEEQLKLIFDIMGTPNES-------------------LWP-SVTKLPKYNPNIQQ 248

Query: 382 PRLQNLIMQHVDHSAGDLT----HLLQGLLRYDPTDRLTAREALRHPFFT 427
              ++L      H+   L       L GLL+ +P  RL+A++AL HP+F 
Sbjct: 249 RPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFA 298

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score =  161 bits (409), Expect = 4e-46
 Identities = 89/341 (26%), Positives = 140/341 (41%), Gaps = 68/341 (19%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR-----GIKKYREAAMIEIEVLQQLAK 152
            Y    K+GEGT+  V +   +    +VA+K +R     G       A+ E+ +L+ L K
Sbjct: 3   TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPC---TAIREVSLLKDL-K 58

Query: 153 HDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
           H    N  V + +       + +VFE L   L  +L         +  V+    QLL  +
Sbjct: 59  HA---N-IVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCG-NIINMHNVKLFLFQLLRGL 113

Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG- 271
           A+ H   ++H DLKP+N LL++                          +   +K+ DFG 
Sbjct: 114 AYCHRQKVLHRDLKPQN-LLIN--------------------------ERGELKLADFGL 146

Query: 272 STTYERPDQNY--IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQTHE 327
           +     P + Y   V T  YR P+++LG    Y    D+W VGCI  E+ TG  LF    
Sbjct: 147 ARAKSIPTKTYDNEVVTLWYRPPDILLG-STDYSTQIDMWGVGCIFYEMATGRPLFPGST 205

Query: 328 NLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 386
             E L  + R+LG P  +                    WP   ++ E         R + 
Sbjct: 206 VEEQLHFIFRILGTPTEE-------------------TWPGILSNEEFKTYNYPKYRAEA 246

Query: 387 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
           L+  H      D   LL  LL+++  +R++A +A++HPFF 
Sbjct: 247 LL-SHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFL 286

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score =  160 bits (407), Expect = 1e-45
 Identities = 92/355 (25%), Positives = 149/355 (41%), Gaps = 66/355 (18%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAK 152
                R+++    G+GTFG V    ++     VAIK V    ++      E++++Q L  
Sbjct: 19  RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF---RNRELQIMQDL-A 74

Query: 153 HDKGGNRCVQIRNWF-----DYRNHIC--IVFEKLGSSLYDFLRKNNYR--SFPIDLVRE 203
                N  VQ++++F       R  I   +V E +  +L+   R    R  + P  L++ 
Sbjct: 75  VLHHPN-IVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKV 133

Query: 204 IARQLLECIAFMHDLCM--IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPK 261
              QL+  I  +H   +   H D+KP NVL+                   +         
Sbjct: 134 FLFQLIRSIGCLHLPSVNVCHRDIKPHNVLV-------------------N-------EA 167

Query: 262 SSAIKVIDFGSTTYERPDQNYI--VSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCT 318
              +K+ DFGS     P +  +  + +R+YRAPE+I G   +T   DIWSVGCI  E+  
Sbjct: 168 DGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMML 227

Query: 319 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVD-RHAEKYVRRGRLDWPEGAASRESIKS 377
           GE +F+   +   L  + RVLG   + +L++++  H +  +                   
Sbjct: 228 GEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYN----------------- 270

Query: 378 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 432
             K     N+   H    A +   LL  LL+Y P +R+   EAL HP+F  D L 
Sbjct: 271 -SKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYF--DELH 322

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score =  158 bits (401), Expect = 8e-45
 Identities = 84/350 (24%), Positives = 148/350 (42%), Gaps = 82/350 (23%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYRE----AAMIEIEVLQQL 150
            RY+    +GEG F  V +  D+   ++VAIK ++     + ++     A+ EI++LQ+L
Sbjct: 10  KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL 69

Query: 151 AKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
             H    N  + + + F ++++I +VF+ + + L   + K+N        ++      L+
Sbjct: 70  -SHP---N-IIGLLDAFGHKSNISLVFDFMETDLEVII-KDNSLVLTPSHIKAYMLMTLQ 123

Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++H   ++H DLKP N LL+                               +K+ DF
Sbjct: 124 GLEYLHQHWILHRDLKPNN-LLLDEN--------------------------GVLKLADF 156

Query: 271 G-STTYERPDQNY--IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEALFQT 325
           G + ++  P++ Y   V TR YRAPE++ G    Y    D+W+VGCIL EL         
Sbjct: 157 GLAKSFGSPNRAYTHQVVTRWYRAPELLFG-ARMYGVGVDMWAVGCILAELLLRVPFLPG 215

Query: 326 HENLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL 384
             +L+ L  +   LG P  +                    WP+          +  LP  
Sbjct: 216 DSDLDQLTRIFETLGTPTEE-------------------QWPD----------MCSLPDY 246

Query: 385 QNL-------IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
                     +      +  DL  L+QGL  ++P  R+TA +AL+  +F+
Sbjct: 247 VTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFS 296

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score =  156 bits (396), Expect = 2e-44
 Identities = 76/364 (20%), Positives = 135/364 (37%), Gaps = 85/364 (23%)

Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIK------IVRGIKKYREAAMIEIEVL 147
           +L SRY     +G G  G V    D +  + VAIK              RE     I+++
Sbjct: 8   DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALRE-----IKII 62

Query: 148 QQLAKHD----------KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFP 197
           ++L  HD            G++           N + IV E + + L + L +       
Sbjct: 63  RRL-DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLE-- 119

Query: 198 IDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK 257
            +  R    QLL  + ++H   ++H DLKP N+ + + +                     
Sbjct: 120 -EHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDL-------------------- 158

Query: 258 RMPKSSAIKVIDFG---STTYERPDQNYI---VSTRHYRAPEVILGL-GWTYPCDIWSVG 310
                  +K+ DFG           + ++   + T+ YR+P ++L    +T   D+W+ G
Sbjct: 159 ------VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAG 212

Query: 311 CILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVR----RGRLDWP 366
           CI  E+ TG+ LF     LE + ++   +  + +   + +      Y+R           
Sbjct: 213 CIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLT 272

Query: 367 EGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
           +                    ++  +   A D    L+ +L + P DRLTA EAL HP+ 
Sbjct: 273 Q--------------------LLPGISREAVD---FLEQILTFSPMDRLTAEEALSHPYM 309

Query: 427 TRDH 430
           +   
Sbjct: 310 SIYS 313

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score =  157 bits (400), Expect = 2e-44
 Identities = 85/375 (22%), Positives = 156/375 (41%), Gaps = 83/375 (22%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY--RE------------ 138
           E  + +Y +   +G G+FG V E +D E  +  A+K V    +Y  RE            
Sbjct: 3   ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNI 62

Query: 139 ----------------AAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGS 182
                                 +  +   K++   N    +        ++ ++ E +  
Sbjct: 63  IKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD 122

Query: 183 SLYDFLR--KNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKV 240
           +L+  L+    + RS P++L+     QL   + F+H L + H D+KP+N+L+        
Sbjct: 123 TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLV-------- 174

Query: 241 PDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYI--VSTRHYRAPEVILG- 297
                      +        K + +K+ DFGS     P +  +  + +R YRAPE++LG 
Sbjct: 175 -----------N-------SKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGA 216

Query: 298 LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKY 357
             +T   D+WS+GC+  EL  G+ LF    +++ L  + +++G   +  + R++ H    
Sbjct: 217 TEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPH---- 272

Query: 358 VRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA 417
                        +     ++      + ++ +     A D   LL+ +LRY+P  R+  
Sbjct: 273 ------------YTEVRFPTLKAKD-WRKILPEGTPSLAID---LLEQILRYEPDLRINP 316

Query: 418 REALRHPFFTRDHLR 432
            EA+ HPFF  DHLR
Sbjct: 317 YEAMAHPFF--DHLR 329

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  155 bits (394), Expect = 3e-44
 Identities = 68/345 (19%), Positives = 123/345 (35%), Gaps = 76/345 (22%)

Query: 96  TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD- 154
            S ++  + +G+G FGQV++  +       AIK +R  ++     + E+ +L  L  H  
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL-NHQY 63

Query: 155 --------KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIA 205
                         V+       ++ + I  E     +LYD +   N  +   D    + 
Sbjct: 64  VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLF 122

Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF---KRMPKS 262
           RQ+LE ++++H   +IH DLKP N+ +  S  +K+ D             F   K + +S
Sbjct: 123 RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGD-------------FGLAKNVHRS 169

Query: 263 SAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEA 321
             I  +D  +      +    + T  Y A EV+ G G      D++S+G I  E+     
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP-- 227

Query: 322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL 381
            F T     ++                       K +R   +++P      +        
Sbjct: 228 -FSTGMERVNIL----------------------KKLRSVSIEFPPDFDDNKM------- 257

Query: 382 PRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
              + +I                 L+ +DP  R  AR  L   + 
Sbjct: 258 KVEKKIIRL---------------LIDHDPNKRPGARTLLNSGWL 287

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  155 bits (394), Expect = 3e-44
 Identities = 65/382 (17%), Positives = 114/382 (29%), Gaps = 103/382 (26%)

Query: 52  PPRAPSDHVTSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFG 111
            PR  S    +S           SP +     +  +           ++  S++G G++G
Sbjct: 27  QPRRVSFRGEASETLQ-------SPGYDPSRPESFFQ--------QSFQRLSRLGHGSYG 71

Query: 112 QVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD 168
           +V +   +E   + A+K         K R   + E+   +++ +H      CV++   ++
Sbjct: 72  EVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHP----CCVRLEQAWE 127

Query: 169 YRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPE 228
               + +  E  G SL          S P   V    R  L  +A +H   ++H D+KP 
Sbjct: 128 EGGILYLQTELCGPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPA 186

Query: 229 NVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPDQNY-IVST 286
           N+ L                                 K+ DFG                 
Sbjct: 187 NIFL---------------------------GPRGRCKLGDFGLLVELGTAGAGEVQEGD 219

Query: 287 RHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHM 346
             Y APE++ G  +    D++S+G  ++E+     L    E  + L     +       +
Sbjct: 220 PRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQL-RQGYLPPEFTAGL 277

Query: 347 LKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL 406
                                   S E                         L  +L  +
Sbjct: 278 ------------------------SSE-------------------------LRSVLVMM 288

Query: 407 LRYDPTDRLTAREALRHPFFTR 428
           L  DP  R TA   L  P   +
Sbjct: 289 LEPDPKLRATAEALLALPVLRQ 310

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  156 bits (396), Expect = 4e-44
 Identities = 71/341 (20%), Positives = 124/341 (36%), Gaps = 78/341 (22%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAK 152
              T  Y++   +G G++     C  +      A+KI   I K +     EIE+L +  +
Sbjct: 18  IQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKI---IDKSKRDPTEEIEILLRYGQ 74

Query: 153 HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
           H    N  + +++ +D   ++ +V E + G  L D + +   + F       +   + + 
Sbjct: 75  HP---N-IITLKDVYDDGKYVYVVTELMKGGELLDKILRQ--KFFSEREASAVLFTITKT 128

Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           + ++H   ++H DLKP N+L V                              +I++ DFG
Sbjct: 129 VEYLHAQGVVHRDLKPSNILYVDES-----------------------GNPESIRICDFG 165

Query: 272 STTYERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 328
                R +         T ++ APEV+   G+   CDIWS+G +L  + TG   F    +
Sbjct: 166 FAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD 225

Query: 329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 388
                ++ R+                      G+     G  +                 
Sbjct: 226 DTPEEILARIG--------------------SGKFSLSGGYWN----------------- 248

Query: 389 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
              V  +A D   L+  +L  DP  RLTA   LRHP+    
Sbjct: 249 --SVSDTAKD---LVSKMLHVDPHQRLTAALVLRHPWIVHW 284

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score =  156 bits (397), Expect = 7e-44
 Identities = 86/349 (24%), Positives = 162/349 (46%), Gaps = 30/349 (8%)

Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREAAMI--EIEVLQQL 150
           ++  +Y++  K+G+G +G V +  DR   E+VA+K I    +   +A     EI +L +L
Sbjct: 6   HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTEL 65

Query: 151 AKHDKGGNRCVQIRNWF--DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQL 208
           + H+   N  V + N    D    + +VF+ + + L+  +R N          + +  QL
Sbjct: 66  SGHE---N-IVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEP---VHKQYVVYQL 118

Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY-----KSSLHTPKDSSYFKRMPKSS 263
           ++ I ++H   ++H D+KP N+LL +  ++KV D+       ++    ++        + 
Sbjct: 119 IKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTE 178

Query: 264 AIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEAL 322
                    T Y        V+TR YRAPE++LG   +T   D+WS+GCIL E+  G+ +
Sbjct: 179 NFDDDQPILTDY--------VATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPI 230

Query: 323 FQTHENLEHLAMMERVLGPLPQHMLKRVD-RHAEKYVRRGRLDWPEGAASRESIKSVMKL 381
           F     +  L  +  V+       ++ +    A+  +   +       +++  I +  K 
Sbjct: 231 FPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKN 290

Query: 382 PRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
             L+       +  A D   LL  LL+++P  R++A +AL+HPF +  H
Sbjct: 291 LLLKINPKADCNEEALD---LLDKLLQFNPNKRISANDALKHPFVSIFH 336

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  157 bits (399), Expect = 9e-44
 Identities = 68/360 (18%), Positives = 131/360 (36%), Gaps = 85/360 (23%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAK 152
           ++L +       +G G+ G V+      +   VA+K +     + + A++EI++L +   
Sbjct: 11  QSLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRML--IDFCDIALMEIKLLTESDD 67

Query: 153 HDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVRE-----IARQ 207
           H       ++          + I  E    +L D +   N     + L +E     + RQ
Sbjct: 68  H----PNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQ 123

Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           +   +A +H L +IH DLKP+N+L+ +S               + ++  +   ++  I +
Sbjct: 124 IASGVAHLHSLKIIHRDLKPQNILVSTSS--------------RFTADQQTGAENLRILI 169

Query: 268 IDFGSTTYERPDQNYIVSTRH-------YRAPEVILGLGW-------TYPCDIWSVGCIL 313
            DFG        Q+   +  +       +RAPE++            T   DI+S+GC+ 
Sbjct: 170 SDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF 229

Query: 314 -VELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASR 372
              L  G+  F                                           + +   
Sbjct: 230 YYILSKGKHPF-----------------------------------------GDKYSRES 248

Query: 373 ESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 432
             I+ +  L  ++ L  + +   A D   L+  ++ +DP  R TA + LRHP F     +
Sbjct: 249 NIIRGIFSLDEMKCLHDRSLIAEATD---LISQMIDHDPLKRPTAMKVLRHPLFWPKSKK 305

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  157 bits (398), Expect = 3e-43
 Identities = 79/343 (23%), Positives = 142/343 (41%), Gaps = 83/343 (24%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI-EIEVLQQ 149
            +L+  Y+   K+G G +G+VL C D+      AIKI+    +     + ++ E+ VL+ 
Sbjct: 33  GHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKL 92

Query: 150 LAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL 208
           L  H    N  +++ ++F+ + +  +V E   G  L+D +       F       I +Q+
Sbjct: 93  L-DHP---N-IMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK--FNEVDAAVIIKQV 145

Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
           L  + ++H   ++H DLKPEN+LL S E                        K + IK++
Sbjct: 146 LSGVTYLHKHNIVHRDLKPENLLLESKE------------------------KDALIKIV 181

Query: 269 DFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
           DFG +      +     + T +Y APEV+    +   CD+WS+G IL  L  G   F   
Sbjct: 182 DFGLSAVFENQKKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQ 240

Query: 327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 386
            + E   ++ +V                     +G+  +                     
Sbjct: 241 TDQE---ILRKVE--------------------KGKYTFDSPE----------------- 260

Query: 387 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
              ++V   A D   L++ +L++D   R++A++AL HP+    
Sbjct: 261 --WKNVSEGAKD---LIKQMLQFDSQRRISAQQALEHPWIKEM 298

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  152 bits (386), Expect = 6e-43
 Identities = 66/341 (19%), Positives = 125/341 (36%), Gaps = 79/341 (23%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAK 152
           + L  +Y I   +G G FG V  C +   K+    K V+     +     EI +L    +
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIA-R 59

Query: 153 HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
           H       + +   F+    + ++FE + G  +++ +  + +       +     Q+ E 
Sbjct: 60  H----RNILHLHESFESMEELVMIFEFISGLDIFERINTSAF-ELNEREIVSYVHQVCEA 114

Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           + F+H   + H D++PEN++  +                          +SS IK+I+FG
Sbjct: 115 LQFLHSHNIGHFDIRPENIIYQT-------------------------RRSSTIKIIEFG 149

Query: 272 STTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 329
                +P  N+  + +   Y APEV      +   D+WS+G ++  L +G   F    N 
Sbjct: 150 QARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ 209

Query: 330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM 389
           +   ++E ++                         + E A                    
Sbjct: 210 Q---IIENIM--------------------NAEYTFDEEA-------------------F 227

Query: 390 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           + +   A D    +  LL  +   R+TA EAL+HP+  +  
Sbjct: 228 KEISIEAMD---FVDRLLVKERKSRMTASEALQHPWLKQKI 265

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  156 bits (395), Expect = 9e-43
 Identities = 84/344 (24%), Positives = 146/344 (42%), Gaps = 84/344 (24%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREAAMIEIEVLQ 148
              + RYK    +G+G+FG+V+ C D+   +  A+K++       K  +E+ + E+++L+
Sbjct: 22  AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 81

Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 207
           QL  H    N  +++  +F+ + +  +V E   G  L+D +       F       I RQ
Sbjct: 82  QL-DHP---N-IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR--FSEVDAARIIRQ 134

Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           +L  I +MH   ++H DLKPEN+LL S                          K + I++
Sbjct: 135 VLSGITYMHKNKIVHRDLKPENLLLESKS------------------------KDANIRI 170

Query: 268 IDFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 325
           IDFG +T+    +     + T +Y APEV+ G  +   CD+WS G IL  L +G   F  
Sbjct: 171 IDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNG 229

Query: 326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 385
               +   ++++V                     +G+  +                    
Sbjct: 230 ANEYD---ILKKVE--------------------KGKYTFELPQ---------------- 250

Query: 386 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
               + V  SA D   L++ +L Y P+ R++AR+AL H +    
Sbjct: 251 ---WKKVSESAKD---LIRKMLTYVPSMRISARDALDHEWIQTY 288

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  152 bits (385), Expect = 9e-43
 Identities = 80/343 (23%), Positives = 131/343 (38%), Gaps = 77/343 (22%)

Query: 94  NLTSRYKIHS---KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQL 150
                Y +      +GEG+F    +C  ++  +  A+KI+   K+       EI  L+  
Sbjct: 5   PFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIIS--KRMEANTQKEITALKLC 62

Query: 151 AKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLL 209
             H    N  V++   F  + H  +V E L G  L++  R    + F       I R+L+
Sbjct: 63  EGHP---N-IVKLHEVFHDQLHTFLVMELLNGGELFE--RIKKKKHFSETEASYIMRKLV 116

Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
             ++ MHD+ ++H DLKPEN+L                              +  IK+ID
Sbjct: 117 SAVSHMHDVGVVHRDLKPENLLFTDEN------------------------DNLEIKIID 152

Query: 270 FGSTTYERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
           FG    + PD         T HY APE++   G+   CD+WS+G IL  + +G+  FQ+H
Sbjct: 153 FGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSH 212

Query: 327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 386
           +          +       ++K+        +++G   +   A                 
Sbjct: 213 D--------RSLTCTSAVEIMKK--------IKKGDFSFEGEAWK--------------- 241

Query: 387 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
               +V   A D   L+QGLL  DP  RL       + +    
Sbjct: 242 ----NVSQEAKD---LIQGLLTVDPNKRLKMSGLRYNEWLQDG 277

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  151 bits (382), Expect = 2e-42
 Identities = 58/353 (16%), Positives = 112/353 (31%), Gaps = 66/353 (18%)

Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEVLQQLA 151
                + +   +G+G    V     ++  ++ AIK+       +  +  M E EVL++L 
Sbjct: 6   TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL- 64

Query: 152 KHDKGGNRCVQIRNWFDYRN--HICIVFEKL-GSSLYDFLRKN-NYRSFPIDLVREIARQ 207
            H       V++    +     H  ++ E     SLY  L +  N    P      + R 
Sbjct: 65  NHK----NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRD 120

Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           ++  +  + +  ++H ++KP N++ V  E                          S  K+
Sbjct: 121 VVGGMNHLRENGIVHRNIKPGNIMRVIGE-----------------------DGQSVYKL 157

Query: 268 IDFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYP--------CDIWSVGCILVELC 317
            DFG+      D+ +  +  T  Y  P++                  D+WS+G       
Sbjct: 158 TDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAA 217

Query: 318 TGEALFQTHENLEHLA-MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIK 376
           TG   F+  E       +M +++   P   +  V +        G +DW        S+ 
Sbjct: 218 TGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQK-----AENGPIDWSGDMPVSCSLS 272

Query: 377 SVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
             ++                  LT +L  +L  D        +          
Sbjct: 273 RGLQ----------------VLLTPVLANILEADQEKCWGFDQFFAETSDILH 309

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  154 bits (392), Expect = 2e-42
 Identities = 84/347 (24%), Positives = 139/347 (40%), Gaps = 83/347 (23%)

Query: 89  FALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---RGIKKYREAAMIEIE 145
                    RY I   +G+G+FG+VL+C DR  ++  A+K++       K     + E+E
Sbjct: 14  LYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVE 73

Query: 146 VLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREI 204
           +L++L  H    N  +++    +  +   IV E   G  L+D + K     F       I
Sbjct: 74  LLKKL-DHP---N-IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARI 126

Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            +Q+   I +MH   ++H DLKPEN+LL S E                        K   
Sbjct: 127 IKQVFSGITYMHKHNIVHRDLKPENILLESKE------------------------KDCD 162

Query: 265 IKVIDFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL 322
           IK+IDFG +T  + +      + T +Y APEV+ G  +   CD+WS G IL  L +G   
Sbjct: 163 IKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPP 221

Query: 323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP 382
           F      +   +++RV                      G+  +                 
Sbjct: 222 FYGKNEYD---ILKRVE--------------------TGKYAFDLPQ------------- 245

Query: 383 RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  + +   A D   L++ +L + P+ R+TA + L HP+  + 
Sbjct: 246 ------WRTISDDAKD---LIRKMLTFHPSLRITATQCLEHPWIQKY 283

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  153 bits (387), Expect = 4e-42
 Identities = 67/368 (18%), Positives = 126/368 (34%), Gaps = 88/368 (23%)

Query: 75  SPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK 134
           SP   +DD D      +   +   +     +G G  G ++          VA+K +  + 
Sbjct: 4   SPSLEQDDGDEETSVVIVGKI--SFCPKDVLGHGAEGTIV-YRGMFDNRDVAVKRI--LP 58

Query: 135 KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYR 194
           +    A  E+++L++  +H    N  ++       R    I  E   ++L +++ + ++ 
Sbjct: 59  ECFSFADREVQLLRESDEHP---N-VIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFA 114

Query: 195 SFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS 254
              ++    + +Q    +A +H L ++H DLKP N+L+                 P    
Sbjct: 115 HLGLE-PITLLQQTTSGLAHLHSLNIVHRDLKPHNILISM---------------PNAHG 158

Query: 255 YFKRMPKSSAIKVIDFGSTTYERPDQNY------IVSTRHYRAPEVILGL---GWTYPCD 305
             K         + DFG        ++       +  T  + APE++        TY  D
Sbjct: 159 KIK-------AMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVD 211

Query: 306 IWSVGCILVE-LCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD 364
           I+S GC+    +  G   F                        K + R A   +    LD
Sbjct: 212 IFSAGCVFYYVISEGSHPFG-----------------------KSLQRQANILLGACSLD 248

Query: 365 WPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 424
                                    +H D  A +   L++ ++  DP  R +A+  L+HP
Sbjct: 249 CLH--------------------PEKHEDVIARE---LIEKMIAMDPQKRPSAKHVLKHP 285

Query: 425 FFTRDHLR 432
           FF     +
Sbjct: 286 FFWSLEKQ 293

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  149 bits (377), Expect = 6e-42
 Identities = 57/342 (16%), Positives = 112/342 (32%), Gaps = 71/342 (20%)

Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQL 150
             T+ +    K+G G FG V +C  R    + AIK  +         + A+ E+     L
Sbjct: 8   RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 67

Query: 151 AKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNN--YRSFPIDLVREIARQ 207
            +H    +  V+  + +   +H+ I  E   G SL D + +N      F    ++++  Q
Sbjct: 68  GQHS---H-VVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 123

Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           +   + ++H + ++H D+KP N+ +  +        +        +            K+
Sbjct: 124 VGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN--------KVMFKI 175

Query: 268 IDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTH 326
            D G  T              + A EV+          DI+++   +V     E L +  
Sbjct: 176 GDLGHVT-RISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG 234

Query: 327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 386
           +    +       G LP+                                    +P    
Sbjct: 235 DQWHEIRQ-----GRLPR------------------------------------IP---- 249

Query: 387 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                    + + T LL+ ++  DP  R +A   ++H     
Sbjct: 250 ------QVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLS 285

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  153 bits (389), Expect = 7e-42
 Identities = 73/354 (20%), Positives = 136/354 (38%), Gaps = 94/354 (26%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR--------------GIKKYRE 138
             +   Y    K+G G +G+VL C ++      AIK+++               I+K+ E
Sbjct: 32  GKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHE 91

Query: 139 AAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFP 197
               EI +L+ L  H    N  +++ + F+ + +  +V E   G  L++ +   +   F 
Sbjct: 92  EIYNEISLLKSL-DHP---N-IIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK--FD 144

Query: 198 IDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK 257
                 I +Q+L  I ++H   ++H D+KPEN+LL +                       
Sbjct: 145 ECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKN--------------------- 183

Query: 258 RMPKSSAIKVIDFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE 315
                  IK++DFG +++   D      + T +Y APEV+    +   CD+WS G I+  
Sbjct: 184 ---SLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYI 239

Query: 316 LCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESI 375
           L  G   F    + +   ++++V                     +G+  +          
Sbjct: 240 LLCGYPPFGGQNDQD---IIKKVE--------------------KGKYYFDFND------ 270

Query: 376 KSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                         +++   A +   L++ +L YD   R TA EAL   +  + 
Sbjct: 271 -------------WKNISDEAKE---LIKLMLTYDYNKRCTAEEALNSRWIKKY 308

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  149 bits (379), Expect = 9e-42
 Identities = 73/412 (17%), Positives = 133/412 (32%), Gaps = 129/412 (31%)

Query: 73  NGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR- 131
           +         ++ ++       L  +Y +   +G+G++G V    + + + + AIKI+  
Sbjct: 2   HHHHHHSSGRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNK 61

Query: 132 -----GIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLY 185
                   K  E    E+ ++++L  H        ++   ++   +IC+V E   G  L 
Sbjct: 62  NKIRQINPKDVERIKTEVRLMKKL-HH----PNIARLYEVYEDEQYICLVMELCHGGHLL 116

Query: 186 DFLRKNNYR--------------------------------------SFPIDLVREIARQ 207
           D L                                                 L+  I RQ
Sbjct: 117 DKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQ 176

Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           +   + ++H+  + H D+KPEN L  +++                         S  IK+
Sbjct: 177 IFSALHYLHNQGICHRDIKPENFLFSTNK-------------------------SFEIKL 211

Query: 268 IDFG-STTYERPDQNY------IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCT 318
           +DFG S  + + +            T ++ APEV+     +Y   CD WS G +L  L  
Sbjct: 212 VDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLM 271

Query: 319 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSV 378
           G   F    N      + +VL                      +L +     +       
Sbjct: 272 GAVPFP-GVN--DADTISQVL--------------------NKKLCFENPNYN------- 301

Query: 379 MKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
                        +   A D   LL  LL  +  +R  A  AL+HP+ ++  
Sbjct: 302 ------------VLSPLARD---LLSNLLNRNVDERFDAMRALQHPWISQFS 338

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score =  151 bits (383), Expect = 2e-41
 Identities = 83/356 (23%), Positives = 141/356 (39%), Gaps = 70/356 (19%)

Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREA--AMIEIEVLQQL 150
            +  RY+    +G G  G V   +D      VAIK + R  +    A  A  E+ +++ +
Sbjct: 59  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 118

Query: 151 AKHDKGGNRCVQIRNWF------DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
             H    N  + + N F      +    + +V E + ++L   ++         + +  +
Sbjct: 119 -NHK---N-IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYL 169

Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L  I  +H   +IH DLKP N+++ S                              
Sbjct: 170 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD---------------------------CT 202

Query: 265 IKVIDFGSTTYERPDQN---YIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 321
           +K++DFG             Y V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + 
Sbjct: 203 LKILDFGLARTAGTSFMMTPY-VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 261

Query: 322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVR----RGRLDWPE---GAASRES 374
           LF   + ++    +   LG      +K++      YV        L +P+    +     
Sbjct: 262 LFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDS----- 316

Query: 375 IKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
                 L    +   +     A D   LL  +L  DP  R++  +AL+HP+    +
Sbjct: 317 ------LFPADSEHNKLKASQARD---LLSKMLVIDPAKRISVDDALQHPYINVWY 363

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  149 bits (378), Expect = 4e-41
 Identities = 74/342 (21%), Positives = 133/342 (38%), Gaps = 80/342 (23%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLA 151
            ++   Y I  ++G G FG V  C ++    +   K +       +     EI ++ QL 
Sbjct: 47  GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL- 105

Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
            H     + + + + F+ +  + ++ E L G  L+D +   +Y       V    RQ  E
Sbjct: 106 HHP----KLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDY-KMSEAEVINYMRQACE 160

Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            +  MH+  ++H D+KPEN++  +                          K+S++K+IDF
Sbjct: 161 GLKHMHEHSIVHLDIKPENIMCET-------------------------KKASSVKIIDF 195

Query: 271 GSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 328
           G  T   PD+      +T  + APE++      +  D+W++G +   L +G + F   ++
Sbjct: 196 GLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD 255

Query: 329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 388
           LE    ++ V                     R   ++ E A                   
Sbjct: 256 LE---TLQNVK--------------------RCDWEFDEDA------------------- 273

Query: 389 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
              V   A D    ++ LL+ +P  RLT  +AL HP+   DH
Sbjct: 274 FSSVSPEAKD---FIKNLLQKEPRKRLTVHDALEHPWLKGDH 312

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  145 bits (369), Expect = 7e-41
 Identities = 61/355 (17%), Positives = 105/355 (29%), Gaps = 99/355 (27%)

Query: 89  FALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQ 148
             + +     +K    +G G FGQV +   R   +   IK    +K   E A  E++ L 
Sbjct: 3   HTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKR---VKYNNEKAEREVKALA 59

Query: 149 QLAKH------------DKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRS 195
           +L  H                       +       + I  E     +L  ++ K     
Sbjct: 60  KL-DHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK 118

Query: 196 FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 255
               L  E+  Q+ + + ++H   +I+ DLKP N+ LV                      
Sbjct: 119 LDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLV---------------------- 156

Query: 256 FKRMPKSSAIKVIDFG-STTYERPDQNY-IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 313
                 +  +K+ DFG  T+ +   +      T  Y +PE I    +    D++++G IL
Sbjct: 157 -----DTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLIL 211

Query: 314 VELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRE 373
            EL     +  T           R  G +                             ++
Sbjct: 212 AELLH---VCDTAFETSKFFTDLR-DGIISDIF------------------------DKK 243

Query: 374 SIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                      + L+ +               LL   P DR    E LR     +
Sbjct: 244 ----------EKTLLQK---------------LLSKKPEDRPNTSEILRTLTVWK 273

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score =  148 bits (375), Expect = 7e-41
 Identities = 87/368 (23%), Positives = 149/368 (40%), Gaps = 61/368 (16%)

Query: 79  REDDKDGHYMFALGEN---LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIK 134
           R    +  Y   +G++   +  RY+    +G G  G V   +D   +  VAIK + R  +
Sbjct: 4   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 63

Query: 135 KYREA--AMIEIEVLQQLAKHDKGGNRCVQIRNWF------DYRNHICIVFEKLGSSLYD 186
               A  A  E+ +++ +  H    N  + + N F      +    + IV E + ++L  
Sbjct: 64  NQTHAKRAYRELVLMKCV-NHK---N-IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ 118

Query: 187 FLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS 246
            ++           +  +  Q+L  I  +H   +IH DLKP N+++ S   +K+ D+   
Sbjct: 119 VIQMELDHER----MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF--G 172

Query: 247 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDI 306
           L     +S+                 T Y        V TR+YRAPEVILG+G+    DI
Sbjct: 173 LARTAGTSFM---------------MTPY--------VVTRYYRAPEVILGMGYKENVDI 209

Query: 307 WSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVR----RGR 362
           WSVGCI+ E+  G  LF   ++++    +   LG      +K++      YV        
Sbjct: 210 WSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAG 269

Query: 363 LDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 422
             + +             L    +   +     A D   LL  +L  D + R++  EAL+
Sbjct: 270 YSFEK--------LFPDVLFPADSEHNKLKASQARD---LLSKMLVIDASKRISVDEALQ 318

Query: 423 HPFFTRDH 430
           HP+    +
Sbjct: 319 HPYINVWY 326

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  147 bits (372), Expect = 7e-41
 Identities = 71/344 (20%), Positives = 120/344 (34%), Gaps = 80/344 (23%)

Query: 92  GENLTSRYKIHSK-MGEGTFGQVLECWDRERKEMVAIKIV---RGIKKYREAAMIEIEVL 147
            EN  + Y + SK +G G F  V +C  +   +  A K +   R  +  R   + EI VL
Sbjct: 23  MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVL 82

Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIAR 206
           +          R + +   ++  + I ++ E   G  ++             + V  + +
Sbjct: 83  ELAKSCP----RVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIK 138

Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+LE + ++H   ++H DLKP+N+LL S                              IK
Sbjct: 139 QILEGVYYLHQNNIVHLDLKPQNILLSSIY------------------------PLGDIK 174

Query: 267 VIDFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
           ++DFG +           I+ T  Y APE++     T   D+W++G I   L T  + F 
Sbjct: 175 IVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFV 234

Query: 325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL 384
             +N E       +                     +  +D+ E                 
Sbjct: 235 GEDNQE---TYLNIS--------------------QVNVDYSEET--------------- 256

Query: 385 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                  V   A D    +Q LL  +P  R TA   L H +  +
Sbjct: 257 ----FSSVSQLATD---FIQSLLVKNPEKRPTAEICLSHSWLQQ 293

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  147 bits (373), Expect = 9e-41
 Identities = 78/364 (21%), Positives = 125/364 (34%), Gaps = 119/364 (32%)

Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR---------EAAMIEI 144
                Y++   +G+G F  V  C +RE  +  A+KI   +   +         E    E 
Sbjct: 21  LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKI---VDVAKFTSSPGLSTEDLKREA 77

Query: 145 EVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFL--RKNNYRSFPIDLV 201
            +   L KH    +  V++   +     + +VFE + G+ L   +  R +    +   + 
Sbjct: 78  SICHML-KHP---H-IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 132

Query: 202 REIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPK 261
               RQ+LE + + HD  +IH D+KP  VLL S E                         
Sbjct: 133 SHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKE------------------------N 168

Query: 262 SSAIKVIDFG-STTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL-VELC 317
           S+ +K+  FG +             V T H+ APEV+    +  P D+W  G IL + L 
Sbjct: 169 SAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS 228

Query: 318 -------TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-----W 365
                  T E LF+                                 + +G+       W
Sbjct: 229 GCLPFYGTKERLFEG--------------------------------IIKGKYKMNPRQW 256

Query: 366 PEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 425
                                    H+  SA D   L++ +L  DP +R+T  EAL HP+
Sbjct: 257 S------------------------HISESAKD---LVRRMLMLDPAERITVYEALNHPW 289

Query: 426 FTRD 429
               
Sbjct: 290 LKER 293

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score =  147 bits (373), Expect = 1e-40
 Identities = 81/366 (22%), Positives = 146/366 (39%), Gaps = 97/366 (26%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA----AMIEIEVLQQLAK 152
           S+Y+  +K+G+GTFG+V +   R+  + VA+K V  ++  +E     A+ EI++LQ L K
Sbjct: 17  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVL-MENEKEGFPITALREIKILQLL-K 74

Query: 153 HDKGGN----RCV---QIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIA 205
           H+   N      +   +   +   +  I +VF+     L   L     + F +  ++ + 
Sbjct: 75  HE---NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-FTLSEIKRVM 130

Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 265
           + LL  + ++H   ++H D+K  N +L++ + +                          +
Sbjct: 131 QMLLNGLYYIHRNKILHRDMKAAN-VLITRDGV--------------------------L 163

Query: 266 KVIDFG-----STTYERPDQNY--IVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELC 317
           K+ DFG     S         Y   V T  YR PE++LG   +  P D+W  GCI+ E+ 
Sbjct: 164 KLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW 223

Query: 318 TGEALFQTHENLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIK 376
           T   + Q +     LA++ ++ G   P+                    WP          
Sbjct: 224 TRSPIMQGNTEQHQLALISQLCGSITPE-------------------VWPN--------- 255

Query: 377 SVMKLP-------------RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 423
            V                 ++++ +  +V         L+  LL  DP  R+ + +AL H
Sbjct: 256 -VDNYELYEKLELVKGQKRKVKDRLKAYVRDPYA--LDLIDKLLVLDPAQRIDSDDALNH 312

Query: 424 PFFTRD 429
            FF  D
Sbjct: 313 DFFWSD 318

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score =  147 bits (372), Expect = 1e-40
 Identities = 85/352 (24%), Positives = 144/352 (40%), Gaps = 74/352 (21%)

Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREA--AMIEIEVLQQL 150
            L   Y   + +G G +G V    D+   E VAIK + R  +    A  A  E+ +L+ +
Sbjct: 21  ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM 80

Query: 151 AKHDKGGNRCVQIRNWF------DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
            +H+   N  + + + F             +V   + + L   +       F  + ++ +
Sbjct: 81  -QHE---N-VIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLK----FSEEKIQYL 131

Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L+ + ++H   ++H DLKP N+ +                                
Sbjct: 132 VYQMLKGLKYIHSAGVVHRDLKPGNLAVNED---------------------------CE 164

Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALF 323
           +K++DFG   +   +    V TR YRAPEVIL         DIWSVGCI+ E+ TG+ LF
Sbjct: 165 LKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLF 224

Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRV-DRHAEKYVR----RGRLDWPEGAASRESIKSV 378
           +  + L+ L  + +V G      ++++ D+ A+ Y++      R D+ +           
Sbjct: 225 KGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQ----------- 273

Query: 379 MKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
                    +       A D   LL+ +L  D   RLTA +AL HPFF    
Sbjct: 274 ---------LFPRASPQAAD---LLEKMLELDVDKRLTAAQALTHPFFEPFR 313

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score =  146 bits (371), Expect = 2e-40
 Identities = 90/351 (25%), Positives = 150/351 (42%), Gaps = 59/351 (16%)

Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI--EIEVLQQLA 151
           N++S +++ S +GEG +G V     +   E+VAIK +    K   A     EI++L+   
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF- 66

Query: 152 KHDKGGNRCVQIRNWF-----DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIAR 206
           KH+   N  + I N       +  N + I+ E + + L+  +          D ++    
Sbjct: 67  KHE---N-IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSD---DHIQYFIY 119

Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q L  +  +H   +IH DLKP N+L+ S+  +KV D+   L    D S       +    
Sbjct: 120 QTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDF--GLARIIDESAADNSEPTGQQS 177

Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQT 325
            +      +        V+TR YRAPEV+L    ++   D+WS GCIL EL     +F  
Sbjct: 178 GM----VEF--------VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG 225

Query: 326 HENLEHLAMMERVLG-PLPQHMLKRVD-RHAEKYVR----RGRLDWPEGAASRESIKSVM 379
            +    L ++  ++G P   + L+ ++   A +Y++           +            
Sbjct: 226 RDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEK------------ 273

Query: 380 KLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
             P         V+    DL   LQ +L +DP  R+TA+EAL HP+    H
Sbjct: 274 MFP--------RVNPKGIDL---LQRMLVFDPAKRITAKEALEHPYLQTYH 313

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  145 bits (369), Expect = 2e-40
 Identities = 73/347 (21%), Positives = 125/347 (36%), Gaps = 85/347 (24%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY-------REAAMIEIE 145
           + +   Y I  ++G G F  V +C ++      A K ++  +         RE    E+ 
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67

Query: 146 VLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREI 204
           +L+Q+  H       + + + ++ R  + ++ E + G  L+DFL +        +     
Sbjct: 68  ILRQV-LHH----NVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSF 120

Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            +Q+L+ + ++H   + H DLKPEN++L+                               
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKN-----------------------IPIPH 157

Query: 265 IKVIDFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL 322
           IK+IDFG          +  I  T  + APE++         D+WS+G I   L +G + 
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217

Query: 323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP 382
           F               LG   Q  L          +     D+ E               
Sbjct: 218 F---------------LGDTKQETLAN--------ITSVSYDFDEEF------------- 241

Query: 383 RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                   H    A D    ++ LL  +   RLT +EALRHP+ T  
Sbjct: 242 ------FSHTSELAKD---FIRKLLVKETRKRLTIQEALRHPWITPV 279

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score =  146 bits (371), Expect = 2e-40
 Identities = 80/373 (21%), Positives = 136/373 (36%), Gaps = 78/373 (20%)

Query: 83  KDGHYMFALGEN---LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREA 139
           K    M  L      + S Y +   +  G++G V    D E    VAIK V         
Sbjct: 5   KGEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRT 63

Query: 140 AMI------------EIEVLQQLAKHDKGGNRCVQIRNWF-----DYRNHICIVFEKLGS 182
             I            EI +L     H    N  + +R+ F        + + +V E + +
Sbjct: 64  VNILSDSFLCKRVLREIRLLNHF-HHP---N-ILGLRDIFVHFEEPAMHKLYLVTELMRT 118

Query: 183 SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPD 242
            L   +            ++     +L  +  +H+  ++H DL P N +L++        
Sbjct: 119 DLAQVIHDQR-IVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGN-ILLADN------ 170

Query: 243 YKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQN---YIVSTRHYRAPEVILGL- 298
                               + I + DF     +  D N   Y V+ R YRAPE+++   
Sbjct: 171 --------------------NDITICDFNLAREDTADANKTHY-VTHRWYRAPELVMQFK 209

Query: 299 GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVD-RHAEKY 357
           G+T   D+WS GC++ E+   +ALF+       L  +  V+G      +       A  Y
Sbjct: 210 GFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDY 269

Query: 358 VRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA 417
           +R    + P       +  +V  +P          D  A D   L+  +L ++P  R++ 
Sbjct: 270 LRNSLSNVP-----ARAWTAV--VP--------TADPVALD---LIAKMLEFNPQRRIST 311

Query: 418 REALRHPFFTRDH 430
            +ALRHP+F    
Sbjct: 312 EQALRHPYFESLF 324

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score =  146 bits (371), Expect = 2e-40
 Identities = 83/357 (23%), Positives = 152/357 (42%), Gaps = 83/357 (23%)

Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--------KKYREAAMIEIE 145
            +  RY+  S +G G +G V   +D +    VA+K +           + YRE     + 
Sbjct: 26  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LR 80

Query: 146 VLQQLAKHDKGGNRCVQIRNWF------DYRNHICIVFEKLGSSLYDFLRKNNYRSFPID 199
           +L+ + KH+   N  + + + F      +  N + +V   +G+ L + ++         D
Sbjct: 81  LLKHM-KHE---N-VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---D 132

Query: 200 LVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM 259
            V+ +  Q+L  + ++H   +IH DLKP N+ +                           
Sbjct: 133 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED------------------------ 168

Query: 260 PKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCT 318
                +K++DFG   +   +    V+TR YRAPE++L    +    DIWSVGCI+ EL T
Sbjct: 169 ---CELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225

Query: 319 GEALFQTHENLEHLAMMERVLGPLPQHMLKRV-DRHAEKYVR----RGRLDWPEGAASRE 373
           G  LF   ++++ L ++ R++G     +LK++    A  Y++      ++++        
Sbjct: 226 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFAN------ 279

Query: 374 SIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
                         +    +  A D   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 280 --------------VFIGANPLAVD---LLEKMLVLDSDKRITAAQALAHAYFAQYH 319

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score =  147 bits (373), Expect = 2e-40
 Identities = 78/391 (19%), Positives = 146/391 (37%), Gaps = 95/391 (24%)

Query: 52  PPRAPSDHVTSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKM-GEGTF 110
           PP+ P+  +               P +         +      +   YK+ S++ G G  
Sbjct: 20  PPQPPTPALPHPPAQPPPPPPQQFPQFHVKSG----LQIKKNAIIDDYKVTSQVLGLGIN 75

Query: 111 GQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD-- 168
           G+VL+ +++  +E  A+K+++   K R     E+E+  + ++     +  V+I + ++  
Sbjct: 76  GKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCP---H-IVRIVDVYENL 127

Query: 169 --YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDL 225
              R  + IV E L G  L+  ++    ++F      EI + + E I ++H + + H D+
Sbjct: 128 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 187

Query: 226 KPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNY--I 283
           KPEN+L  S                           ++ +K+ DFG         +    
Sbjct: 188 KPENLLYTSKR------------------------PNAILKLTDFGFAKETTSHNSLTTP 223

Query: 284 VSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLP 343
             T +Y APEV+    +   CD+WS+G I+  L  G   F ++  L            + 
Sbjct: 224 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-----------AIS 272

Query: 344 QHMLKRVDRHAEKYVRRGRLD-----WPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 398
             M  R        +R G+ +     W                          V      
Sbjct: 273 PGMKTR--------IRMGQYEFPNPEWS------------------------EVSEEVKM 300

Query: 399 LTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
              L++ LL+ +PT R+T  E + HP+  + 
Sbjct: 301 ---LIRNLLKTEPTQRMTITEFMNHPWIMQS 328

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  145 bits (367), Expect = 3e-40
 Identities = 70/359 (19%), Positives = 124/359 (34%), Gaps = 88/359 (24%)

Query: 94  NLTSRYKIHSKM-GEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLA 151
                Y++   + GEG   +V  C +    +  A+KI+       R     E+E+L Q  
Sbjct: 9   RFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQ 68

Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
            H    N  +++  +F+  +   +VFEK+ G S+   + K   R F       + + +  
Sbjct: 69  GHR---N-VLELIEFFEEEDRFYLVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVAS 122

Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + F+H+  + H DLKPEN+L                             + S +K+ DF
Sbjct: 123 ALDFLHNKGIAHRDLKPENILCEHPN------------------------QVSPVKICDF 158

Query: 271 GSTTYERPDQNY----------IVSTRHYRAPEVILGLGWTY-----PCDIWSVGCILVE 315
              +  + + +              +  Y APEV+             CD+WS+G IL  
Sbjct: 159 DLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYI 218

Query: 316 LCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-----WPEGAA 370
           L +G   F      +               + +         ++ G+ +     W     
Sbjct: 219 LLSGYPPFVGRCGSDCGWDRGEACPACQNMLFES--------IQEGKYEFPDKDWA---- 266

Query: 371 SRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                               H+  +A D   L+  LL  D   RL+A + L+HP+    
Sbjct: 267 --------------------HISCAAKD---LISKLLVRDAKQRLSAAQVLQHPWVQGC 302

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  144 bits (365), Expect = 3e-40
 Identities = 67/346 (19%), Positives = 126/346 (36%), Gaps = 85/346 (24%)

Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY-------REAAMIEIEV 146
            +   Y++  ++G G F  V +C  +   +  A K ++  +         RE    E+ +
Sbjct: 2   MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61

Query: 147 LQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIA 205
           L+++ +H       + + + F+ +  + ++ E + G  L+DFL +        D   +  
Sbjct: 62  LREI-RHP----NIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFL 114

Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 265
           +Q+L+ + ++H   + H DLKPEN++L+                        +   +  I
Sbjct: 115 KQILDGVHYLHSKRIAHFDLKPENIMLLD-----------------------KNVPNPRI 151

Query: 266 KVIDFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 323
           K+IDFG          +  I  T  + APE++         D+WS+G I   L +G + F
Sbjct: 152 KLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211

Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR 383
                          LG   Q  L          +     D+ E                
Sbjct: 212 ---------------LGETKQETLTN--------ISAVNYDFDEEY-------------- 234

Query: 384 LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  +    A D    ++ LL  DP  R+T  ++L H +    
Sbjct: 235 -----FSNTSELAKD---FIRRLLVKDPKRRMTIAQSLEHSWIKAI 272

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  143 bits (363), Expect = 5e-40
 Identities = 79/352 (22%), Positives = 125/352 (35%), Gaps = 89/352 (25%)

Query: 85  GHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-- 142
           G         +   +    K+G G FG V    +R       IK    I K R    +  
Sbjct: 10  GRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKT---INKDRSQVPMEQ 66

Query: 143 ---EIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFL--RKNNYRSF 196
              EIEVL+ L  H       ++I   F+  +++ IV E   G  L + +   +   ++ 
Sbjct: 67  IEAEIEVLKSL-DHP----NIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKAL 121

Query: 197 PIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF 256
               V E+ +Q++  +A+ H   ++H DLKPEN+L   +                     
Sbjct: 122 SEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTS-------------------- 161

Query: 257 KRMPKSSAIKVIDFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILV 314
                 S IK+IDFG     + D++      T  Y APEV      T+ CDIWS G ++ 
Sbjct: 162 ----PHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMY 216

Query: 315 ELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRES 374
            L TG   F    +LE +                       +       ++         
Sbjct: 217 FLLTGCLPFT-GTSLEEVQ----------------------QKATYKEPNYAVEC----- 248

Query: 375 IKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
                          + +   A D   LL+ +L  DP  R +A + L H +F
Sbjct: 249 ---------------RPLTPQAVD---LLKQMLTKDPERRPSAAQVLHHEWF 282

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  144 bits (365), Expect = 9e-40
 Identities = 66/347 (19%), Positives = 124/347 (35%), Gaps = 85/347 (24%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY-------REAAMIEIE 145
           EN+   Y    ++G G F  V +C ++      A K ++  +         RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66

Query: 146 VLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREI 204
           +L+++ +H       + +   ++ +  + ++ E + G  L+DFL +        +   E 
Sbjct: 67  ILKEI-QHP----NVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEF 119

Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            +Q+L  + ++H L + H DLKPEN++L+                               
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRN-----------------------VPKPR 156

Query: 265 IKVIDFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL 322
           IK+IDFG          +  I  T  + APE++         D+WS+G I   L +G + 
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216

Query: 323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP 382
           F      E    +  V                         ++ +               
Sbjct: 217 FLGDTKQE---TLANVS--------------------AVNYEFEDEY------------- 240

Query: 383 RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                   +    A D    ++ LL  DP  R+T +++L+HP+    
Sbjct: 241 ------FSNTSALAKD---FIRRLLVKDPKKRMTIQDSLQHPWIKPK 278

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score =  145 bits (367), Expect = 1e-39
 Identities = 85/356 (23%), Positives = 146/356 (41%), Gaps = 77/356 (21%)

Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI--EIEVLQQLA 151
           ++  RY   S +GEG +G V   +D   K  VAIK +   +          EI++L +  
Sbjct: 24  DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF- 82

Query: 152 KHDKGGNRCVQIRNWF-----DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIAR 206
           +H+   N  + I +       +    + IV + + + LY  L+  +      D +     
Sbjct: 83  RHE---N-IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLY 135

Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L  + ++H   ++H DLKP N LL+++                             +K
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSN-LLLNTT--------------------------CDLK 168

Query: 267 VIDFG---STTYERPDQNYI---VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTG 319
           + DFG       +     ++   V+TR YRAPE++L   G+T   DIWSVGCIL E+ + 
Sbjct: 169 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228

Query: 320 EALFQTHENLEHLAMMERVLGPLPQHMLKRV-DRHAEKYVR----RGRLDWPEGAASRES 374
             +F     L+ L  +  +LG   Q  L  + +  A  Y+     + ++ W         
Sbjct: 229 RPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNR------- 281

Query: 375 IKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
                  P        + D  A D   LL  +L ++P  R+   +AL HP+  + +
Sbjct: 282 -----LFP--------NADSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQYY 321

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  144 bits (366), Expect = 1e-39
 Identities = 72/348 (20%), Positives = 124/348 (35%), Gaps = 85/348 (24%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-------KYREAAMIEIE 145
           + +   Y I  ++G G F  V +C ++      A K ++  +         RE    E+ 
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67

Query: 146 VLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREI 204
           +L+Q+  H       + + + ++ R  + ++ E + G  L+DFL +        +     
Sbjct: 68  ILRQV-LHP----NIITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSF 120

Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            +Q+L+ + ++H   + H DLKPEN++L+                               
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKN-----------------------IPIPH 157

Query: 265 IKVIDFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL 322
           IK+IDFG          +  I  T  + APE++         D+WS+G I   L +G + 
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217

Query: 323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP 382
           F               LG   Q  L          +     D+ E               
Sbjct: 218 F---------------LGDTKQETLAN--------ITAVSYDFDEEF------------- 241

Query: 383 RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
                        A D    ++ LL  +   RLT +EALRHP+ T   
Sbjct: 242 ------FSQTSELAKD---FIRKLLVKETRKRLTIQEALRHPWITPVD 280

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  142 bits (361), Expect = 1e-39
 Identities = 87/358 (24%), Positives = 138/358 (38%), Gaps = 93/358 (25%)

Query: 83  KDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---RGIKKYREA 139
             G            RY I   +G+G+FG+VL+C DR  ++  A+K++       K    
Sbjct: 8   SSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTST 67

Query: 140 AMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPI 198
            + E+E+L++L  H    N  +++    +  +   IV E   G  L+D + K     F  
Sbjct: 68  ILREVELLKKL-DHP---N-IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSE 120

Query: 199 DLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKR 258
                I +Q+   I +MH   ++H DLKPEN+LL S E                      
Sbjct: 121 HDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKE---------------------- 158

Query: 259 MPKSSAIKVIDFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL 316
             K   IK+IDFG +T  + +      + T +Y APEV+ G  +   CD+WS G IL  L
Sbjct: 159 --KDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYIL 215

Query: 317 CTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-----WPEGAAS 371
            +G   F   +N   +                       K V  G+       W      
Sbjct: 216 LSGTPPF-YGKNEYDIL----------------------KRVETGKYAFDLPQWR----- 247

Query: 372 RESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                               +   A D   L++ +L + P+ R+TA + L HP+  + 
Sbjct: 248 -------------------TISDDAKD---LIRKMLTFHPSLRITATQCLEHPWIQKY 283

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score =  143 bits (362), Expect = 1e-39
 Identities = 73/346 (21%), Positives = 133/346 (38%), Gaps = 91/346 (26%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-EIEVLQQLA 151
            N+   +     +G G F +V     R   ++ A+K ++    +R++++  EI VL+++ 
Sbjct: 5   TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKI- 63

Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
           KH+   N  V + + ++   H  +V + + G  L+D + +     +       + +Q+L 
Sbjct: 64  KHE---N-IVTLEDIYESTTHYYLVMQLVSGGELFDRILERGV--YTEKDASLVIQQVLS 117

Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++H+  ++H DLKPEN+L ++ E                        ++S I + DF
Sbjct: 118 AVKYLHENGIVHRDLKPENLLYLTPE------------------------ENSKIMITDF 153

Query: 271 GSTTYERPDQNY-IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL-VELCTGEALFQTHEN 328
           G +  E+         T  Y APEV+    ++   D WS+G I  + LC G   F   E 
Sbjct: 154 GLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLC-GYPPFYE-ET 211

Query: 329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-----WPEGAASRESIKSVMKLPR 383
              L   E++                      G  +     W                  
Sbjct: 212 ESKL--FEKIK--------------------EGYYEFESPFWD----------------- 232

Query: 384 LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                   +  SA D    +  LL  DP +R T  +AL HP+   +
Sbjct: 233 -------DISESAKD---FICHLLEKDPNERYTCEKALSHPWIDGN 268

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  148 bits (375), Expect = 2e-39
 Identities = 75/342 (21%), Positives = 128/342 (37%), Gaps = 80/342 (23%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY-REAAMIEIEVLQQLA 151
           +++   Y IH ++G G FG V    +R      A K V    +  +E    EI+ +  L 
Sbjct: 153 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL- 211

Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
           +H       V + + F+  N + +++E + G  L++ +   +      D   E  RQ+ +
Sbjct: 212 RHPT----LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN-KMSEDEAVEYMRQVCK 266

Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            +  MH+   +H DLKPEN++  +                          +S+ +K+IDF
Sbjct: 267 GLCHMHENNYVHLDLKPENIMFTT-------------------------KRSNELKLIDF 301

Query: 271 GSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 328
           G T +  P Q+      T  + APEV  G    Y  D+WSVG +   L +G + F    +
Sbjct: 302 GLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND 361

Query: 329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 388
            E    +  V                         +  + A                   
Sbjct: 362 DE---TLRNVK--------------------SCDWNMDDSA------------------- 379

Query: 389 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
              +     D    ++ LL  DP  R+T  +AL HP+ T  +
Sbjct: 380 FSGISEDGKD---FIRKLLLADPNTRMTIHQALEHPWLTPGN 418

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score =  144 bits (364), Expect = 2e-39
 Identities = 77/345 (22%), Positives = 134/345 (38%), Gaps = 82/345 (23%)

Query: 93  ENLTSRYKIHSKM-GEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLA 151
             +T  Y++  ++ G G  G+VLEC+ R   +  A+K++    K R+    E++   Q +
Sbjct: 24  YAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ----EVDHHWQAS 79

Query: 152 KHDKGGNRCVQIRNWFD----YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIAR 206
                 +  V I + ++     +  + I+ E + G  L+  +++   ++F      EI R
Sbjct: 80  GGP---H-IVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMR 135

Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
            +   I F+H   + H D+KPEN+L  S E                        K + +K
Sbjct: 136 DIGTAIQFLHSHNIAHRDVKPENLLYTSKE------------------------KDAVLK 171

Query: 267 VIDFG-STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 325
           + DFG +    +        T +Y APEV+    +   CD+WS+G I+  L  G   F +
Sbjct: 172 LTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYS 231

Query: 326 -HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL 384
                    M  R                    +R G+  +P    S             
Sbjct: 232 NTGQAISPGMKRR--------------------IRLGQYGFPNPEWS------------- 258

Query: 385 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                  V   A     L++ LL+ DPT+RLT  + + HP+  + 
Sbjct: 259 ------EVSEDAKQ---LIRLLLKTDPTERLTITQFMNHPWINQS 294

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  141 bits (359), Expect = 2e-39
 Identities = 71/349 (20%), Positives = 121/349 (34%), Gaps = 97/349 (27%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR----EAAMIEIEVLQ 148
            ++   Y + + +G G++G+V     +  +   A K    I KY     +    EIE+++
Sbjct: 5   GDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKK---IPKYFVEDVDRFKQEIEIMK 61

Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 207
            L  H       +++   F+    I +V E   G  L++ +       F       I + 
Sbjct: 62  SL-DH----PNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRV--FRESDAARIMKD 114

Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           +L  +A+ H L + H DLKPEN L ++                            S +K+
Sbjct: 115 VLSAVAYCHKLNVAHRDLKPENFLFLTDS------------------------PDSPLKL 150

Query: 268 IDFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT 325
           IDFG     +P +     V T +Y +P+V+ G  +   CD WS G ++  L  G   F  
Sbjct: 151 IDFGLAARFKPGKMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSA 209

Query: 326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-----WPEGAASRESIKSVMK 380
                 +                         +R G        W               
Sbjct: 210 -PTDSEVM----------------------LKIREGTFTFPEKDWL-------------- 232

Query: 381 LPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                     +V   A     L++ LL   P  R+T+ +AL H +F + 
Sbjct: 233 ----------NVSPQAES---LIRRLLTKSPKQRITSLQALEHEWFEKQ 268

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score =  146 bits (369), Expect = 2e-39
 Identities = 93/433 (21%), Positives = 160/433 (36%), Gaps = 89/433 (20%)

Query: 53  PRAPSDHVTSSSLFVKGVARNGSPPWREDDKDGHYMFALGE---NLTSRYKIHSKMGEGT 109
             A   H + +   V G  + G    +                  +  RY+I   +G G+
Sbjct: 6   AAAAQQHNSGTQHTVSGSQQEGQQRKQHHSSKPTASMPRPHSDWQIPDRYEIRHLIGTGS 65

Query: 110 FGQVLECWDRERKEMVAIKIVRGI--------KKYREAAMIEIEVLQQLAKHDKGGN--- 158
           +G V E +D+  K +VAIK +  +        +  RE     I +L +L  HD   +   
Sbjct: 66  YGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILRE-----IAILNRL-NHD---HVVK 116

Query: 159 -RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
              + I    +  + + +V E   S      R   Y +     ++ +   LL  + ++H 
Sbjct: 117 VLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLT--ELHIKTLLYNLLVGVKYVHS 174

Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
             ++H DLKP N L+     +KV D+  +       +   ++P S     ++  +  + +
Sbjct: 175 AGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTK 234

Query: 278 PDQNYI---VSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCT-----------GEAL 322
             +  +   V TR YRAPE+IL    +T   D+WS+GCI  EL                L
Sbjct: 235 NLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPL 294

Query: 323 F--------------------QTHENLEHLAMMERVLGPLPQHMLKRV-DRHAEKYVR-- 359
           F                     T  N + L ++  +LG   +  ++ +    A++Y+R  
Sbjct: 295 FPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIF 354

Query: 360 --RGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTA 417
             R   D  E            + P             A  L   L+ +L ++P  R+T 
Sbjct: 355 PKREGTDLAE------------RFP--------ASSADAIHL---LKRMLVFNPNKRITI 391

Query: 418 REALRHPFFTRDH 430
            E L HPFF    
Sbjct: 392 NECLAHPFFKEVR 404

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  143 bits (363), Expect = 2e-39
 Identities = 47/249 (18%), Positives = 94/249 (37%), Gaps = 28/249 (11%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAK 152
           +  +    +H  +GEG F QV E    +  +    +    +K  + A   E  +  QL +
Sbjct: 61  QLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKF-VLKVQKPANPWEFYIGTQLME 119

Query: 153 HDKGGNR--CVQIRNWFDYRNHICIVFEKL-GSSLYDFL---RKNNYRSFPIDLVREIAR 206
             K   +   ++  +   ++N   +V E     +L + +   +    +  P  LV   A 
Sbjct: 120 RLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAM 179

Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           ++L  I  +HD  +IH D+KP+N +L +    +  +   S                  + 
Sbjct: 180 RMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAG----------------LA 223

Query: 267 VIDFGSTTYER--PDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 321
           +ID G +   +  P      +   T  ++  E++    W Y  D + V   +  +  G  
Sbjct: 224 LIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTY 283

Query: 322 LFQTHENLE 330
           +   +E  E
Sbjct: 284 MKVKNEGGE 292

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  143 bits (362), Expect = 3e-39
 Identities = 67/340 (19%), Positives = 117/340 (34%), Gaps = 91/340 (26%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHD 154
           +Y    K+GEG+FG+ +     E      IK +       K RE +  E+ VL  + KH 
Sbjct: 25  KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM-KHP 83

Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                 VQ R  F+    + IV +   G  L+  +       F  D + +   Q+   + 
Sbjct: 84  ----NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK 139

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
            +HD  ++H D+K +N+ L                            K   +++ DFG  
Sbjct: 140 HVHDRKILHRDIKSQNIFL---------------------------TKDGTVQLGDFGIA 172

Query: 274 TYERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                        + T +Y +PE+     +    DIW++GC+L ELCT +  F+   +++
Sbjct: 173 RVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA-GSMK 231

Query: 331 HLAM--MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 388
           +L +  +     P+  H                         S +               
Sbjct: 232 NLVLKIISGSFPPVSLHY------------------------SYD--------------- 252

Query: 389 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                     L  L+  L + +P DR +    L   F  +
Sbjct: 253 ----------LRSLVSQLFKRNPRDRPSVNSILEKGFIAK 282

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  144 bits (365), Expect = 4e-39
 Identities = 84/356 (23%), Positives = 137/356 (38%), Gaps = 91/356 (25%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV-------RGIKKYREAAMI--E 143
           + L   Y +   +G G  G+V   ++R+  + VAI+I+          ++   A  +  E
Sbjct: 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 190

Query: 144 IEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVR 202
           IE+L++L  H       ++I+N+FD      IV E + G  L+D +  N          +
Sbjct: 191 IEILKKL-NHP----CIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKR--LKEATCK 242

Query: 203 EIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKS 262
               Q+L  + ++H+  +IH DLKPENVLL S E                        + 
Sbjct: 243 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE------------------------ED 278

Query: 263 SAIKVIDFGSTTYERPDQNY--IVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELC 317
             IK+ DFG +           +  T  Y APEV++ +   G+    D WS+G IL    
Sbjct: 279 CLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 338

Query: 318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS 377
           +G   F  H                   +  +        +  G+ ++            
Sbjct: 339 SGYPPFSEHRT--------------QVSLKDQ--------ITSGKYNFIP---------- 366

Query: 378 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 433
                     +   V   A D   L++ LL  DP  R T  EALRHP+   + ++R
Sbjct: 367 ---------EVWAEVSEKALD---LVKKLLVVDPKARFTTEEALRHPWLQDEDMKR 410

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  142 bits (359), Expect = 8e-39
 Identities = 77/346 (22%), Positives = 134/346 (38%), Gaps = 95/346 (27%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI--EIEVLQQL 150
           + L+  +++ S++G G    V  C  +  ++  A+K+   +KK  +  ++  EI VL +L
Sbjct: 49  DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKV---LKKTVDKKIVRTEIGVLLRL 105

Query: 151 AKHDKGGNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLL 209
             H    N  ++++  F+    I +V E   G  L+D + +  Y  +      +  +Q+L
Sbjct: 106 -SHP---N-IIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY--YSERDAADAVKQIL 158

Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
           E +A++H+  ++H DLKPEN+L  +                            + +K+ D
Sbjct: 159 EAVAYLHENGIVHRDLKPENLLYATPA------------------------PDAPLKIAD 194

Query: 270 FGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL-VELCTGEALFQTH 326
           FG +           +  T  Y APE++ G  +    D+WSVG I  + LC G   F   
Sbjct: 195 FGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLC-GFEPFYDE 253

Query: 327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-----WPEGAASRESIKSVMKL 381
              +   M  R+L                              W                
Sbjct: 254 RGDQ--FMFRRIL--------------------NCEYYFISPWWD--------------- 276

Query: 382 PRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
                     V  +A D   L++ L+  DP  RLT  +AL+HP+ T
Sbjct: 277 ---------EVSLNAKD---LVRKLIVLDPKKRLTTFQALQHPWVT 310

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  142 bits (360), Expect = 8e-39
 Identities = 68/371 (18%), Positives = 126/371 (33%), Gaps = 110/371 (29%)

Query: 79  REDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---RGIKK 135
           ++  +   +M       +  Y +  ++G+G F  V  C  +      A KI+   +   +
Sbjct: 11  QQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR 70

Query: 136 YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYR 194
             +    E  + ++L +H    N  V++ +     +   +VF+ + G  L++ +    + 
Sbjct: 71  DFQKLEREARICRKL-QHP---N-IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF- 124

Query: 195 SFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS 254
            +         +Q+LE IA+ H   ++H +LKPEN+LL S                    
Sbjct: 125 -YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA------------------ 165

Query: 255 YFKRMPKSSAIKVIDFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCI 312
                 K +A+K+ DFG        + +     T  Y +PEV+    ++ P DIW+ G I
Sbjct: 166 ------KGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVI 219

Query: 313 L-VELC--------TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL 363
           L + L             L+                                  ++ G  
Sbjct: 220 LYILLVGYPPFWDEDQHRLYAQ--------------------------------IKAGAY 247

Query: 364 D-----WPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAR 418
           D     W                          V   A     L+  +L  +P  R+TA 
Sbjct: 248 DYPSPEWD------------------------TVTPEAKS---LIDSMLTVNPKKRITAD 280

Query: 419 EALRHPFFTRD 429
           +AL+ P+    
Sbjct: 281 QALKVPWICNR 291

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  143 bits (361), Expect = 9e-39
 Identities = 58/343 (16%), Positives = 112/343 (32%), Gaps = 66/343 (19%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEVLQQLAKHDK 155
            + +   +G+G    V     ++  ++ AIK+       +  +  M E EVL++L  H  
Sbjct: 10  LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHK- 67

Query: 156 GGNRCVQIRNWFDYRN--HICIVFEKL-GSSLYDFLRKN-NYRSFPIDLVREIARQLLEC 211
                V++    +     H  ++ E     SLY  L +  N    P      + R ++  
Sbjct: 68  ---NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG 124

Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           +  + +  ++H ++KP N++ V  E                          S  K+ DFG
Sbjct: 125 MNHLRENGIVHRNIKPGNIMRVIGE-----------------------DGQSVYKLTDFG 161

Query: 272 STTYERPDQNY--IVSTRHYRAPEVILGLGWTYP--------CDIWSVGCILVELCTGEA 321
           +      D+ +  +  T  Y  P++                  D+WS+G       TG  
Sbjct: 162 AARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSL 221

Query: 322 LFQTHENLEHLA-MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK 380
            F+  E       +M +++   P   +  V +        G +DW        S+   ++
Sbjct: 222 PFRPFEGPRRNKEVMYKIITGKPSGAISGVQK-----AENGPIDWSGDMPVSCSLSRGLQ 276

Query: 381 LPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 423
                             LT +L  +L  D        +    
Sbjct: 277 ----------------VLLTPVLANILEADQEKCWGFDQFFAE 303

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score =  142 bits (359), Expect = 1e-38
 Identities = 87/352 (24%), Positives = 148/352 (42%), Gaps = 73/352 (20%)

Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREA--AMIEIEVLQQL 150
            + + Y+    +G G +G V    D      VAIK + R  +    A  A  E+ +L+ +
Sbjct: 22  EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM 81

Query: 151 AKHDKGGNRCVQIRNWF------DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREI 204
            +H+   N  + + + F      D      +V   +G+ L   ++         D ++ +
Sbjct: 82  -RHE---N-VIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGE---DRIQFL 133

Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             Q+L+ + ++H   +IH DLKP N+ +                                
Sbjct: 134 VYQMLKGLRYIHAAGIIHRDLKPGNLAVNED---------------------------CE 166

Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALF 323
           +K++DFG       +    V TR YRAPEVIL    +T   DIWSVGCI+ E+ TG+ LF
Sbjct: 167 LKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLF 226

Query: 324 QTHENLEHLAMMERVLGPLPQHMLKRV-DRHAEKYVR----RGRLDWPEGAASRESIKSV 378
           +  ++L+ L  + +V G  P   ++R+    A+ Y++      + D+             
Sbjct: 227 KGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFAS----------- 275

Query: 379 MKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
                    I+ +    A +   LL+ +L  D   R+TA EAL HP+F   H
Sbjct: 276 ---------ILTNASPLAVN---LLEKMLVLDAEQRVTAGEALAHPYFESLH 315

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  143 bits (362), Expect = 2e-38
 Identities = 72/359 (20%), Positives = 125/359 (34%), Gaps = 111/359 (30%)

Query: 92  GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---RGIKKYREAAMIEIEVLQ 148
               T  Y++  ++G+G F  V  C      +  A  I+   +   +  +    E  + +
Sbjct: 6   CTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICR 65

Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 207
            L KH    N  V++ +      H  ++F+ + G  L++ +    Y  +         +Q
Sbjct: 66  LL-KHP---N-IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY--YSEADASHCIQQ 118

Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           +LE +   H + ++H +LKPEN+LL S                          K +A+K+
Sbjct: 119 ILEAVLHCHQMGVVHRNLKPENLLLASKL------------------------KGAAVKL 154

Query: 268 IDFG-STTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL-VELC------ 317
            DFG +   E   Q +     T  Y +PEV+    +  P D+W+ G IL + L       
Sbjct: 155 ADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFW 214

Query: 318 --TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-----WPEGAA 370
                 L+Q                                 ++ G  D     W     
Sbjct: 215 DEDQHRLYQ--------------------------------QIKAGAYDFPSPEWD---- 238

Query: 371 SRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                                V   A D   L+  +L  +P+ R+TA EAL+HP+ +  
Sbjct: 239 --------------------TVTPEAKD---LINKMLTINPSKRITAAEALKHPWISHR 274

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  139 bits (352), Expect = 3e-38
 Identities = 67/357 (18%), Positives = 121/357 (33%), Gaps = 110/357 (30%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---RGIKKYREAAMIEIEVLQQ 149
              +  Y +  ++G+G F  V  C  +      A KI+   +   +  +    E  + ++
Sbjct: 2   TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 61

Query: 150 LAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL 208
           L +H    N  V++ +     +   +VF+ + G  L++ +    +  +         +Q+
Sbjct: 62  L-QHP---N-IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQI 114

Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
           LE IA+ H   ++H +LKPEN+LL S                          K +A+K+ 
Sbjct: 115 LESIAYCHSNGIVHRNLKPENLLLASKA------------------------KGAAVKLA 150

Query: 269 DFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCIL-VELC-------- 317
           DFG        + +     T  Y +PEV+    ++ P DIW+ G IL + L         
Sbjct: 151 DFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 210

Query: 318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-----WPEGAASR 372
               L+                                  ++ G  D     W       
Sbjct: 211 DQHRLYAQ--------------------------------IKAGAYDYPSPEWD------ 232

Query: 373 ESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                              V   A     L+  +L  +P  R+TA +AL+ P+    
Sbjct: 233 ------------------TVTPEAKS---LIDSMLTVNPKKRITADQALKVPWICNR 268

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score =  141 bits (356), Expect = 6e-38
 Identities = 84/368 (22%), Positives = 143/368 (38%), Gaps = 89/368 (24%)

Query: 100 KIHSKMGEGTFGQVLECWDRERK--EMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDK 155
               K+G GT+G V +   ++ K  +  A+K +   GI     +A  EI +L++L KH  
Sbjct: 24  YEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS---MSACREIALLREL-KHP- 78

Query: 156 GGNRCVQIRNWFDYRNHICI--VFE-------KLGSSLYDFLRKNNYRSFPIDLVREIAR 206
             N  + ++  F       +  +F+        +                P  +V+ +  
Sbjct: 79  --N-VISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLY 135

Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+L+ I ++H   ++H DLKP N +LV  E                       P+   +K
Sbjct: 136 QILDGIHYLHANWVLHRDLKPAN-ILVMGEG----------------------PERGRVK 172

Query: 267 VIDFG-STTYERPDQNY-----IVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCT 318
           + D G +  +  P +       +V T  YRAPE++LG    Y    DIW++GCI  EL T
Sbjct: 173 IADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLG-ARHYTKAIDIWAIGCIFAELLT 231

Query: 319 GEALFQ---------THENLEHLAMMERVLG-PLPQHMLKRVDRHAEKYVRRGRLDWPE- 367
            E +F             + + L  +  V+G P  +                   DW + 
Sbjct: 232 SEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADK-------------------DWEDI 272

Query: 368 ------GAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 421
                     ++  ++      L   + +H         HLLQ LL  DP  R+T+ +A+
Sbjct: 273 KKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAM 332

Query: 422 RHPFFTRD 429
           + P+F  D
Sbjct: 333 QDPYFLED 340

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  137 bits (348), Expect = 2e-37
 Identities = 88/367 (23%), Positives = 140/367 (38%), Gaps = 103/367 (28%)

Query: 88  MFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV-------RGIKKYREAA 140
           M    + L   Y +   +G G  G+V   ++R+  + VAIKI+          ++   A 
Sbjct: 1   MSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL 60

Query: 141 MI--EIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFP 197
            +  EIE+L++L  H       ++I+N+FD  ++  IV E + G  L+D +  N      
Sbjct: 61  NVETEIEILKKL-NHP----CIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKR--LK 112

Query: 198 IDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK 257
               +    Q+L  + ++H+  +IH DLKPENVLL S E                     
Sbjct: 113 EATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE--------------------- 151

Query: 258 RMPKSSAIKVIDFGSTTYERPDQNY--IVSTRHYRAPEVILGL---GWTYPCDIWSVGCI 312
              +   IK+ DFG +           +  T  Y APEV++ +   G+    D WS+G I
Sbjct: 152 ---EDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 208

Query: 313 L-VELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-----WP 366
           L + L  G   F  H                   +  +        +  G+ +     W 
Sbjct: 209 LFICLS-GYPPFSEHRT--------------QVSLKDQ--------ITSGKYNFIPEVWA 245

Query: 367 EGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
                                    V   A D   L++ LL  DP  R T  EALRHP+ 
Sbjct: 246 ------------------------EVSEKALD---LVKKLLVVDPKARFTTEEALRHPWL 278

Query: 427 TRDHLRR 433
             + ++R
Sbjct: 279 QDEDMKR 285

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  137 bits (346), Expect = 2e-37
 Identities = 79/361 (21%), Positives = 126/361 (34%), Gaps = 107/361 (29%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV----------RGIKKYREAAMI 142
                 Y+    +G G    V  C  +   +  A+KI+            +++ REA + 
Sbjct: 13  HGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK 72

Query: 143 EIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLV 201
           E+++L++++ H    N  +Q+++ ++      +VF+ +    L+D+L +           
Sbjct: 73  EVDILRKVSGHP---N-IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKET 126

Query: 202 REIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPK 261
           R+I R LLE I  +H L ++H DLKPEN+LL                             
Sbjct: 127 RKIMRALLEVICALHKLNIVHRDLKPENILLDD--------------------------- 159

Query: 262 SSAIKVIDFGSTTYERPDQNY--IVSTRHYRAPEVILGL------GWTYPCDIWSVGCIL 313
              IK+ DFG +    P +    +  T  Y APE+I         G+    D+WS G I+
Sbjct: 160 DMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219

Query: 314 VELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-----WPEG 368
             L  G   F  H                   ML+         +  G        W   
Sbjct: 220 YTLLAGSPPF-WHRK--------------QMLMLRM--------IMSGNYQFGSPEWD-- 254

Query: 369 AASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                                     +  D   L+   L   P  R TA EAL HPFF +
Sbjct: 255 ----------------------DYSDTVKD---LVSRFLVVQPQKRYTAEEALAHPFFQQ 289

Query: 429 D 429
            
Sbjct: 290 Y 290

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  137 bits (348), Expect = 5e-37
 Identities = 86/414 (20%), Positives = 146/414 (35%), Gaps = 111/414 (26%)

Query: 42  QEVGNVTSFAPPRAPSDHVTSSSLFVKGVARNGSPPWREDD---KDGHYMFALGENLTSR 98
           Q    + S     + S ++ + +  +      G+          +D    +A  +    +
Sbjct: 36  QRRAFIRSLRDDPSQSANLLAEAKKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQK 95

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIV---------RGIKKYREAAMIEIEVLQQ 149
           Y     +G G    V  C  R      A+KI+           +++ REA   E  +L+Q
Sbjct: 96  YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155

Query: 150 LAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL 208
           +A H       + + + ++  + + +VF+ +    L+D+L +           R I R L
Sbjct: 156 VAGH----PHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA--LSEKETRSIMRSL 209

Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
           LE ++F+H   ++H DLKPEN+LL                             +  I++ 
Sbjct: 210 LEAVSFLHANNIVHRDLKPENILLDD---------------------------NMQIRLS 242

Query: 269 DFGSTTYERPDQNY--IVSTRHYRAPEVILGL------GWTYPCDIWSVGCIL-VELCTG 319
           DFG + +  P +    +  T  Y APE++         G+    D+W+ G IL   L  G
Sbjct: 243 DFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLA-G 301

Query: 320 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-----WPEGAASRES 374
              F  H                   ML+         +  G+       W         
Sbjct: 302 SPPF-WHRR--------------QILMLRM--------IMEGQYQFSSPEWD-------- 330

Query: 375 IKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                               +  D   L+  LL+ DP  RLTA +AL+HPFF R
Sbjct: 331 ----------------DRSSTVKD---LISRLLQVDPEARLTAEQALQHPFFER 365

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  137 bits (347), Expect = 8e-37
 Identities = 82/341 (24%), Positives = 133/341 (39%), Gaps = 82/341 (24%)

Query: 93  ENLTSRYKIHSK--MGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQ 149
             + S Y +     +G G FGQV +C +      +A KI++    K +E    EI V+ Q
Sbjct: 83  GAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQ 142

Query: 150 LAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL 208
           L  H       +Q+ + F+ +N I +V E + G  L+D +   +Y +          +Q+
Sbjct: 143 L-DHA----NLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESY-NLTELDTILFMKQI 196

Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
            E I  MH + ++H DLKPEN+L V+                           +  IK+I
Sbjct: 197 CEGIRHMHQMYILHLDLKPENILCVN-------------------------RDAKQIKII 231

Query: 269 DFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
           DFG     +P +       T  + APEV+     ++P D+WSVG I   L +G + F   
Sbjct: 232 DFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPF--- 288

Query: 327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 386
                       LG      L          +   R D  +                   
Sbjct: 289 ------------LGDNDAETLNN--------ILACRWDLEDEE----------------- 311

Query: 387 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
              Q +   A +    +  LL  + + R++A EAL+HP+ +
Sbjct: 312 --FQDISEEAKE---FISKLLIKEKSWRISASEALKHPWLS 347

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  135 bits (341), Expect = 1e-36
 Identities = 71/371 (19%), Positives = 120/371 (32%), Gaps = 89/371 (23%)

Query: 73  NGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG 132
              PP  +          +G N  + ++I  K+G G F +V           VA+K V+ 
Sbjct: 8   MQGPPVPQFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQI 67

Query: 133 IK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDF 187
                 K R   + EI++L+QL  H    N  ++    F   N + IV E      L   
Sbjct: 68  FDLMDAKARADCIKEIDLLKQL-NHP---N-VIKYYASFIEDNELNIVLELADAGDLSRM 122

Query: 188 LR--KNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS 245
           ++  K   R  P   V +   QL   +  MH   ++H D+KP NV +             
Sbjct: 123 IKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT------------ 170

Query: 246 SLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPDQ--NYIVSTRHYRAPEVILGLGWTY 302
                           +  +K+ D G    +       + +V T +Y +PE I   G+ +
Sbjct: 171 ---------------ATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNF 215

Query: 303 PCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL-GPLPQHMLKRVDRHAEKYVRRG 361
             DIWS+GC+L E+   ++ F   + +   ++ +++     P                  
Sbjct: 216 KSDIWSLGCLLYEMAALQSPFYG-DKMNLYSLCKKIEQCDYPP----------------- 257

Query: 362 RLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 421
               P    S E          L+ L+                  +  DP  R       
Sbjct: 258 ---LPSDHYSEE----------LRQLVNM---------------CINPDPEKRPDVTYVY 289

Query: 422 RHPFFTRDHLR 432
                      
Sbjct: 290 DVAKRMHACTA 300

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  136 bits (344), Expect = 2e-36
 Identities = 47/424 (11%), Positives = 107/424 (25%), Gaps = 104/424 (24%)

Query: 37  GLFCGQEVGNVTSFAPPRAPSDHVTSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLT 96
           G    +++             + +   +  V+ V     P   E       + +L     
Sbjct: 7   GDSFMRDLLKREEELIGYCREEALKEPAAMVEAVTATVWPQNAETT-----VDSLLSQGE 61

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--------IKKYREAAMIEIEVLQ 148
            + K+   +  G    V    D ER E  A+K+           +++  EA      +L 
Sbjct: 62  RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG 121

Query: 149 QLAKHDKGGNRCVQIRNWFDYRNH-----------------ICIVFEKLGSSLYDFLRKN 191
           +  +  +   R +   +    ++                    ++       L       
Sbjct: 122 ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTL 181

Query: 192 NYRS-----FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS 246
           ++         I  +  +  QL+   A +    ++H    P+N+ ++             
Sbjct: 182 DFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIM------------- 228

Query: 247 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTY--PC 304
                             + + D  +                Y   E +     T+    
Sbjct: 229 --------------PDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHAL 274

Query: 305 DIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD 364
           + W +G  +  +      F                G +   +     R + +      L 
Sbjct: 275 NAWQLGLSIYRVWCLFLPF----------------GLVTPGIKGSWKRPSLRVPGTDSLA 318

Query: 365 WPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 424
           +       + +K+                        L+   L +D   RL   EA+  P
Sbjct: 319 FGSCTPLPDFVKT------------------------LIGRFLNFDRRRRLLPLEAMETP 354

Query: 425 FFTR 428
            F +
Sbjct: 355 EFLQ 358

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  134 bits (340), Expect = 2e-36
 Identities = 77/349 (22%), Positives = 128/349 (36%), Gaps = 105/349 (30%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKH 153
           RY     +G+G F +  E  D + KE+ A KIV    + K  +   +  EI + + L  H
Sbjct: 16  RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AH 74

Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEK-LGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
                  V    +F+  + + +V E     SL +  ++   ++      R   RQ++   
Sbjct: 75  ----QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGC 128

Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG- 271
            ++H   +IH DLK  N+ L         +    +                  K+ DFG 
Sbjct: 129 QYLHRNRVIHRDLKLGNLFL---------NEDLEV------------------KIGDFGL 161

Query: 272 STTYERPDQ---------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL 322
           +T  E   +         NYI       APEV+   G ++  D+WS+GCI+  L  G+  
Sbjct: 162 ATKVEYDGERKKVLCGTPNYI-------APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 214

Query: 323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP 382
           F+T   L              +    R        +++     P+               
Sbjct: 215 FET-SCL--------------KETYLR--------IKKNEYSIPK--------------- 236

Query: 383 RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 431
                   H++  A     L+Q +L+ DPT R T  E L   FFT  ++
Sbjct: 237 --------HINPVAAS---LIQKMLQTDPTARPTINELLNDEFFTSGYI 274

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score =  136 bits (345), Expect = 4e-36
 Identities = 87/385 (22%), Positives = 146/385 (37%), Gaps = 86/385 (22%)

Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIK-IVRGIKKYREAAMI--EIEVLQQL 150
           ++   Y I   +G G++G V   +D+  ++ VAIK + R  +   +   I  EI +L +L
Sbjct: 23  HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRL 82

Query: 151 AKHDKGGNRCVQIRNWF-----DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIA 205
            K D      +++ +          + + IV E   S L    +   + +   + ++ I 
Sbjct: 83  -KSD---Y-IIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLT--EEHIKTIL 135

Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPD------YKSSLHTPKDSSYFKRM 259
             LL    F+H+  +IH DLKP N LL     +KV D        S   T   +   +  
Sbjct: 136 YNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENE 195

Query: 260 PKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCT 318
                 K +    T++        V TR YRAPE+IL    +T   DIWS GCI  EL  
Sbjct: 196 EPGPHNKNLKKQLTSH--------VVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247

Query: 319 G-----------EALFQ-----------------THENLEHLAMMERVLGPLPQHMLKRV 350
                         LF                     N + L ++  ++G   +  LK +
Sbjct: 248 MLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNI 307

Query: 351 -DRHAEKYVR----RGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG 405
                 KY++    R  ++  +            K P         +     +L   L+ 
Sbjct: 308 NKPEVIKYIKLFPHRKPINLKQ------------KYP--------SISDDGINL---LES 344

Query: 406 LLRYDPTDRLTAREALRHPFFTRDH 430
           +L+++P  R+T  +AL HP+     
Sbjct: 345 MLKFNPNKRITIDQALDHPYLKDVR 369

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  134 bits (339), Expect = 5e-36
 Identities = 82/395 (20%), Positives = 136/395 (34%), Gaps = 116/395 (29%)

Query: 52  PPRAPSDHVTSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGEGTFG 111
           P +A    V +             P    D +              RY     +G+G F 
Sbjct: 7   PGKAGVPGVAAPGAPAAAPPAKEIPEVLVDPRSRR-----------RYVRGRFLGKGGFA 55

Query: 112 QVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKHDKGGNRCVQIRNWF 167
           +  E  D + KE+ A KIV    + K  +   +  EI + + L  H       V    +F
Sbjct: 56  KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AH----QHVVGFHGFF 110

Query: 168 DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLK 226
           +  + + +V E     SL +  ++   ++      R   RQ++    ++H   +IH DLK
Sbjct: 111 EDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 168

Query: 227 PENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTYERPDQ----- 280
             N+ L         +                      +K+ DFG +T  E   +     
Sbjct: 169 LGNLFL---------NEDLE------------------VKIGDFGLATKVEYDGERKKVL 201

Query: 281 ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
               NYI       APEV+   G ++  D+WS+GCI+  L  G+  F+T   L       
Sbjct: 202 CGTPNYI-------APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET-SCL------- 246

Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 396
                  +    R        +++     P+                       H++  A
Sbjct: 247 -------KETYLR--------IKKNEYSIPK-----------------------HINPVA 268

Query: 397 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 431
                L+Q +L+ DPT R T  E L   FFT  ++
Sbjct: 269 ---ASLIQKMLQTDPTARPTINELLNDEFFTSGYI 300

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  132 bits (335), Expect = 6e-36
 Identities = 64/354 (18%), Positives = 113/354 (31%), Gaps = 101/354 (28%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHD 154
            Y++   +G G++G+  +   +   +++  K +         ++  + E+ +L++L KH 
Sbjct: 7   DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHP 65

Query: 155 KGGNRCVQIRNWFDYR--NHICIVFEKL-GSSLYDFLR--KNNYRSFPIDLVREIARQLL 209
              N  V+  +    R    + IV E   G  L   +       +    + V  +  QL 
Sbjct: 66  ---N-IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLT 121

Query: 210 ECIAFMHDLC-----MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
             +   H        ++H DLKP NV L                                
Sbjct: 122 LALKECHRRSDGGHTVLHRDLKPANVFLD---------------------------GKQN 154

Query: 265 IKVIDFGSTTYERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 321
           +K+ DFG       D ++    V T +Y +PE +  + +    DIWS+GC+L ELC    
Sbjct: 155 VKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMP 214

Query: 322 LFQTHENLEHLAM--MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVM 379
            F    + + LA    E     +P                           S E      
Sbjct: 215 PFTA-FSQKELAGKIREGKFRRIPYRY------------------------SDE------ 243

Query: 380 KLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLRR 433
                              L  ++  +L      R +  E L +P    +H   
Sbjct: 244 -------------------LNEIITRMLNLKDYHRPSVEEILENPLI-LEHHHH 277

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  132 bits (335), Expect = 7e-36
 Identities = 65/351 (18%), Positives = 111/351 (31%), Gaps = 83/351 (23%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHD 154
           + ++    +G G FG V E  ++      AIK +R    +  RE  M E++ L +L +H 
Sbjct: 5   TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-EHP 63

Query: 155 KGGNRCVQIRNWFD-----------YRNHICIVFEKL--GSSLYDFLRKNNYRSFP-IDL 200
                      W +            + ++ I  + L    +L D++            +
Sbjct: 64  ---GIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQ-LCRKENLKDWMNGRCTIEERERSV 119

Query: 201 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 260
              I  Q+ E + F+H   ++H DLKP N+     + +KV D+               M 
Sbjct: 120 CLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLV----------TAMD 169

Query: 261 KSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 320
           +    +     +           V T+ Y +PE I G  +++  DI+S+G IL EL    
Sbjct: 170 QDEEEQ--TVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYP- 226

Query: 321 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK 380
             F T                                VR                    K
Sbjct: 227 --FSTQMERVRTLTD----------------------VRNL------------------K 244

Query: 381 LPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 431
            P L                 ++Q +L   P +R  A   + +  F     
Sbjct: 245 FPPLFTQKYP-------CEYVMVQDMLSPSPMERPEAINIIENAVFEDLDF 288

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  137 bits (347), Expect = 2e-35
 Identities = 69/341 (20%), Positives = 112/341 (32%), Gaps = 64/341 (18%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDK 155
            +++  ++G G FG VL    ++  E VAIK  R     K RE   +EI+++++L  H  
Sbjct: 15  PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL-NHP- 72

Query: 156 GGN-----RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKN-NYRSFPIDLVREIARQL 208
             N                 +   +  E   G  L  +L +  N        +R +   +
Sbjct: 73  --NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDI 130

Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
              + ++H+  +IH DLKPEN++L                            +    K+I
Sbjct: 131 SSALRYLHENRIIHRDLKPENIVLQPGP------------------------QRLIHKII 166

Query: 269 DFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
           D G        +     V T  Y APE++    +T   D WS G +  E  TG       
Sbjct: 167 DLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGF------ 220

Query: 327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 386
                           P     +  +   K   +             ++K    LP   +
Sbjct: 221 ---------------RPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNH 265

Query: 387 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
           L        AG L   LQ +L +    R T  +      F 
Sbjct: 266 LSGI----LAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQ 302

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  131 bits (331), Expect = 2e-35
 Identities = 70/348 (20%), Positives = 127/348 (36%), Gaps = 104/348 (29%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKH 153
            +K+ + +G+G+F  V           VAIK++  + + K      +  E+++  QL KH
Sbjct: 12  DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-KH 70

Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
                  +++ N+F+  N++ +V E      +  +L+    + F  +  R    Q++  +
Sbjct: 71  ----PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGM 125

Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG- 271
            ++H   ++H DL   N+LL             +                  IK+ DFG 
Sbjct: 126 LYLHSHGILHRDLTLSNLLL---------TRNMN------------------IKIADFGL 158

Query: 272 STTYERPDQ---------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL 322
           +T  + P +         NYI       +PE+          D+WS+GC+   L  G   
Sbjct: 159 ATQLKMPHEKHYTLCGTPNYI-------SPEIATRSAHGLESDVWSLGCMFYTLLIGRPP 211

Query: 323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP 382
           F T + +              ++ L +        V     + P                
Sbjct: 212 FDT-DTV--------------KNTLNK--------VVLADYEMPS--------------- 233

Query: 383 RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
                    +   A D   L+  LLR +P DRL+    L HPF +R+ 
Sbjct: 234 --------FLSIEAKD---LIHQLLRRNPADRLSLSSVLDHPFMSRNS 270

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  129 bits (327), Expect = 2e-34
 Identities = 65/345 (18%), Positives = 103/345 (29%), Gaps = 92/345 (26%)

Query: 96  TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK 155
                   ++G G+FG+V    D++     A+K VR         + E+     L     
Sbjct: 57  VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVR----LEVFRVEELVACAGL-SSP- 110

Query: 156 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
              R V +         + I  E L G SL   +++      P D       Q LE + +
Sbjct: 111 ---RIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEY 165

Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG--- 271
           +H   ++H D+K +NVLL                              S   + DFG   
Sbjct: 166 LHTRRILHGDVKADNVLL--------------------------SSDGSRAALCDFGHAL 199

Query: 272 -----STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
                         +YI  T  + APEV++G       DIWS  C+++ +  G       
Sbjct: 200 CLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG------- 252

Query: 327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 386
               H         P  Q+                                 +K+     
Sbjct: 253 ---CH---------PWTQY---------------------------FRGPLCLKIASEPP 273

Query: 387 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 431
            I +     A      +Q  LR +P  R +A E  R        +
Sbjct: 274 PIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV 318

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score =  128 bits (324), Expect = 5e-34
 Identities = 77/398 (19%), Positives = 135/398 (33%), Gaps = 112/398 (28%)

Query: 48  TSFAPPRAPSDHVTSSSLFVKGVARNGSPPWREDDKDGHYMFALGENLTSRYKIHSKMGE 107
           +S       S  V   S        + +      +K         E L S+Y++   +G 
Sbjct: 3   SSHHHHHHSSGLVPRGSHMAPCNDLHATKLAPGKEK---------EPLESQYQVGPLLGS 53

Query: 108 GTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI-----EIEVLQQLAKHDKGGNRC 160
           G FG V           VAIK V    I  + E         E+ +L+++      G   
Sbjct: 54  GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV-SSGFSG--V 110

Query: 161 VQIRNWFDYRNHICIVFEKLGSS--LYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 218
           +++ +WF+  +   ++ E+      L+DF+ +    +   +L R    Q+LE +   H+ 
Sbjct: 111 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC 168

Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
            ++H D+K EN+L+                   D +  +       +K+IDFGS      
Sbjct: 169 GVLHRDIKDENILI-------------------DLNRGE-------LKLIDFGSGALL-K 201

Query: 279 DQNYIVS--TRHYRAPEVILGLGWTY---PCDIWSVGCILVELCTGEALFQTHENLEHLA 333
           D  Y     TR Y  PE I      Y      +WS+G +L ++  G+  F          
Sbjct: 202 DTVYTDFDGTRVYSPPEWIRYHR--YHGRSAAVWSLGILLYDMVCGDIPF---------- 249

Query: 334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 393
                                ++ + RG++ +                            
Sbjct: 250 -------------------EHDEEIIRGQVFFR--------------------------Q 264

Query: 394 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 431
             + +  HL++  L   P+DR T  E   HP+     L
Sbjct: 265 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 302

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score =  127 bits (320), Expect = 1e-33
 Identities = 70/348 (20%), Positives = 130/348 (37%), Gaps = 108/348 (31%)

Query: 93  ENLTSRYKIHSKM-GEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLA 151
             +   YK+ S++ G G  G+VL+ +++  +E  A+K+++   K R     E+E+  + +
Sbjct: 13  NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRAS 68

Query: 152 KHDKGGNRCVQIRNWFD----YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIAR 206
           +     +  V+I + ++     R  + IV E L G  L+  ++    ++F      EI +
Sbjct: 69  QCP---H-IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK 124

Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
            + E I ++H + + H D+KPEN+L  S                           ++ +K
Sbjct: 125 SIGEAIQYLHSINIAHRDVKPENLLYTSKR------------------------PNAILK 160

Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
           + DFG                   A E   G  +   CD+WS+G I+  L  G   F ++
Sbjct: 161 LTDFG------------------FAKET-TGEKYDKSCDMWSLGVIMYILLCGYPPFYSN 201

Query: 327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD-----WPEGAASRESIKSVMKL 381
                          +   M  R        +R G+ +     W                
Sbjct: 202 HG-----------LAISPGMKTR--------IRMGQYEFPNPEWS--------------- 227

Query: 382 PRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                     V         L++ LL+ +PT R+T  E + HP+  + 
Sbjct: 228 ---------EVSEEVKM---LIRNLLKTEPTQRMTITEFMNHPWIMQS 263

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  125 bits (317), Expect = 2e-33
 Identities = 70/338 (20%), Positives = 128/338 (37%), Gaps = 87/338 (25%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAK 152
             ++I   +G+G FG V    +++ K ++A+K++    ++K      +  E+E+   L +
Sbjct: 9   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-R 67

Query: 153 HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
           H       +++  +F     + ++ E     ++Y  L+K     F          +L   
Sbjct: 68  HPN----ILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANA 121

Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           +++ H   +IH D+KPEN+LL S+  +K+ D+  S+H P      +R             
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRT------------ 165

Query: 272 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 331
                  D         Y  PE+I G       D+WS+G +  E   G+  F+ +     
Sbjct: 166 -DLCGTLD---------YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT---- 211

Query: 332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH 391
                       Q   KR        + R    +P+                        
Sbjct: 212 -----------YQETYKR--------ISRVEFTFPD-----------------------F 229

Query: 392 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
           V   A D   L+  LL+++P+ R   RE L HP+ T +
Sbjct: 230 VTEGARD---LISRLLKHNPSQRPMLREVLEHPWITAN 264

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  126 bits (318), Expect = 3e-33
 Identities = 56/355 (15%), Positives = 102/355 (28%), Gaps = 103/355 (29%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY-REAAMIEIEVLQQLAKHDKG 156
            Y    K+GEG F  V            A+K +   ++  RE A  E ++ +    H   
Sbjct: 30  HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLF-NHP-- 86

Query: 157 GNRCVQIRNWF----DYRNHICIVFE-KLGSSLYDFL--RKNNYRSFPIDLVREIARQLL 209
            N  +++  +       ++   ++       +L++ +   K+       D +  +   + 
Sbjct: 87  -N-ILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGIC 144

Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
             +  +H     H DLKP N+LL                                  ++D
Sbjct: 145 RGLEAIHAKGYAHRDLKPTNILLG---------------------------DEGQPVLMD 177

Query: 270 FGSTTYERP------------DQNYIVSTRHYRAPEVI---LGLGWTYPCDIWSVGCILV 314
            GS                  D      T  YRAPE+             D+WS+GC+L 
Sbjct: 178 LGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLY 237

Query: 315 ELCTGEALFQ-THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRE 373
            +  GE  +    +  + +A+                         + +L  P+    R 
Sbjct: 238 AMMFGEGPYDMVFQKGDSVAL-----------------------AVQNQLSIPQS--PRH 272

Query: 374 SIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           S         L  L+                 ++  DP  R      L      +
Sbjct: 273 S-------SALWQLL---------------NSMMTVDPHQRPHIPLLLSQLEALQ 305

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  125 bits (316), Expect = 3e-33
 Identities = 66/363 (18%), Positives = 135/363 (37%), Gaps = 92/363 (25%)

Query: 79  REDDKDGHYMFALGENLTSRY-KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIK 134
           ++DD +     A+G +   R+ K   ++G G+F  V +  D E    VA   ++     K
Sbjct: 7   QQDDIEELETKAVGMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK 66

Query: 135 KYREAAMIEIEVLQQLAKHDKGGNRCVQ-IRNWFDY---RNHICIVFEKLGS-SLYDFLR 189
             R+    E E+L+ L +H       V+   +W      +  I +V E + S +L  +L+
Sbjct: 67  SERQRFKEEAEMLKGL-QHP----NIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLK 121

Query: 190 KNNYRSFPIDLVREIARQLLECIAFMH--DLCMIHTDLKPENVLLVSSEYIKVPDYKSSL 247
           +  ++   I ++R   RQ+L+ + F+H     +IH DLK +N+ +               
Sbjct: 122 R--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFI--------------- 164

Query: 248 HTPKDSSYFKRMPKSSAIKVIDFG-STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDI 306
                         + ++K+ D G +T         ++ T  + APE+     +    D+
Sbjct: 165 -----------TGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDV 212

Query: 307 WSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWP 366
           ++ G  ++E+ T E  +   +N     +  RV   +                        
Sbjct: 213 YAFGMCMLEMATSEYPYSECQNAA--QIYRRVTSGVKPASF------------------- 251

Query: 367 EGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
                 + +      P ++ +I                  +R +  +R + ++ L H FF
Sbjct: 252 ------DKVAI----PEVKEIIEG---------------CIRQNKDERYSIKDLLNHAFF 286

Query: 427 TRD 429
             +
Sbjct: 287 QEE 289

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  124 bits (313), Expect = 8e-33
 Identities = 69/338 (20%), Positives = 121/338 (35%), Gaps = 87/338 (25%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAK 152
             + I   +G+G FG V    +++ K ++A+K++    ++K      +  EIE+   L +
Sbjct: 14  DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-R 72

Query: 153 HDKGGNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
           H       +++ N+F  R  I ++ E      LY  L+K+    F          +L + 
Sbjct: 73  HPN----ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH--GRFDEQRSATFMEELADA 126

Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           + + H+  +IH D+KPEN+L+     +K+ D+  S+H P      +R             
Sbjct: 127 LHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL----RRR------------ 170

Query: 272 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 331
            T     D         Y  PE+I G       D+W  G +  E   G   F +     H
Sbjct: 171 -TMCGTLD---------YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSP---SH 217

Query: 332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH 391
                R++                       L +P                         
Sbjct: 218 TETHRRIV--------------------NVDLKFPP-----------------------F 234

Query: 392 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
           +   + D   L+  LLRY P  RL  +  + HP+   +
Sbjct: 235 LSDGSKD---LISKLLRYHPPQRLPLKGVMEHPWVKAN 269

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score =  123 bits (312), Expect = 2e-32
 Identities = 63/352 (17%), Positives = 115/352 (32%), Gaps = 101/352 (28%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI-----EIE 145
           E   + Y++   +G+G FG V        +  VAIK++    +  +   +       E+ 
Sbjct: 27  EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVA 86

Query: 146 VLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVRE 203
           +L ++          +++ +WF+ +    +V E       L+D++ +           R 
Sbjct: 87  LLWKVGAGGGHPG-VIRLLDWFETQEGFMLVLERPLPAQDLFDYITEK--GPLGEGPSRC 143

Query: 204 IARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSS 263
              Q++  I   H   ++H D+K EN+L+                   D        +  
Sbjct: 144 FFGQVVAAIQHCHSRGVVHRDIKDENILI-------------------DL-------RRG 177

Query: 264 AIKVIDFGSTTYERPDQNYIVS--TRHYRAPEVILGLGWTY---PCDIWSVGCILVELCT 318
             K+IDFGS      D+ Y     TR Y  PE I      Y   P  +WS+G +L ++  
Sbjct: 178 CAKLIDFGSGAL-LHDEPYTDFDGTRVYSPPEWISRHQ--YHALPATVWSLGILLYDMVC 234

Query: 319 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSV 378
           G+  F                               ++ +    L +P            
Sbjct: 235 GDIPF-----------------------------ERDQEILEAELHFPA----------- 254

Query: 379 MKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
                          H + D   L++  L   P+ R +  E L  P+     
Sbjct: 255 ---------------HVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPA 291

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  123 bits (310), Expect = 6e-32
 Identities = 68/357 (19%), Positives = 110/357 (30%), Gaps = 110/357 (30%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKG 156
           R ++   + EG F  V E  D       A+K +    ++   A + E+  +++L+ H   
Sbjct: 29  RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHP-- 86

Query: 157 GN------RCVQIRNWFDYRNHICIVFEKL--GSSLYDFLRKNNYRSFPIDLVREIARQL 208
            N           +   D      ++  +L  G  +    +  +      D V +I  Q 
Sbjct: 87  -NIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQT 145

Query: 209 LECIAFMHDL--CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
              +  MH     +IH DLK EN+LL                                IK
Sbjct: 146 CRAVQHMHRQKPPIIHRDLKVENLLLS---------------------------NQGTIK 178

Query: 267 VIDFGSTTYERPDQNYIVS-----------TRH----YRAPEVI---LGLGWTYPCDIWS 308
           + DFGS T      +Y  S           TR+    YR PE+I            DIW+
Sbjct: 179 LCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWA 238

Query: 309 VGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEG 368
           +GCIL  LC  +  F+    L                            +  G+   P  
Sbjct: 239 LGCILYLLCFRQHPFEDGAKLR---------------------------IVNGKYSIP-- 269

Query: 369 AASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 425
                                 H          L++ +L+ +P +RL+  E +    
Sbjct: 270 ---------------------PHDTQYT-VFHSLIRAMLQVNPEERLSIAEVVHQLQ 304

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  122 bits (307), Expect = 6e-32
 Identities = 59/249 (23%), Positives = 99/249 (39%), Gaps = 41/249 (16%)

Query: 81  DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR-GIKKYREA 139
           ++ D        +           +G+GT+G V    D   +  +AIK +     +Y + 
Sbjct: 6   EEGDCESDLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP 65

Query: 140 AMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPI 198
              EI + + L KH       VQ    F     I I  E++ G SL   L ++ +     
Sbjct: 66  LHEEIALHKHL-KHK----NIVQYLGSFSENGFIKIFMEQVPGGSLSALL-RSKWGPLKD 119

Query: 199 D--LVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF 256
           +   +    +Q+LE + ++HD  ++H D+K +NVL+                        
Sbjct: 120 NEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLI------------------------ 155

Query: 257 KRMPKSSAIKVIDFGS---TTYERPDQNYIVSTRHYRAPEVILGL--GWTYPCDIWSVGC 311
                S  +K+ DFG+        P       T  Y APE+I     G+    DIWS+GC
Sbjct: 156 --NTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGC 213

Query: 312 ILVELCTGE 320
            ++E+ TG+
Sbjct: 214 TIIEMATGK 222

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  122 bits (307), Expect = 2e-31
 Identities = 60/362 (16%), Positives = 123/362 (33%), Gaps = 94/362 (25%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI------------- 142
            Y+I   + +G F +++ C   +  +  A+K      ++K R+                 
Sbjct: 32  DYRIIRTLNQGKFNKIILC--EKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDD 89

Query: 143 ---EIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNY----- 193
              E++++  + K++     C+         + + I++E +   S+  F           
Sbjct: 90  FKNELQIITDI-KNE---Y-CLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY 144

Query: 194 -RSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK 251
               PI +++ I + +L   +++H+   + H D+KP N+L+         D         
Sbjct: 145 TCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM---------DKNGR----- 190

Query: 252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVS--TRHYRAPEVILGLGWTY--PCDIW 307
                        +K+ DFG + Y   D+    S  T  +  PE             DIW
Sbjct: 191 -------------VKLSDFGESEY-MVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIW 236

Query: 308 SVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE 367
           S+G  L  +      F    +L                +           +R   +++P 
Sbjct: 237 SLGICLYVMFYNVVPFSLKISL--------------VELFNN--------IRTKNIEYPL 274

Query: 368 GAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
                    +  K     N     + +   D    L+  LR +P +R+T+ +AL+H +  
Sbjct: 275 DRNHFLYPLTNKKSTCSNN----FLSNEDID---FLKLFLRKNPAERITSEDALKHEWLA 327

Query: 428 RD 429
             
Sbjct: 328 DT 329

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  116 bits (292), Expect = 3e-29
 Identities = 49/367 (13%), Positives = 108/367 (29%), Gaps = 127/367 (34%)

Query: 106 GEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAM------IEIEVLQQLAKHDKGGNR 159
           G+      LE  D+E  E   + +    ++    A+      +    L +  K+ K    
Sbjct: 82  GQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKV 141

Query: 160 CVQIRNWFD--------------------YRNHICIVFEKLGSSLYDFL-----RKNNYR 194
            ++    FD                    +      ++ ++ S+L  F        + ++
Sbjct: 142 HLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHK 201

Query: 195 SFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS 254
           S       ++  Q++  +A +H   ++HT L+P +++L                      
Sbjct: 202 SLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLD--------------------- 240

Query: 255 YFKRMPKSSAIKVIDFGSTTYERPDQNYIVS--TRHYRAPEVILGLGW-----------T 301
                 +   + +  F        D   +VS  +R +  PE+                 T
Sbjct: 241 ------QRGGVFLTGFEHL---VRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMT 291

Query: 302 YPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG 361
           +  D W++G ++  +   +    T +     +                      +++ R 
Sbjct: 292 FSFDAWALGLVIYWIWCADLPI-TKDAALGGS----------------------EWIFRS 328

Query: 362 RLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 421
             + P+                                  LL+G LRY   DRL   +A+
Sbjct: 329 CKNIPQPVR------------------------------ALLEGFLRYPKEDRLLPLQAM 358

Query: 422 RHPFFTR 428
             P + +
Sbjct: 359 ETPEYEQ 365

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score =  114 bits (286), Expect = 1e-28
 Identities = 72/390 (18%), Positives = 121/390 (31%), Gaps = 124/390 (31%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLA--- 151
           + ++    MG G FG V E  ++      AIK +R    +  RE  M E++ L +L    
Sbjct: 6   TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65

Query: 152 ----------------------------------KHDKGGNRCVQIRNWFDYRNHICIVF 177
                                                   +         D  +    V 
Sbjct: 66  IVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVG 125

Query: 178 EKLGSS----LY------------DFLRKNNYRSFP-IDLVREIARQLLECIAFMHDLCM 220
           +   SS    LY            D++ +          +   I  Q+ E + F+H   +
Sbjct: 126 QLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGL 185

Query: 221 IHTDLKPENVLLVSSEYIKVPDY---KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
           +H DLKP N+     + +KV D+    +     ++ +    MP  +              
Sbjct: 186 MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA-------------- 231

Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 337
                 V T+ Y +PE I G  +++  DI+S+G IL EL      F T         MER
Sbjct: 232 -THTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS---FSTQ--------MER 279

Query: 338 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 397
           V       ++          VR  +   P             K P+   ++         
Sbjct: 280 V------RIITD--------VRNLKF--PLL--------FTQKYPQEHMMVQD------- 308

Query: 398 DLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
                   +L   PT+R  A + + +  F 
Sbjct: 309 --------MLSPSPTERPEATDIIENAIFE 330

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score =  112 bits (282), Expect = 5e-28
 Identities = 72/347 (20%), Positives = 125/347 (36%), Gaps = 105/347 (30%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI----------EIEVL 147
           +Y   S +G G FG V    D+E+ + V +K ++  +K  E   I          EI +L
Sbjct: 25  KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIK-KEKVLEDCWIEDPKLGKVTLEIAIL 83

Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSS--LYDFLRKNNYRSFPIDLVREIA 205
            ++ +H       +++ + F+ +    +V EK GS   L+ F+ ++        L   I 
Sbjct: 84  SRV-EHAN----IIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRH--PRLDEPLASYIF 136

Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 265
           RQL+  + ++    +IH D+K EN+++                      +         I
Sbjct: 137 RQLVSAVGYLRLKDIIHRDIKDENIVI-------------------AEDF--------TI 169

Query: 266 KVIDFGSTTYERPDQNYIVS--TRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEAL 322
           K+IDFGS  Y    + +     T  Y APEV++G  +  P  ++WS+G  L  L   E  
Sbjct: 170 KLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEE-- 227

Query: 323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP 382
                               P   L+              +  P                
Sbjct: 228 -------------------NPFCELEE--------TVEAAIHPP---------------- 244

Query: 383 RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                        + +L  L+ GLL+  P  R T  + +  P+ T+ 
Sbjct: 245 ----------YLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQP 281

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score =  107 bits (269), Expect = 4e-26
 Identities = 64/338 (18%), Positives = 118/338 (34%), Gaps = 50/338 (14%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI--EIEVLQQLAKHDKG 156
           ++  S++G G  G V +   +    ++A K++    K      I  E++VL +       
Sbjct: 35  FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE------- 87

Query: 157 GNRCVQIRNW---FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
                 I  +   F     I I  E + G SL   L+K      P  ++ +++  +++ +
Sbjct: 88  -CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGL 144

Query: 213 AFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
            ++ +   ++H D+KP N+L+ S                              IK+ DFG
Sbjct: 145 TYLREKHKIMHRDVKPSNILVNSR---------------------------GEIKLCDFG 177

Query: 272 -STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
            S        N  V TR Y +PE + G  ++   DIWS+G  LVE+  G       +  E
Sbjct: 178 VSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 237

Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
              M    +         R         R       +        + +  +       + 
Sbjct: 238 LELMFGCQVEGDAAETPPR----PRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLP 293

Query: 391 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
               S  +    +   L  +P +R   ++ + H F  R
Sbjct: 294 SGVFSL-EFQDFVNKCLIKNPAERADLKQLMVHAFIKR 330

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score =  106 bits (266), Expect = 8e-26
 Identities = 66/346 (19%), Positives = 117/346 (33%), Gaps = 90/346 (26%)

Query: 92  GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV-RGIKKYREAAMI--EIEVLQ 148
            +     Y++   +G+G F +V           VAIKI+ +          +  E+ +++
Sbjct: 10  EQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMK 69

Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 207
            L  H       V++    +    + ++ E   G  ++D+L  +          R   RQ
Sbjct: 70  IL-NHP----NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQ 122

Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           ++  + + H   ++H DLK EN+LL         D   +                  IK+
Sbjct: 123 IVSAVQYCHQKRIVHRDLKAENLLL---------DADMN------------------IKI 155

Query: 268 IDFGSTTYERPDQNYIVS--TRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQ 324
            DFG +                 Y APE+  G  +  P  D+WS+G IL  L +G   F 
Sbjct: 156 ADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215

Query: 325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL 384
             +NL+ L                       + V RG+   P                  
Sbjct: 216 -GQNLKEL----------------------RERVLRGKYRIPF----------------- 235

Query: 385 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
                    + + D  +LL+  L  +P  R T  + ++  +    H
Sbjct: 236 ---------YMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGH 272

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  107 bits (268), Expect = 9e-26
 Identities = 57/419 (13%), Positives = 115/419 (27%), Gaps = 131/419 (31%)

Query: 51  APPRAPSDHVTSSSLFVKGVARNGSPPWREDDKDGHY-MFALGENLTSRYKIHSKMGEGT 109
               +      + SL    +   G P   E +          G  L          G+  
Sbjct: 41  VRTTSEYMQSAADSLVSTSLWNTGQPFRVESELGERPRTLVRGTVL----------GQED 90

Query: 110 FGQVLECWDRERKEMVAIKIVR--------GIKKYREAAMIE------------IEVLQQ 149
               LE  D+E  E   + +           IK+ +E  +                 L+ 
Sbjct: 91  PYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRF 150

Query: 150 LAKHD--KGGNRCVQIRNWFDYRNH----ICIVFEKLGSSLYDFL-----RKNNYRSFPI 198
           +   D  K   +   IR   D R+        ++ ++ S+L  F        + ++S   
Sbjct: 151 IFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVH 210

Query: 199 DLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKR 258
               ++  Q++  +A +H   ++HT L+P +++L                          
Sbjct: 211 HARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLD------------------------- 245

Query: 259 MPKSSAIKVIDFGSTTYE----RPDQNYIVSTRHYRAPEVILGLG-----WTYPCDIWSV 309
             +   + +  F     +            +     A  ++          T+  D W++
Sbjct: 246 --QRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTL 303

Query: 310 GCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGA 369
           G  +  +   +    T +    L   E +                     R   + P+  
Sbjct: 304 GLAIYWIWCADLPN-TDDAA--LGGSEWIF--------------------RSCKNIPQPV 340

Query: 370 ASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
            +                              LL+G LRY   DRL   +A+  P + +
Sbjct: 341 RA------------------------------LLEGFLRYPKEDRLLPLQAMETPEYEQ 369

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score =  105 bits (263), Expect = 1e-25
 Identities = 69/357 (19%), Positives = 128/357 (35%), Gaps = 115/357 (32%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-----EIEVLQQLAK 152
           +Y +   +GEG++G+V E  D E     A+KI++  K  R          EI++L++L +
Sbjct: 6   KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-R 64

Query: 153 HDKGGNRCVQIRN--------WFDYRNHICIVFE--KLGSS-LYDFLRKNNYRSFPIDLV 201
           H          +N        + + +  + +V E    G   + D + +   + FP+   
Sbjct: 65  H----------KNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPE---KRFPVCQA 111

Query: 202 REIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPK 261
                QL++ + ++H   ++H D+KP N+LL             +               
Sbjct: 112 HGYFCQLIDGLEYLHSQGIVHKDIKPGNLLL---------TTGGT--------------- 147

Query: 262 SSAIKVIDFG-STTYERPDQNYIVSTR----HYRAPEVILGLGWTY---PCDIWSVGCIL 313
              +K+   G +        +    T      ++ PE+  GL  T+     DIWS G  L
Sbjct: 148 ---LKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLD-TFSGFKVDIWSAGVTL 203

Query: 314 VELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRE 373
             + TG   F+  +N+  L                       + + +G    P       
Sbjct: 204 YNITTGLYPFE-GDNIYKLF----------------------ENIGKGSYAIP------- 233

Query: 374 SIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
                                    L+ LL+G+L Y+P  R + R+  +H +F + H
Sbjct: 234 -------------------GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKH 271

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score =  104 bits (262), Expect = 3e-25
 Identities = 73/340 (21%), Positives = 126/340 (37%), Gaps = 90/340 (26%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKH 153
            Y I   +GEG+FG+V      + ++ VA+K +  + +KK      +  EI  L+ L +H
Sbjct: 10  PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-RH 68

Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                  +++ +       I +V E  G  L+D++ +   +    D  R   +Q++  I 
Sbjct: 69  P----HIIKLYDVITTPTDIVMVIEYAGGELFDYIVEK--KRMTEDEGRRFFQQIICAIE 122

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           + H   ++H DLKPEN+LL         D   +                  +K+ DFG +
Sbjct: 123 YCHRHKIVHRDLKPENLLL---------DDNLN------------------VKIADFGLS 155

Query: 274 TYERPDQNYIVS--TRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHENLE 330
                      S  + +Y APEVI G  +  P  D+WS G +L  +  G   F   E + 
Sbjct: 156 NIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD-DEFI- 213

Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
                         ++ K+        V       P                        
Sbjct: 214 -------------PNLFKK--------VNSCVYVMP------------------------ 228

Query: 391 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
             D  +     L++ ++  DP  R+T +E  R P+F  + 
Sbjct: 229 --DFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNL 266

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =  104 bits (262), Expect = 5e-25
 Identities = 57/341 (16%), Positives = 116/341 (34%), Gaps = 33/341 (9%)

Query: 96  TSRYKIHSKMGEG--TFGQVLECWDRERKEMVAIKIV---RGIKKYREAAMIEIEVLQQL 150
              Y++ + +G+G      V     +   E V ++ +       +       E+ V +  
Sbjct: 24  GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF 83

Query: 151 AKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLL 209
             H    N  V  R  F   N + +V   +   S  D +  +         +  I + +L
Sbjct: 84  -NHP---N-IVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVL 138

Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
           + + ++H +  +H  +K  ++L+     + +   +S+       S      +   +    
Sbjct: 139 KALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSN------LSMISHGQRQRVVHDF- 191

Query: 270 FGSTTYERPDQNYIVSTRHYRAPEVI--LGLGWTYPCDIWSVGCILVELCTGEALFQTHE 327
                       Y V    + +PEV+     G+    DI+SVG    EL  G   F+   
Sbjct: 192 ----------PKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP 241

Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
             +   ++E++ G +P  +        E  +   R     G +   +  +          
Sbjct: 242 ATQ--MLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPS 299

Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
              H   S     H ++  L+ +P  R +A   L H FF +
Sbjct: 300 HPYHRTFSP-HFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 339

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score =  101 bits (254), Expect = 4e-24
 Identities = 71/336 (21%), Positives = 111/336 (33%), Gaps = 79/336 (23%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG 157
           RY     +G G FG      D+  KE+VA+K +       E    EI   + L +H    
Sbjct: 21  RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSL-RHP--- 76

Query: 158 NRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 216
              V+ +       H+ I+ E   G  LY+ +       F  D  R   +QLL  +++ H
Sbjct: 77  -NIVRFKEVILTPTHLAIIMEYASGGELYERICNA--GRFSEDEARFFFQQLLSGVSYCH 133

Query: 217 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 276
            + + H DLK EN LL                   D S   R      +K+ DFG +   
Sbjct: 134 SMQICHRDLKLENTLL-------------------DGSPAPR------LKICDFGYSKSS 168

Query: 277 RPDQ--NYIVSTRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHENLEHLA 333
                    V T  Y APEV+L   +     D+WS G  L  +  G   F+         
Sbjct: 169 VLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFE-DPEEPRDY 227

Query: 334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 393
                             R   + +   +   P+                          
Sbjct: 228 ------------------RKTIQRILSVKYSIPDDI------------------------ 245

Query: 394 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
             + +  HL+  +   DP  R++  E   H +F ++
Sbjct: 246 RISPECCHLISRIFVADPATRISIPEIKTHSWFLKN 281

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 99.2 bits (248), Expect = 8e-24
 Identities = 76/342 (22%), Positives = 124/342 (36%), Gaps = 95/342 (27%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKH 153
            Y +   +G GTFG+V     +     VA+KI+  + I+       I  EI+ L+   +H
Sbjct: 12  HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF-RH 70

Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
                  +++           +V E + G  L+D++ K+          R + +Q+L  +
Sbjct: 71  P----HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR--VEEMEARRLFQQILSAV 124

Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
            + H   ++H DLKPENVLL         D   +                   K+ DFG 
Sbjct: 125 DYCHRHMVVHRDLKPENVLL---------DAHMN------------------AKIADFGL 157

Query: 273 TTYERPDQNYIVSTR----HYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHE 327
           +      +   + T     +Y APEVI G  +  P  DIWS G IL  L  G   F   E
Sbjct: 158 SNMMSDGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD-DE 214

Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           ++                + K+        +R G    P                     
Sbjct: 215 HV--------------PTLFKK--------IRGGVFYIP--------------------- 231

Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                ++    +  LL  +L+ DP  R T ++   H +F +D
Sbjct: 232 -----EYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQD 268

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 98.9 bits (247), Expect = 2e-23
 Identities = 58/242 (23%), Positives = 97/242 (40%), Gaps = 43/242 (17%)

Query: 100 KIHSKMGEGTFGQVLE-CWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++   +G G FG V +  W   R + VAIK +   +  R+A ++E+  L ++  H     
Sbjct: 11  EVEEVVGRGAFGVVCKAKW---RAKDVAIKQIES-ESERKAFIVELRQLSRV-NHP---- 61

Query: 159 RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRS-FPIDLVREIARQLLECIAFMH 216
             V++       N +C+V E   G SLY+ L        +          Q  + +A++H
Sbjct: 62  NIVKLYGA--CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 119

Query: 217 DLC---MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
            +    +IH DLKP N+LLV+   +                          +K+ DFG+ 
Sbjct: 120 SMQPKALIHRDLKPPNLLLVAGGTV--------------------------LKICDFGTA 153

Query: 274 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 333
              +        +  + APEV  G  ++  CD++S G IL E+ T    F          
Sbjct: 154 CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRI 213

Query: 334 MM 335
           M 
Sbjct: 214 MW 215

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 98.5 bits (246), Expect = 3e-23
 Identities = 66/332 (19%), Positives = 113/332 (34%), Gaps = 89/332 (26%)

Query: 106 GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAA--MIEIEVLQQLAKHDKGGNRCV 161
           GEG+F  V+   +       AIKI+    I K  +      E +V+ +L  H       V
Sbjct: 39  GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP----FFV 93

Query: 162 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           ++   F     +           L  ++RK    SF     R    +++  + ++H   +
Sbjct: 94  KLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGKGI 151

Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 280
           IH DLKPEN+LL    +I++ D+ ++          K +            +        
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTA----------KVLSP------ESKQARANS---- 191

Query: 281 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLG 340
              V T  Y +PE++         D+W++GCI+ +L  G   F    N     + ++++ 
Sbjct: 192 --FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGN--EYLIFQKII- 245

Query: 341 PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT 400
                              +   D+P                       +     A D  
Sbjct: 246 -------------------KLEYDFP-----------------------EKFFPKARD-- 261

Query: 401 HLLQGLLRYDPTDRLT------AREALRHPFF 426
            L++ LL  D T RL             HPFF
Sbjct: 262 -LVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 97.3 bits (243), Expect = 3e-23
 Identities = 59/256 (23%), Positives = 94/256 (36%), Gaps = 54/256 (21%)

Query: 100 KIHSKMGEGTFGQVLE-CWDRERKEMVAIKIVRGIKKYREAAMI-----EIEVLQQLAKH 153
            +   +G G FG+V    W     + VA+K  R       +  I     E ++   L KH
Sbjct: 10  TLEEIIGIGGFGKVYRAFW---IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAML-KH 65

Query: 154 D-----KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 207
                 +G   C++         ++C+V E   G  L   L     +  P D++   A Q
Sbjct: 66  PNIIALRGV--CLK-------EPNLCLVMEFARGGPLNRVLSG---KRIPPDILVNWAVQ 113

Query: 208 LLECIAFMHDLC---MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
           +   + ++HD     +IH DLK  N+L+                             +  
Sbjct: 114 IARGMNYLHDEAIVPIIHRDLKSSNILI-------------------LQKVENGDLSNKI 154

Query: 265 IKVIDFGSTTYERPDQNY-IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF 323
           +K+ DFG                  + APEVI    ++   D+WS G +L EL TGE  F
Sbjct: 155 LKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214

Query: 324 QTHENLEHLAMMERVL 339
                ++ LA+   V 
Sbjct: 215 ---RGIDGLAVAYGVA 227

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 97.3 bits (243), Expect = 6e-23
 Identities = 59/364 (16%), Positives = 117/364 (32%), Gaps = 112/364 (30%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMIEIEVLQQLAKHDK 155
           +Y +  ++G+G++G V   ++       A+K++  + + +             + A    
Sbjct: 14  QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73

Query: 156 GGNRCV--QIRN-------------------WFDY-RNHICIVFEKL-GSSLYDFLRKNN 192
              R    Q+                       D   +H+ +VFE +    + +      
Sbjct: 74  IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK- 132

Query: 193 YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD 252
                 D  R   + L++ I ++H   +IH D+KP N+L+                    
Sbjct: 133 --PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV-------------------G 171

Query: 253 SSYFKRMPKSSAIKVIDFG-STTYERPDQNYIVSTR----HYRAPEVILGLGWTY---PC 304
                       IK+ DFG S  ++  D   ++S       + APE +      +     
Sbjct: 172 EDG--------HIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKAL 221

Query: 305 DIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLD 364
           D+W++G  L     G+  F   E +                +  +        ++   L+
Sbjct: 222 DVWAMGVTLYCFVFGQCPFM-DERI--------------MCLHSK--------IKSQALE 258

Query: 365 WPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHP 424
           +P+                         D +  DL  L+  +L  +P  R+   E   HP
Sbjct: 259 FPD-----------------------QPDIAE-DLKDLITRMLDKNPESRIVVPEIKLHP 294

Query: 425 FFTR 428
           + TR
Sbjct: 295 WVTR 298

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 96.5 bits (241), Expect = 7e-23
 Identities = 62/343 (18%), Positives = 118/343 (34%), Gaps = 93/343 (27%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI--EIEVLQQLAKHDK 155
            + +   +GEG +G+V    +R  +E VA+KIV   +       I  EI + + L  H+ 
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHE- 65

Query: 156 GGNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                V+        N   +  E   G  L+D +  +     P    +    QL+  + +
Sbjct: 66  ---NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 120

Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 273
           +H + + H D+KPEN+LL                   D            +K+ DFG +T
Sbjct: 121 LHGIGITHRDIKPENLLL-------------------DERD--------NLKISDFGLAT 153

Query: 274 TYERPDQNYIVSTR----HYRAPEVILGLGWTY---PCDIWSVGCILVELCTGEALFQTH 326
            +   ++  +++       Y APE++      +   P D+WS G +L  +  GE  +   
Sbjct: 154 VFRYNNRERLLNKMCGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPWDQP 211

Query: 327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 386
            +                          + Y       W                     
Sbjct: 212 SD--------------SCQEYSDWKE-KKTY----LNPW--------------------- 231

Query: 387 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
              + +D +      LL  +L  +P+ R+T  +  +  ++ + 
Sbjct: 232 ---KKIDSAP---LALLHKILVENPSARITIPDIKKDRWYNKP 268

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 97.0 bits (242), Expect = 9e-23
 Identities = 81/348 (23%), Positives = 127/348 (36%), Gaps = 91/348 (26%)

Query: 88  MFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI--EIE 145
           M  L  +    +    K+G+G+FG+V +  D   +++VAIKI+   +   E   I  EI 
Sbjct: 13  MQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEIT 72

Query: 146 VLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREI 204
           VL Q            +    +     + I+ E L G S  D L            +  I
Sbjct: 73  VLSQC-DSPY----VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG---PLDETQIATI 124

Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            R++L+ + ++H    IH D+K  NVLL                                
Sbjct: 125 LREILKGLDYLHSEKKIHRDIKAANVLLSE---------------------------HGE 157

Query: 265 IKVIDFG---STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA 321
           +K+ DFG     T  +  +N  V T  + APEVI    +    DIWS+G   +EL  GE 
Sbjct: 158 VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEP 217

Query: 322 -LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK 380
              + H       M  +VL  +P++                                   
Sbjct: 218 PHSELH------PM--KVLFLIPKN----------------------------------N 235

Query: 381 LPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
            P L+       ++S   L   ++  L  +P+ R TA+E L+H F  R
Sbjct: 236 PPTLEG------NYSK-PLKEFVEACLNKEPSFRPTAKELLKHKFILR 276

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 95.1 bits (237), Expect = 3e-22
 Identities = 48/253 (18%), Positives = 82/253 (32%), Gaps = 56/253 (22%)

Query: 100 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI--------EIEVLQQLA 151
           +   ++G+G FG V +    + K +VAIK +       E  MI        E+ ++  L 
Sbjct: 22  EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL- 80

Query: 152 KHD-----KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIA 205
            H       G                  +V E +    LY  L           +   + 
Sbjct: 81  NHPNIVKLYGL--MHN---------PPRMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLM 128

Query: 206 RQLLECIAFMHDL--CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSS 263
             +   I +M +    ++H DL+  N+ L S +                           
Sbjct: 129 LDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLD----------------------ENAPV 166

Query: 264 AIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTY--PCDIWSVGCILVELCTGEA 321
             KV DFG +       + ++    + APE I     +Y    D +S   IL  + TGE 
Sbjct: 167 CAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG 226

Query: 322 LFQTHENLEHLAM 334
            F   +   +  +
Sbjct: 227 PF---DEYSYGKI 236

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 97.6 bits (243), Expect = 4e-22
 Identities = 76/342 (22%), Positives = 124/342 (36%), Gaps = 95/342 (27%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQQLAKH 153
            Y +   +G GTFG+V           VA+KI+  + I+       I  EI+ L+   +H
Sbjct: 17  HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF-RH 75

Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
                  +++       + I +V E + G  L+D++ KN          R + +Q+L  +
Sbjct: 76  P----HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKN--GRLDEKESRRLFQQILSGV 129

Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
            + H   ++H DLKPENVLL         D   +                   K+ DFG 
Sbjct: 130 DYCHRHMVVHRDLKPENVLL---------DAHMN------------------AKIADFGL 162

Query: 273 TTYERPDQNYIVSTR----HYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHE 327
           +      +   + T     +Y APEVI G  +  P  DIWS G IL  L  G   F   +
Sbjct: 163 SNMMSDGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFD-DD 219

Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           ++                + K+        +  G    P                     
Sbjct: 220 HV--------------PTLFKK--------ICDGIFYTP--------------------- 236

Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                 +    +  LL+ +L+ DP  R T ++   H +F +D
Sbjct: 237 -----QYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD 273

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 95.5 bits (238), Expect = 4e-22
 Identities = 49/244 (20%), Positives = 97/244 (39%), Gaps = 54/244 (22%)

Query: 96  TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD- 154
              +++   +G GT+GQV +    +  ++ AIK++       E    EI +L++ + H  
Sbjct: 23  AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRN 82

Query: 155 ---------KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREI 204
                    K     +  + W        +V E     S+ D ++     +   + +  I
Sbjct: 83  IATYYGAFIKKNPPGMDDQLW--------LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYI 134

Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            R++L  ++ +H   +IH D+K +NVLL                            +++ 
Sbjct: 135 CREILRGLSHLHQHKVIHRDIKGQNVLLT---------------------------ENAE 167

Query: 265 IKVIDFG---STTYERPDQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVEL 316
           +K++DFG           +N  + T ++ APEVI         + +  D+WS+G   +E+
Sbjct: 168 VKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM 227

Query: 317 CTGE 320
             G 
Sbjct: 228 AEGA 231

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 95.1 bits (237), Expect = 5e-22
 Identities = 63/343 (18%), Positives = 119/343 (34%), Gaps = 93/343 (27%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI--EIEVLQQLAKHDK 155
            + +   +GEG +G+V    +R  +E VA+KIV   +       I  EI + + L  H+ 
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHE- 65

Query: 156 GGNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
             N  V+        N   +  E   G  L+D +  +     P    +    QL+  + +
Sbjct: 66  --N-VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVY 120

Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-ST 273
           +H + + H D+KPEN+LL                   D            +K+ DFG +T
Sbjct: 121 LHGIGITHRDIKPENLLL-------------------DERD--------NLKISDFGLAT 153

Query: 274 TYERPDQNYIVSTR----HYRAPEVILGLGWTY---PCDIWSVGCILVELCTGEALFQTH 326
            +   ++  +++       Y APE++      +   P D+WS G +L  +  GE  +   
Sbjct: 154 VFRYNNRERLLNKMCGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPWDQP 211

Query: 327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 386
            +                          + Y       W                     
Sbjct: 212 SD--------------SCQEYSDWKE-KKTY----LNPW--------------------- 231

Query: 387 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
              + +D +      LL  +L  +P+ R+T  +  +  ++ + 
Sbjct: 232 ---KKIDSAP---LALLHKILVENPSARITIPDIKKDRWYNKP 268

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 94.7 bits (236), Expect = 6e-22
 Identities = 69/341 (20%), Positives = 123/341 (36%), Gaps = 92/341 (26%)

Query: 96  TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK 155
              + +  K+GEG++G V +   +E  ++VAIK V  ++   +  + EI ++QQ      
Sbjct: 28  EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVP-VESDLQEIIKEISIMQQC----- 81

Query: 156 GGNRCVQIRNWFD---YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
                  +  ++        + IV E     S+ D +R  N ++   D +  I +  L+ 
Sbjct: 82  ---DSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN-KTLTEDEIATILQSTLKG 137

Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           + ++H +  IH D+K  N+LL +                               K+ DFG
Sbjct: 138 LEYLHFMRKIHRDIKAGNILLNT---------------------------EGHAKLADFG 170

Query: 272 ST---TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA-LFQTHE 327
                T     +N ++ T  + APEVI  +G+    DIWS+G   +E+  G+      H 
Sbjct: 171 VAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIH- 229

Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
                 M  R +  +P                                      P  +  
Sbjct: 230 -----PM--RAIFMIPT----------------------------------NPPPTFRK- 247

Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                +  + + T  ++  L   P  R TA + L+HPF   
Sbjct: 248 ----PELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRS 284

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 95.2 bits (237), Expect = 2e-21
 Identities = 72/332 (21%), Positives = 121/332 (36%), Gaps = 87/332 (26%)

Query: 106 GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIE--VLQQLAKHDKGGNRCV 161
           G+G FG+V  C  R   +M A K +    IKK +  AM   E  +L++           V
Sbjct: 193 GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK-VNS----RFVV 247

Query: 162 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
            +   ++ ++ +C+V   + G  L   +       FP       A ++   +  +H   +
Sbjct: 248 SLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERI 307

Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 280
           ++ DLKPEN+LL    +I++ D   +                     +  G T   R   
Sbjct: 308 VYRDLKPENILLDDHGHIRISDLGLA-------------------VHVPEGQTIKGR--- 345

Query: 281 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH-ENLEHLAMMERVL 339
              V T  Y APEV+    +T+  D W++GC+L E+  G++ FQ   + ++   +   V 
Sbjct: 346 ---VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK 402

Query: 340 GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL 399
                                   ++ E   S ++                         
Sbjct: 403 --------------------EVPEEYSER-FSPQAR------------------------ 417

Query: 400 THLLQGLLRYDPTDRL-----TAREALRHPFF 426
             L   LL  DP +RL     +ARE   HP F
Sbjct: 418 -SLCSQLLCKDPAERLGCRGGSAREVKEHPLF 448

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 92.4 bits (230), Expect = 3e-21
 Identities = 57/236 (24%), Positives = 103/236 (43%), Gaps = 46/236 (19%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-EIEVLQQLA 151
            +   +Y    K+G+G  G V    D    + VAI+ +   ++ ++  +I EI V+++  
Sbjct: 16  GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN- 74

Query: 152 KHDKGGNRCVQIRNWFD---YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 207
           K+         I N+ D     + + +V E L G SL D + +       I     + R+
Sbjct: 75  KNP-------NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI---AAVCRE 124

Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
            L+ + F+H   +IH D+K +N+LL                               ++K+
Sbjct: 125 CLQALEFLHSNQVIHRDIKSDNILLGM---------------------------DGSVKL 157

Query: 268 IDFGST---TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 320
            DFG     T E+  ++ +V T ++ APEV+    +    DIWS+G + +E+  GE
Sbjct: 158 TDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 92.4 bits (230), Expect = 4e-21
 Identities = 48/236 (20%), Positives = 97/236 (41%), Gaps = 46/236 (19%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-EIEVLQQLA 151
            +       + K+GEG+ G V    ++     VA+K++   K+ R   +  E+ +++   
Sbjct: 41  GDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY- 99

Query: 152 KHDKGGNRCVQIRNWFD---YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 207
           +H         +   +        + ++ E L G +L D + +       I     +   
Sbjct: 100 QHF-------NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQI---ATVCEA 149

Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           +L+ +A++H   +IH D+K +++LL                                +K+
Sbjct: 150 VLQALAYLHAQGVIHRDIKSDSILLTL---------------------------DGRVKL 182

Query: 268 IDFG---STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 320
            DFG     + + P +  +V T ++ APEVI    +    DIWS+G +++E+  GE
Sbjct: 183 SDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 94.6 bits (235), Expect = 5e-21
 Identities = 66/335 (19%), Positives = 118/335 (35%), Gaps = 93/335 (27%)

Query: 106 GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIE--VLQQLAKHDKGGNRC- 160
           G G FG+V  C   +  +M A+K +    IK  +   +   E  +L  ++  D     C 
Sbjct: 198 GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD-----CP 252

Query: 161 --VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             V +   F   + +  + + + G  L+  L ++    F    +R  A +++  +  MH+
Sbjct: 253 FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHN 310

Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
             +++ DLKP N+LL    ++++ D   +    K                       +  
Sbjct: 311 RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--------------------KPHAS 350

Query: 278 PDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
                 V T  Y APEV+  G+ +    D +S+GC+L +L  G + F+ H+  +   +  
Sbjct: 351 ------VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR 404

Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 396
             L                       ++ P                              
Sbjct: 405 MTL--------------------TMAVELP-----------------------DSFSPEL 421

Query: 397 GDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 426
                LL+GLL+ D   RL      A+E    PFF
Sbjct: 422 RS---LLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 90.5 bits (225), Expect = 2e-20
 Identities = 67/347 (19%), Positives = 122/347 (35%), Gaps = 97/347 (27%)

Query: 96  TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-EIEVLQQLAKHD 154
              ++I  ++G+G FG+V +  ++E   + A K++    +      I EIE+L     H 
Sbjct: 18  NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATC-DHP 76

Query: 155 KGGNRCVQIRNWFD---YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
                   I        +   + I+ E   G ++   + + + R      ++ + RQ+LE
Sbjct: 77  -------YIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLE 128

Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + F+H   +IH DLK  NVL+                                I++ DF
Sbjct: 129 ALNFLHSKRIIHRDLKAGNVLMTL---------------------------EGDIRLADF 161

Query: 271 GST---TYERPDQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGEA- 321
           G +         ++  + T ++ APEV++        + Y  DIWS+G  L+E+   E  
Sbjct: 162 GVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 221

Query: 322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL 381
             + +       M  RVL  + +                                     
Sbjct: 222 HHELN------PM--RVLLKIAKS----------------------------------DP 239

Query: 382 PRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
           P L           + +    L+  L  +P  R +A + L HPF + 
Sbjct: 240 PTLLT-----PSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSS 281

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 90.9 bits (226), Expect = 2e-20
 Identities = 72/348 (20%), Positives = 120/348 (34%), Gaps = 98/348 (28%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIV--RGIKKYREAAMI--EIEVLQ 148
           ++    +    ++G G+FG V    D    E+VAIK +   G +   +   I  E+  LQ
Sbjct: 50  DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 109

Query: 149 QLAKHDKGGNRCVQIRNWFD---YRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIA 205
           +L        R      +       +   +V E    S  D L  +  +      +  + 
Sbjct: 110 KL--------RHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVT 160

Query: 206 RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 265
              L+ +A++H   MIH D+K  N+LL                                +
Sbjct: 161 HGALQGLAYLHSHNMIHRDVKAGNILLSE---------------------------PGLV 193

Query: 266 KVIDFG-STTYERPDQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEA 321
           K+ DFG ++       N  V T ++ APEVIL +    +    D+WS+G   +EL   + 
Sbjct: 194 KLGDFGSASIMAP--ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 251

Query: 322 -LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK 380
            LF  +      AM    L  + Q+                                  +
Sbjct: 252 PLFNMN------AM--SALYHIAQN----------------------------------E 269

Query: 381 LPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
            P LQ+       H +    + +   L+  P DR T+   L+H F  R
Sbjct: 270 SPALQS------GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 311

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 92.2 bits (229), Expect = 3e-20
 Identities = 62/336 (18%), Positives = 113/336 (33%), Gaps = 92/336 (27%)

Query: 106 GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIE--VLQQLAKHDKGGNRCV 161
           G G FG+V  C  +   ++ A K +    +KK +      +E  +L +           V
Sbjct: 194 GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK-VHS----RFIV 248

Query: 162 QIRNWFDYRNHICIVFE-----KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 216
            +   F+ +  +C+V        +   +Y+    N    F          Q++  +  +H
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN--PGFQEPRAIFYTAQIVSGLEHLH 306

Query: 217 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 276
              +I+ DLKPENVLL     +++ D                     A+++    + T  
Sbjct: 307 QRNIIYRDLKPENVLLDDDGNVRISDL------------------GLAVELKAGQTKTKG 348

Query: 277 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH-ENLEHLAMM 335
                    T  + APE++LG  + +  D +++G  L E+      F+   E +E+  + 
Sbjct: 349 Y------AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 402

Query: 336 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 395
           +RVL                       + +P+   S  S                     
Sbjct: 403 QRVL--------------------EQAVTYPDK-FSPASK-------------------- 421

Query: 396 AGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 426
                   + LL+ DP  RL     +      HP F
Sbjct: 422 -----DFCEALLQKDPEKRLGFRDGSCDGLRTHPLF 452

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 89.0 bits (221), Expect = 4e-20
 Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 8/136 (5%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG 157
           RY++  K+G G+FG +    D    E VAIK+     K+ +  + E ++ + +    +GG
Sbjct: 10  RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHI-ESKIYKMM----QGG 64

Query: 158 NRCVQIRNWF-DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 216
                IR W     ++  +V E LG SL D L     R F +  V  +A Q++  I ++H
Sbjct: 65  VGIPTIR-WCGAEGDYNVMVMELLGPSLED-LFNFCSRKFSLKTVLLLADQMISRIEYIH 122

Query: 217 DLCMIHTDLKPENVLL 232
               IH D+KP+N L+
Sbjct: 123 SKNFIHRDVKPDNFLM 138

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 88.6 bits (220), Expect = 1e-19
 Identities = 50/230 (21%), Positives = 95/230 (41%), Gaps = 38/230 (16%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDKG 156
            +   +MG GT GQV +   R+   ++A+K +R  G K+  +  +++++V+ +       
Sbjct: 27  LENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCP-- 84

Query: 157 GNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 216
               VQ    F     + I  E +G+      ++      P  ++ ++   +++ + ++ 
Sbjct: 85  --YIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQ-GPIPERILGKMTVAIVKALYYLK 141

Query: 217 D-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           +   +IH D+KP N+LL     IK+ D+  S           R+    A           
Sbjct: 142 EKHGVIHRDVKPSNILLDERGQIKLCDFGIS----------GRLVDDKA----------- 180

Query: 276 ERPDQNYIVSTRHYRAPEVI-----LGLGWTYPCDIWSVGCILVELCTGE 320
               ++       Y APE I         +    D+WS+G  LVEL TG+
Sbjct: 181 ----KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 88.6 bits (220), Expect = 1e-19
 Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 8/136 (5%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG 157
            +++  K+G G FG++    +    E VAIK+     +      +E    +QL      G
Sbjct: 10  NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAP-QLHLEYRFYKQL----GSG 64

Query: 158 NRCVQIRNWF-DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 216
           +   Q+  +F     +  +V E LG SL D L     R+F +  V  IA QL+  + ++H
Sbjct: 65  DGIPQVY-YFGPCGKYNAMVLELLGPSLED-LFDLCDRTFSLKTVLMIAIQLISRMEYVH 122

Query: 217 DLCMIHTDLKPENVLL 232
              +I+ D+KPEN L+
Sbjct: 123 SKNLIYRDVKPENFLI 138

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 88.5 bits (220), Expect = 1e-19
 Identities = 67/331 (20%), Positives = 119/331 (35%), Gaps = 93/331 (28%)

Query: 106 GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAA--MIEIEVLQQLAKHDKGGNRCV 161
           G G+FG+V+    +E     A+KI+    + K ++    + E  +LQ +          V
Sbjct: 50  GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFP----FLV 104

Query: 162 QIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           ++   F   +++ +V E   G  ++  LR+     F     R  A Q++    ++H L +
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDL 162

Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 280
           I+ DLKPEN+L+    Y                           I+V DFG     +   
Sbjct: 163 IYRDLKPENLLIDQQGY---------------------------IQVTDFGFAKRVKGRT 195

Query: 281 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLG 340
             +  T    APE+IL  G+    D W++G ++ E+  G   F   +    + + E+++ 
Sbjct: 196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQ--PIQIYEKIV- 251

Query: 341 PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT 400
                               G++ +P                        H      D  
Sbjct: 252 -------------------SGKVRFP-----------------------SHFSSDLKD-- 267

Query: 401 HLLQGLLRYDPTDRL-----TAREALRHPFF 426
            LL+ LL+ D T R         +   H +F
Sbjct: 268 -LLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 87.3 bits (217), Expect = 1e-19
 Identities = 62/336 (18%), Positives = 118/336 (35%), Gaps = 86/336 (25%)

Query: 103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI--EIEVLQQLAKHDKGGNRC 160
            ++G G +G V +       +++A+K +R     +E   +  ++++  +           
Sbjct: 13  MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCP----FT 68

Query: 161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRK--NNYRSFPIDLVREIARQLLECIAFMHD- 217
           V           + I  E + +SL  F ++  +  ++ P D++ +IA  +++ +  +H  
Sbjct: 69  VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 128

Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
           L +IH D+KP NVL+ +   +K+ D+  S            +    A             
Sbjct: 129 LSVIHRDVKPSNVLINALGQVKMCDFGIS----------GYLVDDVA-------KDID-- 169

Query: 278 PDQNYIVSTRHYRAPEVILG----LGWTYPCDIWSVGCILVELCTGEALFQTHEN-LEHL 332
                    + Y APE I       G++   DIWS+G  ++EL      + +     + L
Sbjct: 170 ------AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQL 223

Query: 333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 392
             +  V  P P                  +L  P    S E                   
Sbjct: 224 KQV--VEEPSP------------------QL--PADKFSAE------------------- 242

Query: 393 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                         L+ +  +R T  E ++HPFFT 
Sbjct: 243 ------FVDFTSQCLKKNSKERPTYPELMQHPFFTL 272

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 87.0 bits (216), Expect = 3e-19
 Identities = 58/250 (23%), Positives = 96/250 (38%), Gaps = 49/250 (19%)

Query: 100 KIHSKMGEGTFGQVLE-CWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDK 155
            I  K+G G+FG V    W       VA+KI+       +     + E+ ++++L +H  
Sbjct: 40  NIKEKIGAGSFGTVHRAEW---HGSDVAVKILMEQDFHAERVNEFLREVAIMKRL-RHP- 94

Query: 156 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYR-SFPIDLVREIARQLLECIA 213
             N  V          ++ IV E L   SLY  L K+  R          +A  + + + 
Sbjct: 95  --N-IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151

Query: 214 FMH--DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           ++H  +  ++H +LK  N+L+                   D  Y         +KV DFG
Sbjct: 152 YLHNRNPPIVHRNLKSPNLLV-------------------DKKY--------TVKVCDFG 184

Query: 272 STTYERPDQNYIVS---TRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 328
            +  +        S   T  + APEV+         D++S G IL EL T +  +    N
Sbjct: 185 LSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW---GN 241

Query: 329 LEHLAMMERV 338
           L    ++  V
Sbjct: 242 LNPAQVVAAV 251

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 86.6 bits (215), Expect = 3e-19
 Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 8/136 (5%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG 157
            YK+  ++GEG+FG + E  +    + VAIK         +    E    + L     G 
Sbjct: 11  HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRD-EYRTYKLL----AGC 65

Query: 158 NRCVQIRNWF-DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 216
                +  +F     H  +V + LG SL D L     R F +  V   A+Q+L  +  +H
Sbjct: 66  TGIPNVY-YFGQEGLHNVLVIDLLGPSLED-LLDLCGRKFSVKTVAMAAKQMLARVQSIH 123

Query: 217 DLCMIHTDLKPENVLL 232
           +  +++ D+KP+N L+
Sbjct: 124 EKSLVYRDIKPDNFLI 139

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 86.6 bits (215), Expect = 3e-19
 Identities = 72/354 (20%), Positives = 123/354 (34%), Gaps = 97/354 (27%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI--EIEVLQQLAKHD 154
             Y++   +G G    V   +   +KE VAIK +   K       +  EI+ + Q   H 
Sbjct: 15  DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQC-HHP 73

Query: 155 KGGNRCVQIRNWFD---YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLV---REIA-- 205
                   I +++     ++ + +V + L G S+ D ++    +      V     IA  
Sbjct: 74  -------NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 126

Query: 206 -RQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            R++LE + ++H    IH D+K  N+LL                               +
Sbjct: 127 LREVLEGLEYLHKNGQIHRDVKAGNILLGE---------------------------DGS 159

Query: 265 IKVIDFG-----STTYERPDQ---NYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVE 315
           +++ DFG     +T  +          V T  + APEV+    G+ +  DIWS G   +E
Sbjct: 160 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIE 219

Query: 316 LCTGEA-LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRES 374
           L TG A   +         M  +VL    Q+    ++   +      +         +  
Sbjct: 220 LATGAAPYHKYP------PM--KVLMLTLQNDPPSLETGVQDKEMLKKY-------GKS- 263

Query: 375 IKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                                      ++   L+ DP  R TA E LRH FF +
Sbjct: 264 ------------------------FRKMISLCLQKDPEKRPTAAELLRHKFFQK 293

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 88.1 bits (218), Expect = 5e-19
 Identities = 37/136 (27%), Positives = 69/136 (50%), Gaps = 8/136 (5%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG 157
           ++++  K+G G+FG++    + +  E VAIK+     K+ +    E ++ + L    +GG
Sbjct: 8   KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLY-ESKIYRIL----QGG 62

Query: 158 NRCVQIRNWF-DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 216
                +R WF    ++  +V + LG SL D L     R   +  V  +A Q++  + F+H
Sbjct: 63  TGIPNVR-WFGVEGDYNVLVMDLLGPSLED-LFNFCSRKLSLKTVLMLADQMINRVEFVH 120

Query: 217 DLCMIHTDLKPENVLL 232
               +H D+KP+N L+
Sbjct: 121 SKSFLHRDIKPDNFLM 136

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 85.4 bits (212), Expect = 8e-19
 Identities = 52/250 (20%), Positives = 94/250 (37%), Gaps = 63/250 (25%)

Query: 100 KIHSKMGEGTFGQVLE-CWDRERKEMVAIKIVRGIKKYREAAMI----EIEVLQQLAKHD 154
            +  ++G G+FG V +  W  +    VA+K++  +       +     E+ VL++  +H 
Sbjct: 27  TVGQRIGSGSFGTVYKGKWHGD----VAVKMLN-VTAPTPQQLQAFKNEVGVLRKT-RHV 80

Query: 155 K-----GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL 208
                 G                + IV +   GSSLY  L  +    F +  + +IARQ 
Sbjct: 81  NILLFMGY--STA--------PQLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQT 129

Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
              + ++H   +IH DLK  N + +  +                            +K+ 
Sbjct: 130 ARGMDYLHAKSIIHRDLKSNN-IFLHEDNT--------------------------VKIG 162

Query: 269 DFG-----STTYERPDQNYIVSTRHYRAPEVILGLGW---TYPCDIWSVGCILVELCTGE 320
           DFG     S          +  +  + APEVI        ++  D+++ G +L EL TG+
Sbjct: 163 DFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222

Query: 321 ALFQTHENLE 330
             +    N +
Sbjct: 223 LPYSNINNRD 232

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 85.1 bits (211), Expect = 2e-18
 Identities = 65/343 (18%), Positives = 115/343 (33%), Gaps = 88/343 (25%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI--EIEVLQQLAKHDKG 156
            K   ++G G +G V +   +   +++A+K +R     +E   +  +++V+ + +     
Sbjct: 24  LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCP-- 81

Query: 157 GNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRK---NNYRSFPIDLVREIARQLLECIA 213
               VQ            I  E + +S   F +          P +++ +I    ++ + 
Sbjct: 82  --YIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALN 139

Query: 214 FMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
            + + L +IH D+KP N+LL                             S  IK+ DFG 
Sbjct: 140 HLKENLKIIHRDIKPSNILLDR---------------------------SGNIKLCDFGI 172

Query: 273 TTY--ERPDQNYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEA-LFQT 325
           +    +   +      R Y APE I       G+    D+WS+G  L EL TG     + 
Sbjct: 173 SGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKW 232

Query: 326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 385
           +   + L  +  V G  PQ  L                +  E   S              
Sbjct: 233 NSVFDQLTQV--VKGDPPQ--LS---------------NSEEREFSPS------------ 261

Query: 386 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                          + +   L  D + R   +E L+HPF   
Sbjct: 262 -------------FINFVNLCLTKDESKRPKYKELLKHPFILM 291

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 85.5 bits (212), Expect = 2e-18
 Identities = 72/346 (20%), Positives = 119/346 (34%), Gaps = 92/346 (26%)

Query: 106 GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAA--MIEIEVLQQLAKHDKGGNRCV 161
           G G F +V     ++  ++ A+KI+    + K  E +    E +VL              
Sbjct: 70  GRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVN-GDRR----WIT 124

Query: 162 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           Q+   F   N++ +V E   G  L   L K   R  P ++ R    +++  I  +H L  
Sbjct: 125 QLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGER-IPAEMARFYLAEIVMAIDSVHRLGY 183

Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 280
           +H D+KP+N+LL    +I++ D+ S L                  K+   G+        
Sbjct: 184 VHRDIKPDNILLDRCGHIRLADFGSCL------------------KLRADGTVR-----S 220

Query: 281 NYIVSTRHYRAPEVILGLGWTY-------PCDIWSVGCILVELCTGEALFQTHENLEHLA 333
              V T  Y +PE++  +G           CD W++G    E+  G+  F   ++     
Sbjct: 221 LVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF-YADSTA--E 277

Query: 334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 393
              +++                    +  L  P                       + V 
Sbjct: 278 TYGKIVH------------------YKEHLSLPLVD--------------------EGVP 299

Query: 394 HSAGDLTHLLQGLLRYDPTDRLT---AREALRHPFFTR---DHLRR 433
             A D    +Q LL   P  RL    A +   HPFF     D LR 
Sbjct: 300 EEARD---FIQRLLC-PPETRLGRGGAGDFRTHPFFFGLDWDGLRD 341

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 84.4 bits (209), Expect = 3e-18
 Identities = 31/152 (20%), Positives = 63/152 (41%), Gaps = 22/152 (14%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG 157
           ++ +  K+G G FG +   +   + E  A  +V+   +       E++  Q++AK D   
Sbjct: 38  QWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIK 97

Query: 158 NRCVQIRN---------WF--------DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDL 200
               + +                     YR    +V E+LG  L     +N   +F    
Sbjct: 98  KWIERKQLDYLGIPLFYGSGLTEFKGRSYR---FMVMERLGIDLQKISGQN--GTFKKST 152

Query: 201 VREIARQLLECIAFMHDLCMIHTDLKPENVLL 232
           V ++  ++L+ + ++H+   +H D+K  N+LL
Sbjct: 153 VLQLGIRMLDVLEYIHENEYVHGDIKAANLLL 184

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 84.2 bits (209), Expect = 4e-18
 Identities = 65/333 (19%), Positives = 116/333 (34%), Gaps = 97/333 (29%)

Query: 106 GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAA--MIEIEVLQQLAKHDKGGNRCV 161
           G+G+FG+V     ++  +  AIK ++   +    +    M+E  VL    +H        
Sbjct: 26  GKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP----FLT 81

Query: 162 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
            +   F  + ++  V E L G  L       +   F +      A +++  + F+H   +
Sbjct: 82  HMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGI 139

Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE---R 277
           ++ DLK +N+LL    +IK+ D+               M K +    +   + T      
Sbjct: 140 VYRDLKLDNILLDKDGHIKIADFG--------------MCKEN----MLGDAKTNTFCGT 181

Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 337
           PD         Y APE++LG  + +  D WS G +L E+  G++ F   +  E   +   
Sbjct: 182 PD---------YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE---LFHS 229

Query: 338 VLG---PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           +       P+ +                         +E+                    
Sbjct: 230 IRMDNPFYPRWL------------------------EKEAK------------------- 246

Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALR-HPFF 426
                  LL  L   +P  RL  R  +R HP F
Sbjct: 247 ------DLLVKLFVREPEKRLGVRGDIRQHPLF 273

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 85.5 bits (211), Expect = 5e-18
 Identities = 69/335 (20%), Positives = 117/335 (34%), Gaps = 95/335 (28%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREAAMIEIEVLQQLAKHDKGGNRC 160
           +G+G+FG+V+    +   E+ A+KI++          E  M+E  VL    K        
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP----FL 404

Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
            Q+ + F   + +  V E + G  L           F        A ++   + F+    
Sbjct: 405 TQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG 462

Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD 279
           +I+ DLK +NV+L S  +IK+ D+               M K +    I  G TT     
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFG--------------MCKEN----IWDGVTT----- 499

Query: 280 QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 339
                 T  Y APE+I    +    D W+ G +L E+  G+A F+  +  E   + + ++
Sbjct: 500 -KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE---LFQSIM 555

Query: 340 G---PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 396
                 P+ M                        S+E++                     
Sbjct: 556 EHNVAYPKSM------------------------SKEAV--------------------- 570

Query: 397 GDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 426
                + +GL+   P  RL       R+   H FF
Sbjct: 571 ----AICKGLMTKHPGKRLGCGPEGERDIKEHAFF 601

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 85.3 bits (211), Expect = 6e-18
 Identities = 53/256 (20%), Positives = 98/256 (38%), Gaps = 59/256 (23%)

Query: 92  GENLTSRYKIHSKMGEGTFGQVLECWDR---ERKEMVAIKIVR--GIKKYREAAMIEIEV 146
           G+ +  +Y++   +  G  G +    DR    R   V +K +   G  + +  AM E + 
Sbjct: 75  GDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRP--VVLKGLVHSGDAEAQAMAMAERQF 132

Query: 147 LQQLAKHDKGGNRCVQIRNWFDYRNHIC-----IVFEKL-GSSLYDFLRKNNYRSFPIDL 200
           L ++  H       VQI N+ ++ +        IV E + G SL         +  P+  
Sbjct: 133 LAEV-VHP----SIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKG----QKLPVAE 183

Query: 201 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 260
                 ++L  ++++H + +++ DLKPEN++L   +                        
Sbjct: 184 AIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQ------------------------ 219

Query: 261 KSSAIKVIDFG---STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 317
               +K+ID G             Y+  T  ++APE++   G T   DI++VG  L  L 
Sbjct: 220 ----LKLIDLGAVSRIN----SFGYLYGTPGFQAPEIVRT-GPTVATDIYTVGRTLAALT 270

Query: 318 TGEALFQTHENLEHLA 333
                      ++ L 
Sbjct: 271 LDLPTR-NGRYVDGLP 285

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 83.4 bits (207), Expect = 6e-18
 Identities = 64/332 (19%), Positives = 125/332 (37%), Gaps = 81/332 (24%)

Query: 106 GEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREAAMIEIEVLQQLAKHDKGGNRCV 161
           G G++ +VL    ++   + A+K+V+       +  +    E  V +Q + H       V
Sbjct: 18  GRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH----PFLV 73

Query: 162 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
            + + F   + +  V E + G  L         R  P +  R  + ++   + ++H+  +
Sbjct: 74  GLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALNYLHERGI 131

Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 280
           I+ DLK +NVLL S  +IK+ DY               M K      +  G TT      
Sbjct: 132 IYRDLKLDNVLLDSEGHIKLTDYG--------------MCKEG----LRPGDTT------ 167

Query: 281 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLG 340
           +    T +Y APE++ G  + +  D W++G ++ E+  G + F    + ++         
Sbjct: 168 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE--- 224

Query: 341 PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT 400
               ++ + +                        ++  +++PR        +   A    
Sbjct: 225 ---DYLFQVI------------------------LEKQIRIPR-------SLSVKAAS-- 248

Query: 401 HLLQGLLRYDPTDRL------TAREALRHPFF 426
            +L+  L  DP +RL         +   HPFF
Sbjct: 249 -VLKSFLNKDPKERLGCHPQTGFADIQGHPFF 279

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 83.2 bits (206), Expect = 6e-18
 Identities = 52/260 (20%), Positives = 93/260 (35%), Gaps = 60/260 (23%)

Query: 100 KIHSKMGEGTFGQVLE-CWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDK 155
           +I   +G+G FGQV    W  E    VAI+++      +   +A   E+   +Q  +H+ 
Sbjct: 36  EIGELIGKGRFGQVYHGRWHGE----VAIRLIDIERDNEDQLKAFKREVMAYRQT-RHEN 90

Query: 156 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                V          H+ I+     G +LY  +R        ++  R+IA+++++ + +
Sbjct: 91  ----VVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGY 145

Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H   ++H DLK +NV           D                      + + DFG  +
Sbjct: 146 LHAKGILHKDLKSKNVFY---------DNGK-------------------VVITDFGLFS 177

Query: 275 YERPDQNYIVS--------TRHYRAPEVILGLGWTYP---------CDIWSVGCILVELC 317
                Q                + APE+I  L               D++++G I  EL 
Sbjct: 178 ISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELH 237

Query: 318 TGEALFQTHENLEHLAMMER 337
             E  F+T      +  M  
Sbjct: 238 AREWPFKTQPAEAIIWQMGT 257

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 83.6 bits (207), Expect = 7e-18
 Identities = 29/157 (18%), Positives = 59/157 (37%), Gaps = 29/157 (18%)

Query: 98  RYKIHSKMGEGTFGQV--------LECWDRERKEMVAIKI-------VRGIKKY-REAAM 141
           ++K+ S       G +        L C    +K+  ++K+             + R A  
Sbjct: 43  QWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKP 102

Query: 142 IEIEVLQQLAKHDKGG-NRCVQIRNWF-----DYRNHICIVFEKLGSSLYDFLRKNNYRS 195
           +++   ++L          C+     F      YR    +V   LG SL   L  +    
Sbjct: 103 LQVNKWKKLYSTPLLAIPTCM----GFGVHQDKYR---FLVLPSLGRSLQSALDVSPKHV 155

Query: 196 FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLL 232
                V ++A +LL+ + F+H+   +H ++  EN+ +
Sbjct: 156 LSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFV 192

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 83.0 bits (206), Expect = 7e-18
 Identities = 69/340 (20%), Positives = 115/340 (33%), Gaps = 111/340 (32%)

Query: 106 GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAA--MIEIEVLQQLAKHDKGGNRCV 161
           G G+FG+V     R      A+K+++   + + ++      E  +L  +  H       +
Sbjct: 15  GTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THP----FII 69

Query: 162 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           ++   F     I ++ + + G  L+  LRK   + FP  + +  A ++   + ++H   +
Sbjct: 70  RMWGTFQDAQQIFMIMDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSKDI 127

Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG------STT 274
           I+ DLKPEN+LL         D     H                IK+ DFG        T
Sbjct: 128 IYRDLKPENILL---------DKNG--H----------------IKITDFGFAKYVPDVT 160

Query: 275 YER---PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 331
           Y     PD         Y APEV+    +    D WS G ++ E+  G   F    N   
Sbjct: 161 YTLCGTPD---------YIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF-YDSN--T 208

Query: 332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH 391
           +   E++L                       L +P                         
Sbjct: 209 MKTYEKIL--------------------NAELRFP-----------------------PF 225

Query: 392 VDHSAGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 426
            +    D   LL  L+  D + RL        +   HP+F
Sbjct: 226 FNEDVKD---LLSRLITRDLSQRLGNLQNGTEDVKNHPWF 262

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 81.5 bits (202), Expect = 1e-17
 Identities = 37/255 (14%), Positives = 77/255 (30%), Gaps = 60/255 (23%)

Query: 100 KIHSKMGEGTFGQVLE-CWDRERKEMVAIKIVRGIKKYREAAMI----EIEVLQQLAKHD 154
              +K+ E   G++ +  W   +   + +K+++ ++ +          E   L+    H 
Sbjct: 13  NFLTKLNENHSGELWKGRW---QGNDIVVKVLK-VRDWSTRKSRDFNEECPRLRIF-SHP 67

Query: 155 -----KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL 208
                 G   C           H  ++   +   SLY+ L +            + A  +
Sbjct: 68  NVLPVLGA--CQS-----PPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDM 120

Query: 209 LECIAFMHDL--CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
              +AF+H L   +    L   +V++                   D             +
Sbjct: 121 ARGMAFLHTLEPLIPRHALNSRSVMI-------------------DEDM--------TAR 153

Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYP---CDIWSVGCILVELCTGEALF 323
           +                +    + APE +            D+WS   +L EL T E  F
Sbjct: 154 ISMADVKFSF--QSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPF 211

Query: 324 QTHENLEHLAMMERV 338
               +L ++ +  +V
Sbjct: 212 ---ADLSNMEIGMKV 223

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 83.2 bits (206), Expect = 1e-17
 Identities = 63/332 (18%), Positives = 125/332 (37%), Gaps = 81/332 (24%)

Query: 106 GEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREAAMIEIEVLQQLAKHDKGGNRCV 161
           G G++ +VL    ++   + A+++V+       +  +    E  V +Q + H       V
Sbjct: 61  GRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNH----PFLV 116

Query: 162 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
            + + F   + +  V E + G  L         R  P +  R  + ++   + ++H+  +
Sbjct: 117 GLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAEISLALNYLHERGI 174

Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 280
           I+ DLK +NVLL S  +IK+ DY               M K      +  G TT      
Sbjct: 175 IYRDLKLDNVLLDSEGHIKLTDYG--------------MCKEG----LRPGDTT------ 210

Query: 281 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLG 340
           +    T +Y APE++ G  + +  D W++G ++ E+  G + F    + ++         
Sbjct: 211 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE--- 267

Query: 341 PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT 400
               ++ + +                        ++  +++PR        +   A    
Sbjct: 268 ---DYLFQVI------------------------LEKQIRIPR-------SLSVKAAS-- 291

Query: 401 HLLQGLLRYDPTDRL------TAREALRHPFF 426
            +L+  L  DP +RL         +   HPFF
Sbjct: 292 -VLKSFLNKDPKERLGCHPQTGFADIQGHPFF 322

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 81.6 bits (202), Expect = 2e-17
 Identities = 43/231 (18%), Positives = 91/231 (39%), Gaps = 34/231 (14%)

Query: 100 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMI-EIEVLQQLAKHDK--- 155
                +G+G FGQ ++   RE  E++ +K +    +  +   + E++V++ L +H     
Sbjct: 13  IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL-EHPNVLK 71

Query: 156 --GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
             G     +          +  + E + G +L   ++  +   +P       A+ +   +
Sbjct: 72  FIGV--LYK-------DKRLNFITEYIKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGM 121

Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF---KRMPKSSAIKVID 269
           A++H + +IH DL   N L+  ++ + V D             F   + M          
Sbjct: 122 AYLHSMNIIHRDLNSHNCLVRENKNVVVAD-------------FGLARLMVDEKTQPEGL 168

Query: 270 FGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 320
                 +R  +  +V   ++ APE+I G  +    D++S G +L E+    
Sbjct: 169 RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRV 219

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 81.5 bits (202), Expect = 3e-17
 Identities = 69/337 (20%), Positives = 119/337 (35%), Gaps = 101/337 (29%)

Query: 106 GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAA--MIEIEVLQQLAKHDKGGNRCV 161
           G+G+FG+V+    +   E+ A+KI++   + +  +    M+E  VL    K         
Sbjct: 29  GKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP----FLT 84

Query: 162 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           Q+ + F   + +  V E + G  L           F        A ++   + F+    +
Sbjct: 85  QLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGI 142

Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE---R 277
           I+ DLK +NV+L S  +IK+ D+               M K +    I  G TT      
Sbjct: 143 IYRDLKLDNVMLDSEGHIKIADFG--------------MCKEN----IWDGVTTKTFCGT 184

Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMER 337
           PD         Y APE+I    +    D W+ G +L E+  G+A F   E+ +   + + 
Sbjct: 185 PD---------YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF-EGEDEDE--LFQS 232

Query: 338 VLG---PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           ++      P+ M                        S+E++                   
Sbjct: 233 IMEHNVAYPKSM------------------------SKEAV------------------- 249

Query: 395 SAGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 426
                  + +GL+   P  RL       R+   H FF
Sbjct: 250 ------AICKGLMTKHPGKRLGCGPEGERDIKEHAFF 280

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 80.8 bits (200), Expect = 7e-17
 Identities = 55/333 (16%), Positives = 113/333 (33%), Gaps = 93/333 (27%)

Query: 106 GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAA--MIEIEVLQQLAKHDKGGNRC- 160
           G+G+FG+V      + K+M A+K +      +  E      E++++Q L           
Sbjct: 24  GKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL--------EHP 75

Query: 161 --VQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
             V +   F     + +V +  LG  L   L++N    F  + V+    +L+  + ++ +
Sbjct: 76  FLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQN--VHFKEETVKLFICELVMALDYLQN 133

Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
             +IH D+KP+N+LL    ++ + D+  +                    ++   +     
Sbjct: 134 QRIIHRDMKPDNILLDEHGHVHITDFNIA-------------------AMLPRETQITT- 173

Query: 278 PDQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                +  T+ Y APE+     G G+++  D WS+G    EL  G   +    +     +
Sbjct: 174 -----MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEI 228

Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
           +                           + +P   +                        
Sbjct: 229 VHTFE--------------------TTVVTYPSAWSQ----------------------- 245

Query: 395 SAGDLTHLLQGLLRYDPTDRL-TAREALRHPFF 426
              ++  LL+ LL  +P  R     +    P+ 
Sbjct: 246 ---EMVSLLKKLLEPNPDQRFSQLSDVQNFPYM 275

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 80.9 bits (200), Expect = 8e-17
 Identities = 66/333 (19%), Positives = 119/333 (35%), Gaps = 89/333 (26%)

Query: 106 GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAA--MIEIEVLQQLAKHDKGGNRCV 161
           G G FG+V     +  +++ A+K++    + K  ++A    E +++   A         V
Sbjct: 78  GRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF-ANSP----WVV 132

Query: 162 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           Q+   F    ++ +V E + G  L + +        P    R    +++  +  +H +  
Sbjct: 133 QLFYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMGF 189

Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 280
           IH D+KP+N+LL  S ++K+ D+ +            +M K   ++      T    PD 
Sbjct: 190 IHRDVKPDNMLLDKSGHLKLADFGTC----------MKMNKEGMVRCDTAVGT----PD- 234

Query: 281 NYIVSTRHYRAPEVILGLGWTYP----CDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
                   Y +PEV+   G        CD WSVG  L E+  G+  F   ++L       
Sbjct: 235 --------YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF-YADSLV--GTYS 283

Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 396
           +++                    +  L +P+     +  K+                   
Sbjct: 284 KIMN------------------HKNSLTFPDDNDISKEAKN------------------- 306

Query: 397 GDLTHLLQGLLRYDPTDRLT---AREALRHPFF 426
                L+   L  D   RL      E  RH FF
Sbjct: 307 -----LICAFLT-DREVRLGRNGVEEIKRHLFF 333

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 80.0 bits (198), Expect = 8e-17
 Identities = 77/336 (22%), Positives = 122/336 (36%), Gaps = 100/336 (29%)

Query: 106 GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAA--MIEIEVLQQLAKHDKGGNRC- 160
           G+GTFG+V+   ++      A+KI+R   I    E A  + E  VLQ          R  
Sbjct: 14  GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT--------RHP 65

Query: 161 --VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
               ++  F   + +C V E   G  L  F   +  R F  +  R    +++  + ++H 
Sbjct: 66  FLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYLHS 123

Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
             +++ D+K EN++L    +IK+ D+               + K      I  G+T    
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDF--------------GLCKEG----ISDGATM--- 162

Query: 278 PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMM 335
                   T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +M
Sbjct: 163 ---KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219

Query: 336 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 395
           E +    P+ +                        S E+                     
Sbjct: 220 EEI--RFPRTL------------------------SPEAK-------------------- 233

Query: 396 AGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 426
                 LL GLL+ DP  RL      A+E + H FF
Sbjct: 234 -----SLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 81.0 bits (200), Expect = 9e-17
 Identities = 66/344 (19%), Positives = 124/344 (36%), Gaps = 90/344 (26%)

Query: 106 GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAA--MIEIEVLQQLAKHDKGGNRCV 161
           G G FG+V     +   ++ A+KI+    + K  E A    E +VL              
Sbjct: 83  GRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN-GDSK----WIT 137

Query: 162 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
            +   F   N++ +V +   G  L   L K   R  P ++ R    +++  I  +H L  
Sbjct: 138 TLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR-LPEEMARFYLAEMVIAIDSVHQLHY 196

Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 280
           +H D+KP+N+L+  + +I++ D+ S            ++ +   ++      T    PD 
Sbjct: 197 VHRDIKPDNILMDMNGHIRLADFGSC----------LKLMEDGTVQSSVAVGT----PD- 241

Query: 281 NYIVSTRHYRAPEVILGL-----GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 335
                   Y +PE++  +      +   CD WS+G  + E+  GE  F   E+L      
Sbjct: 242 --------YISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF-YAESLV--ETY 290

Query: 336 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 395
            +++                    + R  +P                         V   
Sbjct: 291 GKIMN------------------HKERFQFP-----------------------TQVTDV 309

Query: 396 AGDLTHLLQGLLRYDPTDRLT---AREALRHPFFTR---DHLRR 433
           + +   L++ L+      RL      +  +HPFF+    D++R 
Sbjct: 310 SENAKDLIRRLIC-SREHRLGQNGIEDFKKHPFFSGIDWDNIRN 352

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 80.0 bits (198), Expect = 1e-16
 Identities = 69/335 (20%), Positives = 117/335 (34%), Gaps = 96/335 (28%)

Query: 106 GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAA--MIEIEVLQQLAKHDKGGNRCV 161
           G+G+FG+V+    +E  ++ A+K+++   I +  +    M E  +L     H        
Sbjct: 32  GKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHP----FLT 87

Query: 162 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
           Q+   F   + +  V E + G  L         R F     R  A +++  + F+HD  +
Sbjct: 88  QLFCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDEARARFYAAEIISALMFLHDKGI 145

Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 280
           I+ DLK +NVLL    + K+ D+               M K      I  G TT      
Sbjct: 146 IYRDLKLDNVLLDHEGHCKLADFG--------------MCKEG----ICNGVTT------ 181

Query: 281 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLG 340
                T  Y APE++  + +    D W++G +L E+  G A F+     +   + E +L 
Sbjct: 182 ATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD---LFEAILN 238

Query: 341 ---PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 397
                P  +                          ++                       
Sbjct: 239 DEVVYPTWL------------------------HEDAT---------------------- 252

Query: 398 DLTHLLQGLLRYDPTDRL------TAREALRHPFF 426
               +L+  +  +PT RL           LRHPFF
Sbjct: 253 ---GILKSFMTKNPTMRLGSLTQGGEHAILRHPFF 284

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 79.8 bits (197), Expect = 1e-16
 Identities = 35/188 (18%), Positives = 71/188 (37%), Gaps = 32/188 (17%)

Query: 72  RNGSPPWREDDKDGHYM---FALGENLT----SRYKIHSKMGEGTFGQVLECWDRERKEM 124
           R  +           ++   FA+GE +T    + +K+   +G+G FG +    D    E 
Sbjct: 3   RVKAAQAGRQSSAKRHLAEQFAVGEIITDMAAAAWKVGLPIGQGGFGCIYLA-DMNSSES 61

Query: 125 VAIKIVRGIKKYREAA---MIEIEVLQQLAKHDKGGNRCVQIRN---------WF----- 167
           V       +K           E++  Q+ AK ++        +                 
Sbjct: 62  VGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDK 121

Query: 168 ---DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTD 224
               YR    ++ ++ GS L      N  + F    V +++ ++L+ + ++H+   +H D
Sbjct: 122 NGKSYR---FMIMDRFGSDLQKIYEANA-KRFSRKTVLQLSLRILDILEYIHEHEYVHGD 177

Query: 225 LKPENVLL 232
           +K  N+LL
Sbjct: 178 IKASNLLL 185

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 79.6 bits (197), Expect = 2e-16
 Identities = 77/333 (23%), Positives = 122/333 (36%), Gaps = 94/333 (28%)

Query: 106 GEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAA--MIEIEVLQQLAKHDKGGNRCV 161
           G+G+FG+VL    +  +   A+K+++   I K +E    M E  VL +  KH       V
Sbjct: 47  GKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP----FLV 102

Query: 162 QIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCM 220
            +   F   + +  V + + G  L  F      R F     R  A ++   + ++H L +
Sbjct: 103 GLHFSFQTADKLYFVLDYINGGEL--FYHLQRERCFLEPRARFYAAEIASALGYLHSLNI 160

Query: 221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ 280
           ++ DLKPEN+LL S  +I + D+               + K +    I+  STT      
Sbjct: 161 VYRDLKPENILLDSQGHIVLTDFG--------------LCKEN----IEHNSTTST---- 198

Query: 281 NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL- 339
                T  Y APEV+    +    D W +G +L E+  G   F +    E   M + +L 
Sbjct: 199 --FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE---MYDNILN 253

Query: 340 GPL--PQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 397
            PL    ++                        +  +                       
Sbjct: 254 KPLQLKPNI------------------------TNSAR---------------------- 267

Query: 398 DLTHLLQGLLRYDPTDRL----TAREALRHPFF 426
              HLL+GLL+ D T RL       E   H FF
Sbjct: 268 ---HLLEGLLQKDRTKRLGAKDDFMEIKSHVFF 297

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 79.8 bits (197), Expect = 2e-16
 Identities = 77/335 (22%), Positives = 126/335 (37%), Gaps = 95/335 (28%)

Query: 105 MGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAA--MIEIEVLQQLAKHDKGGNRC 160
           +G+GTFG+V+   ++      A+KI++   I    E A  + E  VLQ  ++H       
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHP----FL 210

Query: 161 VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH-DL 218
             ++  F   + +C V E   G  L  F   +  R F  D  R    +++  + ++H + 
Sbjct: 211 TALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 268

Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
            +++ DLK EN++L    +IK+ D+               + K      I  G+T     
Sbjct: 269 NVVYRDLKLENLMLDKDGHIKITDF--------------GLCKEG----IKDGATM---- 306

Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF--QTHENLEHLAMME 336
                  T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME
Sbjct: 307 --KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME 364

Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 396
            +    P+ +                          E+                      
Sbjct: 365 EI--RFPRTL------------------------GPEAK--------------------- 377

Query: 397 GDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 426
                LL GLL+ DP  RL      A+E ++H FF
Sbjct: 378 ----SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 408

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 78.2 bits (193), Expect = 3e-16
 Identities = 65/360 (18%), Positives = 112/360 (31%), Gaps = 104/360 (28%)

Query: 96  TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD- 154
           +   ++      G FG V +       E VA+KI     K       E+  L  + KH+ 
Sbjct: 23  SMPLQLLEVKARGRFGCVWKAQLLN--EYVAVKIFPIQDKQSWQNEYEVYSLPGM-KHEN 79

Query: 155 ---------KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREI 204
                    +G +  V +           ++       SL DFL+ N       + +  I
Sbjct: 80  ILQFIGAEKRGTSVDVDL----------WLITAFHEKGSLSDFLKAN---VVSWNELCHI 126

Query: 205 ARQLLECIAFMHD----------LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS 254
           A  +   +A++H+            + H D+K +NVLL                    ++
Sbjct: 127 AETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL-------------------KNN 167

Query: 255 YFKRMPKSSAIKVIDFG-----STTYERPDQNYIVSTRHYRAPEVI-----LGLGWTYPC 304
                       + DFG            D +  V TR Y APEV+              
Sbjct: 168 LT--------ACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRI 219

Query: 305 DIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLP--QHMLKRVDRHAEKYVRRGR 362
           D++++G +L EL +           E++   E  +G  P  + M + V        ++ R
Sbjct: 220 DMYAMGLVLWELASRCTAA-DGPVDEYMLPFEEEIGQHPSLEDMQEVVVH------KKKR 272

Query: 363 LDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 422
                     +  +    +  L   I +  DH               D   RL+A     
Sbjct: 273 PVLR------DYWQKHAGMAMLCETIEECWDH---------------DAEARLSAGCVGE 311

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 76.2 bits (188), Expect = 1e-15
 Identities = 66/285 (23%), Positives = 117/285 (41%), Gaps = 57/285 (20%)

Query: 100 KIHSKMGEGTFGQVLEC-WDRE---RKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 154
           K   ++G+G FG V  C +D       E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 13  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 71

Query: 155 KGGNRCVQIRN--WFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
                 V+ +   +   R ++ ++ E    GS L D+L+K+  R   I L+ +   Q+ +
Sbjct: 72  N----IVKYKGVCYSAGRRNLKLIMEYLPYGS-LRDYLQKHKERIDHIKLL-QYTSQICK 125

Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++     IH DL   N+ LV +E                            +K+ DF
Sbjct: 126 GMEYLGTKRYIHRDLATRNI-LVENENR--------------------------VKIGDF 158

Query: 271 GSTTYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
           G T     D+ +              APE +    ++   D+WS G +L EL T      
Sbjct: 159 GLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE--- 215

Query: 325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG-RLDWPEG 368
             ++    A   R++G   Q  +     H  + ++   RL  P+G
Sbjct: 216 --KSKSPPAEFMRMIGNDKQGQMI--VFHLIELLKNNGRLPRPDG 256

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 76.8 bits (190), Expect = 1e-15
 Identities = 66/341 (19%), Positives = 127/341 (37%), Gaps = 106/341 (31%)

Query: 106 GEGTFGQVL---ECWDRERKEMVAIKIVRG---IKKYREAA--MIEIEVLQQLAKHDKGG 157
           G+G +G+V    +       ++ A+K+++    ++  ++ A    E  +L+++       
Sbjct: 26  GKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV------- 78

Query: 158 NRC---VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
            +    V +   F     + ++ E L G  L  F++      F  D       ++   + 
Sbjct: 79  -KHPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALG 135

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
            +H   +I+ DLKPEN++L    ++K+ D+       K+S              I  G+ 
Sbjct: 136 HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLC----KES--------------IHDGTV 177

Query: 274 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 333
           T+          T  Y APE+++  G     D WS+G ++ ++ TG   F T EN +   
Sbjct: 178 THT------FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF-TGENRK--K 228

Query: 334 MMERVLG---PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
            ++++L     LP ++                        ++E+                
Sbjct: 229 TIDKILKCKLNLPPYL------------------------TQEAR--------------- 249

Query: 391 HVDHSAGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 426
                      LL+ LL+ +   RL      A E   HPFF
Sbjct: 250 ----------DLLKKLLKRNAASRLGAGPGDAGEVQAHPFF 280

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 76.3 bits (188), Expect = 1e-15
 Identities = 67/285 (23%), Positives = 117/285 (41%), Gaps = 57/285 (20%)

Query: 100 KIHSKMGEGTFGQVLEC-WDRE---RKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHD 154
           K   ++G+G FG V  C +D       E+VA+K ++   +++      EIE+L+ L +HD
Sbjct: 44  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 102

Query: 155 KGGNRCVQIRN--WFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
                 V+ +   +   R ++ ++ E    GS L D+L+K+  R   I L+ +   Q+ +
Sbjct: 103 N----IVKYKGVCYSAGRRNLKLIMEYLPYGS-LRDYLQKHKERIDHIKLL-QYTSQICK 156

Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++     IH DL   N+ LV +E                            +K+ DF
Sbjct: 157 GMEYLGTKRYIHRDLATRNI-LVENENR--------------------------VKIGDF 189

Query: 271 GSTTYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
           G T     D+ Y              APE +    ++   D+WS G +L EL T      
Sbjct: 190 GLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE--- 246

Query: 325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG-RLDWPEG 368
             ++    A   R++G   Q  +     H  + ++   RL  P+G
Sbjct: 247 --KSKSPPAEFMRMIGNDKQGQMI--VFHLIELLKNNGRLPRPDG 287

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 76.1 bits (188), Expect = 1e-15
 Identities = 54/247 (21%), Positives = 97/247 (39%), Gaps = 61/247 (24%)

Query: 92  GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--------IKKY-REAAMI 142
           G+ +  RYKI  K+G G    V    D      VAIK +          +K++ RE    
Sbjct: 6   GKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREV--- 62

Query: 143 EIEVLQQLAK--HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPID 199
                   ++  H       V + +  +  +   +V E + G +L +++  +      +D
Sbjct: 63  -----HNSSQLSH----QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH--GPLSVD 111

Query: 200 LVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM 259
                  Q+L+ I   HD+ ++H D+KP+N+L                           +
Sbjct: 112 TAINFTNQILDGIKHAHDMRIVHRDIKPQNIL---------------------------I 144

Query: 260 PKSSAIKVIDFG------STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 313
             +  +K+ DFG       T+  +   N+++ T  Y +PE   G       DI+S+G +L
Sbjct: 145 DSNKTLKIFDFGIAKALSETSLTQT--NHVLGTVQYFSPEQAKGEATDECTDIYSIGIVL 202

Query: 314 VELCTGE 320
            E+  GE
Sbjct: 203 YEMLVGE 209

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 76.4 bits (188), Expect = 2e-15
 Identities = 55/302 (18%), Positives = 109/302 (36%), Gaps = 57/302 (18%)

Query: 100 KIHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
            +   +G+G FG+V    W   R E VA+KI    ++       EI     L +H+   N
Sbjct: 45  VLQESIGKGRFGEVWRGKW---RGEEVAVKIFSSREERSWFREAEIYQTVML-RHE---N 97

Query: 159 ----RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                    ++       + +V +     SL+D+L +    +  ++ + ++A      +A
Sbjct: 98  ILGFIAADNKD-NGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLA 153

Query: 214 FMHD--------LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 265
            +H           + H DLK +N+L+  +    + D   ++     +      P     
Sbjct: 154 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR-- 211

Query: 266 KVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYP------CDIWSVGCILVELCTG 319
                             V T+ Y APEV+               DI+++G +  E+   
Sbjct: 212 ------------------VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 253

Query: 320 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVM 379
            ++   HE+ +          P  + M K V        ++ R + P    S E+++ + 
Sbjct: 254 CSIGGIHEDYQLPYYDLVPSDPSVEEMRKVV------CEQKLRPNIPNRWQSCEALRVMA 307

Query: 380 KL 381
           K+
Sbjct: 308 KI 309

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 75.5 bits (186), Expect = 2e-15
 Identities = 48/264 (18%), Positives = 82/264 (31%), Gaps = 77/264 (29%)

Query: 100 KIHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD---- 154
            +   +G+G +G+V    W   + E VA+KI     +       E+     L +H+    
Sbjct: 11  TLLECVGKGRYGEVWRGSW---QGENVAVKIFSSRDEKSWFRETELYNTVML-RHENILG 66

Query: 155 ------KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 207
                    +   Q+           ++       SLYD+L+     +        I   
Sbjct: 67  FIASDMTSRHSSTQL----------WLITHYHEMGSLYDYLQLT---TLDTVSCLRIVLS 113

Query: 208 LLECIAFMHDL--------CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM 259
           +   +A +H           + H DLK +N+L+           K +             
Sbjct: 114 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV-----------KKNGQ----------- 151

Query: 260 PKSSAIKVIDFG-------STTYERPDQNYIVSTRHYRAPEVILGLGWTYP------CDI 306
                  + D G       ST       N  V T+ Y APEV+               DI
Sbjct: 152 -----CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDI 206

Query: 307 WSVGCILVELCTGEALFQTHENLE 330
           W+ G +L E+          E+ +
Sbjct: 207 WAFGLVLWEVARRMVSNGIVEDYK 230

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 75.7 bits (187), Expect = 2e-15
 Identities = 75/339 (22%), Positives = 125/339 (36%), Gaps = 104/339 (30%)

Query: 106 GEGTFGQVL---ECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKGGNR 159
           G+G+FG+V    +    + +++ A+K+++      + R    +E ++L ++         
Sbjct: 33  GQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV--------N 84

Query: 160 C---VQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
               V++   F     + ++ + L G  L  F R +    F  + V+    +L   +  +
Sbjct: 85  HPFIVKLHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELALALDHL 142

Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H L +I+ DLKPEN+LL    +IK+ D+  S    K+S              ID     Y
Sbjct: 143 HSLGIIYRDLKPENILLDEEGHIKLTDFGLS----KES--------------IDHEKKAY 184

Query: 276 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 335
                     T  Y APEV+   G T   D WS G ++ E+ TG   FQ  +  E    M
Sbjct: 185 S------FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE---TM 235

Query: 336 ERVLG---PLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 392
             +L     +PQ +                        S E+                  
Sbjct: 236 TMILKAKLGMPQFL------------------------SPEAQ----------------- 254

Query: 393 DHSAGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 426
                    LL+ L + +P +RL        E  RH FF
Sbjct: 255 --------SLLRMLFKRNPANRLGAGPDGVEEIKRHSFF 285

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 75.4 bits (186), Expect = 2e-15
 Identities = 53/254 (20%), Positives = 90/254 (35%), Gaps = 69/254 (27%)

Query: 92  GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--------IKKY-REAAMI 142
             +L+ RY++   +G G   +V    D      VA+K++R           ++ REA   
Sbjct: 7   PSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREA--- 63

Query: 143 EIEVLQQLAK---------HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNN 192
                Q  A          +D G          +       IV E + G +L D +    
Sbjct: 64  -----QNAAALNHPAIVAVYDTGEAETPAGPLPY-------IVMEYVDGVTLRDIVHTE- 110

Query: 193 YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD 252
                     E+     + + F H   +IH D+KP N++                     
Sbjct: 111 -GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIM--------------------- 148

Query: 253 SSYFKRMPKSSAIKVIDFG------STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDI 306
                 +  ++A+KV+DFG       +         ++ T  Y +PE   G       D+
Sbjct: 149 ------ISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202

Query: 307 WSVGCILVELCTGE 320
           +S+GC+L E+ TGE
Sbjct: 203 YSLGCVLYEVLTGE 216

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 73.9 bits (182), Expect = 1e-14
 Identities = 69/338 (20%), Positives = 121/338 (35%), Gaps = 92/338 (27%)

Query: 106 GEGTFGQVL---ECWDRERKEMVAIKIVR-----GIKKYREAAMIEIEVLQQLAKHDKGG 157
           G G +G+V    +    +  ++ A+K+++        K  E    E +VL+ + +     
Sbjct: 63  GTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP--- 119

Query: 158 NRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 216
              V +   F     + ++ + + G  L+  L +     F    V+    +++  +  +H
Sbjct: 120 -FLVTLHYAFQTETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLH 176

Query: 217 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 276
            L +I+ D+K EN+LL S+ ++ + D+  S    K+              V D     Y+
Sbjct: 177 KLGIIYRDIKLENILLDSNGHVVLTDFGLS----KEF-------------VADETERAYD 219

Query: 277 RPDQNYIVSTRHYRAPEVILGL--GWTYPCDIWSVGCILVELCTGEALFQT-HENLEHLA 333
                    T  Y AP+++ G   G     D WS+G ++ EL TG + F    E      
Sbjct: 220 ------FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAE 273

Query: 334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 393
           +  R+L                    +    +P                       Q + 
Sbjct: 274 ISRRIL--------------------KSEPPYP-----------------------QEMS 290

Query: 394 HSAGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 426
             A D   L+Q LL  DP  RL      A E   H FF
Sbjct: 291 ALAKD---LIQRLLMKDPKKRLGCGPRDADEIKEHLFF 325

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 73.2 bits (180), Expect = 2e-14
 Identities = 65/361 (18%), Positives = 114/361 (31%), Gaps = 114/361 (31%)

Query: 100 KIHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD---- 154
           ++  ++G+G +G+V    W   R E VA+K+    ++       EI     + +H+    
Sbjct: 40  QMVKQIGKGRYGEVWMGKW---RGEKVAVKVFFTTEEASWFRETEIYQTVLM-RHENILG 95

Query: 155 ------KGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQ 207
                 KG     Q+           ++ +     SLYD+L+     +     + ++A  
Sbjct: 96  FIAADIKGTGSWTQL----------YLITDYHENGSLYDYLKST---TLDAKSMLKLAYS 142

Query: 208 LLECIAFMHDL--------CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM 259
            +  +  +H           + H DLK +N+L+           K +             
Sbjct: 143 SVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV-----------KKNGT----------- 180

Query: 260 PKSSAIKVIDFG-------STTYERPDQNYIVSTRHYRAPEVILGLGWTYP------CDI 306
                  + D G        T       N  V T+ Y  PEV+               D+
Sbjct: 181 -----CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADM 235

Query: 307 WSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYV-----RRG 361
           +S G IL E+          E  +           LP H L   D   E        ++ 
Sbjct: 236 YSFGLILWEVARRCVSGGIVEEYQ-----------LPYHDLVPSDPSYEDMREIVCIKKL 284

Query: 362 RLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL 421
           R  +P   +S E       L ++  L+ +   H               +P  RLTA    
Sbjct: 285 RPSFPNRWSSDEC------LRQMGKLMTECWAH---------------NPASRLTALRVK 323

Query: 422 R 422
           +
Sbjct: 324 K 324

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 70.8 bits (174), Expect = 1e-13
 Identities = 56/234 (23%), Positives = 95/234 (40%), Gaps = 49/234 (20%)

Query: 100 KIHSKMGEGTFGQVLEC-WDRE---RKEMVAIKIVRGIKKYREAAMI-EIEVLQQLAKHD 154
           K  S++G+G FG V  C +D        +VA+K ++     ++     EI++L+ L   D
Sbjct: 26  KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSD 84

Query: 155 KGGNRCVQIRN--WFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
                 V+ R   +   R  + +V E    G  L DFL+++  R     L+   + Q+ +
Sbjct: 85  F----IVKYRGVSYGPGRQSLRLVMEYLPSGC-LRDFLQRHRARLDASRLL-LYSSQICK 138

Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++     +H DL   N+ LV SE                            +K+ DF
Sbjct: 139 GMEYLGSRRCVHRDLAARNI-LVESEAH--------------------------VKIADF 171

Query: 271 GSTTYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCT 318
           G       D++Y V     +      APE +    ++   D+WS G +L EL T
Sbjct: 172 GLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 70.4 bits (173), Expect = 1e-13
 Identities = 52/252 (20%), Positives = 83/252 (32%), Gaps = 75/252 (29%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--------IKKY-REAAMIEIEVLQ 148
            Y++   +G G  G V E  D  R+ +VA+K++            +  REA        +
Sbjct: 35  PYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREA--------R 86

Query: 149 QLAK---------HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPI 198
              +         HD G           +    + +    + G  L   LR+        
Sbjct: 87  TAGRLQEPHVVPIHDFG-----------EIDGQLYVDMRLINGVDLAAMLRRQ--GPLAP 133

Query: 199 DLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKR 258
                I RQ+   +   H     H D+KPEN+L+                +  D      
Sbjct: 134 PRAVAIVRQIGSALDAAHAAGATHRDVKPENILV----------------SADD------ 171

Query: 259 MPKSSAIKVIDFG------STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCI 312
                   ++DFG           +      V T +Y APE       TY  DI+++ C+
Sbjct: 172 -----FAYLVDFGIASATTDEKLTQL--GNTVGTLYYMAPERFSESHATYRADIYALTCV 224

Query: 313 LVELCTGEALFQ 324
           L E  TG   +Q
Sbjct: 225 LYECLTGSPPYQ 236

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 70.0 bits (172), Expect = 2e-13
 Identities = 67/289 (23%), Positives = 109/289 (37%), Gaps = 65/289 (22%)

Query: 100 KIHSKMGEGTFGQVLEC-WDRER---KEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKH 153
           K    +GEG FG+V  C +D E     E VA+K ++      +      EIE+L+ L  H
Sbjct: 24  KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-YH 82

Query: 154 DK-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIAR 206
           +      G   C +     D  N I ++ E    G SL ++L KN  +      + + A 
Sbjct: 83  ENIVKYKG--ICTE-----DGGNGIKLIMEFLPSG-SLKEYLPKNKNKINLKQQL-KYAV 133

Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+ + + ++     +H DL   NV LV SE+                           +K
Sbjct: 134 QICKGMDYLGSRQYVHRDLAARNV-LVESEHQ--------------------------VK 166

Query: 267 VIDFGSTTYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCTGE 320
           + DFG T     D+ Y              APE ++   +    D+WS G  L EL T  
Sbjct: 167 IGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT-- 224

Query: 321 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG-RLDWPEG 368
             +   ++      ++ +     Q  + R+       ++ G RL  P  
Sbjct: 225 --YCDSDSSPMALFLKMIGPTHGQMTVTRL----VNTLKEGKRLPCPPN 267

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 69.5 bits (169), Expect = 3e-13
 Identities = 52/259 (20%), Positives = 81/259 (31%), Gaps = 62/259 (23%)

Query: 96  TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---------GIKKYREAAMIEIEV 146
           T + +   K+GEG FG+V +         VAIKI+            +K  E  + EI +
Sbjct: 19  TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIII 76

Query: 147 LQQLAKHDKG------------GNRCVQ-------IRNWFDYRN---------------- 171
            ++L+                    CVQ       ++ W  Y +                
Sbjct: 77  SKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQ 136

Query: 172 -HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMI-HTDLKPEN 229
             I + FE  G  L     K +     +   + I  QL   +A         H DL   N
Sbjct: 137 LFIVLEFEFGGIDLEQMRTKLS----SLATAKSILHQLTASLAVAEASLRFEHRDLHWGN 192

Query: 230 VLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHY 289
           VLL  +   K       LH   +            + +ID+  +  ER            
Sbjct: 193 VLLKKTSLKK-------LHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDV--S 243

Query: 290 RAPEVILGLGWTYPCDIWS 308
              ++  G G  Y  DI+ 
Sbjct: 244 MDEDLFTGDG-DYQFDIYR 261

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 69.0 bits (169), Expect = 7e-13
 Identities = 49/249 (19%), Positives = 98/249 (39%), Gaps = 42/249 (16%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK- 155
           +   +  K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH   
Sbjct: 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNL 278

Query: 156 ----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLL 209
               G   C +            I+ E    G+ L D+LR+ N +     ++  +A Q+ 
Sbjct: 279 VQLLG--VCTR-------EPPFYIITEFMTYGN-LLDYLRECNRQEVSAVVLLYMATQIS 328

Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
             + ++     IH +L   N L+  +  +KV D+  S       +Y         IK   
Sbjct: 329 SAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRL-MTGDTYTAHAGAKFPIK--- 384

Query: 270 FGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN 328
                              + APE +    ++   D+W+ G +L E+ T G + +   + 
Sbjct: 385 -------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 425

Query: 329 LEHLAMMER 337
            +   ++E+
Sbjct: 426 SQVYELLEK 434

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 67.2 bits (164), Expect = 2e-12
 Identities = 65/349 (18%), Positives = 112/349 (32%), Gaps = 79/349 (22%)

Query: 100 KIHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           K+   +G G +G V +       +  VA+K+     +        I  +  + +HD   N
Sbjct: 16  KLLELIGRGRYGAVYKGSL---DERPVAVKVFSFANRQNFINEKNIYRVPLM-EHD---N 68

Query: 159 --RCV--QIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
             R +    R   D R    +V E    GS L  +L  +   +        +A  +   +
Sbjct: 69  IARFIVGDERVTADGRMEYLLVMEYYPNGS-LXKYLSLH---TSDWVSSCRLAHSVTRGL 124

Query: 213 AFMHD---------LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSS 263
           A++H            + H DL   NVL+ +     + D+  S+    +         ++
Sbjct: 125 AYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNA 184

Query: 264 AIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-------GWTYPCDIWSVGCILVEL 316
           A                   V T  Y APEV+ G              D++++G I  E+
Sbjct: 185 A----------------ISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228

Query: 317 CTGEALFQTHENLEHLAM-MERVLGPLP--QHMLKRVDRHAEKYVRRGRLDWPEGAASRE 373
                     E++    M  +  +G  P  + M   V R       + R  +PE      
Sbjct: 229 FMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSR------EKQRPKFPEAWKENS 282

Query: 374 SIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 422
                + +  L+  I    D                D   RLTA+ A  
Sbjct: 283 -----LAVRSLKETIEDCWDQ---------------DAEARLTAQXAEE 311

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 66.2 bits (162), Expect = 3e-12
 Identities = 51/261 (19%), Positives = 96/261 (36%), Gaps = 61/261 (23%)

Query: 100 KIHSKMGEGTFGQVLE-------CWDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLA 151
             +  +G+GTF ++ +        + +  +  V +K++    + Y E+      ++ +L 
Sbjct: 11  IFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL- 69

Query: 152 KHDK-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREI 204
            H       G   CV         +   +V E  K GS L  +L+KN      +  + E+
Sbjct: 70  SHKHLVLNYG--VCVC-------GDENILVQEFVKFGS-LDTYLKKNKNCINILWKL-EV 118

Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
           A+QL   + F+ +  +IH ++  +N+LL+  E  K  +                      
Sbjct: 119 AKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGN-------------------PPF 159

Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYR------APEVIL-GLGWTYPCDIWSVGCILVELC 317
           IK+ D G +         ++     +       PE I          D WS G  L E+C
Sbjct: 160 IKLSDPGIS---I----TVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEIC 212

Query: 318 T-GEALFQTHENLEHLAMMER 337
           + G+      ++   L   E 
Sbjct: 213 SGGDKPLSALDSQRKLQFYED 233

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 66.1 bits (162), Expect = 3e-12
 Identities = 53/251 (21%), Positives = 99/251 (39%), Gaps = 56/251 (22%)

Query: 104 KMGEGTFGQVLE-CWDRERKEM-VAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGNR 159
           ++G G FG V +  +   +K++ VAIK+++    K   E  M E +++ QL  +      
Sbjct: 17  ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPY---- 71

Query: 160 CVQIRNWFDY----RNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
            V++             + +V E    G  L+ FL          ++  E+  Q+   + 
Sbjct: 72  IVRL-----IGVCQAEALMLVMEMAGGGP-LHKFLVGKREEIPVSNVA-ELLHQVSMGMK 124

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++ +   +H DL   NVLLV+  Y K+                            DFG +
Sbjct: 125 YLEEKNFVHRDLAARNVLLVNRHYAKIS---------------------------DFGLS 157

Query: 274 TYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH 326
                D +Y  +    +      APE I    ++   D+WS G  + E  + G+  ++  
Sbjct: 158 KALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 217

Query: 327 ENLEHLAMMER 337
           +  E +A +E+
Sbjct: 218 KGPEVMAFIEQ 228

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 65.4 bits (160), Expect = 6e-12
 Identities = 67/289 (23%), Positives = 107/289 (37%), Gaps = 67/289 (23%)

Query: 100 KIHSKMGEGTFGQVLEC-WDRE---RKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKH 153
           K    +GEG FG+V    +D       EMVA+K ++     ++R     EI++L+ L  H
Sbjct: 34  KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL-YH 92

Query: 154 DK-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIAR 206
           +      G   C            + +V E   LG SL D+L +++       L+   A+
Sbjct: 93  EHIIKYKG--CCED-----AGAASLQLVMEYVPLG-SLRDYLPRHSIG--LAQLL-LFAQ 141

Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+ E +A++H    IH DL   NV L+ ++ +                          +K
Sbjct: 142 QICEGMAYLHAQHYIHRDLAARNV-LLDNDRL--------------------------VK 174

Query: 267 VIDFGSTTYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCTGE 320
           + DFG          Y              APE +    + Y  D+WS G  L EL T  
Sbjct: 175 IGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT-- 232

Query: 321 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG-RLDWPEG 368
                         +E +     Q  + R+     + + RG RL  P+ 
Sbjct: 233 --HCDSSQSPPTKFLELIGIAQGQMTVLRL----TELLERGERLPRPDK 275

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 63.4 bits (155), Expect = 2e-11
 Identities = 51/254 (20%), Positives = 98/254 (38%), Gaps = 52/254 (20%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK- 155
           +   +  K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH   
Sbjct: 13  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNL 71

Query: 156 ----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLL 209
               G   C +            I+ E    G +L D+LR+ N +     ++  +A Q+ 
Sbjct: 72  VQLLG--VCTR-------EPPFYIITEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQIS 121

Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
             + ++     IH DL   N  LV   ++                          +KV D
Sbjct: 122 SAMEYLEKKNFIHRDLAARNC-LVGENHL--------------------------VKVAD 154

Query: 270 FGSTTYERPDQNYIVSTRH-----YRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALF 323
           FG +     D  Y           + APE +    ++   D+W+ G +L E+ T G + +
Sbjct: 155 FGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213

Query: 324 QTHENLEHLAMMER 337
              +  +   ++E+
Sbjct: 214 PGIDLSQVYELLEK 227

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 64.4 bits (157), Expect = 2e-11
 Identities = 66/249 (26%), Positives = 109/249 (43%), Gaps = 44/249 (17%)

Query: 97  SRYKIHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK 155
              ++  K+G+G FG+V    W+   +  VAIK ++      EA + E +V+++L +H+K
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK 240

Query: 156 GGNRCVQIRNWFDY----RNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLL 209
                VQ+     Y       I IV E    GS L DFL+    +   +  + ++A Q+ 
Sbjct: 241 ----LVQL-----YAVVSEEPIYIVTEYMSKGS-LLDFLKGETGKYLRLPQLVDMAAQIA 290

Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
             +A++  +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK   
Sbjct: 291 SGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIK--- 346

Query: 270 FGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN 328
                              + APE  L   +T   D+WS G +L EL T G   +    N
Sbjct: 347 -------------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 387

Query: 329 LEHLAMMER 337
            E L  +ER
Sbjct: 388 REVLDQVER 396

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 63.4 bits (155), Expect = 2e-11
 Identities = 57/252 (22%), Positives = 104/252 (41%), Gaps = 58/252 (23%)

Query: 104 KMGEGTFGQVLE-CWDRERKEM-VAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++G G FG V +  +  ++    VA+KI++        ++  + E  V+QQL  +     
Sbjct: 24  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPY--- 79

Query: 159 RCVQIRNWFDY----RNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
             V++               +V E  +LG  L  +L++N  R      + E+  Q+   +
Sbjct: 80  -IVRM-----IGICEAESWMLVMEMAELGP-LNKYLQQN--RHVKDKNIIELVHQVSMGM 130

Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
            ++ +   +H DL   NVLLV+  Y K+                            DFG 
Sbjct: 131 KYLEESNFVHRDLAARNVLLVTQHYAKIS---------------------------DFGL 163

Query: 273 TTYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCT-GEALFQT 325
           +   R D+NY  +  H +      APE I    ++   D+WS G ++ E  + G+  ++ 
Sbjct: 164 SKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 223

Query: 326 HENLEHLAMMER 337
            +  E  AM+E+
Sbjct: 224 MKGSEVTAMLEK 235

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 63.6 bits (155), Expect = 4e-11
 Identities = 63/246 (25%), Positives = 105/246 (42%), Gaps = 44/246 (17%)

Query: 100 KIHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
           K+  K+G G FG+V    +++  K  VA+K ++      EA + E  V++ L +HD    
Sbjct: 191 KLEKKLGAGQFGEVWMATYNKHTK--VAVKTMKPGSMSVEAFLAEANVMKTL-QHD---- 243

Query: 159 RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
           + V++      +  I I+ E +   SL DFL+ +     P+  + + + Q+ E +AF+  
Sbjct: 244 KLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 302

Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
              IH DL+  N+ LVS+  +                           K+ DFG      
Sbjct: 303 RNYIHRDLRAANI-LVSASLV--------------------------CKIADFGLARVIE 335

Query: 278 PDQNYIVSTRH-----YRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEH 331
            D  Y           + APE I    +T   D+WS G +L+E+ T G   +    N E 
Sbjct: 336 -DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV 394

Query: 332 LAMMER 337
           +  +ER
Sbjct: 395 IRALER 400

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 63.7 bits (155), Expect = 4e-11
 Identities = 66/249 (26%), Positives = 109/249 (43%), Gaps = 44/249 (17%)

Query: 97  SRYKIHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK 155
              ++  K+G+G FG+V    W+   +  VAIK ++      EA + E +V+++L +H+K
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTR--VAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK 323

Query: 156 GGNRCVQIRNWFDY----RNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLL 209
                VQ+     Y       I IV E    GS L DFL+    +   +  + ++A Q+ 
Sbjct: 324 ----LVQL-----YAVVSEEPIYIVTEYMSKGS-LLDFLKGETGKYLRLPQLVDMAAQIA 373

Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
             +A++  +  +H DL+  N+L+  +   KV D+  +    +D+ Y  R      IK   
Sbjct: 374 SGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIK--- 429

Query: 270 FGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN 328
                              + APE  L   +T   D+WS G +L EL T G   +    N
Sbjct: 430 -------------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 470

Query: 329 LEHLAMMER 337
            E L  +ER
Sbjct: 471 REVLDQVER 479

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 62.3 bits (152), Expect = 5e-11
 Identities = 55/265 (20%), Positives = 100/265 (37%), Gaps = 59/265 (22%)

Query: 100 KIHSKMGEGTFGQVLE-CWDRERKEM--VAIKIVR----GIKKYREAAMIEIEVLQQLAK 152
           ++  K+G+G+FG V    WD    +   VA+K ++       +  +  + E+  +  L  
Sbjct: 21  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-D 79

Query: 153 HDKGGNRCVQIRNWFDY----RNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIAR 206
           H       +++     Y       + +V E   LGS L D LRK+        L    A 
Sbjct: 80  HRN----LIRL-----YGVVLTPPMKMVTELAPLGS-LLDRLRKHQGHFLLGTLS-RYAV 128

Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
           Q+ E + ++     IH DL   N+LL + + +K+                          
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG------------------------- 163

Query: 267 VIDFGSTTYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCT-G 319
             DFG       + ++ V   H +      APE +    +++  D W  G  L E+ T G
Sbjct: 164 --DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYG 221

Query: 320 EALFQTHENLEHLAMMERVLGPLPQ 344
           +  +      + L  +++    LP+
Sbjct: 222 QEPWIGLNGSQILHKIDKEGERLPR 246

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 61.8 bits (151), Expect = 6e-11
 Identities = 63/254 (24%), Positives = 105/254 (41%), Gaps = 54/254 (21%)

Query: 97  SRYKIHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK 155
              K+  ++G G FG+V    ++   K  VA+K ++      +A + E  +++QL +H +
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAFLAEANLMKQL-QHQR 69

Query: 156 GGNRCVQIRNWFDY----RNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLL 209
                V++     Y    +  I I+ E  + GS L DFL+  +     I+ + ++A Q+ 
Sbjct: 70  ----LVRL-----YAVVTQEPIYIITEYMENGS-LVDFLKTPSGIKLTINKLLDMAAQIA 119

Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
           E +AF+ +   IH DL+  N+ LVS                               K+ D
Sbjct: 120 EGMAFIEERNYIHRDLRAANI-LVSDTLS--------------------------CKIAD 152

Query: 270 FGSTTYERPDQNYIVSTRH---YR--APEVILGLGWTYPCDIWSVGCILVELCT-GEALF 323
           FG       D  Y          +  APE I    +T   D+WS G +L E+ T G   +
Sbjct: 153 FGLARLIE-DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211

Query: 324 QTHENLEHLAMMER 337
               N E +  +ER
Sbjct: 212 PGMTNPEVIQNLER 225

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 62.3 bits (151), Expect = 1e-10
 Identities = 52/251 (20%), Positives = 99/251 (39%), Gaps = 56/251 (22%)

Query: 104 KMGEGTFGQVLE-CWDRERKEM-VAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGNR 159
           ++G G FG V +  +   +K++ VAIK+++    K   E  M E +++ QL  +      
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNPY---- 397

Query: 160 CVQIRNWFDY----RNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
            V++             + +V E    G  L+ FL          ++  E+  Q+   + 
Sbjct: 398 IVRL-----IGVCQAEALMLVMEMAGGGP-LHKFLVGKREEIPVSNVA-ELLHQVSMGMK 450

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++ +   +H +L   NVLLV+  Y K+                            DFG +
Sbjct: 451 YLEEKNFVHRNLAARNVLLVNRHYAKIS---------------------------DFGLS 483

Query: 274 TYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH 326
                D +Y  +    +      APE I    ++   D+WS G  + E  + G+  ++  
Sbjct: 484 KALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 543

Query: 327 ENLEHLAMMER 337
           +  E +A +E+
Sbjct: 544 KGPEVMAFIEQ 554

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 61.2 bits (149), Expect = 1e-10
 Identities = 57/257 (22%), Positives = 95/257 (36%), Gaps = 58/257 (22%)

Query: 100 KIHSKMGEGTFGQVLE-CW--DRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHD 154
            I   +G G  G+V         +R   VAIK ++    ++ R   + E  ++ Q   H 
Sbjct: 52  HIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF-DHP 110

Query: 155 K-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQ 207
                 G     +            IV E  + GS L  FLR ++ +   + LV  + R 
Sbjct: 111 NIIRLEG--VVTR-------GRLAMIVTEYMENGS-LDTFLRTHDGQFTIMQLV-GMLRG 159

Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           +   + ++ DL  +H DL   NV LV S  +                           KV
Sbjct: 160 VGAGMRYLSDLGYVHRDLAARNV-LVDSNLV--------------------------CKV 192

Query: 268 IDFGSTTYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCT-GE 320
            DFG +     D +   +T   +      APE I    ++   D+WS G ++ E+   GE
Sbjct: 193 SDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGE 252

Query: 321 ALFQTHENLEHLAMMER 337
             +    N + ++ +E 
Sbjct: 253 RPYWNMTNRDVISSVEE 269

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 60.3 bits (147), Expect = 2e-10
 Identities = 63/247 (25%), Positives = 99/247 (40%), Gaps = 46/247 (18%)

Query: 100 KIHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
               ++G G FG V    W  + K  VAIK +R      E  + E EV+ +L  H K   
Sbjct: 11  TFVQEIGSGQFGLVHLGYWLNKDK--VAIKTIREGAMSEEDFIEEAEVMMKL-SHPK--- 64

Query: 159 RCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 216
             VQ+      +  IC+V E  + G  L D+LR          L+  +   + E +A++ 
Sbjct: 65  -LVQLYGVCLEQAPICLVTEFMEHGC-LSDYLRTQRGLFAAETLL-GMCLDVCEGMAYLE 121

Query: 217 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 276
           + C+IH DL   N  LV    +                          IKV DFG T + 
Sbjct: 122 EACVIHRDLAARNC-LVGENQV--------------------------IKVSDFGMTRFV 154

Query: 277 RPDQNYIVSTRH-----YRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 330
             D  Y  ST       + +PEV     ++   D+WS G ++ E+ + G+  ++   N E
Sbjct: 155 -LDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 213

Query: 331 HLAMMER 337
            +  +  
Sbjct: 214 VVEDIST 220

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 60.3 bits (147), Expect = 2e-10
 Identities = 56/247 (22%), Positives = 95/247 (38%), Gaps = 46/247 (18%)

Query: 100 KIHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
            +  ++G G FG V    W  +    VA+K+++      +    E + + +L  H K   
Sbjct: 11  TLLKELGSGQFGVVKLGKWKGQYD--VAVKMIKEGSMSEDEFFQEAQTMMKL-SHPK--- 64

Query: 159 RCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 216
             V+          I IV E    G  L ++LR +     P  L+ E+   + E +AF+ 
Sbjct: 65  -LVKFYGVCSKEYPIYIVTEYISNGC-LLNYLRSHGKGLEPSQLL-EMCYDVCEGMAFLE 121

Query: 217 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 276
               IH DL   N  LV  +                            +KV DFG T Y 
Sbjct: 122 SHQFIHRDLAARNC-LVDRDLC--------------------------VKVSDFGMTRYV 154

Query: 277 RPDQNYIVSTRH-----YRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 330
             D  Y+ S        + APEV     ++   D+W+ G ++ E+ + G+  +  + N E
Sbjct: 155 L-DDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE 213

Query: 331 HLAMMER 337
            +  + +
Sbjct: 214 VVLKVSQ 220

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 61.2 bits (149), Expect = 2e-10
 Identities = 57/255 (22%), Positives = 101/255 (39%), Gaps = 48/255 (18%)

Query: 97  SRYKIHSKMGEGTFGQVLE-CW--DRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLA 151
           +   I   +G G FG+V         +++  VAIK ++    +K R   + E  ++ Q  
Sbjct: 45  TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF- 103

Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLL 209
            H       +++         + IV E  + GS L  FLRK++ +   I LV  + R + 
Sbjct: 104 DHPN----IIRLEGVVTKSKPVMIVTEYMENGS-LDSFLRKHDAQFTVIQLV-GMLRGIA 157

Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
             + ++ D+  +H DL   N+ L++S  +                           KV D
Sbjct: 158 SGMKYLSDMGYVHRDLAARNI-LINSNLV--------------------------CKVSD 190

Query: 270 FGSTTYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCT-GEAL 322
           FG       D     +TR  +      +PE I    +T   D+WS G +L E+ + GE  
Sbjct: 191 FGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250

Query: 323 FQTHENLEHLAMMER 337
           +    N + +  ++ 
Sbjct: 251 YWEMSNQDVIKAVDE 265

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 60.3 bits (147), Expect = 4e-10
 Identities = 53/254 (20%), Positives = 91/254 (35%), Gaps = 56/254 (22%)

Query: 100 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGG 157
            +  ++G G FG+V     R    +VA+K  R       +   + E  +L+Q   H    
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY-SHPN-- 173

Query: 158 NRCVQIRNWFDY-----RNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
              V++           +  I IV E  + G     FLR    R     L+ ++      
Sbjct: 174 --IVRL-----IGVCTQKQPIYIVMELVQGG-DFLTFLRTEGARLRVKTLL-QMVGDAAA 224

Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++   C IH DL   N  LV+ + +                          +K+ DF
Sbjct: 225 GMEYLESKCCIHRDLAARNC-LVTEKNV--------------------------LKISDF 257

Query: 271 GSTTYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCT-GEALF 323
           G +  E  D  Y  S    +      APE +    ++   D+WS G +L E  + G + +
Sbjct: 258 GMSREEA-DGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPY 316

Query: 324 QTHENLEHLAMMER 337
               N +    +E+
Sbjct: 317 PNLSNQQTREFVEK 330

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 59.6 bits (145), Expect = 5e-10
 Identities = 49/255 (19%), Positives = 101/255 (39%), Gaps = 55/255 (21%)

Query: 100 KIHSKMGEGTFGQVLEC-WDRERKEM---VAIKIVRG--IKKYREAAMIEIEVLQQLAKH 153
           K    +G G FG V +  W  E +++   VAIK +R     K  +  + E  V+  +  +
Sbjct: 18  KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DN 76

Query: 154 DKGGNRCVQIRNWFDY----RNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQ 207
                   ++           + + ++ +    G  L D++R++        L+     Q
Sbjct: 77  PH----VCRL-----LGICLTSTVQLITQLMPFGC-LLDYVREHKDNIGSQYLL-NWCVQ 125

Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK----RMPKSS 263
           + + + ++ D  ++H DL   NVL+ + +++K+ D+  +     +   +     ++P   
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--- 182

Query: 264 AIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEAL 322
            IK                      + A E IL   +T+  D+WS G  + EL T G   
Sbjct: 183 -IK----------------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219

Query: 323 FQTHENLEHLAMMER 337
           +      E  +++E+
Sbjct: 220 YDGIPASEISSILEK 234

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 58.4 bits (142), Expect = 8e-10
 Identities = 54/247 (21%), Positives = 101/247 (40%), Gaps = 46/247 (18%)

Query: 100 KIHSKMGEGTFGQVLEC-WDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
               ++G G FG V    W  +    VAIK+++      +  + E +V+  L  H+K   
Sbjct: 27  TFLKELGTGQFGVVKYGKWRGQYD--VAIKMIKEGSMSEDEFIEEAKVMMNL-SHEK--- 80

Query: 159 RCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 216
             VQ+      +  I I+ E    G  L ++LR+  +R     L+ E+ + + E + ++ 
Sbjct: 81  -LVQLYGVCTKQRPIFIITEYMANGC-LLNYLREMRHRFQTQQLL-EMCKDVCEAMEYLE 137

Query: 217 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 276
               +H DL   N  LV+ + +                          +KV DFG + Y 
Sbjct: 138 SKQFLHRDLAARNC-LVNDQGV--------------------------VKVSDFGLSRYV 170

Query: 277 RPDQNYIVSTRH-----YRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE 330
             D+ Y  S        +  PEV++   ++   DIW+ G ++ E+ + G+  ++   N E
Sbjct: 171 LDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE 229

Query: 331 HLAMMER 337
               + +
Sbjct: 230 TAEHIAQ 236

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 58.5 bits (142), Expect = 1e-09
 Identities = 55/261 (21%), Positives = 97/261 (37%), Gaps = 59/261 (22%)

Query: 97  SRYKIHSKMGEGTFGQVLE-CW---DRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQL 150
           S       +G G FG+V +        +++  VAIK ++    +K R   + E  ++ Q 
Sbjct: 44  SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 103

Query: 151 AKHDK-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVRE 203
             H       G     +          + I+ E  + G+ L  FLR+ +     + LV  
Sbjct: 104 -SHHNIIRLEG--VISK-------YKPMMIITEYMENGA-LDKFLREKDGEFSVLQLV-G 151

Query: 204 IARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSS 263
           + R +   + ++ ++  +H DL   N+ LV+S  +                         
Sbjct: 152 MLRGIAAGMKYLANMNYVHRDLAARNI-LVNSNLV------------------------- 185

Query: 264 AIKVIDFGSTTYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELC 317
             KV DFG +     D     +T   +      APE I    +T   D+WS G ++ E+ 
Sbjct: 186 -CKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVM 244

Query: 318 T-GEALFQTHENLEHLAMMER 337
           T GE  +    N E +  +  
Sbjct: 245 TYGERPYWELSNHEVMKAIND 265

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 56.2 bits (136), Expect = 6e-09
 Identities = 53/258 (20%), Positives = 98/258 (37%), Gaps = 55/258 (21%)

Query: 97  SRYKIHSKMGEGTFGQVLEC-WDRERKEM---VAIKIVRGI--KKYREAAMIEIEVLQQL 150
           +  +    +G G FG V +  W  E + +   V IK++     ++  +A    +  +  L
Sbjct: 13  TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 72

Query: 151 AKHDKGGNRCVQIRNWFDY----RNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREI 204
             H       V++           + + +V +   LGS L D +R++     P  L+   
Sbjct: 73  -DHAH----IVRL-----LGLCPGSSLQLVTQYLPLGS-LLDHVRQHRGALGPQLLL-NW 120

Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK----RMP 260
             Q+ + + ++ +  M+H +L   NVLL S   ++V D+  +   P D         + P
Sbjct: 121 GVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP 180

Query: 261 KSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-G 319
               IK                      + A E I    +T+  D+WS G  + EL T G
Sbjct: 181 ----IK----------------------WMALESIHFGKYTHQSDVWSYGVTVWELMTFG 214

Query: 320 EALFQTHENLEHLAMMER 337
              +      E   ++E+
Sbjct: 215 AEPYAGLRLAEVPDLLEK 232

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 54.9 bits (133), Expect = 1e-08
 Identities = 59/250 (23%), Positives = 98/250 (39%), Gaps = 47/250 (18%)

Query: 100 KIHSKMGEGTFGQVLE-CWDRERKE--MVAIKIVRG--IKKYREAAMIEIEVLQQLAKHD 154
           ++   +GEG FG V +  +         VAIK  +       RE  + E   ++Q   H 
Sbjct: 18  ELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHP 76

Query: 155 KGGNRCVQIRNWFDY----RNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQL 208
                 V++           N + I+ E   LG  L  FL+   Y      L+   A QL
Sbjct: 77  H----IVKL-----IGVITENPVWIIMELCTLGE-LRSFLQVRKYSLDLASLI-LYAYQL 125

Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
              +A++     +H D+   NVL+ S++ +K+ D+  S +  +DS+Y+K       IK  
Sbjct: 126 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIK-- 182

Query: 269 DFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE 327
                               + APE I    +T   D+W  G  + E+   G   FQ  +
Sbjct: 183 --------------------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 222

Query: 328 NLEHLAMMER 337
           N + +  +E 
Sbjct: 223 NNDVIGRIEN 232

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 54.4 bits (131), Expect = 2e-08
 Identities = 31/254 (12%), Positives = 54/254 (21%), Gaps = 65/254 (25%)

Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREAAMIEIEVLQQL 150
              RY++    G     Q  +  D      VA+  V           +  +     L ++
Sbjct: 29  ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI 88

Query: 151 AKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLL 209
                      ++ +    R    +V E + G SL +          P+  +R   + L 
Sbjct: 89  D-KP----GVARVLDVVHTRAGGLVVAEWIRGGSLQEVADT---SPSPVGAIR-AMQSLA 139

Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
                 H   +  +   P  V +                                + +  
Sbjct: 140 AAADAAHRAGVALSIDHPSRVRVSI---------------------------DGDVVLAY 172

Query: 270 FGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 329
                                              DI  +G  L  L             
Sbjct: 173 PA-----------------TMPDA-------NPQDDIRGIGASLYALLVNRWPLPEAGVR 208

Query: 330 EHLAMMERVLGPLP 343
             LA  ER     P
Sbjct: 209 SGLAPAERDTAGQP 222

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 54.6 bits (132), Expect = 2e-08
 Identities = 49/255 (19%), Positives = 101/255 (39%), Gaps = 55/255 (21%)

Query: 100 KIHSKMGEGTFGQVLEC-WDRERKEM---VAIKIVRG--IKKYREAAMIEIEVLQQLAKH 153
           K    +G G FG V +  W  E +++   VAIK +R     K  +  + E  V+  +  +
Sbjct: 18  KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DN 76

Query: 154 DKGGNRCVQIRNWFDY----RNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQ 207
                   ++           + + ++ +    G  L D++R++        L+     Q
Sbjct: 77  PH----VCRL-----LGICLTSTVQLITQLMPFGC-LLDYVREHKDNIGSQYLL-NWCVQ 125

Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK----RMPKSS 263
           + + + ++ D  ++H DL   NVL+ + +++K+ D+  +     +   +     ++P   
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--- 182

Query: 264 AIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEAL 322
            IK                      + A E IL   +T+  D+WS G  + EL T G   
Sbjct: 183 -IK----------------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219

Query: 323 FQTHENLEHLAMMER 337
           +      E  +++E+
Sbjct: 220 YDGIPASEISSILEK 234

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 53.7 bits (130), Expect = 3e-08
 Identities = 52/256 (20%), Positives = 97/256 (37%), Gaps = 59/256 (23%)

Query: 100 KIHSKMGEGTFGQVLE-CW--DRERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLAKHD 154
            ++  +GEG FG+V E  +   +  K  VA+K  +       +E  M E  +++ L  H 
Sbjct: 15  VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL-DHP 73

Query: 155 KGGNRCVQIRNWFDY----RNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQL 208
                 V++               I+ E    G  L  +L +N      + LV   + Q+
Sbjct: 74  H----IVKL-----IGIIEEEPTWIIMELYPYGE-LGHYLERNKNSLKVLTLV-LYSLQI 122

Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
            + +A++  +  +H D+   N+ LV+S                             +K+ 
Sbjct: 123 CKAMAYLESINCVHRDIAVRNI-LVASPEC--------------------------VKLG 155

Query: 269 DFGSTTYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCT-GEA 321
           DFG + Y   +  Y       R      +PE I    +T   D+W     + E+ + G+ 
Sbjct: 156 DFGLSRYIEDEDYY--KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQ 213

Query: 322 LFQTHENLEHLAMMER 337
            F   EN + + ++E+
Sbjct: 214 PFFWLENKDVIGVLEK 229

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 53.5 bits (129), Expect = 6e-08
 Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 20/153 (13%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK- 155
              K+   +G+G FG V+    R  K  VA+K ++      +A + E  V+ QL +H   
Sbjct: 193 KELKLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKNDAT-AQAFLAEASVMTQL-RHSNL 248

Query: 156 ----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLL 209
               G    V+       +  + IV E    GS L D+LR         D + + +  + 
Sbjct: 249 VQLLG--VIVE------EKGGLYIVTEYMAKGS-LVDYLRSRGRSVLGGDCLLKFSLDVC 299

Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPD 242
           E + ++     +H DL   NVL+      KV D
Sbjct: 300 EAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSD 332

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 53.3 bits (128), Expect = 8e-08
 Identities = 58/251 (23%), Positives = 97/251 (38%), Gaps = 49/251 (19%)

Query: 100 KIHSKMGEGTFGQVLE-CW--DRERKEMVAIKIVRG--IKKYREAAMIEIEVLQQLAKHD 154
           ++   +GEG FG V +  +         VAIK  +       RE  + E   ++Q   H 
Sbjct: 393 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHP 451

Query: 155 K-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQ 207
                 G     +        N + I+ E   LG  L  FL+   +      L+   A Q
Sbjct: 452 HIVKLIG--VITE--------NPVWIIMELCTLGE-LRSFLQVRKFSLDLASLI-LYAYQ 499

Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           L   +A++     +H D+   NVL+ S++ +K+ D+  S +  +DS+Y+K       IK 
Sbjct: 500 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIK- 557

Query: 268 IDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH 326
                                + APE I    +T   D+W  G  + E+   G   FQ  
Sbjct: 558 ---------------------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 596

Query: 327 ENLEHLAMMER 337
           +N + +  +E 
Sbjct: 597 KNNDVIGRIEN 607

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 51.9 bits (125), Expect = 1e-07
 Identities = 60/253 (23%), Positives = 89/253 (35%), Gaps = 72/253 (28%)

Query: 97  SRYKIHSKMGEGTFGQVLEC-WDRERKEM-VAIKIVRGI--KKYREAAMIEIEVLQQLAK 152
           +  K    +GEG FGQVL+    ++   M  AIK ++    K        E+EVL +L  
Sbjct: 25  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84

Query: 153 HDK-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIA 205
           H       G   C         R ++ +  E    G +L DFLRK+             +
Sbjct: 85  HPNIINLLG--ACEH-------RGYLYLAIEYAPHG-NLLDFLRKSRVLETDPAFAIANS 134

Query: 206 -------RQLLEC---IA----FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK 251
                  +QLL     +A    ++     IH DL   N+ LV   Y+             
Sbjct: 135 TASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNI-LVGENYV------------- 180

Query: 252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR------APEVILGLGWTYPCD 305
                         K+ DFG +   R  Q   V     R      A E +    +T   D
Sbjct: 181 -------------AKIADFGLS---R-GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSD 223

Query: 306 IWSVGCILVELCT 318
           +WS G +L E+ +
Sbjct: 224 VWSYGVLLWEIVS 236

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 51.4 bits (124), Expect = 2e-07
 Identities = 54/254 (21%), Positives = 93/254 (36%), Gaps = 58/254 (22%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK- 155
              K+   +G+G FG V+    R  K  VA+K ++      +A + E  V+ QL +H   
Sbjct: 21  KELKLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKN-DATAQAFLAEASVMTQL-RHSNL 76

Query: 156 ----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLL 209
               G    +      + +  + IV E    GS L D+LR         D + + +  + 
Sbjct: 77  VQLLG---VI-----VEEKGGLYIVTEYMAKGS-LVDYLRSRGRSVLGGDCLLKFSLDVC 127

Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
           E + ++     +H DL   NV LVS + +                           KV D
Sbjct: 128 EAMEYLEGNNFVHRDLAARNV-LVSEDNV--------------------------AKVSD 160

Query: 270 FGSTTYERPDQNYIVSTRH---YR--APEVILGLGWTYPCDIWSVGCILVELCT-GEALF 323
           FG T                   +  APE +    ++   D+WS G +L E+ + G   +
Sbjct: 161 FGLTKEA-----SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 215

Query: 324 QTHENLEHLAMMER 337
                 + +  +E+
Sbjct: 216 PRIPLKDVVPRVEK 229

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 49.2 bits (118), Expect = 1e-06
 Identities = 54/257 (21%), Positives = 80/257 (31%), Gaps = 72/257 (28%)

Query: 97  SRYKIHSKMGEGTFGQVLEC-----WDRERKEMVAIKIVRGIKKYREAA--MIEIEVLQQ 149
           +R      +G G FG+V+E         +    VA+K+++      E    M E++VL  
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 150 LAKHDK-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVR 202
           L  H       G   C              ++ E    G  L +FLR+            
Sbjct: 83  LGNHMNIVNLLG--ACTI-------GGPTLVITEYCCYG-DLLNFLRRKRDSFICSKTSP 132

Query: 203 EIARQLLECIAFMHDLCM----------------IHTDLKPENVLLVSSEYIKVPDYKSS 246
            I       +     L                  IH DL   N+ L++   I        
Sbjct: 133 AIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNI-LLTHGRI-------- 183

Query: 247 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR-----APEVILGLGWT 301
                              K+ DFG     + D NY+V           APE I    +T
Sbjct: 184 ------------------TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYT 225

Query: 302 YPCDIWSVGCILVELCT 318
           +  D+WS G  L EL +
Sbjct: 226 FESDVWSYGIFLWELFS 242

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 48.4 bits (116), Expect = 2e-06
 Identities = 61/305 (20%), Positives = 107/305 (35%), Gaps = 90/305 (29%)

Query: 97  SRYKIHSKMGEGTFGQVLEC-----WDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQ 149
           +  +    +G G FG+V+E         +    VA+K+++       +EA M E++++  
Sbjct: 46  NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105

Query: 150 LAKHDK-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKN--NYRSFPIDL 200
           L +H+      G   C            + ++ E    G  L +FLR+      + P   
Sbjct: 106 LGQHENIVNLLGA--CTH-------GGPVLVITEYCCYG-DLLNFLRRKSRVLETDPAFA 155

Query: 201 VREIARQLLECIAFMHDLC--M--------IHTDLKPENVLLVSSEYIKVPDYKSSLHTP 250
           +        + + F   +   M        IH D+   NV L+++ ++            
Sbjct: 156 IANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNV-LLTNGHV------------ 202

Query: 251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTR-----HYRAPEVILGLGWTYPCD 305
                          K+ DFG       D NYIV         + APE I    +T   D
Sbjct: 203 --------------AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSD 248

Query: 306 IWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG-RLD 364
           +WS G +L E+ +             L +      P P  +   V+    K V+ G ++ 
Sbjct: 249 VWSYGILLWEIFS-------------LGLN-----PYPGIL---VNSKFYKLVKDGYQMA 287

Query: 365 WPEGA 369
            P  A
Sbjct: 288 QPAFA 292

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* Length = 258

 Score = 47.4 bits (112), Expect = 3e-06
 Identities = 26/161 (16%), Positives = 57/161 (35%), Gaps = 12/161 (7%)

Query: 100 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 159
           KI+ ++    F ++ E       E   ++ +   +K       E   L++  +    G  
Sbjct: 80  KIY-RIETSEFDKMDEY--LYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEA---GVS 133

Query: 160 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
             Q    + Y  ++ ++       L         R      V  I   ++E +  ++   
Sbjct: 134 VPQP---YTYMKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEA 190

Query: 220 -MIHTDLKPENVLLVSS-EYIKVPDYKSSLHTPKDSSYFKR 258
            ++H DL   N++ +    +I +    +  H P   SY +R
Sbjct: 191 ELVHADLSEYNIMYIDKVYFIDMGQAVTLRH-PMAESYLER 230

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 47.3 bits (113), Expect = 5e-06
 Identities = 51/255 (20%), Positives = 86/255 (33%), Gaps = 69/255 (27%)

Query: 97  SRYKIHSKMGEGTFGQVLEC-----WDRERKEMVAIKIVRGIKKYREAA--MIEIEVLQQ 149
            R K+   +G G FGQV+E              VA+K+++    + E    M E+++L  
Sbjct: 27  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86

Query: 150 LAKHDK-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKN----NYRSFPI 198
           +  H       G                + ++ E  K G +L  +LR             
Sbjct: 87  IGHHLNVVNLLG---AC-----TKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKVAP 137

Query: 199 DLVREIARQLLECIAFMHDLC--M--------IHTDLKPENVLLVSSEYIKVPDYKSSLH 248
           + + +    L   I +   +   M        IH DL   N+ L+S + +          
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI-LLSEKNV---------- 186

Query: 249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR-----APEVILGLGWTYP 303
                           +K+ DFG       D +Y+            APE I    +T  
Sbjct: 187 ----------------VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 230

Query: 304 CDIWSVGCILVELCT 318
            D+WS G +L E+ +
Sbjct: 231 SDVWSFGVLLWEIFS 245

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 46.1 bits (109), Expect = 1e-05
 Identities = 58/339 (17%), Positives = 105/339 (30%), Gaps = 91/339 (26%)

Query: 100 KIHSKMGEGTFGQVLEC-----WDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAK 152
           K+   +G G FGQV+E              VA+K+++         A M E+++L  +  
Sbjct: 25  KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 84

Query: 153 HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
           H    N    +         + ++ E     +L  +LR    R+  +    + AR     
Sbjct: 85  HL---NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK--RNEFVPYKTKGARFR--- 136

Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY--KSSLHTPKDSSYFKRMPKSSA----- 264
                 +  I  DLK     + SS+      +  + SL   ++    + + K        
Sbjct: 137 -QGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHL 195

Query: 265 ------------------------------------IKVIDFGSTTYERPDQNYIVSTRH 288
                                               +K+ DFG       D +Y+     
Sbjct: 196 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255

Query: 289 YR-----APEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLP 343
                  APE I    +T   D+WS G +L E+ +                    LG  P
Sbjct: 256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS--------------------LGASP 295

Query: 344 -QHMLKRVDRHAEKYVRRG-RLDWPEGAASRESIKSVMK 380
              +  ++D    + ++ G R+  P+       +   M 
Sbjct: 296 YPGV--KIDEEFCRRLKEGTRMRAPDYT--TPEMYQTML 330

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 30/155 (19%), Positives = 54/155 (34%), Gaps = 23/155 (14%)

Query: 100 KIHSKMGEGTFGQVLEC---WDRERKEMVAIKIVRGIKKYREAA--MIEIEVLQQLAKHD 154
             +  +G G FG V       +  +K   A+K +  I    E +  + E  +++    H 
Sbjct: 28  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHP 86

Query: 155 K-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQ 207
                 G                  +V    K G  L +F+R   +     DL+     Q
Sbjct: 87  NVLSLLG---IC-----LRSEGSPLVVLPYMKHG-DLRNFIRNETHNPTVKDLIG-FGLQ 136

Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPD 242
           + + + ++     +H DL   N +L     +KV D
Sbjct: 137 VAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVAD 171

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 45.5 bits (108), Expect = 2e-05
 Identities = 45/251 (17%), Positives = 84/251 (33%), Gaps = 58/251 (23%)

Query: 100 KIHSKMGEGTFGQVLE--CWDRERKEM-VAIKIVRGIKKYREAA--MIEIEVLQQLAKHD 154
             +  +G G FG V      D + K++  A+K +  I    E +  + E  +++    H 
Sbjct: 92  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHP 150

Query: 155 K-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQ 207
                 G                  +V    K G  L +F+R   +     DL+     Q
Sbjct: 151 NVLSLLG---IC-----LRSEGSPLVVLPYMKHG-DLRNFIRNETHNPTVKDLIG-FGLQ 200

Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           + + + F+     +H DL   N  ++  ++                           +KV
Sbjct: 201 VAKGMKFLASKKFVHRDLAARNC-MLDEKFT--------------------------VKV 233

Query: 268 IDFG-STTYERPDQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGCILVELCT-G 319
            DFG +      + + + +    +      A E +    +T   D+WS G +L EL T G
Sbjct: 234 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 293

Query: 320 EALFQTHENLE 330
              +      +
Sbjct: 294 APPYPDVNTFD 304

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 44.5 bits (106), Expect = 4e-05
 Identities = 31/121 (25%), Positives = 47/121 (38%), Gaps = 37/121 (30%)

Query: 204 IARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSS 263
            A  +     F+H+   IH D+K  N+LL                   D ++     K S
Sbjct: 142 AANGI----NFLHENHHIHRDIKSANILL-------------------DEAF---TAKIS 175

Query: 264 AIKVIDFGSTTYERPDQNYIVSTR-----HYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                DFG           ++++R      Y APE + G   T   DI+S G +L+E+ T
Sbjct: 176 -----DFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIIT 229

Query: 319 G 319
           G
Sbjct: 230 G 230

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 44.7 bits (106), Expect = 4e-05
 Identities = 51/257 (19%), Positives = 93/257 (36%), Gaps = 72/257 (28%)

Query: 97  SRYKIHSKMGEGTFGQVLEC-------WDRERKEMVAIKIVRGIKKYREAA--MIEIEVL 147
            R  +   +GEG FGQV+             R   VA+K+++     ++ +  + E+E++
Sbjct: 69  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128

Query: 148 QQLAKHDK-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKN----NYRSF 196
           + + KH       G   C Q          + ++ E    G +L ++L+         S+
Sbjct: 129 KMIGKHKNIINLLG--ACTQ-------DGPLYVIVEYASKG-NLREYLQARRPPGLEYSY 178

Query: 197 PIDLVREIARQLLECIAFMHDLC--M--------IHTDLKPENVLLVSSEYIKVPDYKSS 246
                 E      + ++  + +   M        IH DL   NV LV+ + +        
Sbjct: 179 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNV-LVTEDNV-------- 229

Query: 247 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTR-----HYRAPEVILGLGWT 301
                             +K+ DFG          Y  +T       + APE +    +T
Sbjct: 230 ------------------MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 271

Query: 302 YPCDIWSVGCILVELCT 318
           +  D+WS G +L E+ T
Sbjct: 272 HQSDVWSFGVLLWEIFT 288

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 43.4 bits (103), Expect = 8e-05
 Identities = 57/260 (21%), Positives = 90/260 (34%), Gaps = 83/260 (31%)

Query: 97  SRYKIHSKMGEGTFGQVLEC-----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQL 150
               +  ++GEG FG+V           + K +VA+K ++   +  R+    E E+L  L
Sbjct: 41  RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML 100

Query: 151 AKHDK-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVRE 203
            +H       G   C +          + +VFE  + G  L  FLR +   +  +    +
Sbjct: 101 -QHQHIVRFFG--VCTE-------GRPLLMVFEYMRHG-DLNRFLRSHGPDAKLLAGGED 149

Query: 204 IARQLLECIAFMH-------------DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP 250
           +A   L     +               L  +H DL   N  LV    +            
Sbjct: 150 VAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNC-LVGQGLV------------ 196

Query: 251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR------------APEVILGL 298
                         +K+ DFG +   R     I ST +YR             PE IL  
Sbjct: 197 --------------VKIGDFGMS---R----DIYSTDYYRVGGRTMLPIRWMPPESILYR 235

Query: 299 GWTYPCDIWSVGCILVELCT 318
            +T   D+WS G +L E+ T
Sbjct: 236 KFTTESDVWSFGVVLWEIFT 255

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 44/255 (17%), Positives = 83/255 (32%), Gaps = 60/255 (23%)

Query: 104 KMGEGTFGQVLEC---WDRERKEMVAIKIVRGIKKYREAA--MIEIEVLQQLAKHDK--- 155
            +G+G FG V         + +   AIK +  I + ++    + E  +++ L  H     
Sbjct: 28  VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGL-NHPNVLA 86

Query: 156 --GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
             G    +             ++      G  L  F+R         DL+     Q+   
Sbjct: 87  LIG---IM-----LPPEGLPHVLLPYMCHGD-LLQFIRSPQRNPTVKDLI-SFGLQVARG 136

Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           + ++ +   +H DL   N  ++   +                           +KV DFG
Sbjct: 137 MEYLAEQKFVHRDLAARNC-MLDESFT--------------------------VKVADFG 169

Query: 272 STTYERPDQNYIVSTRHYR--------APEVILGLGWTYPCDIWSVGCILVELCT-GEAL 322
                  D+ Y    +H          A E +    +T   D+WS G +L EL T G   
Sbjct: 170 LARDIL-DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPP 228

Query: 323 FQTHENLEHLAMMER 337
           ++  +  +    + +
Sbjct: 229 YRHIDPFDLTHFLAQ 243

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 51/259 (19%), Positives = 93/259 (35%), Gaps = 76/259 (29%)

Query: 97  SRYKIHSKMGEGTFGQVLEC-------WDRERKEMVAIKIVRGIKKYREAA--MIEIEVL 147
            +  +   +GEG FGQV+            +    VA+K+++     ++ +  + E+E++
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94

Query: 148 QQLAKHDK-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDL 200
           + + KH       G   C Q          + ++ E    G +L ++LR    R   ++ 
Sbjct: 95  KMIGKHKNIINLLG--ACTQ-------DGPLYVIVEYASKG-NLREYLRAR--RPPGMEY 142

Query: 201 VREIARQLLECIAFMHDLCM----------------IHTDLKPENVLLVSSEYIKVPDYK 244
             +I R   E + F   +                  IH DL   NV LV+   +      
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV-LVTENNV------ 195

Query: 245 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTR-----HYRAPEVILGLG 299
                               +K+ DFG          Y  +T       + APE +    
Sbjct: 196 --------------------MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV 235

Query: 300 WTYPCDIWSVGCILVELCT 318
           +T+  D+WS G ++ E+ T
Sbjct: 236 YTHQSDVWSFGVLMWEIFT 254

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 41.9 bits (99), Expect = 3e-04
 Identities = 55/262 (20%), Positives = 89/262 (33%), Gaps = 77/262 (29%)

Query: 97  SRYKIHSKMGEGTFGQVLEC-----WDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQ 149
              +    +G G FG+V+               VA+K+++       REA M E++++ Q
Sbjct: 45  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104

Query: 150 LAKHDK-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVR 202
           L  H+      G   C            I ++FE    G  L ++LR    +    ++  
Sbjct: 105 LGSHENIVNLLGA--CTL-------SGPIYLIFEYCCYG-DLLNYLRSKREKFSEDEIEY 154

Query: 203 EIARQLLECIAF----MHDLCM-----------------IHTDLKPENVLLVSSEYIKVP 241
           E  ++L E          DL                   +H DL   NV LV+   +   
Sbjct: 155 ENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNV-LVTHGKV--- 210

Query: 242 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR-----APEVIL 296
                                  +K+ DFG       D NY+V           APE + 
Sbjct: 211 -----------------------VKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLF 247

Query: 297 GLGWTYPCDIWSVGCILVELCT 318
              +T   D+WS G +L E+ +
Sbjct: 248 EGIYTIKSDVWSYGILLWEIFS 269

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 41.4 bits (98), Expect = 3e-04
 Identities = 57/262 (21%), Positives = 93/262 (35%), Gaps = 86/262 (32%)

Query: 97  SRYKIHSKMGEGTFGQVLEC-----WDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQL 150
               +  ++GEG FG+V           + K +VA+K ++      R+    E E+L  L
Sbjct: 15  RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL 74

Query: 151 AKHDK-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSF------- 196
            +H+      G   C          + + +VFE  K G  L  FLR +   +        
Sbjct: 75  -QHEHIVKFYG--VCGD-------GDPLIMVFEYMKHG-DLNKFLRAHGPDAMILVDGQP 123

Query: 197 --------PIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH 248
                      ++  IA Q+   + ++     +H DL   N  LV +  +          
Sbjct: 124 RQAKGELGLSQML-HIASQIASGMVYLASQHFVHRDLATRNC-LVGANLL---------- 171

Query: 249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYR------------APEVIL 296
                           +K+ DFG +   R     + ST +YR             PE I+
Sbjct: 172 ----------------VKIGDFGMS---R----DVYSTDYYRVGGHTMLPIRWMPPESIM 208

Query: 297 GLGWTYPCDIWSVGCILVELCT 318
              +T   D+WS G IL E+ T
Sbjct: 209 YRKFTTESDVWSFGVILWEIFT 230

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 41.6 bits (98), Expect = 4e-04
 Identities = 51/256 (19%), Positives = 92/256 (35%), Gaps = 76/256 (29%)

Query: 100 KIHSKMGEGTFGQVLEC-------WDRERKEMVAIKIVRGIKKYREAA--MIEIEVLQQL 150
            +   +GEG FGQV+            +    VA+K+++     ++ +  + E+E+++ +
Sbjct: 84  TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMI 143

Query: 151 AKHDK-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVRE 203
            KH       G   C Q          + ++ E    G +L ++LR    R   ++   +
Sbjct: 144 GKHKNIINLLG--ACTQ-------DGPLYVIVEYASKG-NLREYLRAR--RPPGMEYSYD 191

Query: 204 IARQLLECIAFMHDLCM----------------IHTDLKPENVLLVSSEYIKVPDYKSSL 247
           I R   E + F   +                  IH DL   NV LV+   +         
Sbjct: 192 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV-LVTENNV--------- 241

Query: 248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTR-----HYRAPEVILGLGWTY 302
                            +K+ DFG          Y  +T       + APE +    +T+
Sbjct: 242 -----------------MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 284

Query: 303 PCDIWSVGCILVELCT 318
             D+WS G ++ E+ T
Sbjct: 285 QSDVWSFGVLMWEIFT 300

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 4e-04
 Identities = 66/488 (13%), Positives = 120/488 (24%), Gaps = 147/488 (30%)

Query: 10  PFSNLDRRPRKRARLGWDVPQVPKAQVGLFCGQEVGNVTSFAPPRAPSDHVTSSSLF--- 66
           P         +R RL  D     K  V                 R         +L    
Sbjct: 105 PSMMTRMYIEQRDRLYNDNQVFAKYNV----------------SRLQPYLKLRQALLELR 148

Query: 67  -VKGVARNGSPPWREDDKDGHYMFALGEN-LTSR----YKIHSKMGEG----TFGQVLEC 116
             K V  +G             +   G+  +       YK+  KM               
Sbjct: 149 PAKNVLIDG-------------VLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNS- 194

Query: 117 WDRERKEMVAIKIVRGIKKYREAA------MIEIEVLQQLAKH---DKGGNRCVQI-RN- 165
                 EM+   + +    +   +       + I  +Q   +     K    C+ +  N 
Sbjct: 195 -PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV 253

Query: 166 W-------FDYRNHIC-IVFEKLGSSLYDFLRKNNYRSFPID-----LVREIARQLLECI 212
                   F+     C I+       + DFL         +D     L  +  + LL   
Sbjct: 254 QNAKAWNAFNLS---CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKY 310

Query: 213 AFMHDLCMIHTDLKPE----NVLLVS--SEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
                L     DL  E    N   +S  +E I+                +K +       
Sbjct: 311 -----LDCRPQDLPREVLTTNPRRLSIIAESIR--------DGLATWDNWKHVNCDKLTT 357

Query: 267 VIDFGSTTYERPDQNYIVSTRHYRA----------PEVILGLGWTYPCDIWSVGCILVEL 316
           +I+  S     P +      + +            P ++L L W        V  ++ +L
Sbjct: 358 IIE-SSLNVLEPAEYR----KMFDRLSVFPPSAHIPTILLSLIWFDVIKS-DVMVVVNKL 411

Query: 317 CTGEALFQTHEN----LEHLAMMERVLGPLPQHMLKRVDRHA---EKYVRRGRLDWPEGA 369
                + +  +     +  + +  +        +      H    + Y      D  +  
Sbjct: 412 HKYSLVEKQPKESTISIPSIYLELK------VKLENEYALHRSIVDHYNIPKTFDSDD-- 463

Query: 370 ASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF---- 425
                    +  P L      H+ H      HL       +  +R+      R  F    
Sbjct: 464 ---------LIPPYLDQYFYSHIGH------HLKNI----EHPERM---TLFRMVFLDFR 501

Query: 426 FTRDHLRR 433
           F    +R 
Sbjct: 502 FLEQKIRH 509

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 41.2 bits (97), Expect = 4e-04
 Identities = 43/267 (16%), Positives = 84/267 (31%), Gaps = 61/267 (22%)

Query: 97  SRYKIHSKMGEGTFGQVLEC---WDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQL 150
            ++ +   +G+G FG V E     +      VA+K+++         E  + E   +++ 
Sbjct: 23  QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82

Query: 151 AKHDK-----GGNRCVQIRNWFDYRNHICIVFE--KLGSSLYDFLRKNNYRSFPIDLVRE 203
             H       G                  ++    K G  L+ FL  +     P +L  +
Sbjct: 83  -DHPHVAKLVG---VSLRSRAKGRLPIPMVILPFMKHG-DLHAFLLASRIGENPFNLPLQ 137

Query: 204 ----IARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRM 259
                   +   + ++     IH DL   N  +++ +                       
Sbjct: 138 TLVRFMVDIACGMEYLSSRNFIHRDLAARNC-MLAEDMT--------------------- 175

Query: 260 PKSSAIKVIDFGSTTYERP--DQNYIVSTRHYR------APEVILGLGWTYPCDIWSVGC 311
                + V DFG +   R     +Y       +      A E +    +T   D+W+ G 
Sbjct: 176 -----VCVADFGLS---RKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGV 227

Query: 312 ILVELCT-GEALFQTHENLEHLAMMER 337
            + E+ T G+  +   EN E    +  
Sbjct: 228 TMWEIMTRGQTPYAGIENAEIYNYLIG 254

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	433
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	100.0
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.95
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.92
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.88
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.76
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.33
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.17
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	99.12
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.08
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.77
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.66
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.56
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.36
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	98.29
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.29
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.05
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.01
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.72
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.64
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.63
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	97.58
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	97.55
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	97.36
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.1
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	97.01
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	96.96
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	96.91
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	96.81
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	96.75
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	96.68
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	96.42
3mes_A	424	Choline kinase; malaria, structural genomics, stru	95.26
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	93.07

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=4.2e-64  Score=477.11  Aligned_cols=251  Identities=26%  Similarity=0.424  Sum_probs=215.1

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++++.||+|+||+||+|+++.+++.||||++.+..    ...+.+.+|+++++.+     +||||++++++|++.++
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~l~~~~~~~~~  106 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-----DHPFFVKLYFTFQDDEK  106 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-----CCTTBCCEEEEEECSSE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEEeCCE
Confidence            56999999999999999999999999999999997432    2345678899999888     78999999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +||||||| ||+|.++|.+.+  .+++.+++.|+.||+.||+|||++|||||||||+|||++.                 
T Consensus       107 ~yivmEy~~gG~L~~~i~~~~--~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~-----------------  167 (311)
T 4aw0_A          107 LYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE-----------------  167 (311)
T ss_dssp             EEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT-----------------
T ss_pred             EEEEEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcC-----------------
Confidence            99999999 999999998765  7999999999999999999999999999999999999954                 


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                                ++.+||+|||+|+.....     ..+.+||+.|||||++.+..|+.++|||||||++|||++|++||.+.
T Consensus       168 ----------~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~  237 (311)
T 4aw0_A          168 ----------DMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG  237 (311)
T ss_dssp             ----------TSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ----------CCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence                      455667777766644322     23468999999999999999999999999999999999999999988


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      +..+.+..+...                       .+.+                          ++.+++++++||.+|
T Consensus       238 ~~~~~~~~i~~~-----------------------~~~~--------------------------p~~~s~~~~dli~~l  268 (311)
T 4aw0_A          238 NEGLIFAKIIKL-----------------------EYDF--------------------------PEKFFPKARDLVEKL  268 (311)
T ss_dssp             SHHHHHHHHHHT-----------------------CCCC--------------------------CTTCCHHHHHHHHHH
T ss_pred             CHHHHHHHHHcC-----------------------CCCC--------------------------CcccCHHHHHHHHHH
Confidence            777666554321                       1122                          235678899999999


Q ss_pred             cccCCCCCCCHHH------HhcCCCCCCCC
Q 013973          407 LRYDPTDRLTARE------ALRHPFFTRDH  430 (433)
Q Consensus       407 L~~dP~~R~ta~e------ll~hp~f~~~~  430 (433)
                      |++||++|||++|      +++||||++-+
T Consensus       269 L~~dp~~R~t~~e~~~~~~i~~Hp~F~~id  298 (311)
T 4aw0_A          269 LVLDATKRLGCEEMEGYGPLKAHPFFESVT  298 (311)
T ss_dssp             SCSSGGGSTTSGGGTCHHHHHTSGGGTTCC
T ss_pred             ccCCHhHCcChHHHcCCHHHHCCCCcCCCC
Confidence            9999999999987      58999998743

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=2.7e-63  Score=478.41  Aligned_cols=253  Identities=27%  Similarity=0.448  Sum_probs=215.5

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ...|+++++||+|+||+||+|+++.+|+.||||+++... ...+.+.+|+.+|+.+     +||||++++++|.+.+.+|
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-----~HpnIV~l~~~~~~~~~~~  147 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-----QHENVVEMYNSYLVGDELW  147 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHC-----CCTTBCCEEEEEEETTEEE
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhC-----CCCCCCcEEEEEEECCEEE
Confidence            356999999999999999999999999999999996432 3345577899999998     7799999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      |||||| ||+|.+++...   .+++.+++.|+.||+.||+|||++|||||||||+||||+.                   
T Consensus       148 ivmEy~~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~-------------------  205 (346)
T 4fih_A          148 VVMEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH-------------------  205 (346)
T ss_dssp             EEECCCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-------------------
T ss_pred             EEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECC-------------------
Confidence            999999 89999999764   6999999999999999999999999999999999999954                   


Q ss_pred             cccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                              ++.+||+|||+|+.....   ....+||+.|||||++.+..|+.++|||||||++|||++|.+||.+.+..+
T Consensus       206 --------~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~  277 (346)
T 4fih_A          206 --------DGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK  277 (346)
T ss_dssp             --------TCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred             --------CCCEEEecCcCceecCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH
Confidence                    456777777776644322   245689999999999999999999999999999999999999999888777


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      .+..+.....+..                                              ..+..+++++++||.+||++|
T Consensus       278 ~~~~i~~~~~~~~----------------------------------------------~~~~~~s~~~~dli~~~L~~d  311 (346)
T 4fih_A          278 AMKMIRDNLPPRL----------------------------------------------KNLHKVSPSLKGFLDRLLVRD  311 (346)
T ss_dssp             HHHHHHHSSCCCC----------------------------------------------SCGGGSCHHHHHHHHHHSCSS
T ss_pred             HHHHHHcCCCCCC----------------------------------------------CccccCCHHHHHHHHHHcCCC
Confidence            6655433211100                                              012356789999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCC
Q 013973          411 PTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       411 P~~R~ta~ell~hp~f~~~  429 (433)
                      |++|||++|+|+||||++.
T Consensus       312 P~~R~ta~e~l~Hp~~~~~  330 (346)
T 4fih_A          312 PAQRATAAELLKHPFLAKA  330 (346)
T ss_dssp             TTTSCCHHHHTTCGGGGGC
T ss_pred             hhHCcCHHHHhcCHhhcCC
Confidence            9999999999999999864

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.8e-63  Score=480.40  Aligned_cols=253  Identities=25%  Similarity=0.402  Sum_probs=212.7

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      ++|++++.||+|+||+||+|+++.+|+.||||+++..   ....+.+.+|+.+++++     +||||+++++++++++.+
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-----~HpnIV~~~~~~~~~~~~   98 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM-----KHPNIVQYRESFEENGSL   98 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEEETTEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHC-----CCCCCCcEEEEEEECCEE
Confidence            5799999999999999999999999999999999643   34456788999999998     779999999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      ||||||| ||+|.++|.......+++..++.|+.||+.||+|||++|||||||||+||||+                   
T Consensus        99 yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~-------------------  159 (350)
T 4b9d_A           99 YIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT-------------------  159 (350)
T ss_dssp             EEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEEC-------------------
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEEC-------------------
Confidence            9999999 99999999877666789999999999999999999999999999999999994                   


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChH
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  329 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~  329 (433)
                              .++.+||+|||+|+......   ...+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+..
T Consensus       160 --------~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~  231 (350)
T 4b9d_A          160 --------KDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK  231 (350)
T ss_dssp             --------TTCCEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             --------CCCCEEEcccccceeecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH
Confidence                    45567777777776544321   3358999999999999999999999999999999999999999988877


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +.+..+....  .|                                              ..+..++.++++||.+||++
T Consensus       232 ~~~~~i~~~~--~~----------------------------------------------~~~~~~s~~~~~li~~~L~~  263 (350)
T 4b9d_A          232 NLVLKIISGS--FP----------------------------------------------PVSLHYSYDLRSLVSQLFKR  263 (350)
T ss_dssp             HHHHHHHHTC--CC----------------------------------------------CCCTTSCHHHHHHHHHHTCS
T ss_pred             HHHHHHHcCC--CC----------------------------------------------CCCccCCHHHHHHHHHHccC
Confidence            7665543311  10                                              01235678999999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCC
Q 013973          410 DPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       410 dP~~R~ta~ell~hp~f~~~  429 (433)
                      ||++|||++|+|+||||++.
T Consensus       264 dP~~R~s~~e~l~hp~~~~~  283 (350)
T 4b9d_A          264 NPRDRPSVNSILEKGFIAKR  283 (350)
T ss_dssp             SGGGSCCHHHHHTSHHHHTT
T ss_pred             ChhHCcCHHHHhcCHHhhcC
Confidence            99999999999999999764

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=3.9e-63  Score=463.98  Aligned_cols=250  Identities=24%  Similarity=0.406  Sum_probs=202.0

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++++.||+|+||+||+|+++.+|+.||||++++..    .....+.+|+.+++.+     +||||+++++++++.+.
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-----~HpnIv~~~~~~~~~~~   87 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-----RHPHIIKLYDVIKSKDE   87 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHC-----CCTTBCCEEEEEECSSE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHC-----CCCCCCeEEEEEEECCE
Confidence            57999999999999999999999999999999996432    2345678899999998     67999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          173 ICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       173 ~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      +||||||++|+|.+++.+.+  .+++.+++.++.||+.||+|||++|||||||||+|||++.                  
T Consensus        88 ~~ivmEy~~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~------------------  147 (275)
T 3hyh_A           88 IIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDE------------------  147 (275)
T ss_dssp             EEEEEECCCEEHHHHHHHSC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECT------------------
T ss_pred             EEEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECC------------------
Confidence            99999999999999998765  7999999999999999999999999999999999999954                  


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCC--CCceeecCcccchhhhhCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCChH
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENL  329 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~Pf~~~~~~  329 (433)
                               ++.+||+|||+|+.....  ..+.+||+.|||||++.+..| +.++|||||||++|||++|+.||.+.+..
T Consensus       148 ---------~~~vkl~DFGla~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~  218 (275)
T 3hyh_A          148 ---------HLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP  218 (275)
T ss_dssp             ---------TCCEEECCSSCC---------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             ---------CCCEEEeecCCCeecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH
Confidence                     455677777776544332  234689999999999999886 58999999999999999999999987766


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +.+..+...                       ...                          .+..+++++++||.+||++
T Consensus       219 ~~~~~i~~~-----------------------~~~--------------------------~p~~~s~~~~~li~~~L~~  249 (275)
T 3hyh_A          219 VLFKNISNG-----------------------VYT--------------------------LPKFLSPGAAGLIKRMLIV  249 (275)
T ss_dssp             HHHHHHHHT-----------------------CCC--------------------------CCTTSCHHHHHHHHHHSCS
T ss_pred             HHHHHHHcC-----------------------CCC--------------------------CCCCCCHHHHHHHHHHccC
Confidence            555443321                       111                          1235678899999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCC
Q 013973          410 DPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       410 dP~~R~ta~ell~hp~f~~~  429 (433)
                      ||++|||++|+|+||||+.+
T Consensus       250 dP~~R~s~~eil~hpw~k~~  269 (275)
T 3hyh_A          250 NPLNRISIHEIMQDDWFKVD  269 (275)
T ss_dssp             SGGGSCCHHHHHHCHHHHTT
T ss_pred             ChhHCcCHHHHHcCcccccC
Confidence            99999999999999999754

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=6.4e-62  Score=480.02  Aligned_cols=253  Identities=27%  Similarity=0.448  Sum_probs=216.4

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      .+.|+++++||+|+||+||+|+++.+|+.||||++.... ...+.+.+|+.+|+.+     +|+||++++++|.+.+.+|
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-----~HpnIV~l~~~~~~~~~~~  224 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-----QHENVVEMYNSYLVGDELW  224 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHC-----CCTTBCCEEEEEEETTEEE
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhC-----CCCCCCceEEEEEECCEEE
Confidence            457999999999999999999999999999999997432 3345678899999998     7799999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      |||||| ||+|.+++...   .+++..++.|+.||+.||+|||++|||||||||+||||+.                   
T Consensus       225 iVmEy~~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~-------------------  282 (423)
T 4fie_A          225 VVMEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH-------------------  282 (423)
T ss_dssp             EEEECCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECT-------------------
T ss_pred             EEEeCCCCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcC-------------------
Confidence            999999 99999999764   5999999999999999999999999999999999999954                   


Q ss_pred             cccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                              ++.+||+|||+|+.....   ....+||+.|||||++.+..|+.++|||||||++|||++|++||.+.+..+
T Consensus       283 --------~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~  354 (423)
T 4fie_A          283 --------DGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK  354 (423)
T ss_dssp             --------TCCEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred             --------CCCEEEecCccceECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH
Confidence                    456777777777644332   245699999999999999999999999999999999999999999888777


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      .+..+.....+..                                              ..+..+++++++||.+||++|
T Consensus       355 ~~~~i~~~~~~~~----------------------------------------------~~~~~~s~~~~dli~~~L~~d  388 (423)
T 4fie_A          355 AMKMIRDNLPPRL----------------------------------------------KNLHKVSPSLKGFLDRLLVRD  388 (423)
T ss_dssp             HHHHHHHSCCCCC----------------------------------------------SCTTSSCHHHHHHHHHHSCSS
T ss_pred             HHHHHHcCCCCCC----------------------------------------------cccccCCHHHHHHHHHHcCCC
Confidence            6655433211100                                              112356789999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCC
Q 013973          411 PTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       411 P~~R~ta~ell~hp~f~~~  429 (433)
                      |++|||++|+|+||||++.
T Consensus       389 P~~R~ta~ell~Hp~~~~~  407 (423)
T 4fie_A          389 PAQRATAAELLKHPFLAKA  407 (423)
T ss_dssp             TTTSCCHHHHTTCGGGGGC
T ss_pred             hhHCcCHHHHhcCHHhcCC
Confidence            9999999999999999864

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=2.7e-61  Score=455.35  Aligned_cols=253  Identities=23%  Similarity=0.425  Sum_probs=206.5

Q ss_pred             CcE-EEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec---
Q 013973           97 SRY-KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY---  169 (433)
Q Consensus        97 ~~~-~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~---  169 (433)
                      ++| ++.++||+|+||+||+|.++.+++.||+|++...   ....+.+.+|+.+++++     +|||||+++++|++   
T Consensus        25 gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-----~HpnIV~~~~~~~~~~~   99 (290)
T 3fpq_A           25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-----QHPNIVRFYDSWESTVK   99 (290)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEEEEEET
T ss_pred             CceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhC-----CCCCCCcEEEEEeeccC
Confidence            445 7888999999999999999999999999999642   33456678899999988     78999999999865   


Q ss_pred             -CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCceEeeccCccccCCCcC
Q 013973          170 -RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC--MIHTDLKPENVLLVSSEYIKVPDYKS  245 (433)
Q Consensus       170 -~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlKp~NILl~~~~~~~i~dfg~  245 (433)
                       .+.+||||||| ||+|.++|.+.+  .+++..++.|+.||+.||+|||++|  ||||||||+||||+.           
T Consensus       100 ~~~~~~lvmEy~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~-----------  166 (290)
T 3fpq_A          100 GKKCIVLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG-----------  166 (290)
T ss_dssp             TEEEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESS-----------
T ss_pred             CCcEEEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEEC-----------
Confidence             46799999999 999999998765  7999999999999999999999999  999999999999952           


Q ss_pred             CCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 013973          246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                                     .++.+||+|||+|+...... ...+||+.|||||++.+ .|+.++|||||||++|||+||+.||.
T Consensus       167 ---------------~~g~vKl~DFGla~~~~~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~  230 (290)
T 3fpq_A          167 ---------------PTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYS  230 (290)
T ss_dssp             ---------------TTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             ---------------CCCCEEEEeCcCCEeCCCCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence                           34567888888776543332 34689999999999875 69999999999999999999999998


Q ss_pred             CCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHH
Q 013973          325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  404 (433)
Q Consensus       325 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  404 (433)
                      +.+....+...... +..|                                             ...+...++++++||.
T Consensus       231 ~~~~~~~~~~~i~~-~~~~---------------------------------------------~~~~~~~~~~~~~li~  264 (290)
T 3fpq_A          231 ECQNAAQIYRRVTS-GVKP---------------------------------------------ASFDKVAIPEVKEIIE  264 (290)
T ss_dssp             TCSSHHHHHHHHTT-TCCC---------------------------------------------GGGGGCCCHHHHHHHH
T ss_pred             CCCcHHHHHHHHHc-CCCC---------------------------------------------CCCCccCCHHHHHHHH
Confidence            76554433221100 0000                                             0112355678999999


Q ss_pred             hccccCCCCCCCHHHHhcCCCCCCC
Q 013973          405 GLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       405 ~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      +||++||++|||++|+|+||||+++
T Consensus       265 ~~L~~dP~~R~s~~e~l~Hp~~~~~  289 (290)
T 3fpq_A          265 GCIRQNKDERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             HHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred             HHccCChhHCcCHHHHhcCccccCC
Confidence            9999999999999999999999874

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=4.4e-62  Score=463.04  Aligned_cols=250  Identities=27%  Similarity=0.458  Sum_probs=207.3

Q ss_pred             CcEEEEeeeeccccEEEEEEEEC---CCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDR---ERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~---~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      ++|++++.||+|+||+||+|++.   .+++.||||++++..   .....+..|+.+++++     +||||++++++++++
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~l~~~~~~~   98 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV-----NHPFIVKLHYAFQTE   98 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCC-----CCTTEECEEEEEEET
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHC-----CCCCCCeEEEEEEEC
Confidence            57999999999999999999874   568899999996432   2233566788888777     789999999999999


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      +.+||||||| ||+|.++|.+.+  .+++.+++.|+.||+.||+|||++|||||||||+|||++                
T Consensus        99 ~~~~ivmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~----------------  160 (304)
T 3ubd_A           99 GKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD----------------  160 (304)
T ss_dssp             TEEEEEECCCTTCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC----------------
T ss_pred             CEEEEEEEcCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEc----------------
Confidence            9999999999 999999998865  799999999999999999999999999999999999994                


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCC---CCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                                 .++.+||+|||+|+....   .....+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.
T Consensus       161 -----------~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~  229 (304)
T 3ubd_A          161 -----------EEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK  229 (304)
T ss_dssp             -----------TTSCEEEESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             -----------CCCCEEecccccceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc
Confidence                       455677777777764322   224568999999999999999999999999999999999999999988


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      +..+.+..+....                       +.                          .+..+|+++++||.+|
T Consensus       230 ~~~~~~~~i~~~~-----------------------~~--------------------------~p~~~s~~~~~li~~~  260 (304)
T 3ubd_A          230 DRKETMTMILKAK-----------------------LG--------------------------MPQFLSPEAQSLLRML  260 (304)
T ss_dssp             SHHHHHHHHHHCC-----------------------CC--------------------------CCTTSCHHHHHHHHHH
T ss_pred             CHHHHHHHHHcCC-----------------------CC--------------------------CCCcCCHHHHHHHHHH
Confidence            8777665543311                       11                          1235678999999999


Q ss_pred             cccCCCCCCC-----HHHHhcCCCCCCC
Q 013973          407 LRYDPTDRLT-----AREALRHPFFTRD  429 (433)
Q Consensus       407 L~~dP~~R~t-----a~ell~hp~f~~~  429 (433)
                      |++||++|||     ++|+++||||++-
T Consensus       261 L~~dP~~R~ta~~~~~~eil~Hp~f~~i  288 (304)
T 3ubd_A          261 FKRNPANRLGAGPDGVEEIKRHSFFSTI  288 (304)
T ss_dssp             TCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred             cccCHHHCCCCCcCCHHHHHcCccccCC
Confidence            9999999998     5799999999864

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.2e-60  Score=471.13  Aligned_cols=282  Identities=27%  Similarity=0.471  Sum_probs=223.6

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec--
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY--  169 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~--  169 (433)
                      +.++|++++.||+|+||+||+|+++.+|+.||||+++..   ....+.+.+|+.+|+.+     .||||+++++++..  
T Consensus        52 i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-----~HpnIv~l~~~~~~~~  126 (398)
T 4b99_A           52 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHF-----KHDNIIAIKDILRPTV  126 (398)
T ss_dssp             CCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHC-----CCTTBCCEEEECCCSS
T ss_pred             CCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhc-----CCCCcceEeeeeeccc
Confidence            446899999999999999999999999999999999643   23345677899999998     67999999988653  


Q ss_pred             ----CCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcC
Q 013973          170 ----RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  245 (433)
Q Consensus       170 ----~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~  245 (433)
                          .+++|||||||+|+|.+++...+  .+++..++.|+.||+.||+|||++|||||||||+|||++.+|.        
T Consensus       127 ~~~~~~~~~ivmE~~~g~L~~~i~~~~--~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~--------  196 (398)
T 4b99_A          127 PYGEFKSVYVVLDLMESDLHQIIHSSQ--PLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCE--------  196 (398)
T ss_dssp             CTTTCCCEEEEEECCSEEHHHHHTSSS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCC--------
T ss_pred             ccccCCEEEEEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCC--------
Confidence                47899999999889999998754  8999999999999999999999999999999999999965554        


Q ss_pred             CCCCCCCCcccccCCCCCCEEEEecCCccccCC-------CCCceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHH
Q 013973          246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP-------DQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELC  317 (433)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-------~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~ell  317 (433)
                                         +||+|||+|+....       .....+||+.|||||++.+. .|+.++||||+||++|||+
T Consensus       197 -------------------~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell  257 (398)
T 4b99_A          197 -------------------LKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEML  257 (398)
T ss_dssp             -------------------EEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHH
T ss_pred             -------------------EEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHH
Confidence                               55555555543211       12346899999999999886 4699999999999999999


Q ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhh-hhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCch
Q 013973          318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAE-KYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA  396 (433)
Q Consensus       318 tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (433)
                      +|++||.+.+..+++..|....|.++...+..+..... .++..    .+...               ........+..+
T Consensus       258 ~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~----~~~~~---------------~~~~~~~~~~~s  318 (398)
T 4b99_A          258 ARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQS----LPPRQ---------------PVPWETVYPGAD  318 (398)
T ss_dssp             HTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHS----SCCCC---------------CCCHHHHSTTCC
T ss_pred             HCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhc----CCCcC---------------CCCHHHhCCCCC
Confidence            99999999999999999999999888654433221111 11110    00000               000111234678


Q ss_pred             hHHHHHHHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          397 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       397 ~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      +++.|||.+||++||++||||+|+|+||||++-
T Consensus       319 ~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  351 (398)
T 4b99_A          319 RQALSLLGRMLRFEPSARISAAAALRHPFLAKY  351 (398)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTT
T ss_pred             HHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcC
Confidence            899999999999999999999999999999864

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=9.6e-61  Score=459.25  Aligned_cols=251  Identities=27%  Similarity=0.354  Sum_probs=207.6

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  176 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV  176 (433)
                      +.|++.++||+|+||+||+|+++.+|+.||||+++....    ..+|+.+++.+     +|||||++++++.+.+.+|||
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l-----~HpnIV~l~~~~~~~~~~~iv  128 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGL-----SSPRIVPLYGAVREGPWVNIF  128 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTC-----CCTTBCCEEEEEEETTEEEEE
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhC-----CCCCCCcEEEEEEECCEEEEE
Confidence            569999999999999999999999999999999975322    23588888877     789999999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          177 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       177 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      |||| ||+|.++|.+.+  .+++..++.|+.||+.||+|||++|||||||||+||||+.+|                   
T Consensus       129 mEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g-------------------  187 (336)
T 4g3f_A          129 MELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDG-------------------  187 (336)
T ss_dssp             ECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTS-------------------
T ss_pred             EeccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCC-------------------
Confidence            9999 999999998765  799999999999999999999999999999999999996544                   


Q ss_pred             cccCCCCCCEEEEecCCccccCCC--------CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          256 FKRMPKSSAIKVIDFGSTTYERPD--------QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                             ..+||+|||+|+.....        ....+||+.|||||++.+..|+.++|||||||++|||++|++||.+.+
T Consensus       188 -------~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~  260 (336)
T 4g3f_A          188 -------SRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF  260 (336)
T ss_dssp             -------CCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTC
T ss_pred             -------CEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence                   13666666666543321        123589999999999999999999999999999999999999998765


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ..+.+..+...  +.+                                            ....++.+++++.+||.+||
T Consensus       261 ~~~~~~~i~~~--~~~--------------------------------------------~~~~~~~~s~~~~~li~~~L  294 (336)
T 4g3f_A          261 RGPLCLKIASE--PPP--------------------------------------------IREIPPSCAPLTAQAIQEGL  294 (336)
T ss_dssp             CSCCHHHHHHS--CCG--------------------------------------------GGGSCTTSCHHHHHHHHHHT
T ss_pred             HHHHHHHHHcC--CCC--------------------------------------------chhcCccCCHHHHHHHHHHc
Confidence            54433332211  000                                            01234567889999999999


Q ss_pred             ccCCCCCCCHHHH-------------hcCCCCCCCC
Q 013973          408 RYDPTDRLTAREA-------------LRHPFFTRDH  430 (433)
Q Consensus       408 ~~dP~~R~ta~el-------------l~hp~f~~~~  430 (433)
                      ++||++|||+.|+             |+|||+++-.
T Consensus       295 ~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~  330 (336)
T 4g3f_A          295 RKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYK  330 (336)
T ss_dssp             CSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCC
T ss_pred             cCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCC
Confidence            9999999999997             6899998654

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=2.4e-58  Score=449.90  Aligned_cols=321  Identities=23%  Similarity=0.357  Sum_probs=222.2

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEEC---CCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDR---ERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~---~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      .+.++|++.++||+|+||+||+|+++   .+++.||||.+.... ......+|+++|+.+.    +|+||++++++|++.
T Consensus        18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~----~h~nIv~l~~~~~~~   92 (361)
T 4f9c_A           18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAG----GQDNVMGVKYCFRKN   92 (361)
T ss_dssp             GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTC----SBTTBCCCSEEEEET
T ss_pred             CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhc----CCCCCceEEEEEEEC
Confidence            35678999999999999999999875   467899999986533 3455778999888773    468899999999999


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeecc-CccccCCCcCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSS-EYIKVPDYKSSLH  248 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~-~~~~i~dfg~~~~  248 (433)
                      +++||||||+ |++|.+++.     .+++.+++.|+.||+.||+|||++|||||||||+|||++.+ +.+||+|||+|..
T Consensus        93 ~~~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~  167 (361)
T 4f9c_A           93 DHVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQG  167 (361)
T ss_dssp             TEEEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             CEEEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcc
Confidence            9999999999 899999983     59999999999999999999999999999999999999876 7888888888865


Q ss_pred             CCCCCcccccC-C-CCCCEEEEecCCcc--ccCCCCCceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCC
Q 013973          249 TPKDSSYFKRM-P-KSSAIKVIDFGSTT--YERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALF  323 (433)
Q Consensus       249 ~~~~~~~~~~~-~-~~~~~kl~Dfg~a~--~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf  323 (433)
                      ........... . ........+-....  .........+||+.|||||++.+. .|+.++||||+||++|||++|+.||
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf  247 (361)
T 4f9c_A          168 THDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF  247 (361)
T ss_dssp             CTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred             cCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCC
Confidence            43321110000 0 00000000000000  001112345899999999999876 4899999999999999999999999


Q ss_pred             C-CCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhcc-----ch------hHHHHHhhh
Q 013973          324 Q-THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK-----LP------RLQNLIMQH  391 (433)
Q Consensus       324 ~-~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~------~~~~~~~~~  391 (433)
                      . +.++.+++..|...+|..+.......  .........  ..|...  .........     .+      .........
T Consensus       248 ~~~~~~~~~l~~I~~~~G~~~~~~~~~~--~~~~~~~~~--~~p~~~--~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  321 (361)
T 4f9c_A          248 YKASDDLTALAQIMTIRGSRETIQAAKT--FGKSILCSK--EVPAQD--LRKLCERLRGMDSSTPKLTSDIQGHATNLEG  321 (361)
T ss_dssp             SCCSSHHHHHHHHHHHHCHHHHHHHHHH--TTEEEEESS--CCCCCC--HHHHHHHHC----------------------
T ss_pred             CCCCCHHHHHHHHHHhcCCccchhhhhh--ccccccccc--cCcchh--hhHHHHhhccccccccccccccccccccccc
Confidence            4 56677889999998886433221111  000000000  011000  000000000     00      000111233


Q ss_pred             cCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          392 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       392 ~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      +...+++++|||.+||++||++|+||+|+|+||||++-.
T Consensus       322 ~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i~  360 (361)
T 4f9c_A          322 WNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDMS  360 (361)
T ss_dssp             CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC-
T ss_pred             cccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCC
Confidence            567789999999999999999999999999999999865

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=2.1e-57  Score=432.07  Aligned_cols=266  Identities=24%  Similarity=0.305  Sum_probs=193.4

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC---
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN---  171 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~---  171 (433)
                      ++|++++.||+|+||+||+|+++.+|+.||||+++..  ....+.+.+|+.+++++     +||||++++++|.+.+   
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l-----~HpnIV~~~~~~~~~~~~~   79 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-----EHPGIVRYFNAWLEKNTTE   79 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEEEEEC---
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEEecCccc
Confidence            5699999999999999999999999999999998632  33456678899999888     7899999999986543   


Q ss_pred             ---------eEEEEEecC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCcccc
Q 013973          172 ---------HICIVFEKL-GSSLYDFLRKNNY-RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKV  240 (433)
Q Consensus       172 ---------~~~lV~e~~-~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i  240 (433)
                               ++||||||| ||+|.+++..... ...++..++.|+.||+.||+|||++|||||||||+|||++.+|.+||
T Consensus        80 ~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl  159 (299)
T 4g31_A           80 KLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKV  159 (299)
T ss_dssp             -------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEE
T ss_pred             cccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEE
Confidence                     479999999 9999999987542 22456678999999999999999999999999999999987777777


Q ss_pred             CCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCC
Q 013973          241 PDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE  320 (433)
Q Consensus       241 ~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~  320 (433)
                      +|||+|.....+....+        ....    ..........+||+.|||||++.+..|+.++|||||||++|||++  
T Consensus       160 ~DFGla~~~~~~~~~~~--------~~~~----~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~--  225 (299)
T 4g31_A          160 GDFGLVTAMDQDEEEQT--------VLTP----MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY--  225 (299)
T ss_dssp             CCCCCC--------------------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS--
T ss_pred             ccCccceecCCCccccc--------cccc----cccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc--
Confidence            77776654432211000        0000    000001133589999999999999999999999999999999996  


Q ss_pred             CCCCCCChHHHHHHHHHHh-CCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHH
Q 013973          321 ALFQTHENLEHLAMMERVL-GPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL  399 (433)
Q Consensus       321 ~Pf~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (433)
                       ||.+.  .+....+.... +..|+.                                              +...++.+
T Consensus       226 -Pf~~~--~~~~~~~~~~~~~~~p~~----------------------------------------------~~~~~~~~  256 (299)
T 4g31_A          226 -PFSTQ--MERVRTLTDVRNLKFPPL----------------------------------------------FTQKYPCE  256 (299)
T ss_dssp             -CCSSH--HHHHHHHHHHHTTCCCHH----------------------------------------------HHHHCHHH
T ss_pred             -CCCCc--cHHHHHHHHHhcCCCCCC----------------------------------------------CcccCHHH
Confidence             88642  22222222211 111111                                              11224567


Q ss_pred             HHHHHhccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          400 THLLQGLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       400 ~~li~~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      .+||.+||++||++|||+.|+|+||||++.+
T Consensus       257 ~~li~~~L~~dP~~Rps~~eil~h~~~~~~~  287 (299)
T 4g31_A          257 YVMVQDMLSPSPMERPEAINIIENAVFEDLD  287 (299)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHTSGGGCCC-
T ss_pred             HHHHHHHcCCChhHCcCHHHHhcCHhhCCCC
Confidence            8899999999999999999999999998753

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=3.6e-57  Score=465.69  Aligned_cols=257  Identities=25%  Similarity=0.399  Sum_probs=206.3

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .++|++++.||+|+||+||+|+++.+|+.||||++++..    ........|..++..+..  .+||||++++++|++.+
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~--~~HP~IV~l~~~f~~~~  265 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST--GDCPFIVCMSYAFHTPD  265 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSS--SCCTTBCCEEEEEECSS
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhh--CCCCCEeEEEEEEEECC
Confidence            467999999999999999999999999999999997432    122334455555554432  37899999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+||||||| ||+|.++|.+.+  .|++..++.|+.||+.||+|||++|||||||||+||||+.+               
T Consensus       266 ~lylVmEy~~GGdL~~~l~~~~--~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~---------------  328 (689)
T 3v5w_A          266 KLSFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEH---------------  328 (689)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTT---------------
T ss_pred             EEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCC---------------
Confidence            999999999 999999998865  79999999999999999999999999999999999999544               


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCC-CCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPD-QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                                  +.+||+|||+|+..... ..+.+||+.|||||++.. ..|+.++|||||||++|||++|.+||.+.+.
T Consensus       329 ------------G~vKL~DFGlA~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~  396 (689)
T 3v5w_A          329 ------------GHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT  396 (689)
T ss_dssp             ------------SCEEECCCTTCEECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGC
T ss_pred             ------------CCEEecccceeeecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence                        45666666666543332 345699999999999974 6799999999999999999999999976432


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      .+........                    .....                          .++..+++++++||.+||+
T Consensus       397 ~~~~~i~~~i--------------------~~~~~--------------------------~~p~~~S~~a~dLI~~lL~  430 (689)
T 3v5w_A          397 KDKHEIDRMT--------------------LTMAV--------------------------ELPDSFSPELRSLLEGLLQ  430 (689)
T ss_dssp             CCHHHHHHHH--------------------HHCCC--------------------------CCCTTSCHHHHHHHHHHTC
T ss_pred             HHHHHHHHhh--------------------cCCCC--------------------------CCCccCCHHHHHHHHHHcc
Confidence            2211111110                    01111                          1234678899999999999


Q ss_pred             cCCCCCCC-----HHHHhcCCCCCCC
Q 013973          409 YDPTDRLT-----AREALRHPFFTRD  429 (433)
Q Consensus       409 ~dP~~R~t-----a~ell~hp~f~~~  429 (433)
                      +||.+|++     ++||++||||++-
T Consensus       431 ~dP~~Rl~~~~~ga~ei~~HpfF~~i  456 (689)
T 3v5w_A          431 RDVNRRLGCLGRGAQEVKESPFFRSL  456 (689)
T ss_dssp             SCGGGCTTCSSSTHHHHTTSGGGTTC
T ss_pred             CCHhHCCCCCCCCHHHHhcCccccCC
Confidence            99999998     8999999999874

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=6.5e-57  Score=465.17  Aligned_cols=261  Identities=28%  Similarity=0.453  Sum_probs=223.5

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      .+.++|++++.||+|+||+||+|+++.+|+.||+|++... ....+.+.+|+.+|+.+     +||||++++++|++.+.
T Consensus       154 ~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l-----~hpnIv~l~~~~~~~~~  228 (573)
T 3uto_A          154 HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL-----RHPTLVNLHDAFEDDNE  228 (573)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHT-----CCTTBCCEEEEEECSSE
T ss_pred             cCccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhC-----CCCCCCeEEEEEEECCE
Confidence            3457899999999999999999999999999999998743 33456678899999998     67999999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +||||||| ||+|.++|.... ..|++.+++.|+.||+.||+|||++|||||||||+|||++.                 
T Consensus       229 ~~iv~E~~~gg~L~~~i~~~~-~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~-----------------  290 (573)
T 3uto_A          229 MVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT-----------------  290 (573)
T ss_dssp             EEEEEECCCCCBHHHHHTCTT-SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-----------------
T ss_pred             EEEEEeecCCCcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccC-----------------
Confidence            99999999 999999997543 37999999999999999999999999999999999999954                 


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChH
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  329 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~  329 (433)
                              +..+.+||+|||+++......  ...+||+.|||||++.+..|+.++|||||||++|||++|.+||.+.+..
T Consensus       291 --------~~~~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~  362 (573)
T 3uto_A          291 --------KRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD  362 (573)
T ss_dssp             --------SSCCCEEECCCSSCEECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH
T ss_pred             --------CCCCCEEEeeccceeEccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH
Confidence                    234678888888887665443  3468999999999999999999999999999999999999999998887


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +.+..+......++.                                             ..+..++.++++||.+||++
T Consensus       363 ~~~~~i~~~~~~~~~---------------------------------------------~~~~~~s~~~~dli~~~L~~  397 (573)
T 3uto_A          363 ETLRNVKSCDWNMDD---------------------------------------------SAFSGISEDGKDFIRKLLLA  397 (573)
T ss_dssp             HHHHHHHTTCCCCCS---------------------------------------------GGGTTSCHHHHHHHHTTSCS
T ss_pred             HHHHHHHhCCCCCCc---------------------------------------------ccccCCCHHHHHHHHHHccC
Confidence            776655432222111                                             11245688999999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCC
Q 013973          410 DPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       410 dP~~R~ta~ell~hp~f~~~~  430 (433)
                      ||.+|||+.|+|+||||+..+
T Consensus       398 dp~~R~t~~e~l~Hpw~~~~~  418 (573)
T 3uto_A          398 DPNTRMTIHQALEHPWLTPGN  418 (573)
T ss_dssp             SGGGSCCHHHHHHSTTTSCCC
T ss_pred             ChhHCcCHHHHhcCcCcCCCC
Confidence            999999999999999998654

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=1.7e-56  Score=425.32  Aligned_cols=246  Identities=22%  Similarity=0.330  Sum_probs=202.2

Q ss_pred             cCcEEEEeeeeccccEEEEEEEEC-----CCCeEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~-----~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      .++|.+.++||+|+||+||+|++.     .++..||||+++.. ....+.+.+|+++++++     +||||+++++++.+
T Consensus        12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l-----~HpnIV~l~g~~~~   86 (299)
T 4asz_A           12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-----QHEHIVKFYGVCVE   86 (299)
T ss_dssp             GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEECS
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhC-----CCCCCccEEEEEee
Confidence            367999999999999999999875     46789999999743 34456788999999988     78999999999999


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcC-----------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCc
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNN-----------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEY  237 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~-----------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~  237 (433)
                      .+.+||||||| +|+|.++|+..+           ...+++.++..|+.||+.||+|||+++||||||||+|||++++  
T Consensus        87 ~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~--  164 (299)
T 4asz_A           87 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGEN--  164 (299)
T ss_dssp             SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG--
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCC--
Confidence            99999999999 999999998642           3469999999999999999999999999999999999999554  


Q ss_pred             cccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHHHH
Q 013973          238 IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCI  312 (433)
Q Consensus       238 ~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~  312 (433)
                                               +.+||+|||+|+......     ...+||+.|||||++.+..|+.++|||||||+
T Consensus       165 -------------------------~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvv  219 (299)
T 4asz_A          165 -------------------------LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVV  219 (299)
T ss_dssp             -------------------------GCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             -------------------------CcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHH
Confidence                                     456666666665332221     23479999999999999999999999999999


Q ss_pred             HHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhh
Q 013973          313 LVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH  391 (433)
Q Consensus       313 l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (433)
                      +|||+| |+.||.+.+..+....+...  .                    ..                          ..
T Consensus       220 l~Ellt~G~~Pf~~~~~~~~~~~i~~~--~--------------------~~--------------------------~~  251 (299)
T 4asz_A          220 LWEIFTYGKQPWYQLSNNEVIECITQG--R--------------------VL--------------------------QR  251 (299)
T ss_dssp             HHHHHTTTCCTTTTSCHHHHHHHHHHT--C--------------------CC--------------------------CC
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHcC--C--------------------CC--------------------------CC
Confidence            999999 89999988776655543321  0                    00                          12


Q ss_pred             cCCchhHHHHHHHhccccCCCCCCCHHHHh
Q 013973          392 VDHSAGDLTHLLQGLLRYDPTDRLTAREAL  421 (433)
Q Consensus       392 ~~~~~~~~~~li~~~L~~dP~~R~ta~ell  421 (433)
                      +..++.++.+||.+||+.||++|||+.||+
T Consensus       252 p~~~~~~~~~li~~cl~~dP~~RPs~~~i~  281 (299)
T 4asz_A          252 PRTCPQEVYELMLGCWQREPHMRKNIKGIH  281 (299)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CccchHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            345678999999999999999999999984

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=5.9e-56  Score=427.17  Aligned_cols=248  Identities=22%  Similarity=0.339  Sum_probs=200.4

Q ss_pred             cCcEEEEeeeeccccEEEEEEEEC-----CCCeEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~-----~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      .++|.+.++||+|+||+||+|+.+     .+++.||||+++.. ....+.+.+|+++++++     .|||||++++++.+
T Consensus        40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l-----~HpnIV~l~g~~~~  114 (329)
T 4aoj_A           40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML-----QHQHIVRFFGVCTE  114 (329)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEECS
T ss_pred             HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhC-----CCCCCCcEEEEEEE
Confidence            367999999999999999999865     46889999999743 34556788999999988     78999999999999


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcC-------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeecc
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNN-------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSS  235 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~-------------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~  235 (433)
                      .+.+||||||| +|+|.++|+...             ..++++.++..|+.||+.||+|||+++||||||||+|||++++
T Consensus       115 ~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~  194 (329)
T 4aoj_A          115 GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQG  194 (329)
T ss_dssp             SSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETT
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCC
Confidence            99999999999 999999998643             1369999999999999999999999999999999999999665


Q ss_pred             CccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhCCCCCCcchhHHHH
Q 013973          236 EYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYPCDIWSVG  310 (433)
Q Consensus       236 ~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG  310 (433)
                      +.+                           ||+|||+++.....     ....+||+.|||||++.+..|+.++||||||
T Consensus       195 ~~~---------------------------Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~G  247 (329)
T 4aoj_A          195 LVV---------------------------KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFG  247 (329)
T ss_dssp             TEE---------------------------EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHH
T ss_pred             CcE---------------------------EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchH
Confidence            554                           55555554432211     1234799999999999999999999999999


Q ss_pred             HHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHh
Q 013973          311 CILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM  389 (433)
Q Consensus       311 v~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (433)
                      |++|||+| |+.||.+.+..+.+..+....                      .+.                         
T Consensus       248 vvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~----------------------~~~-------------------------  280 (329)
T 4aoj_A          248 VVLWEIFTYGKQPWYQLSNTEAIDCITQGR----------------------ELE-------------------------  280 (329)
T ss_dssp             HHHHHHHTTSCCTTCSSCHHHHHHHHHHTC----------------------CCC-------------------------
T ss_pred             HHHHHHHcCCCCCCCCCCHHHHHHHHHcCC----------------------CCC-------------------------
Confidence            99999999 899999887766554433210                      011                         


Q ss_pred             hhcCCchhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          390 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       390 ~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                       .+..+++++.+||.+||+.||++|||+.||+++
T Consensus       281 -~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          281 -RPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             -CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             -CcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence             234567899999999999999999999999764

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=5.3e-56  Score=422.19  Aligned_cols=252  Identities=24%  Similarity=0.347  Sum_probs=196.4

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeec---chhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG---IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      .+++++.++||+|+||+||+|+++.   .||||+++.   .....+.+.+|+.+++++     +||||+++++++.. +.
T Consensus        35 ~~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l-----~HpNIV~l~g~~~~-~~  105 (307)
T 3omv_A           35 ASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKT-----RHVNILLFMGYMTK-DN  105 (307)
T ss_dssp             TTSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEECS-SS
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEEC-Ce
Confidence            4678999999999999999998653   499999863   234456788899999988     78999999998754 56


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +||||||| ||+|.++|.... ..+++..+..|+.||+.||+|||+++||||||||+||||++++.+|            
T Consensus       106 ~~iVmEy~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~K------------  172 (307)
T 3omv_A          106 LAIVTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVK------------  172 (307)
T ss_dssp             CEEEEECCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEE------------
T ss_pred             EEEEEEcCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEE------------
Confidence            89999999 999999998654 4799999999999999999999999999999999999997655555            


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCC-----CCCceeecCcccchhhhhCC---CCCCcchhHHHHHHHHHHHhCCCCC
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERP-----DQNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALF  323 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlGv~l~elltg~~Pf  323 (433)
                                     |+|||+|+....     .....+||+.|||||++.+.   .|+.++|||||||++|||+||+.||
T Consensus       173 ---------------i~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf  237 (307)
T 3omv_A          173 ---------------IGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY  237 (307)
T ss_dssp             ---------------ECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ---------------EeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCC
Confidence                           555555443221     11335899999999999753   5899999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      .+.+....+..+.......|                       .                    ....+..++.++.+||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~p-----------------------~--------------------~~~~~~~~~~~l~~li  274 (307)
T 3omv_A          238 SHINNRDQIIFMVGRGYASP-----------------------D--------------------LSKLYKNCPKAMKRLV  274 (307)
T ss_dssp             TTCCCHHHHHHHHHTTCCCC-----------------------C--------------------STTSCTTSCHHHHHHH
T ss_pred             CCCChHHHHHHHHhcCCCCC-----------------------C--------------------cccccccchHHHHHHH
Confidence            88766554433222111100                       0                    0112346778999999


Q ss_pred             HhccccCCCCCCCHHHH------hcCCCCC
Q 013973          404 QGLLRYDPTDRLTAREA------LRHPFFT  427 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~el------l~hp~f~  427 (433)
                      .+||+.||++|||+.||      |+|++.+
T Consensus       275 ~~cl~~dP~~RPs~~ei~~~Le~l~~~lpk  304 (307)
T 3omv_A          275 ADCVKKVKEERPLFPQILSSIELLQHSLPK  304 (307)
T ss_dssp             HHHTCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred             HHHcCCCHhHCcCHHHHHHHHHHHhccCCC
Confidence            99999999999999865      6777754

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=7.4e-56  Score=422.63  Aligned_cols=248  Identities=20%  Similarity=0.246  Sum_probs=202.5

Q ss_pred             cCcEEEEeeeeccccEEEEEEEEC-----CCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~-----~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      .++++++++||+|+||+||+|...     .+++.||||+++..  ....+.+.+|+.+++++     .||||+++++++.
T Consensus        25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l-----~HpNIV~l~g~~~   99 (308)
T 4gt4_A           25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL-----QHPNVVCLLGVVT   99 (308)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHC-----CCTTBCCEEEEEC
T ss_pred             HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhC-----CCCCCCCcceEEE
Confidence            456899999999999999999863     46789999999642  23456788999999998     7899999999999


Q ss_pred             cCCeEEEEEecC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEee
Q 013973          169 YRNHICIVFEKL-GSSLYDFLRKNN--------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV  233 (433)
Q Consensus       169 ~~~~~~lV~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~  233 (433)
                      +.+.+||||||| +|+|.++|....              ...+++..+..|+.||+.||+|||+++||||||||+||||+
T Consensus       100 ~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~  179 (308)
T 4gt4_A          100 KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVY  179 (308)
T ss_dssp             SSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred             ECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEC
Confidence            999999999999 999999997532              13589999999999999999999999999999999999996


Q ss_pred             ccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhCCCCCCcchhHH
Q 013973          234 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYPCDIWS  308 (433)
Q Consensus       234 ~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwS  308 (433)
                      +++                           .+||+|||+++.....     ....+||+.|||||++.+..|+.++||||
T Consensus       180 ~~~---------------------------~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwS  232 (308)
T 4gt4_A          180 DKL---------------------------NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWS  232 (308)
T ss_dssp             GGG---------------------------CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHH
T ss_pred             CCC---------------------------CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhh
Confidence            555                           4555555555432211     13357999999999999999999999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHH
Q 013973          309 VGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL  387 (433)
Q Consensus       309 lGv~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (433)
                      |||++|||+| |..||.+.+..+....+...  .                    ...                       
T Consensus       233 fGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~--~--------------------~~~-----------------------  267 (308)
T 4gt4_A          233 YGVVLWEVFSYGLQPYCGYSNQDVVEMIRNR--Q--------------------VLP-----------------------  267 (308)
T ss_dssp             HHHHHHHHHTTTCCTTTTCCHHHHHHHHHTT--C--------------------CCC-----------------------
T ss_pred             HHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC--C--------------------CCC-----------------------
Confidence            9999999998 89999988776655443211  0                    011                       


Q ss_pred             HhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       388 ~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                         .++.++.++.+|+.+||+.||++|||+.||+++
T Consensus       268 ---~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          268 ---CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             ---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---CcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence               234667889999999999999999999999875

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=6.4e-54  Score=419.90  Aligned_cols=339  Identities=39%  Similarity=0.683  Sum_probs=264.8

Q ss_pred             CCCCCCceeecCceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCce
Q 013973           81 DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRC  160 (433)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i  160 (433)
                      ++....+.+..+..+.++|+++++||+|+||.||+|++..+++.||||+++...........|+.+++.+.+....|+||
T Consensus        19 ~~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~i   98 (360)
T 3llt_A           19 DDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNI   98 (360)
T ss_dssp             -CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGB
T ss_pred             CccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCe
Confidence            33445667788889999999999999999999999999999999999999876666777788999999997666678999


Q ss_pred             EEecceeecCCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCcccc
Q 013973          161 VQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKV  240 (433)
Q Consensus       161 ~~~~~~~~~~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i  240 (433)
                      +++++++...+.+|+||||++++|.+++.......+++..++.++.||+.||+|||++|||||||||+|||++.....+-
T Consensus        99 v~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~  178 (360)
T 3llt_A           99 VKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKS  178 (360)
T ss_dssp             CCEEEEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEE
T ss_pred             ecccceeeECCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEcccccccc
Confidence            99999999999999999999999999999876667999999999999999999999999999999999999964321000


Q ss_pred             CCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCC
Q 013973          241 PDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE  320 (433)
Q Consensus       241 ~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~  320 (433)
                      . .+.... .............+.+||+|||++..........+||+.|+|||++.+..++.++|||||||++|+|++|.
T Consensus       179 ~-~~~~~~-~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~  256 (360)
T 3llt_A          179 L-ITVRRV-TDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGS  256 (360)
T ss_dssp             E-EEEECT-TTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSS
T ss_pred             c-cchhcc-cccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCC
Confidence            0 000000 00000000002367899999999987666666678999999999999999999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhh-hhhcc--CcccCCCCccchhhHhhhccchhHHHHHhhhcCCchh
Q 013973          321 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAE-KYVRR--GRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG  397 (433)
Q Consensus       321 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  397 (433)
                      .||...+..+.+..+....++.|..+......... .+...  ....||..............      .........++
T Consensus       257 ~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~  330 (360)
T 3llt_A          257 LLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKK------CLPLYKIIKHE  330 (360)
T ss_dssp             CSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHT------CCCHHHHCCCH
T ss_pred             CCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhh------cccccccchHH
Confidence            99999999999999999999999888776543322 22221  23345554443333222111      11112224457


Q ss_pred             HHHHHHHhccccCCCCCCCHHHHhcCCCCC
Q 013973          398 DLTHLLQGLLRYDPTDRLTAREALRHPFFT  427 (433)
Q Consensus       398 ~~~~li~~~L~~dP~~R~ta~ell~hp~f~  427 (433)
                      .+.+||.+||+.||++|||+.|+|+||||+
T Consensus       331 ~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          331 LFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             HHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence            899999999999999999999999999996

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=1.4e-54  Score=421.00  Aligned_cols=251  Identities=22%  Similarity=0.317  Sum_probs=200.0

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCC-----CeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEeccee
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRER-----KEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  167 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~-----~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~  167 (433)
                      -.++|++.+.||+|+||+||+|.+..+     ++.||||+++..  ....+.+..|+.+|.++.    +|||||++++++
T Consensus        62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~----hhpnIV~l~g~~  137 (353)
T 4ase_A           62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG----HHLNVVNLLGAC  137 (353)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC----CCTTBCCEEEEE
T ss_pred             cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcC----CCCcEEEEEEEE
Confidence            357899999999999999999987654     468999999743  334566888999999993    347899999988


Q ss_pred             ec-CCeEEEEEecC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceE
Q 013973          168 DY-RNHICIVFEKL-GSSLYDFLRKNN--------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVL  231 (433)
Q Consensus       168 ~~-~~~~~lV~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NIL  231 (433)
                      .. .+.+||||||| +|+|.++|+...              ...+++..+..|+.||+.||+|||+++||||||||+|||
T Consensus       138 ~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NIL  217 (353)
T 4ase_A          138 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL  217 (353)
T ss_dssp             CCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             EecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCcccee
Confidence            65 56799999999 999999997632              235899999999999999999999999999999999999


Q ss_pred             eeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchh
Q 013973          232 LVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDI  306 (433)
Q Consensus       232 l~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Dv  306 (433)
                      +++++.                           +||+|||+|+......     ...+||+.|||||++.+..|+.++||
T Consensus       218 l~~~~~---------------------------vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDV  270 (353)
T 4ase_A          218 LSEKNV---------------------------VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV  270 (353)
T ss_dssp             ECGGGC---------------------------EEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHH
T ss_pred             eCCCCC---------------------------EEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccE
Confidence            966555                           5555555554332221     23579999999999999999999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHH
Q 013973          307 WSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ  385 (433)
Q Consensus       307 wSlGv~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (433)
                      |||||++|||+| |..||.+.+..+.+..+... |.                    .+                      
T Consensus       271 wS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~-g~--------------------~~----------------------  307 (353)
T 4ase_A          271 WSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-GT--------------------RM----------------------  307 (353)
T ss_dssp             HHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHH-TC--------------------CC----------------------
T ss_pred             eehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHc-CC--------------------CC----------------------
Confidence            999999999998 99999876543332221111 00                    01                      


Q ss_pred             HHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          386 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       386 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                          ..++.+++++.+||.+||+.||++|||+.||++|
T Consensus       308 ----~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          308 ----RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence                1234567899999999999999999999999987

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=3.8e-53  Score=424.14  Aligned_cols=321  Identities=35%  Similarity=0.612  Sum_probs=254.3

Q ss_pred             CCceeecCceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcC-CCCCceEEe
Q 013973           85 GHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD-KGGNRCVQI  163 (433)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~-~~~~~i~~~  163 (433)
                      +.+.....+.+..+|++++.||+|+||.||+|.+..+++.||||+++...........|+.+++.+.+.. .+|+||+.+
T Consensus        85 ~~~~~~~~~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~  164 (429)
T 3kvw_A           85 GSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHM  164 (429)
T ss_dssp             SCBCCCTTCEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCE
T ss_pred             CCccccCCCcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEE
Confidence            3344445667788999999999999999999999999999999999876666777888999999997653 367899999


Q ss_pred             cceeecCCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCC
Q 013973          164 RNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY  243 (433)
Q Consensus       164 ~~~~~~~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~df  243 (433)
                      ++.+...+++|+||||++++|.+++.......+++..++.++.||+.||+|||++|||||||||+|||++.++       
T Consensus       165 ~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~-------  237 (429)
T 3kvw_A          165 LENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQG-------  237 (429)
T ss_dssp             EEEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTT-------
T ss_pred             EeecccCCeEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCC-------
Confidence            9999999999999999988999999987666799999999999999999999999999999999999995432       


Q ss_pred             cCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 013973          244 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF  323 (433)
Q Consensus       244 g~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf  323 (433)
                                        ...+||+|||++..........+||+.|+|||++.+..|+.++|||||||++|||++|.+||
T Consensus       238 ------------------~~~vkL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf  299 (429)
T 3kvw_A          238 ------------------RSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLL  299 (429)
T ss_dssp             ------------------SCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             ------------------CcceEEeecccceecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCC
Confidence                              12388899998877666666678999999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccch-hh---------HhhhccchhHHHHHhhhcC
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASR-ES---------IKSVMKLPRLQNLIMQHVD  393 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---------~~~~~~~~~~~~~~~~~~~  393 (433)
                      .+.+..+.+..+...++..+..++.........+...+...+....... ..         .......+....+......
T Consensus       300 ~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  379 (429)
T 3kvw_A          300 PGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKG  379 (429)
T ss_dssp             CCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTT
T ss_pred             CCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccc
Confidence            9999999999999999999998877655443332222211110000000 00         0000000111122222334


Q ss_pred             CchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          394 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       394 ~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      ..++++.+||.+||+.||++|||++|+|+||||++..
T Consensus       380 ~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~  416 (429)
T 3kvw_A          380 CDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRL  416 (429)
T ss_dssp             CCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC---
T ss_pred             cchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccCC
Confidence            5678899999999999999999999999999998753

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=3.2e-52  Score=412.55  Aligned_cols=338  Identities=30%  Similarity=0.549  Sum_probs=254.1

Q ss_pred             CCCceeecCceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCC---CCCce
Q 013973           84 DGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK---GGNRC  160 (433)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~---~~~~i  160 (433)
                      .+.+.+..++.+.++|++++.||+|+||+||+|++..+++.||||+++......+.+..|+.+++.+.+...   +|++|
T Consensus        24 ~~~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i  103 (397)
T 1wak_A           24 GGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMV  103 (397)
T ss_dssp             --CCSSCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGB
T ss_pred             CCceEEehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCccee
Confidence            345677888889999999999999999999999999999999999998766667778899999999986542   36779


Q ss_pred             EEecceee----cCCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCceEeecc
Q 013973          161 VQIRNWFD----YRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL-CMIHTDLKPENVLLVSS  235 (433)
Q Consensus       161 ~~~~~~~~----~~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlKp~NILl~~~  235 (433)
                      +++++.+.    ....+|+||||++++|.+++.......+++..++.++.||+.||.|||++ |||||||||+|||++.+
T Consensus       104 v~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~  183 (397)
T 1wak_A          104 VQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVN  183 (397)
T ss_dssp             CCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCC
T ss_pred             eeeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEecc
Confidence            99999987    56789999999999999988876656799999999999999999999998 99999999999999876


Q ss_pred             CccccCCCcCCCC------CCCC----------Ccc------cccCCCCCCEEEEecCCccccCCCCCceeecCcccchh
Q 013973          236 EYIKVPDYKSSLH------TPKD----------SSY------FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPE  293 (433)
Q Consensus       236 ~~~~i~dfg~~~~------~~~~----------~~~------~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE  293 (433)
                      +.....+++....      .+..          ...      .........+||+|||.+..........+||+.|+|||
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE  263 (397)
T 1wak_A          184 EQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLE  263 (397)
T ss_dssp             HHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHH
T ss_pred             chhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCCh
Confidence            5322111110000      0000          000      00001234799999999987766666678999999999


Q ss_pred             hhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCC
Q 013973          294 VILGLGWTYPCDIWSVGCILVELCTGEALFQTHE------NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE  367 (433)
Q Consensus       294 ~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~------~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  367 (433)
                      ++.+..++.++|||||||++|||++|..||...+      ..+.+..+...++..|..++.........+...+.+..-.
T Consensus       264 ~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  343 (397)
T 1wak_A          264 VLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHIT  343 (397)
T ss_dssp             HHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCC
T ss_pred             hhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccc
Confidence            9999999999999999999999999999998654      5677888899999999887665443333322222221111


Q ss_pred             CccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          368 GAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      ........       .............+.++.+||.+||+.||++|||++|+|+||||++
T Consensus       344 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          344 KLKPWGLF-------EVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS  397 (397)
T ss_dssp             CCCCCCHH-------HHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred             ccCCcchh-------HhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence            11000000       0000011122345678999999999999999999999999999974

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=8.7e-52  Score=403.07  Aligned_cols=336  Identities=45%  Similarity=0.847  Sum_probs=266.2

Q ss_pred             CCCCCCceeecCceecCcEEEEeeeeccccEEEEEEEECCCC-eEEEEEEeecchhhHHHHHHHHHHHHHHHhcCC-CCC
Q 013973           81 DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERK-EMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK-GGN  158 (433)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~-~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~-~~~  158 (433)
                      ++..+.+....++.+.++|++++.||+|+||.||+|.+..++ +.||+|+++......+.+..|+.+++.+.+... .+.
T Consensus         3 ~~~~~~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~   82 (355)
T 2eu9_A            3 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKF   82 (355)
T ss_dssp             BCTTSCBCCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCS
T ss_pred             cccCCCcccccCceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCce
Confidence            455677888889999999999999999999999999998776 789999998766667778889999999987543 445


Q ss_pred             ceEEecceeecCCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCcc
Q 013973          159 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYI  238 (433)
Q Consensus       159 ~i~~~~~~~~~~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~  238 (433)
                      +++.+.+++...+.+|+||||++++|.+++.......+++..+..++.||+.||+|||++|||||||||+|||++..+..
T Consensus        83 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~  162 (355)
T 2eu9_A           83 LCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFE  162 (355)
T ss_dssp             CBCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEE
T ss_pred             eEEEeeeeeeeCCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccc
Confidence            58889999999999999999999999999887765679999999999999999999999999999999999999765543


Q ss_pred             ccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh
Q 013973          239 KVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT  318 (433)
Q Consensus       239 ~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt  318 (433)
                      .+.+.....        ....+.++.+||+|||++..........+||+.|+|||++.+..++.++|||||||++|||++
T Consensus       163 ~~~~~~~~~--------~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~  234 (355)
T 2eu9_A          163 TLYNEHKSC--------EEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR  234 (355)
T ss_dssp             EEECCC-CC--------CEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             ccccccccc--------cccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHh
Confidence            333221111        011145678999999999876666666789999999999999999999999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhH
Q 013973          319 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  398 (433)
Q Consensus       319 g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (433)
                      |..||...+..+.+..+....++.|..+.......  .+...+...|+............+....   .........+.+
T Consensus       235 g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~  309 (355)
T 2eu9_A          235 GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQ--KYFYKGGLVWDENSSDGRYVKENCKPLK---SYMLQDSLEHVQ  309 (355)
T ss_dssp             SSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCG--GGEETTEECCCTTSHHHHHHHHHCCCGG---GGCSCCSHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccch--hhhcccccccccccchhccccccCCccc---ccccccchhHHH
Confidence            99999999999999999999999999887765332  2333444445443322211111111000   000111233568


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          399 LTHLLQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       399 ~~~li~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      +.+||.+||+.||++|||+.|+|+||||++.
T Consensus       310 l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  340 (355)
T 2eu9_A          310 LFDLMRRMLEFDPAQRITLAEALLHPFFAGL  340 (355)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHTTSGGGGGC
T ss_pred             HHHHHHHHhcCChhhCcCHHHHhcChhhcCC
Confidence            9999999999999999999999999999864

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=8e-52  Score=400.53  Aligned_cols=331  Identities=46%  Similarity=0.833  Sum_probs=260.6

Q ss_pred             ceeecCceecCcEEEEeeeeccccEEEEEEEE-CCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcC-CCCCceEEec
Q 013973           87 YMFALGENLTSRYKIHSKMGEGTFGQVLECWD-RERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD-KGGNRCVQIR  164 (433)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~-~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~-~~~~~i~~~~  164 (433)
                      .....++.+.++|++++.||+|+||.||+|.+ ..+++.||||+++......+....|+.+++.+.+.. ..++++++++
T Consensus         4 ~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~   83 (339)
T 1z57_A            4 LICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQML   83 (339)
T ss_dssp             GTCSTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEE
T ss_pred             eeeecCCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeee
Confidence            34556778889999999999999999999998 568899999999876666777889999999998753 3456799999


Q ss_pred             ceeecCCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCc
Q 013973          165 NWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  244 (433)
Q Consensus       165 ~~~~~~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg  244 (433)
                      +++...+.+|+||||++++|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++..+.....+.+
T Consensus        84 ~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~  163 (339)
T 1z57_A           84 EWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPK  163 (339)
T ss_dssp             EEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC--
T ss_pred             cccccCCcEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCc
Confidence            99999999999999999999999988766679999999999999999999999999999999999999765432221111


Q ss_pred             CCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 013973          245 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                      ...        ......++.+||+|||.+..........+||+.|+|||++.+..++.++|||||||++|||++|..||.
T Consensus       164 ~~~--------~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~  235 (339)
T 1z57_A          164 IKR--------DERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFP  235 (339)
T ss_dssp             --C--------EEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             ccc--------ccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCC
Confidence            000        000012567999999999876666666789999999999999999999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHH
Q 013973          325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  404 (433)
Q Consensus       325 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  404 (433)
                      ..+..+....+....++.|..+......  ..+.......|+................   .......+..+.++.+||.
T Consensus       236 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~li~  310 (339)
T 1z57_A          236 THDSKEHLAMMERILGPLPKHMIQKTRK--RKYFHHDRLDWDEHSSAGRYVSRACKPL---KEFMLSQDVEHERLFDLIQ  310 (339)
T ss_dssp             CSCHHHHHHHHHHHHCSCCHHHHHHCSC--GGGEETTEECCCTTSHHHHHHHHHCCCG---GGGCSCCSHHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHhCCCCHHHHhhccc--hhHHhhccccccccccccchhhhcCcch---hhhcccchhhHHHHHHHHH
Confidence            9999999999999999999988776543  2333344455554332221111111000   0001112344678999999


Q ss_pred             hccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          405 GLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       405 ~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      +||+.||.+|||+.|+|+||||+...
T Consensus       311 ~~L~~dP~~Rpt~~ell~hp~f~~~~  336 (339)
T 1z57_A          311 KMLEYDPAKRITLREALKHPFFDLLK  336 (339)
T ss_dssp             HHTCSSTTTSCCHHHHTTSGGGGGGG
T ss_pred             HHhCcCcccccCHHHHhcCHHHHHHh
Confidence            99999999999999999999998643

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=7.7e-52  Score=408.68  Aligned_cols=319  Identities=36%  Similarity=0.682  Sum_probs=247.4

Q ss_pred             CCceeecCceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcC-CCCCceEEe
Q 013973           85 GHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD-KGGNRCVQI  163 (433)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~-~~~~~i~~~  163 (433)
                      ..+.+..++.+.++|++.+.||+|+||+||+|.+..+++.||||+++...........|+.+++.+.++. ..+++++.+
T Consensus        42 ~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~  121 (382)
T 2vx3_A           42 YDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHL  121 (382)
T ss_dssp             SCBCCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCE
T ss_pred             CcEEeecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEe
Confidence            3456777888999999999999999999999999999999999999866666677788999999987543 234569999


Q ss_pred             cceeecCCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH--HCCceeccCCCCceEeeccCccccC
Q 013973          164 RNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH--DLCMIHTDLKPENVLLVSSEYIKVP  241 (433)
Q Consensus       164 ~~~~~~~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH--~~~ivHrDlKp~NILl~~~~~~~i~  241 (433)
                      ++.+...+.+|+||||++++|.+++.......+++..++.++.||+.||.|||  +.|||||||||+|||++.       
T Consensus       122 ~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~-------  194 (382)
T 2vx3_A          122 KRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCN-------  194 (382)
T ss_dssp             EEEEEETTEEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESS-------
T ss_pred             eeeeccCCceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEec-------
Confidence            99999999999999999889999998876567999999999999999999999  579999999999999953       


Q ss_pred             CCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCC
Q 013973          242 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA  321 (433)
Q Consensus       242 dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~  321 (433)
                                        +.++.+||+|||++..........+||+.|+|||++.+..++.++|||||||++|||++|..
T Consensus       195 ------------------~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~  256 (382)
T 2vx3_A          195 ------------------PKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEP  256 (382)
T ss_dssp             ------------------TTSCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             ------------------CCCCcEEEEeccCceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence                              23457899999988776665566789999999999999999999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhcc---CcccCCCCc--------cchhhHhhhccc----hhHH-
Q 013973          322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR---GRLDWPEGA--------ASRESIKSVMKL----PRLQ-  385 (433)
Q Consensus       322 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~--------~~~~~~~~~~~~----~~~~-  385 (433)
                      ||.+.+..+.+..+...++..|..++...... ..++..   +.+......        .....+......    +... 
T Consensus       257 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  335 (382)
T 2vx3_A          257 LFSGANEVDQMNKIVEVLGIPPAHILDQAPKA-RKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRR  335 (382)
T ss_dssp             SSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTH-HHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTT
T ss_pred             CCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHH-HHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccc
Confidence            99999999999999999999988776543322 122211   111000000        000000000000    0000 


Q ss_pred             HHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          386 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       386 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      ..........+.++.+||.+||+.||++|||++|+|+||||++.
T Consensus       336 ~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~  379 (382)
T 2vx3_A          336 AGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKT  379 (382)
T ss_dssp             TTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred             cccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccC
Confidence            00000000122478999999999999999999999999999864

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=4.7e-52  Score=406.58  Aligned_cols=261  Identities=26%  Similarity=0.449  Sum_probs=220.3

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh-------hHHHHHHHHHHHHHHHhcCCCCCceEEecce
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-------YREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  166 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~  166 (433)
                      .+.++|++.+.||+|+||.||+|.++.+|+.||+|+++....       ..+.+..|+.+++.+     .||||++++++
T Consensus         9 ~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~l~~~   83 (361)
T 2yab_A            9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV-----LHPNIITLHDV   83 (361)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTC-----CCTTBCCEEEE
T ss_pred             ChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhC-----CCcCCCcEEEE
Confidence            456789999999999999999999999999999999974321       245678899999887     67999999999


Q ss_pred             eecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcC
Q 013973          167 FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  245 (433)
Q Consensus       167 ~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~  245 (433)
                      +.+.+.+|+||||+ |++|.+++...+  .+++..+..++.||+.||.|||++|||||||||+|||++.++         
T Consensus        84 ~~~~~~~~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~---------  152 (361)
T 2yab_A           84 YENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN---------  152 (361)
T ss_dssp             EECSSEEEEEEECCCSCBHHHHHTTCS--CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTT---------
T ss_pred             EEeCCEEEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCC---------
Confidence            99999999999999 999999997654  799999999999999999999999999999999999996433         


Q ss_pred             CCCCCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 013973          246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF  323 (433)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf  323 (433)
                                    .....+||+|||++.......  ...+||+.|+|||++.+..|+.++|||||||++|+|++|..||
T Consensus       153 --------------~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf  218 (361)
T 2yab_A          153 --------------IPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF  218 (361)
T ss_dssp             --------------SSSCCEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSS
T ss_pred             --------------CCccCEEEEecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCC
Confidence                          112368888888887554332  3458999999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      .+.+..+.+..+.......+..                                             .+...+.++++||
T Consensus       219 ~~~~~~~~~~~i~~~~~~~~~~---------------------------------------------~~~~~s~~~~~li  253 (361)
T 2yab_A          219 LGDTKQETLANITAVSYDFDEE---------------------------------------------FFSQTSELAKDFI  253 (361)
T ss_dssp             CCSSHHHHHHHHHTTCCCCCHH---------------------------------------------HHTTSCHHHHHHH
T ss_pred             CCCCHHHHHHHHHhcCCCCCch---------------------------------------------hccCCCHHHHHHH
Confidence            9887776665544332222211                                             2345677899999


Q ss_pred             HhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          404 QGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      .+||+.||.+|||+.|+|+||||+..
T Consensus       254 ~~~L~~dP~~R~t~~e~l~hp~~~~~  279 (361)
T 2yab_A          254 RKLLVKETRKRLTIQEALRHPWITPV  279 (361)
T ss_dssp             HHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred             HHHCCCChhHCcCHHHHhcCcCcCCC
Confidence            99999999999999999999999853

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=1e-51  Score=399.25  Aligned_cols=252  Identities=23%  Similarity=0.376  Sum_probs=213.0

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      ..++|++++.||+|+||.||+|.+..+|+.||||++...   ....+.+.+|+.+++.+     .|+||+++++++...+
T Consensus        13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~l~~~~~~~~   87 (328)
T 3fe3_A           13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL-----NHPNIVKLFEVIETEK   87 (328)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEECSS
T ss_pred             ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEEECC
Confidence            357799999999999999999999999999999999643   23345677899999888     6799999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+|+||||+ +++|.+++...+  .+++..+..++.||+.||+|||++|||||||||+|||++                 
T Consensus        88 ~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~-----------------  148 (328)
T 3fe3_A           88 TLYLIMEYASGGEVFDYLVAHG--RMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLD-----------------  148 (328)
T ss_dssp             EEEEEECCCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-----------------
T ss_pred             EEEEEEECCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEc-----------------
Confidence            999999999 899999998765  799999999999999999999999999999999999994                 


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCC-CcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWT-YPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                                .++.+||+|||++.......  ...+||+.|+|||++.+..+. .++|||||||++|+|++|..||.+.+
T Consensus       149 ----------~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  218 (328)
T 3fe3_A          149 ----------ADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN  218 (328)
T ss_dssp             ----------TTSCEEECSTTCCGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ----------CCCCEEEeeccCceecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC
Confidence                      45567777777775443322  335799999999999988875 79999999999999999999999877


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ..+....+..                       +.+..                          +...++++.+||.+||
T Consensus       219 ~~~~~~~i~~-----------------------~~~~~--------------------------p~~~s~~~~~li~~~L  249 (328)
T 3fe3_A          219 LKELRERVLR-----------------------GKYRI--------------------------PFYMSTDCENLLKRFL  249 (328)
T ss_dssp             HHHHHHHHHH-----------------------CCCCC--------------------------CTTSCHHHHHHHHHHC
T ss_pred             HHHHHHHHHh-----------------------CCCCC--------------------------CCCCCHHHHHHHHHHC
Confidence            6655444322                       11111                          1245778999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCC
Q 013973          408 RYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       408 ~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      +.||.+|||++|+++||||+..
T Consensus       250 ~~dP~~R~t~~eil~h~~~~~~  271 (328)
T 3fe3_A          250 VLNPIKRGTLEQIMKDRWINAG  271 (328)
T ss_dssp             CSSTTTSCCHHHHTTCTTTTTT
T ss_pred             CCChhHCcCHHHHhcCHhhcCC
Confidence            9999999999999999999864

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=5.5e-53  Score=403.10  Aligned_cols=190  Identities=23%  Similarity=0.306  Sum_probs=152.1

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHH--HHHHHhcCCCCCceEEecceeecCC---
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEV--LQQLAKHDKGGNRCVQIRNWFDYRN---  171 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~--l~~l~~~~~~~~~i~~~~~~~~~~~---  171 (433)
                      .+|.+.++||+|+||+||+|++  +|+.||||+++....  .....|.++  +..+     +||||+++++++...+   
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~--~~~~~e~Ei~~~~~l-----~HpNIv~l~g~~~~~~~~~   73 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREE--RSWFREAEIYQTVML-----RHENILGFIAADNKDNGTW   73 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGH--HHHHHHHHHHTSTTC-----CCTTBCCEEEEEEEECSSS
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccch--hhHHHHHHHHHHhcC-----CCCCCCcEEEEEEecCCCc
Confidence            5699999999999999999987  588999999975433  233334443  3333     7899999999987653   


Q ss_pred             -eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CceeccCCCCceEeeccCccccC
Q 013973          172 -HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL--------CMIHTDLKPENVLLVSSEYIKVP  241 (433)
Q Consensus       172 -~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~--------~ivHrDlKp~NILl~~~~~~~i~  241 (433)
                       .+||||||| +|+|.++|+..   .+++..+..++.|++.||+|||++        +||||||||+|||++.+      
T Consensus        74 ~~~~lV~Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~------  144 (303)
T 3hmm_A           74 TQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN------  144 (303)
T ss_dssp             EEEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTT------
T ss_pred             eEEEEEecCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCC------
Confidence             689999999 99999999875   599999999999999999999987        89999999999999544      


Q ss_pred             CCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-------CceeecCcccchhhhhCC------CCCCcchhHH
Q 013973          242 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-------NYIVSTRHYRAPEVILGL------GWTYPCDIWS  308 (433)
Q Consensus       242 dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~gt~~y~aPE~~~~~------~~~~~~DvwS  308 (433)
                                           +.+||+|||+++......       ...+||+.|||||++.+.      .|+.++||||
T Consensus       145 ---------------------~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS  203 (303)
T 3hmm_A          145 ---------------------GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYA  203 (303)
T ss_dssp             ---------------------SCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHH
T ss_pred             ---------------------CCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhh
Confidence                                 456666666655332221       235799999999999865      3678999999


Q ss_pred             HHHHHHHHHhCCCCCCC
Q 013973          309 VGCILVELCTGEALFQT  325 (433)
Q Consensus       309 lGv~l~elltg~~Pf~~  325 (433)
                      |||++|||+||.+||..
T Consensus       204 ~Gvvl~El~tg~~~~~~  220 (303)
T 3hmm_A          204 MGLVFWEIARRCSIGGI  220 (303)
T ss_dssp             HHHHHHHHHHTBCBTTB
T ss_pred             HHHHHHHHHHCCCCCCc
Confidence            99999999999888754

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=1.5e-51  Score=416.32  Aligned_cols=300  Identities=26%  Similarity=0.449  Sum_probs=230.3

Q ss_pred             CceeecCc---eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCc
Q 013973           86 HYMFALGE---NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNR  159 (433)
Q Consensus        86 ~~~~~~~~---~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~  159 (433)
                      .+.+..++   .+.++|++++.||+|+||+||+|++..+++.||||++...   ......+.+|+.+++.+     .|+|
T Consensus        48 ~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpn  122 (464)
T 3ttj_A           48 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-----NHKN  122 (464)
T ss_dssp             EEEEEC--CEEEEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHC-----CCTT
T ss_pred             ceeeecCCcceeecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhC-----CCCC
Confidence            44444444   4568999999999999999999999999999999999742   33455677899999888     6799


Q ss_pred             eEEecceeecC------CeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEee
Q 013973          160 CVQIRNWFDYR------NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV  233 (433)
Q Consensus       160 i~~~~~~~~~~------~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~  233 (433)
                      |+++++++...      ..+||||||++++|.+.+..    .+++..++.++.||+.||+|||++|||||||||+|||++
T Consensus       123 Iv~l~~~~~~~~~~~~~~~~~lv~E~~~~~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~  198 (464)
T 3ttj_A          123 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK  198 (464)
T ss_dssp             BCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC
T ss_pred             CCcEEEEEccCCccccCCeEEEEEeCCCCCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEe
Confidence            99999998654      56899999998888888753    499999999999999999999999999999999999995


Q ss_pred             ccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC--CCceeecCcccchhhhhCCCCCCcchhHHHHH
Q 013973          234 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGC  311 (433)
Q Consensus       234 ~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv  311 (433)
                      .                           ++.+||+|||+++.....  ....+||+.|+|||++.+..|+.++|||||||
T Consensus       199 ~---------------------------~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~  251 (464)
T 3ttj_A          199 S---------------------------DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC  251 (464)
T ss_dssp             T---------------------------TSCEEECCCCCC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHH
T ss_pred             C---------------------------CCCEEEEEEEeeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHH
Confidence            4                           455677777766644332  23458999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhh
Q 013973          312 ILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH  391 (433)
Q Consensus       312 ~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (433)
                      ++|||++|++||.+.+..+++..+...+|..+++.+.........++..... +...  .   +....... +.......
T Consensus       252 il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~-~~~~--~---~~~~~~~~-~~~~~~~~  324 (464)
T 3ttj_A          252 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK-YAGL--T---FPKLFPDS-LFPADSEH  324 (464)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCC-CCCC--C---HHHHSCGG-GSCCSSHH
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccc-cCCC--C---hHHhCccc-cccccccc
Confidence            9999999999999999999999999999999998887776666666543211 0000  0   00000000 00000000


Q ss_pred             cCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          392 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       392 ~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      ....++++.+||.+||+.||++|||++|+|+||||+.
T Consensus       325 ~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~  361 (464)
T 3ttj_A          325 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV  361 (464)
T ss_dssp             HHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             ccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhh
Confidence            0112668999999999999999999999999999974

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=5.1e-52  Score=397.73  Aligned_cols=288  Identities=28%  Similarity=0.503  Sum_probs=222.5

Q ss_pred             CceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch------hhHHHHHHHHHHHHHHHhcCCCCCceEEecc
Q 013973           92 GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRN  165 (433)
Q Consensus        92 ~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~------~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~  165 (433)
                      +..+.++|++++.||+|+||+||+|++..+++.||||++....      ........|+.+++.+...  .|+||+++++
T Consensus         4 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~--~h~niv~~~~   81 (308)
T 3g33_A            4 GSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAF--EHPNVVRLMD   81 (308)
T ss_dssp             ------CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHH--CCTTBCCEEE
T ss_pred             CcccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhc--CCCCeEEeee
Confidence            4456788999999999999999999999999999999986321      1234566788888877532  4689999999


Q ss_pred             eeecCC-----eEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCcccc
Q 013973          166 WFDYRN-----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKV  240 (433)
Q Consensus       166 ~~~~~~-----~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i  240 (433)
                      ++....     .+++||||++++|.+++.......+++..+..++.||+.||+|||++|||||||||+|||++.      
T Consensus        82 ~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~------  155 (308)
T 3g33_A           82 VCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS------  155 (308)
T ss_dssp             EEEECCSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECT------
T ss_pred             eeeccCCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcC------
Confidence            987654     689999999889999999876566999999999999999999999999999999999999954      


Q ss_pred             CCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh
Q 013973          241 PDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT  318 (433)
Q Consensus       241 ~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt  318 (433)
                                           ++.+||+|||++.......  ...+||+.|+|||++.+..++.++|||||||++|+|++
T Consensus       156 ---------------------~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~  214 (308)
T 3g33_A          156 ---------------------GGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR  214 (308)
T ss_dssp             ---------------------TSCEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTT
T ss_pred             ---------------------CCCEEEeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHh
Confidence                                 4567777777765443322  33579999999999999999999999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhH
Q 013973          319 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  398 (433)
Q Consensus       319 g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (433)
                      |..||.+.+..+....+....+..+...+.......       ...++..               ...........++.+
T Consensus       215 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-------~~~~~~~---------------~~~~~~~~~~~~~~~  272 (308)
T 3g33_A          215 RKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP-------RGAFPPR---------------GPRPVQSVVPEMEES  272 (308)
T ss_dssp             SSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSC-------GGGSCCC---------------CCCCHHHHSCSCCHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhcc-------ccccCCC---------------CCCcHHHhCccccHH
Confidence            999999999999988888888876653221100000       0000000               001112234567889


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          399 LTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       399 ~~~li~~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      +.+||.+||+.||++|||+.|+|+||||++..
T Consensus       273 ~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~  304 (308)
T 3g33_A          273 GAQLLLEMLTFNPHKRISAFRALQHSYLHKDE  304 (308)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred             HHHHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence            99999999999999999999999999998764

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=1.6e-51  Score=416.11  Aligned_cols=310  Identities=26%  Similarity=0.460  Sum_probs=217.7

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee---
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD---  168 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~---  168 (433)
                      +.++|++++.||+|+||+||+|+++.+++.||||++...   ....+.+.+|+.+++.+     .|+||+++++++.   
T Consensus        51 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~  125 (458)
T 3rp9_A           51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRL-----NHDHVVKVLDIVIPKD  125 (458)
T ss_dssp             SCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-----CCTTBCCEEEECCCSC
T ss_pred             cCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhC-----CCCCCCceEEEEecCC
Confidence            457899999999999999999999999999999998642   23446677899999998     6799999999983   


Q ss_pred             --cCCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCC
Q 013973          169 --YRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  246 (433)
Q Consensus       169 --~~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~  246 (433)
                        ....+|+||||++++|.+++....  .+++..++.++.||+.||+|||++|||||||||+|||++.++.+||+|||++
T Consensus       126 ~~~~~~~~lv~e~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla  203 (458)
T 3rp9_A          126 VEKFDELYVVLEIADSDFKKLFRTPV--YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLA  203 (458)
T ss_dssp             TTTCCCEEEEECCCSEEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             cccCceEEEEEeccccchhhhcccCC--CCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccc
Confidence              446899999999999999998654  7999999999999999999999999999999999999999999999999988


Q ss_pred             CCCCCCCcccc---cCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhh-CCCCCCcchhHHHHHHHHHHHh----
Q 013973          247 LHTPKDSSYFK---RMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCT----  318 (433)
Q Consensus       247 ~~~~~~~~~~~---~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGv~l~ellt----  318 (433)
                      ...........   .........+.+|+............+||+.|+|||++. +..|+.++|||||||++|||++    
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~  283 (458)
T 3rp9_A          204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKE  283 (458)
T ss_dssp             BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTT
T ss_pred             hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccc
Confidence            76543221100   001112334455554443333344568999999999874 5679999999999999999999    


Q ss_pred             -------CCCCCCCCC--------------------hHHHHHHHHHHhCCCCHHHHHHHhhhh-hhhhccCcccCCCCcc
Q 013973          319 -------GEALFQTHE--------------------NLEHLAMMERVLGPLPQHMLKRVDRHA-EKYVRRGRLDWPEGAA  370 (433)
Q Consensus       319 -------g~~Pf~~~~--------------------~~~~~~~i~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~  370 (433)
                             |.++|.+.+                    ..+++..+...+|..+.+.+..+.... ..++..-    +... 
T Consensus       284 ~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~----~~~~-  358 (458)
T 3rp9_A          284 NVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIF----PKRE-  358 (458)
T ss_dssp             TCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTS----CCCC-
T ss_pred             cccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhc----CCCC-
Confidence                   778886644                    357788888999999887766543222 2222110    0000 


Q ss_pred             chhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          371 SRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                                    .......++..++++.+||.+||+.||++|||++|+|+||||++-+
T Consensus       359 --------------~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~  404 (458)
T 3rp9_A          359 --------------GTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVR  404 (458)
T ss_dssp             --------------CCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             --------------CCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcC
Confidence                          0001122345688999999999999999999999999999998753

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=1.5e-51  Score=395.34  Aligned_cols=286  Identities=29%  Similarity=0.441  Sum_probs=224.7

Q ss_pred             CceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           92 GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        92 ~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      ++.+.++|++++.||+|+||+||+|.+. +++.||+|+++...   .....+..|+.+++.+     .|+||+++++++.
T Consensus        16 ~q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~   89 (311)
T 3niz_A           16 FQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKEL-----HHPNIVSLIDVIH   89 (311)
T ss_dssp             EECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHC-----CCTTBCCEEEEEC
T ss_pred             ecchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHc-----CCCCEeeeeeEEc
Confidence            3456688999999999999999999986 48899999986432   2345677899999988     6789999999999


Q ss_pred             cCCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          169 YRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       169 ~~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      +.+.+++||||+.++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.              
T Consensus        90 ~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~--------------  154 (311)
T 3niz_A           90 SERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINS--------------  154 (311)
T ss_dssp             CSSCEEEEEECCSEEHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT--------------
T ss_pred             cCCEEEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECC--------------
Confidence            999999999999889999987654 46999999999999999999999999999999999999954              


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                                   ++.+||+|||++......   ....+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.
T Consensus       155 -------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  221 (311)
T 3niz_A          155 -------------DGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFP  221 (311)
T ss_dssp             -------------TCCEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             -------------CCCEEEccCcCceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCC
Confidence                         456777777777644322   123478999999999987 568999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHH
Q 013973          325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  404 (433)
Q Consensus       325 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  404 (433)
                      +....+.+..+...++..+...+.............  +....                 ........+.++.++.+||.
T Consensus       222 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----------------~~~~~~~~~~~~~~~~~li~  282 (311)
T 3niz_A          222 GVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRT--FQVFE-----------------KKPWSSIIPGFCQEGIDLLS  282 (311)
T ss_dssp             CSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCC--CCCCC-----------------CCCHHHHSTTCCHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcc--ccccc-----------------CCcHHHhCcccCHHHHHHHH
Confidence            988888888888888776654333322211110000  00000                 00011223467789999999


Q ss_pred             hccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          405 GLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       405 ~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      +||+.||++|||++|+|+||||++..
T Consensus       283 ~~L~~dP~~Rpt~~ell~hp~f~~~~  308 (311)
T 3niz_A          283 NMLCFDPNKRISARDAMNHPYFKDLD  308 (311)
T ss_dssp             HHSCSCTTTSCCHHHHHTSGGGTTSC
T ss_pred             HHcCCChhHCCCHHHHhcCcccccCC
Confidence            99999999999999999999999764

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=8.9e-52  Score=398.69  Aligned_cols=259  Identities=23%  Similarity=0.402  Sum_probs=221.4

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      +.++|++.+.||+|+||.||+|.+..+++.||+|++.........+..|+.+++.+     .|+||+++++++.+.+.++
T Consensus         3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~~~~~~~~~~~~~   77 (321)
T 1tki_A            3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIA-----RHRNILHLHESFESMEELV   77 (321)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHS-----CCTTBCCEEEEEEETTEEE
T ss_pred             hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhC-----CCCCCCeEeEEEecCCEEE
Confidence            46789999999999999999999999999999999976555666778899999988     6799999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +||||+ |++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.                   
T Consensus        78 lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~-------------------  137 (321)
T 1tki_A           78 MIFEFISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT-------------------  137 (321)
T ss_dssp             EEECCCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-------------------
T ss_pred             EEEEeCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcc-------------------
Confidence            999999 889999997643 46999999999999999999999999999999999999953                   


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                            +.++.+||+|||++.......  ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.
T Consensus       138 ------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~  211 (321)
T 1tki_A          138 ------RRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI  211 (321)
T ss_dssp             ------SSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred             ------CCCCCEEEEECCCCeECCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHH
Confidence                  124678888888887654433  235799999999999998899999999999999999999999998877766


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      ...+.......+..                                             .+..++.++.+||.+||+.||
T Consensus       212 ~~~i~~~~~~~~~~---------------------------------------------~~~~~s~~~~~li~~~L~~dp  246 (321)
T 1tki_A          212 IENIMNAEYTFDEE---------------------------------------------AFKEISIEAMDFVDRLLVKER  246 (321)
T ss_dssp             HHHHHHTCCCCCHH---------------------------------------------HHTTSCHHHHHHHHTTSCSSG
T ss_pred             HHHHHcCCCCCChh---------------------------------------------hhccCCHHHHHHHHHHcCCCh
Confidence            65544432222211                                             123567789999999999999


Q ss_pred             CCCCCHHHHhcCCCCCCC
Q 013973          412 TDRLTAREALRHPFFTRD  429 (433)
Q Consensus       412 ~~R~ta~ell~hp~f~~~  429 (433)
                      .+|||+.|+|+||||++.
T Consensus       247 ~~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          247 KSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             GGSCCHHHHHHSHHHHSC
T ss_pred             hHCcCHHHHhcChhhccC
Confidence            999999999999999764

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=7e-52  Score=404.29  Aligned_cols=252  Identities=25%  Similarity=0.393  Sum_probs=207.9

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .++|++++.||+|+||+||+|+++.+++.||||++++..    ........|..++..+.    +|++|+++++++.+.+
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~----~hp~Iv~l~~~~~~~~   97 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR----NHPFLTQLFCCFQTPD   97 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTT----TCTTBCCEEEEEECSS
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhcc----CCCceeeEEEEEEeCC
Confidence            367999999999999999999999999999999997432    23345567888877663    5688999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+|+||||+ ||+|.+++....  .+++..++.|+.||+.||+|||++|||||||||+|||++.+               
T Consensus        98 ~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~---------------  160 (353)
T 3txo_A           98 RLFFVMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHE---------------  160 (353)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT---------------
T ss_pred             EEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCC---------------
Confidence            999999999 899999998764  79999999999999999999999999999999999999554               


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCC---CCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                                  +.+||+|||++.....   .....+||+.|+|||++.+..|+.++|||||||++|||++|..||.+.+
T Consensus       161 ------------g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~  228 (353)
T 3txo_A          161 ------------GHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN  228 (353)
T ss_dssp             ------------SCEEECCCTTCBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ------------CCEEEccccceeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC
Confidence                        4566666666553221   1234589999999999999899999999999999999999999999887


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ..+.+..+...                       ...+                          +..++.++.+||.+||
T Consensus       229 ~~~~~~~i~~~-----------------------~~~~--------------------------p~~~~~~~~~li~~lL  259 (353)
T 3txo_A          229 EDDLFEAILND-----------------------EVVY--------------------------PTWLHEDATGILKSFM  259 (353)
T ss_dssp             HHHHHHHHHHC-----------------------CCCC--------------------------CTTSCHHHHHHHHHHT
T ss_pred             HHHHHHHHHcC-----------------------CCCC--------------------------CCCCCHHHHHHHHHHh
Confidence            77665554321                       1111                          2346778999999999


Q ss_pred             ccCCCCCCCH------HHHhcCCCCCCC
Q 013973          408 RYDPTDRLTA------REALRHPFFTRD  429 (433)
Q Consensus       408 ~~dP~~R~ta------~ell~hp~f~~~  429 (433)
                      ++||.+||++      .|+++||||++.
T Consensus       260 ~~dP~~R~~~~~~~~~~~il~hp~f~~~  287 (353)
T 3txo_A          260 TKNPTMRLGSLTQGGEHAILRHPFFKEI  287 (353)
T ss_dssp             CSSGGGSTTSGGGTCTHHHHTSGGGTTC
T ss_pred             hhCHHHccCCcccCCHHHHhhCCcccCC
Confidence            9999999998      899999999864

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=2.5e-51  Score=397.91  Aligned_cols=250  Identities=24%  Similarity=0.415  Sum_probs=209.5

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++++.||+|+||+||+|+++.+++.||+|++++..    ........|+.+++.+     .|++|+++++.+.+.+.
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~l~~~~~~~~~   79 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-----RHPFLTALKYAFQTHDR   79 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-----CCTTBCCEEEEEECSSE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhC-----CCCcCcceEEEEEeCCE
Confidence            67999999999999999999999999999999997432    2344567788888766     67999999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +|+||||+ ||+|.+++...+  .+++..++.++.||+.||+|||++|||||||||+|||++.+                
T Consensus        80 ~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~----------------  141 (337)
T 1o6l_A           80 LCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD----------------  141 (337)
T ss_dssp             EEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT----------------
T ss_pred             EEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCC----------------
Confidence            99999999 899999998764  79999999999999999999999999999999999999554                


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCC---CCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                                 +.+||+|||++.....   .....+||+.|+|||++.+..|+.++|||||||++|||++|..||.+.+.
T Consensus       142 -----------g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  210 (337)
T 1o6l_A          142 -----------GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH  210 (337)
T ss_dssp             -----------SCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             -----------CCEEEeeccchhhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH
Confidence                       4566666666543221   12346899999999999999999999999999999999999999988776


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      .+....+...                       ...                          ++..+++++.+||.+||+
T Consensus       211 ~~~~~~i~~~-----------------------~~~--------------------------~p~~~s~~~~~li~~lL~  241 (337)
T 1o6l_A          211 ERLFELILME-----------------------EIR--------------------------FPRTLSPEAKSLLAGLLK  241 (337)
T ss_dssp             HHHHHHHHHC-----------------------CCC--------------------------CCTTSCHHHHHHHHHHTC
T ss_pred             HHHHHHHHcC-----------------------CCC--------------------------CCCCCCHHHHHHHHHHhh
Confidence            5554433211                       111                          123567889999999999


Q ss_pred             cCCCCCC-----CHHHHhcCCCCCCC
Q 013973          409 YDPTDRL-----TAREALRHPFFTRD  429 (433)
Q Consensus       409 ~dP~~R~-----ta~ell~hp~f~~~  429 (433)
                      .||++||     ++.|+++||||+..
T Consensus       242 ~dP~~R~g~~~~~~~ei~~h~~f~~~  267 (337)
T 1o6l_A          242 KDPKQRLGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             SSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             cCHHHhcCCCCCCHHHHHcCCCcCCC
Confidence            9999999     89999999999864

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=2e-51  Score=395.58  Aligned_cols=251  Identities=25%  Similarity=0.417  Sum_probs=213.4

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .++|++++.||+|+||.||+|+++.+|+.||+|++++..    ...+....|+.+++.+     .|+||+++++++.+..
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~Iv~~~~~~~~~~   79 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-----THPFIIRMWGTFQDAQ   79 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-----CBTTBCCEEEEEECSS
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhC-----CCCCCceEeEEEEeCC
Confidence            367999999999999999999999999999999997432    2234556788887776     6799999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+|+||||+ |++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++                 
T Consensus        80 ~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~-----------------  140 (318)
T 1fot_A           80 QIFMIMDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLD-----------------  140 (318)
T ss_dssp             EEEEEECCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEEC-----------------
T ss_pred             EEEEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEc-----------------
Confidence            999999999 899999998764  799999999999999999999999999999999999994                 


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                                .++.+||+|||++..........+||+.|+|||++.+..|+.++|||||||++|||++|..||.+.+..+
T Consensus       141 ----------~~g~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~  210 (318)
T 1fot_A          141 ----------KNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK  210 (318)
T ss_dssp             ----------TTSCEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred             ----------CCCCEEEeecCcceecCCccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH
Confidence                      4556777777777655544455689999999999999999999999999999999999999998877665


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      .+..+...                       ...                          ++..++.++.+||.+||+.|
T Consensus       211 ~~~~i~~~-----------------------~~~--------------------------~p~~~~~~~~~li~~lL~~d  241 (318)
T 1fot_A          211 TYEKILNA-----------------------ELR--------------------------FPPFFNEDVKDLLSRLITRD  241 (318)
T ss_dssp             HHHHHHHC-----------------------CCC--------------------------CCTTSCHHHHHHHHHHTCSC
T ss_pred             HHHHHHhC-----------------------CCC--------------------------CCCCCCHHHHHHHHHHhccC
Confidence            55443221                       111                          12356778999999999999


Q ss_pred             CCCCC-----CHHHHhcCCCCCCC
Q 013973          411 PTDRL-----TAREALRHPFFTRD  429 (433)
Q Consensus       411 P~~R~-----ta~ell~hp~f~~~  429 (433)
                      |++||     +++|+++||||++.
T Consensus       242 p~~R~~~~~~~~~~i~~hp~f~~~  265 (318)
T 1fot_A          242 LSQRLGNLQNGTEDVKNHPWFKEV  265 (318)
T ss_dssp             TTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred             HHHcCCCcCCCHHHHhcCccccCC
Confidence            99999     89999999999864

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.1e-51  Score=401.28  Aligned_cols=281  Identities=27%  Similarity=0.499  Sum_probs=225.5

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC-
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR-  170 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~-  170 (433)
                      +.++|++++.||+|+||.||+|.+..+|+.||||++...   ....+.+.+|+.+++.+     .|+||+++++++... 
T Consensus        23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~l~~~~~~~~   97 (367)
T 1cm8_A           23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-----RHENVIGLLDVFTPDE   97 (367)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-----CBTTBCCCSEEECSCS
T ss_pred             ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-----CCcCCCCceeeEecCC
Confidence            457899999999999999999999999999999998532   23455677899999988     578999999998765 


Q ss_pred             -----CeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcC
Q 013973          171 -----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  245 (433)
Q Consensus       171 -----~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~  245 (433)
                           ..+|+||||++++|.+++...   .+++..+..++.||+.||+|||++||+||||||+|||++            
T Consensus        98 ~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~------------  162 (367)
T 1cm8_A           98 TLDDFTDFYLVMPFMGTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN------------  162 (367)
T ss_dssp             STTTCCCCEEEEECCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC------------
T ss_pred             ccccCceEEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEc------------
Confidence                 356999999999999999873   699999999999999999999999999999999999994            


Q ss_pred             CCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCC
Q 013973          246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                                     .++.+||+|||+++.........+||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus       163 ---------------~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~  227 (367)
T 1cm8_A          163 ---------------EDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFK  227 (367)
T ss_dssp             ---------------TTCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ---------------CCCCEEEEeeecccccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCC
Confidence                           4556777777777765554555689999999999987 679999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCCHHHHHHHhhhh-hhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          325 THENLEHLAMMERVLGPLPQHMLKRVDRHA-EKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       325 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      +.+..+++..+....|..+.+....+.... ..++..- ...+.                  ..........++++.+||
T Consensus       228 ~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~------------------~~~~~~~~~~~~~~~~ll  288 (367)
T 1cm8_A          228 GSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGL-PELEK------------------KDFASILTNASPLAVNLL  288 (367)
T ss_dssp             CSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHS-CCCCC------------------CCGGGTCTTCCHHHHHHH
T ss_pred             CCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhC-CCCCC------------------CCHHHHCCCCCHHHHHHH
Confidence            999999999999999999988776553222 1221110 00000                  001112345678999999


Q ss_pred             HhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          404 QGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      .+||+.||++|||+.|+|+||||++.
T Consensus       289 ~~mL~~dP~~R~t~~e~l~hp~f~~~  314 (367)
T 1cm8_A          289 EKMLVLDAEQRVTAGEALAHPYFESL  314 (367)
T ss_dssp             HHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             HHHccCChhHCCCHHHHhcChHHHhh
Confidence            99999999999999999999999864

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=4.1e-51  Score=397.50  Aligned_cols=252  Identities=25%  Similarity=0.381  Sum_probs=210.3

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .++|++.+.||+|+||.||+|+++.+++.||||++++..    ........|..++..+.    .|++|+++++++.+.+
T Consensus        16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~----~hp~iv~l~~~~~~~~   91 (345)
T 1xjd_A           16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW----EHPFLTHMFCTFQTKE   91 (345)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHT----TCTTBCCEEEEEECSS
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcC----CCCCCCcEEEEEEeCC
Confidence            467999999999999999999999999999999997532    23445667888887662    5688999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+|+||||+ ||+|.+++...+  .+++..+..++.||+.||+|||++|||||||||+|||++.+|              
T Consensus        92 ~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g--------------  155 (345)
T 1xjd_A           92 NLFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG--------------  155 (345)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS--------------
T ss_pred             EEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCC--------------
Confidence            999999999 899999998764  799999999999999999999999999999999999995544              


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCC---CCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                                   .+||+|||++.....   .....+||+.|+|||++.+..|+.++|||||||++|||++|..||.+.+
T Consensus       156 -------------~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~  222 (345)
T 1xjd_A          156 -------------HIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD  222 (345)
T ss_dssp             -------------CEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             -------------CEEEeEChhhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCC
Confidence                         566666665543221   2234689999999999999999999999999999999999999999877


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ..+.+..+...                       ...                          .+..++.++.+||.+||
T Consensus       223 ~~~~~~~i~~~-----------------------~~~--------------------------~p~~~s~~~~~li~~lL  253 (345)
T 1xjd_A          223 EEELFHSIRMD-----------------------NPF--------------------------YPRWLEKEAKDLLVKLF  253 (345)
T ss_dssp             HHHHHHHHHHC-----------------------CCC--------------------------CCTTSCHHHHHHHHHHS
T ss_pred             HHHHHHHHHhC-----------------------CCC--------------------------CCcccCHHHHHHHHHHh
Confidence            66655443221                       111                          12346778999999999


Q ss_pred             ccCCCCCCCHH-HHhcCCCCCCC
Q 013973          408 RYDPTDRLTAR-EALRHPFFTRD  429 (433)
Q Consensus       408 ~~dP~~R~ta~-ell~hp~f~~~  429 (433)
                      +.||++||++. |+++||||+..
T Consensus       254 ~~dp~~R~~~~~~i~~hp~f~~~  276 (345)
T 1xjd_A          254 VREPEKRLGVRGDIRQHPLFREI  276 (345)
T ss_dssp             CSSGGGSBTTBSCGGGSGGGTTC
T ss_pred             cCCHhHcCCChHHHHcCccccCC
Confidence            99999999998 99999999864

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=1e-50  Score=392.20  Aligned_cols=262  Identities=25%  Similarity=0.458  Sum_probs=219.8

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh-------hHHHHHHHHHHHHHHHhcCCCCCceEEecce
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-------YREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  166 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~  166 (433)
                      .+.++|++.+.||+|+||.||+|.++.+++.||+|+++....       ..+.+..|+.+++.+     .|+||++++++
T Consensus         8 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~   82 (326)
T 2y0a_A            8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-----QHPNVITLHEV   82 (326)
T ss_dssp             CHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHC-----CCTTBCCEEEE
T ss_pred             CcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhC-----CCCCCCcEEEE
Confidence            455789999999999999999999999999999999864321       346678899999998     67999999999


Q ss_pred             eecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcC
Q 013973          167 FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  245 (433)
Q Consensus       167 ~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~  245 (433)
                      +.....+++||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++         
T Consensus        83 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~---------  151 (326)
T 2y0a_A           83 YENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRN---------  151 (326)
T ss_dssp             EECSSEEEEEEECCCSCBHHHHHTTSS--CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSS---------
T ss_pred             EEeCCEEEEEEEcCCCCCHHHHHHhcC--CcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCC---------
Confidence            99999999999999 899999997654  799999999999999999999999999999999999996543         


Q ss_pred             CCCCCCCCcccccCCCCCCEEEEecCCccccCCC--CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 013973          246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF  323 (433)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf  323 (433)
                                    .....+||+|||++......  ....+||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       152 --------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf  217 (326)
T 2y0a_A          152 --------------VPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF  217 (326)
T ss_dssp             --------------SSSCCEEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSS
T ss_pred             --------------CCCCCEEEEECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCC
Confidence                          12336888888888654322  23457999999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      .+....+.+..+.......+..                                             .+...+..+.+||
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~li  252 (326)
T 2y0a_A          218 LGDTKQETLANVSAVNYEFEDE---------------------------------------------YFSNTSALAKDFI  252 (326)
T ss_dssp             CCSSHHHHHHHHHHTCCCCCHH---------------------------------------------HHTTSCHHHHHHH
T ss_pred             CCCCHHHHHHHHHhcCCCcCcc---------------------------------------------ccccCCHHHHHHH
Confidence            9877766655544322222211                                             1235677899999


Q ss_pred             HhccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          404 QGLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      .+||+.||++|||+.|+|+||||+...
T Consensus       253 ~~~L~~dP~~Rpt~~e~l~hp~~~~~~  279 (326)
T 2y0a_A          253 RRLLVKDPKKRMTIQDSLQHPWIKPKD  279 (326)
T ss_dssp             HHHSCSSGGGSCCHHHHHHSTTTSCCS
T ss_pred             HHHccCChhhCCCHHHHhcCCCccCCc
Confidence            999999999999999999999998653

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=5.7e-51  Score=397.49  Aligned_cols=251  Identities=27%  Similarity=0.446  Sum_probs=214.6

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .++|++++.||+|+||.||+|+++.+++.||+|+++...    ...+....|+.+++.+     +|++|+++++++.+.+
T Consensus        40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~  114 (350)
T 1rdq_E           40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNS  114 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-----CCTTBCCEEEEEECSS
T ss_pred             HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEEcCC
Confidence            467999999999999999999999999999999997432    2234566788888766     7799999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+|+||||+ |++|.+++...+  .+++..++.++.||+.||+|||++|||||||||+|||++                 
T Consensus       115 ~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~-----------------  175 (350)
T 1rdq_E          115 NLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-----------------  175 (350)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-----------------
T ss_pred             EEEEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEEC-----------------
Confidence            999999999 899999998765  799999999999999999999999999999999999994                 


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                                .++.+||+|||++..........+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+
T Consensus       176 ----------~~g~~kL~DFg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  245 (350)
T 1rdq_E          176 ----------QQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ  245 (350)
T ss_dssp             ----------TTSCEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             ----------CCCCEEEcccccceeccCCcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH
Confidence                      4556777777777665555556789999999999999999999999999999999999999999877666


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      .+..+..                       +...+                          +..++.++.+||.+||+.|
T Consensus       246 ~~~~i~~-----------------------~~~~~--------------------------p~~~~~~~~~li~~lL~~d  276 (350)
T 1rdq_E          246 IYEKIVS-----------------------GKVRF--------------------------PSHFSSDLKDLLRNLLQVD  276 (350)
T ss_dssp             HHHHHHH-----------------------CCCCC--------------------------CTTCCHHHHHHHHHHSCSC
T ss_pred             HHHHHHc-----------------------CCCCC--------------------------CCCCCHHHHHHHHHHhhcC
Confidence            5544332                       11111                          2356778999999999999


Q ss_pred             CCCCCC-----HHHHhcCCCCCCC
Q 013973          411 PTDRLT-----AREALRHPFFTRD  429 (433)
Q Consensus       411 P~~R~t-----a~ell~hp~f~~~  429 (433)
                      |.+||+     ++|+++||||+..
T Consensus       277 p~~R~~~~~~~~~ei~~h~~f~~~  300 (350)
T 1rdq_E          277 LTKRFGNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             TTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred             HHhccCCccCCHHHHHhCcCcCCC
Confidence            999998     9999999999864

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=7.5e-51  Score=386.63  Aligned_cols=280  Identities=28%  Similarity=0.481  Sum_probs=220.3

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      ++|++++.||+|+||+||+|.++.+++.||+|+++..   ......+..|+.+++.+     .|+||+++++++.+.+.+
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~   76 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-----KHKNIVRLHDVLHSDKKL   76 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTC-----CCTTBCCEEEEEEETTEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcC-----CCCCEeeEEeEEEeCCEE
Confidence            5799999999999999999999999999999999643   23345667888888877     678999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       174 ~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      ++||||++++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.                   
T Consensus        77 ~lv~e~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~-------------------  136 (292)
T 3o0g_A           77 TLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINR-------------------  136 (292)
T ss_dssp             EEEEECCSEEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-------------------
T ss_pred             EEEEecCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC-------------------
Confidence            9999999888888877643 47999999999999999999999999999999999999954                   


Q ss_pred             cccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCC-CCCcchhHHHHHHHHHHHhCCCC-CCCCCh
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEAL-FQTHEN  328 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~P-f~~~~~  328 (433)
                              ++.+||+|||.+......   ....+||+.|+|||++.+.. ++.++|||||||++|+|++|..| |.+.+.
T Consensus       137 --------~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~  208 (292)
T 3o0g_A          137 --------NGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV  208 (292)
T ss_dssp             --------TSCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSH
T ss_pred             --------CCCEEEeecccceecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCH
Confidence                    456677777776543322   23347899999999998766 89999999999999999987766 667777


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      .+.+..+....+..+...+.........    .  ..+...              ...........++.++.+||.+||+
T Consensus       209 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~--------------~~~~~~~~~~~~~~~~~~li~~~L~  268 (292)
T 3o0g_A          209 DDQLKRIFRLLGTPTEEQWPSMTKLPDY----K--PYPMYP--------------ATTSLVNVVPKLNATGRDLLQNLLK  268 (292)
T ss_dssp             HHHHHHHHHHHCCCCTTTCTTGGGSTTC----C--CCCCCC--------------TTCCCTTTSTTCCHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHhCCCChhhhhhhcccccc----c--cccccc--------------CCcchhhcccccChHHHHHHHHHhc
Confidence            7888888888887665433322211100    0  000000              0000112234577899999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCC
Q 013973          409 YDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       409 ~dP~~R~ta~ell~hp~f~~~  429 (433)
                      .||++|||++|+|+||||++-
T Consensus       269 ~dP~~R~t~~e~l~hp~f~~~  289 (292)
T 3o0g_A          269 CNPVQRISAEEALQHPYFSDF  289 (292)
T ss_dssp             SSGGGSCCHHHHHTSGGGTTC
T ss_pred             cChhhCCCHHHHhcCcccccC
Confidence            999999999999999999863

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=4.3e-51  Score=404.13  Aligned_cols=314  Identities=25%  Similarity=0.454  Sum_probs=220.2

Q ss_pred             ceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           93 ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        93 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      ..+.++|++++.||+|+||.||+|.++.+++.||||++...   ........+|+.++..+.    +|+||+++++++..
T Consensus         5 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~----~h~niv~l~~~~~~   80 (388)
T 3oz6_A            5 RHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELS----GHENIVNLLNVLRA   80 (388)
T ss_dssp             HHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTT----TCTTBCCEEEEEEC
T ss_pred             CcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhcc----CCCCCCeeeeEEec
Confidence            34568899999999999999999999999999999998532   334455677888888873    37889999999865


Q ss_pred             C--CeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC
Q 013973          170 R--NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       170 ~--~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                      .  ..+|+||||++++|.+++...   .+++..+..++.||+.||+|||+.|||||||||+|||++.++.+||+|||++.
T Consensus        81 ~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~  157 (388)
T 3oz6_A           81 DNDRDVYLVFDYMETDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSR  157 (388)
T ss_dssp             TTSSCEEEEEECCSEEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             CCCCEEEEEecccCcCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccc
Confidence            4  479999999988999999874   69999999999999999999999999999999999999887777777777765


Q ss_pred             CCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                      .................-....+.   .........+||+.|+|||++.+ ..|+.++|||||||++|||++|.+||.+.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~  234 (388)
T 3oz6_A          158 SFVNIRRVTNNIPLSINENTENFD---DDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS  234 (388)
T ss_dssp             ESSSCCCCCCCGGGCCC------------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             cccccccccccccccccccccccc---cccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence            432211100000000000000000   00011133589999999999987 67999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhh-hhhcc-------CcccCCCCccchhhHhhhccchhHHHHH--hhhcCCch
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAE-KYVRR-------GRLDWPEGAASRESIKSVMKLPRLQNLI--MQHVDHSA  396 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  396 (433)
                      +..+++..+...++.++.+.+..+..... .++..       ....+..            ..+......  .......+
T Consensus       235 ~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~  302 (388)
T 3oz6_A          235 STMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRD------------IFTKWKNLLLKINPKADCN  302 (388)
T ss_dssp             SHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCC------------CHHHHHHHHHHHCTTCCCC
T ss_pred             CHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHH------------hCcchhhhcccccccccCC
Confidence            99999999999999888766543321110 00000       0000000            001111111  11223678


Q ss_pred             hHHHHHHHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          397 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       397 ~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      +++.+||.+||+.||++|||++|+|+||||+.
T Consensus       303 ~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~  334 (388)
T 3oz6_A          303 EEALDLLDKLLQFNPNKRISANDALKHPFVSI  334 (388)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTT
T ss_pred             HHHHHHHHHhhccCcccCCCHHHHhCCHHHHH
Confidence            89999999999999999999999999999975

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=1.1e-50  Score=386.70  Aligned_cols=253  Identities=26%  Similarity=0.422  Sum_probs=211.7

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      .++|++.+.||+|+||+||+|.+..+++.||+|++.... ...+.+..|+.+++.+     .|+||+++++++...+.+|
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~~~~   93 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-----KNPNIVNYLDSYLVGDELW   93 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHC-----CCTTBCCEEEEEEETTEEE
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcC-----CCCCCCeEeEEEEECCEEE
Confidence            467999999999999999999999999999999986432 3345677899998887     6799999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +||||+ +++|.+++...   .+++..+..++.||+.||.|||++||+||||||+|||++.                   
T Consensus        94 lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~-------------------  151 (297)
T 3fxz_A           94 VVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM-------------------  151 (297)
T ss_dssp             EEEECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-------------------
T ss_pred             EEEECCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECC-------------------
Confidence            999999 99999999875   5999999999999999999999999999999999999954                   


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                              ++.+||+|||++.......   ...+||+.|+|||++.+..++.++|||||||++|+|++|..||...+...
T Consensus       152 --------~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~  223 (297)
T 3fxz_A          152 --------DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR  223 (297)
T ss_dssp             --------TCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred             --------CCCEEEeeCCCceecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                    4567777777665443322   33579999999999999999999999999999999999999998877665


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+.....+.                    +                          ..+..++..+.+||.+||+.|
T Consensus       224 ~~~~~~~~~~~~--------------------~--------------------------~~~~~~~~~~~~li~~~l~~d  257 (297)
T 3fxz_A          224 ALYLIATNGTPE--------------------L--------------------------QNPEKLSAIFRDFLNRCLEMD  257 (297)
T ss_dssp             HHHHHHHHCSCC--------------------C--------------------------SCGGGSCHHHHHHHHHHSCSS
T ss_pred             HHHHHHhCCCCC--------------------C--------------------------CCccccCHHHHHHHHHHccCC
Confidence            544432211110                    0                          012345678999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCC
Q 013973          411 PTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       411 P~~R~ta~ell~hp~f~~~  429 (433)
                      |++|||+.|+|+||||+..
T Consensus       258 p~~Rps~~ell~h~~~~~~  276 (297)
T 3fxz_A          258 VEKRGSAKELLQHQFLKIA  276 (297)
T ss_dssp             TTTSCCHHHHTTCGGGGGC
T ss_pred             hhHCcCHHHHhhChhhccc
Confidence            9999999999999999854

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=5.3e-51  Score=399.70  Aligned_cols=264  Identities=24%  Similarity=0.414  Sum_probs=219.0

Q ss_pred             eecCceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecc
Q 013973           89 FALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN  165 (433)
Q Consensus        89 ~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~  165 (433)
                      ......+.++|++.+.||+|+||.||+|.++.+++.||+|++...   ....+.+..|+.+++.+     .|+||+++++
T Consensus        21 ~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~~~~   95 (362)
T 2bdw_A           21 MNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-----QHPNIVRLHD   95 (362)
T ss_dssp             ---CCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHC-----CCTTBCCEEE
T ss_pred             ecCCCCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-----CCCCCCeEEE
Confidence            334455677899999999999999999999999999999999743   23445677899999988     6799999999


Q ss_pred             eeecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCc
Q 013973          166 WFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  244 (433)
Q Consensus       166 ~~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg  244 (433)
                      ++.+.+..|+||||+ |++|.+++....  .+++..+..++.||+.||.|||++|||||||||+|||++.++        
T Consensus        96 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~--------  165 (362)
T 2bdw_A           96 SIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA--------  165 (362)
T ss_dssp             EEECSSEEEEEECCCCSCBHHHHHTTCS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSS--------
T ss_pred             EEEeCCEEEEEEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCC--------
Confidence            999999999999999 889999997654  799999999999999999999999999999999999996432        


Q ss_pred             CCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCC
Q 013973          245 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL  322 (433)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P  322 (433)
                                      ....+||+|||++.......  ...+||+.|+|||++.+..|+.++|||||||++|+|++|..|
T Consensus       166 ----------------~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~P  229 (362)
T 2bdw_A          166 ----------------KGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP  229 (362)
T ss_dssp             ----------------TTCCEEECCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             ----------------CCCCEEEeecCcceEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCC
Confidence                            23468888888887654333  235899999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       323 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      |.+.+..+....+......                       ++.                      ..++.++.++.+|
T Consensus       230 f~~~~~~~~~~~i~~~~~~-----------------------~~~----------------------~~~~~~~~~~~~l  264 (362)
T 2bdw_A          230 FWDEDQHRLYAQIKAGAYD-----------------------YPS----------------------PEWDTVTPEAKSL  264 (362)
T ss_dssp             SCCSSHHHHHHHHHHTCCC-----------------------CCT----------------------TGGGGSCHHHHHH
T ss_pred             CCCCCHHHHHHHHHhCCCC-----------------------CCc----------------------ccccCCCHHHHHH
Confidence            9887766655544322111                       111                      0123457789999


Q ss_pred             HHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          403 LQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       403 i~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      |.+||+.||++|||+.|+|+||||..
T Consensus       265 i~~~L~~dP~~R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          265 IDSMLTVNPKKRITADQALKVPWICN  290 (362)
T ss_dssp             HHHHSCSSGGGSCCHHHHTTSHHHHT
T ss_pred             HHHHcCCChhhCcCHHHHhcCcccCC
Confidence            99999999999999999999999964

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=1.3e-50  Score=395.22  Aligned_cols=252  Identities=24%  Similarity=0.347  Sum_probs=207.9

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .++|++++.||+|+||.||+|+++.+++.||||++++..    ...+....|..++..+    .+|++|+++++++++.+
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~----~~hp~iv~l~~~~~~~~   94 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALP----GKPPFLTQLHSCFQTMD   94 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCT----TCCTTBCCEEEEEECSS
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhc----CCCCEEeeEEEEEEcCC
Confidence            367999999999999999999999999999999997532    2234455666666544    36789999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+|+||||+ ||+|.+++...+  .+++..++.++.||+.||+|||++|||||||||+|||++.+|              
T Consensus        95 ~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g--------------  158 (353)
T 2i0e_A           95 RLYFVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG--------------  158 (353)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS--------------
T ss_pred             EEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCC--------------
Confidence            999999999 899999998765  799999999999999999999999999999999999995544              


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCC---CCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                                   .+||+|||++.....   .....+||+.|+|||++.+..|+.++|||||||++|||++|..||.+.+
T Consensus       159 -------------~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~  225 (353)
T 2i0e_A          159 -------------HIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED  225 (353)
T ss_dssp             -------------CEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             -------------cEEEEeCCcccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC
Confidence                         556666665543211   2234589999999999999999999999999999999999999999877


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ..+.+..+...                       .+.                          ++..++.++.+||.+||
T Consensus       226 ~~~~~~~i~~~-----------------------~~~--------------------------~p~~~s~~~~~li~~lL  256 (353)
T 2i0e_A          226 EDELFQSIMEH-----------------------NVA--------------------------YPKSMSKEAVAICKGLM  256 (353)
T ss_dssp             HHHHHHHHHHC-----------------------CCC--------------------------CCTTSCHHHHHHHHHHT
T ss_pred             HHHHHHHHHhC-----------------------CCC--------------------------CCCCCCHHHHHHHHHHh
Confidence            76655443321                       111                          12356778999999999


Q ss_pred             ccCCCCCCC-----HHHHhcCCCCCCC
Q 013973          408 RYDPTDRLT-----AREALRHPFFTRD  429 (433)
Q Consensus       408 ~~dP~~R~t-----a~ell~hp~f~~~  429 (433)
                      +.||.+||+     +.|+++||||+..
T Consensus       257 ~~dP~~R~~~~~~~~~~i~~h~~f~~~  283 (353)
T 2i0e_A          257 TKHPGKRLGCGPEGERDIKEHAFFRYI  283 (353)
T ss_dssp             CSCTTSCTTCSTTHHHHHHTSGGGTTC
T ss_pred             hcCHHHcCCCCCCCHHHHhcCccccCC
Confidence            999999994     7999999999864

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=1.3e-50  Score=400.25  Aligned_cols=261  Identities=20%  Similarity=0.366  Sum_probs=205.5

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .++|++++.||+|+||+||+|+++.+++.||+|++++..    ........|..++.++.    +||+|+++++++.+.+
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~----~hp~Iv~l~~~~~~~~  126 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS----NHPFLVGLHSCFQTES  126 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHT----TCTTBCCEEEEEECSS
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcC----CCCCcCeeEEEEEECC
Confidence            367999999999999999999999999999999997532    22234567888887763    5688999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+|+||||+ ||+|.+++...+  .+++..++.|+.||+.||+|||++|||||||||+|||++.+               
T Consensus       127 ~~~lV~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~---------------  189 (396)
T 4dc2_A          127 RLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE---------------  189 (396)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT---------------
T ss_pred             EEEEEEEcCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCC---------------
Confidence            999999999 899999998764  79999999999999999999999999999999999999544               


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccC---CCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYER---PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                                  +.+||+|||+++...   ......+||+.|+|||++.+..|+.++|||||||++|||++|..||....
T Consensus       190 ------------g~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~  257 (396)
T 4dc2_A          190 ------------GHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG  257 (396)
T ss_dssp             ------------SCEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTT
T ss_pred             ------------CCEEEeecceeeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccc
Confidence                        456666666665321   12234689999999999999999999999999999999999999997533


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ..+....       ...       ......+..+.+                          ..+..++.++.+||.+||
T Consensus       258 ~~~~~~~-------~~~-------~~~~~~i~~~~~--------------------------~~p~~~s~~~~~li~~lL  297 (396)
T 4dc2_A          258 SSDNPDQ-------NTE-------DYLFQVILEKQI--------------------------RIPRSLSVKAASVLKSFL  297 (396)
T ss_dssp             C-------------CCH-------HHHHHHHHHCCC--------------------------CCCTTSCHHHHHHHHHHT
T ss_pred             cccccch-------hhH-------HHHHHHHhcccc--------------------------CCCCcCCHHHHHHHHHHh
Confidence            2110000       000       000000111111                          123467889999999999


Q ss_pred             ccCCCCCCCH------HHHhcCCCCCCC
Q 013973          408 RYDPTDRLTA------REALRHPFFTRD  429 (433)
Q Consensus       408 ~~dP~~R~ta------~ell~hp~f~~~  429 (433)
                      ++||.+||++      +|+++||||++.
T Consensus       298 ~~dP~~R~~~~~~~~~~ei~~Hpff~~i  325 (396)
T 4dc2_A          298 NKDPKERLGCHPQTGFADIQGHPFFRNV  325 (396)
T ss_dssp             CSCTTTSTTCSTTTHHHHHHHSTTTTTC
T ss_pred             cCCHhHcCCCCCCCCHHHHhcCccccCC
Confidence            9999999985      799999999864

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=1.6e-50  Score=406.06  Aligned_cols=259  Identities=25%  Similarity=0.417  Sum_probs=217.4

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      .+.++|++.+.||+|+||.||+|.++.+++.||+|++....   ...+.+..|+.+++.+     .||||+++++++.+.
T Consensus         8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~l~~~~~~~   82 (444)
T 3soa_A            8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL-----KHPNIVRLHDSISEE   82 (444)
T ss_dssp             HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHC-----CBTTBCCEEEEEECS
T ss_pred             cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-----CCcCCCeEEEEEEEC
Confidence            45678999999999999999999999999999999986432   3445677899999988     678999999999999


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      +..|+||||+ ||+|.+++....  .+++..+..++.||+.||.|||++|||||||||+|||++.+              
T Consensus        83 ~~~~lv~E~~~gg~L~~~i~~~~--~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~--------------  146 (444)
T 3soa_A           83 GHHYLIFDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASK--------------  146 (444)
T ss_dssp             SEEEEEECCCBCCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBS--------------
T ss_pred             CEEEEEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecc--------------
Confidence            9999999999 899999998765  79999999999999999999999999999999999999642              


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                                ..++.+||+|||++.......   ...+||+.|+|||++.+..|+.++|||||||++|+|++|.+||.+.
T Consensus       147 ----------~~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~  216 (444)
T 3soa_A          147 ----------LKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDE  216 (444)
T ss_dssp             ----------STTCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             ----------CCCCcEEEccCceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCc
Confidence                      134678888888886554432   2357999999999999999999999999999999999999999988


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      +..+....+.......                       +.                      ..++.+++++.+||.+|
T Consensus       217 ~~~~~~~~i~~~~~~~-----------------------~~----------------------~~~~~~s~~~~~li~~~  251 (444)
T 3soa_A          217 DQHRLYQQIKAGAYDF-----------------------PS----------------------PEWDTVTPEAKDLINKM  251 (444)
T ss_dssp             SHHHHHHHHHHTCCCC-----------------------CT----------------------TTTTTSCHHHHHHHHHH
T ss_pred             cHHHHHHHHHhCCCCC-----------------------Cc----------------------cccccCCHHHHHHHHHH
Confidence            7766665543322211                       11                      11235678899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      |+.||++|||+.|+|+||||+.
T Consensus       252 L~~dP~~Rpta~e~L~hp~~~~  273 (444)
T 3soa_A          252 LTINPSKRITAAEALKHPWISH  273 (444)
T ss_dssp             SCSSTTTSCCHHHHHHSCTTHH
T ss_pred             cCCChhHCCCHHHHhcCccccC
Confidence            9999999999999999999963

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=6e-50  Score=401.43  Aligned_cols=301  Identities=27%  Similarity=0.424  Sum_probs=223.9

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC-
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR-  170 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~-  170 (433)
                      +.++|++++.||+|+||.||+|.++.+++.||||+++..   ....+.+.+|+.+++.+     .|+||+++++++... 
T Consensus        24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~nIv~l~~~~~~~~   98 (432)
T 3n9x_A           24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRL-----KSDYIIRLYDLIIPDD   98 (432)
T ss_dssp             CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHC-----CCTTBCCEEEECCCSC
T ss_pred             ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHc-----CCCCcceEEEEEecCC
Confidence            457899999999999999999999999999999999642   23446677899999998     578999999998765 


Q ss_pred             ----CeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCC
Q 013973          171 ----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  246 (433)
Q Consensus       171 ----~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~  246 (433)
                          ..+|+||||++++|.+++....  .+++..++.++.||+.||+|||++|||||||||+|||++.++.+||+|||++
T Consensus        99 ~~~~~~~~lv~e~~~~~L~~~~~~~~--~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla  176 (432)
T 3n9x_A           99 LLKFDELYIVLEIADSDLKKLFKTPI--FLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLA  176 (432)
T ss_dssp             TTTCCCEEEEEECCSEEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             CCcCCeEEEEEecCCcCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence                6799999999889999998654  7999999999999999999999999999999999999987777777777766


Q ss_pred             CCCCCCCcccccCCCCCCEEEEecCCc-------cccCCCCCceeecCcccchhhhh-CCCCCCcchhHHHHHHHHHHHh
Q 013973          247 LHTPKDSSYFKRMPKSSAIKVIDFGST-------TYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCT  318 (433)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a-------~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DvwSlGv~l~ellt  318 (433)
                      ..........         ...++...       ..........+||+.|+|||++. +..|+.++|||||||++|||++
T Consensus       177 ~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~  247 (432)
T 3n9x_A          177 RTINSEKDTN---------IVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN  247 (432)
T ss_dssp             EEC----------------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHT
T ss_pred             cccccccccc---------ccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHh
Confidence            5443211100         00000000       00001123458999999999874 5669999999999999999998


Q ss_pred             -----------CCCCCCCCC-----------------hHHHHHHHHHHhCCCCHHHHHHHhhh-hhhhhccCcccCCCCc
Q 013973          319 -----------GEALFQTHE-----------------NLEHLAMMERVLGPLPQHMLKRVDRH-AEKYVRRGRLDWPEGA  369 (433)
Q Consensus       319 -----------g~~Pf~~~~-----------------~~~~~~~i~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~  369 (433)
                                 |.++|.+.+                 ..+++..+...+|..+.+.+..+... ...++.......+.  
T Consensus       248 g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~--  325 (432)
T 3n9x_A          248 MLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPI--  325 (432)
T ss_dssp             TCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCC--
T ss_pred             cccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCC--
Confidence                       455555433                 36788889999999988776654221 22222211110000  


Q ss_pred             cchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          370 ASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                                       ......+..++++.+||.+||+.||++|||++|+|+||||++-+
T Consensus       326 -----------------~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  369 (432)
T 3n9x_A          326 -----------------NLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVR  369 (432)
T ss_dssp             -----------------CHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTC
T ss_pred             -----------------CHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhcc
Confidence                             01122346788999999999999999999999999999998653

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=1.6e-50  Score=383.72  Aligned_cols=279  Identities=29%  Similarity=0.469  Sum_probs=216.8

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh---hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK---YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      ++|++++.||+|+||.||+|.+ .+++.||+|++.....   ....+.+|+.+++.+     .|+||+++++++...+.+
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~   75 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKEL-----KHSNIVKLYDVIHTKKRL   75 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGC-----CCTTBCCEEEEEECSSCE
T ss_pred             ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhc-----CCCCEeeeeeEEccCCeE
Confidence            5799999999999999999998 6788999999864322   235667888888877     678999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       174 ~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      ++||||+.++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++                    
T Consensus        76 ~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~--------------------  134 (288)
T 1ob3_A           76 VLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN--------------------  134 (288)
T ss_dssp             EEEEECCSEEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC--------------------
T ss_pred             EEEEEecCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc--------------------
Confidence            9999999889999998653 4699999999999999999999999999999999999994                    


Q ss_pred             cccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCChH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENL  329 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~  329 (433)
                             .++.+||+|||++......   .....||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..
T Consensus       135 -------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~  207 (288)
T 1ob3_A          135 -------REGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA  207 (288)
T ss_dssp             -------TTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             -------CCCCEEEeECccccccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence                   4456777777776543322   1234789999999999764 5899999999999999999999999998888


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +.+..+...++..+...+........ +..  .+....            .     .........++.++.+||.+||+.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~------------~-----~~~~~~~~~~~~~~~~li~~~L~~  267 (288)
T 1ob3_A          208 DQLMRIFRILGTPNSKNWPNVTELPK-YDP--NFTVYE------------P-----LPWESFLKGLDESGIDLLSKMLKL  267 (288)
T ss_dssp             HHHHHHHHHHCCCCTTTSTTGGGSTT-CCT--TCCCCC------------C-----CCGGGTCCSCCHHHHHHHHHHTCS
T ss_pred             HHHHHHHHHHCCCChhhchhhhcccc-ccc--cccccc------------C-----ccHHHHhhhcCHHHHHHHHHHcCC
Confidence            88888888777665433222111100 000  000000            0     000112345788999999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCC
Q 013973          410 DPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       410 dP~~R~ta~ell~hp~f~~~  429 (433)
                      ||++|||++|+|+||||++.
T Consensus       268 dP~~Rpt~~e~l~hp~f~~~  287 (288)
T 1ob3_A          268 DPNQRITAKQALEHAYFKEN  287 (288)
T ss_dssp             STTTSCCHHHHHTSGGGGC-
T ss_pred             CcccCCCHHHHhcCcchhhc
Confidence            99999999999999999875

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=6.1e-50  Score=393.18  Aligned_cols=306  Identities=33%  Similarity=0.554  Sum_probs=238.5

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCC------CCCceEEecceeec
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK------GGNRCVQIRNWFDY  169 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~------~~~~i~~~~~~~~~  169 (433)
                      .++|++++.||+|+||.||+|.+..+++.||||++............|+.+++++.+...      .|+||+++++++..
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~   97 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   97 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence            468999999999999999999999999999999998766667778899999999875421      26789999999876


Q ss_pred             CC----eEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCceEeeccCccccCCCc
Q 013973          170 RN----HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL-CMIHTDLKPENVLLVSSEYIKVPDYK  244 (433)
Q Consensus       170 ~~----~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlKp~NILl~~~~~~~i~dfg  244 (433)
                      .+    .+++|||+++++|.+++.......+++..+..++.||+.||+|||++ |||||||||+|||++.++.       
T Consensus        98 ~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~-------  170 (373)
T 1q8y_A           98 KGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDS-------  170 (373)
T ss_dssp             EETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEET-------
T ss_pred             cCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCC-------
Confidence            54    89999999999999999886656799999999999999999999998 9999999999999965431       


Q ss_pred             CCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 013973          245 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                                    .+....+||+|||++..........+||+.|+|||++.+..++.++|||||||++|||++|..||.
T Consensus       171 --------------~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~  236 (373)
T 1q8y_A          171 --------------PENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE  236 (373)
T ss_dssp             --------------TTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC-
T ss_pred             --------------CcCcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence                          023346899999988766655556689999999999999999999999999999999999999998


Q ss_pred             CCC------hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhH
Q 013973          325 THE------NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  398 (433)
Q Consensus       325 ~~~------~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (433)
                      ..+      ..+.+..+...++.+|..++.........+...+.+.........       ............+...+.+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~  309 (373)
T 1q8y_A          237 PDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFW-------PLEDVLTEKYKFSKDEAKE  309 (373)
T ss_dssp             --------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBC-------CHHHHHHHTTCCCHHHHHH
T ss_pred             CCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhccccccccc-------chhhhhhhcccCCcchHHH
Confidence            654      566788888999999988876554332222222211111000000       0000111111223456778


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          399 LTHLLQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       399 ~~~li~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      +.+||.+||+.||++|||++|+|+||||++.
T Consensus       310 ~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  340 (373)
T 1q8y_A          310 ISDFLSPMLQLDPRKRADAGGLVNHPWLKDT  340 (373)
T ss_dssp             HHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred             HHHHHHHHhccCccccCCHHHHhhChhhhcc
Confidence            9999999999999999999999999999875

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=9.6e-51  Score=390.75  Aligned_cols=286  Identities=29%  Similarity=0.498  Sum_probs=211.7

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ++|++++.||+|+||.||+|.++.+++.||+|+++...  .....+.+|+.+++.+     .|+||+++++++...+.+|
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~~~~   79 (317)
T 2pmi_A            5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL-----KHENIVRLYDVIHTENKLT   79 (317)
T ss_dssp             --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTC-----CBTTBCCEEEEECCTTEEE
T ss_pred             cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhc-----CCCCcceEEEEEEECCeEE
Confidence            57999999999999999999999999999999987432  2335677899998887     6789999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          175 IVFEKLGSSLYDFLRKNN----YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       175 lV~e~~~~~L~~~l~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      +||||+.++|.+++....    ...+++..+..++.||+.||.|||++||+||||||+|||++.                
T Consensus        80 lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~----------------  143 (317)
T 2pmi_A           80 LVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINK----------------  143 (317)
T ss_dssp             EEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT----------------
T ss_pred             EEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcC----------------
Confidence            999999889999987542    135899999999999999999999999999999999999954                


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                                 ++.+||+|||++......   ....+||+.|+|||++.+. .++.++|||||||++|||++|..||.+.
T Consensus       144 -----------~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  212 (317)
T 2pmi_A          144 -----------RGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGT  212 (317)
T ss_dssp             -----------TCCEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             -----------CCCEEECcCccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence                       455677777766543322   1234789999999999874 6899999999999999999999999999


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      +..+.+..+...++..+...+..+....... .    ..+..  ....+.        ..........++.++.+||.+|
T Consensus       213 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~--~~~~~~--------~~~~~~~~~~~~~~l~~li~~~  277 (317)
T 2pmi_A          213 NDEEQLKLIFDIMGTPNESLWPSVTKLPKYN-P----NIQQR--PPRDLR--------QVLQPHTKEPLDGNLMDFLHGL  277 (317)
T ss_dssp             SHHHHHHHHHHHHCSCCTTTCGGGGGCTTCC-T----TCCCC--CCCCSH--------HHHGGGCSSCCCHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHhCCCChhHhhhhhhhhhcc-c----ccccc--cchhHH--------HhhcccccccCCHHHHHHHHHH
Confidence            9999999988888887765544332211100 0    00000  000000        0111122346788999999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      |+.||++|||+.|+|+||||++-
T Consensus       278 L~~dP~~Rpt~~e~l~hp~f~~~  300 (317)
T 2pmi_A          278 LQLNPDMRLSAKQALHHPWFAEY  300 (317)
T ss_dssp             SCSSGGGSCCHHHHTTSGGGGGG
T ss_pred             CCCCcccCCCHHHHhCChhhhcc
Confidence            99999999999999999999853

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=8.5e-51  Score=393.16  Aligned_cols=287  Identities=27%  Similarity=0.462  Sum_probs=220.4

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh---hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK---YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      .++|++++.||+|+||+||+|.+..+++.||||+++....   ....+..|+.+++.+     .|+||+++++++.+.+.
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~  107 (329)
T 3gbz_A           33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKEL-----QHRNIIELKSVIHHNHR  107 (329)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGC-----CCTTBCCEEEEEEETTE
T ss_pred             hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHc-----CCCCcceEEEEEecCCE
Confidence            4679999999999999999999999999999999964322   234456788888877     67899999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          173 ICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       173 ~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      +|+||||+.++|.+++....  .+++..++.++.||+.||.|||++|||||||||+|||++.++.               
T Consensus       108 ~~lv~e~~~~~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~---------------  170 (329)
T 3gbz_A          108 LHLIFEYAENDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDA---------------  170 (329)
T ss_dssp             EEEEEECCSEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC------------------
T ss_pred             EEEEEecCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCC---------------
Confidence            99999999889999998765  6999999999999999999999999999999999999965432               


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                             +....+||+|||++......   ....+||+.|+|||++.+. .++.++|||||||++|||++|..||.+.+.
T Consensus       171 -------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~  243 (329)
T 3gbz_A          171 -------SETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE  243 (329)
T ss_dssp             ---------CCEEEECCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             -------CccceEEECcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCH
Confidence                   34456899999988654422   2335789999999999875 489999999999999999999999999998


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      .+.+..+...++..+...+.........     ...++..           ....   ........++.++.+||.+||+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-----------~~~~---~~~~~~~~~~~~~~~li~~~L~  304 (329)
T 3gbz_A          244 IDQLFKIFEVLGLPDDTTWPGVTALPDW-----KQSFPKF-----------RGKT---LKRVLGALLDDEGLDLLTAMLE  304 (329)
T ss_dssp             HHHHHHHHHHHCCCCTTTSTTGGGSTTC-----CTTCCCC-----------CCCC---HHHHHGGGSCHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhCCCchhhhhhhhhhhhh-----hhhhhhh-----------cccc---HhhhcccccCHHHHHHHHHHcc
Confidence            8888888888776654332221110000     0000000           0000   1111223467889999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCC
Q 013973          409 YDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       409 ~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      .||++|||+.|+|+||||++..
T Consensus       305 ~dP~~R~t~~e~l~hp~f~~~~  326 (329)
T 3gbz_A          305 MDPVKRISAKNALEHPYFSHND  326 (329)
T ss_dssp             SSGGGSCCHHHHHTSGGGSSSC
T ss_pred             CChhhCCCHHHHhCCcccCCCC
Confidence            9999999999999999999764

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=2e-50  Score=396.31  Aligned_cols=282  Identities=27%  Similarity=0.487  Sum_probs=213.0

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      .+.++|++++.||+|+||.||+|.+..+|+.||||++...   ......+.+|+.+++.+     .|+||+++++++...
T Consensus        26 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~~~~~~~~~  100 (367)
T 2fst_X           26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-----KHENVIGLLDVFTPA  100 (367)
T ss_dssp             EEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-----CCTTBCCCSEEECSC
T ss_pred             CCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-----CCCCCCcEEEEEecC
Confidence            3467899999999999999999999999999999998632   23455677899999888     678999999988653


Q ss_pred             ------CeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCc
Q 013973          171 ------NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  244 (433)
Q Consensus       171 ------~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg  244 (433)
                            ..+|+|||+++++|.+++..   ..+++..+..++.||+.||+|||++||+||||||+|||++           
T Consensus       101 ~~~~~~~~~~lv~e~~~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~-----------  166 (367)
T 2fst_X          101 RSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-----------  166 (367)
T ss_dssp             SSGGGCCCCEEEEECCCEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC-----------
T ss_pred             CccccCCeEEEEecccCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEEC-----------
Confidence                  67899999999999999875   3699999999999999999999999999999999999994           


Q ss_pred             CCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCC
Q 013973          245 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF  323 (433)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf  323 (433)
                                      .++.+||+|||+++.........+||+.|+|||++.+ ..++.++|||||||++|||++|..||
T Consensus       167 ----------------~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf  230 (367)
T 2fst_X          167 ----------------EDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF  230 (367)
T ss_dssp             ----------------TTCCEEECC---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSC
T ss_pred             ----------------CCCCEEEeeccccccccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCC
Confidence                            4456777777777655444455689999999999987 67999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhh-hhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHA-EKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      .+.+..+++..+.+.+|.++.+.+..+.... ..++..- ...+..                  .........++++.+|
T Consensus       231 ~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~-~~~~~~------------------~~~~~~~~~~~~~~dL  291 (367)
T 2fst_X          231 PGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL-TQMPKM------------------NFANVFIGANPLAVDL  291 (367)
T ss_dssp             CCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTS-CCCCCC------------------CHHHHTTTCCHHHHHH
T ss_pred             CCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhcc-CCCCCC------------------CHHHHCCCCCHHHHHH
Confidence            9999999999999999998887766543221 1222110 000000                  0111234567889999


Q ss_pred             HHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          403 LQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       403 i~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      |.+||+.||.+|||+.|+|+||||++.
T Consensus       292 l~~mL~~dP~~R~t~~e~L~hp~~~~~  318 (367)
T 2fst_X          292 LEKMLVLDSDKRITAAQALAHAYFAQY  318 (367)
T ss_dssp             HHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             HHHhCCCCcccCcCHHHHhcChhhhhc
Confidence            999999999999999999999999864

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=8.8e-51  Score=392.20  Aligned_cols=282  Identities=27%  Similarity=0.472  Sum_probs=218.4

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhH--HHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYR--EAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~--~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ++|++++.||+|+||.||+|.+..+++.||+|+++......  ..+..|+.+++.+     .|+||+++++++...+.++
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~   76 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL-----KHANIVTLHDIIHTEKSLT   76 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCC-----CCTTBCCEEEEEECSSCEE
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhc-----CCCCCCeeeeEEeeCCEEE
Confidence            56999999999999999999999999999999986432211  1234588888777     6789999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          175 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       175 lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      +||||++++|.+++...+ ..+++..+..++.||+.||.|||++||+||||||+|||++.                    
T Consensus        77 lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~--------------------  135 (324)
T 3mtl_A           77 LVFEYLDKDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINE--------------------  135 (324)
T ss_dssp             EEEECCSEEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECT--------------------
T ss_pred             EEecccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECC--------------------
Confidence            999999889999998764 46999999999999999999999999999999999999954                    


Q ss_pred             ccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                             ++.+||+|||++.......   ...+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+
T Consensus       136 -------~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~  208 (324)
T 3mtl_A          136 -------RGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE  208 (324)
T ss_dssp             -------TCCEEECSSSEEECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             -------CCCEEEccCcccccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                   4456777777665433221   23478999999999987 568999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      .+..+...++..+...+...........    +.++..               ...........++.++.+||.+||+.|
T Consensus       209 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---------------~~~~~~~~~~~~~~~~~~li~~~L~~d  269 (324)
T 3mtl_A          209 QLHFIFRILGTPTEETWPGILSNEEFKT----YNYPKY---------------RAEALLSHAPRLDSDGADLLTKLLQFE  269 (324)
T ss_dssp             HHHHHHHHHCCCCTTTSTTGGGCHHHHH----TCCCCC---------------CCCCHHHHCTTSCHHHHHHHHHHSCSS
T ss_pred             HHHHHHHHhCCCChHhchhhhcchhhcc----cccccc---------------cchhhhhhcCCCCHHHHHHHHHHcCcC
Confidence            9999999888876654332211110000    000000               001112234567889999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCCC
Q 013973          411 PTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       411 P~~R~ta~ell~hp~f~~~~  430 (433)
                      |++|||++|+|+||||++..
T Consensus       270 P~~R~t~~e~l~hp~f~~~~  289 (324)
T 3mtl_A          270 GRNRISAEDAMKHPFFLSLG  289 (324)
T ss_dssp             GGGSCCHHHHTTSGGGGGGC
T ss_pred             cccCCCHHHHhcChhhhhcc
Confidence            99999999999999997654

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=6.9e-50  Score=389.15  Aligned_cols=261  Identities=21%  Similarity=0.369  Sum_probs=205.1

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .++|++++.||+|+||.||+|+++.+++.||+|++++..    ........|..+++++.    +|++|+++++++.+.+
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~----~hp~iv~l~~~~~~~~   83 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS----NHPFLVGLHSCFQTES   83 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTT----TCTTBCCEEEEEECSS
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcC----CCCccCeEEEEEEeCC
Confidence            367999999999999999999999999999999997432    23345667888877652    5688999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+|+||||+ |++|.+++...+  .+++..++.++.||+.||+|||++|||||||||+|||++.+               
T Consensus        84 ~~~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~---------------  146 (345)
T 3a8x_A           84 RLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE---------------  146 (345)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT---------------
T ss_pred             EEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCC---------------
Confidence            999999999 899999998764  79999999999999999999999999999999999999544               


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCC---CCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                                  +.+||+|||++.....   .....+||+.|+|||++.+..|+.++|||||||++|||++|..||....
T Consensus       147 ------------g~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  214 (345)
T 3a8x_A          147 ------------GHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG  214 (345)
T ss_dssp             ------------SCEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTT
T ss_pred             ------------CCEEEEeccccccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcc
Confidence                        4566666666653211   1234589999999999999999999999999999999999999997532


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      .......              .........+..+...                          .+..++.++.+||.+||
T Consensus       215 ~~~~~~~--------------~~~~~~~~~i~~~~~~--------------------------~p~~~s~~~~~li~~lL  254 (345)
T 3a8x_A          215 SSDNPDQ--------------NTEDYLFQVILEKQIR--------------------------IPRSLSVKAASVLKSFL  254 (345)
T ss_dssp             C---------------------CHHHHHHHHHHCCCC--------------------------CCTTSCHHHHHHHHHHT
T ss_pred             ccccccc--------------ccHHHHHHHHHcCCCC--------------------------CCCCCCHHHHHHHHHHh
Confidence            1110000              0000000001111111                          23356788999999999


Q ss_pred             ccCCCCCCCH------HHHhcCCCCCCC
Q 013973          408 RYDPTDRLTA------REALRHPFFTRD  429 (433)
Q Consensus       408 ~~dP~~R~ta------~ell~hp~f~~~  429 (433)
                      +.||.+||++      .|+++||||++.
T Consensus       255 ~~dP~~R~~~~~~~~~~~i~~hp~f~~~  282 (345)
T 3a8x_A          255 NKDPKERLGCHPQTGFADIQGHPFFRNV  282 (345)
T ss_dssp             CSSTTTSTTCCTTTHHHHHHTSGGGTTC
T ss_pred             cCCHhHCCCCCCcCCHHHHhcCCccCCC
Confidence            9999999995      899999999864

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=1.9e-50  Score=401.20  Aligned_cols=254  Identities=24%  Similarity=0.416  Sum_probs=210.4

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh----hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .++|++++.||+|+||+||+|+++.+++.||+|++++...    ....+..|+.+++.+     +|++|+++++++.+.+
T Consensus        68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l-----~hp~Iv~l~~~~~~~~  142 (410)
T 3v8s_A           68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-----NSPWVVQLFYAFQDDR  142 (410)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHC-----CCTTBCCEEEEEECSS
T ss_pred             ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEEECC
Confidence            4689999999999999999999999999999999974321    223366788888887     7799999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+||||||+ ||+|.+++...   .+++..++.++.||+.||+|||++|||||||||+|||++.+               
T Consensus       143 ~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~---------------  204 (410)
T 3v8s_A          143 YLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS---------------  204 (410)
T ss_dssp             EEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT---------------
T ss_pred             EEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCC---------------
Confidence            999999999 99999999764   59999999999999999999999999999999999999544               


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCC----CCCcchhHHHHHHHHHHHhCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLG----WTYPCDIWSVGCILVELCTGEAL  322 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlGv~l~elltg~~P  322 (433)
                                  +.+||+|||++.......    ...+||+.|+|||++.+..    |+.++|||||||++|||++|..|
T Consensus       205 ------------g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~P  272 (410)
T 3v8s_A          205 ------------GHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP  272 (410)
T ss_dssp             ------------SCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCT
T ss_pred             ------------CCEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCC
Confidence                        456666666665433322    2458999999999998765    88999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       323 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      |.+.+..+.+..+.....                     .+.+|.                        ...++.++++|
T Consensus       273 f~~~~~~~~~~~i~~~~~---------------------~~~~p~------------------------~~~~s~~~~~l  307 (410)
T 3v8s_A          273 FYADSLVGTYSKIMNHKN---------------------SLTFPD------------------------DNDISKEAKNL  307 (410)
T ss_dssp             TCCSSHHHHHHHHHTHHH---------------------HCCCCT------------------------TCCCCHHHHHH
T ss_pred             CCCCChhhHHHHHHhccc---------------------cccCCC------------------------cccccHHHHHH
Confidence            998877766655432110                     001111                        12567899999


Q ss_pred             HHhccccCCCC--CCCHHHHhcCCCCCCC
Q 013973          403 LQGLLRYDPTD--RLTAREALRHPFFTRD  429 (433)
Q Consensus       403 i~~~L~~dP~~--R~ta~ell~hp~f~~~  429 (433)
                      |.+||+.+|.+  |++++|+++||||+..
T Consensus       308 i~~lL~~~~~rlgR~~~~ei~~Hp~f~~~  336 (410)
T 3v8s_A          308 ICAFLTDREVRLGRNGVEEIKRHLFFKND  336 (410)
T ss_dssp             HHHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred             HHHHccChhhhCCCCCHHHHhcCccccCC
Confidence            99999999998  9999999999999874

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=4.1e-50  Score=394.42  Aligned_cols=252  Identities=27%  Similarity=0.406  Sum_probs=202.8

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhh----HHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY----REAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .++|++++.||+|+||.||+|+++.+++.||||++++....    ......|..++    .....|++|+++++.+.+.+
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~l----l~~~~hp~Iv~l~~~~~~~~  112 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVL----LKNVKHPFLVGLHFSFQTAD  112 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CC----BCCCCCTTBCCEEEEEECSS
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHH----HHhCCCCCCCCEEEEEEeCC
Confidence            46799999999999999999999999999999999754321    12223333331    12347899999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+|+||||+ ||+|.+++...+  .+++..++.++.||+.||+|||++|||||||||+|||++.                
T Consensus       113 ~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~----------------  174 (373)
T 2r5t_A          113 KLYFVLDYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDS----------------  174 (373)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT----------------
T ss_pred             EEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECC----------------
Confidence            999999999 899999998764  7999999999999999999999999999999999999954                


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccC---CCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYER---PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                                 ++.+||+|||++....   ......+||+.|+|||++.+..|+.++|||||||++|||++|..||.+.+
T Consensus       175 -----------~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~  243 (373)
T 2r5t_A          175 -----------QGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN  243 (373)
T ss_dssp             -----------TSCEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB
T ss_pred             -----------CCCEEEeeCccccccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC
Confidence                       4456666666665322   12244689999999999999999999999999999999999999999877


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ..+.+..+...                       .+.                          .+..++.++.+||.+||
T Consensus       244 ~~~~~~~i~~~-----------------------~~~--------------------------~~~~~~~~~~~li~~lL  274 (373)
T 2r5t_A          244 TAEMYDNILNK-----------------------PLQ--------------------------LKPNITNSARHLLEGLL  274 (373)
T ss_dssp             HHHHHHHHHHS-----------------------CCC--------------------------CCSSSCHHHHHHHHHHT
T ss_pred             HHHHHHHHHhc-----------------------ccC--------------------------CCCCCCHHHHHHHHHHc
Confidence            66655443321                       111                          12356778999999999


Q ss_pred             ccCCCCCCCH----HHHhcCCCCCCC
Q 013973          408 RYDPTDRLTA----REALRHPFFTRD  429 (433)
Q Consensus       408 ~~dP~~R~ta----~ell~hp~f~~~  429 (433)
                      +.||.+||++    .|+++||||+..
T Consensus       275 ~~dp~~R~~~~~~~~~i~~h~~f~~~  300 (373)
T 2r5t_A          275 QKDRTKRLGAKDDFMEIKSHVFFSLI  300 (373)
T ss_dssp             CSSGGGSTTTTTTHHHHHTSGGGTTC
T ss_pred             ccCHHhCCCCCCCHHHHhCCccccCC
Confidence            9999999986    699999999864

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=5.6e-50  Score=390.93  Aligned_cols=260  Identities=27%  Similarity=0.401  Sum_probs=212.3

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh------hHHHHHHHHHHHHHHHhcCCCCCceEEeccee
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK------YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  167 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~  167 (433)
                      .+.++|++.+.||+|+||.||+|.++.+++.||||++.....      ..+.+.+|+.+++.+     .|+||+++++++
T Consensus        21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~~~~~~   95 (351)
T 3c0i_A           21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-----KHPHIVELLETY   95 (351)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHC-----CCTTBCCEEEEE
T ss_pred             ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhC-----CCCCCCcEEEEE
Confidence            345789999999999999999999999999999999863221      246678899999988     679999999999


Q ss_pred             ecCCeEEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCc
Q 013973          168 DYRNHICIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  244 (433)
Q Consensus       168 ~~~~~~~lV~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg  244 (433)
                      .+.+.+|+||||+ |++|.+++...  ....+++..+..++.||+.||+|||++|||||||||+|||++.++        
T Consensus        96 ~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~--------  167 (351)
T 3c0i_A           96 SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKE--------  167 (351)
T ss_dssp             EETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSS--------
T ss_pred             EeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCC--------
Confidence            9999999999999 89999887643  223589999999999999999999999999999999999996432        


Q ss_pred             CCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCC
Q 013973          245 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA  321 (433)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~  321 (433)
                                      ....+||+|||++.......   ...+||+.|+|||++.+..|+.++|||||||++|+|++|..
T Consensus       168 ----------------~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~  231 (351)
T 3c0i_A          168 ----------------NSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCL  231 (351)
T ss_dssp             ----------------TTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             ----------------CCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCC
Confidence                            23458888888886554332   23579999999999999999999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       322 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      ||.+.. .+....+.......+.                                             ..+..++.++.+
T Consensus       232 pf~~~~-~~~~~~i~~~~~~~~~---------------------------------------------~~~~~~s~~~~~  265 (351)
T 3c0i_A          232 PFYGTK-ERLFEGIIKGKYKMNP---------------------------------------------RQWSHISESAKD  265 (351)
T ss_dssp             SSCSSH-HHHHHHHHHTCCCCCH---------------------------------------------HHHTTSCHHHHH
T ss_pred             CCCCcH-HHHHHHHHcCCCCCCc---------------------------------------------cccccCCHHHHH
Confidence            998643 2222222111111110                                             112356788999


Q ss_pred             HHHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          402 LLQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       402 li~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      ||.+||+.||++|||+.|+|+||||++
T Consensus       266 li~~~L~~dP~~R~s~~e~l~hp~~~~  292 (351)
T 3c0i_A          266 LVRRMLMLDPAERITVYEALNHPWLKE  292 (351)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred             HHHHHCCCChhHCcCHHHHhcChhhcC
Confidence            999999999999999999999999975

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=3.2e-50  Score=402.56  Aligned_cols=258  Identities=23%  Similarity=0.387  Sum_probs=211.0

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh----hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      ..++|+++++||+|+||+||+|+++.+++.||+|++++...    ....+..|+.++..+     +|++|+++++++.+.
T Consensus        72 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~-----~hp~Iv~l~~~~~~~  146 (437)
T 4aw2_A           72 HREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-----DSKWITTLHYAFQDD  146 (437)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHS-----CTTTBCCEEEEEECS
T ss_pred             ChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhC-----CCCCEEEEEEEEeeC
Confidence            35789999999999999999999999999999999974321    122367788888877     678999999999999


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      +.+||||||+ ||+|.+++.... ..+++..++.++.||+.||+|||++|||||||||+|||++.               
T Consensus       147 ~~~~lV~Ey~~gg~L~~~l~~~~-~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~---------------  210 (437)
T 4aw2_A          147 NNLYLVMDYYVGGDLLTLLSKFE-DRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM---------------  210 (437)
T ss_dssp             SEEEEEECCCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT---------------
T ss_pred             CEEEEEEecCCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcC---------------
Confidence            9999999999 999999998743 47999999999999999999999999999999999999954               


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhh-----CCCCCCcchhHHHHHHHHHHHhCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGE  320 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~  320 (433)
                                  ++.+||+|||++.......    ...+||+.|+|||++.     ...|+.++|||||||++|||++|.
T Consensus       211 ------------~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~  278 (437)
T 4aw2_A          211 ------------NGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE  278 (437)
T ss_dssp             ------------TSCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSS
T ss_pred             ------------CCCEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCC
Confidence                        4456666666664333222    2358999999999997     456999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHH
Q 013973          321 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  400 (433)
Q Consensus       321 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (433)
                      .||.+.+..+.+..+.....                     .+.+|.                       ....++++++
T Consensus       279 ~Pf~~~~~~~~~~~i~~~~~---------------------~~~~p~-----------------------~~~~~s~~~~  314 (437)
T 4aw2_A          279 TPFYAESLVETYGKIMNHKE---------------------RFQFPT-----------------------QVTDVSENAK  314 (437)
T ss_dssp             CTTCCSSHHHHHHHHHTHHH---------------------HCCCCS-----------------------SCCCSCHHHH
T ss_pred             CCCCCCChhHHHHhhhhccc---------------------cccCCc-----------------------ccccCCHHHH
Confidence            99998887776655432110                     011111                       1134678999


Q ss_pred             HHHHhccccCCCC--CCCHHHHhcCCCCCCC
Q 013973          401 HLLQGLLRYDPTD--RLTAREALRHPFFTRD  429 (433)
Q Consensus       401 ~li~~~L~~dP~~--R~ta~ell~hp~f~~~  429 (433)
                      +||.+||+.+|++  |++++|+++||||+..
T Consensus       315 dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i  345 (437)
T 4aw2_A          315 DLIRRLICSREHRLGQNGIEDFKKHPFFSGI  345 (437)
T ss_dssp             HHHHTTSSCGGGCTTTTTTHHHHTSGGGTTC
T ss_pred             HHHHHHhcccccccCCCCHHHHhCCCccCCC
Confidence            9999999999888  9999999999999864

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=4.8e-50  Score=395.83  Aligned_cols=260  Identities=26%  Similarity=0.485  Sum_probs=217.3

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      +.++|++++.||+|+||.||+|.++.+++.||+|++.... .....+..|+.+++.+     .|+||+++++++.+...+
T Consensus        49 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~~~~~~~~~~~~  123 (387)
T 1kob_A           49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL-----HHPKLINLHDAFEDKYEM  123 (387)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-----CSTTBCCEEEEEECSSEE
T ss_pred             cccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhC-----CCcCCCeEEEEEEeCCEE
Confidence            4578999999999999999999999999999999997532 3345677899998877     678999999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      ++||||+ |++|.+++.... ..+++..+..++.||+.||+|||++|||||||||+|||++.                  
T Consensus       124 ~lv~E~~~gg~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~------------------  184 (387)
T 1kob_A          124 VLILEFLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET------------------  184 (387)
T ss_dssp             EEEEECCCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS------------------
T ss_pred             EEEEEcCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEec------------------
Confidence            9999999 899999987543 46999999999999999999999999999999999999953                  


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                             +..+.+||+|||++.......  ...+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+
T Consensus       185 -------~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~  257 (387)
T 1kob_A          185 -------KKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE  257 (387)
T ss_dssp             -------TTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH
T ss_pred             -------CCCCceEEEecccceecCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH
Confidence                   234568888888887654433  23579999999999999999999999999999999999999999877766


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      .+..+.....                       ..+.                      ..+..++.++.+||.+||+.|
T Consensus       258 ~~~~i~~~~~-----------------------~~~~----------------------~~~~~~s~~~~~li~~~L~~d  292 (387)
T 1kob_A          258 TLQNVKRCDW-----------------------EFDE----------------------DAFSSVSPEAKDFIKNLLQKE  292 (387)
T ss_dssp             HHHHHHHCCC-----------------------CCCS----------------------STTTTSCHHHHHHHHTTSCSS
T ss_pred             HHHHHHhCCC-----------------------CCCc----------------------cccccCCHHHHHHHHHHcCCC
Confidence            5544332111                       1111                      012356778999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCCC
Q 013973          411 PTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       411 P~~R~ta~ell~hp~f~~~~  430 (433)
                      |++|||+.|+|+||||+...
T Consensus       293 P~~Rpt~~ell~hp~~~~~~  312 (387)
T 1kob_A          293 PRKRLTVHDALEHPWLKGDH  312 (387)
T ss_dssp             GGGSCCHHHHHTSTTTSSCC
T ss_pred             hhHCcCHHHHhhCccccCCc
Confidence            99999999999999998653

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=4.6e-49  Score=377.48  Aligned_cols=282  Identities=31%  Similarity=0.552  Sum_probs=221.5

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      .++|++++.||+|+||.||+|.+..+++.||+|++....   ...+.+..|+.+++++     .|+||+++++++...+.
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~   76 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQL-----KHPNLVNLLEVFRRKRR   76 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEEETTE
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhC-----CCCCccchhheeecCCe
Confidence            367999999999999999999999999999999885432   2345567899999988     67899999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      .++||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++                  
T Consensus        77 ~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~------------------  136 (311)
T 4agu_A           77 LHLVFEYCDHTVLHELDRYQR--GVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILIT------------------  136 (311)
T ss_dssp             EEEEEECCSEEHHHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC------------------
T ss_pred             EEEEEEeCCCchHHHHHhhhc--CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEc------------------
Confidence            99999999 677777776543  799999999999999999999999999999999999994                  


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                               .++.+||+|||.+.......   ...+||+.|+|||++.+ ..++.++||||||+++|+|++|..||.+.+
T Consensus       137 ---------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  207 (311)
T 4agu_A          137 ---------KHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKS  207 (311)
T ss_dssp             ---------TTSCEEECCCTTCEECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             ---------CCCCEEEeeCCCchhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence                     44567777777765443222   23478999999999986 568999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ..+....+...++..++.........  .+........+.....                ........+.++.+||.+||
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~li~~~L  269 (311)
T 4agu_A          208 DVDQLYLIRKTLGDLIPRHQQVFSTN--QYFSGVKIPDPEDMEP----------------LELKFPNISYPALGLLKGCL  269 (311)
T ss_dssp             HHHHHHHHHHHHCSCCHHHHHHHHTC--GGGTTCCCCCCSSCCC----------------HHHHCTTCCHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhcccccccccccccc--cccccCcCCCccccch----------------hhhhcccccHHHHHHHHHHc
Confidence            99999999998888877654433221  1111111111111100                01122467788999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCC
Q 013973          408 RYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       408 ~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      +.||++|||++|+|+||||++.
T Consensus       270 ~~dP~~Rpt~~ell~hp~f~~~  291 (311)
T 4agu_A          270 HMDPTERLTCEQLLHHPYFENI  291 (311)
T ss_dssp             CSSTTTSCCHHHHHTSGGGTTC
T ss_pred             cCChhhcCCHHHHhcChHHHhc
Confidence            9999999999999999999875

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.5e-50  Score=392.13  Aligned_cols=253  Identities=26%  Similarity=0.400  Sum_probs=208.3

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      ...++|++.+.||+|+||.||+|.+..+++.||+|++....    .....+.+|+.+++.+     .|+||+++++++..
T Consensus         6 ~~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~l~~~~~~   80 (336)
T 3h4j_B            6 RHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-----RHPHIIKLYDVITT   80 (336)
T ss_dssp             SEETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTC-----CCTTBCCEEEEEEC
T ss_pred             cccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhC-----CCCCCCeEEEEEEe
Confidence            34578999999999999999999999999999999997432    1234577889888877     67999999999999


Q ss_pred             CCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          170 RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       170 ~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      .+.+++||||++|+|.+++...+  .+++..++.++.||+.||.|||++|||||||||+|||++                
T Consensus        81 ~~~~~lv~E~~~g~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~----------------  142 (336)
T 3h4j_B           81 PTDIVMVIEYAGGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLD----------------  142 (336)
T ss_dssp             SSEEEEEECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEEC----------------
T ss_pred             CCEEEEEEECCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEc----------------
Confidence            99999999999999999998765  799999999999999999999999999999999999994                


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCC-CCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                                 .++.+||+|||++.......  ...+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.
T Consensus       143 -----------~~~~~kl~DFG~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~  211 (336)
T 3h4j_B          143 -----------DNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDE  211 (336)
T ss_dssp             -----------TTCCEEECCSSCTBTTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCS
T ss_pred             -----------CCCCEEEEEeccceeccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCc
Confidence                       44567777777765443322  34579999999999998776 68999999999999999999999764


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      ...+..                       ..+..+...                          .++.+++++.+||.+|
T Consensus       212 ~~~~~~-----------------------~~i~~~~~~--------------------------~p~~~s~~~~~li~~~  242 (336)
T 3h4j_B          212 FIPNLF-----------------------KKVNSCVYV--------------------------MPDFLSPGAQSLIRRM  242 (336)
T ss_dssp             SSTTCB-----------------------CCCCSSCCC--------------------------CCTTSCHHHHHHHHTT
T ss_pred             cHHHHH-----------------------HHHHcCCCC--------------------------CcccCCHHHHHHHHHH
Confidence            321110                       011111111                          2335678899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      |+.||.+|||++|+++||||+..
T Consensus       243 L~~dP~~Rpt~~eil~hp~~~~~  265 (336)
T 3h4j_B          243 IVADPMQRITIQEIRRDPWFNVN  265 (336)
T ss_dssp             SCSSGGGSCCHHHHTTCHHHHTT
T ss_pred             cCCChhHCcCHHHHHhChhhccC
Confidence            99999999999999999999754

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=1.7e-49  Score=390.39  Aligned_cols=293  Identities=28%  Similarity=0.489  Sum_probs=230.4

Q ss_pred             CCCCceeecCc---eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCC
Q 013973           83 KDGHYMFALGE---NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKG  156 (433)
Q Consensus        83 ~~~~~~~~~~~---~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~  156 (433)
                      ..+.+......   .+.++|.+.+.||+|+||.||+|.++.+++.||||++...   ......+..|+.+++.+     .
T Consensus        25 ~~g~~~~~~~~~~~~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~   99 (371)
T 4exu_A           25 KKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-----Q   99 (371)
T ss_dssp             CTTEEEEEETTEEEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-----C
T ss_pred             cccceeeeeccceecccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhc-----C
Confidence            34444444433   3578999999999999999999999999999999999742   33456677899999888     6


Q ss_pred             CCceEEecceeecCCeE------EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCce
Q 013973          157 GNRCVQIRNWFDYRNHI------CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENV  230 (433)
Q Consensus       157 ~~~i~~~~~~~~~~~~~------~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NI  230 (433)
                      |+||+++++++...+..      |+||||++++|.+++..    .+++..+..++.||+.||+|||++||+||||||+||
T Consensus       100 h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NI  175 (371)
T 4exu_A          100 HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGM----EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNL  175 (371)
T ss_dssp             CTTBCCCSEEECSCSSSTTCCCCEEEEECCCEEHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGE
T ss_pred             CCCchhhhhheeccCCcccceeEEEEEccccccHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHe
Confidence            78999999999877654      99999998899888732    599999999999999999999999999999999999


Q ss_pred             EeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhC-CCCCCcchhHHH
Q 013973          231 LLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSV  309 (433)
Q Consensus       231 Ll~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSl  309 (433)
                      |++                           .++.+||+|||++..........+||+.|+|||++.+ ..++.++|||||
T Consensus       176 ll~---------------------------~~~~~kL~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diwsl  228 (371)
T 4exu_A          176 AVN---------------------------EDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSV  228 (371)
T ss_dssp             EEC---------------------------TTCCEEECSTTCC--------CTTCCCTTSCHHHHSCCSCCCTTHHHHHH
T ss_pred             EEC---------------------------CCCCEEEEecCcccccccCcCCcccCccccCHHHhcCCCCCCcHHhHHHH
Confidence            994                           4556777777777655555555689999999999987 679999999999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHh
Q 013973          310 GCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM  389 (433)
Q Consensus       310 Gv~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (433)
                      ||++|+|++|..||.+.+..+.+..+....+..+.++...+...............+                  .....
T Consensus       229 G~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~  290 (371)
T 4exu_A          229 GCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTP------------------RKDFT  290 (371)
T ss_dssp             HHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCC------------------CCCHH
T ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCc------------------chhHH
Confidence            999999999999999999999999999999998887765543222111111000000                  00112


Q ss_pred             hhcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          390 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       390 ~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      ..++..++++.+||.+||+.||++|||+.|+|+||||+.-
T Consensus       291 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  330 (371)
T 4exu_A          291 QLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF  330 (371)
T ss_dssp             HHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred             HhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccC
Confidence            2345678899999999999999999999999999999853

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=9.8e-51  Score=403.00  Aligned_cols=262  Identities=27%  Similarity=0.481  Sum_probs=200.5

Q ss_pred             ecCcEEEE-eeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec----
Q 013973           95 LTSRYKIH-SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY----  169 (433)
Q Consensus        95 ~~~~~~~~-~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~----  169 (433)
                      +.++|.+. +.||+|+||+||+|.++.+++.||||+++..    .....|+.++.++.    +|+||+++++++..    
T Consensus        59 ~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~E~~~~~~~~----~hp~iv~l~~~~~~~~~~  130 (400)
T 1nxk_A           59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRAS----QCPHIVRIVDVYENLYAG  130 (400)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHT----TSTTBCCEEEEEEEEETT
T ss_pred             ccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc----hhHHHHHHHHHHhc----CCCCcceEeEEEeecccC
Confidence            34668877 7899999999999999999999999999743    33556777776553    56889999998875    


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      ...+||||||+ ||+|.+++.......+++..+..++.||+.||.|||++|||||||||+|||++..             
T Consensus       131 ~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~-------------  197 (400)
T 1nxk_A          131 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK-------------  197 (400)
T ss_dssp             EEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-------------
T ss_pred             CcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecC-------------
Confidence            67899999999 8899999987655679999999999999999999999999999999999999642             


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                                 ..++.+||+|||++.......  ...+||+.|+|||++.+..|+.++|||||||++|||++|..||.+.
T Consensus       198 -----------~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  266 (400)
T 1nxk_A          198 -----------RPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN  266 (400)
T ss_dssp             -----------STTCCEEECCCTTCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred             -----------CCCccEEEEecccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCC
Confidence                       124678888888876544322  3458999999999999999999999999999999999999999765


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      ......           ..+..        .+..+.+..+.                      ..+..++.++.+||.+|
T Consensus       267 ~~~~~~-----------~~~~~--------~i~~~~~~~~~----------------------~~~~~~s~~~~~li~~~  305 (400)
T 1nxk_A          267 HGLAIS-----------PGMKT--------RIRMGQYEFPN----------------------PEWSEVSEEVKMLIRNL  305 (400)
T ss_dssp             TTCSSC-----------CSHHH--------HHHHTCCCCCT----------------------TTTTTSCHHHHHHHHTT
T ss_pred             cccccc-----------HHHHH--------HHHcCcccCCC----------------------cccccCCHHHHHHHHHH
Confidence            432100           00000        01112122111                      01235678899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      |+.||++|||+.|+|+||||.+.
T Consensus       306 L~~dP~~Rpt~~eil~hp~~~~~  328 (400)
T 1nxk_A          306 LKTEPTQRMTITEFMNHPWIMQS  328 (400)
T ss_dssp             SCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             CCCChhHCcCHHHHhcCccccCC
Confidence            99999999999999999999754

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=5e-50  Score=384.68  Aligned_cols=258  Identities=23%  Similarity=0.332  Sum_probs=201.8

Q ss_pred             eeecCceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEec
Q 013973           88 MFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIR  164 (433)
Q Consensus        88 ~~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~  164 (433)
                      +...++.+.++|+++++||+|+||+||+|++..+++.||||++...   .........|+..+..+    ..|+||++++
T Consensus        48 p~~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~----~~h~~iv~l~  123 (311)
T 3p1a_A           48 PSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKV----GQHPCCVRLE  123 (311)
T ss_dssp             TTSSSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHH----CCCTTBCCEE
T ss_pred             CCCccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHh----cCCCcEEEEE
Confidence            3444556678899999999999999999999999999999998532   22233334455444444    2568899999


Q ss_pred             ceeecCCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCc
Q 013973          165 NWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  244 (433)
Q Consensus       165 ~~~~~~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg  244 (433)
                      +++.+.+.+|+||||++++|.+++...+ ..+++..+..++.||+.||+|||++|||||||||+|||++.++        
T Consensus       124 ~~~~~~~~~~lv~e~~~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~--------  194 (311)
T 3p1a_A          124 QAWEEGGILYLQTELCGPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRG--------  194 (311)
T ss_dssp             EEEEETTEEEEEEECCCCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGG--------
T ss_pred             EEEEeCCEEEEEEeccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCC--------
Confidence            9999999999999999999999988764 4699999999999999999999999999999999999995544        


Q ss_pred             CCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCC
Q 013973          245 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL  322 (433)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P  322 (433)
                                         .+||+|||++.......  ....||+.|+|||++.+ .++.++|||||||++|||++|..|
T Consensus       195 -------------------~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~  254 (311)
T 3p1a_A          195 -------------------RCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMEL  254 (311)
T ss_dssp             -------------------CEEECCCTTCEECC------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCC
T ss_pred             -------------------CEEEccceeeeecccCCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCC
Confidence                               56666666655433222  23469999999999886 799999999999999999999776


Q ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       323 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      |.+.+....+.     .+..+                                             ...+..++.++.+|
T Consensus       255 ~~~~~~~~~~~-----~~~~~---------------------------------------------~~~~~~~~~~l~~l  284 (311)
T 3p1a_A          255 PHGGEGWQQLR-----QGYLP---------------------------------------------PEFTAGLSSELRSV  284 (311)
T ss_dssp             CSSHHHHHHHT-----TTCCC---------------------------------------------HHHHTTSCHHHHHH
T ss_pred             CCCccHHHHHh-----ccCCC---------------------------------------------cccccCCCHHHHHH
Confidence            65422211110     00001                                             01224567899999


Q ss_pred             HHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          403 LQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       403 i~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      |.+||+.||++|||+.|+|+||||++
T Consensus       285 i~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          285 LVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             HHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             HHHHcCCChhhCcCHHHHHhCccccC
Confidence            99999999999999999999999986

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=1.1e-49  Score=391.66  Aligned_cols=300  Identities=27%  Similarity=0.461  Sum_probs=223.8

Q ss_pred             CceeecCc---eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCc
Q 013973           86 HYMFALGE---NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNR  159 (433)
Q Consensus        86 ~~~~~~~~---~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~  159 (433)
                      .+.+..++   .+.++|++++.||+|+||.||+|.+..+++.||||++...   ......+..|+.+++.+     .|+|
T Consensus        11 ~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpn   85 (371)
T 2xrw_A           11 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-----NHKN   85 (371)
T ss_dssp             EEEEEETTEEEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHC-----CCTT
T ss_pred             ceEeecCCcccchhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhc-----CCCC
Confidence            34444444   3568999999999999999999999999999999998642   23445677899999888     6789


Q ss_pred             eEEecceeecCC------eEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEee
Q 013973          160 CVQIRNWFDYRN------HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV  233 (433)
Q Consensus       160 i~~~~~~~~~~~------~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~  233 (433)
                      |+++++++...+      .+|+||||+.++|.+++..    .+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus        86 iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~  161 (371)
T 2xrw_A           86 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK  161 (371)
T ss_dssp             BCCEEEEECSCCSTTTCCEEEEEEECCSEEHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC
T ss_pred             ccceEEeeccccccccccceEEEEEcCCCCHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEc
Confidence            999999987654      8999999998899998863    589999999999999999999999999999999999995


Q ss_pred             ccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC--CCceeecCcccchhhhhCCCCCCcchhHHHHH
Q 013973          234 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGC  311 (433)
Q Consensus       234 ~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv  311 (433)
                      .                           ++.+||+|||++......  ....+||+.|+|||++.+..++.++|||||||
T Consensus       162 ~---------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~  214 (371)
T 2xrw_A          162 S---------------------------DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC  214 (371)
T ss_dssp             T---------------------------TSCEEECCCCC----------------CTTCCHHHHTTCCCCTTHHHHHHHH
T ss_pred             C---------------------------CCCEEEEEeecccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHH
Confidence            4                           445666666666543322  12357999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhh
Q 013973          312 ILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH  391 (433)
Q Consensus       312 ~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (433)
                      ++|+|++|..||.+.+..+.+..+...++..+++...........++..... +...  ..+........+.    ....
T Consensus       215 il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~----~~~~  287 (371)
T 2xrw_A          215 IMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPK-YAGY--SFEKLFPDVLFPA----DSEH  287 (371)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCC-CCCC--CHHHHSCGGGSCC----SSHH
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCcc-cccc--chhhhcccccCcc----cccc
Confidence            9999999999999999999999888888888887776665555444433210 1000  0000000000000    0000


Q ss_pred             cCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          392 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       392 ~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      ....+.++++||.+||+.||++|||++|+|+||||+.
T Consensus       288 ~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  324 (371)
T 2xrw_A          288 NKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV  324 (371)
T ss_dssp             HHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             cccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhh
Confidence            1123668999999999999999999999999999974

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=9.4e-50  Score=396.44  Aligned_cols=257  Identities=25%  Similarity=0.375  Sum_probs=208.5

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh----hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      ..++|++++.||+|+||.||+|+++.+++.||||++++...    ....+..|..++..+     +|++|+++++++.+.
T Consensus        59 ~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~-----~hp~Iv~l~~~~~~~  133 (412)
T 2vd5_A           59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG-----DRRWITQLHFAFQDE  133 (412)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHS-----CTTTBCCEEEEEECS
T ss_pred             ChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhc-----CCCCeeeEEEEEeeC
Confidence            35789999999999999999999999999999999974321    223466788888776     678999999999999


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      +.+||||||+ ||+|.+++.+.+ ..+++..++.|+.||+.||+|||++|||||||||+|||++.+              
T Consensus       134 ~~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~--------------  198 (412)
T 2vd5_A          134 NYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRC--------------  198 (412)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT--------------
T ss_pred             CEEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCC--------------
Confidence            9999999999 999999998753 369999999999999999999999999999999999999554              


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhh-------CCCCCCcchhHHHHHHHHHHHh
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVIL-------GLGWTYPCDIWSVGCILVELCT  318 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~-------~~~~~~~~DvwSlGv~l~ellt  318 (433)
                                   +.+||+|||++.......    ...+||+.|+|||++.       ...|+.++|||||||++|||++
T Consensus       199 -------------g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyellt  265 (412)
T 2vd5_A          199 -------------GHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFY  265 (412)
T ss_dssp             -------------SCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHH
T ss_pred             -------------CCEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHh
Confidence                         456666666655433222    2358999999999998       3568999999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhH
Q 013973          319 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  398 (433)
Q Consensus       319 g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (433)
                      |+.||.+.+..+.+..+......                     +.+|                       .....++.+
T Consensus       266 G~~Pf~~~~~~~~~~~i~~~~~~---------------------~~~p-----------------------~~~~~~s~~  301 (412)
T 2vd5_A          266 GQTPFYADSTAETYGKIVHYKEH---------------------LSLP-----------------------LVDEGVPEE  301 (412)
T ss_dssp             SSCTTCCSSHHHHHHHHHTHHHH---------------------CCCC---------------------------CCCHH
T ss_pred             CCCCCCCCCHHHHHHHHHhcccC---------------------cCCC-----------------------ccccCCCHH
Confidence            99999988777665554321000                     0000                       012357789


Q ss_pred             HHHHHHhccccCCCCCC---CHHHHhcCCCCCCC
Q 013973          399 LTHLLQGLLRYDPTDRL---TAREALRHPFFTRD  429 (433)
Q Consensus       399 ~~~li~~~L~~dP~~R~---ta~ell~hp~f~~~  429 (433)
                      +++||.+||+ +|.+|+   +++|+++||||+..
T Consensus       302 ~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i  334 (412)
T 2vd5_A          302 ARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGL  334 (412)
T ss_dssp             HHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTC
T ss_pred             HHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCC
Confidence            9999999999 999985   89999999999864

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=1.1e-49  Score=394.21  Aligned_cols=307  Identities=18%  Similarity=0.234  Sum_probs=210.8

Q ss_pred             CcEEEEeeeecc--ccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           97 SRYKIHSKMGEG--TFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        97 ~~~~~~~~iG~G--~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      ++|++++.||+|  +||.||+|+++.+++.||||+++..   ....+.+..|+.+++.+     .|+||+++++++.+.+
T Consensus        25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~   99 (389)
T 3gni_B           25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF-----NHPNIVPYRATFIADN   99 (389)
T ss_dssp             GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEEETT
T ss_pred             CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhC-----CCCCCCcEeEEEEECC
Confidence            679999999999  9999999999999999999999743   23445667799999988     6799999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+|+||||+ +++|.+++.......+++..+..++.||+.||+|||++|||||||||+|||++.++.++|+|||.+.   
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~---  176 (389)
T 3gni_B          100 ELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNL---  176 (389)
T ss_dssp             EEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCE---
T ss_pred             EEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccce---
Confidence            999999999 8999999988755679999999999999999999999999999999999999766666666665432   


Q ss_pred             CCCcccccCCCCCCEEEEecCCcccc-CCCCCceeecCcccchhhhhC--CCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYE-RPDQNYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                                     .+.+.|..... .......+||+.|+|||++.+  ..|+.++|||||||++|||++|..||.+.+
T Consensus       177 ---------------~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  241 (389)
T 3gni_B          177 ---------------SMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP  241 (389)
T ss_dssp             ---------------ECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             ---------------eeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC
Confidence                           22222221111 112233478999999999987  579999999999999999999999998766


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhcc-chhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK-LPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      ..+....+...  ..+. +........+.+.......... ......+..... ...........+..+++++.+||.+|
T Consensus       242 ~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~  317 (389)
T 3gni_B          242 ATQMLLEKLNG--TVPC-LLDTSTIPAEELTMSPSRSVAN-SGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQC  317 (389)
T ss_dssp             STTHHHHC------------------------------------------------------------CCHHHHHHHHHH
T ss_pred             HHHHHHHHhcC--CCCc-cccccccccccccccccccccc-cccccccccCccccccCCCCCCccccccCHHHHHHHHHH
Confidence            55443322211  1110 0000000000000000000000 000000000000 00001111224456788999999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      |+.||++|||+.|+|+||||++..
T Consensus       318 L~~dP~~Rpta~ell~hp~f~~~~  341 (389)
T 3gni_B          318 LQRNPDARPSASTLLNHSFFKQIK  341 (389)
T ss_dssp             TCSCTTTSCCHHHHTTSGGGGGC-
T ss_pred             hhcCcccCCCHHHHhcCHHHHHHh
Confidence            999999999999999999998653

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=1.7e-50  Score=393.06  Aligned_cols=258  Identities=26%  Similarity=0.465  Sum_probs=209.5

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      .+.++|++.+.||+|+||.||+|.++.+++.||||+++....   ....|++++.++.    .|+||+++++++.+.+.+
T Consensus        19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~----~hp~iv~~~~~~~~~~~~   91 (342)
T 2qr7_A           19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYG----QHPNIITLKDVYDDGKYV   91 (342)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHT----TSTTBCCEEEEEECSSEE
T ss_pred             CccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhc----CCCCcCeEEEEEEcCCEE
Confidence            346789999999999999999999999999999999975432   2345788887773    468899999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      |+||||+ ||+|.+++...+  .+++..+..++.||+.||+|||++|||||||||+|||+.++.                
T Consensus        92 ~lv~E~~~gg~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~----------------  153 (342)
T 2qr7_A           92 YVVTELMKGGELLDKILRQK--FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDES----------------  153 (342)
T ss_dssp             EEEECCCCSCBHHHHHHTCT--TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSS----------------
T ss_pred             EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCC----------------
Confidence            9999999 899999998754  799999999999999999999999999999999999984321                


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC--
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE--  327 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~--  327 (433)
                             .....+||+|||++.......   ...+||+.|+|||++.+..|+.++|||||||++|||++|..||.+..  
T Consensus       154 -------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~  226 (342)
T 2qr7_A          154 -------GNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD  226 (342)
T ss_dssp             -------CSGGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS
T ss_pred             -------CCcCeEEEEECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC
Confidence                   122458888888887544322   34579999999999998889999999999999999999999997632  


Q ss_pred             -hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          328 -NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       328 -~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                       ..+.+..+.                       .+.+..+.                      ..+..++.++.+||.+|
T Consensus       227 ~~~~~~~~i~-----------------------~~~~~~~~----------------------~~~~~~s~~~~~li~~~  261 (342)
T 2qr7_A          227 TPEEILARIG-----------------------SGKFSLSG----------------------GYWNSVSDTAKDLVSKM  261 (342)
T ss_dssp             CHHHHHHHHH-----------------------HCCCCCCS----------------------TTTTTSCHHHHHHHHHH
T ss_pred             CHHHHHHHHc-----------------------cCCcccCc----------------------cccccCCHHHHHHHHHH
Confidence             222222211                       11111111                      12245678999999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      |+.||++|||+.|+++||||.+
T Consensus       262 L~~dP~~R~t~~~il~hp~~~~  283 (342)
T 2qr7_A          262 LHVDPHQRLTAALVLRHPWIVH  283 (342)
T ss_dssp             TCSSTTTSCCHHHHTTSHHHHT
T ss_pred             CCCChhHCcCHHHHhcCCeecC
Confidence            9999999999999999999954

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=9.4e-50  Score=388.98  Aligned_cols=261  Identities=25%  Similarity=0.449  Sum_probs=202.0

Q ss_pred             ceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           93 ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        93 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      +.+.++|++.+.||+|+||.||+|.+..+++.||||+++... ..+.+..|+.+++.+     .|+||+++++++...+.
T Consensus        49 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~  122 (349)
T 2w4o_A           49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRL-----SHPNIIKLKEIFETPTE  122 (349)
T ss_dssp             SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHC-----CCTTBCCEEEEEECSSE
T ss_pred             ccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhC-----CCCCCcceeeeEecCCe
Confidence            345678999999999999999999999999999999997543 345677899999988     67899999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +++||||+ +++|.+++...+  .+++..+..++.||+.||.|||+.||+||||||+|||++..                
T Consensus       123 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~----------------  184 (349)
T 2w4o_A          123 ISLVLELVTGGELFDRIVEKG--YYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATP----------------  184 (349)
T ss_dssp             EEEEECCCCSCBHHHHHTTCS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSS----------------
T ss_pred             EEEEEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecC----------------
Confidence            99999999 899999997654  69999999999999999999999999999999999999531                


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChH
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  329 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~  329 (433)
                              +.++.+||+|||++.......  ...+||+.|+|||++.+..++.++|||||||++|||++|..||......
T Consensus       185 --------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~  256 (349)
T 2w4o_A          185 --------APDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD  256 (349)
T ss_dssp             --------STTCCEEECCCC----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH
T ss_pred             --------CCCCCEEEccCccccccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc
Confidence                    235678888888776543322  3457999999999999999999999999999999999999999876554


Q ss_pred             HH-HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          330 EH-LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       330 ~~-~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      +. +..+..                       +....+.                      ..++.++.++.+||.+||+
T Consensus       257 ~~~~~~i~~-----------------------~~~~~~~----------------------~~~~~~~~~~~~li~~~L~  291 (349)
T 2w4o_A          257 QFMFRRILN-----------------------CEYYFIS----------------------PWWDEVSLNAKDLVRKLIV  291 (349)
T ss_dssp             HHHHHHHHT-----------------------TCCCCCT----------------------TTTTTSCHHHHHHHHTTSC
T ss_pred             HHHHHHHHh-----------------------CCCccCC----------------------chhhhCCHHHHHHHHHHcc
Confidence            32 222111                       1111100                      1123567789999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCC
Q 013973          409 YDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       409 ~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      .||++|||+.|+|+||||+...
T Consensus       292 ~dP~~Rpt~~e~l~hp~~~~~~  313 (349)
T 2w4o_A          292 LDPKKRLTTFQALQHPWVTGKA  313 (349)
T ss_dssp             SSGGGSCCHHHHHHSTTTTSTT
T ss_pred             CChhhCcCHHHHhcCcccCCCc
Confidence            9999999999999999998654

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=1.1e-49  Score=392.33  Aligned_cols=254  Identities=22%  Similarity=0.406  Sum_probs=207.0

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .++|++++.||+|+||.||+|.+..+++.||+|++....    .....+..|+.+++.+     .|+||+++++++.+.+
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l-----~hp~Iv~l~~~~~~~~   88 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL-----EHPFLVNLWYSFQDEE   88 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-----CCTTBCCEEEEEECSS
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhC-----CCCCCCcEEEEEEeCC
Confidence            477999999999999999999999999999999997432    2235567899998887     6799999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+|+||||+ ||+|.+++....  .+++..++.|+.||+.||.|||++|||||||||+|||++.                
T Consensus        89 ~~~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~----------------  150 (384)
T 4fr4_A           89 DMFMVVDLLLGGDLRYHLQQNV--HFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDE----------------  150 (384)
T ss_dssp             EEEEEECCCTTEEHHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT----------------
T ss_pred             EEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECC----------------
Confidence            999999999 999999998754  7999999999999999999999999999999999999954                


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhC---CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILG---LGWTYPCDIWSVGCILVELCTGEALFQT  325 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGv~l~elltg~~Pf~~  325 (433)
                                 ++.+||+|||++.......  ...+||+.|+|||++.+   ..|+.++|||||||++|||++|..||..
T Consensus       151 -----------~g~vkL~DFG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~  219 (384)
T 4fr4_A          151 -----------HGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHI  219 (384)
T ss_dssp             -----------TSCEEECCCTTCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             -----------CCCEEEeccceeeeccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCC
Confidence                       4556677777665443222  34689999999999974   4589999999999999999999999975


Q ss_pred             CChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHh
Q 013973          326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  405 (433)
Q Consensus       326 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  405 (433)
                      .........+...                    .....                          ..+..++.++.+||.+
T Consensus       220 ~~~~~~~~~~~~~--------------------~~~~~--------------------------~~p~~~s~~~~~li~~  253 (384)
T 4fr4_A          220 RSSTSSKEIVHTF--------------------ETTVV--------------------------TYPSAWSQEMVSLLKK  253 (384)
T ss_dssp             CTTSCHHHHHHHH--------------------HHCCC--------------------------CCCTTSCHHHHHHHHH
T ss_pred             CCCccHHHHHHHH--------------------hhccc--------------------------CCCCcCCHHHHHHHHH
Confidence            4322111111100                    00111                          1233567889999999


Q ss_pred             ccccCCCCCCC-HHHHhcCCCCCCC
Q 013973          406 LLRYDPTDRLT-AREALRHPFFTRD  429 (433)
Q Consensus       406 ~L~~dP~~R~t-a~ell~hp~f~~~  429 (433)
                      ||+.||.+||+ ++++++||||++.
T Consensus       254 lL~~dP~~R~s~~~~l~~hp~f~~~  278 (384)
T 4fr4_A          254 LLEPNPDQRFSQLSDVQNFPYMNDI  278 (384)
T ss_dssp             HSCSSGGGSCCSHHHHHTSGGGTTC
T ss_pred             HhcCCHhHhcccHHHHHcChhhhcC
Confidence            99999999998 9999999999864

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=6e-50  Score=392.15  Aligned_cols=258  Identities=26%  Similarity=0.396  Sum_probs=201.9

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      .++|++++.||+|+||+||+|+++.+++.||||++.......+.+.+|+.+++.+     .|+||+++++++.+.+.+|+
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~~~~~~l   93 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSL-----RHPNIVRFKEVILTPTHLAI   93 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHC-----CCTTBCCEEEEEECSSEEEE
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhC-----CCCCCCcEEEEEeeCCEEEE
Confidence            3679999999999999999999999999999999986655567788899999888     67999999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      ||||+ +++|.+++...+  .+++..++.++.||+.||+|||++||+||||||+|||++.++                  
T Consensus        94 v~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~------------------  153 (361)
T 3uc3_A           94 IMEYASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSP------------------  153 (361)
T ss_dssp             EEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSS------------------
T ss_pred             EEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC------------------
Confidence            99999 899999998765  799999999999999999999999999999999999995432                  


Q ss_pred             ccccCCCCCCEEEEecCCccccCC--CCCceeecCcccchhhhhCCCCCCc-chhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERP--DQNYIVSTRHYRAPEVILGLGWTYP-CDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                             ...+||+|||++.....  .....+||+.|+|||++.+..++.+ +|||||||++|+|++|..||.+.+....
T Consensus       154 -------~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  226 (361)
T 3uc3_A          154 -------APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD  226 (361)
T ss_dssp             -------SCCEEECCCCCC---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC
T ss_pred             -------CceEEEeecCccccccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH
Confidence                   23478888887763222  2234579999999999998888755 8999999999999999999986543221


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      ...+...                   +.......|.                        ...+++++.+||.+||+.||
T Consensus       227 ~~~~~~~-------------------~~~~~~~~~~------------------------~~~~s~~~~~li~~~L~~dP  263 (361)
T 3uc3_A          227 YRKTIQR-------------------ILSVKYSIPD------------------------DIRISPECCHLISRIFVADP  263 (361)
T ss_dssp             HHHHHHH-------------------HHTTCCCCCT------------------------TSCCCHHHHHHHHHHSCSCT
T ss_pred             HHHHHHH-------------------HhcCCCCCCC------------------------cCCCCHHHHHHHHHHccCCh
Confidence            1111110                   0011111111                        12457789999999999999


Q ss_pred             CCCCCHHHHhcCCCCCC
Q 013973          412 TDRLTAREALRHPFFTR  428 (433)
Q Consensus       412 ~~R~ta~ell~hp~f~~  428 (433)
                      ++|||+.|+++||||.+
T Consensus       264 ~~Rps~~ell~hp~f~~  280 (361)
T 3uc3_A          264 ATRISIPEIKTHSWFLK  280 (361)
T ss_dssp             TTSCCHHHHHTSHHHHT
T ss_pred             hHCcCHHHHHhCcchhc
Confidence            99999999999999954

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=2.2e-49  Score=382.98  Aligned_cols=251  Identities=23%  Similarity=0.390  Sum_probs=202.9

Q ss_pred             cCcEEEEeeeeccccEEEEEEEEC---CCCeEEEEEEeecch-----hhHHHHHHHHHHHHHHHhcCCCCCceEEeccee
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDR---ERKEMVAIKIVRGIK-----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  167 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~---~~~~~vAiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~  167 (433)
                      .++|++++.||+|+||.||+|++.   .+++.||+|+++...     .....+..|+.+++.+     .|+||+++++++
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~   90 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV-----KHPFIVDLIYAF   90 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHC-----CCTTBCCEEEEE
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhC-----CCCCccceeEEE
Confidence            467999999999999999999985   688999999997432     2334466789999888     679999999999


Q ss_pred             ecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCC
Q 013973          168 DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  246 (433)
Q Consensus       168 ~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~  246 (433)
                      ...+.+|+||||+ |++|.+++...+  .+++..+..++.||+.||.|||++|||||||||+|||++.+           
T Consensus        91 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~-----------  157 (327)
T 3a62_A           91 QTGGKLYLILEYLSGGELFMQLEREG--IFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQ-----------  157 (327)
T ss_dssp             ECSSCEEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTT-----------
T ss_pred             EcCCEEEEEEeCCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCC-----------
Confidence            9999999999999 899999998764  79999999999999999999999999999999999999544           


Q ss_pred             CCCCCCCcccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 013973          247 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF  323 (433)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf  323 (433)
                                      +.+||+|||++......   ....+||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       158 ----------------~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf  221 (327)
T 3a62_A          158 ----------------GHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF  221 (327)
T ss_dssp             ----------------SCEEECCCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             ----------------CcEEEEeCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCC
Confidence                            45666666665432211   23357999999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      .+.+..+....+.....                       .                          .+..++.++.+||
T Consensus       222 ~~~~~~~~~~~i~~~~~-----------------------~--------------------------~p~~~~~~~~~li  252 (327)
T 3a62_A          222 TGENRKKTIDKILKCKL-----------------------N--------------------------LPPYLTQEARDLL  252 (327)
T ss_dssp             CCSSHHHHHHHHHHTCC-----------------------C--------------------------CCTTSCHHHHHHH
T ss_pred             CCCCHHHHHHHHHhCCC-----------------------C--------------------------CCCCCCHHHHHHH
Confidence            98776655544332111                       1                          1234577899999


Q ss_pred             HhccccCCCCCC-----CHHHHhcCCCCCCC
Q 013973          404 QGLLRYDPTDRL-----TAREALRHPFFTRD  429 (433)
Q Consensus       404 ~~~L~~dP~~R~-----ta~ell~hp~f~~~  429 (433)
                      .+||+.||.+||     ++.|+++||||+..
T Consensus       253 ~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~  283 (327)
T 3a62_A          253 KKLLKRNAASRLGAGPGDAGEVQAHPFFRHI  283 (327)
T ss_dssp             HHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred             HHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence            999999999999     89999999999864

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.1e-49  Score=391.45  Aligned_cols=280  Identities=28%  Similarity=0.549  Sum_probs=222.1

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee------
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD------  168 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~------  168 (433)
                      ..++|++++.||+|+||+||+|.+..+++.||||++......   ..+|+.+++.+     .|+||+++++++.      
T Consensus         5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~---~~~E~~il~~l-----~hpnIv~l~~~~~~~~~~~   76 (383)
T 3eb0_A            5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY---KNRELDIMKVL-----DHVNIIKLVDYFYTTGDEE   76 (383)
T ss_dssp             -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS---CCHHHHHHTTC-----CCTTBCCEEEEEEEC----
T ss_pred             ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch---HHHHHHHHHHc-----CCCCccchhheeeecCccc
Confidence            346899999999999999999999999999999998644322   23588888877     6799999999883      


Q ss_pred             --------------------------------cCCeEEEEEecCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHH
Q 013973          169 --------------------------------YRNHICIVFEKLGSSLYDFLRK--NNYRSFPIDLVREIARQLLECIAF  214 (433)
Q Consensus       169 --------------------------------~~~~~~lV~e~~~~~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~  214 (433)
                                                      ...++++||||+.++|.+.+..  .....+++..+..++.||+.||.|
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~  156 (383)
T 3eb0_A           77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF  156 (383)
T ss_dssp             ---------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence                                            3445899999998898888764  223579999999999999999999


Q ss_pred             HHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC--CCceeecCcccch
Q 013973          215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAP  292 (433)
Q Consensus       215 LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aP  292 (433)
                      ||++||+||||||+|||++.                          .++.+||+|||++......  .....||+.|+||
T Consensus       157 LH~~gi~H~Dikp~Nil~~~--------------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aP  210 (383)
T 3eb0_A          157 IHSLGICHRDIKPQNLLVNS--------------------------KDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAP  210 (383)
T ss_dssp             HHTTTEECSCCCGGGEEEET--------------------------TTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCH
T ss_pred             HHHCcCccCccCHHHEEEcC--------------------------CCCcEEEEECCCCcccCCCCCCcCcccCCCccCH
Confidence            99999999999999999952                          3456777777777644322  2345789999999


Q ss_pred             hhhhCCC-CCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccc
Q 013973          293 EVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAAS  371 (433)
Q Consensus       293 E~~~~~~-~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  371 (433)
                      |++.+.. ++.++|||||||++|||++|..||.+.+..+.+..+...+|..+.+.+.........      ..+|...  
T Consensus       211 E~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~------~~~~~~~--  282 (383)
T 3eb0_A          211 ELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTE------VRFPTLK--  282 (383)
T ss_dssp             HHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--------CCCCCCC--
T ss_pred             HHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCccccc------ccCCccC--
Confidence            9998754 899999999999999999999999999999999999999999887766554322111      1111100  


Q ss_pred             hhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          372 RESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                                  ...+....+...+.++.+||.+||+.||++|||+.|+|+||||++
T Consensus       283 ------------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  327 (383)
T 3eb0_A          283 ------------AKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDH  327 (383)
T ss_dssp             ------------CCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHH
T ss_pred             ------------cccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHH
Confidence                        011122234567889999999999999999999999999999963

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=5.5e-49  Score=379.03  Aligned_cols=262  Identities=26%  Similarity=0.458  Sum_probs=218.6

Q ss_pred             ceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh-------hHHHHHHHHHHHHHHHhcCCCCCceEEecc
Q 013973           93 ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-------YREAAMIEIEVLQQLAKHDKGGNRCVQIRN  165 (433)
Q Consensus        93 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~  165 (433)
                      ..+.++|++.+.||+|+||.||+|.++.+++.||+|+++....       ..+.+..|+.+++.+     .|+||+++++
T Consensus         8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~   82 (321)
T 2a2a_A            8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-----LHHNVITLHD   82 (321)
T ss_dssp             SCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHC-----CCTTBCCEEE
T ss_pred             hhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhC-----CCCCcceEEE
Confidence            3456789999999999999999999999999999999964321       346678899999988     6789999999


Q ss_pred             eeecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCc
Q 013973          166 WFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  244 (433)
Q Consensus       166 ~~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg  244 (433)
                      ++...+.+++||||+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.++        
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~--------  152 (321)
T 2a2a_A           83 VYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN--------  152 (321)
T ss_dssp             EEECSSEEEEEECCCCSCBHHHHHHTCS--CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTT--------
T ss_pred             EEecCCEEEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCC--------
Confidence            999999999999999 899999998654  799999999999999999999999999999999999996543        


Q ss_pred             CCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCC
Q 013973          245 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL  322 (433)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P  322 (433)
                                     .....+||+|||++.......  ....||+.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus       153 ---------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  217 (321)
T 2a2a_A          153 ---------------IPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP  217 (321)
T ss_dssp             ---------------SSSCCEEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCS
T ss_pred             ---------------CCcCCEEEccCccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCC
Confidence                           112268888888876544332  335799999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       323 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      |.+....+....+.......+..                                             .+...+..+.+|
T Consensus       218 f~~~~~~~~~~~i~~~~~~~~~~---------------------------------------------~~~~~~~~~~~l  252 (321)
T 2a2a_A          218 FLGDTKQETLANITSVSYDFDEE---------------------------------------------FFSHTSELAKDF  252 (321)
T ss_dssp             SCCSSHHHHHHHHHTTCCCCCHH---------------------------------------------HHTTCCHHHHHH
T ss_pred             CCCCCHHHHHHHHHhcccccChh---------------------------------------------hhcccCHHHHHH
Confidence            98877766555443322222211                                             123567789999


Q ss_pred             HHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          403 LQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       403 i~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      |.+||+.||++|||+.|+++||||+..
T Consensus       253 i~~~l~~dp~~Rps~~e~l~hp~~~~~  279 (321)
T 2a2a_A          253 IRKLLVKETRKRLTIQEALRHPWITPV  279 (321)
T ss_dssp             HHTTSCSSTTTSCCHHHHHHSTTTSCS
T ss_pred             HHHHcCCChhhCcCHHHHhcCccccCC
Confidence            999999999999999999999999864

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=8.4e-50  Score=385.24  Aligned_cols=255  Identities=24%  Similarity=0.371  Sum_probs=204.1

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      .++|++++.||+|+||+||+|++..+++.||+|++....  ...+.+..|+.+++.+     .|+||+++++++.+.+..
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~~~~~~~~~~~~   80 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-----NHENVVKFYGHRREGNIQ   80 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHC-----CCTTBCCEEEEEECSSEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhC-----CCCCCCeEEEEEecCCeE
Confidence            467999999999999999999999999999999986432  2335677899999888     678999999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      |+||||+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.                  
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~------------------  140 (323)
T 3tki_A           81 YLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE------------------  140 (323)
T ss_dssp             EEEEECCTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT------------------
T ss_pred             EEEEEcCCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeC------------------
Confidence            9999999 889999987653  6999999999999999999999999999999999999954                  


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhCCCC-CCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                               ++.+||+|||++......     ....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||...
T Consensus       141 ---------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~  211 (323)
T 3tki_A          141 ---------RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP  211 (323)
T ss_dssp             ---------TCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSS
T ss_pred             ---------CCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCC
Confidence                     455677777766533211     123579999999999998775 77899999999999999999999765


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      ...........                     ... ..                        ...+..++.++.+||.+|
T Consensus       212 ~~~~~~~~~~~---------------------~~~-~~------------------------~~~~~~~~~~~~~li~~~  245 (323)
T 3tki_A          212 SDSCQEYSDWK---------------------EKK-TY------------------------LNPWKKIDSAPLALLHKI  245 (323)
T ss_dssp             CTTSHHHHHHH---------------------TTC-TT------------------------STTGGGSCHHHHHHHHHH
T ss_pred             chHHHHHHHHh---------------------ccc-cc------------------------CCccccCCHHHHHHHHHH
Confidence            44221111000                     000 00                        001124567899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      |+.||++|||+.|+++||||++..
T Consensus       246 L~~dP~~R~t~~eil~h~~~~~~~  269 (323)
T 3tki_A          246 LVENPSARITIPDIKKDRWYNKPL  269 (323)
T ss_dssp             SCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred             ccCChhhCcCHHHHhhChhhcccc
Confidence            999999999999999999998653

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=8.4e-49  Score=384.44  Aligned_cols=280  Identities=29%  Similarity=0.518  Sum_probs=224.3

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC---
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR---  170 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~---  170 (433)
                      .++|++++.||+|+||.||+|.+..+++.||||++...  ......+..|+.+++.+     .|+||+++++++...   
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~  100 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF-----RHENIIGINDIIRAPTIE  100 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHC-----CCTTBCCCCEEECCSSTT
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhc-----CCCCCccceeEEecCCcc
Confidence            46899999999999999999999999999999999742  33446677899999988     678999999988654   


Q ss_pred             --CeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          171 --NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       171 --~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                        ..+|+||||++++|.+++...   .+++..+..++.||+.||+|||++|||||||||+|||++.              
T Consensus       101 ~~~~~~iv~e~~~~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~--------------  163 (364)
T 3qyz_A          101 QMKDVYIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--------------  163 (364)
T ss_dssp             TCCCEEEEEECCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT--------------
T ss_pred             ccceEEEEEcccCcCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECC--------------
Confidence              479999999988999999764   5999999999999999999999999999999999999954              


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCC------CCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPD------QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEA  321 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~  321 (433)
                                   ++.+||+|||++......      ....+||+.|+|||++.+ ..++.++|||||||++|+|++|..
T Consensus       164 -------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~  230 (364)
T 3qyz_A          164 -------------TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP  230 (364)
T ss_dssp             -------------TCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSC
T ss_pred             -------------CCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCC
Confidence                         445666666666543322      123479999999998765 458999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhh-hhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHH
Q 013973          322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAE-KYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  400 (433)
Q Consensus       322 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (433)
                      ||.+.+..+.+..+...++..+.+.+........ .+...    .+....               ..........+.++.
T Consensus       231 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---------------~~~~~~~~~~~~~~~  291 (364)
T 3qyz_A          231 IFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS----LPHKNK---------------VPWNRLFPNADSKAL  291 (364)
T ss_dssp             SSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHT----SCCCCC---------------CCHHHHCTTSCHHHH
T ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHh----cCCccC---------------CCHHHhCCCCCHHHH
Confidence            9999999999999999999988776554321111 11100    000000               001122346678999


Q ss_pred             HHHHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          401 HLLQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       401 ~li~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      +||.+||+.||++|||+.|+|+||||++.
T Consensus       292 ~li~~~L~~dP~~R~t~~e~l~hp~~~~~  320 (364)
T 3qyz_A          292 DLLDKMLTFNPHKRIEVEQALAHPYLEQY  320 (364)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHTSGGGTTT
T ss_pred             HHHHHHcCCChhhCCCHHHHhcCcchhhc
Confidence            99999999999999999999999999864

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=2.4e-49  Score=395.60  Aligned_cols=279  Identities=28%  Similarity=0.498  Sum_probs=220.2

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec------
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY------  169 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~------  169 (433)
                      ..+|++.+.||+|+||.||+|++..+++.||||++.....   ...+|+++++.+     .|+||+++++++..      
T Consensus        53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~E~~il~~l-----~hpniv~l~~~~~~~~~~~~  124 (420)
T 1j1b_A           53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---FKNRELQIMRKL-----DHCNIVRLRYFFYSSGEKKD  124 (420)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHHTC-----CCTTBCCEEEEEEEEETTTT
T ss_pred             cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHc-----CCCCccceeeEEeccCCCCc
Confidence            3469999999999999999999999999999999864332   234688998887     67899999888743      


Q ss_pred             CCeEEEEEecCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC
Q 013973          170 RNHICIVFEKLGSSLYDFLRK--NNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       170 ~~~~~lV~e~~~~~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                      ..++++||||+.++|.+.+..  .....+++..++.++.||+.||+|||++|||||||||+|||++.+            
T Consensus       125 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~------------  192 (420)
T 1j1b_A          125 EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD------------  192 (420)
T ss_dssp             EEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETT------------
T ss_pred             ceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCC------------
Confidence            235789999998888877653  223579999999999999999999999999999999999999632            


Q ss_pred             CCCCCCcccccCCCCCCEEEEecCCccccCCC--CCceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCC
Q 013973          248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                                    ...+||+|||+++.....  ....+||+.|+|||++.+. .|+.++|||||||++|||++|+.||.
T Consensus       193 --------------~~~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~  258 (420)
T 1j1b_A          193 --------------TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP  258 (420)
T ss_dssp             --------------TTEEEECCCTTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             --------------CCeEEeccchhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCC
Confidence                          234677777777643322  2345789999999999875 79999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHH
Q 013973          325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  404 (433)
Q Consensus       325 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  404 (433)
                      +.+..+.+..+.+.+|..+.+.+.........      +.+|....              ..+...+....+.++.+||.
T Consensus       259 ~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~------~~~p~~~~--------------~~~~~~~~~~~~~~~~~Li~  318 (420)
T 1j1b_A          259 GDSGVDQLVEIIKVLGTPTREQIREMNPNYTE------FKFPQIKA--------------HPWTKVFRPRTPPEAIALCS  318 (420)
T ss_dssp             CSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCC------CCCCCCCC--------------CCHHHHSCTTSCHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHhCCCCHHHHHhhChhhhh------hccCccCC--------------CCHHHhcCCCCCHHHHHHHH
Confidence            99999999999999998887766544322111      11111000              01111223456789999999


Q ss_pred             hccccCCCCCCCHHHHhcCCCCCC
Q 013973          405 GLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       405 ~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      +||++||.+|||+.|+|+||||++
T Consensus       319 ~~L~~dP~~R~t~~e~l~hp~f~~  342 (420)
T 1j1b_A          319 RLLEYTPTARLTPLEACAHSFFDE  342 (420)
T ss_dssp             HHSCSSGGGSCCHHHHHTSGGGGG
T ss_pred             HhccCChhHCCCHHHHhCCHhhcc
Confidence            999999999999999999999964

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=1.4e-49  Score=400.52  Aligned_cols=251  Identities=25%  Similarity=0.418  Sum_probs=202.6

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .++|++++.||+|+||.||+|.+..+++.||||+++...    .....+..|+.+++.+     .|+||+.+++++...+
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~l~~~~~~~~  221 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-----RHPFLTALKYSFQTHD  221 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCC-----SCTTSCCEEEEEEETT
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhC-----CCCeEeeEEEEEeeCC
Confidence            467999999999999999999999999999999997432    2223344566666555     6789999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      .+||||||+ +++|.+++....  .+++..+..++.||+.||+|||+ .|||||||||+|||++.+              
T Consensus       222 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~--------------  285 (446)
T 4ejn_A          222 RLCFVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD--------------  285 (446)
T ss_dssp             EEEEEECCCSSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSS--------------
T ss_pred             EEEEEEeeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCC--------------
Confidence            999999999 889999998764  79999999999999999999998 999999999999999544              


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                                   +.+||+|||++......   ....+||+.|+|||++.+..|+.++|||||||++|||++|..||.+.
T Consensus       286 -------------~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~  352 (446)
T 4ejn_A          286 -------------GHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ  352 (446)
T ss_dssp             -------------SCEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             -------------CCEEEccCCCceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCC
Confidence                         45666666666532221   23458999999999999999999999999999999999999999887


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      +..+....+....                       ..                          .+..+++++.+||.+|
T Consensus       353 ~~~~~~~~i~~~~-----------------------~~--------------------------~p~~~~~~~~~li~~~  383 (446)
T 4ejn_A          353 DHEKLFELILMEE-----------------------IR--------------------------FPRTLGPEAKSLLSGL  383 (446)
T ss_dssp             SHHHHHHHHHHCC-----------------------CC--------------------------CCTTSCHHHHHHHHHH
T ss_pred             CHHHHHHHHHhCC-----------------------CC--------------------------CCccCCHHHHHHHHHH
Confidence            7665554432211                       11                          1235677899999999


Q ss_pred             cccCCCCCC-----CHHHHhcCCCCCCC
Q 013973          407 LRYDPTDRL-----TAREALRHPFFTRD  429 (433)
Q Consensus       407 L~~dP~~R~-----ta~ell~hp~f~~~  429 (433)
                      |+.||.+||     ++.|+++||||+..
T Consensus       384 L~~dP~~R~~~~~~t~~ell~hp~f~~~  411 (446)
T 4ejn_A          384 LKKDPKQRLGGGSEDAKEIMQHRFFAGI  411 (446)
T ss_dssp             TCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             cccCHHHhCCCCCCCHHHHHhCccccCC
Confidence            999999999     99999999999865

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=4e-49  Score=403.14  Aligned_cols=267  Identities=26%  Similarity=0.452  Sum_probs=219.7

Q ss_pred             CCceeecCceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch--------------hhHHHHHHHHHHHHHH
Q 013973           85 GHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--------------KYREAAMIEIEVLQQL  150 (433)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--------------~~~~~~~~E~~~l~~l  150 (433)
                      +.+.......+.++|+++++||+|+||+||+|.++.+++.||+|++....              ...+.+..|+.+++.+
T Consensus        24 ~~~~~~~~~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  103 (504)
T 3q5i_A           24 GMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL  103 (504)
T ss_dssp             GGGCCEECSCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTC
T ss_pred             hheeeccCCCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhC
Confidence            33444455567789999999999999999999999999999999997432              2345677899999888


Q ss_pred             HhcCCCCCceEEecceeecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCc
Q 013973          151 AKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPEN  229 (433)
Q Consensus       151 ~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~N  229 (433)
                           .||||+++++++.+...+|+||||+ |++|.+++....  .+++..+..++.||+.||.|||++|||||||||+|
T Consensus       104 -----~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~N  176 (504)
T 3q5i_A          104 -----DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHKHNIVHRDIKPEN  176 (504)
T ss_dssp             -----CCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             -----CCCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHH
Confidence                 6799999999999999999999999 889999998764  79999999999999999999999999999999999


Q ss_pred             eEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhH
Q 013973          230 VLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIW  307 (433)
Q Consensus       230 ILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dvw  307 (433)
                      ||++.++                        ....+||+|||++.......  ...+||+.|+|||++.+ .|+.++|||
T Consensus       177 il~~~~~------------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Diw  231 (504)
T 3q5i_A          177 ILLENKN------------------------SLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVW  231 (504)
T ss_dssp             EEESSTT------------------------CCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTT-CBCTHHHHH
T ss_pred             EEEecCC------------------------CCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhcc-CCCchHHHH
Confidence            9996432                        22468899999887554432  34579999999999874 699999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHH
Q 013973          308 SVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL  387 (433)
Q Consensus       308 SlGv~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  387 (433)
                      ||||++|+|++|..||.+.+..+.+..+.......+.                                           
T Consensus       232 slG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~-------------------------------------------  268 (504)
T 3q5i_A          232 SCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDF-------------------------------------------  268 (504)
T ss_dssp             HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCH-------------------------------------------
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc-------------------------------------------
Confidence            9999999999999999988877766554432211111                                           


Q ss_pred             HhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       388 ~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                        ..+..++.++.+||.+||+.||.+|||+.|+|+||||++
T Consensus       269 --~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~  307 (504)
T 3q5i_A          269 --NDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKK  307 (504)
T ss_dssp             --HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred             --cccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhh
Confidence              112356789999999999999999999999999999964

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=1.5e-49  Score=383.85  Aligned_cols=264  Identities=28%  Similarity=0.529  Sum_probs=192.1

Q ss_pred             cCcEEEE---eeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           96 TSRYKIH---SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        96 ~~~~~~~---~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      .++|++.   +.||+|+||.||+|.++.+++.||||++...  .......|+.+++.+.    +|+||+++++++.+...
T Consensus         7 ~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~----~h~niv~~~~~~~~~~~   80 (325)
T 3kn6_A            7 YQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCE----GHPNIVKLHEVFHDQLH   80 (325)
T ss_dssp             HHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTT----TCTTBCCEEEEEECSSE
T ss_pred             hhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhc----CCCCeeEEEEEEEcCCE
Confidence            3568876   7899999999999999999999999999743  3456678899988873    47899999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      .|+||||+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.++               
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~---------------  143 (325)
T 3kn6_A           81 TFLVMELLNGGELFERIKKKK--HFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDEN---------------  143 (325)
T ss_dssp             EEEEECCCCSCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC-----------------
T ss_pred             EEEEEEccCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCC---------------
Confidence            99999999 889999998764  799999999999999999999999999999999999996532               


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                               ....+||+|||++.......   ...+||+.|+|||++.+..|+.++|||||||++|+|++|..||...+.
T Consensus       144 ---------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~  214 (325)
T 3kn6_A          144 ---------DNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDR  214 (325)
T ss_dssp             -----------CEEEECCCTTCEECCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC----
T ss_pred             ---------CcccEEEeccccceecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcc
Confidence                     22367888888876543322   335789999999999999999999999999999999999999986443


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      ....        ....+..        ..+..+.+.++.                      ..+..++.++.+||.+||+
T Consensus       215 ~~~~--------~~~~~~~--------~~i~~~~~~~~~----------------------~~~~~~s~~~~~li~~~L~  256 (325)
T 3kn6_A          215 SLTC--------TSAVEIM--------KKIKKGDFSFEG----------------------EAWKNVSQEAKDLIQGLLT  256 (325)
T ss_dssp             ---C--------CCHHHHH--------HHHTTTCCCCCS----------------------HHHHTSCHHHHHHHHHHHC
T ss_pred             cccc--------ccHHHHH--------HHHHcCCCCCCc----------------------ccccCCCHHHHHHHHHHCC
Confidence            1100        0000000        111222222111                      1123567889999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCC
Q 013973          409 YDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       409 ~dP~~R~ta~ell~hp~f~~~  429 (433)
                      .||.+|||+.|+++||||++.
T Consensus       257 ~dP~~Rpt~~ell~h~w~~~~  277 (325)
T 3kn6_A          257 VDPNKRLKMSGLRYNEWLQDG  277 (325)
T ss_dssp             CCTTTCCCTTTSTTCGGGCTT
T ss_pred             CChhHCCCHHHHhcChhhccC
Confidence            999999999999999999865

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=6.4e-49  Score=371.41  Aligned_cols=261  Identities=25%  Similarity=0.417  Sum_probs=217.8

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      .+.++|++.+.||+|+||.||+|.++.+++.||+|++....   .....+..|+.+++.+     .|+||+++++++...
T Consensus         3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~   77 (284)
T 3kk8_A            3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-----QHPNIVRLHDSIQEE   77 (284)
T ss_dssp             TTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEECS
T ss_pred             hhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHc-----CCCCcCeEEEEEEcC
Confidence            34678999999999999999999999999999999986432   3345667899999888     678999999999999


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      +..++||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++             
T Consensus        78 ~~~~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~-------------  142 (284)
T 3kk8_A           78 SFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA-------------  142 (284)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSS-------------
T ss_pred             CEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCC-------------
Confidence            9999999999 889999988764  799999999999999999999999999999999999996432             


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                                 ....+||+|||.+.......  ....||+.|+|||++.+..++.++||||||+++|+|++|..||.+.+
T Consensus       143 -----------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~  211 (284)
T 3kk8_A          143 -----------KGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED  211 (284)
T ss_dssp             -----------TTCCEEECCCTTCEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             -----------CCCcEEEeeceeeEEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCc
Confidence                       23458888888886544333  23579999999999999999999999999999999999999998877


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ..+....+.......+                       .                      ..+..+++++.+||.+||
T Consensus       212 ~~~~~~~~~~~~~~~~-----------------------~----------------------~~~~~~~~~~~~li~~~l  246 (284)
T 3kk8_A          212 QHRLYAQIKAGAYDYP-----------------------S----------------------PEWDTVTPEAKSLIDSML  246 (284)
T ss_dssp             HHHHHHHHHHTCCCCC-----------------------T----------------------TTTTTSCHHHHHHHHHHS
T ss_pred             hhHHHHHHHhccccCC-----------------------c----------------------hhhcccCHHHHHHHHHHc
Confidence            6665554433221111                       1                      012356778999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCC
Q 013973          408 RYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       408 ~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      +.||++|||+.|+|+||||++..
T Consensus       247 ~~dp~~Rps~~~~l~h~~~~~~~  269 (284)
T 3kk8_A          247 TVNPKKRITADQALKVPWICNRE  269 (284)
T ss_dssp             CSSTTTSCCHHHHTTSHHHHSCC
T ss_pred             ccChhhCCCHHHHhcCccccCCh
Confidence            99999999999999999998754

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=1.5e-49  Score=383.98  Aligned_cols=272  Identities=24%  Similarity=0.374  Sum_probs=221.5

Q ss_pred             ceeecCceecCcEEEE-eeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEE
Q 013973           87 YMFALGENLTSRYKIH-SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQ  162 (433)
Q Consensus        87 ~~~~~~~~~~~~~~~~-~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~  162 (433)
                      ..+...+.+.++|.+. +.||+|+||.||+|.++.+++.||+|+++...   .....+..|+.+++.+.    +|++|++
T Consensus        18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~----~~~~iv~   93 (327)
T 3lm5_A           18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAK----SCPRVIN   93 (327)
T ss_dssp             CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTT----TCTTBCC
T ss_pred             hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhcc----CCCCEEE
Confidence            4455566778889998 89999999999999999999999999987432   23456778898888874    4578999


Q ss_pred             ecceeecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccC
Q 013973          163 IRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVP  241 (433)
Q Consensus       163 ~~~~~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~  241 (433)
                      +++++...+.+++||||+ +++|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++..      
T Consensus        94 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~------  167 (327)
T 3lm5_A           94 LHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSI------  167 (327)
T ss_dssp             EEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCB------
T ss_pred             EEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecC------
Confidence            999999999999999999 8899999876555679999999999999999999999999999999999999541      


Q ss_pred             CCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhC
Q 013973          242 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG  319 (433)
Q Consensus       242 dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg  319 (433)
                                        ..++.+||+|||++.......  ...+||+.|+|||++.+..++.++|||||||++|+|++|
T Consensus       168 ------------------~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g  229 (327)
T 3lm5_A          168 ------------------YPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTH  229 (327)
T ss_dssp             ------------------TTBCCEEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             ------------------CCCCcEEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhC
Confidence                              124578888888887544332  335799999999999999999999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHH
Q 013973          320 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL  399 (433)
Q Consensus       320 ~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (433)
                      ..||.+.+..+....+.......+.                                             ..+..++..+
T Consensus       230 ~~pf~~~~~~~~~~~i~~~~~~~~~---------------------------------------------~~~~~~~~~~  264 (327)
T 3lm5_A          230 TSPFVGEDNQETYLNISQVNVDYSE---------------------------------------------ETFSSVSQLA  264 (327)
T ss_dssp             SCSSCCSSHHHHHHHHHHTCCCCCT---------------------------------------------TTTTTSCHHH
T ss_pred             CCCCCCCCchHHHHHHHhcccccCc---------------------------------------------hhhcccCHHH
Confidence            9999988777665554433222111                                             1123567789


Q ss_pred             HHHHHhccccCCCCCCCHHHHhcCCCCCCCCC
Q 013973          400 THLLQGLLRYDPTDRLTAREALRHPFFTRDHL  431 (433)
Q Consensus       400 ~~li~~~L~~dP~~R~ta~ell~hp~f~~~~~  431 (433)
                      .+||.+||+.||.+|||++|+|+||||++...
T Consensus       265 ~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~  296 (327)
T 3lm5_A          265 TDFIQSLLVKNPEKRPTAEICLSHSWLQQWDF  296 (327)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCT
T ss_pred             HHHHHHHcCCChhhCcCHHHHhCCHhhccccc
Confidence            99999999999999999999999999987543

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=4.6e-49  Score=414.72  Aligned_cols=252  Identities=24%  Similarity=0.358  Sum_probs=210.0

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .++|++++.||+|+||.||+|+++.+++.||||++++..    ...+....|..++..+    .+|++|+.+++++++.+
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~----~~~~~i~~l~~~~~~~~  415 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALP----GKPPFLTQLHSCFQTMD  415 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCT----TCCTTBCCEEEECBCSS
T ss_pred             ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhc----cCCCeEEEEEEEEEeCC
Confidence            468999999999999999999999999999999997432    2234455666666544    36788999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+||||||+ ||+|.+++...+  .+++..++.|+.||+.||+|||++|||||||||+||||+.+               
T Consensus       416 ~~~lV~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~---------------  478 (674)
T 3pfq_A          416 RLYFVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSE---------------  478 (674)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSS---------------
T ss_pred             EEEEEEeCcCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCC---------------
Confidence            999999999 899999998765  79999999999999999999999999999999999999544               


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCC---CCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERP---DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                                  +.+||+|||++.....   .....+||+.|+|||++.+..|+.++|||||||++|||++|..||.+.+
T Consensus       479 ------------g~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~  546 (674)
T 3pfq_A          479 ------------GHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED  546 (674)
T ss_dssp             ------------SCEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ------------CcEEEeecceeeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC
Confidence                        4566666666653221   2234689999999999999999999999999999999999999999887


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ..+.+..+..                       +.+.+                          +..++.++.+||.+||
T Consensus       547 ~~~~~~~i~~-----------------------~~~~~--------------------------p~~~s~~~~~li~~lL  577 (674)
T 3pfq_A          547 EDELFQSIME-----------------------HNVAY--------------------------PKSMSKEAVAICKGLM  577 (674)
T ss_dssp             HHHHHHHHHS-----------------------SCCCC--------------------------CTTSCHHHHHHHHHHS
T ss_pred             HHHHHHHHHh-----------------------CCCCC--------------------------CccCCHHHHHHHHHHc
Confidence            7666554432                       11112                          2356789999999999


Q ss_pred             ccCCCCCCCH-----HHHhcCCCCCCC
Q 013973          408 RYDPTDRLTA-----REALRHPFFTRD  429 (433)
Q Consensus       408 ~~dP~~R~ta-----~ell~hp~f~~~  429 (433)
                      ++||++||++     +||++||||+..
T Consensus       578 ~~dP~~R~~~~~~~~~ei~~h~ff~~i  604 (674)
T 3pfq_A          578 TKHPGKRLGCGPEGERDIKEHAFFRYI  604 (674)
T ss_dssp             CSSSTTCTTCSTTHHHHHHSSGGGSSC
T ss_pred             cCCHHHCCCCCCCcHHHHhcCccccCC
Confidence            9999999997     999999999864

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.9e-49  Score=378.11  Aligned_cols=251  Identities=24%  Similarity=0.429  Sum_probs=199.3

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh---------------------------hHHHHHHHHHHHH
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK---------------------------YREAAMIEIEVLQ  148 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---------------------------~~~~~~~E~~~l~  148 (433)
                      .++|++.+.||+|+||.||+|++..+++.||||++.....                           ..+.+..|+.+++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999864321                           1234677999988


Q ss_pred             HHHhcCCCCCceEEecceeec--CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 013973          149 QLAKHDKGGNRCVQIRNWFDY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDL  225 (433)
Q Consensus       149 ~l~~~~~~~~~i~~~~~~~~~--~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDl  225 (433)
                      .+     .|+||+++++++.+  .+.+|+||||+ +++|.+++..   ..+++..+..++.||+.||+|||++||+||||
T Consensus        92 ~l-----~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dl  163 (298)
T 2zv2_A           92 KL-----DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDI  163 (298)
T ss_dssp             TC-----CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             hC-----CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence            88     67899999999886  67899999999 7888776532   36999999999999999999999999999999


Q ss_pred             CCCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCC---
Q 013973          226 KPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLG---  299 (433)
Q Consensus       226 Kp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~---  299 (433)
                      ||+|||++.                           ++.+||+|||++.......   ....||+.|+|||++.+..   
T Consensus       164 kp~Nil~~~---------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  216 (298)
T 2zv2_A          164 KPSNLLVGE---------------------------DGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIF  216 (298)
T ss_dssp             CGGGEEECT---------------------------TSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCE
T ss_pred             CHHHEEECC---------------------------CCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCC
Confidence            999999954                           4456677777665443222   2347999999999998765   


Q ss_pred             CCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhc
Q 013973          300 WTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVM  379 (433)
Q Consensus       300 ~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (433)
                      ++.++|||||||++|+|++|..||...+.......+..                       +...++.            
T Consensus       217 ~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~-----------------------~~~~~~~------------  261 (298)
T 2zv2_A          217 SGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKS-----------------------QALEFPD------------  261 (298)
T ss_dssp             ESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-----------------------CCCCCCS------------
T ss_pred             CCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhc-----------------------ccCCCCC------------
Confidence            37889999999999999999999987665443332221                       1111111            


Q ss_pred             cchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          380 KLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                                  ...++.++.+||.+||+.||++|||+.|+|+||||++
T Consensus       262 ------------~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~~  298 (298)
T 2zv2_A          262 ------------QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR  298 (298)
T ss_dssp             ------------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHHC
T ss_pred             ------------ccccCHHHHHHHHHHhhcChhhCCCHHHHhcCccccC
Confidence                        1356778999999999999999999999999999964

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=2.5e-49  Score=389.33  Aligned_cols=257  Identities=30%  Similarity=0.456  Sum_probs=208.2

Q ss_pred             CcEEE--EeeeeccccEEEEEEEECCCCeEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           97 SRYKI--HSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        97 ~~~~~--~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      +.|.+  .+.||+|+||.||+|.+..+++.||+|+++... ...+.+..|+.+++++     .|+||+++++++...+.+
T Consensus        87 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~~~~~~~~~~~~  161 (373)
T 2x4f_A           87 SFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL-----DHANLIQLYDAFESKNDI  161 (373)
T ss_dssp             GTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEEECSSEE
T ss_pred             cceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhC-----CCCCCCeEEEEEEECCEE
Confidence            44555  678999999999999999999999999997533 3456678899998887     679999999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      +|||||+ +++|.+++.... ..+++..+..++.||+.||+|||+.||+||||||+|||+..                  
T Consensus       162 ~lv~E~~~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~------------------  222 (373)
T 2x4f_A          162 VLVMEYVDGGELFDRIIDES-YNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN------------------  222 (373)
T ss_dssp             EEEEECCTTCEEHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEE------------------
T ss_pred             EEEEeCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEec------------------
Confidence            9999999 889999987643 36999999999999999999999999999999999999953                  


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                             +.++.+||+|||++.......  ...+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+
T Consensus       223 -------~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~  295 (373)
T 2x4f_A          223 -------RDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE  295 (373)
T ss_dssp             -------TTTTEEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred             -------CCCCcEEEEeCCCceecCCccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                   234567888888776544332  23479999999999999899999999999999999999999999888776


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      .+..+.......+.                                             ..+..++.++.+||.+||+.|
T Consensus       296 ~~~~i~~~~~~~~~---------------------------------------------~~~~~~~~~~~~li~~~L~~d  330 (373)
T 2x4f_A          296 TLNNILACRWDLED---------------------------------------------EEFQDISEEAKEFISKLLIKE  330 (373)
T ss_dssp             HHHHHHHTCCCSCS---------------------------------------------GGGTTSCHHHHHHHHTTSCSS
T ss_pred             HHHHHHhccCCCCh---------------------------------------------hhhccCCHHHHHHHHHHcCCC
Confidence            66554332111110                                             112356778999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCC
Q 013973          411 PTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       411 P~~R~ta~ell~hp~f~~~  429 (433)
                      |.+|||+.|+|+||||++.
T Consensus       331 p~~Rps~~e~l~hp~~~~~  349 (373)
T 2x4f_A          331 KSWRISASEALKHPWLSDH  349 (373)
T ss_dssp             GGGSCCHHHHHHSHHHHCH
T ss_pred             hhhCCCHHHHhcCcCcCCC
Confidence            9999999999999999754

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=6.7e-49  Score=402.81  Aligned_cols=254  Identities=26%  Similarity=0.412  Sum_probs=210.0

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      ..++|++.+.||+|+||.||+|.++.+|+.||+|++.+..    .....+..|+.+++.+     +|++|+++++.+.+.
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l-----~hp~Iv~l~~~~~~~  256 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-----NSRFVVSLAYAYETK  256 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-----CCTTBCCEEEEEECS
T ss_pred             cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHc-----CCCCEeeEEEEEeeC
Confidence            3467999999999999999999999999999999996432    2234567899999888     678999999999999


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      +.+|+||||+ ||+|.+++...+...+++..++.|+.||+.||+|||++|||||||||+|||++.+              
T Consensus       257 ~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~--------------  322 (576)
T 2acx_A          257 DALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDH--------------  322 (576)
T ss_dssp             SEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT--------------
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCC--------------
Confidence            9999999999 9999999987765569999999999999999999999999999999999999544              


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                                   +.+||+|||++.......  ...+||+.|+|||++.+..|+.++|||||||++|||++|..||.+..
T Consensus       323 -------------g~vKL~DFGla~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~  389 (576)
T 2acx_A          323 -------------GHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK  389 (576)
T ss_dssp             -------------SCEEECCCTTCEECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSS
T ss_pred             -------------CCeEEEecccceecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccc
Confidence                         456666666665443322  23489999999999999999999999999999999999999998653


Q ss_pred             h----HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          328 N----LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       328 ~----~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      .    .+....+.                       ....                          .++..++.++.+||
T Consensus       390 ~~~~~~~i~~~i~-----------------------~~~~--------------------------~~p~~~s~~~~dLI  420 (576)
T 2acx_A          390 KKIKREEVERLVK-----------------------EVPE--------------------------EYSERFSPQARSLC  420 (576)
T ss_dssp             SCCCHHHHHHHHH-----------------------HCCC--------------------------CCCTTSCHHHHHHH
T ss_pred             cchhHHHHHHHhh-----------------------cccc--------------------------cCCccCCHHHHHHH
Confidence            2    11111111                       0001                          12235678999999


Q ss_pred             HhccccCCCCCC-----CHHHHhcCCCCCCC
Q 013973          404 QGLLRYDPTDRL-----TAREALRHPFFTRD  429 (433)
Q Consensus       404 ~~~L~~dP~~R~-----ta~ell~hp~f~~~  429 (433)
                      .+||+.||.+||     +++|+++||||+..
T Consensus       421 ~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i  451 (576)
T 2acx_A          421 SQLLCKDPAERLGCRGGSAREVKEHPLFKKL  451 (576)
T ss_dssp             HHHTCSSGGGSTTCSSSHHHHHHTSGGGTTC
T ss_pred             HHhccCCHHHcCCCCCCCHHHHHhChhhccC
Confidence            999999999999     79999999999864

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=4.6e-49  Score=384.24  Aligned_cols=286  Identities=27%  Similarity=0.460  Sum_probs=220.8

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec---
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY---  169 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~---  169 (433)
                      .++|++++.||+|+||.||+|+++.+++.||+|++....   .....+..|+.+++.+     .|+||+++++++..   
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~   90 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL-----KHENVVNLIEICRTKAS   90 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHC-----CCTTBCCEEEEEEEC--
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhc-----cCCCcccHhheeecccc
Confidence            367999999999999999999999999999999985322   2234567899999988     67899999998876   


Q ss_pred             -----CCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCc
Q 013973          170 -----RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  244 (433)
Q Consensus       170 -----~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg  244 (433)
                           .+.+|+||||++++|.+.+.... ..+++..+..++.||+.||+|||++|||||||||+|||++.++        
T Consensus        91 ~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~--------  161 (351)
T 3mi9_A           91 PYNRCKGSIYLVFDFCEHDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG--------  161 (351)
T ss_dssp             ------CEEEEEEECCSEEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS--------
T ss_pred             ccccCCceEEEEEeccCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCC--------
Confidence                 45799999999889998887653 4699999999999999999999999999999999999995544        


Q ss_pred             CCCCCCCCCcccccCCCCCCEEEEecCCccccCC-------CCCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHH
Q 013973          245 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP-------DQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVEL  316 (433)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-------~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~el  316 (433)
                                         .+||+|||++.....       .....+||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus       162 -------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el  222 (351)
T 3mi9_A          162 -------------------VLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM  222 (351)
T ss_dssp             -------------------CEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHH
T ss_pred             -------------------CEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHH
Confidence                               566666665543221       1123478999999999986 4589999999999999999


Q ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCch
Q 013973          317 CTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA  396 (433)
Q Consensus       317 ltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (433)
                      ++|..||.+.+..+....+....+..+...+.........  ..  +.......           .........  ...+
T Consensus       223 l~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~-----------~~~~~~~~~--~~~~  285 (351)
T 3mi9_A          223 WTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELY--EK--LELVKGQK-----------RKVKDRLKA--YVRD  285 (351)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGG--TS--SCCCSSCC-----------CCHHHHHHH--HHCC
T ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhh--cc--cccccccc-----------cCHHHHhhh--ccCC
Confidence            9999999999999999999999988877654433221100  00  00000000           000000000  0135


Q ss_pred             hHHHHHHHhccccCCCCCCCHHHHhcCCCCCCCCC
Q 013973          397 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL  431 (433)
Q Consensus       397 ~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~~~  431 (433)
                      +++.+||.+||+.||++|||++|+|+||||++...
T Consensus       286 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  320 (351)
T 3mi9_A          286 PYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPM  320 (351)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSSC
T ss_pred             hHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCCC
Confidence            67899999999999999999999999999987653

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=3e-49  Score=399.49  Aligned_cols=253  Identities=27%  Similarity=0.399  Sum_probs=211.4

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      ...++|.+.+.||+|+||.||+|.+..+|+.||||++....    .....+.+|+.+++.+     .|+||+++++++..
T Consensus        13 ~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l-----~HpnIv~l~~~~~~   87 (476)
T 2y94_A           13 VKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF-----RHPHIIKLYQVIST   87 (476)
T ss_dssp             CEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTC-----CCTTBCCEEEEEEC
T ss_pred             ceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhC-----CCCCCCcEEEEEEE
Confidence            34578999999999999999999999999999999997432    2235677888888777     67999999999999


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      .+.+|+||||+ |++|.+++...+  .+++..++.++.||+.||+|||++|||||||||+|||++               
T Consensus        88 ~~~~~lv~E~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~---------------  150 (476)
T 2y94_A           88 PSDIFMVMEYVSGGELFDYICKNG--RLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLD---------------  150 (476)
T ss_dssp             SSEEEEEEECCSSEEHHHHTTSSS--SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEC---------------
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEe---------------
Confidence            99999999999 899999997654  799999999999999999999999999999999999994               


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCC-CCcchhHHHHHHHHHHHhCCCCCCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQT  325 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~Pf~~  325 (433)
                                  .++.+||+|||++.......  ...+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+
T Consensus       151 ------------~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~  218 (476)
T 2y94_A          151 ------------AHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD  218 (476)
T ss_dssp             ------------TTCCEEECCCSSCEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ------------cCCCeEEEeccchhhccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCC
Confidence                        44567777777766543322  34589999999999998776 6899999999999999999999988


Q ss_pred             CChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHh
Q 013973          326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  405 (433)
Q Consensus       326 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  405 (433)
                      .+..+....+..                       +.+..                          +..+++++.+||.+
T Consensus       219 ~~~~~~~~~i~~-----------------------~~~~~--------------------------p~~~s~~~~~Li~~  249 (476)
T 2y94_A          219 DHVPTLFKKICD-----------------------GIFYT--------------------------PQYLNPSVISLLKH  249 (476)
T ss_dssp             SSSHHHHHHHHT-----------------------TCCCC--------------------------CTTCCHHHHHHHHH
T ss_pred             CCHHHHHHHHhc-----------------------CCcCC--------------------------CccCCHHHHHHHHH
Confidence            766554443321                       11111                          22456789999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCC
Q 013973          406 LLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       406 ~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      ||+.||.+|||+.|+++||||++.
T Consensus       250 ~L~~dP~~Rpt~~eil~hp~~~~~  273 (476)
T 2y94_A          250 MLQVDPMKRATIKDIREHEWFKQD  273 (476)
T ss_dssp             HTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred             HcCCCchhCcCHHHHHhCHHhhhc
Confidence            999999999999999999999764

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.2e-49  Score=384.76  Aligned_cols=280  Identities=27%  Similarity=0.474  Sum_probs=215.6

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh------hHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK------YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      .++|++++.||+|+||.||+|.+..+++.||||+++....      ....+..|+.+++.+     .|+||+++++++..
T Consensus         9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~   83 (346)
T 1ua2_A            9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-----SHPNIIGLLDAFGH   83 (346)
T ss_dssp             ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHC-----CCTTBCCEEEEECC
T ss_pred             hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhC-----CCCCCCeEEEEEee
Confidence            4679999999999999999999999999999999863221      123566899999888     67899999999999


Q ss_pred             CCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          170 RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       170 ~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      .+.+++||||+.++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.               
T Consensus        84 ~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~---------------  147 (346)
T 1ua2_A           84 KSNISLVFDFMETDLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDE---------------  147 (346)
T ss_dssp             TTCCEEEEECCSEEHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT---------------
T ss_pred             CCceEEEEEcCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcC---------------
Confidence            99999999999779999987643 46899999999999999999999999999999999999954               


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQT  325 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~~  325 (433)
                                  ++.+||+|||++......   ....+||+.|+|||++.+. .++.++|||||||++|+|++|.+||.+
T Consensus       148 ------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~  215 (346)
T 1ua2_A          148 ------------NGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPG  215 (346)
T ss_dssp             ------------TCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ------------CCCEEEEecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence                        445666666666543222   1235789999999999764 589999999999999999999999999


Q ss_pred             CChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHh
Q 013973          326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  405 (433)
Q Consensus       326 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  405 (433)
                      .+..+.+..+....+..+...+......... +....  .+.                  ..........+.++.+||.+
T Consensus       216 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~------------------~~~~~~~~~~~~~~~~li~~  274 (346)
T 1ua2_A          216 DSDLDQLTRIFETLGTPTEEQWPDMCSLPDY-VTFKS--FPG------------------IPLHHIFSAAGDDLLDLIQG  274 (346)
T ss_dssp             SSHHHHHHHHHHHHCCCCTTTSSSTTSSTTC-CCCCC--CCC------------------CCHHHHCTTCCHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHcCCCChhhhhhhccCccc-ccccc--cCC------------------CChHHhhccCCHHHHHHHHH
Confidence            9988888888877776654322211110000 00000  000                  00111234667899999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCC
Q 013973          406 LLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       406 ~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      ||+.||++|||+.|+|+||||++.
T Consensus       275 ~L~~dP~~Rpt~~ell~h~~f~~~  298 (346)
T 1ua2_A          275 LFLFNPCARITATQALKMKYFSNR  298 (346)
T ss_dssp             HHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred             HhccChhhCCCHHHHhcChhhhcC
Confidence            999999999999999999999864

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=9.6e-50  Score=396.74  Aligned_cols=298  Identities=26%  Similarity=0.482  Sum_probs=211.8

Q ss_pred             eecCcEEEE-eeeeccccEEEEEEEEC--CCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEeccee--e
Q 013973           94 NLTSRYKIH-SKMGEGTFGQVLECWDR--ERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF--D  168 (433)
Q Consensus        94 ~~~~~~~~~-~~iG~G~~g~V~~~~~~--~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~--~  168 (433)
                      .+.+.|++. ++||+|+||+||+|.++  .+++.||||++.... ....+.+|+.+++.+     .|+||+++++++  .
T Consensus        17 ~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~~   90 (405)
T 3rgf_A           17 RVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG-ISMSACREIALLREL-----KHPNVISLQKVFLSH   90 (405)
T ss_dssp             CHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS-CCHHHHHHHHHHHHC-----CCTTBCCCCEEEEET
T ss_pred             hhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC-CCHHHHHHHHHHHhc-----CCCCeeeEeeEEecC
Confidence            445678874 58999999999999966  568899999997432 334577899999998     678999999999  4


Q ss_pred             cCCeEEEEEecCCCCHHHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccC
Q 013973          169 YRNHICIVFEKLGSSLYDFLRKNN-------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVP  241 (433)
Q Consensus       169 ~~~~~~lV~e~~~~~L~~~l~~~~-------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~  241 (433)
                      ....+|+||||++++|.+++....       ...+++..++.++.||+.||.|||++|||||||||+|||+..++     
T Consensus        91 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~-----  165 (405)
T 3rgf_A           91 ADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG-----  165 (405)
T ss_dssp             TTTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSS-----
T ss_pred             CCCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCC-----
Confidence            578999999999889999886321       12499999999999999999999999999999999999995332     


Q ss_pred             CCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC------CCceeecCcccchhhhhCC-CCCCcchhHHHHHHHH
Q 013973          242 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD------QNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILV  314 (433)
Q Consensus       242 dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~  314 (433)
                                        +.++.+||+|||++......      ....+||+.|+|||++.+. .|+.++|||||||++|
T Consensus       166 ------------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~  227 (405)
T 3rgf_A          166 ------------------PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFA  227 (405)
T ss_dssp             ------------------TTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHH
T ss_pred             ------------------CCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHH
Confidence                              34567888888887654322      1335799999999999875 4899999999999999


Q ss_pred             HHHhCCCCCCCCCh---------HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHH
Q 013973          315 ELCTGEALFQTHEN---------LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ  385 (433)
Q Consensus       315 elltg~~Pf~~~~~---------~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (433)
                      ||++|.+||.+...         .+++..+...+|..+...+..+............+.           ..........
T Consensus       228 ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~  296 (405)
T 3rgf_A          228 ELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFR-----------RNTYTNCSLI  296 (405)
T ss_dssp             HHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCC-----------GGGGTTCCHH
T ss_pred             HHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhcc-----------ccCCCcchhh
Confidence            99999999976554         467778888888776554333321111100000000           0000001111


Q ss_pred             HHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCCCCC
Q 013973          386 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL  431 (433)
Q Consensus       386 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~~~  431 (433)
                      ..........+.++.+||.+||+.||.+|||++|+|+||||++..+
T Consensus       297 ~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~~  342 (405)
T 3rgf_A          297 KYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPL  342 (405)
T ss_dssp             HHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSSC
T ss_pred             hhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCCC
Confidence            1222223344778999999999999999999999999999987643

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=9e-49  Score=383.16  Aligned_cols=286  Identities=30%  Similarity=0.468  Sum_probs=214.9

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC----
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN----  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~----  171 (433)
                      .++|++.+.||+|+||.||+|.+..+++.||||++............|+..+..+     .|+||+++++++...+    
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l-----~h~niv~~~~~~~~~~~~~~   96 (360)
T 3e3p_A           22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVL-----HHPNIVQLQSYFYTLGERDR   96 (360)
T ss_dssp             HTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHH-----CCTTBCCEEEEEEEECSSCT
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhc-----CCCCcccHHHhhhccccccc
Confidence            4679999999999999999999999999999999875544444556667777777     6789999999986533    


Q ss_pred             ---eEEEEEecCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHH--HCCceeccCCCCceEeeccCccccCCCc
Q 013973          172 ---HICIVFEKLGSSLYDFLRK--NNYRSFPIDLVREIARQLLECIAFMH--DLCMIHTDLKPENVLLVSSEYIKVPDYK  244 (433)
Q Consensus       172 ---~~~lV~e~~~~~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH--~~~ivHrDlKp~NILl~~~~~~~i~dfg  244 (433)
                         .+++||||+.++|.+.+..  .....+++..+..++.||+.||.|||  ++|||||||||+|||++.          
T Consensus        97 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~----------  166 (360)
T 3e3p_A           97 RDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNE----------  166 (360)
T ss_dssp             TCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEET----------
T ss_pred             cceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeC----------
Confidence               3899999997787776653  23357899999999999999999999  999999999999999963          


Q ss_pred             CCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCC-CCCcchhHHHHHHHHHHHhCCC
Q 013973          245 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEA  321 (433)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~  321 (433)
                                      .++.+||+|||++.......  ....||+.|+|||++.+.. ++.++|||||||++|+|++|..
T Consensus       167 ----------------~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~  230 (360)
T 3e3p_A          167 ----------------ADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEP  230 (360)
T ss_dssp             ----------------TTTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             ----------------CCCcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence                            23456777777665443322  2347899999999997654 8999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       322 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      ||.+.+..+.+..+.+.++..+.+.+.........+....     .            ................+.++.+
T Consensus       231 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~------------~~~~~~~~~~~~~~~~~~~~~~  293 (360)
T 3e3p_A          231 IFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYN-----S------------KGIPWSNVFSDHSLKDAKEAYD  293 (360)
T ss_dssp             SSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGC-----C------------CCCCHHHHTTTCCCTTHHHHHH
T ss_pred             CcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccc-----c------------ccCCcccccchhhccccHHHHH
Confidence            9999999999999999999999888776543221111000     0            0001112222233456889999


Q ss_pred             HHHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          402 LLQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       402 li~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      ||.+||+.||.+|||+.|+|+||||++.
T Consensus       294 li~~~L~~dP~~Rpt~~e~l~hp~f~~~  321 (360)
T 3e3p_A          294 LLSALLQYLPEERMKPYEALCHPYFDEL  321 (360)
T ss_dssp             HHHHHTCSSGGGSCCHHHHTTSGGGGGG
T ss_pred             HHHHHhccCccccCCHHHHhcCcccccc
Confidence            9999999999999999999999999754

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=9.8e-49  Score=368.93  Aligned_cols=257  Identities=25%  Similarity=0.440  Sum_probs=215.2

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      +.++|++.+.||+|+||.||+|.+..++..||+|++... ....+.+..|+.+++.+     .|+||+++++++.+.+..
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~   81 (277)
T 3f3z_A            7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL-----DHPNIIRLYETFEDNTDI   81 (277)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTC-----CCTTBCCEEEEEECSSEE
T ss_pred             hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhC-----CCCCEeeEEEEEecCCeE
Confidence            457899999999999999999999999999999998643 23456678899999888     678999999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      ++||||+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||+..+                 
T Consensus        82 ~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~-----------------  142 (277)
T 3f3z_A           82 YLVMELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTD-----------------  142 (277)
T ss_dssp             EEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSS-----------------
T ss_pred             EEEEeccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecC-----------------
Confidence            9999999 889999998764  79999999999999999999999999999999999999321                 


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                             +.++.+||+|||.+.......  ....||+.|+|||++.+. ++.++||||||+++|+|++|..||...+..+
T Consensus       143 -------~~~~~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~  214 (277)
T 3f3z_A          143 -------SPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSE  214 (277)
T ss_dssp             -------STTCCEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             -------CCCCcEEEEecccceeccCccchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHH
Confidence                   234568888888776544332  335799999999998764 8999999999999999999999999887766


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+.......|...                                             ...+++++.+||.+||+.|
T Consensus       215 ~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~li~~~l~~d  249 (277)
T 3f3z_A          215 VMLKIREGTFTFPEKD---------------------------------------------WLNVSPQAESLIRRLLTKS  249 (277)
T ss_dssp             HHHHHHHCCCCCCHHH---------------------------------------------HTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHHHhCCCCCCchh---------------------------------------------hhcCCHHHHHHHHHHccCC
Confidence            6555443332222211                                             1245778999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCC
Q 013973          411 PTDRLTAREALRHPFFTR  428 (433)
Q Consensus       411 P~~R~ta~ell~hp~f~~  428 (433)
                      |++|||+.|+|+||||++
T Consensus       250 p~~R~s~~~~l~h~~~~~  267 (277)
T 3f3z_A          250 PKQRITSLQALEHEWFEK  267 (277)
T ss_dssp             TTTSCCHHHHTTSHHHHH
T ss_pred             hhhCcCHHHHhcCHHHhc
Confidence            999999999999999964

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=1e-48  Score=387.82  Aligned_cols=282  Identities=30%  Similarity=0.518  Sum_probs=219.6

Q ss_pred             ceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC--
Q 013973           93 ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR--  170 (433)
Q Consensus        93 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~--  170 (433)
                      +....+|++++.||+|+||+||+|.+..+++ ||+|.+......   ..+|+.+++.+     .|+||+++++++...  
T Consensus        36 ~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~---~~~E~~il~~l-----~h~niv~l~~~~~~~~~  106 (394)
T 4e7w_A           36 EQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF---KNRELQIMRIV-----KHPNVVDLKAFFYSNGD  106 (394)
T ss_dssp             CEEEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS---CCHHHHHHHTC-----CCTTBCCEEEEEEEESS
T ss_pred             CcccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch---HHHHHHHHHhC-----CCCCcceEEEEEEecCC
Confidence            3455689999999999999999999988777 777776533221   23588888887     679999999998543  


Q ss_pred             ----CeEEEEEecCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCc
Q 013973          171 ----NHICIVFEKLGSSLYDFLRK--NNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  244 (433)
Q Consensus       171 ----~~~~lV~e~~~~~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg  244 (433)
                          ..+++||||+.+++.+.+..  .....+++..++.++.||+.||+|||++||+||||||+|||++.          
T Consensus       107 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~----------  176 (394)
T 4e7w_A          107 KKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDP----------  176 (394)
T ss_dssp             SSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET----------
T ss_pred             CCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcC----------
Confidence                34899999997777665542  22347999999999999999999999999999999999999961          


Q ss_pred             CCCCCCCCCcccccCCCCCCEEEEecCCccccCCC--CCceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCC
Q 013973          245 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEA  321 (433)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~  321 (433)
                                      .++.+||+|||++......  ....+||+.|+|||++.+. .|+.++|||||||++|||++|..
T Consensus       177 ----------------~~~~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~  240 (394)
T 4e7w_A          177 ----------------PSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQP  240 (394)
T ss_dssp             ----------------TTTEEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             ----------------CCCcEEEeeCCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence                            3445777777777543222  2345789999999999875 59999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       322 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      ||.+.+..+.+..+.+.+|..+.+.+..........      ..+...              .......+....++++.+
T Consensus       241 pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~------~~~~~~--------------~~~~~~~~~~~~~~~~~~  300 (394)
T 4e7w_A          241 LFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEH------KFPQIR--------------PHPFSKVFRPRTPPDAID  300 (394)
T ss_dssp             SSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSS------CCCCCC--------------CCCHHHHSCTTCCHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhh------cccccc--------------CCcHHHhccccCCHHHHH
Confidence            999999999999999999999887766543322111      011100              001111233457889999


Q ss_pred             HHHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          402 LLQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       402 li~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      ||.+||+.||.+|||+.|+|+||||++.
T Consensus       301 li~~~L~~dP~~R~t~~e~l~hp~f~~~  328 (394)
T 4e7w_A          301 LISRLLEYTPSARLTAIEALCHPFFDEL  328 (394)
T ss_dssp             HHHHHCCSSGGGSCCHHHHHTSGGGSTT
T ss_pred             HHHHHhCCChhhCCCHHHHhcChhhhhh
Confidence            9999999999999999999999999864

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=1.6e-48  Score=369.45  Aligned_cols=259  Identities=28%  Similarity=0.425  Sum_probs=208.2

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .+.++|++.+.||+|+||.||+|.++.+++.||+|++....  ...+.+..|+.+++.+     .|+||+++++++.+.+
T Consensus        19 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~   93 (285)
T 3is5_A           19 TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSL-----DHPNIIKIFEVFEDYH   93 (285)
T ss_dssp             CHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTC-----CCTTBCCEEEEEECSS
T ss_pred             ChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhC-----CCchHHhHHHheecCC
Confidence            34578999999999999999999999999999999987433  2346678899999888     6799999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      ..++||||+ +++|.+++...  ....+++..+..++.||+.||+|||++||+||||||+|||++.+             
T Consensus        94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~-------------  160 (285)
T 3is5_A           94 NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDT-------------  160 (285)
T ss_dssp             EEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSS-------------
T ss_pred             eEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecC-------------
Confidence            999999999 88999998643  12479999999999999999999999999999999999999532             


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                                 +.++.+||+|||++.......  ....||+.|+|||++. ..++.++||||||+++|+|++|..||.+.
T Consensus       161 -----------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~  228 (285)
T 3is5_A          161 -----------SPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGT  228 (285)
T ss_dssp             -----------STTCCEEECCCCCCCC----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             -----------CCCCCEEEEeeecceecCCcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCC
Confidence                       234568888888886543322  3457999999999986 46899999999999999999999999887


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      +..+....+......                       .+.                       .....++++.+||.+|
T Consensus       229 ~~~~~~~~~~~~~~~-----------------------~~~-----------------------~~~~~~~~~~~li~~~  262 (285)
T 3is5_A          229 SLEEVQQKATYKEPN-----------------------YAV-----------------------ECRPLTPQAVDLLKQM  262 (285)
T ss_dssp             SHHHHHHHHHHCCCC-----------------------CCC-------------------------CCCCHHHHHHHHHH
T ss_pred             CHHHHHhhhccCCcc-----------------------ccc-----------------------ccCcCCHHHHHHHHHH
Confidence            655443322111000                       000                       0123567899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      |+.||++|||+.|+|+||||++
T Consensus       263 L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          263 LTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             TCSCTTTSCCHHHHHTSGGGGC
T ss_pred             ccCChhhCcCHHHHhcCHHhhc
Confidence            9999999999999999999986

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=4.6e-49  Score=401.70  Aligned_cols=260  Identities=28%  Similarity=0.490  Sum_probs=213.8

Q ss_pred             CceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           92 GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        92 ~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      ...+.++|++++.||+|+||+||+|+++.++..||+|++....   .....+..|+.+++.+     .||||+++++++.
T Consensus        32 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~  106 (494)
T 3lij_A           32 KGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLL-----DHPNIMKLYDFFE  106 (494)
T ss_dssp             BCCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTC-----CCTTBCCEEEEEE
T ss_pred             CCchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhC-----CCCCCCeEEEEEE
Confidence            3455678999999999999999999999999999999997432   2345677899998887     6799999999999


Q ss_pred             cCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC
Q 013973          169 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       169 ~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                      +.+.+|+||||+ +++|.+++....  .+++..+..++.||+.||.|||++|||||||||+|||++..            
T Consensus       107 ~~~~~~lv~e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~------------  172 (494)
T 3lij_A          107 DKRNYYLVMECYKGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESK------------  172 (494)
T ss_dssp             CSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCS------------
T ss_pred             eCCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCC------------
Confidence            999999999999 899999988764  79999999999999999999999999999999999999542            


Q ss_pred             CCCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 013973          248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  325 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~  325 (433)
                                  +....+||+|||++.......  ...+||+.|+|||++. ..|+.++|||||||++|+|++|.+||.+
T Consensus       173 ------------~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~  239 (494)
T 3lij_A          173 ------------EKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGG  239 (494)
T ss_dssp             ------------STTCCEEECCCTTCEECBTTBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ------------CCCCcEEEEECCCCeECCCCccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCC
Confidence                        234568899999887554332  3457999999999986 4699999999999999999999999998


Q ss_pred             CChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHh
Q 013973          326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  405 (433)
Q Consensus       326 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  405 (433)
                      .+..+.+..+.......+                       .                      ..+..++.++.+||.+
T Consensus       240 ~~~~~~~~~i~~~~~~~~-----------------------~----------------------~~~~~~s~~~~~li~~  274 (494)
T 3lij_A          240 QTDQEILRKVEKGKYTFD-----------------------S----------------------PEWKNVSEGAKDLIKQ  274 (494)
T ss_dssp             SSHHHHHHHHHHTCCCCC-----------------------S----------------------GGGTTSCHHHHHHHHH
T ss_pred             CCHHHHHHHHHhCCCCCC-----------------------c----------------------hhcccCCHHHHHHHHH
Confidence            887766655433222111                       1                      1123567789999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCC
Q 013973          406 LLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       406 ~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      ||+.||.+|||+.|+|+||||++
T Consensus       275 ~L~~dp~~R~s~~e~l~hp~~~~  297 (494)
T 3lij_A          275 MLQFDSQRRISAQQALEHPWIKE  297 (494)
T ss_dssp             HTCSSTTTSCCHHHHHTCHHHHH
T ss_pred             HCCCChhhCccHHHHhcCccccc
Confidence            99999999999999999999964

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=1.8e-48  Score=398.50  Aligned_cols=253  Identities=22%  Similarity=0.366  Sum_probs=208.4

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .++|++.+.||+|+||.||+|+++.+|+.||+|++.+..    .....+..|+.+++.+     +|++|+++++++.+..
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l-----~hp~Iv~l~~~~~~~~  258 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-----HSRFIVSLAYAFETKT  258 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-----CCTTBCCEEEEEECSS
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhc-----CCCCEeeEEEEEeeCC
Confidence            478999999999999999999999999999999997432    2234567899999888     6799999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNN--YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      .+|+||||+ ||+|.+++....  ...+++..++.|+.||+.||+|||++|||||||||+|||++.              
T Consensus       259 ~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~--------------  324 (543)
T 3c4z_A          259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDD--------------  324 (543)
T ss_dssp             EEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT--------------
T ss_pred             EEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeC--------------
Confidence            999999999 899999998653  346999999999999999999999999999999999999954              


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  325 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~  325 (433)
                                   ++.+||+|||++.......   ...+||+.|+|||++.+..|+.++|||||||++|||++|..||.+
T Consensus       325 -------------~g~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~  391 (543)
T 3c4z_A          325 -------------DGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA  391 (543)
T ss_dssp             -------------TSCEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             -------------CCCEEEeecceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCC
Confidence                         4456666666665433222   234899999999999999999999999999999999999999986


Q ss_pred             CCh----HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          326 HEN----LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       326 ~~~----~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      .+.    .+....+..                       +..                          .++..++.++.+
T Consensus       392 ~~~~~~~~~~~~~i~~-----------------------~~~--------------------------~~p~~~s~~~~~  422 (543)
T 3c4z_A          392 RGEKVENKELKQRVLE-----------------------QAV--------------------------TYPDKFSPASKD  422 (543)
T ss_dssp             TTCCCCHHHHHHHHHH-----------------------CCC--------------------------CCCTTSCHHHHH
T ss_pred             CccchhHHHHHHHHhh-----------------------ccc--------------------------CCCcccCHHHHH
Confidence            532    222211111                       111                          123456789999


Q ss_pred             HHHhccccCCCCCCC-----HHHHhcCCCCCCC
Q 013973          402 LLQGLLRYDPTDRLT-----AREALRHPFFTRD  429 (433)
Q Consensus       402 li~~~L~~dP~~R~t-----a~ell~hp~f~~~  429 (433)
                      ||.+||++||++||+     ++++++||||+..
T Consensus       423 li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i  455 (543)
T 3c4z_A          423 FCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI  455 (543)
T ss_dssp             HHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred             HHHHhccCCHhHCCCCcccCHHHHHcCccccCC
Confidence            999999999999995     5899999999864

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=2.2e-48  Score=379.82  Aligned_cols=282  Identities=28%  Similarity=0.484  Sum_probs=222.2

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      .+.++|.+.+.||+|+||.||+|.++.+|+.||||++...   ......+..|+.+++.+     .|+||+++++++...
T Consensus        21 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~   95 (353)
T 3coi_A           21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-----QHENVIGLLDVFTPA   95 (353)
T ss_dssp             EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHC-----CCTTBCCCSEEECSC
T ss_pred             ccCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhc-----CCCCcccHhheEecc
Confidence            3467899999999999999999999999999999998642   23345677899999888     678999999998876


Q ss_pred             Ce------EEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCc
Q 013973          171 NH------ICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  244 (433)
Q Consensus       171 ~~------~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg  244 (433)
                      ..      +|+||||++++|.+++..    .+++..+..++.||+.||+|||++||+||||||+|||++           
T Consensus        96 ~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~-----------  160 (353)
T 3coi_A           96 SSLRNFYDFYLVMPFMQTDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN-----------  160 (353)
T ss_dssp             SSGGGCCCCEEEEECCSEEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC-----------
T ss_pred             cccccceeEEEEeccccCCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeEC-----------
Confidence            53      599999998888877642    599999999999999999999999999999999999995           


Q ss_pred             CCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCC
Q 013973          245 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALF  323 (433)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf  323 (433)
                                      .++.+||+|||++..........+||+.|+|||++.+ ..++.++|||||||++|+|++|..||
T Consensus       161 ----------------~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf  224 (353)
T 3coi_A          161 ----------------EDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLF  224 (353)
T ss_dssp             ----------------TTCCEEECSTTCTTC--------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSS
T ss_pred             ----------------CCCcEEEeecccccCCCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence                            4456777777776655444445678999999999987 67899999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      .+.+..+.+..+....|..+.++...+...............+.                  ..........+.++.+||
T Consensus       225 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~li  286 (353)
T 3coi_A          225 KGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPR------------------KDFTQLFPRASPQAADLL  286 (353)
T ss_dssp             BSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSS------------------CCTTTTCTTSCHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCC------------------ccHHHhcCCcCHHHHHHH
Confidence            99999999999999999888877655433221111100000000                  000112345678999999


Q ss_pred             HhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          404 QGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      .+||+.||++|||++|+|+||||+.-
T Consensus       287 ~~~L~~dp~~Rpt~~e~l~hp~f~~~  312 (353)
T 3coi_A          287 EKMLELDVDKRLTAAQALTHPFFEPF  312 (353)
T ss_dssp             HHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred             HHHcCCCcccCCCHHHHhcCcchhhc
Confidence            99999999999999999999999753

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=2.7e-49  Score=402.45  Aligned_cols=260  Identities=30%  Similarity=0.506  Sum_probs=218.6

Q ss_pred             CceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCCceEEeccee
Q 013973           92 GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  167 (433)
Q Consensus        92 ~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~  167 (433)
                      ...+.++|++.+.||+|+||.||+|.++.+++.||||++...    ......+..|+.+++++     .||||+++++++
T Consensus        21 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~   95 (484)
T 3nyv_A           21 TAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL-----DHPNIMKLYEFF   95 (484)
T ss_dssp             CCCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTC-----CCTTBCCEEEEE
T ss_pred             CCcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhC-----CCCCCCcEEEEE
Confidence            345668899999999999999999999999999999998632    23456678899999888     679999999999


Q ss_pred             ecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCC
Q 013973          168 DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  246 (433)
Q Consensus       168 ~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~  246 (433)
                      .+.+.+|+||||+ +++|.+++....  .+++..+..++.||+.||.|||++|||||||||+|||++..           
T Consensus        96 ~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~-----------  162 (484)
T 3nyv_A           96 EDKGYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESK-----------  162 (484)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHTCS--CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSS-----------
T ss_pred             EeCCEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecC-----------
Confidence            9999999999999 999999998754  79999999999999999999999999999999999999532           


Q ss_pred             CCCCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 013973          247 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                                   +.++.+||+|||++.......  ...+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.
T Consensus       163 -------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~  228 (484)
T 3nyv_A          163 -------------SKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFN  228 (484)
T ss_dssp             -------------STTCCEEECCTTHHHHBCCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             -------------CCCCcEEEEeeeeeEEcccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCC
Confidence                         245678999999887654433  23579999999999987 69999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHH
Q 013973          325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  404 (433)
Q Consensus       325 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  404 (433)
                      +.+..+.+..+......                       .+.                      +.+..+++++++||.
T Consensus       229 ~~~~~~~~~~i~~~~~~-----------------------~~~----------------------~~~~~~s~~~~~li~  263 (484)
T 3nyv_A          229 GANEYDILKKVEKGKYT-----------------------FEL----------------------PQWKKVSESAKDLIR  263 (484)
T ss_dssp             CSSHHHHHHHHHHCCCC-----------------------CCS----------------------GGGGGSCHHHHHHHH
T ss_pred             CCCHHHHHHHHHcCCCC-----------------------CCC----------------------cccccCCHHHHHHHH
Confidence            88877666554332111                       110                      112346778999999


Q ss_pred             hccccCCCCCCCHHHHhcCCCCCC
Q 013973          405 GLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       405 ~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      +||+.||.+|||+.|+|+||||+.
T Consensus       264 ~~L~~dp~~R~s~~e~l~h~~~~~  287 (484)
T 3nyv_A          264 KMLTYVPSMRISARDALDHEWIQT  287 (484)
T ss_dssp             HHTCSSGGGSCCHHHHHTSHHHHH
T ss_pred             HHCCCChhHCcCHHHHhhChhhcc
Confidence            999999999999999999999964

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=1.8e-48  Score=374.13  Aligned_cols=275  Identities=24%  Similarity=0.414  Sum_probs=203.0

Q ss_pred             ecCcEEEE-eeeeccccEEEEEEEECCCCeEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           95 LTSRYKIH-SKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        95 ~~~~~~~~-~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      +.++|++. +.||+|+||.||+|.+..+++.||||++.... .....+.+|+.++.++.    .|+||+++++++.+.+.
T Consensus        10 ~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~----~h~~i~~~~~~~~~~~~   85 (316)
T 2ac3_A           10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQ----GHRNVLELIEFFEEEDR   85 (316)
T ss_dssp             TTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTC----CCTTBCCEEEEEEETTE
T ss_pred             cceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhc----CCCCeeeEEEEEeeCCE
Confidence            45679996 78999999999999999999999999997432 33566778999888752    57899999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +|+||||+ +++|.+++....  .+++..+..++.||+.||+|||++|||||||||+|||++.++.              
T Consensus        86 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~--------------  149 (316)
T 2ac3_A           86 FYLVFEKMRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQ--------------  149 (316)
T ss_dssp             EEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSS--------------
T ss_pred             EEEEEEcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCC--------------
Confidence            99999999 899999998764  7999999999999999999999999999999999999965432              


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCC----------CCceeecCcccchhhhhC-----CCCCCcchhHHHHHHHHHH
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPD----------QNYIVSTRHYRAPEVILG-----LGWTYPCDIWSVGCILVEL  316 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGv~l~el  316 (433)
                                ...+||+|||++......          ....+||+.|+|||++.+     ..++.++|||||||++|+|
T Consensus       150 ----------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l  219 (316)
T 2ac3_A          150 ----------VSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYIL  219 (316)
T ss_dssp             ----------SCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHH
T ss_pred             ----------cCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHH
Confidence                      123666666665432211          123469999999999975     4588999999999999999


Q ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCch
Q 013973          317 CTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA  396 (433)
Q Consensus       317 ltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (433)
                      ++|..||.+....+.....    ....    ..........+..+...++.                      .....++
T Consensus       220 ~~g~~pf~~~~~~~~~~~~----~~~~----~~~~~~~~~~i~~~~~~~~~----------------------~~~~~~~  269 (316)
T 2ac3_A          220 LSGYPPFVGRCGSDCGWDR----GEAC----PACQNMLFESIQEGKYEFPD----------------------KDWAHIS  269 (316)
T ss_dssp             HHSSCSCCCCCCSCSCC--------CC----HHHHHHHHHHHHHCCCCCCH----------------------HHHTTSC
T ss_pred             HHCCCCCcccccccccccc----cccc----hhHHHHHHHHHhccCcccCc----------------------hhcccCC
Confidence            9999999765321100000    0000    00000000011111111111                      1123567


Q ss_pred             hHHHHHHHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          397 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       397 ~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      .++.+||.+||+.||.+|||+.|+|+||||++.
T Consensus       270 ~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~  302 (316)
T 2ac3_A          270 CAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGC  302 (316)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC--
T ss_pred             HHHHHHHHHHhhCChhhCCCHHHHhcChhhcCC
Confidence            789999999999999999999999999999864

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=6.4e-49  Score=399.91  Aligned_cols=258  Identities=31%  Similarity=0.525  Sum_probs=215.8

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      .+.++|++++.||+|+||+||+|.++.+++.||||++...   ......+..|+.+++++     .||||+++++++.+.
T Consensus        19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~~   93 (486)
T 3mwu_A           19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-----DHPNIMKLFEILEDS   93 (486)
T ss_dssp             HHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHC-----CCTTBCCEEEEEECS
T ss_pred             ChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhC-----CCCCcCeEEEEEEcC
Confidence            3557899999999999999999999999999999998632   22346678899999998     679999999999999


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      +.+|+||||+ +++|.+++....  .+++..+..++.||+.||.|||++|||||||||+|||++..              
T Consensus        94 ~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~--------------  157 (486)
T 3mwu_A           94 SSFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESK--------------  157 (486)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSS--------------
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecC--------------
Confidence            9999999999 899999988764  79999999999999999999999999999999999999542              


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                                +.++.+||+|||++.......  ...+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+
T Consensus       158 ----------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~  226 (486)
T 3mwu_A          158 ----------EKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN  226 (486)
T ss_dssp             ----------STTCCEEECSCSCTTTBCCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ----------CCCCCEEEEECCcCeECCCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                      234568888888886544332  33579999999999986 59999999999999999999999999887


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ..+.+..+.......+                       .                      +.+..++.++++||.+||
T Consensus       227 ~~~~~~~i~~~~~~~~-----------------------~----------------------~~~~~~s~~~~~li~~~L  261 (486)
T 3mwu_A          227 EYDILKRVETGKYAFD-----------------------L----------------------PQWRTISDDAKDLIRKML  261 (486)
T ss_dssp             HHHHHHHHHHTCCCSC-----------------------S----------------------GGGGGSCHHHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCC-----------------------C----------------------cccCCCCHHHHHHHHHHc
Confidence            7766655433211111                       0                      112346778999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCC
Q 013973          408 RYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       408 ~~dP~~R~ta~ell~hp~f~~  428 (433)
                      +.||.+|||+.|+|+||||+.
T Consensus       262 ~~dp~~R~t~~~~l~hp~~~~  282 (486)
T 3mwu_A          262 TFHPSLRITATQCLEHPWIQK  282 (486)
T ss_dssp             CSSTTTSCCHHHHHHCHHHHH
T ss_pred             CCChhhCcCHHHHhcCHhhcc
Confidence            999999999999999999974

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=3.1e-48  Score=373.96  Aligned_cols=252  Identities=25%  Similarity=0.419  Sum_probs=207.6

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  176 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV  176 (433)
                      .|...+.||+|+||.||+|.++.+|+.||||++.... ...+.+..|+.+++.+     .|+||+++++++...+..++|
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~lv  120 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY-----QHFNVVEMYKSYLVGEELWVL  120 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTC-----CCTTBCCEEEEEEETTEEEEE
T ss_pred             hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhC-----CCCCcceEEEEEEECCEEEEE
Confidence            4888899999999999999999999999999987433 3345677889888877     678999999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          177 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       177 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      |||+ +++|.+++...   .+++..+..++.||+.||.|||+.||+||||||+|||++.                     
T Consensus       121 ~e~~~~~~L~~~l~~~---~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~---------------------  176 (321)
T 2c30_A          121 MEFLQGGALTDIVSQV---RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTL---------------------  176 (321)
T ss_dssp             ECCCCSCBHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT---------------------
T ss_pred             EecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC---------------------
Confidence            9999 89999998653   6999999999999999999999999999999999999954                     


Q ss_pred             cccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHH
Q 013973          256 FKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL  332 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~  332 (433)
                            ++.+||+|||++......   ....+||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+..
T Consensus       177 ------~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~  250 (321)
T 2c30_A          177 ------DGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM  250 (321)
T ss_dssp             ------TCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred             ------CCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                  445677777766543322   23357999999999999999999999999999999999999999877665544


Q ss_pred             HHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCC
Q 013973          333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPT  412 (433)
Q Consensus       333 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  412 (433)
                      ..+.....+.                      .                        .....+++++.+||.+||+.||+
T Consensus       251 ~~~~~~~~~~----------------------~------------------------~~~~~~~~~l~~li~~~l~~dp~  284 (321)
T 2c30_A          251 KRLRDSPPPK----------------------L------------------------KNSHKVSPVLRDFLERMLVRDPQ  284 (321)
T ss_dssp             HHHHHSSCCC----------------------C------------------------TTGGGSCHHHHHHHHHHSCSSTT
T ss_pred             HHHhcCCCCC----------------------c------------------------CccccCCHHHHHHHHHHccCChh
Confidence            3332210000                      0                        00123567899999999999999


Q ss_pred             CCCCHHHHhcCCCCCCCC
Q 013973          413 DRLTAREALRHPFFTRDH  430 (433)
Q Consensus       413 ~R~ta~ell~hp~f~~~~  430 (433)
                      +|||+.|+|+||||.+..
T Consensus       285 ~Rps~~ell~hp~~~~~~  302 (321)
T 2c30_A          285 ERATAQELLDHPFLLQTG  302 (321)
T ss_dssp             TSCCHHHHHTSGGGGGCC
T ss_pred             hCcCHHHHhcChhhccCC
Confidence            999999999999998654

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=1.6e-48  Score=377.37  Aligned_cols=282  Identities=28%  Similarity=0.465  Sum_probs=221.7

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      .++|++++.||+|+||.||+|.+..+++.||+|++...   ......+..|+.+++.+     .|+||+++++++...+.
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~   98 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL-----RHENLVNLLEVCKKKKR   98 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEEETTE
T ss_pred             hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhC-----CCCCEeeEEEEeecCCE
Confidence            46799999999999999999999999999999998533   23345567899999988     67899999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      .++||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.                 
T Consensus        99 ~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~-----------------  159 (331)
T 4aaa_A           99 WYLVFEFVDHTILDDLELFPN--GLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQ-----------------  159 (331)
T ss_dssp             EEEEEECCSEEHHHHHHHSTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT-----------------
T ss_pred             EEEEEecCCcchHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcC-----------------
Confidence            99999999 666666655443  6999999999999999999999999999999999999954                 


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                                ++.+||+|||.+.......   ....||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+
T Consensus       160 ----------~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  229 (331)
T 4aaa_A          160 ----------SGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDS  229 (331)
T ss_dssp             ----------TSCEEECCCTTC------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             ----------CCcEEEEeCCCceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence                      4456677777665433221   234789999999999875 68999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ..+....+....+..++............    .....+....              ........+.++.++.+||.+||
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~--------------~~~~~~~~~~~~~~l~~li~~~L  291 (331)
T 4aaa_A          230 DIDQLYHIMMCLGNLIPRHQELFNKNPVF----AGVRLPEIKE--------------REPLERRYPKLSEVVIDLAKKCL  291 (331)
T ss_dssp             HHHHHHHHHHHHCSCCHHHHHHHHHCGGG----TTCCCCCCSS--------------CCCHHHHSTTSCHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHhCCCChhhhhHhhhcccc----ccccCccccc--------------cchhhhcccchhHHHHHHHHHHh
Confidence            99999888888888887655443322111    0111111000              00111223467889999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCC
Q 013973          408 RYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       408 ~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      +.||++|||+.|+|+||||+..
T Consensus       292 ~~dP~~Rpt~~ell~hp~f~~~  313 (331)
T 4aaa_A          292 HIDPDKRPFCAELLHHDFFQMD  313 (331)
T ss_dssp             CSSGGGSCCGGGGGGSHHHHGG
T ss_pred             ccCcccCCCHHHHhcCchhccC
Confidence            9999999999999999999764

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=1.6e-48  Score=367.96  Aligned_cols=251  Identities=25%  Similarity=0.428  Sum_probs=207.0

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++....    .....+..|+.+++.+     .|+||+++++++.+.+
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~   82 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-----RHPNILRLYGYFHDAT   82 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTC-----CCTTBCCEEEEEECSS
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcC-----CCCCCcchhheEecCC
Confidence            467999999999999999999999999999999986432    1234566788887777     6789999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      ..++||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.                
T Consensus        83 ~~~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~----------------  144 (279)
T 3fdn_A           83 RVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS----------------  144 (279)
T ss_dssp             EEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECT----------------
T ss_pred             EEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcC----------------
Confidence            999999999 889999998764  7999999999999999999999999999999999999954                


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCC-CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChH
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  329 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~  329 (433)
                                 ++.++|+|||++....... ....||+.|+|||++.+..++.++||||||+++|+|++|..||...+..
T Consensus       145 -----------~~~~~l~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~  213 (279)
T 3fdn_A          145 -----------AGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ  213 (279)
T ss_dssp             -----------TSCEEECSCCEESCC--------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred             -----------CCCEEEEeccccccCCcccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH
Confidence                       4456666666654332222 3357899999999999999999999999999999999999999987766


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +....+......                                                 .+...+.++.+||.+||+.
T Consensus       214 ~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~li~~~l~~  244 (279)
T 3fdn_A          214 ETYKRISRVEFT-------------------------------------------------FPDFVTEGARDLISRLLKH  244 (279)
T ss_dssp             HHHHHHHHTCCC-------------------------------------------------CCTTSCHHHHHHHHHHCCS
T ss_pred             HHHHHHHhCCCC-------------------------------------------------CCCcCCHHHHHHHHHHhcc
Confidence            555443322111                                                 1234567899999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCC
Q 013973          410 DPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       410 dP~~R~ta~ell~hp~f~~~  429 (433)
                      ||.+|||+.|+|+||||+..
T Consensus       245 ~p~~Rps~~e~l~h~~~~~~  264 (279)
T 3fdn_A          245 NPSQRPMLREVLEHPWITAN  264 (279)
T ss_dssp             SGGGSCCHHHHHHCHHHHHH
T ss_pred             ChhhCCCHHHHhhCccccCC
Confidence            99999999999999999754

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=2.7e-48  Score=366.92  Aligned_cols=259  Identities=24%  Similarity=0.460  Sum_probs=214.0

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-------hhHHHHHHHHHHHHHHHhcCCCCCceEEeccee
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  167 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~  167 (433)
                      +.++|++.+.||+|+||.||+|.+..+++.||+|+++...       ...+.+..|+.+++.+     .|+||+++++++
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~   77 (283)
T 3bhy_A            3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI-----RHPNIITLHDIF   77 (283)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-----CCTTBCCEEEEE
T ss_pred             hhhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhC-----CCCCeeehhhee
Confidence            3467999999999999999999999999999999986432       1356678899999988     578999999999


Q ss_pred             ecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCC
Q 013973          168 DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  246 (433)
Q Consensus       168 ~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~  246 (433)
                      ...+..++||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++          
T Consensus        78 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~----------  145 (283)
T 3bhy_A           78 ENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKN----------  145 (283)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSS----------
T ss_pred             cCCCeEEEEEeecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCC----------
Confidence            9999999999999 899999998754  799999999999999999999999999999999999996543          


Q ss_pred             CCCCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 013973          247 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                                   .....+||+|||.+.......  ....||+.|+|||++.+..++.++||||||+++|+|++|..||.
T Consensus       146 -------------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  212 (283)
T 3bhy_A          146 -------------VPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL  212 (283)
T ss_dssp             -------------SSSCCEEECCCTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             -------------CCCCceEEEecccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCC
Confidence                         223478888888886543322  33478999999999999999999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHH
Q 013973          325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  404 (433)
Q Consensus       325 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  404 (433)
                      +.+..+....+.......+.                                             ..+...+..+.+||.
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~li~  247 (283)
T 3bhy_A          213 GETKQETLTNISAVNYDFDE---------------------------------------------EYFSNTSELAKDFIR  247 (283)
T ss_dssp             CSSHHHHHHHHHTTCCCCCH---------------------------------------------HHHTTCCHHHHHHHH
T ss_pred             CcchHHHHHHhHhcccCCcc---------------------------------------------hhcccCCHHHHHHHH
Confidence            87766555443222111111                                             112356778999999


Q ss_pred             hccccCCCCCCCHHHHhcCCCCCC
Q 013973          405 GLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       405 ~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      +||+.||++|||+.|+++||||+.
T Consensus       248 ~~l~~dp~~Rps~~~~l~h~~~~~  271 (283)
T 3bhy_A          248 RLLVKDPKRRMTIAQSLEHSWIKA  271 (283)
T ss_dssp             TTSCSSGGGSCCHHHHHHCHHHHH
T ss_pred             HHccCCHhHCcCHHHHHhCHHHHH
Confidence            999999999999999999999974

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=1e-47  Score=371.20  Aligned_cols=285  Identities=25%  Similarity=0.495  Sum_probs=213.8

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec--CCeE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY--RNHI  173 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~--~~~~  173 (433)
                      .++|++++.||+|+||.||+|.+..+++.||||+++..  ..+.+..|+.+++.+.    +|+||+++++++..  ....
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~E~~~l~~l~----~~~~i~~~~~~~~~~~~~~~  108 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLR----GGPNIITLADIVKDPVSRTP  108 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--CHHHHHHHHHHHHHHT----TSTTBCCEEEEEECTTTCCE
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc--chHHHHHHHHHHHHcC----CCCCEEEeeeeeccCCCCce
Confidence            47899999999999999999999999999999999743  3456788999999994    36889999999987  6789


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      ++||||+ +++|.+++.     .+++..+..++.||+.||+|||++||+||||||+|||++.++                
T Consensus       109 ~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~----------------  167 (330)
T 3nsz_A          109 ALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH----------------  167 (330)
T ss_dssp             EEEEECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTT----------------
T ss_pred             EEEEeccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCC----------------
Confidence            9999999 889988874     489999999999999999999999999999999999996432                


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCC-CCCh
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQ-THEN  328 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~-~~~~  328 (433)
                                ..+||+|||++.......  ....||..|+|||++.+ ..++.++|||||||++|+|++|..||. +.+.
T Consensus       168 ----------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~  237 (330)
T 3nsz_A          168 ----------RKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN  237 (330)
T ss_dssp             ----------TEEEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH
T ss_pred             ----------CEEEEEeCCCceEcCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch
Confidence                      357777777776443322  33578999999999987 679999999999999999999999994 4555


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHH-HHHhhhcCCchhHHHHHHHhcc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ-NLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      .+.+..+...++..  .....+        .......+..   ...+.......... .........++.++.+||.+||
T Consensus       238 ~~~l~~~~~~~~~~--~~~~~~--------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  304 (330)
T 3nsz_A          238 YDQLVRIAKVLGTE--DLYDYI--------DKYNIELDPR---FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLL  304 (330)
T ss_dssp             HHHHHHHHHHHCHH--HHHHHH--------HHTTCCCCTH---HHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTS
T ss_pred             HHHHHHHHHhcCCc--hhhhHH--------HHhccccccc---hhhhhhhccccchhhhccccccccCCHHHHHHHHHHh
Confidence            66666666665531  111111        1111110000   00000000000000 0001112336789999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCC
Q 013973          408 RYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       408 ~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      +.||++|||++|+|+||||++..
T Consensus       305 ~~dP~~Rpta~e~l~hp~f~~~~  327 (330)
T 3nsz_A          305 RYDHQSRLTAREAMEHPYFYTVV  327 (330)
T ss_dssp             CSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             cCCcccCCCHHHHhcCccHhhhc
Confidence            99999999999999999998754

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=1e-47  Score=370.47  Aligned_cols=284  Identities=29%  Similarity=0.482  Sum_probs=221.6

Q ss_pred             cCcEEEEeeeeccccEEEEEEEEC-CCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceee---
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDR-ERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD---  168 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~-~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~---  168 (433)
                      .++|++++.||+|+||.||+|.+. .+++.||+|+++...   ........|+.+++.+...  .|+||+++++++.   
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~--~h~~i~~~~~~~~~~~   87 (326)
T 1blx_A           10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF--EHPNVVRLFDVCTVSR   87 (326)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHT--CCTTBCCEEEEEEEEE
T ss_pred             hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhcc--CCCCeEeeeeeeeecc
Confidence            478999999999999999999995 678999999986322   1223456788888887542  5688999999886   


Q ss_pred             --cCCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCC
Q 013973          169 --YRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  246 (433)
Q Consensus       169 --~~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~  246 (433)
                        ....+++||||++++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.+           
T Consensus        88 ~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~-----------  156 (326)
T 1blx_A           88 TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSS-----------  156 (326)
T ss_dssp             CSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT-----------
T ss_pred             cCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCC-----------
Confidence              5678999999998899999988765679999999999999999999999999999999999999544           


Q ss_pred             CCCCCCCcccccCCCCCCEEEEecCCccccCCC--CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 013973          247 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                                      +.+||+|||.+......  .....||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus       157 ----------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  220 (326)
T 1blx_A          157 ----------------GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFR  220 (326)
T ss_dssp             ----------------CCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             ----------------CCEEEecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCC
Confidence                            45666666666543321  123478999999999999999999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHH
Q 013973          325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  404 (433)
Q Consensus       325 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  404 (433)
                      +.+..+.+..+....+..+...+                  +...........    .............++.++.+||.
T Consensus       221 ~~~~~~~~~~i~~~~~~~~~~~~------------------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~li~  278 (326)
T 1blx_A          221 GSSDVDQLGKILDVIGLPGEEDW------------------PRDVALPRQAFH----SKSAQPIEKFVTDIDELGKDLLL  278 (326)
T ss_dssp             CSSHHHHHHHHHHHHCCCCGGGS------------------CTTCSSCGGGSC----CCCCCCGGGTCCSCCHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHcCCCCcccC------------------ccccccchhhhc----ccCcchhhhccccCCHHHHHHHH
Confidence            98888888888777766553321                  111000000000    00000112234567889999999


Q ss_pred             hccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          405 GLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       405 ~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      +||+.||++|||+.|+|+||||++..
T Consensus       279 ~~L~~dP~~Rpt~~e~l~hp~~~~~~  304 (326)
T 1blx_A          279 KCLTFNPAKRISAYSALSHPYFQDLE  304 (326)
T ss_dssp             HHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             HHcCCCcccCCCHHHHhcCccccccc
Confidence            99999999999999999999998754

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=1.6e-47  Score=375.47  Aligned_cols=257  Identities=30%  Similarity=0.524  Sum_probs=209.9

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---------hhHHHHHHHHHHHHHHHhcCCCCCceEEec
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---------KYREAAMIEIEVLQQLAKHDKGGNRCVQIR  164 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---------~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~  164 (433)
                      .+.++|++.+.||+|+||.||+|.++.+|+.||||+++...         ...+.+..|+.+++.+.    +|+||+.++
T Consensus        91 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~----~hp~iv~~~  166 (365)
T 2y7j_A           91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVA----GHPHIITLI  166 (365)
T ss_dssp             HHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHT----TCTTBCCEE
T ss_pred             hhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhc----CCCCEeEEE
Confidence            44578999999999999999999999999999999986422         12445677889888883    468899999


Q ss_pred             ceeecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCC
Q 013973          165 NWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY  243 (433)
Q Consensus       165 ~~~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~df  243 (433)
                      +++...+..|+||||+ |++|.+++....  .+++..+..++.||+.||.|||+.||+||||||+|||++.         
T Consensus       167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~---------  235 (365)
T 2y7j_A          167 DSYESSSFMFLVFDLMRKGELFDYLTEKV--ALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDD---------  235 (365)
T ss_dssp             EEEEBSSEEEEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT---------
T ss_pred             EEEeeCCEEEEEEEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC---------
Confidence            9999999999999999 889999998754  7999999999999999999999999999999999999954         


Q ss_pred             cCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhC------CCCCCcchhHHHHHHHHH
Q 013973          244 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILG------LGWTYPCDIWSVGCILVE  315 (433)
Q Consensus       244 g~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~------~~~~~~~DvwSlGv~l~e  315 (433)
                                        ++.+||+|||++.......  ...+||+.|+|||++.+      ..++.++|||||||++|+
T Consensus       236 ------------------~~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~e  297 (365)
T 2y7j_A          236 ------------------NMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFT  297 (365)
T ss_dssp             ------------------TCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHH
T ss_pred             ------------------CCCEEEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHH
Confidence                              4566777777665443322  33579999999999974      358899999999999999


Q ss_pred             HHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCc
Q 013973          316 LCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS  395 (433)
Q Consensus       316 lltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (433)
                      |++|..||...+.......+.......+.                                             ..+...
T Consensus       298 ll~g~~pf~~~~~~~~~~~i~~~~~~~~~---------------------------------------------~~~~~~  332 (365)
T 2y7j_A          298 LLAGSPPFWHRRQILMLRMIMEGQYQFSS---------------------------------------------PEWDDR  332 (365)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHTCCCCCH---------------------------------------------HHHSSS
T ss_pred             HHHCCCCCCCCCHHHHHHHHHhCCCCCCC---------------------------------------------cccccC
Confidence            99999999887665554443322111110                                             112356


Q ss_pred             hhHHHHHHHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       396 ~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      +.++.+||.+||+.||++|||+.|+|+||||++
T Consensus       333 ~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r  365 (365)
T 2y7j_A          333 SSTVKDLISRLLQVDPEARLTAEQALQHPFFER  365 (365)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence            778999999999999999999999999999974

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=7.2e-48  Score=377.24  Aligned_cols=284  Identities=24%  Similarity=0.421  Sum_probs=218.6

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch------------hhHHHHHHHHHHHHHHHhcCCCCCceE
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK------------KYREAAMIEIEVLQQLAKHDKGGNRCV  161 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~------------~~~~~~~~E~~~l~~l~~~~~~~~~i~  161 (433)
                      .+.++|++.+.||+|+||.||+|.+.. ++.||||++....            ...+.+..|+.+++.+     .|+||+
T Consensus        19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv   92 (362)
T 3pg1_A           19 AMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF-----HHPNIL   92 (362)
T ss_dssp             HTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHC-----CCTTBC
T ss_pred             HhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhC-----CCcCcc
Confidence            456789999999999999999999865 8889999885321            1236678899999988     678999


Q ss_pred             Eecceee-----cCCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccC
Q 013973          162 QIRNWFD-----YRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSE  236 (433)
Q Consensus       162 ~~~~~~~-----~~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~  236 (433)
                      ++++++.     ....+|+||||++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.  
T Consensus        93 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~--  169 (362)
T 3pg1_A           93 GLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR-IVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLAD--  169 (362)
T ss_dssp             CCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT--
T ss_pred             ceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcC--
Confidence            9999983     445799999999889999988543 47999999999999999999999999999999999999954  


Q ss_pred             ccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC--CCceeecCcccchhhhhC-CCCCCcchhHHHHHHH
Q 013973          237 YIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCIL  313 (433)
Q Consensus       237 ~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l  313 (433)
                                               ++.+||+|||.+......  .....||+.|+|||++.+ ..++.++|||||||++
T Consensus       170 -------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il  224 (362)
T 3pg1_A          170 -------------------------NNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVM  224 (362)
T ss_dssp             -------------------------TCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHH
T ss_pred             -------------------------CCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHH
Confidence                                     455677777766533222  233578999999999987 6799999999999999


Q ss_pred             HHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhh-hhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhc
Q 013973          314 VELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDR-HAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV  392 (433)
Q Consensus       314 ~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (433)
                      |+|++|..||.+.+..+.+..+....+..+......... ....++.......+..                  ......
T Consensus       225 ~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~  286 (362)
T 3pg1_A          225 AEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPAR------------------AWTAVV  286 (362)
T ss_dssp             HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCC------------------CHHHHS
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChh------------------hHHhhC
Confidence            999999999999999999999999888877654433221 1122222211111110                  011233


Q ss_pred             CCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          393 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       393 ~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      ...++.+.+||.+||+.||++|||+.|+|+||||++.
T Consensus       287 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  323 (362)
T 3pg1_A          287 PTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESL  323 (362)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             CCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhc
Confidence            4667889999999999999999999999999999864

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=5.7e-48  Score=374.25  Aligned_cols=252  Identities=29%  Similarity=0.439  Sum_probs=210.6

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .++|.+.+.||+|+||.||+|.+..+++.||+|++...    ....+.+..|+.+++.+     .|+||+++++++.+.+
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~  114 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-----AHQHVVGFHGFFEDND  114 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEEECSS
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEecCC
Confidence            46799999999999999999999999999999998643    23455677788888877     6789999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+|+||||+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.                
T Consensus       115 ~~~lv~e~~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~----------------  176 (335)
T 2owb_A          115 FVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE----------------  176 (335)
T ss_dssp             EEEEEECCCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT----------------
T ss_pred             eEEEEEecCCCCCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcC----------------
Confidence            999999999 889999988754  7999999999999999999999999999999999999954                


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                                 ++.+||+|||++......   .....||+.|+|||++.+..++.++||||||+++|+|++|..||....
T Consensus       177 -----------~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  245 (335)
T 2owb_A          177 -----------DLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC  245 (335)
T ss_dssp             -----------TCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             -----------CCCEEEeeccCceecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC
Confidence                       445677777766543321   233579999999999999999999999999999999999999998776


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ..+....+...                       ...                          .+..++.++.+||.+||
T Consensus       246 ~~~~~~~~~~~-----------------------~~~--------------------------~~~~~~~~~~~li~~~l  276 (335)
T 2owb_A          246 LKETYLRIKKN-----------------------EYS--------------------------IPKHINPVAASLIQKML  276 (335)
T ss_dssp             HHHHHHHHHHT-----------------------CCC--------------------------CCTTSCHHHHHHHHHHT
T ss_pred             HHHHHHHHhcC-----------------------CCC--------------------------CCccCCHHHHHHHHHHc
Confidence            55544332211                       111                          12345678999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCC
Q 013973          408 RYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       408 ~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      +.||++|||+.|+|+||||+...
T Consensus       277 ~~dp~~Rps~~ell~~~~~~~~~  299 (335)
T 2owb_A          277 QTDPTARPTINELLNDEFFTSGY  299 (335)
T ss_dssp             CSSGGGSCCGGGGGGSHHHHTSC
T ss_pred             cCChhHCcCHHHHhcCccccCCC
Confidence            99999999999999999998654

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=2.9e-48  Score=366.86  Aligned_cols=274  Identities=21%  Similarity=0.293  Sum_probs=205.8

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      .+.++|++++.||+|+||.||+|.+..+++.||+|+++..   .........|+..+..+.    .|+||+++++++.+.
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~----~h~~iv~~~~~~~~~   83 (289)
T 1x8b_A            8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG----QHSHVVRYFSAWAED   83 (289)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSC----SCTTBCCEEEEEEET
T ss_pred             cccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhC----CCCCeeeeeeeeecC
Confidence            4567899999999999999999999999999999998742   233455666777776662    568899999999999


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNY--RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                      +.+++||||+ +++|.+++.....  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.....+.....
T Consensus        84 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~  163 (289)
T 1x8b_A           84 DHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDE  163 (289)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------
T ss_pred             CeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccccccc
Confidence            9999999999 8899999976421  469999999999999999999999999999999999999877755544332111


Q ss_pred             CCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                      ..        .......+||+|||.+....... ...||+.|+|||++.+. .++.++|||||||++|+|++|.+|+...
T Consensus       164 ~~--------~~~~~~~~kl~Dfg~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~  234 (289)
T 1x8b_A          164 DD--------WASNKVMFKIGDLGHVTRISSPQ-VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG  234 (289)
T ss_dssp             --------------CCCEEECCCTTCEETTCSC-CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS
T ss_pred             cc--------ccCCceEEEEcccccccccCCcc-ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch
Confidence            00        01345689999999987665433 34699999999999876 5668999999999999999999887543


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      ......                          ..+..                         ...+..++.++.+||.+|
T Consensus       235 ~~~~~~--------------------------~~~~~-------------------------~~~~~~~~~~~~~li~~~  263 (289)
T 1x8b_A          235 DQWHEI--------------------------RQGRL-------------------------PRIPQVLSQEFTELLKVM  263 (289)
T ss_dssp             HHHHHH--------------------------HTTCC-------------------------CCCSSCCCHHHHHHHHHH
T ss_pred             hHHHHH--------------------------HcCCC-------------------------CCCCcccCHHHHHHHHHH
Confidence            221111                          01100                         011235678899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFTRDHL  431 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~~~~~  431 (433)
                      |+.||++|||+.|+++||||++...
T Consensus       264 l~~dp~~Rps~~~ll~h~~~~~~~~  288 (289)
T 1x8b_A          264 IHPDPERRPSAMALVKHSVLLSASR  288 (289)
T ss_dssp             TCSSGGGSCCHHHHHTCTTC-----
T ss_pred             hCCCcccCCCHHHHhhChHhhhhcc
Confidence            9999999999999999999997654

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=5.1e-48  Score=375.80  Aligned_cols=252  Identities=28%  Similarity=0.452  Sum_probs=199.1

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      .++|++++.||+|+||.||+|.+. +++.||||++...   ....+.+..|+.+++.+.+   ++++|+++++++...+.
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~---~~~~iv~~~~~~~~~~~   83 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ---HSDKIIRLYDYEITDQY   83 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTT---TCTTBCCEEEEEECSSE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhh---cCCceEEEeeeEeeCCE
Confidence            467999999999999999999884 5888999998643   2334567789999999965   34789999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          173 ICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       173 ~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      +|+|||+.+++|.+++....  .+++.++..++.||+.||+|||++|||||||||+|||++ ++                
T Consensus        84 ~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~----------------  144 (343)
T 3dbq_A           84 IYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DG----------------  144 (343)
T ss_dssp             EEEEECCCSEEHHHHHHHSC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TT----------------
T ss_pred             EEEEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CC----------------
Confidence            99999977999999998764  799999999999999999999999999999999999994 23                


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhC-----------CCCCCcchhHHHHHHHHHH
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILG-----------LGWTYPCDIWSVGCILVEL  316 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGv~l~el  316 (433)
                                 .+||+|||++.......     ...+||+.|+|||++.+           ..++.++|||||||++|||
T Consensus       145 -----------~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~el  213 (343)
T 3dbq_A          145 -----------MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYM  213 (343)
T ss_dssp             -----------EEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHH
T ss_pred             -----------cEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHH
Confidence                       46666666665443222     23479999999999975           6789999999999999999


Q ss_pred             HhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCc
Q 013973          317 CTGEALFQTHENL-EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS  395 (433)
Q Consensus       317 ltg~~Pf~~~~~~-~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (433)
                      ++|..||...... ..+..   ...+                  .....                          .+...
T Consensus       214 l~g~~pf~~~~~~~~~~~~---~~~~------------------~~~~~--------------------------~~~~~  246 (343)
T 3dbq_A          214 TYGKTPFQQIINQISKLHA---IIDP------------------NHEIE--------------------------FPDIP  246 (343)
T ss_dssp             HHSSCTTTTCCSHHHHHHH---HHCT------------------TSCCC--------------------------CCCCS
T ss_pred             HhCCCcchhhhhHHHHHHH---HhcC------------------CcccC--------------------------CcccC
Confidence            9999999764332 11111   1100                  00111                          12345


Q ss_pred             hhHHHHHHHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       396 ~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      +.++.+||.+||+.||.+|||+.|+|+||||+.
T Consensus       247 ~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~  279 (343)
T 3dbq_A          247 EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI  279 (343)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred             CHHHHHHHHHHcCCChhHCCCHHHHHhCccccc
Confidence            668999999999999999999999999999964

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=4.4e-48  Score=376.92  Aligned_cols=255  Identities=26%  Similarity=0.375  Sum_probs=208.6

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      ..+.|++++.||+|+||.||+|++..+++.||||++...    ....+.+..|+.+++.+     .|+||+++++++...
T Consensus        52 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~~  126 (348)
T 1u5q_A           52 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-----RHPNTIQYRGCYLRE  126 (348)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEEET
T ss_pred             hhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEEEC
Confidence            346799999999999999999999999999999998632    22335677899999988     678999999999999


Q ss_pred             CeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          171 NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       171 ~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      +..++||||+.|+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++              
T Consensus       127 ~~~~lv~e~~~g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~--------------  191 (348)
T 1u5q_A          127 HTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG--------------  191 (348)
T ss_dssp             TEEEEEEECCSEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT--------------
T ss_pred             CeEEEEEecCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC--------------
Confidence            9999999999889999886543 4799999999999999999999999999999999999996544              


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhh---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                                   .+||+|||++...... ...+||+.|+|||++.   ...++.++|||||||++|||++|..||...+
T Consensus       192 -------------~~kL~DfG~a~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~  257 (348)
T 1u5q_A          192 -------------LVKLGDFGSASIMAPA-NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN  257 (348)
T ss_dssp             -------------EEEECCCTTCBSSSSB-CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             -------------CEEEeeccCceecCCC-CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence                         5666666666544322 2347999999999996   4678999999999999999999999998877


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ..+.+..+.....+                      ..                         ....++..+.+||.+||
T Consensus       258 ~~~~~~~~~~~~~~----------------------~~-------------------------~~~~~~~~l~~li~~~l  290 (348)
T 1u5q_A          258 AMSALYHIAQNESP----------------------AL-------------------------QSGHWSEYFRNFVDSCL  290 (348)
T ss_dssp             HHHHHHHHHHSCCC----------------------CC-------------------------CCTTSCHHHHHHHHHHT
T ss_pred             hHHHHHHHHhcCCC----------------------CC-------------------------CCCCCCHHHHHHHHHHc
Confidence            65544332221000                      00                         01245678999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCC
Q 013973          408 RYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       408 ~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      +.||++|||++|+++||||....
T Consensus       291 ~~dP~~Rps~~~ll~h~~~~~~~  313 (348)
T 1u5q_A          291 QKIPQDRPTSEVLLKHRFVLRER  313 (348)
T ss_dssp             CSSGGGSCCHHHHTTCHHHHSCC
T ss_pred             ccChhhCcCHHHHhhChhhhccC
Confidence            99999999999999999997653

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=6e-48  Score=381.75  Aligned_cols=252  Identities=27%  Similarity=0.451  Sum_probs=200.5

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      .+|++++.||+|+||.||+|.+.. ++.||||++...   ....+.+..|+.+++.+.+   +|+||+++++++...+.+
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~---~~~~iv~~~~~~~~~~~~  131 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ---HSDKIIRLYDYEITDQYI  131 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTT---TCTTBCCEEEEEECSSEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHccc---CCCeEEEEEEEEecCCEE
Confidence            469999999999999999999875 889999998643   2345667889999999965   458899999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       174 ~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      |||||+.+++|.+++....  .+++..+..++.||+.||.|||++|||||||||+|||++ +                  
T Consensus       132 ~lv~E~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~------------------  190 (390)
T 2zmd_A          132 YMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-D------------------  190 (390)
T ss_dssp             EEEEECCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-S------------------
T ss_pred             EEEEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-C------------------
Confidence            9999977999999998765  799999999999999999999999999999999999993 2                  


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhC-----------CCCCCcchhHHHHHHHHHHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILG-----------LGWTYPCDIWSVGCILVELC  317 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGv~l~ell  317 (433)
                               +.+||+|||++.......     ...+||+.|+|||++.+           ..|+.++|||||||++|||+
T Consensus       191 ---------~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell  261 (390)
T 2zmd_A          191 ---------GMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT  261 (390)
T ss_dssp             ---------SCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHH
T ss_pred             ---------CeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHH
Confidence                     346666666665443221     23479999999999976           36899999999999999999


Q ss_pred             hCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCch
Q 013973          318 TGEALFQTHENL-EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA  396 (433)
Q Consensus       318 tg~~Pf~~~~~~-~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (433)
                      +|..||...... ..+..+   ..+                  .....                          .+...+
T Consensus       262 ~G~~Pf~~~~~~~~~~~~~---~~~------------------~~~~~--------------------------~~~~~~  294 (390)
T 2zmd_A          262 YGKTPFQQIINQISKLHAI---IDP------------------NHEIE--------------------------FPDIPE  294 (390)
T ss_dssp             HSSCTTTTCCCHHHHHHHH---HCT------------------TSCCC--------------------------CCCCSC
T ss_pred             HCCCcchhhhHHHHHHHHH---hCc------------------cccCC--------------------------CCccch
Confidence            999999764332 221111   100                  00011                          122446


Q ss_pred             hHHHHHHHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          397 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       397 ~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      .++.+||.+||+.||.+|||+.|+|+||||+..
T Consensus       295 ~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~  327 (390)
T 2zmd_A          295 KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  327 (390)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             HHHHHHHHHHcccChhhCCCHHHHhhCcCcccc
Confidence            689999999999999999999999999999643

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=2.7e-47  Score=371.68  Aligned_cols=296  Identities=27%  Similarity=0.417  Sum_probs=217.7

Q ss_pred             ceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           93 ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        93 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      ..+.++|++.+.||+|+||.||+|.+..+++.||||++...  ......+..|+.+++.+     .|+||+++++++...
T Consensus         7 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~   81 (353)
T 2b9h_A            7 YNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF-----KHENIITIFNIQRPD   81 (353)
T ss_dssp             CCSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHC-----CCTTBCCEEEECCCS
T ss_pred             cccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhC-----cCCCcCCeeeeeccc
Confidence            34568899999999999999999999999999999999632  23445667899999988     678999999877653


Q ss_pred             -----CeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcC
Q 013973          171 -----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  245 (433)
Q Consensus       171 -----~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~  245 (433)
                           ...|+||||++++|.+++...   .+++..+..++.||+.||.|||++|||||||||+|||++.++.++|+|||+
T Consensus        82 ~~~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~  158 (353)
T 2b9h_A           82 SFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGL  158 (353)
T ss_dssp             CSTTCCCEEEEECCCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred             ccCccceEEEEEeccCccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEeccc
Confidence                 789999999988999999874   699999999999999999999999999999999999997666555555555


Q ss_pred             CCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCC
Q 013973          246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                      +...........          .    ...........+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.
T Consensus       159 a~~~~~~~~~~~----------~----~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  224 (353)
T 2b9h_A          159 ARIIDESAADNS----------E----PTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP  224 (353)
T ss_dssp             CEECC------------------------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             cccccccccccc----------C----ccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCC
Confidence            433321110000          0    0000001122478999999999875 678999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCCHHHHHHH--hhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          325 THENLEHLAMMERVLGPLPQHMLKRV--DRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       325 ~~~~~~~~~~i~~~~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      +.+..+.+..+....+..+.......  ......++..- ...+                  .......+..++.++.+|
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------------------~~~~~~~~~~~~~~~~~l  285 (353)
T 2b9h_A          225 GRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSL-PMYP------------------AAPLEKMFPRVNPKGIDL  285 (353)
T ss_dssp             CSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTS-CCCC------------------CCCHHHHSTTSCHHHHHH
T ss_pred             CCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcc-cCCC------------------CcchhhhcccCCHHHHHH
Confidence            99888888888877776542110000  00000000000 0000                  000112334678899999


Q ss_pred             HHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          403 LQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       403 i~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      |.+||+.||++|||+.|+|+||||+..
T Consensus       286 i~~~L~~dP~~Rpt~~ell~hp~~~~~  312 (353)
T 2b9h_A          286 LQRMLVFDPAKRITAKEALEHPYLQTY  312 (353)
T ss_dssp             HHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             HHHhcCcCcccCCCHHHHhcCcccccc
Confidence            999999999999999999999999864

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.2e-47  Score=368.49  Aligned_cols=286  Identities=27%  Similarity=0.441  Sum_probs=218.1

Q ss_pred             CceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCCceEEeccee---
Q 013973           92 GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF---  167 (433)
Q Consensus        92 ~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~---  167 (433)
                      +..+.++|++++.||+|+||.||+|.+..+++.||+|++.... ...+.+..|+.+++.+     .|+||+++++++   
T Consensus         6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~   80 (320)
T 2i6l_A            6 GFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRL-----DHDNIVKVFEILGPS   80 (320)
T ss_dssp             CEEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEECTT
T ss_pred             cCccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhc-----CCCCeeEEEEecccc
Confidence            3456789999999999999999999999999999999986432 3456677899998888     678999998876   


Q ss_pred             -----------ecCCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccC
Q 013973          168 -----------DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSE  236 (433)
Q Consensus       168 -----------~~~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~  236 (433)
                                 .....+|+||||++++|.+++..   ..+++..+..++.||+.||+|||++||+||||||+|||++.  
T Consensus        81 ~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~--  155 (320)
T 2i6l_A           81 GSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT--  155 (320)
T ss_dssp             SCBCCC----CCSCSEEEEEEECCSEEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEET--
T ss_pred             ccccccccccccccCceeEEeeccCCCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC--
Confidence                       34578999999998899999965   36999999999999999999999999999999999999963  


Q ss_pred             ccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC------CCceeecCcccchhhhhC-CCCCCcchhHHH
Q 013973          237 YIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD------QNYIVSTRHYRAPEVILG-LGWTYPCDIWSV  309 (433)
Q Consensus       237 ~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSl  309 (433)
                                              .++.+||+|||.+......      .....||..|+|||++.+ ..++.++|||||
T Consensus       156 ------------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~sl  211 (320)
T 2i6l_A          156 ------------------------EDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAA  211 (320)
T ss_dssp             ------------------------TTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHH
T ss_pred             ------------------------CCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhH
Confidence                                    2235566666665543221      123467999999999876 678999999999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHh
Q 013973          310 GCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM  389 (433)
Q Consensus       310 Gv~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (433)
                      ||++|||++|..||.+.+..+....+....+................++.... ..+.                  ....
T Consensus       212 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------------------~~~~  272 (320)
T 2i6l_A          212 GCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDM-TEPH------------------KPLT  272 (320)
T ss_dssp             HHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHT-TSCC------------------CCHH
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccc-cCCC------------------CChh
Confidence            99999999999999999888888888777776666554443332222211100 0000                  0011


Q ss_pred             hhcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          390 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       390 ~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      .....++.++.+||.+||+.||++|||+.|+|+||||+...
T Consensus       273 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  313 (320)
T 2i6l_A          273 QLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYS  313 (320)
T ss_dssp             HHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTC
T ss_pred             HhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccccccc
Confidence            23346788999999999999999999999999999998643

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=5.3e-48  Score=365.39  Aligned_cols=252  Identities=24%  Similarity=0.427  Sum_probs=209.8

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++....    .....+..|+.+++.+     .|+||+++++++.+.+
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~   87 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-----RHPNILRMYNYFHDRK   87 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-----CCTTBCCEEEEEECSS
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcC-----CCCCEeeEEEEEEcCC
Confidence            467999999999999999999999999999999986432    1235567788888887     6789999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+++||||+ +++|.+++...+  .+++..+..++.||+.||.|||++||+||||||+|||++.                
T Consensus        88 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~----------------  149 (284)
T 2vgo_A           88 RIYLMLEFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGY----------------  149 (284)
T ss_dssp             EEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECT----------------
T ss_pred             EEEEEEEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcC----------------
Confidence            999999999 789999998765  7999999999999999999999999999999999999954                


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCC-CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChH
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPD-QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  329 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~  329 (433)
                                 ++.+||+|||.+...... .....||+.|+|||++.+..++.++||||||+++|+|++|..||...+..
T Consensus       150 -----------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~  218 (284)
T 2vgo_A          150 -----------KGELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT  218 (284)
T ss_dssp             -----------TCCEEECCCTTCEECSSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred             -----------CCCEEEecccccccCcccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh
Confidence                       445667777766543322 23357899999999999999999999999999999999999999877665


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +....+..                       ....                          .+..++.++.+||.+||+.
T Consensus       219 ~~~~~~~~-----------------------~~~~--------------------------~~~~~~~~~~~li~~~l~~  249 (284)
T 2vgo_A          219 ETHRRIVN-----------------------VDLK--------------------------FPPFLSDGSKDLISKLLRY  249 (284)
T ss_dssp             HHHHHHHT-----------------------TCCC--------------------------CCTTSCHHHHHHHHHHSCS
T ss_pred             HHHHHHhc-----------------------cccC--------------------------CCCcCCHHHHHHHHHHhhc
Confidence            54433221                       1111                          1234567899999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCC
Q 013973          410 DPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       410 dP~~R~ta~ell~hp~f~~~~  430 (433)
                      ||.+|||+.|+++||||+...
T Consensus       250 ~p~~Rps~~~ll~h~~~~~~~  270 (284)
T 2vgo_A          250 HPPQRLPLKGVMEHPWVKANS  270 (284)
T ss_dssp             SGGGSCCHHHHHTCHHHHHHC
T ss_pred             CHhhCCCHHHHhhCHHHHhhc
Confidence            999999999999999997543

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=7.1e-48  Score=371.94  Aligned_cols=266  Identities=23%  Similarity=0.297  Sum_probs=195.1

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC-
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN-  171 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~-  171 (433)
                      +.++|++++.||+|+||.||+|+++.+++.||||+++..  ....+.+..|+.+++++     .|+||+++++++.+.. 
T Consensus         4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~~~~   78 (332)
T 3qd2_B            4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-----EHPGIVRYFNAWLETPP   78 (332)
T ss_dssp             HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSC-----CCTTBCCEEEEEEECCS
T ss_pred             hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhC-----CCCCEeeEEEEEEEecc
Confidence            346799999999999999999999999999999998732  33456778899999888     6799999999875432 


Q ss_pred             --------------------------------------------------------eEEEEEecC-CCCHHHHHHhcCC-
Q 013973          172 --------------------------------------------------------HICIVFEKL-GSSLYDFLRKNNY-  193 (433)
Q Consensus       172 --------------------------------------------------------~~~lV~e~~-~~~L~~~l~~~~~-  193 (433)
                                                                              .+++||||+ +++|.+++..... 
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~  158 (332)
T 3qd2_B           79 EKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL  158 (332)
T ss_dssp             CHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSG
T ss_pred             chhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCc
Confidence                                                                    489999999 8999999987542 


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCc
Q 013973          194 RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST  273 (433)
Q Consensus       194 ~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a  273 (433)
                      ...++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++...........        ....    
T Consensus       159 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~--------~~~~----  226 (332)
T 3qd2_B          159 EDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT--------VLTP----  226 (332)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC---------------------
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhcc--------cccc----
Confidence            2356667899999999999999999999999999999996666555555555443322110000        0000    


Q ss_pred             cccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH-hCCCCHHHHHHHhh
Q 013973          274 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV-LGPLPQHMLKRVDR  352 (433)
Q Consensus       274 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~i~~~-~~~~p~~~~~~~~~  352 (433)
                      ..........+||+.|+|||++.+..++.++|||||||++|||++|..|+..     ....+... .+..|..       
T Consensus       227 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~-----~~~~~~~~~~~~~~~~-------  294 (332)
T 3qd2_B          227 MPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME-----RVRIITDVRNLKFPLL-------  294 (332)
T ss_dssp             -----CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH-----HHHHHHHHHTTCCCHH-------
T ss_pred             ccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH-----HHHHHHHhhccCCCcc-------
Confidence            0000011234799999999999999999999999999999999998776521     11111111 0111110       


Q ss_pred             hhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          353 HAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                                                             ....++++.+||.+||+.||++|||+.|+|+||||++
T Consensus       295 ---------------------------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          295 ---------------------------------------FTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN  331 (332)
T ss_dssp             ---------------------------------------HHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred             ---------------------------------------cccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence                                                   1123457789999999999999999999999999986

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=5e-48  Score=369.31  Aligned_cols=260  Identities=23%  Similarity=0.418  Sum_probs=212.6

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh-hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      .+.++|.+.+.||+|+||.||+|.+..+++.||+|+++.... ....+..|+.+++.+     .|+||+++++++.+.+.
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~   80 (304)
T 2jam_A            6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKI-----KHENIVTLEDIYESTTH   80 (304)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHC-----CCTTBCCEEEEEECSSE
T ss_pred             chhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhC-----CCCCeeehhhhcccCCE
Confidence            345789999999999999999999999999999999975432 334567899999888     67899999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +|+||||+ +++|.+++...+  .+++..+..++.||+.||.|||+.||+||||||+|||+..+                
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~----------------  142 (304)
T 2jam_A           81 YYLVMQLVSGGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTP----------------  142 (304)
T ss_dssp             EEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSS----------------
T ss_pred             EEEEEEcCCCccHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecC----------------
Confidence            99999999 889999998764  79999999999999999999999999999999999999321                


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCC-CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                              +.++.+||+|||.+....... ...+||+.|+|||++.+..++.++|||||||++|+|++|..||......+
T Consensus       143 --------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~  214 (304)
T 2jam_A          143 --------EENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK  214 (304)
T ss_dssp             --------STTCCEEBCSCSTTCCCCCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred             --------CCCCCEEEccCCcceecCCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH
Confidence                    234567777777765443322 23479999999999999999999999999999999999999998877655


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+.....                       .++.                      ..++.++.++.+||.+||+.|
T Consensus       215 ~~~~i~~~~~-----------------------~~~~----------------------~~~~~~~~~~~~li~~~l~~d  249 (304)
T 2jam_A          215 LFEKIKEGYY-----------------------EFES----------------------PFWDDISESAKDFICHLLEKD  249 (304)
T ss_dssp             HHHHHHHCCC-----------------------CCCT----------------------TTTTTSCHHHHHHHHHHHCSS
T ss_pred             HHHHHHcCCC-----------------------CCCc----------------------cccccCCHHHHHHHHHHcCCC
Confidence            5444332111                       1110                      112356778999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCC
Q 013973          411 PTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       411 P~~R~ta~ell~hp~f~~~  429 (433)
                      |++|||+.|+|+||||+..
T Consensus       250 p~~Rps~~~~l~h~~~~~~  268 (304)
T 2jam_A          250 PNERYTCEKALSHPWIDGN  268 (304)
T ss_dssp             TTTSCCHHHHHTSHHHHSS
T ss_pred             hhHCcCHHHHhcCccccCC
Confidence            9999999999999999754

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=2.3e-48  Score=377.00  Aligned_cols=247  Identities=27%  Similarity=0.463  Sum_probs=205.6

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh---------hHHHHHHHHHHHHHHHhcCCCCCceEEec
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK---------YREAAMIEIEVLQQLAKHDKGGNRCVQIR  164 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---------~~~~~~~E~~~l~~l~~~~~~~~~i~~~~  164 (433)
                      .+.++|++++.||+|+||.||+|+++.+++.||||+++....         ....+..|+.+++.+     .|+||++++
T Consensus        21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~Iv~~~   95 (335)
T 3dls_A           21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV-----EHANIIKVL   95 (335)
T ss_dssp             HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTC-----CCTTBCCEE
T ss_pred             ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhC-----CCCCEeeEE
Confidence            456789999999999999999999999999999999975321         223456789998888     678999999


Q ss_pred             ceeecCCeEEEEEecC-CC-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCC
Q 013973          165 NWFDYRNHICIVFEKL-GS-SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPD  242 (433)
Q Consensus       165 ~~~~~~~~~~lV~e~~-~~-~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~d  242 (433)
                      +++...+.+++||||+ +| +|.+++....  .+++..+..++.||+.||.|||++|||||||||+|||++         
T Consensus        96 ~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---------  164 (335)
T 3dls_A           96 DIFENQGFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIA---------  164 (335)
T ss_dssp             EEEECSSEEEEEEECCTTSCBHHHHHHTCC--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---------
T ss_pred             EEEeeCCEEEEEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEc---------
Confidence            9999999999999998 44 9999998764  799999999999999999999999999999999999994         


Q ss_pred             CcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCC-CCcchhHHHHHHHHHHHhC
Q 013973          243 YKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTG  319 (433)
Q Consensus       243 fg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg  319 (433)
                                        .++.+||+|||++.......  ...+||+.|+|||++.+..+ +.++|||||||++|+|++|
T Consensus       165 ------------------~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g  226 (335)
T 3dls_A          165 ------------------EDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFE  226 (335)
T ss_dssp             ------------------TTSCEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHS
T ss_pred             ------------------CCCcEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhC
Confidence                              45567777777776544333  34579999999999998876 7899999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHH
Q 013973          320 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL  399 (433)
Q Consensus       320 ~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (433)
                      ..||......                            . ....                          ..+..++.++
T Consensus       227 ~~pf~~~~~~----------------------------~-~~~~--------------------------~~~~~~~~~l  251 (335)
T 3dls_A          227 ENPFCELEET----------------------------V-EAAI--------------------------HPPYLVSKEL  251 (335)
T ss_dssp             SCSCSSGGGG----------------------------T-TTCC--------------------------CCSSCCCHHH
T ss_pred             CCchhhHHHH----------------------------H-hhcc--------------------------CCCcccCHHH
Confidence            9999642110                            0 0000                          0123467789


Q ss_pred             HHHHHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          400 THLLQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       400 ~~li~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      .+||.+||+.||++|||+.|+++||||++.
T Consensus       252 ~~li~~~L~~dP~~Rps~~ell~hp~~~~~  281 (335)
T 3dls_A          252 MSLVSGLLQPVPERRTTLEKLVTDPWVTQP  281 (335)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHCTTTTCC
T ss_pred             HHHHHHHccCChhhCcCHHHHhcCccccCC
Confidence            999999999999999999999999999864

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=1.8e-48  Score=389.05  Aligned_cols=261  Identities=31%  Similarity=0.499  Sum_probs=202.5

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh---------hHHHHHHHHHHHHHHHhcCCCCCceEEec
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK---------YREAAMIEIEVLQQLAKHDKGGNRCVQIR  164 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---------~~~~~~~E~~~l~~l~~~~~~~~~i~~~~  164 (433)
                      .+.++|.+.+.||+|+||.||+|.++.+++.||||++.....         ....+..|+.+++++     .|+||++++
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~l~  206 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL-----NHPCIIKIK  206 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHC-----CCTTBCCCC
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhC-----CCCCEeeEE
Confidence            446789999999999999999999999999999999874321         122467899999998     678999999


Q ss_pred             ceeecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCC
Q 013973          165 NWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY  243 (433)
Q Consensus       165 ~~~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~df  243 (433)
                      +++.. +.+|+||||+ +++|.+++....  .+++..+..++.||+.||+|||++|||||||||+|||++..+       
T Consensus       207 ~~~~~-~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~-------  276 (419)
T 3i6u_A          207 NFFDA-EDYYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE-------  276 (419)
T ss_dssp             EEEES-SEEEEEEECCTTCBGGGGTSSSC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSS-------
T ss_pred             EEEec-CceEEEEEcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCC-------
Confidence            99864 5589999999 899999887654  799999999999999999999999999999999999995432       


Q ss_pred             cCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhC---CCCCCcchhHHHHHHHHHHHh
Q 013973          244 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILG---LGWTYPCDIWSVGCILVELCT  318 (433)
Q Consensus       244 g~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGv~l~ellt  318 (433)
                                       .+..+||+|||++.......  ...+||+.|+|||++.+   ..|+.++|||||||++|+|++
T Consensus       277 -----------------~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~llt  339 (419)
T 3i6u_A          277 -----------------EDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS  339 (419)
T ss_dssp             -----------------SSCCEEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHH
T ss_pred             -----------------CcceEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHH
Confidence                             23468888888887654332  34689999999999864   568899999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhH
Q 013973          319 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  398 (433)
Q Consensus       319 g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (433)
                      |..||........+...                      +..+...+.                      ...+..++.+
T Consensus       340 g~~pf~~~~~~~~~~~~----------------------i~~~~~~~~----------------------~~~~~~~~~~  375 (419)
T 3i6u_A          340 GYPPFSEHRTQVSLKDQ----------------------ITSGKYNFI----------------------PEVWAEVSEK  375 (419)
T ss_dssp             SSCSSCCCSSSCCHHHH----------------------HHTTCCCCC----------------------HHHHTTSCHH
T ss_pred             CCCCCCCCcchHHHHHH----------------------HhcCCCCCC----------------------chhhcccCHH
Confidence            99999764432111110                      111111110                      1123456788


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          399 LTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       399 ~~~li~~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      +.+||.+||+.||++|||++|+|+||||++..
T Consensus       376 ~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~  407 (419)
T 3i6u_A          376 ALDLVKKLLVVDPKARFTTEEALRHPWLQDED  407 (419)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHHSGGGCCHH
T ss_pred             HHHHHHHHccCChhHCcCHHHHhCCcccCChh
Confidence            99999999999999999999999999998754

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.4e-48  Score=379.46  Aligned_cols=262  Identities=24%  Similarity=0.384  Sum_probs=209.4

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc------hhhHHHHHHHHHHHHHHHhcCCCCCceEEeccee
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI------KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  167 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~------~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~  167 (433)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|++...      ....+.+..|+.+++.+     .|+||+++++++
T Consensus        23 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~   97 (345)
T 3hko_A           23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL-----HHPNIARLYEVY   97 (345)
T ss_dssp             HHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHC-----CCTTBCCEEEEE
T ss_pred             hhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhC-----CCCCcceeehhh
Confidence            3457899999999999999999999999999999998643      23346678899999988     579999999999


Q ss_pred             ecCCeEEEEEecC-CCCHHHHHHhcC--------------------------------------CCCCCHHHHHHHHHHH
Q 013973          168 DYRNHICIVFEKL-GSSLYDFLRKNN--------------------------------------YRSFPIDLVREIARQL  208 (433)
Q Consensus       168 ~~~~~~~lV~e~~-~~~L~~~l~~~~--------------------------------------~~~l~~~~~~~i~~qi  208 (433)
                      .+.+.+++||||+ |++|.+++....                                      ...+++..+..++.||
T Consensus        98 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi  177 (345)
T 3hko_A           98 EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQI  177 (345)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHH
T ss_pred             ccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHH
Confidence            9999999999999 999999985210                                      1124677888999999


Q ss_pred             HHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC-------CC
Q 013973          209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-------QN  281 (433)
Q Consensus       209 ~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~  281 (433)
                      +.||+|||++||+||||||+|||++.++                         ...+||+|||++......       ..
T Consensus       178 ~~~l~~LH~~~ivH~Dlkp~NIll~~~~-------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~  232 (345)
T 3hko_A          178 FSALHYLHNQGICHRDIKPENFLFSTNK-------------------------SFEIKLVDFGLSKEFYKLNNGEYYGMT  232 (345)
T ss_dssp             HHHHHHHHHTTEECCCCCGGGEEESCSS-------------------------SCCEEECCCTTCEEGGGTTCC------
T ss_pred             HHHHHHHHHCCccccCCChhhEEEecCC-------------------------CceEEEeeccccccccccCcccccccc
Confidence            9999999999999999999999995432                         236788888877643221       12


Q ss_pred             ceeecCcccchhhhhC--CCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhc
Q 013973          282 YIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVR  359 (433)
Q Consensus       282 ~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~  359 (433)
                      ...||+.|+|||++.+  ..++.++|||||||++|||++|..||.+.+..+....+.......+                
T Consensus       233 ~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~----------------  296 (345)
T 3hko_A          233 TKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFE----------------  296 (345)
T ss_dssp             --CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTT----------------
T ss_pred             ccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccC----------------
Confidence            3579999999999975  6789999999999999999999999998877665544332111100                


Q ss_pred             cCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          360 RGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                             .                      .....+++++.+||.+||+.||.+|||+.|+|+||||++-.
T Consensus       297 -------~----------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~  338 (345)
T 3hko_A          297 -------N----------------------PNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFS  338 (345)
T ss_dssp             -------S----------------------GGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTS
T ss_pred             -------C----------------------cccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccCh
Confidence                   0                      01123567899999999999999999999999999998643

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.1e-47  Score=361.97  Aligned_cols=252  Identities=25%  Similarity=0.434  Sum_probs=184.3

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh----hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK----YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++.....    ....+..|+.+++.+     .|+||+++++++.+.+.
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~   85 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-----KHPSILELYNYFEDSNY   85 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTB-----CCTTBCCEEEEEECSSE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhC-----CCCCeEeEEEEEccCCe
Confidence            579999999999999999999999999999999964321    235567788888777     67899999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      .++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.                 
T Consensus        86 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~-----------------  147 (278)
T 3cok_A           86 VYLVLEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTR-----------------  147 (278)
T ss_dssp             EEEEEECCTTEEHHHHHHTCS-SCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECT-----------------
T ss_pred             EEEEEecCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC-----------------
Confidence            99999999 889999998653 47999999999999999999999999999999999999954                 


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                                ++.+||+|||.+......   .....||+.|+|||++.+..++.++||||||+++|+|++|..||.....
T Consensus       148 ----------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~  217 (278)
T 3cok_A          148 ----------NMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTV  217 (278)
T ss_dssp             ----------TCCEEECCCTTCEECC----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSC
T ss_pred             ----------CCCEEEEeecceeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhH
Confidence                      455677777766543321   1235789999999999998999999999999999999999999986543


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      .+....                       +......                          .+..++.++.+||.+||+
T Consensus       218 ~~~~~~-----------------------~~~~~~~--------------------------~~~~~~~~~~~li~~~l~  248 (278)
T 3cok_A          218 KNTLNK-----------------------VVLADYE--------------------------MPSFLSIEAKDLIHQLLR  248 (278)
T ss_dssp             C----------------------------CCSSCCC--------------------------CCTTSCHHHHHHHHHHSC
T ss_pred             HHHHHH-----------------------HhhcccC--------------------------CccccCHHHHHHHHHHcc
Confidence            222111                       0000011                          123467789999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCCC
Q 013973          409 YDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       409 ~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      .||++|||+.|+++||||++..
T Consensus       249 ~dp~~Rps~~~~l~h~~~~~~~  270 (278)
T 3cok_A          249 RNPADRLSLSSVLDHPFMSRNS  270 (278)
T ss_dssp             SSGGGSCCHHHHTTSTTTC---
T ss_pred             cCHhhCCCHHHHhcCccccCCC
Confidence            9999999999999999998653

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=3.3e-47  Score=362.18  Aligned_cols=258  Identities=29%  Similarity=0.504  Sum_probs=210.8

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----------hhHHHHHHHHHHHHHHHhcCCCCCceEEec
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----------KYREAAMIEIEVLQQLAKHDKGGNRCVQIR  164 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----------~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~  164 (433)
                      +.++|++.+.||+|+||.||+|.++.+++.||||+++...          ...+.+..|+.+++++.    +|+||++++
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~----~h~~i~~~~   90 (298)
T 1phk_A           15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS----GHPNIIQLK   90 (298)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHT----TCTTBCCEE
T ss_pred             hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhc----CCCCEeeee
Confidence            4578999999999999999999999999999999986431          23455678999998883    368899999


Q ss_pred             ceeecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCC
Q 013973          165 NWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY  243 (433)
Q Consensus       165 ~~~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~df  243 (433)
                      +++...+..++||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.         
T Consensus        91 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~---------  159 (298)
T 1phk_A           91 DTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDD---------  159 (298)
T ss_dssp             EEEECSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT---------
T ss_pred             eeeccCCeEEEEEeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcC---------
Confidence            9999999999999999 889999998754  7999999999999999999999999999999999999954         


Q ss_pred             cCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhh------CCCCCCcchhHHHHHHHHH
Q 013973          244 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVIL------GLGWTYPCDIWSVGCILVE  315 (433)
Q Consensus       244 g~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~------~~~~~~~~DvwSlGv~l~e  315 (433)
                                        ++.+||+|||.+.......  ....||+.|+|||++.      ...++.++||||||+++|+
T Consensus       160 ------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~  221 (298)
T 1phk_A          160 ------------------DMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT  221 (298)
T ss_dssp             ------------------TCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHH
T ss_pred             ------------------CCcEEEecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHH
Confidence                              4456777777665443322  2347899999999986      4568899999999999999


Q ss_pred             HHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCc
Q 013973          316 LCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS  395 (433)
Q Consensus       316 lltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (433)
                      |++|..||...+..+....+.....                       ..+.                      ..+..+
T Consensus       222 l~~g~~p~~~~~~~~~~~~~~~~~~-----------------------~~~~----------------------~~~~~~  256 (298)
T 1phk_A          222 LLAGSPPFWHRKQMLMLRMIMSGNY-----------------------QFGS----------------------PEWDDY  256 (298)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHTCC-----------------------CCCT----------------------TTGGGS
T ss_pred             HHHCCCCCcCccHHHHHHHHhcCCc-----------------------ccCc----------------------cccccc
Confidence            9999999988776555443322111                       1110                      011245


Q ss_pred             hhHHHHHHHhccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       396 ~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      +.++.+||.+||+.||++|||+.|+|+||||++..
T Consensus       257 ~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (298)
T 1phk_A          257 SDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV  291 (298)
T ss_dssp             CHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence            67899999999999999999999999999998753

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=2.4e-48  Score=380.43  Aligned_cols=293  Identities=22%  Similarity=0.340  Sum_probs=211.7

Q ss_pred             CceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           92 GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        92 ~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      ++...++|++++.||+|+||.||+|.+..+++.||+|++...  ......+..|+.+++.+     .|+||+++++++..
T Consensus        28 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~  102 (360)
T 3eqc_A           28 GELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-----NSPYIVGFYGAFYS  102 (360)
T ss_dssp             CCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGC-----CCTTBCCEEEEEEE
T ss_pred             cccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHC-----CCCCEEEEeEEEEE
Confidence            344567899999999999999999999999999999999743  33455677888888777     67999999999999


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCceEeeccCccccCCCcCCC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL-CMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                      .+.+|+||||+ +++|.+++....  .+++..+..++.||+.||.|||+. ||+||||||+|||++              
T Consensus       103 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~--------------  166 (360)
T 3eqc_A          103 DGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN--------------  166 (360)
T ss_dssp             TTEEEEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEEC--------------
T ss_pred             CCEEEEEEECCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEEC--------------
Confidence            99999999999 889999998765  799999999999999999999996 999999999999994              


Q ss_pred             CCCCCCcccccCCCCCCEEEEecCCccccC-CCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYER-PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                                   .++.+||+|||++.... .......||+.|+|||++.+..++.++|||||||++|+|++|..||...
T Consensus       167 -------------~~~~~kl~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  233 (360)
T 3eqc_A          167 -------------SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP  233 (360)
T ss_dssp             -------------TTCCEEECCCCCCHHHHHHC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred             -------------CCCCEEEEECCCCcccccccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence                         45567888888775332 1223457999999999999999999999999999999999999999887


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhh-----hcCCchhHHHH
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ-----HVDHSAGDLTH  401 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~  401 (433)
                      +..+....+.......+.............+...+....+.     .....     ........     ....++.++.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  303 (360)
T 3eqc_A          234 DAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPP-----MAIFE-----LLDYIVNEPPPKLPSGVFSLEFQD  303 (360)
T ss_dssp             CHHHHHHHHC------------------------------C-----CCHHH-----HHHHHHHSCCCCCCTTTSCHHHHH
T ss_pred             CHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCc-----ccchh-----hhhHHhccCCCCCCcccccHHHHH
Confidence            76554333222111111111000000000000000000000     00000     00000000     11246788999


Q ss_pred             HHHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          402 LLQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       402 li~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      ||.+||+.||++|||++|+|+||||++
T Consensus       304 li~~~L~~dP~~Rpt~~ell~hp~~~~  330 (360)
T 3eqc_A          304 FVNKCLIKNPAERADLKQLMVHAFIKR  330 (360)
T ss_dssp             HHHHHHCSSTTTSCCHHHHHTSHHHHH
T ss_pred             HHHHHhhcChhhCCCHHHHhhChHhhc
Confidence            999999999999999999999999974

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=2.1e-47  Score=363.07  Aligned_cols=252  Identities=29%  Similarity=0.443  Sum_probs=209.6

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .++|.+.+.||+|+||.||+|.+..+++.||+|++...    ....+.+..|+.+++.+     .|+||+++++++.+.+
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~   88 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-----AHQHVVGFHGFFEDND   88 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEEECSS
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhC-----CCCCEeeeeeeeccCC
Confidence            46799999999999999999999999999999998643    23455667788888877     6789999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      ..++||||+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.                
T Consensus        89 ~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~----------------  150 (294)
T 2rku_A           89 FVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE----------------  150 (294)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT----------------
T ss_pred             EEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcC----------------
Confidence            999999999 899999988754  7999999999999999999999999999999999999954                


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                                 ++.+||+|||.+......   .....||+.|+|||++.+..++.++||||||+++|+|++|..||....
T Consensus       151 -----------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~  219 (294)
T 2rku_A          151 -----------DLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC  219 (294)
T ss_dssp             -----------TCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             -----------CCCEEEEeccCceecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                       445666666666543221   223478999999999999899999999999999999999999998776


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ..+....+..                       +...                          .+...+..+.+||.+||
T Consensus       220 ~~~~~~~~~~-----------------------~~~~--------------------------~~~~~~~~~~~li~~~l  250 (294)
T 2rku_A          220 LKETYLRIKK-----------------------NEYS--------------------------IPKHINPVAASLIQKML  250 (294)
T ss_dssp             HHHHHHHHHT-----------------------TCCC--------------------------CCTTSCHHHHHHHHHHT
T ss_pred             HHHHHHHHhh-----------------------ccCC--------------------------CccccCHHHHHHHHHHc
Confidence            5544332211                       1111                          12345678999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCCCC
Q 013973          408 RYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       408 ~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      +.||++|||+.|+++||||++..
T Consensus       251 ~~~p~~Rps~~~ll~~~~~~~~~  273 (294)
T 2rku_A          251 QTDPTARPTINELLNDEFFTSGY  273 (294)
T ss_dssp             CSSGGGSCCGGGGGGSHHHHTSC
T ss_pred             ccChhhCcCHHHHhhChheecCC
Confidence            99999999999999999998654

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.3e-47  Score=368.02  Aligned_cols=259  Identities=22%  Similarity=0.407  Sum_probs=205.8

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec----
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY----  169 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~----  169 (433)
                      ...++|++++.||+|+||.||+|.+..+++.||||++.........+..|+.+++++.    .|+||+++++++..    
T Consensus        21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~----~h~~i~~~~~~~~~~~~~   96 (326)
T 2x7f_A           21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS----HHRNIATYYGAFIKKNPP   96 (326)
T ss_dssp             CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHC----CSTTBCCEEEEEEECC--
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhcc----CCCCeeeeeeEEeeccCc
Confidence            3457899999999999999999999999999999999765555677888999998883    46889999999876    


Q ss_pred             --CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCC
Q 013973          170 --RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  246 (433)
Q Consensus       170 --~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~  246 (433)
                        .+.+++||||+ +++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.            
T Consensus        97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~------------  164 (326)
T 2x7f_A           97 GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTE------------  164 (326)
T ss_dssp             CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECT------------
T ss_pred             cccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcC------------
Confidence              56899999999 779999998765457999999999999999999999999999999999999954            


Q ss_pred             CCCCCCCcccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhh-----CCCCCCcchhHHHHHHHHHHHh
Q 013973          247 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCT  318 (433)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~ellt  318 (433)
                                     ++.+||+|||++......   .....||+.|+|||++.     +..++.++|||||||++|+|++
T Consensus       165 ---------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~  229 (326)
T 2x7f_A          165 ---------------NAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAE  229 (326)
T ss_dssp             ---------------TCCEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHH
T ss_pred             ---------------CCCEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHh
Confidence                           445666666665543221   23347899999999997     5568999999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhH
Q 013973          319 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  398 (433)
Q Consensus       319 g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (433)
                      |..||...+.......+...  ..+                       .                      .....++..
T Consensus       230 g~~p~~~~~~~~~~~~~~~~--~~~-----------------------~----------------------~~~~~~~~~  262 (326)
T 2x7f_A          230 GAPPLCDMHPMRALFLIPRN--PAP-----------------------R----------------------LKSKKWSKK  262 (326)
T ss_dssp             SSCTTTTSCHHHHHHHHHHS--CCC-----------------------C----------------------CSCSCSCHH
T ss_pred             CCCCCCCCcHHHHHHHhhcC--ccc-----------------------c----------------------CCccccCHH
Confidence            99999876665443322111  000                       0                      001345778


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          399 LTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       399 ~~~li~~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      +.+||.+||+.||.+|||+.|+++||||++..
T Consensus       263 l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~  294 (326)
T 2x7f_A          263 FQSFIESCLVKNHSQRPATEQLMKHPFIRDQP  294 (326)
T ss_dssp             HHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCT
T ss_pred             HHHHHHHHhccChhhCCCHHHHhhChHHhhCc
Confidence            99999999999999999999999999998654

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=1.7e-47  Score=360.20  Aligned_cols=254  Identities=26%  Similarity=0.384  Sum_probs=202.2

Q ss_pred             ceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           93 ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        93 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      ....++|++.+.||+|+||.||+|.+..+++.||+|++....    ...+.+..|+.+++.+     .|+||+++++++.
T Consensus         7 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~   81 (276)
T 2h6d_A            7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF-----RHPHIIKLYQVIS   81 (276)
T ss_dssp             CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-----CCTTBCCEEEEEE
T ss_pred             cceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcC-----CCCCEeEEEEEEe
Confidence            344578999999999999999999999999999999986432    2234567788888877     6789999999999


Q ss_pred             cCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC
Q 013973          169 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       169 ~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                      ..+..++||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+|+||||+|||++.             
T Consensus        82 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~-------------  146 (276)
T 2h6d_A           82 TPTDFFMVMEYVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDA-------------  146 (276)
T ss_dssp             CSSEEEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECT-------------
T ss_pred             cCCeEEEEEeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECC-------------
Confidence            999999999999 889999998764  6999999999999999999999999999999999999954             


Q ss_pred             CCCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCC-CCcchhHHHHHHHHHHHhCCCCCC
Q 013973          248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                                    ++.+||+|||.+.......  ....||+.|+|||++.+..+ +.++||||||+++|+|++|..||.
T Consensus       147 --------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~  212 (276)
T 2h6d_A          147 --------------HMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD  212 (276)
T ss_dssp             --------------TSCEEECCCCGGGCCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             --------------CCCEEEeecccccccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCC
Confidence                          4456777777665443322  23478999999999988765 589999999999999999999998


Q ss_pred             CCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHH
Q 013973          325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  404 (433)
Q Consensus       325 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  404 (433)
                      .....+....+...                       ...                          .+..++.++.+||.
T Consensus       213 ~~~~~~~~~~~~~~-----------------------~~~--------------------------~~~~~~~~l~~li~  243 (276)
T 2h6d_A          213 DEHVPTLFKKIRGG-----------------------VFY--------------------------IPEYLNRSVATLLM  243 (276)
T ss_dssp             CSSHHHHHHHHHHC-----------------------CCC--------------------------CCTTSCHHHHHHHH
T ss_pred             CCcHHHHHHHhhcC-----------------------ccc--------------------------CchhcCHHHHHHHH
Confidence            76655444332211                       111                          12245678999999


Q ss_pred             hccccCCCCCCCHHHHhcCCCCCCC
Q 013973          405 GLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       405 ~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      +||+.||.+|||+.|+++||||++.
T Consensus       244 ~~l~~~p~~Rps~~~~l~h~~~~~~  268 (276)
T 2h6d_A          244 HMLQVDPLKRATIKDIREHEWFKQD  268 (276)
T ss_dssp             HHTCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             HHccCChhhCCCHHHHHhChhhccC
Confidence            9999999999999999999999865

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=4.8e-48  Score=380.06  Aligned_cols=259  Identities=14%  Similarity=0.121  Sum_probs=190.8

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCCceEEecc-------
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN-------  165 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~-------  165 (433)
                      .+|++.+.||+|+||.||+|.+..+++.||||++...    ....+.+..|+.+++.+..   .|||+++++.       
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~---~hp~iv~~~~~~~~p~d  138 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG---ESPEEARDRRRLLLPSD  138 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-------------CBCCCCE
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc---cChhhhhhceeEEeeeh
Confidence            4599999999999999999999999999999999753    3445566778888888865   5678776443       


Q ss_pred             eeecC-----------------CeEEEEEecCCCCHHHHHHhcCCCCCCHHHH------HHHHHHHHHHHHHHHHCCcee
Q 013973          166 WFDYR-----------------NHICIVFEKLGSSLYDFLRKNNYRSFPIDLV------REIARQLLECIAFMHDLCMIH  222 (433)
Q Consensus       166 ~~~~~-----------------~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~------~~i~~qi~~~L~~LH~~~ivH  222 (433)
                      .+...                 ..+||||||+.++|.+++...+ ..+++...      ..++.||+.||+|||++||||
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivH  217 (371)
T 3q60_A          139 AVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQSKGLVH  217 (371)
T ss_dssp             EEEETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred             heecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCcc
Confidence            22221                 4589999999999999998653 23555555      677799999999999999999


Q ss_pred             ccCCCCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhC--CCC
Q 013973          223 TDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG--LGW  300 (433)
Q Consensus       223 rDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~--~~~  300 (433)
                      |||||+|||++                           .++.+||+|||++...........||+.|+|||++.+  ..|
T Consensus       218 rDikp~NIll~---------------------------~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  270 (371)
T 3q60_A          218 GHFTPDNLFIM---------------------------PDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATF  270 (371)
T ss_dssp             TTCSGGGEEEC---------------------------TTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEEC
T ss_pred             CcCCHHHEEEC---------------------------CCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCc
Confidence            99999999994                           4556788888877755443334567899999999987  679


Q ss_pred             CCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhh--hhccCcccCCCCccchhhHhhh
Q 013973          301 TYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEK--YVRRGRLDWPEGAASRESIKSV  378 (433)
Q Consensus       301 ~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  378 (433)
                      +.++|||||||++|||++|..||.+......                    .....  ........              
T Consensus       271 ~~~~DiwSlG~il~elltg~~Pf~~~~~~~~--------------------~~~~~~~~~~~~~~~--------------  316 (371)
T 3q60_A          271 THALNAWQLGLSIYRVWCLFLPFGLVTPGIK--------------------GSWKRPSLRVPGTDS--------------  316 (371)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSTTBCCTTCT--------------------TCCCBCCTTSCCCCS--------------
T ss_pred             CccccHHHHHHHHHHHHhCCCCCCCcCcccc--------------------cchhhhhhhhccccc--------------
Confidence            9999999999999999999999976532100                    00000  00000000              


Q ss_pred             ccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          379 MKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                              ........++.++.+||.+||+.||++|||+.|+|+||||++
T Consensus       317 --------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  358 (371)
T 3q60_A          317 --------LAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQ  358 (371)
T ss_dssp             --------CCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHH
T ss_pred             --------cchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHH
Confidence                    000112466889999999999999999999999999999974

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=6.4e-47  Score=359.06  Aligned_cols=253  Identities=23%  Similarity=0.392  Sum_probs=203.5

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec----
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY----  169 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~----  169 (433)
                      ..|++.+.||+|+||.||+|.+..++..||+|++...   ....+.+..|+.+++.+     .|+||+++++++..    
T Consensus        26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~  100 (290)
T 1t4h_A           26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-----QHPNIVRFYDSWESTVKG  100 (290)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEEEEESSS
T ss_pred             eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhC-----CCCCeeeeeeeeccccCC
Confidence            3489999999999999999999999999999998643   33445667788888877     67899999998765    


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCceEeeccCccccCCCcCC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC--MIHTDLKPENVLLVSSEYIKVPDYKSS  246 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlKp~NILl~~~~~~~i~dfg~~  246 (433)
                      ...+++||||+ +++|.+++....  .+++..+..++.||+.||.|||+.|  |+||||||+|||++             
T Consensus       101 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~-------------  165 (290)
T 1t4h_A          101 KKCIVLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT-------------  165 (290)
T ss_dssp             CEEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES-------------
T ss_pred             CceEEEEEEecCCCCHHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEE-------------
Confidence            46799999999 889999998754  7999999999999999999999999  99999999999994             


Q ss_pred             CCCCCCCcccccCCCCCCEEEEecCCccccCCCC-CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 013973          247 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  325 (433)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~  325 (433)
                                   ..++.+||+|||++....... ....||+.|+|||++.+ .++.++|||||||++|+|++|..||..
T Consensus       166 -------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~  231 (290)
T 1t4h_A          166 -------------GPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSE  231 (290)
T ss_dssp             -------------STTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             -------------CCCCCEEEeeCCCcccccccccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCC
Confidence                         144567888888776544332 23579999999998875 599999999999999999999999987


Q ss_pred             CChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHh
Q 013973          326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  405 (433)
Q Consensus       326 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  405 (433)
                      ...........                      ..+..                        ........++++.+||.+
T Consensus       232 ~~~~~~~~~~~----------------------~~~~~------------------------~~~~~~~~~~~l~~li~~  265 (290)
T 1t4h_A          232 CQNAAQIYRRV----------------------TSGVK------------------------PASFDKVAIPEVKEIIEG  265 (290)
T ss_dssp             CSSHHHHHHHH----------------------TTTCC------------------------CGGGGGCCCHHHHHHHHH
T ss_pred             cCcHHHHHHHH----------------------hccCC------------------------ccccCCCCCHHHHHHHHH
Confidence            55443322110                      00000                        001123456789999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCC
Q 013973          406 LLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       406 ~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      ||+.||.+|||+.|+|+||||+++
T Consensus       266 ~l~~dp~~Rps~~ell~h~~f~~~  289 (290)
T 1t4h_A          266 CIRQNKDERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             HSCSSGGGSCCHHHHHTSGGGC--
T ss_pred             HccCChhhCCCHHHHhhCcccccC
Confidence            999999999999999999999875

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=4.9e-48  Score=370.73  Aligned_cols=256  Identities=23%  Similarity=0.353  Sum_probs=201.5

Q ss_pred             ceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           93 ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        93 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      ..+.++|++.+.||+|+||.||+|.+..+++.||||+++...    .....+..|+.+++.+     .|+||+++++++.
T Consensus         8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~   82 (311)
T 3ork_A            8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-----NHPAIVAVYDTGE   82 (311)
T ss_dssp             SEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCC-----CCTTBCCEEEEEE
T ss_pred             ceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcC-----CCCCcceEEEeee
Confidence            456788999999999999999999999999999999997432    2234456677766665     6799999999887


Q ss_pred             cCC----eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCC
Q 013973          169 YRN----HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY  243 (433)
Q Consensus       169 ~~~----~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~df  243 (433)
                      ...    ..|+||||+ |++|.+++...+  .+++..+..++.||+.||+|||++||+||||||+|||++.++       
T Consensus        83 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~-------  153 (311)
T 3ork_A           83 AETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATN-------  153 (311)
T ss_dssp             EEETTEEEEEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTS-------
T ss_pred             ccCCCCcccEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCC-------
Confidence            644    459999999 899999998765  799999999999999999999999999999999999996555       


Q ss_pred             cCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC------CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHH
Q 013973          244 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD------QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC  317 (433)
Q Consensus       244 g~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ell  317 (433)
                                          .+||+|||++......      ....+||+.|+|||++.+..++.++|||||||++|+|+
T Consensus       154 --------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll  213 (311)
T 3ork_A          154 --------------------AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVL  213 (311)
T ss_dssp             --------------------CEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHH
T ss_pred             --------------------CEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHH
Confidence                                4555555555432221      12346999999999999999999999999999999999


Q ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchh
Q 013973          318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG  397 (433)
Q Consensus       318 tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  397 (433)
                      +|..||.+.+..+....+.... ..+.                                            ......++.
T Consensus       214 ~g~~pf~~~~~~~~~~~~~~~~-~~~~--------------------------------------------~~~~~~~~~  248 (311)
T 3ork_A          214 TGEPPFTGDSPVSVAYQHVRED-PIPP--------------------------------------------SARHEGLSA  248 (311)
T ss_dssp             HSSCSCCCSSHHHHHHHHHHCC-CCCH--------------------------------------------HHHSTTCCH
T ss_pred             hCCCCCCCCChHHHHHHHhcCC-CCCc--------------------------------------------ccccCCCCH
Confidence            9999998877665443322211 1110                                            011235678


Q ss_pred             HHHHHHHhccccCCCCCCCHHHHhcCCCCC
Q 013973          398 DLTHLLQGLLRYDPTDRLTAREALRHPFFT  427 (433)
Q Consensus       398 ~~~~li~~~L~~dP~~R~ta~ell~hp~f~  427 (433)
                      ++.+||.+||+.||++||++.+++.|+|++
T Consensus       249 ~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  278 (311)
T 3ork_A          249 DLDAVVLKALAKNPENRYQTAAEMRADLVR  278 (311)
T ss_dssp             HHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence            899999999999999999999999999985

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=2.5e-47  Score=361.38  Aligned_cols=256  Identities=23%  Similarity=0.409  Sum_probs=188.8

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHH--HHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYRE--AAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~--~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ..++|++++.||+|+||.||+|.+..+++.||+|+++.......  ....|...+  +  ....|+||+++++++...+.
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~--~--~~~~h~~iv~~~~~~~~~~~   80 (290)
T 3fme_A            5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS--M--RTVDCPFTVTFYGALFREGD   80 (290)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHH--H--TTCCCTTBCCEEEEEECSSS
T ss_pred             cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHH--H--HhCCCCeEEEEeeeeeccCC
Confidence            35789999999999999999999999999999999974322222  222222221  1  22378999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          173 ICIVFEKLGSSLYDFLRK--NNYRSFPIDLVREIARQLLECIAFMHDL-CMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       173 ~~lV~e~~~~~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      .++||||++++|.+++..  .....+++..+..++.||+.||.|||++ ||+||||||+|||++.++             
T Consensus        81 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~-------------  147 (290)
T 3fme_A           81 VWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALG-------------  147 (290)
T ss_dssp             EEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTC-------------
T ss_pred             EEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCC-------------
Confidence            999999998899888764  1235799999999999999999999998 999999999999995444             


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhh----hCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALF  323 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~----~~~~~~~~~DvwSlGv~l~elltg~~Pf  323 (433)
                                    .+||+|||.+.......  ....||+.|+|||++    .+..++.++|||||||++|+|++|..||
T Consensus       148 --------------~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~  213 (290)
T 3fme_A          148 --------------QVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPY  213 (290)
T ss_dssp             --------------CEEBCCC---------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSS
T ss_pred             --------------CEEEeecCCcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCc
Confidence                          56666666654333222  224689999999997    4567899999999999999999999999


Q ss_pred             CCCCh-HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          324 QTHEN-LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       324 ~~~~~-~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      ..... .........                      ......+                         ...++.++.+|
T Consensus       214 ~~~~~~~~~~~~~~~----------------------~~~~~~~-------------------------~~~~~~~~~~l  246 (290)
T 3fme_A          214 DSWGTPFQQLKQVVE----------------------EPSPQLP-------------------------ADKFSAEFVDF  246 (290)
T ss_dssp             CCCSCHHHHHHHHHH----------------------SCCCCCC-------------------------TTTSCHHHHHH
T ss_pred             cccCchHHHHHHHhc----------------------cCCCCcc-------------------------cccCCHHHHHH
Confidence            86433 222221111                      0000000                         12457789999


Q ss_pred             HHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          403 LQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       403 i~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      |.+||+.||++|||+.|+++||||+.
T Consensus       247 i~~~l~~~p~~Rpt~~e~l~hp~f~~  272 (290)
T 3fme_A          247 TSQCLKKNSKERPTYPELMQHPFFTL  272 (290)
T ss_dssp             HHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             HHHHhhcChhhCcCHHHHHhCccccc
Confidence            99999999999999999999999974

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=4.4e-47  Score=361.33  Aligned_cols=257  Identities=23%  Similarity=0.351  Sum_probs=203.2

Q ss_pred             cCceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeec----chhhHHHHHHHHHHHHHHHhcCCCCCceEEecce
Q 013973           91 LGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  166 (433)
Q Consensus        91 ~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~  166 (433)
                      .++.+.++|++++.||+|+||.||+|.+..+++.||+|++..    .....+.+..|+.+++.+     .|+||++++++
T Consensus         5 ~g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~hp~iv~~~~~   79 (294)
T 4eqm_A            5 IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL-----SHQNIVSMIDV   79 (294)
T ss_dssp             CSSCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTC-----CBTTBCCEEEE
T ss_pred             hhhHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcC-----CCCCCceEEEe
Confidence            456778899999999999999999999999999999999853    223345667788888777     67899999999


Q ss_pred             eecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcC
Q 013973          167 FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  245 (433)
Q Consensus       167 ~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~  245 (433)
                      +...+.+|+||||+ |++|.+++...+  .+++..+..++.||+.||+|||++||+||||||+|||++.           
T Consensus        80 ~~~~~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~-----------  146 (294)
T 4eqm_A           80 DEEDDCYYLVMEYIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDS-----------  146 (294)
T ss_dssp             EECSSEEEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT-----------
T ss_pred             eeeCCeEEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC-----------
Confidence            99999999999999 889999998765  7999999999999999999999999999999999999954           


Q ss_pred             CCCCCCCCcccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCC
Q 013973          246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA  321 (433)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~  321 (433)
                                      ++.+||+|||++.......    ...+||+.|+|||++.+..++.++||||||+++|+|++|..
T Consensus       147 ----------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~  210 (294)
T 4eqm_A          147 ----------------NKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEP  210 (294)
T ss_dssp             ----------------TSCEEECCCSSSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred             ----------------CCCEEEEeCCCccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCC
Confidence                            4456666666665433221    23479999999999999999999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       322 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      ||.+.+..+......  ....+.                                          ........++..+.+
T Consensus       211 pf~~~~~~~~~~~~~--~~~~~~------------------------------------------~~~~~~~~~~~~l~~  246 (294)
T 4eqm_A          211 PFNGETAVSIAIKHI--QDSVPN------------------------------------------VTTDVRKDIPQSLSN  246 (294)
T ss_dssp             SSCSSCHHHHHHHHH--SSCCCC------------------------------------------HHHHSCTTSCHHHHH
T ss_pred             CCCCCChHHHHHHHh--hccCCC------------------------------------------cchhcccCCCHHHHH
Confidence            998876654332211  111110                                          011223456788999


Q ss_pred             HHHhccccCCCCCCCHHHHhcCCC
Q 013973          402 LLQGLLRYDPTDRLTAREALRHPF  425 (433)
Q Consensus       402 li~~~L~~dP~~R~ta~ell~hp~  425 (433)
                      +|.+||+.||.+||+..+.+.+.|
T Consensus       247 li~~~l~~dp~~R~~~~~~l~~~l  270 (294)
T 4eqm_A          247 VILRATEKDKANRYKTIQEMKDDL  270 (294)
T ss_dssp             HHHHHSCSSGGGSCSSHHHHHHHH
T ss_pred             HHHHHhcCCHhHccccHHHHHHHH
Confidence            999999999999996555555544

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=5.2e-49  Score=387.79  Aligned_cols=248  Identities=18%  Similarity=0.247  Sum_probs=195.0

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeec----chhhHHHHHHHHHHHHHHHhcCCCCCceEEec-------
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR-------  164 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~-------  164 (433)
                      .++|++.+.||+|+||.||+|.+..+++.||||++..    .....+.+..|+.+++.+..  ..|+||++++       
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~--l~hpniv~~~~~~~~~~  149 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG--IKNQKQAKVHLRFIFPF  149 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTT--CCSHHHHHHHHCBCCCS
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccc--cCCHHHHHHHhhhhhhh
Confidence            4679999999999999999999999999999999863    22345667788876665533  2679999888       


Q ss_pred             ceeecCC-----------------eEEEEEecCCCCHHHHHHhcCCCCCCH-------HHHHHHHHHHHHHHHHHHHCCc
Q 013973          165 NWFDYRN-----------------HICIVFEKLGSSLYDFLRKNNYRSFPI-------DLVREIARQLLECIAFMHDLCM  220 (433)
Q Consensus       165 ~~~~~~~-----------------~~~lV~e~~~~~L~~~l~~~~~~~l~~-------~~~~~i~~qi~~~L~~LH~~~i  220 (433)
                      ++++..+                 ..||||||++|+|.+++...+  .+++       ..+..++.||+.||+|||++||
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~--~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i  227 (377)
T 3byv_A          150 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLL--SHSSTHKSLVHHARLQLTLQVIRLLASLHHYGL  227 (377)
T ss_dssp             EEEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHH--HTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             hhhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhcc--ccccccccccHHHHHHHHHHHHHHHHHHHhCCe
Confidence            4444443                 389999999999999998653  3444       7888899999999999999999


Q ss_pred             eeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCC--
Q 013973          221 IHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL--  298 (433)
Q Consensus       221 vHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~--  298 (433)
                      |||||||+|||++                           .++.+||+|||++..........+| +.|+|||++.+.  
T Consensus       228 vHrDikp~NIll~---------------------------~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~  279 (377)
T 3byv_A          228 VHTYLRPVDIVLD---------------------------QRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRAT  279 (377)
T ss_dssp             ECSCCCGGGEEEC---------------------------TTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTS
T ss_pred             ecCCCCHHHEEEc---------------------------CCCCEEEEechhheecCCcccCCCC-cCccChhhhccccc
Confidence            9999999999994                           4456777777777654443344578 999999999987  


Q ss_pred             ---------CCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCc
Q 013973          299 ---------GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGA  369 (433)
Q Consensus       299 ---------~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (433)
                               .|+.++|||||||++|||++|..||.+.+..+...                                    
T Consensus       280 ~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~------------------------------------  323 (377)
T 3byv_A          280 ISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSE------------------------------------  323 (377)
T ss_dssp             THHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSG------------------------------------
T ss_pred             ccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchh------------------------------------
Confidence                     89999999999999999999999997533211000                                    


Q ss_pred             cchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          370 ASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                                       ........++.++.+||.+||+.||++|||+.|+++||||++
T Consensus       324 -----------------~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~  365 (377)
T 3byv_A          324 -----------------WIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  365 (377)
T ss_dssp             -----------------GGGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHH
T ss_pred             -----------------hhhhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHH
Confidence                             000112356788999999999999999999999999999964

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=5.4e-48  Score=371.66  Aligned_cols=281  Identities=20%  Similarity=0.323  Sum_probs=208.0

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC-
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN-  171 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~-  171 (433)
                      ..++|++.+.||+|+||.||+|.+..+++.||||+++...  ...+.+..|+.+++.+     .|+||+++++++.... 
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~   81 (319)
T 4euu_A            7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-----NHKNIVKLFAIEEETTT   81 (319)
T ss_dssp             SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-----CCTTBCCEEEEEECTTT
T ss_pred             CCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhc-----CCCCcceEEEEeecCCC
Confidence            3467999999999999999999999999999999997432  2345667899999988     6789999999887654 


Q ss_pred             -eEEEEEecC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          172 -HICIVFEKL-GSSLYDFLRKNNY-RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       172 -~~~lV~e~~-~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                       ..|+||||+ +++|.+++..... ..+++..+..++.||+.||+|||++|||||||||+|||+....            
T Consensus        82 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~------------  149 (319)
T 4euu_A           82 RHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGE------------  149 (319)
T ss_dssp             CCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECT------------
T ss_pred             ceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccC------------
Confidence             889999999 8999999986532 2399999999999999999999999999999999999983221            


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhh--------CCCCCCcchhHHHHHHHHHHHh
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVIL--------GLGWTYPCDIWSVGCILVELCT  318 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~--------~~~~~~~~DvwSlGv~l~ellt  318 (433)
                                 +..+.+||+|||++.......  ....||+.|+|||++.        +..++.++|||||||++|||++
T Consensus       150 -----------~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~  218 (319)
T 4euu_A          150 -----------DGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAAT  218 (319)
T ss_dssp             -----------TSCEEEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHH
T ss_pred             -----------CCCceEEEccCCCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHh
Confidence                       334567888888886544333  2357999999999997        5678999999999999999999


Q ss_pred             CCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchh
Q 013973          319 GEALFQTHENL-EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG  397 (433)
Q Consensus       319 g~~Pf~~~~~~-~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  397 (433)
                      |..||...... .....+...+...|...+..+.     ....+.+.|........                .....++.
T Consensus       219 g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~----------------~~~~~~~~  277 (319)
T 4euu_A          219 GSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQ-----KAENGPIDWSGDMPVSC----------------SLSRGLQV  277 (319)
T ss_dssp             SSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEE-----CSTTCCEEEESSCCTTC----------------SSCHHHHH
T ss_pred             CCCCCCCCCccchhHHHHHHHhcCCCcccchhhh-----cccCCccccCccCCccc----------------ccchhHHH
Confidence            99999753321 1122222222222211100000     00111222221111000                11224566


Q ss_pred             HHHHHHHhccccCCCCCCCHHHHhcCC
Q 013973          398 DLTHLLQGLLRYDPTDRLTAREALRHP  424 (433)
Q Consensus       398 ~~~~li~~~L~~dP~~R~ta~ell~hp  424 (433)
                      .+.+||.+||+.||++|||++|+|+||
T Consensus       278 ~l~~ll~~~L~~dP~~R~s~~ell~h~  304 (319)
T 4euu_A          278 LLTPVLANILEADQEKCWGFDQFFAET  304 (319)
T ss_dssp             HHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred             HhHHHHHHhccCChhhhccHHHhhhcc
Confidence            889999999999999999999999997

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=2.7e-47  Score=367.29  Aligned_cols=260  Identities=31%  Similarity=0.508  Sum_probs=206.0

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---------hhHHHHHHHHHHHHHHHhcCCCCCceEEec
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---------KYREAAMIEIEVLQQLAKHDKGGNRCVQIR  164 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---------~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~  164 (433)
                      .+.++|++.+.||+|+||.||+|.+..+++.||||++....         .....+..|+.+++.+     .|+||++++
T Consensus         7 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~   81 (322)
T 2ycf_A            7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL-----NHPCIIKIK   81 (322)
T ss_dssp             HHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHC-----CCTTBCCEE
T ss_pred             hhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhC-----CCCCCceEe
Confidence            45578999999999999999999999999999999986432         1223467899999988     678999999


Q ss_pred             ceeecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCC
Q 013973          165 NWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY  243 (433)
Q Consensus       165 ~~~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~df  243 (433)
                      +++.... +|+||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++       
T Consensus        82 ~~~~~~~-~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~-------  151 (322)
T 2ycf_A           82 NFFDAED-YYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE-------  151 (322)
T ss_dssp             EEEESSS-EEEEEECCTTEETHHHHSTTC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSS-------
T ss_pred             eEEcCCc-eEEEEecCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCC-------
Confidence            9987665 89999999 889999997653  799999999999999999999999999999999999995432       


Q ss_pred             cCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhh---CCCCCCcchhHHHHHHHHHHHh
Q 013973          244 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCT  318 (433)
Q Consensus       244 g~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~ellt  318 (433)
                                       .+..+||+|||++.......  ....||+.|+|||++.   ...++.++|||||||++|+|++
T Consensus       152 -----------------~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~  214 (322)
T 2ycf_A          152 -----------------EDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS  214 (322)
T ss_dssp             -----------------SSCCEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHH
T ss_pred             -----------------CCCeEEEccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHh
Confidence                             23458999999887654332  2347899999999985   4568999999999999999999


Q ss_pred             CCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchh
Q 013973          319 GEALFQTHENLE-HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG  397 (433)
Q Consensus       319 g~~Pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  397 (433)
                      |..||....... ....+..                       +....                      ....+..++.
T Consensus       215 g~~pf~~~~~~~~~~~~~~~-----------------------~~~~~----------------------~~~~~~~~~~  249 (322)
T 2ycf_A          215 GYPPFSEHRTQVSLKDQITS-----------------------GKYNF----------------------IPEVWAEVSE  249 (322)
T ss_dssp             SSCSSCSTTCSSCHHHHHHH-----------------------TCCCC----------------------CHHHHTTSCH
T ss_pred             CCCCCcccchHHHHHHHHHh-----------------------Ccccc----------------------CchhhhhcCH
Confidence            999997644321 1111111                       10000                      0111235677


Q ss_pred             HHHHHHHhccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          398 DLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       398 ~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      ++.+||.+||+.||++|||+.|+|+||||++..
T Consensus       250 ~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~~  282 (322)
T 2ycf_A          250 KALDLVKKLLVVDPKARFTTEEALRHPWLQDED  282 (322)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCHH
T ss_pred             HHHHHHHHHcccCHhhCCCHHHHhhCcCcCCHH
Confidence            899999999999999999999999999998643

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=2.8e-47  Score=358.51  Aligned_cols=255  Identities=24%  Similarity=0.381  Sum_probs=204.9

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      .++|++.+.||+|+||.||+|.++.+++.||+|++....  ...+.+..|+.+++.+     .|+||+++++++.+.+..
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~   80 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-----NHENVVKFYGHRREGNIQ   80 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTC-----CCTTBCCEEEEEEETTEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhc-----CCCCceeeeeEEEcCCEE
Confidence            467999999999999999999999999999999986432  3446677888888877     678999999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      |+||||+ +++|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||++.                  
T Consensus        81 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~------------------  140 (276)
T 2yex_A           81 YLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE------------------  140 (276)
T ss_dssp             EEEEECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT------------------
T ss_pred             EEEEEecCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEcc------------------
Confidence            9999999 78999998654  37999999999999999999999999999999999999954                  


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhCCCC-CCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                               ++.+||+|||.+......     .....||+.|+|||++.+..+ +.++||||||+++|+|++|..||...
T Consensus       141 ---------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  211 (276)
T 2yex_A          141 ---------RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP  211 (276)
T ss_dssp             ---------TCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCS
T ss_pred             ---------CCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCC
Confidence                     445666666666433211     123478999999999988765 68899999999999999999999865


Q ss_pred             ChHHH-HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHh
Q 013973          327 ENLEH-LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  405 (433)
Q Consensus       327 ~~~~~-~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  405 (433)
                      ..... ...+..                      . ....                        ..+...+.++.+||.+
T Consensus       212 ~~~~~~~~~~~~----------------------~-~~~~------------------------~~~~~~~~~~~~li~~  244 (276)
T 2yex_A          212 SDSCQEYSDWKE----------------------K-KTYL------------------------NPWKKIDSAPLALLHK  244 (276)
T ss_dssp             CTTSHHHHHHHT----------------------T-CTTS------------------------TTGGGSCHHHHHHHHH
T ss_pred             chHHHHHHHhhh----------------------c-cccc------------------------CchhhcCHHHHHHHHH
Confidence            43211 111000                      0 0000                        0112456789999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCCCCCCC
Q 013973          406 LLRYDPTDRLTAREALRHPFFTRDHL  431 (433)
Q Consensus       406 ~L~~dP~~R~ta~ell~hp~f~~~~~  431 (433)
                      ||+.||++|||+.|+++||||++...
T Consensus       245 ~l~~~p~~Rps~~~il~~~~~~~~~~  270 (276)
T 2yex_A          245 ILVENPSARITIPDIKKDRWYNKPLK  270 (276)
T ss_dssp             HSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred             HCCCCchhCCCHHHHhcCccccChhh
Confidence            99999999999999999999987654

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.8e-47  Score=372.38  Aligned_cols=256  Identities=24%  Similarity=0.406  Sum_probs=201.2

Q ss_pred             cCcEEEEeeeeccccEEEEEEEEC---CCCeEEEEEEeecch-----hhHHHHHHHHHHHHHHHhcCCCCCceEEeccee
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDR---ERKEMVAIKIVRGIK-----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  167 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~---~~~~~vAiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~  167 (433)
                      .++|++++.||+|+||.||+|++.   .+++.||||+++...     ...+.+..|+.+++.+.    +|++|+.+++++
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~----~h~~iv~~~~~~  128 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR----QSPFLVTLHYAF  128 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHH----TCTTBCCEEEEE
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHcc----CCCceeEEEEEE
Confidence            368999999999999999999984   588999999986321     23345667899999885    357899999999


Q ss_pred             ecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCC
Q 013973          168 DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  246 (433)
Q Consensus       168 ~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~  246 (433)
                      ...+.+++||||+ +++|.+++....  .+++..+..++.||+.||.|||++|||||||||+|||++.            
T Consensus       129 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~------------  194 (355)
T 1vzo_A          129 QTETKLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDS------------  194 (355)
T ss_dssp             EETTEEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT------------
T ss_pred             eeCceEEEEeecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC------------
Confidence            9999999999999 889999998764  7999999999999999999999999999999999999954            


Q ss_pred             CCCCCCCcccccCCCCCCEEEEecCCccccCCC----CCceeecCcccchhhhhC--CCCCCcchhHHHHHHHHHHHhCC
Q 013973          247 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELCTGE  320 (433)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~elltg~  320 (433)
                                     ++.+||+|||++......    ....+||+.|+|||++.+  ..++.++|||||||++|||++|.
T Consensus       195 ---------------~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~  259 (355)
T 1vzo_A          195 ---------------NGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA  259 (355)
T ss_dssp             ---------------TSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSS
T ss_pred             ---------------CCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCC
Confidence                           445666666666533221    123579999999999986  34789999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHH
Q 013973          321 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  400 (433)
Q Consensus       321 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (433)
                      .||...........+...                   +....                          ...+..++..+.
T Consensus       260 ~pf~~~~~~~~~~~~~~~-------------------~~~~~--------------------------~~~~~~~~~~~~  294 (355)
T 1vzo_A          260 SPFTVDGEKNSQAEISRR-------------------ILKSE--------------------------PPYPQEMSALAK  294 (355)
T ss_dssp             CTTSCTTSCCCHHHHHHH-------------------HHHCC--------------------------CCCCTTSCHHHH
T ss_pred             CCCccCCccchHHHHHHH-------------------HhccC--------------------------CCCCcccCHHHH
Confidence            999754321111111000                   00000                          012235677899


Q ss_pred             HHHHhccccCCCCCC-----CHHHHhcCCCCCCC
Q 013973          401 HLLQGLLRYDPTDRL-----TAREALRHPFFTRD  429 (433)
Q Consensus       401 ~li~~~L~~dP~~R~-----ta~ell~hp~f~~~  429 (433)
                      +||.+||+.||.+||     ++.|+++||||+..
T Consensus       295 ~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~  328 (355)
T 1vzo_A          295 DLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI  328 (355)
T ss_dssp             HHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             HHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence            999999999999999     99999999999864

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=1.8e-47  Score=370.88  Aligned_cols=263  Identities=29%  Similarity=0.490  Sum_probs=183.0

Q ss_pred             eecCcEEEEe-eeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec---
Q 013973           94 NLTSRYKIHS-KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY---  169 (433)
Q Consensus        94 ~~~~~~~~~~-~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~---  169 (433)
                      .+.++|++++ .||+|+||.||+|.++.+++.||||++......    ..|+..+.+.    ..|+||+++++++..   
T Consensus        25 ~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~e~~~~~~~----~~h~~i~~~~~~~~~~~~   96 (336)
T 3fhr_A           25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKA----RQEVDHHWQA----SGGPHIVCILDVYENMHH   96 (336)
T ss_dssp             CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHH----HHHHHHHHHH----TTSTTBCCEEEEEEEEET
T ss_pred             cccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHH----HHHHHHHHHh----cCCCChHHHHHHHhhccC
Confidence            4567899965 699999999999999999999999999754332    2233333222    166889999998876   


Q ss_pred             -CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC
Q 013973          170 -RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       170 -~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                       ...+++||||+ |++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.+            
T Consensus        97 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~------------  164 (336)
T 3fhr_A           97 GKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSK------------  164 (336)
T ss_dssp             TEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCS------------
T ss_pred             CCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEec------------
Confidence             56699999999 8899999998766679999999999999999999999999999999999999543            


Q ss_pred             CCCCCCcccccCCCCCCEEEEecCCccccCCCC-CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                                  +.++.+||+|||++....... ...+||+.|+|||++.+..++.++|||||||++|+|++|..||...
T Consensus       165 ------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  232 (336)
T 3fhr_A          165 ------------EKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSN  232 (336)
T ss_dssp             ------------STTCCEEECCCTTCEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---
T ss_pred             ------------CCCceEEEeccccceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence                        234568999999887544332 3457899999999998888999999999999999999999999765


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      ........+..                   .+..+....+.                      ..+..++.++.+||.+|
T Consensus       233 ~~~~~~~~~~~-------------------~~~~~~~~~~~----------------------~~~~~~~~~~~~li~~~  271 (336)
T 3fhr_A          233 TGQAISPGMKR-------------------RIRLGQYGFPN----------------------PEWSEVSEDAKQLIRLL  271 (336)
T ss_dssp             -------------------------------------CCCT----------------------TTSTTCCHHHHHHHHHH
T ss_pred             cchhhhhhHHH-------------------hhhccccccCc----------------------hhhccCCHHHHHHHHHH
Confidence            43322111000                   01111111111                      11235678899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      |+.||.+|||+.|+|+||||++.
T Consensus       272 L~~dP~~Rpt~~ell~hp~~~~~  294 (336)
T 3fhr_A          272 LKTDPTERLTITQFMNHPWINQS  294 (336)
T ss_dssp             SCSSGGGSCCHHHHHHSHHHHTG
T ss_pred             CCCChhHCcCHHHHhcCcccccc
Confidence            99999999999999999999753

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=4.7e-47  Score=362.36  Aligned_cols=255  Identities=25%  Similarity=0.466  Sum_probs=203.6

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-----hhHHHHHHHHHHHHHHHhcCCCCCceEEeccee--
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF--  167 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~--  167 (433)
                      +.++|++.+.||+|+||.||+|.+..+++.||+|+++...     .....+..|+.+++.+     .|+||+++++++  
T Consensus         3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~   77 (305)
T 2wtk_C            3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-----RHKNVIQLVDVLYN   77 (305)
T ss_dssp             --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTC-----CCTTBCCEEEEEEC
T ss_pred             cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhc-----CCCCeeEEEEEEEc
Confidence            4578999999999999999999999999999999997432     2345677888888877     678999999988  


Q ss_pred             ecCCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC
Q 013973          168 DYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       168 ~~~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                      .....+|+||||+.++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.+            
T Consensus        78 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~------------  145 (305)
T 2wtk_C           78 EEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTG------------  145 (305)
T ss_dssp             C---CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT------------
T ss_pred             CCCCeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCC------------
Confidence            55678999999996669898887666689999999999999999999999999999999999999544            


Q ss_pred             CCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCC--CCCcchhHHHHHHHHHHHhCC
Q 013973          248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLG--WTYPCDIWSVGCILVELCTGE  320 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGv~l~elltg~  320 (433)
                                     +.+||+|||.+.......     ....||+.|+|||++.+..  ++.++||||||+++|+|++|.
T Consensus       146 ---------------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~  210 (305)
T 2wtk_C          146 ---------------GTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGL  210 (305)
T ss_dssp             ---------------CCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSS
T ss_pred             ---------------CcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCC
Confidence                           456666666655432211     2346899999999998754  378999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHH
Q 013973          321 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  400 (433)
Q Consensus       321 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (433)
                      .||.+.+..+....+..                       +...                          .+..++.++.
T Consensus       211 ~p~~~~~~~~~~~~i~~-----------------------~~~~--------------------------~~~~~~~~l~  241 (305)
T 2wtk_C          211 YPFEGDNIYKLFENIGK-----------------------GSYA--------------------------IPGDCGPPLS  241 (305)
T ss_dssp             CSCCCSSHHHHHHHHHH-----------------------CCCC--------------------------CCSSSCHHHH
T ss_pred             CCCCCchHHHHHHHHhc-----------------------CCCC--------------------------CCCccCHHHH
Confidence            99988765554433221                       1111                          1234567899


Q ss_pred             HHHHhccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          401 HLLQGLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       401 ~li~~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      +||.+||+.||.+|||+.|+++||||++..
T Consensus       242 ~li~~~l~~dp~~Rps~~~ll~~~~~~~~~  271 (305)
T 2wtk_C          242 DLLKGMLEYEPAKRFSIRQIRQHSWFRKKH  271 (305)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHSHHHHSCC
T ss_pred             HHHHHHccCChhhCCCHHHHhcCcccccCC
Confidence            999999999999999999999999997653

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=1.3e-46  Score=358.82  Aligned_cols=258  Identities=24%  Similarity=0.421  Sum_probs=205.8

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ...++|++++.||+|+||.||+|.+..+++.||+|++... ......+..|+.+++.+     .|+||+++++++...+.
T Consensus        16 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~   90 (302)
T 2j7t_A           16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATC-----DHPYIVKLLGAYYHDGK   90 (302)
T ss_dssp             CGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHC-----CCTTBCCEEEEEECC-C
T ss_pred             CCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcC-----CCCCEeeeeeeeeeCCe
Confidence            4567899999999999999999999999999999998643 23446677899999887     67899999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++                  
T Consensus        91 ~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~------------------  151 (302)
T 2j7t_A           91 LWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMT------------------  151 (302)
T ss_dssp             EEEEEECCTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEC------------------
T ss_pred             EEEEEEeCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEC------------------
Confidence            99999999 889999987643 4699999999999999999999999999999999999994                  


Q ss_pred             CCcccccCCCCCCEEEEecCCccccC---CCCCceeecCcccchhhhh-----CCCCCCcchhHHHHHHHHHHHhCCCCC
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYER---PDQNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGEALF  323 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~Pf  323 (433)
                               .++.+||+|||++....   .......||+.|+|||++.     +..++.++||||||+++|+|++|..||
T Consensus       152 ---------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~  222 (302)
T 2j7t_A          152 ---------LEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPH  222 (302)
T ss_dssp             ---------TTSCEEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ---------CCCCEEEEECCCCccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCC
Confidence                     44567777777653211   1123347899999999984     567899999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      ...+..+....+.....+.                      .                        ..+..++.++.+||
T Consensus       223 ~~~~~~~~~~~~~~~~~~~----------------------~------------------------~~~~~~~~~l~~li  256 (302)
T 2j7t_A          223 HELNPMRVLLKIAKSDPPT----------------------L------------------------LTPSKWSVEFRDFL  256 (302)
T ss_dssp             TTSCHHHHHHHHHHSCCCC----------------------C------------------------SSGGGSCHHHHHHH
T ss_pred             ccCCHHHHHHHHhccCCcc----------------------c------------------------CCccccCHHHHHHH
Confidence            8876655443322110000                      0                        01124567899999


Q ss_pred             HhccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          404 QGLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      .+||+.||++|||+.|+++||||++..
T Consensus       257 ~~~l~~dp~~Rps~~~ll~h~~~~~~~  283 (302)
T 2j7t_A          257 KIALDKNPETRPSAAQLLEHPFVSSIT  283 (302)
T ss_dssp             HHHSCSCTTTSCCHHHHTTSTTTTTCC
T ss_pred             HHHcccChhhCCCHHHHhcChHHhhhc
Confidence            999999999999999999999998754

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=1.3e-46  Score=360.97  Aligned_cols=256  Identities=26%  Similarity=0.439  Sum_probs=204.0

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ..++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+..|+.+++.+     .|+||+++++++...+.+|
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~  100 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQC-----DSPHVVKYYGSYFKNTDLW  100 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTC-----CCTTBCCEEEEEEETTEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhC-----CCCCCccEEEEEEeCCEEE
Confidence            4567999999999999999999999999999999997533 345677899998887     6789999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +||||+ +++|.+++.... ..+++..+..++.||+.||.|||+.||+|+||||+|||++.                   
T Consensus       101 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~-------------------  160 (314)
T 3com_A          101 IVMEYCGAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNT-------------------  160 (314)
T ss_dssp             EEEECCTTEEHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT-------------------
T ss_pred             EEeecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECC-------------------
Confidence            999999 779999997433 47999999999999999999999999999999999999954                   


Q ss_pred             cccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                              ++.+||+|||.+......   .....||+.|+|||++.+..++.++||||||+++|+|++|..||.......
T Consensus       161 --------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~  232 (314)
T 3com_A          161 --------EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR  232 (314)
T ss_dssp             --------TCCEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred             --------CCCEEEeecccchhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH
Confidence                    445667777766543322   123478999999999999999999999999999999999999998766554


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+.....+                      .+                        ..+..++.++.+||.+||+.|
T Consensus       233 ~~~~~~~~~~~----------------------~~------------------------~~~~~~~~~l~~li~~~l~~d  266 (314)
T 3com_A          233 AIFMIPTNPPP----------------------TF------------------------RKPELWSDNFTDFVKQCLVKS  266 (314)
T ss_dssp             HHHHHHHSCCC----------------------CC------------------------SSGGGSCHHHHHHHHHHTCSC
T ss_pred             HHHHHhcCCCc----------------------cc------------------------CCcccCCHHHHHHHHHHccCC
Confidence            33322111000                      00                        001234678999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCCC
Q 013973          411 PTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       411 P~~R~ta~ell~hp~f~~~~  430 (433)
                      |.+|||+.|+++||||+...
T Consensus       267 p~~Rpt~~~ll~~~~~~~~~  286 (314)
T 3com_A          267 PEQRATATQLLQHPFVRSAK  286 (314)
T ss_dssp             TTTSCCHHHHTTSHHHHTCC
T ss_pred             hhhCcCHHHHHhCHHHhcCC
Confidence            99999999999999998653

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=7.3e-46  Score=352.73  Aligned_cols=259  Identities=19%  Similarity=0.240  Sum_probs=206.3

Q ss_pred             CceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           92 GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        92 ~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      +..+.++|++.+.||+|+||.||+|.+..+++.||+|++... .....+..|+.+++.+.+    |++++.+++++....
T Consensus         5 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~e~~~~~~l~~----~~~i~~~~~~~~~~~   79 (298)
T 1csn_A            5 NNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR-SDAPQLRDEYRTYKLLAG----CTGIPNVYYFGQEGL   79 (298)
T ss_dssp             -CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC-TTSCCHHHHHHHHHHTTT----CTTCCCEEEEEEETT
T ss_pred             CcccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccC-CccHHHHHHHHHHHHHhc----CCCCCeEEeecCCCc
Confidence            345678899999999999999999999999999999998643 233456778998888843    466888888999999


Q ss_pred             eEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          172 HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       172 ~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      ..++||||++++|.+++...+ ..+++..+..++.||+.||+|||++||+||||||+|||++.++.              
T Consensus        80 ~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~--------------  144 (298)
T 1csn_A           80 HNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNS--------------  144 (298)
T ss_dssp             EEEEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSS--------------
T ss_pred             eeEEEEEecCCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCC--------------
Confidence            999999999999999998754 46999999999999999999999999999999999999976543              


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCC----------CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCC
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPD----------QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA  321 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~  321 (433)
                              .....+||+|||++......          .....||+.|+|||++.+..++.++|||||||++|||++|..
T Consensus       145 --------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~  216 (298)
T 1csn_A          145 --------KNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSL  216 (298)
T ss_dssp             --------TTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             --------CCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCC
Confidence                    23345778888877644322          133579999999999999999999999999999999999999


Q ss_pred             CCCCCC---hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhH
Q 013973          322 LFQTHE---NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  398 (433)
Q Consensus       322 Pf~~~~---~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (433)
                      ||.+.+   ..+.+..+.......                                            ........++.+
T Consensus       217 pf~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~  252 (298)
T 1csn_A          217 PWQGLKAATNKQKYERIGEKKQST--------------------------------------------PLRELCAGFPEE  252 (298)
T ss_dssp             TTSSCCSCCHHHHHHHHHHHHHHS--------------------------------------------CHHHHTTTSCHH
T ss_pred             CcchhhccccHHHHHHHHhhccCc--------------------------------------------cHHHHHhhCcHH
Confidence            998743   222222221111000                                            011122356789


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhc
Q 013973          399 LTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       399 ~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                      +.+||.+||+.||++|||+.++++
T Consensus       253 l~~li~~~l~~dp~~RP~~~~l~~  276 (298)
T 1csn_A          253 FYKYMHYARNLAFDATPDYDYLQG  276 (298)
T ss_dssp             HHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHHHHHHhcCCcccCCCHHHHHH
Confidence            999999999999999999998875

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=4e-46  Score=360.38  Aligned_cols=255  Identities=21%  Similarity=0.266  Sum_probs=202.5

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      +.++|++.+.||+|+||.||+|.+..+++.||||++.... ....+..|+.+++.+.    +|++|+.+++++...+..+
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~----~h~~i~~~~~~~~~~~~~~   81 (330)
T 2izr_A            7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLG----SGDGIPQVYYFGPCGKYNA   81 (330)
T ss_dssp             ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHC----SCTTSCCEEEEEEETTEEE
T ss_pred             EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhh----CCCCCCEEEEEEecCCccE
Confidence            4578999999999999999999999999999999987432 2345778999999984    4578999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          175 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       175 lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      +||||++++|.+++.... ..+++..+..++.||+.||+|||+.|||||||||+|||++.++.                 
T Consensus        82 lv~e~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~-----------------  143 (330)
T 2izr_A           82 MVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGN-----------------  143 (330)
T ss_dssp             EEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGG-----------------
T ss_pred             EEEEeCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCC-----------------
Confidence            999999999999998753 47999999999999999999999999999999999999976553                 


Q ss_pred             ccccCCCCCCEEEEecCCccccCCC----------CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPD----------QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                           .....+||+|||++......          ....+||+.|+|||++.+..++.++|||||||++|||++|..||.
T Consensus       144 -----~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~  218 (330)
T 2izr_A          144 -----KTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ  218 (330)
T ss_dssp             -----TCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             -----CCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcc
Confidence                 11223677777766543221          134579999999999999999999999999999999999999998


Q ss_pred             CCChH---HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          325 THENL---EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       325 ~~~~~---~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      +.+..   +.+..+.....+.+.                                            ......++ ++.+
T Consensus       219 ~~~~~~~~~~~~~i~~~~~~~~~--------------------------------------------~~~~~~~p-~~~~  253 (330)
T 2izr_A          219 GLKADTLKERYQKIGDTKRATPI--------------------------------------------EVLCENFP-EMAT  253 (330)
T ss_dssp             TCCCSSHHHHHHHHHHHHHHSCH--------------------------------------------HHHTTTCH-HHHH
T ss_pred             ccccccHHHHHHHHHhhhccCCH--------------------------------------------HHHhccCh-HHHH
Confidence            74332   222222111111110                                            01112345 8999


Q ss_pred             HHHhccccCCCCCCCHHHHhc
Q 013973          402 LLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       402 li~~~L~~dP~~R~ta~ell~  422 (433)
                      ||..||+.||.+||++.++++
T Consensus       254 li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          254 YLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHHHHhCCCCCCCCHHHHHH
Confidence            999999999999999998876

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=3.2e-46  Score=366.88  Aligned_cols=249  Identities=19%  Similarity=0.320  Sum_probs=199.8

Q ss_pred             cCcEEEEeeeeccccEEEEEEEEC-------CCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecce
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDR-------ERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  166 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~-------~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~  166 (433)
                      .++|++.+.||+|+||.||+|.+.       .++..||||+++..  ....+.+..|+.+++.+.    .|+||++++++
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----~hpnIv~~~~~  155 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG----KHKNIINLLGA  155 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSC----CCTTBCCEEEE
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhc----CCCCEeeEEEE
Confidence            478999999999999999999874       35568999999743  234456788999998873    46889999999


Q ss_pred             eecCCeEEEEEecC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceE
Q 013973          167 FDYRNHICIVFEKL-GSSLYDFLRKNNY--------------RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVL  231 (433)
Q Consensus       167 ~~~~~~~~lV~e~~-~~~L~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NIL  231 (433)
                      +...+.+|+||||+ +|+|.+++.....              ..+++..+..++.||+.||+|||++|||||||||+|||
T Consensus       156 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIl  235 (370)
T 2psq_A          156 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL  235 (370)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEE
T ss_pred             EccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEE
Confidence            99999999999999 8899999987531              35899999999999999999999999999999999999


Q ss_pred             eeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchh
Q 013973          232 LVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDI  306 (433)
Q Consensus       232 l~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Dv  306 (433)
                      ++.+                           +.+||+|||++.......     ....||+.|+|||++.+..|+.++||
T Consensus       236 l~~~---------------------------~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv  288 (370)
T 2psq_A          236 VTEN---------------------------NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV  288 (370)
T ss_dssp             ECTT---------------------------CCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHH
T ss_pred             ECCC---------------------------CCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHH
Confidence            9544                           456666666665332211     22357889999999999999999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHH
Q 013973          307 WSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ  385 (433)
Q Consensus       307 wSlGv~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (433)
                      |||||++|||++ |..||.+....+....+..                       +..                      
T Consensus       289 wslG~il~ellt~g~~p~~~~~~~~~~~~~~~-----------------------~~~----------------------  323 (370)
T 2psq_A          289 WSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE-----------------------GHR----------------------  323 (370)
T ss_dssp             HHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT-----------------------TCC----------------------
T ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhc-----------------------CCC----------------------
Confidence            999999999999 9999987665443332211                       100                      


Q ss_pred             HHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          386 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       386 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                         ...+..++.++.+||.+||+.||.+|||+.|++++
T Consensus       324 ---~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          324 ---MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             ---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence               01123567789999999999999999999999864

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=6.7e-46  Score=355.72  Aligned_cols=246  Identities=22%  Similarity=0.289  Sum_probs=195.1

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      .++|++.+.||+|+||+||+|.+  +++.||+|++...   ....+.+..|+.+++++     .|+||+++++++...+.
T Consensus        36 ~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~~  108 (309)
T 3p86_A           36 WCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRL-----RHPNIVLFMGAVTQPPN  108 (309)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEECSTTC
T ss_pred             hhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEEECCc
Confidence            46899999999999999999976  5788999998643   23345677899999998     67899999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNY-RSFPIDLVREIARQLLECIAFMHDLC--MIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      +++||||+ +++|.+++..... ..+++..+..++.||+.||+|||++|  ||||||||+|||++.              
T Consensus       109 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~--------------  174 (309)
T 3p86_A          109 LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDK--------------  174 (309)
T ss_dssp             CEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECT--------------
T ss_pred             eEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeC--------------
Confidence            99999999 8899999986531 23999999999999999999999999  999999999999954              


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  325 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~  325 (433)
                                   ++.+||+|||++......   .....||+.|+|||++.+..++.++|||||||++|+|++|..||..
T Consensus       175 -------------~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~  241 (309)
T 3p86_A          175 -------------KYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGN  241 (309)
T ss_dssp             -------------TCCEEECCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTT
T ss_pred             -------------CCcEEECCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence                         455666666666543322   2335799999999999999999999999999999999999999988


Q ss_pred             CChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHh
Q 013973          326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  405 (433)
Q Consensus       326 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  405 (433)
                      .+..+....+....                     ...                          ..+..+++++.+||.+
T Consensus       242 ~~~~~~~~~~~~~~---------------------~~~--------------------------~~~~~~~~~l~~li~~  274 (309)
T 3p86_A          242 LNPAQVVAAVGFKC---------------------KRL--------------------------EIPRNLNPQVAAIIEG  274 (309)
T ss_dssp             SCHHHHHHHHHHSC---------------------CCC--------------------------CCCTTSCHHHHHHHHH
T ss_pred             CCHHHHHHHHHhcC---------------------CCC--------------------------CCCccCCHHHHHHHHH
Confidence            77655443321110                     001                          1123567789999999


Q ss_pred             ccccCCCCCCCHHHHhc
Q 013973          406 LLRYDPTDRLTAREALR  422 (433)
Q Consensus       406 ~L~~dP~~R~ta~ell~  422 (433)
                      ||+.||.+|||+.|+++
T Consensus       275 ~l~~dP~~Rps~~~ll~  291 (309)
T 3p86_A          275 CWTNEPWKRPSFATIMD  291 (309)
T ss_dssp             HTCSSGGGSCCHHHHHH
T ss_pred             HccCChhhCcCHHHHHH
Confidence            99999999999999987

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=1.3e-46  Score=356.60  Aligned_cols=259  Identities=31%  Similarity=0.539  Sum_probs=213.3

Q ss_pred             ceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           93 ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        93 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      ..+.++|++++.||+|+||.||+|.+..+++.||+|++....   .....+..|+.+++++     .|++|+++++++..
T Consensus        18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~   92 (287)
T 2wei_A           18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-----DHPNIMKLFEILED   92 (287)
T ss_dssp             HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTC-----CCTTBCCEEEEEEC
T ss_pred             HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhc-----cCCCccEEEEEEeC
Confidence            345678999999999999999999999999999999986432   2356677899998887     67899999999999


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      .+.+++||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++            
T Consensus        93 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~------------  158 (287)
T 2wei_A           93 SSSFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKE------------  158 (287)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSS------------
T ss_pred             CCeEEEEEEccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCC------------
Confidence            99999999999 899999987754  799999999999999999999999999999999999995432            


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                                  .+..+||+|||++.......  ....||+.|+|||++.+ .++.++||||||+++|+|++|..||.+.
T Consensus       159 ------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~  225 (287)
T 2wei_A          159 ------------KDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK  225 (287)
T ss_dssp             ------------TTCCEEECSTTGGGTBCCCSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ------------CcccEEEeccCcceeecCCCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCC
Confidence                        24568888998876544332  23468999999999876 4899999999999999999999999887


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      +..+....+...                       ....+.                      ..+..++.++.+||.+|
T Consensus       226 ~~~~~~~~~~~~-----------------------~~~~~~----------------------~~~~~~~~~~~~li~~~  260 (287)
T 2wei_A          226 NEYDILKRVETG-----------------------KYAFDL----------------------PQWRTISDDAKDLIRKM  260 (287)
T ss_dssp             SHHHHHHHHHHC-----------------------CCCCCS----------------------GGGTTSCHHHHHHHHHH
T ss_pred             CHHHHHHHHHcC-----------------------CCCCCc----------------------hhhhhcCHHHHHHHHHH
Confidence            765544433221                       111100                      01235677899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      |+.||++|||+.|+|+||||++
T Consensus       261 l~~dp~~Rps~~ell~hp~~~~  282 (287)
T 2wei_A          261 LTFHPSLRITATQCLEHPWIQK  282 (287)
T ss_dssp             TCSSGGGSCCHHHHHHSHHHHH
T ss_pred             cccChhhCcCHHHHhcCHHHhc
Confidence            9999999999999999999964

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=5.1e-47  Score=365.22  Aligned_cols=254  Identities=26%  Similarity=0.459  Sum_probs=205.8

Q ss_pred             cCceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh-------hHHHHHHHHHHHHHHHhcCCCCCceEEe
Q 013973           91 LGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-------YREAAMIEIEVLQQLAKHDKGGNRCVQI  163 (433)
Q Consensus        91 ~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~i~~~  163 (433)
                      ..+.+.++|++.+.||+|+||.||+|.+..+++.||||+++....       ....+..|+.+++++.+   .|++++++
T Consensus        37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~---~~~~i~~~  113 (320)
T 3a99_A           37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS---GFSGVIRL  113 (320)
T ss_dssp             ---CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCS---SSCSBCCE
T ss_pred             ccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhcc---CCCCceEE
Confidence            344567889999999999999999999999999999999974321       22345678999999854   46889999


Q ss_pred             cceeecCCeEEEEEecC-C-CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccC
Q 013973          164 RNWFDYRNHICIVFEKL-G-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVP  241 (433)
Q Consensus       164 ~~~~~~~~~~~lV~e~~-~-~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~  241 (433)
                      ++++...+..++|||++ + ++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.       
T Consensus       114 ~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~-------  184 (320)
T 3a99_A          114 LDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL-------  184 (320)
T ss_dssp             EEEEECSSEEEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET-------
T ss_pred             EEEEecCCcEEEEEEcCCCCccHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeC-------
Confidence            99999999999999999 4 89999998754  7999999999999999999999999999999999999961       


Q ss_pred             CCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-CceeecCcccchhhhhCCCC-CCcchhHHHHHHHHHHHhC
Q 013973          242 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTG  319 (433)
Q Consensus       242 dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg  319 (433)
                                         .++.+||+|||++....... ....||+.|+|||++.+..+ +.++|||||||++|||++|
T Consensus       185 -------------------~~~~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g  245 (320)
T 3a99_A          185 -------------------NRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG  245 (320)
T ss_dssp             -------------------TTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHS
T ss_pred             -------------------CCCCEEEeeCccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHC
Confidence                               33456777777665443322 33479999999999987765 6889999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHH
Q 013973          320 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL  399 (433)
Q Consensus       320 ~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (433)
                      ..||...+.  ..                           .+...                          ....++.++
T Consensus       246 ~~pf~~~~~--~~---------------------------~~~~~--------------------------~~~~~~~~~  270 (320)
T 3a99_A          246 DIPFEHDEE--II---------------------------RGQVF--------------------------FRQRVSSEC  270 (320)
T ss_dssp             SCSCCSHHH--HH---------------------------HCCCC--------------------------CSSCCCHHH
T ss_pred             CCCCCChhh--hh---------------------------ccccc--------------------------ccccCCHHH
Confidence            999964211  00                           00000                          123567789


Q ss_pred             HHHHHhccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          400 THLLQGLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       400 ~~li~~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      .+||.+||+.||++|||+.|+++||||++..
T Consensus       271 ~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~  301 (320)
T 3a99_A          271 QHLIRWCLALRPSDRPTFEEIQNHPWMQDVL  301 (320)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred             HHHHHHHccCChhhCcCHHHHhcCHhhcCcc
Confidence            9999999999999999999999999998764

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=1.8e-46  Score=357.25  Aligned_cols=272  Identities=24%  Similarity=0.368  Sum_probs=198.4

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec-----
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY-----  169 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~-----  169 (433)
                      +.++|++++.||+|+||.||+|.+..+++.||||+++......+.+..|+.+++.+     .|+||+++++.+.+     
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~   78 (303)
T 1zy4_A            4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL-----NHQYVVRYYAAWLERRNFV   78 (303)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEEEECCCCC
T ss_pred             ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhc-----CchHHHHHHHHHHhhcchh
Confidence            34679999999999999999999999999999999986666667778899998887     67899999887754     


Q ss_pred             --------CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCcccc
Q 013973          170 --------RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKV  240 (433)
Q Consensus       170 --------~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i  240 (433)
                              .+.+|+||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.++|
T Consensus        79 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl  157 (303)
T 1zy4_A           79 KPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKI  157 (303)
T ss_dssp             C------CEEEEEEEEECCCSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEE
T ss_pred             hhhcccccCCceEEEEecCCCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEE
Confidence                    56789999999 889999998653 46888999999999999999999999999999999999977776666


Q ss_pred             CCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhC
Q 013973          241 PDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTG  319 (433)
Q Consensus       241 ~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg  319 (433)
                      +|||++..........         .+ +-..............||+.|+|||++.+. .++.++|||||||++|+|++ 
T Consensus       158 ~dfg~~~~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~-  226 (303)
T 1zy4_A          158 GDFGLAKNVHRSLDIL---------KL-DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY-  226 (303)
T ss_dssp             CCCCCCSCTTC-----------------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS-
T ss_pred             eeCcchhhcccccchh---------cc-ccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh-
Confidence            6666655432211000         00 000000000111234789999999999865 68999999999999999998 


Q ss_pred             CCCCCCCCh-HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhH
Q 013973          320 EALFQTHEN-LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  398 (433)
Q Consensus       320 ~~Pf~~~~~-~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (433)
                        ||..... .+....+                       ......+|.                      ......+..
T Consensus       227 --p~~~~~~~~~~~~~~-----------------------~~~~~~~~~----------------------~~~~~~~~~  259 (303)
T 1zy4_A          227 --PFSTGMERVNILKKL-----------------------RSVSIEFPP----------------------DFDDNKMKV  259 (303)
T ss_dssp             --CCSSHHHHHHHHHHH-----------------------HSTTCCCCT----------------------TCCTTTSHH
T ss_pred             --ccCCchhHHHHHHhc-----------------------cccccccCc----------------------cccccchHH
Confidence              5643211 1111111                       111111111                      112345667


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          399 LTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       399 ~~~li~~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      +.+||.+||+.||.+|||+.|+++||||+...
T Consensus       260 ~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (303)
T 1zy4_A          260 EKKIIRLLIDHDPNKRPGARTLLNSGWLPVKH  291 (303)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHSSCSCCCC
T ss_pred             HHHHHHHHHhcCcccCcCHHHHhCCCCcCCCC
Confidence            89999999999999999999999999998654

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=3.9e-46  Score=355.91  Aligned_cols=251  Identities=28%  Similarity=0.415  Sum_probs=208.2

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      .+.|++++.||+|+||.||+|.+..+++.||||++...  ....+.+..|+.+++.+     .|++|+++++++.....+
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~   95 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-----DSPYVTKYYGSYLKDTKL   95 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHC-----CCTTBCCEEEEEEETTEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhC-----CCCCEeEEEEEEecCCeE
Confidence            35699999999999999999999999999999999643  23456678899998887     678999999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      ++||||+ +++|.+++...   .+++..+..++.||+.||.|||+.||+||||||+|||++.                  
T Consensus        96 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~------------------  154 (303)
T 3a7i_A           96 WIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE------------------  154 (303)
T ss_dssp             EEEEECCTTEEHHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT------------------
T ss_pred             EEEEEeCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECC------------------
Confidence            9999999 78999998653   6999999999999999999999999999999999999954                  


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChH
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  329 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~  329 (433)
                               ++.+||+|||.+......   .....||+.|+|||++.+..++.++||||||+++|+|++|..||......
T Consensus       155 ---------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~  225 (303)
T 3a7i_A          155 ---------HGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM  225 (303)
T ss_dssp             ---------TSCEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH
T ss_pred             ---------CCCEEEeecccceecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH
Confidence                     455677777766543322   13357899999999999999999999999999999999999999876655


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +....+....                       .                         ......++.++.+||.+||+.
T Consensus       226 ~~~~~~~~~~-----------------------~-------------------------~~~~~~~~~~l~~li~~~l~~  257 (303)
T 3a7i_A          226 KVLFLIPKNN-----------------------P-------------------------PTLEGNYSKPLKEFVEACLNK  257 (303)
T ss_dssp             HHHHHHHHSC-----------------------C-------------------------CCCCSSCCHHHHHHHHHHCCS
T ss_pred             HHHHHhhcCC-----------------------C-------------------------CCCccccCHHHHHHHHHHcCC
Confidence            4433221100                       0                         001235677899999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCC
Q 013973          410 DPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       410 dP~~R~ta~ell~hp~f~~~  429 (433)
                      ||.+|||+.|+++||||...
T Consensus       258 dp~~Rps~~~ll~~~~~~~~  277 (303)
T 3a7i_A          258 EPSFRPTAKELLKHKFILRN  277 (303)
T ss_dssp             SGGGSCCHHHHTTCHHHHHH
T ss_pred             ChhhCcCHHHHhhChhhhcC
Confidence            99999999999999999643

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=2.8e-46  Score=352.42  Aligned_cols=254  Identities=22%  Similarity=0.370  Sum_probs=206.9

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEeccee--ecC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF--DYR  170 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~--~~~  170 (433)
                      .++|++++.||+|+||.||+|.++.+++.||+|++...   ....+.+..|+.+++.+     .|+||+++++++  ...
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~   79 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-----KHPNIVRYYDRIIDRTN   79 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEEEGGG
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhc-----CCCCCCeEEEEEecCCC
Confidence            36799999999999999999999999999999999642   33456677899999988     678999999977  456


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCC-----ceeccCCCCceEeeccCccccCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNN--YRSFPIDLVREIARQLLECIAFMHDLC-----MIHTDLKPENVLLVSSEYIKVPD  242 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~-----ivHrDlKp~NILl~~~~~~~i~d  242 (433)
                      ..+++||||+ +++|.+++....  ...+++..+..++.||+.||+|||+.|     |+||||||+|||++         
T Consensus        80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~---------  150 (279)
T 2w5a_A           80 TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD---------  150 (279)
T ss_dssp             TEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEEC---------
T ss_pred             ceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEc---------
Confidence            7899999999 789999997532  245999999999999999999999999     99999999999994         


Q ss_pred             CcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhC
Q 013973          243 YKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG  319 (433)
Q Consensus       243 fg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg  319 (433)
                                        .++.+||+|||.+.......   ....||+.|+|||++.+..++.++||||||+++|+|++|
T Consensus       151 ------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g  212 (279)
T 2w5a_A          151 ------------------GKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCAL  212 (279)
T ss_dssp             ------------------SSSCEEECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHS
T ss_pred             ------------------CCCCEEEecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHC
Confidence                              45567888888776544332   124789999999999999999999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHH
Q 013973          320 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL  399 (433)
Q Consensus       320 ~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (433)
                      ..||...+..+....+...                       ...                         ..+..++.++
T Consensus       213 ~~p~~~~~~~~~~~~i~~~-----------------------~~~-------------------------~~~~~~~~~l  244 (279)
T 2w5a_A          213 MPPFTAFSQKELAGKIREG-----------------------KFR-------------------------RIPYRYSDEL  244 (279)
T ss_dssp             SCSSCCSSHHHHHHHHHHT-----------------------CCC-------------------------CCCTTSCHHH
T ss_pred             CCCCcccCHHHHHHHHhhc-----------------------ccc-------------------------cCCcccCHHH
Confidence            9999887655444332211                       000                         0123457789


Q ss_pred             HHHHHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          400 THLLQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       400 ~~li~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      .+||.+||+.||++|||+.|+++|+|+++.
T Consensus       245 ~~li~~~l~~~p~~Rps~~~ll~~~~~~~~  274 (279)
T 2w5a_A          245 NEIITRMLNLKDYHRPSVEEILENPLILEH  274 (279)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHTSTTCCGG
T ss_pred             HHHHHHHcCCCcccCCCHHHHHhChhhhhh
Confidence            999999999999999999999999999865

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=1.7e-46  Score=365.34  Aligned_cols=275  Identities=20%  Similarity=0.389  Sum_probs=211.1

Q ss_pred             CceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhh------------------HHHHHHHHHHHHHHHhc
Q 013973           92 GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY------------------REAAMIEIEVLQQLAKH  153 (433)
Q Consensus        92 ~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~------------------~~~~~~E~~~l~~l~~~  153 (433)
                      .....++|++.+.||+|+||.||+|.+  +++.||+|++......                  .+.+..|+.+++.+   
T Consensus        26 ~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---  100 (348)
T 2pml_X           26 KDKYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDI---  100 (348)
T ss_dssp             SCEEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTC---
T ss_pred             cccccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhC---
Confidence            445568899999999999999999998  8999999999743221                  16778899998888   


Q ss_pred             CCCCCceEEecceeecCCeEEEEEecC-CCCHHHH------HHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccC
Q 013973          154 DKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDF------LRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDL  225 (433)
Q Consensus       154 ~~~~~~i~~~~~~~~~~~~~~lV~e~~-~~~L~~~------l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~ivHrDl  225 (433)
                        .|+||+++++++.+.+.+++||||+ +++|.++      +.......+++..+..++.||+.||.|||+ .||+||||
T Consensus       101 --~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl  178 (348)
T 2pml_X          101 --KNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDV  178 (348)
T ss_dssp             --CCTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCC
T ss_pred             --CCCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCC
Confidence              6789999999999999999999999 7899998      665435689999999999999999999999 99999999


Q ss_pred             CCCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC-CCceeecCcccchhhhhCC-CCCC-
Q 013973          226 KPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-QNYIVSTRHYRAPEVILGL-GWTY-  302 (433)
Q Consensus       226 Kp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~~-  302 (433)
                      ||+|||++                           .++.+||+|||.+...... .....||+.|+|||++.+. .++. 
T Consensus       179 ~p~Nil~~---------------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  231 (348)
T 2pml_X          179 KPSNILMD---------------------------KNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGA  231 (348)
T ss_dssp             CGGGEEEC---------------------------TTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHH
T ss_pred             ChHhEEEc---------------------------CCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcc
Confidence            99999994                           4456777777776543322 2334789999999999887 6666 


Q ss_pred             cchhHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccc
Q 013973          303 PCDIWSVGCILVELCTGEALFQTHEN-LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKL  381 (433)
Q Consensus       303 ~~DvwSlGv~l~elltg~~Pf~~~~~-~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  381 (433)
                      ++|||||||++|+|++|..||..... .+....+.                       .+...++.......   .    
T Consensus       232 ~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~-----------------------~~~~~~~~~~~~~~---~----  281 (348)
T 2pml_X          232 KVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIR-----------------------TKNIEYPLDRNHFL---Y----  281 (348)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHT-----------------------SCCCCCCCSSSSST---T----
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHh-----------------------ccCcCCccchhhhh---c----
Confidence            99999999999999999999987665 44333321                       12222221110000   0    


Q ss_pred             hhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          382 PRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      .............++.++.+||.+||+.||.+|||+.|+++||||++..
T Consensus       282 ~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~~  330 (348)
T 2pml_X          282 PLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTN  330 (348)
T ss_dssp             TTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             cccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCCC
Confidence            0000000112246788999999999999999999999999999998754

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=1.4e-45  Score=353.39  Aligned_cols=265  Identities=17%  Similarity=0.228  Sum_probs=200.7

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeec-chhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG-IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~-~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      .++|++.+.||+|+||+||+|.+..+++.||+|++.. .....+.+..|+.+++.+     .|+||+++++++.+.+..+
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~~~~~~   83 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL-----EHPNVLKFIGVLYKDKRLN   83 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEEEETTEEE
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhC-----CCcCcccEEEEEecCCeeE
Confidence            3679999999999999999999999999999998854 344566778899998887     6799999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++.......
T Consensus        84 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  162 (310)
T 3s95_A           84 FITEYIKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK  162 (310)
T ss_dssp             EEEECCTTCBHHHHHHHCC-TTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred             EEEEecCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence            999999 889999998753 479999999999999999999999999999999999999766666666666554332111


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA  333 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~  333 (433)
                      .....        .  ..............+||+.|+|||++.+..++.++||||||+++|||++|..||......... 
T Consensus       163 ~~~~~--------~--~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~-  231 (310)
T 3s95_A          163 TQPEG--------L--RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD-  231 (310)
T ss_dssp             ---------------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT-
T ss_pred             ccccc--------c--ccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH-
Confidence            00000        0  000000000112457999999999999999999999999999999999999998653211000 


Q ss_pred             HHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCC
Q 013973          334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTD  413 (433)
Q Consensus       334 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  413 (433)
                                                     .              ............+..+++++.+||.+||+.||++
T Consensus       232 -------------------------------~--------------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~  266 (310)
T 3s95_A          232 -------------------------------F--------------GLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEK  266 (310)
T ss_dssp             -------------------------------S--------------SBCHHHHHHHTCCTTCCTTHHHHHHHHTCSSGGG
T ss_pred             -------------------------------H--------------hhhhhccccccCCCCCCHHHHHHHHHHccCChhh
Confidence                                           0              0000000111224567788999999999999999


Q ss_pred             CCCHHHHhc
Q 013973          414 RLTAREALR  422 (433)
Q Consensus       414 R~ta~ell~  422 (433)
                      |||+.|+++
T Consensus       267 Rps~~~l~~  275 (310)
T 3s95_A          267 RPSFVKLEH  275 (310)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999876

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=4.1e-46  Score=349.61  Aligned_cols=246  Identities=26%  Similarity=0.384  Sum_probs=203.2

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      .++|++++.||+|+||.||+|.+. +++.||+|++.......+.+..|+.+++++     .|+||+++++++.+.+..++
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~l   82 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKL-----SHPKLVQLYGVCLEQAPICL   82 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTC-----CCTTBCCEEEEECSSSSEEE
T ss_pred             hhhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccCHHHHHHHHHHHHhC-----CCCCEeeEEEEEecCCceEE
Confidence            367999999999999999999987 466799999986555567788999999988     57899999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      ||||+ +++|.+++.... ..+++..+..++.|++.||+|||++||+||||||+|||++.+                   
T Consensus        83 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~-------------------  142 (269)
T 4hcu_A           83 VFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGEN-------------------  142 (269)
T ss_dssp             EEECCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGG-------------------
T ss_pred             EEEeCCCCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCC-------------------
Confidence            99999 889999997654 469999999999999999999999999999999999999544                   


Q ss_pred             ccccCCCCCCEEEEecCCccccCCC----CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPD----QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  329 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~  329 (433)
                              +.+||+|||.+......    .....||+.|+|||++.+..++.++||||||+++|+|++ |..||...+..
T Consensus       143 --------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~  214 (269)
T 4hcu_A          143 --------QVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS  214 (269)
T ss_dssp             --------GCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH
T ss_pred             --------CCEEeccccccccccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH
Confidence                    45666667766543322    122356788999999999999999999999999999999 99999887766


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +....+......                                                ..+...+.++.+||.+||+.
T Consensus       215 ~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~li~~~l~~  246 (269)
T 4hcu_A          215 EVVEDISTGFRL------------------------------------------------YKPRLASTHVYQIMNHCWRE  246 (269)
T ss_dssp             HHHHHHHTTCCC------------------------------------------------CCCTTSCHHHHHHHHHHTCS
T ss_pred             HHHHHHhcCccC------------------------------------------------CCCCcCCHHHHHHHHHHccC
Confidence            554433211000                                                01124567899999999999


Q ss_pred             CCCCCCCHHHHhcC
Q 013973          410 DPTDRLTAREALRH  423 (433)
Q Consensus       410 dP~~R~ta~ell~h  423 (433)
                      ||++|||+.|+++|
T Consensus       247 ~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          247 RPEDRPAFSRLLRQ  260 (269)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             CcccCcCHHHHHHH
Confidence            99999999999875

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=6.9e-46  Score=355.93  Aligned_cols=256  Identities=27%  Similarity=0.435  Sum_probs=199.6

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      ...++|++++.||+|+||.||+|.+. +++.||+|++...   ....+.+..|+.+++.+.+   ++++|+++++++...
T Consensus        25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~---~~~~iv~~~~~~~~~  100 (313)
T 3cek_A           25 VKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ---HSDKIIRLYDYEITD  100 (313)
T ss_dssp             ETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGG---GCTTBCCEEEEEECS
T ss_pred             eccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccc---cCCceEEEEEEeecC
Confidence            33467999999999999999999986 4788999998632   3345667889999999965   357899999999999


Q ss_pred             CeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          171 NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       171 ~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      +.+++|||+.+++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||+++ +              
T Consensus       101 ~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~-~--------------  163 (313)
T 3cek_A          101 QYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-G--------------  163 (313)
T ss_dssp             SEEEEEECCCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-T--------------
T ss_pred             CEEEEEEecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC-C--------------
Confidence            9999999977999999998764  7999999999999999999999999999999999999942 4              


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhC-----------CCCCCcchhHHHHHHHH
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILG-----------LGWTYPCDIWSVGCILV  314 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGv~l~  314 (433)
                                   .+||+|||++.......     ....||+.|+|||++.+           ..++.++|||||||++|
T Consensus       164 -------------~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~  230 (313)
T 3cek_A          164 -------------MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY  230 (313)
T ss_dssp             -------------EEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHH
T ss_pred             -------------eEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHH
Confidence                         45666666555432221     23468999999999976           46889999999999999


Q ss_pred             HHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcC
Q 013973          315 ELCTGEALFQTHENLE-HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD  393 (433)
Q Consensus       315 elltg~~Pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (433)
                      +|++|..||....... ....   ...+                  ....                          ..+.
T Consensus       231 el~~g~~pf~~~~~~~~~~~~---~~~~------------------~~~~--------------------------~~~~  263 (313)
T 3cek_A          231 YMTYGKTPFQQIINQISKLHA---IIDP------------------NHEI--------------------------EFPD  263 (313)
T ss_dssp             HHHHSSCTTTTCCSHHHHHHH---HHCT------------------TSCC--------------------------CCCC
T ss_pred             HHHhCCCchhhHHHHHHHHHH---HHhc------------------cccc--------------------------CCcc
Confidence            9999999997653321 1111   1000                  0000                          1123


Q ss_pred             CchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          394 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       394 ~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      ..+.++.+||.+||+.||.+|||+.|+|+||||+...
T Consensus       264 ~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~  300 (313)
T 3cek_A          264 IPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  300 (313)
T ss_dssp             CSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC-
T ss_pred             cchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCC
Confidence            4467899999999999999999999999999998653

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=7.5e-46  Score=357.90  Aligned_cols=247  Identities=24%  Similarity=0.308  Sum_probs=199.6

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCe---EEEEEEeec--chhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKE---MVAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~---~vAiK~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      ..++|++.+.||+|+||.||+|.+..+++   .||||+++.  .....+.+..|+.+++.+     .|+||+++++++.+
T Consensus        47 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~  121 (325)
T 3kul_A           47 EASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF-----DHPNIIRLEGVVTR  121 (325)
T ss_dssp             CGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEECG
T ss_pred             ChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhC-----CCCCCCcEEEEEEe
Confidence            35789999999999999999999986554   599999974  234456678899998887     67999999999999


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      .+.+|+||||+ +++|.+++.... ..+++..+..++.||+.||+|||++|||||||||+|||++.              
T Consensus       122 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~--------------  186 (325)
T 3kul_A          122 GRLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDS--------------  186 (325)
T ss_dssp             GGCCEEEEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT--------------
T ss_pred             CCccEEEeeCCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECC--------------
Confidence            99999999999 889999997653 46999999999999999999999999999999999999954              


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCC------CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEA  321 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~  321 (433)
                                   ++.+||+|||++.......      ....||+.|+|||++.+..++.++|||||||++|||++ |..
T Consensus       187 -------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~  253 (325)
T 3kul_A          187 -------------NLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGER  253 (325)
T ss_dssp             -------------TCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred             -------------CCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCC
Confidence                         4456666666665433221      11245778999999999999999999999999999999 999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       322 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      ||.+....+....+....                      ..                          ..+..++.++.+
T Consensus       254 p~~~~~~~~~~~~~~~~~----------------------~~--------------------------~~~~~~~~~l~~  285 (325)
T 3kul_A          254 PYWNMTNRDVISSVEEGY----------------------RL--------------------------PAPMGCPHALHQ  285 (325)
T ss_dssp             TTTTSCHHHHHHHHHTTC----------------------CC--------------------------CCCTTCCHHHHH
T ss_pred             CcccCCHHHHHHHHHcCC----------------------CC--------------------------CCCCCcCHHHHH
Confidence            998877665544332110                      00                          012356778999


Q ss_pred             HHHhccccCCCCCCCHHHHhc
Q 013973          402 LLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       402 li~~~L~~dP~~R~ta~ell~  422 (433)
                      ||.+||+.||++|||+.|+++
T Consensus       286 li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          286 LMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHccCChhhCcCHHHHHH
Confidence            999999999999999999875

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=6.7e-46  Score=351.40  Aligned_cols=251  Identities=22%  Similarity=0.322  Sum_probs=209.2

Q ss_pred             CceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           92 GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        92 ~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .+...++|++.+.||+|+||.||+|.+..+++.||+|++.......+.+..|+.+++.+     .|+||+++++++.+.+
T Consensus         8 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~   82 (288)
T 3kfa_A            8 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-----KHPNLVQLLGVCTREP   82 (288)
T ss_dssp             TBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHC-----CCTTBCCEEEEECSSS
T ss_pred             ccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEccCC
Confidence            34456789999999999999999999999999999999987666677788999999998     5789999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+++||||+ +++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.++              
T Consensus        83 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~--------------  148 (288)
T 3kfa_A           83 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH--------------  148 (288)
T ss_dssp             SEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGG--------------
T ss_pred             CEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCC--------------
Confidence            999999999 79999999887666799999999999999999999999999999999999995544              


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQT  325 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~  325 (433)
                                   .+||+|||.+.......    ....||+.|+|||++.+..++.++||||||+++|+|++ |..||..
T Consensus       149 -------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~  215 (288)
T 3kfa_A          149 -------------LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG  215 (288)
T ss_dssp             -------------CEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             -------------CEEEccCccceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence                         56666666665443322    22357889999999999999999999999999999999 9999987


Q ss_pred             CChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHh
Q 013973          326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  405 (433)
Q Consensus       326 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  405 (433)
                      .+..+....+....                      .                          ...+..++.++.+||.+
T Consensus       216 ~~~~~~~~~~~~~~----------------------~--------------------------~~~~~~~~~~l~~li~~  247 (288)
T 3kfa_A          216 IDLSQVYELLEKDY----------------------R--------------------------MERPEGCPEKVYELMRA  247 (288)
T ss_dssp             CCGGGHHHHHHTTC----------------------C--------------------------CCCCTTCCHHHHHHHHH
T ss_pred             CCHHHHHHHHhccC----------------------C--------------------------CCCCCCCCHHHHHHHHH
Confidence            66544333221100                      0                          01123567789999999


Q ss_pred             ccccCCCCCCCHHHHhc
Q 013973          406 LLRYDPTDRLTAREALR  422 (433)
Q Consensus       406 ~L~~dP~~R~ta~ell~  422 (433)
                      ||+.||.+|||+.|+++
T Consensus       248 ~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          248 CWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             HTCSSGGGSCCHHHHHH
T ss_pred             HhCCChhhCcCHHHHHH
Confidence            99999999999999976

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=1e-45  Score=346.62  Aligned_cols=246  Identities=22%  Similarity=0.302  Sum_probs=202.4

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      .++|++++.||+|+||.||+|.+. ++..||+|+++......+.+..|+.+++.+     .|+||+++++++...+..++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~l   80 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMSEDEFFQEAQTMMKL-----SHPKLVKFYGVCSKEYPIYI   80 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBCHHHHHHHHHHHHHC-----CCTTBCCEEEEECSSSSEEE
T ss_pred             hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCcHHHHHHHHHHHHhC-----CCCCEeeEEEEEccCCceEE
Confidence            468999999999999999999876 567799999986555567788999999998     57899999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      ||||+ +++|.+++...+ ..+++..+..++.||+.||.|||++||+||||||+|||++.                    
T Consensus        81 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~--------------------  139 (268)
T 3sxs_A           81 VTEYISNGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDR--------------------  139 (268)
T ss_dssp             EEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECT--------------------
T ss_pred             EEEccCCCcHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECC--------------------
Confidence            99999 899999998754 35999999999999999999999999999999999999954                    


Q ss_pred             ccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  329 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~  329 (433)
                             ++.+||+|||.+.......    ....||+.|+|||++.+..++.++||||||+++|+|++ |..||...+..
T Consensus       140 -------~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~  212 (268)
T 3sxs_A          140 -------DLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS  212 (268)
T ss_dssp             -------TCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH
T ss_pred             -------CCCEEEccCccceecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH
Confidence                   4456666666665433322    11246778999999999899999999999999999999 99999887765


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +....+.....                      ..                          .+...+.++.+||.+||+.
T Consensus       213 ~~~~~~~~~~~----------------------~~--------------------------~~~~~~~~l~~li~~~l~~  244 (268)
T 3sxs_A          213 EVVLKVSQGHR----------------------LY--------------------------RPHLASDTIYQIMYSCWHE  244 (268)
T ss_dssp             HHHHHHHTTCC----------------------CC--------------------------CCTTSCHHHHHHHHHTTCS
T ss_pred             HHHHHHHcCCC----------------------CC--------------------------CCCcChHHHHHHHHHHcCC
Confidence            54433221100                      00                          1123466899999999999


Q ss_pred             CCCCCCCHHHHhcC
Q 013973          410 DPTDRLTAREALRH  423 (433)
Q Consensus       410 dP~~R~ta~ell~h  423 (433)
                      ||++|||+.|+++|
T Consensus       245 ~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          245 LPEKRPTFQQLLSS  258 (268)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999999986

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=8.3e-47  Score=359.93  Aligned_cols=264  Identities=25%  Similarity=0.413  Sum_probs=185.2

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      .++|++.+.||+|+||.||+|.+..+++.||||++....  ...+.+..|+.+++.+     .|+||+++++++...+..
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~   88 (303)
T 2vwi_A           14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQC-----HHPNIVSYYTSFVVKDEL   88 (303)
T ss_dssp             CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCC-----CCTTBCCEEEEEESSSCE
T ss_pred             hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhc-----CCCCEeeEEEEEeecCCc
Confidence            467999999999999999999999999999999886432  2234455677666655     679999999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhc------CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCC
Q 013973          174 CIVFEKL-GSSLYDFLRKN------NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  246 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~------~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~  246 (433)
                      ++||||+ +++|.+++...      ....+++..+..++.||+.||.|||++||+||||||+|||++.++          
T Consensus        89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~----------  158 (303)
T 2vwi_A           89 WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDG----------  158 (303)
T ss_dssp             EEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTC----------
T ss_pred             EEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCC----------
Confidence            9999999 89999998741      224699999999999999999999999999999999999996554          


Q ss_pred             CCCCCCCcccccCCCCCCEEEEecCCccccCCC--------CCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHH
Q 013973          247 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--------QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELC  317 (433)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--------~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~ell  317 (433)
                                       .+||+|||.+......        .....||+.|+|||++.+ ..++.++||||||+++|+|+
T Consensus       159 -----------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~  221 (303)
T 2vwi_A          159 -----------------SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELA  221 (303)
T ss_dssp             -----------------CEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHH
T ss_pred             -----------------CEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHH
Confidence                             4555555554332211        123478999999999976 56899999999999999999


Q ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchh
Q 013973          318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG  397 (433)
Q Consensus       318 tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  397 (433)
                      +|..||..............  +..+                    ....                 ..........++.
T Consensus       222 ~g~~pf~~~~~~~~~~~~~~--~~~~--------------------~~~~-----------------~~~~~~~~~~~~~  262 (303)
T 2vwi_A          222 TGAAPYHKYPPMKVLMLTLQ--NDPP--------------------SLET-----------------GVQDKEMLKKYGK  262 (303)
T ss_dssp             HSSCTTTTSCGGGHHHHHHT--SSCC--------------------CTTC----------------------CCCCCCCH
T ss_pred             hCCCCCccCchhhHHHHHhc--cCCC--------------------cccc-----------------ccccchhhhhhhH
Confidence            99999987655443321111  0000                    0000                 0000112245677


Q ss_pred             HHHHHHHhccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          398 DLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       398 ~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      ++.+||.+||+.||.+|||+.|+++||||++..
T Consensus       263 ~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  295 (303)
T 2vwi_A          263 SFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK  295 (303)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHHHHTSTTC----
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhhChhhhcCC
Confidence            899999999999999999999999999998754

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=7.2e-46  Score=362.42  Aligned_cols=251  Identities=22%  Similarity=0.311  Sum_probs=198.2

Q ss_pred             ecCcEEEEeeeeccccEEEEEEE-----ECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEeccee
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECW-----DRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  167 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~-----~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~  167 (433)
                      ..++|++.+.||+|+||.||+|.     +..+++.||||+++..  ....+.+..|+.++.++.    +|+||+++++++
T Consensus        20 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----~hpniv~~~~~~   95 (359)
T 3vhe_A           20 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG----HHLNVVNLLGAC   95 (359)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC----CCTTBCCEEEEE
T ss_pred             cccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhc----CCcceeeeeeee
Confidence            35789999999999999999998     5667799999999743  234456788999999883    468899999998


Q ss_pred             ecCC-eEEEEEecC-CCCHHHHHHhcCC----------------------------------------------------
Q 013973          168 DYRN-HICIVFEKL-GSSLYDFLRKNNY----------------------------------------------------  193 (433)
Q Consensus       168 ~~~~-~~~lV~e~~-~~~L~~~l~~~~~----------------------------------------------------  193 (433)
                      ...+ .+++||||+ +|+|.+++.....                                                    
T Consensus        96 ~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (359)
T 3vhe_A           96 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSD  175 (359)
T ss_dssp             CSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------------
T ss_pred             ecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccch
Confidence            7754 599999999 8899999986542                                                    


Q ss_pred             ------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccCCC
Q 013973          194 ------------RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPK  261 (433)
Q Consensus       194 ------------~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~  261 (433)
                                  ..+++..+..++.||+.||.|||++|||||||||+|||++.++.                        
T Consensus       176 ~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~------------------------  231 (359)
T 3vhe_A          176 VEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV------------------------  231 (359)
T ss_dssp             --------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC------------------------
T ss_pred             hhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCc------------------------
Confidence                        12899999999999999999999999999999999999965554                        


Q ss_pred             CCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 013973          262 SSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMM  335 (433)
Q Consensus       262 ~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~~~~~i  335 (433)
                         +||+|||++.......     ....||+.|+|||++.+..++.++|||||||++|||++ |..||.+....+.....
T Consensus       232 ---~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~  308 (359)
T 3vhe_A          232 ---VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR  308 (359)
T ss_dssp             ---EEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHH
T ss_pred             ---EEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHH
Confidence               5555555554322111     22468999999999999999999999999999999998 99999876543332221


Q ss_pred             HHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCC
Q 013973          336 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  415 (433)
Q Consensus       336 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  415 (433)
                      .....                     ..                          ..+..+++++.+||.+||+.||.+||
T Consensus       309 ~~~~~---------------------~~--------------------------~~~~~~~~~l~~li~~~l~~dP~~Rp  341 (359)
T 3vhe_A          309 LKEGT---------------------RM--------------------------RAPDYTTPEMYQTMLDCWHGEPSQRP  341 (359)
T ss_dssp             HHHTC---------------------CC--------------------------CCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHcCC---------------------CC--------------------------CCCCCCCHHHHHHHHHHccCChhhCC
Confidence            11100                     00                          11234677899999999999999999


Q ss_pred             CHHHHhcC
Q 013973          416 TAREALRH  423 (433)
Q Consensus       416 ta~ell~h  423 (433)
                      |+.|+++|
T Consensus       342 s~~ell~~  349 (359)
T 3vhe_A          342 TFSELVEH  349 (359)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999976

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=3.3e-46  Score=366.44  Aligned_cols=256  Identities=20%  Similarity=0.277  Sum_probs=207.7

Q ss_pred             eecCcEEEEeeeeccccEEEEEEE-----ECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecce
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECW-----DRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  166 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~-----~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~  166 (433)
                      ...++|++++.||+|+||.||+|.     +..+++.||||+++..  ......+..|+.+++.+     .|+||++++++
T Consensus        68 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~~~~~  142 (367)
T 3l9p_A           68 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-----NHQNIVRCIGV  142 (367)
T ss_dssp             CCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEE
T ss_pred             cCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhC-----CCCCCCeEEEE
Confidence            345789999999999999999999     4567789999998642  34445677899999888     67999999999


Q ss_pred             eecCCeEEEEEecC-CCCHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCcccc
Q 013973          167 FDYRNHICIVFEKL-GSSLYDFLRKNNY-----RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKV  240 (433)
Q Consensus       167 ~~~~~~~~lV~e~~-~~~L~~~l~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i  240 (433)
                      +......++||||+ +++|.+++.....     ..+++..+..++.||+.||+|||++|||||||||+|||++.+|    
T Consensus       143 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~----  218 (367)
T 3l9p_A          143 SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG----  218 (367)
T ss_dssp             ECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSS----
T ss_pred             EecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCC----
Confidence            99999999999999 8899999987532     3589999999999999999999999999999999999996433    


Q ss_pred             CCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccC-----CCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHH
Q 013973          241 PDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER-----PDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE  315 (433)
Q Consensus       241 ~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~e  315 (433)
                                          .+..+||+|||+++...     .......||+.|+|||++.+..++.++|||||||++||
T Consensus       219 --------------------~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~e  278 (367)
T 3l9p_A          219 --------------------PGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE  278 (367)
T ss_dssp             --------------------TTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             --------------------CCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHH
Confidence                                23468888998876321     12233568999999999999999999999999999999


Q ss_pred             HHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCC
Q 013973          316 LCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH  394 (433)
Q Consensus       316 llt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (433)
                      |++ |..||...+..+....+....                      ...                          .+..
T Consensus       279 llt~g~~pf~~~~~~~~~~~i~~~~----------------------~~~--------------------------~~~~  310 (367)
T 3l9p_A          279 IFSLGYMPYPSKSNQEVLEFVTSGG----------------------RMD--------------------------PPKN  310 (367)
T ss_dssp             HHTTSCCSSTTCCHHHHHHHHHTTC----------------------CCC--------------------------CCTT
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHcCC----------------------CCC--------------------------CCcc
Confidence            998 999998877665544332111                      000                          1235


Q ss_pred             chhHHHHHHHhccccCCCCCCCHHHHhcCCCC
Q 013973          395 SAGDLTHLLQGLLRYDPTDRLTAREALRHPFF  426 (433)
Q Consensus       395 ~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f  426 (433)
                      ++.++.+||.+||+.||++|||+.|+++|.++
T Consensus       311 ~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~  342 (367)
T 3l9p_A          311 CPGPVYRIMTQCWQHQPEDRPNFAIILERIEY  342 (367)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            56789999999999999999999999998654

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=1.2e-45  Score=348.91  Aligned_cols=246  Identities=21%  Similarity=0.323  Sum_probs=200.4

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      .++|++++.||+|+||.||+|.+. ++..||+|+++......+.+..|+.+++.+     .|+||+++++++.+.+.+++
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~l   96 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNL-----SHEKLVQLYGVCTKQRPIFI   96 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTC-----CCTTBCCEEEEECSSSSEEE
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCCHHHHHHHHHHHhcC-----CCCCEeeEEEEEecCCCeEE
Confidence            467999999999999999999876 567799999986555567788899999888     57899999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      ||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++                     
T Consensus        97 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~---------------------  154 (283)
T 3gen_A           97 ITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---------------------  154 (283)
T ss_dssp             EECCCTTCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEEC---------------------
T ss_pred             EEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEc---------------------
Confidence            99999 899999997643 3699999999999999999999999999999999999994                     


Q ss_pred             ccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  329 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~  329 (433)
                            .++.+||+|||.+.......    ....||+.|+|||++.+..++.++||||||+++|+|++ |..||...+..
T Consensus       155 ------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~  228 (283)
T 3gen_A          155 ------DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS  228 (283)
T ss_dssp             ------TTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH
T ss_pred             ------CCCCEEEccccccccccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh
Confidence                  44567777777765433221    12356788999999999999999999999999999998 99999887766


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +....+......                      .                          .+...+.++.+||.+||+.
T Consensus       229 ~~~~~~~~~~~~----------------------~--------------------------~~~~~~~~l~~li~~~l~~  260 (283)
T 3gen_A          229 ETAEHIAQGLRL----------------------Y--------------------------RPHLASEKVYTIMYSCWHE  260 (283)
T ss_dssp             HHHHHHHTTCCC----------------------C--------------------------CCTTCCHHHHHHHHHTTCS
T ss_pred             HHHHHHhcccCC----------------------C--------------------------CCCcCCHHHHHHHHHHccC
Confidence            554433221110                      0                          1124567899999999999


Q ss_pred             CCCCCCCHHHHhcC
Q 013973          410 DPTDRLTAREALRH  423 (433)
Q Consensus       410 dP~~R~ta~ell~h  423 (433)
                      ||.+|||+.|+++|
T Consensus       261 ~p~~Rps~~~ll~~  274 (283)
T 3gen_A          261 KADERPTFKILLSN  274 (283)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             ChhHCcCHHHHHHH
Confidence            99999999999875

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=9.2e-46  Score=351.52  Aligned_cols=256  Identities=24%  Similarity=0.346  Sum_probs=199.7

Q ss_pred             EEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEE
Q 013973           99 YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  177 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~  177 (433)
                      |.....||+|+||.||+|.+..+++.||+|++.... ...+.+..|+.+++.+     .|+||+++++++...+.+++||
T Consensus        24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~   98 (295)
T 2clq_A           24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHL-----KHKNIVQYLGSFSENGFIKIFM   98 (295)
T ss_dssp             TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTC-----CCTTBCCEEEEEEETTEEEEEE
T ss_pred             CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhC-----CCCCEeeEeeEEEeCCcEEEEE
Confidence            334458999999999999999999999999987432 3445677888888887     6789999999999999999999


Q ss_pred             ecC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          178 EKL-GSSLYDFLRKNN-YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       178 e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      ||+ +++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||++.                     
T Consensus        99 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~---------------------  157 (295)
T 2clq_A           99 EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT---------------------  157 (295)
T ss_dssp             ECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET---------------------
T ss_pred             EeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEEC---------------------
Confidence            999 899999998653 235678999999999999999999999999999999999964                     


Q ss_pred             cccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCC--CCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          256 FKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLG--WTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                           .++.+||+|||.+......   .....||+.|+|||++.+..  ++.++||||||+++|+|++|..||.......
T Consensus       158 -----~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~  232 (295)
T 2clq_A          158 -----YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ  232 (295)
T ss_dssp             -----TTCCEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH
T ss_pred             -----CCCCEEEeecccccccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh
Confidence                 1446777777766543321   23357899999999998653  8899999999999999999999997544332


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ............                                              ...+..++.++.+||.+||+.|
T Consensus       233 ~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~li~~~l~~d  266 (295)
T 2clq_A          233 AAMFKVGMFKVH----------------------------------------------PEIPESMSAEAKAFILKCFEPD  266 (295)
T ss_dssp             HHHHHHHHHCCC----------------------------------------------CCCCTTSCHHHHHHHHHTTCSS
T ss_pred             HHHHhhcccccc----------------------------------------------ccccccCCHHHHHHHHHHccCC
Confidence            211100000000                                              0112356778999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCCCC
Q 013973          411 PTDRLTAREALRHPFFTRDHL  431 (433)
Q Consensus       411 P~~R~ta~ell~hp~f~~~~~  431 (433)
                      |++|||+.|+|+||||+....
T Consensus       267 p~~Rps~~~ll~~~~~~~~~~  287 (295)
T 2clq_A          267 PDKRACANDLLVDEFLKVSSK  287 (295)
T ss_dssp             TTTSCCHHHHHTSGGGCC---
T ss_pred             hhhCCCHHHHhcChhhhhccc
Confidence            999999999999999987654

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=4.8e-46  Score=356.75  Aligned_cols=254  Identities=24%  Similarity=0.456  Sum_probs=195.7

Q ss_pred             ceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh-------hHHHHHHHHHHHHHHHhcCCCCCceEEecc
Q 013973           93 ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK-------YREAAMIEIEVLQQLAKHDKGGNRCVQIRN  165 (433)
Q Consensus        93 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-------~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~  165 (433)
                      +.+.++|++.+.||+|+||.||+|.+..+++.||||++.....       .......|+.++.++.... .|+||+++++
T Consensus        27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-~h~~i~~~~~  105 (312)
T 2iwi_A           27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGG-GHPGVIRLLD  105 (312)
T ss_dssp             ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSC-CCSSBCCEEE
T ss_pred             hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccC-CCCCeeeEEE
Confidence            3456789999999999999999999999999999999964321       1223456889998885433 5789999999


Q ss_pred             eeecCCeEEEEEec-C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCC
Q 013973          166 WFDYRNHICIVFEK-L-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDY  243 (433)
Q Consensus       166 ~~~~~~~~~lV~e~-~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~df  243 (433)
                      ++...+..++|||+ + +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.         
T Consensus       106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~---------  174 (312)
T 2iwi_A          106 WFETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDL---------  174 (312)
T ss_dssp             EC-----CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEET---------
T ss_pred             EEecCCeEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeC---------
Confidence            99999999999998 5 889999998764  6999999999999999999999999999999999999961         


Q ss_pred             cCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-CceeecCcccchhhhhCCCCC-CcchhHHHHHHHHHHHhCCC
Q 013973          244 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHYRAPEVILGLGWT-YPCDIWSVGCILVELCTGEA  321 (433)
Q Consensus       244 g~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlGv~l~elltg~~  321 (433)
                                       .++.+||+|||++....... ....||..|+|||++.+..+. .++|||||||++|+|++|..
T Consensus       175 -----------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~  237 (312)
T 2iwi_A          175 -----------------RRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDI  237 (312)
T ss_dssp             -----------------TTTEEEECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSC
T ss_pred             -----------------CCCeEEEEEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCC
Confidence                             33456777777665443322 334789999999999877764 58999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       322 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      ||.....  ..                           .....                          .+..++.++.+
T Consensus       238 pf~~~~~--~~---------------------------~~~~~--------------------------~~~~~~~~~~~  262 (312)
T 2iwi_A          238 PFERDQE--IL---------------------------EAELH--------------------------FPAHVSPDCCA  262 (312)
T ss_dssp             SCCSHHH--HH---------------------------HTCCC--------------------------CCTTSCHHHHH
T ss_pred             CCCChHH--Hh---------------------------hhccC--------------------------CcccCCHHHHH
Confidence            9974211  00                           00001                          12356778999


Q ss_pred             HHHhccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          402 LLQGLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       402 li~~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      ||.+||+.||++|||+.|+++||||+...
T Consensus       263 li~~~l~~~p~~Rps~~e~l~~~~~~~~~  291 (312)
T 2iwi_A          263 LIRRCLAPKPSSRPSLEEILLDPWMQTPA  291 (312)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHHSTTTCC--
T ss_pred             HHHHHccCChhhCcCHHHHhcChhhcCch
Confidence            99999999999999999999999998753

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=1.7e-45  Score=354.74  Aligned_cols=255  Identities=18%  Similarity=0.254  Sum_probs=186.4

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCe---EEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKE---MVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~---~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      ..++|++.+.||+|+||.||+|.+..++.   .||||+++..   ....+.+..|+.+++.+     .|+||+++++++.
T Consensus        21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~   95 (323)
T 3qup_A           21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF-----DHPHVAKLVGVSL   95 (323)
T ss_dssp             C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTC-----CCTTBCCCCEEEE
T ss_pred             ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHC-----CCCceehhhceee
Confidence            35679999999999999999999887775   7999998642   23456677888888887     6789999999998


Q ss_pred             cCCeE------EEEEecC-CCCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCc
Q 013973          169 YRNHI------CIVFEKL-GSSLYDFLRKNNY----RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEY  237 (433)
Q Consensus       169 ~~~~~------~lV~e~~-~~~L~~~l~~~~~----~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~  237 (433)
                      .....      ++||||+ +++|.+++.....    ..+++..+..++.||+.||.|||++||+||||||+|||++.+  
T Consensus        96 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~--  173 (323)
T 3qup_A           96 RSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAED--  173 (323)
T ss_dssp             CC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT--
T ss_pred             ccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCC--
Confidence            76655      9999999 8899999865321    258999999999999999999999999999999999999544  


Q ss_pred             cccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHHHH
Q 013973          238 IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCI  312 (433)
Q Consensus       238 ~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~  312 (433)
                                               +.+||+|||++.......     ....+|+.|+|||++.+..++.++|||||||+
T Consensus       174 -------------------------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  228 (323)
T 3qup_A          174 -------------------------MTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVT  228 (323)
T ss_dssp             -------------------------SCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             -------------------------CCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHH
Confidence                                     456666666655432221     12356788999999999999999999999999


Q ss_pred             HHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhh
Q 013973          313 LVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH  391 (433)
Q Consensus       313 l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (433)
                      +|+|++ |..||.+.+..+....+...                      ...                          ..
T Consensus       229 l~ell~~g~~p~~~~~~~~~~~~~~~~----------------------~~~--------------------------~~  260 (323)
T 3qup_A          229 MWEIMTRGQTPYAGIENAEIYNYLIGG----------------------NRL--------------------------KQ  260 (323)
T ss_dssp             HHHHHTTSCCTTTTCCGGGHHHHHHTT----------------------CCC--------------------------CC
T ss_pred             HHHHHhCCCCCccccChHHHHHHHhcC----------------------CCC--------------------------CC
Confidence            999999 99999877665544332110                      000                          01


Q ss_pred             cCCchhHHHHHHHhccccCCCCCCC-------HHHHhcCCCCCCC
Q 013973          392 VDHSAGDLTHLLQGLLRYDPTDRLT-------AREALRHPFFTRD  429 (433)
Q Consensus       392 ~~~~~~~~~~li~~~L~~dP~~R~t-------a~ell~hp~f~~~  429 (433)
                      +..++.++.+||.+||+.||++|||       .++++.|||+...
T Consensus       261 ~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~  305 (323)
T 3qup_A          261 PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLST  305 (323)
T ss_dssp             CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC------
T ss_pred             CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCC
Confidence            2356678999999999999999999       7899999999754

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=1.5e-45  Score=349.12  Aligned_cols=253  Identities=23%  Similarity=0.344  Sum_probs=205.4

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCC-------eEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCCceEEecce
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERK-------EMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  166 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~-------~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~  166 (433)
                      ..++|++.+.||+|+||.||+|.+..++       ..||+|++.... ...+.+..|+.+++.+     .|+||++++++
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~   80 (289)
T 4fvq_A            6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL-----SHKHLVLNYGV   80 (289)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTS-----CCTTBCCEEEE
T ss_pred             chhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhC-----CCCCEeEEEEE
Confidence            3578999999999999999999998777       579999986433 4456678899999888     67999999999


Q ss_pred             eecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcC
Q 013973          167 FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  245 (433)
Q Consensus       167 ~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~  245 (433)
                      +...+..++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++..++.|+  
T Consensus        81 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~--  157 (289)
T 4fvq_A           81 CVCGDENILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNP--  157 (289)
T ss_dssp             ECCTTCCEEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBC--
T ss_pred             EEeCCCCEEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCccccccc--
Confidence            99999999999999 899999998754 34999999999999999999999999999999999999988876665544  


Q ss_pred             CCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhC-CCCC
Q 013973          246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTG-EALF  323 (433)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg-~~Pf  323 (433)
                                       ..+||+|||.+...... ....||+.|+|||++.+ ..++.++|||||||++|||++| .+||
T Consensus       158 -----------------~~~kl~Dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~  219 (289)
T 4fvq_A          158 -----------------PFIKLSDPGISITVLPK-DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPL  219 (289)
T ss_dssp             -----------------CEEEECCCCSCTTTSCH-HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred             -----------------ceeeeccCcccccccCc-cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCc
Confidence                             35899999988654332 23468999999999998 6799999999999999999995 5555


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      ...+........ ....                                                 ..+...+.++.+||
T Consensus       220 ~~~~~~~~~~~~-~~~~-------------------------------------------------~~~~~~~~~l~~li  249 (289)
T 4fvq_A          220 SALDSQRKLQFY-EDRH-------------------------------------------------QLPAPKAAELANLI  249 (289)
T ss_dssp             TTSCHHHHHHHH-HTTC-------------------------------------------------CCCCCSSCTTHHHH
T ss_pred             cccchHHHHHHh-hccC-------------------------------------------------CCCCCCCHHHHHHH
Confidence            554433322111 1000                                                 01224456789999


Q ss_pred             HhccccCCCCCCCHHHHhcC
Q 013973          404 QGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~h  423 (433)
                      .+||+.||++|||+.|+++|
T Consensus       250 ~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          250 NNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             HHHSCSSGGGSCCHHHHHHH
T ss_pred             HHHcCCChhHCcCHHHHHHH
Confidence            99999999999999999875

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=1.2e-44  Score=343.97  Aligned_cols=255  Identities=22%  Similarity=0.269  Sum_probs=196.9

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+..|+.+++.+.++    +++..+..+....+..
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~----~~i~~~~~~~~~~~~~   80 (296)
T 3uzp_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGG----VGIPTIRWCGAEGDYN   80 (296)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS-SCCHHHHHHHHHHHHTTS----TTCCCEEEEEEETTEE
T ss_pred             eeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-chhHHHHHHHHHHHhhcC----CCCCccccccCCCCce
Confidence            45678999999999999999999999999999999987433 234577899999999543    2344455555778899


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       174 ~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      ++||||++++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.+                  
T Consensus        81 ~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~------------------  141 (296)
T 3uzp_A           81 VMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLG------------------  141 (296)
T ss_dssp             EEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCG------------------
T ss_pred             EEEEEecCCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecC------------------
Confidence            9999999999999998543 479999999999999999999999999999999999999411                  


Q ss_pred             cccccCCCCCCEEEEecCCccccCCC----------CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPD----------QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF  323 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf  323 (433)
                            +.++.+||+|||.+......          .....||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       142 ------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf  215 (296)
T 3uzp_A          142 ------KKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW  215 (296)
T ss_dssp             ------GGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ------CCCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCC
Confidence                  12345666666665533322          13357999999999999999999999999999999999999999


Q ss_pred             CCCChH---HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHH
Q 013973          324 QTHENL---EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  400 (433)
Q Consensus       324 ~~~~~~---~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (433)
                      .+.+..   +.+..+.....                                            ..........++.++.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~~l~  251 (296)
T 3uzp_A          216 QGLKAATKRQKYERISEKKM--------------------------------------------STPIEVLCKGYPSEFA  251 (296)
T ss_dssp             SSCCCSSSSSHHHHHHHHHH--------------------------------------------HSCHHHHTTTSCHHHH
T ss_pred             CCcCchhhhhhhhhhccccc--------------------------------------------CCchHHHHhhCCHHHH
Confidence            864321   11111111000                                            0001112245678899


Q ss_pred             HHHHhccccCCCCCCCHHHHhc
Q 013973          401 HLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       401 ~li~~~L~~dP~~R~ta~ell~  422 (433)
                      +||.+||+.||++|||+.++++
T Consensus       252 ~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          252 TYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHHHHTSCTTCCCCHHHHHH
T ss_pred             HHHHHHHhcCcCcCCCHHHHHH
Confidence            9999999999999999998875

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=3.7e-45  Score=358.50  Aligned_cols=257  Identities=14%  Similarity=0.217  Sum_probs=193.5

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCC-----CeEEEEEEeecchhhHHHHHHHHHHHHHHHh----------cCCCCCce
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRER-----KEMVAIKIVRGIKKYREAAMIEIEVLQQLAK----------HDKGGNRC  160 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~-----~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~----------~~~~~~~i  160 (433)
                      .++|++.+.||+|+||.||+|.+..+     ++.||||++....   .....|+.+++.+.+          ....|+||
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~i  110 (364)
T 3op5_A           34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDN---GPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGV  110 (364)
T ss_dssp             CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTC---HHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCS
T ss_pred             CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccc---hhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCC
Confidence            35899999999999999999998765     5789999987432   234456666655533          34478999


Q ss_pred             EEecceeecC----CeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccC
Q 013973          161 VQIRNWFDYR----NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSE  236 (433)
Q Consensus       161 ~~~~~~~~~~----~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~  236 (433)
                      +++++++...    .+.||||||+|++|.+++.... ..+++..+..++.||+.||+|||++|||||||||+|||++.  
T Consensus       111 v~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~--  187 (364)
T 3op5_A          111 PKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANA-KRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY--  187 (364)
T ss_dssp             CCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEES--
T ss_pred             CeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEec--
Confidence            9999998764    5689999999999999998753 47999999999999999999999999999999999999962  


Q ss_pred             ccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC----------CCceeecCcccchhhhhCCCCCCcchh
Q 013973          237 YIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----------QNYIVSTRHYRAPEVILGLGWTYPCDI  306 (433)
Q Consensus       237 ~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~Dv  306 (433)
                                             +.++.+||+|||++......          ....+||+.|+|||++.+..++.++||
T Consensus       188 -----------------------~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di  244 (364)
T 3op5_A          188 -----------------------KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDL  244 (364)
T ss_dssp             -----------------------SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHH
T ss_pred             -----------------------CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhH
Confidence                                   13345666666666432211          123469999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHH
Q 013973          307 WSVGCILVELCTGEALFQTHEN-LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ  385 (433)
Q Consensus       307 wSlGv~l~elltg~~Pf~~~~~-~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (433)
                      |||||++|||++|..||.+... ..............                                         +.
T Consensus       245 ~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~-----------------------------------------~~  283 (364)
T 3op5_A          245 EILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYREN-----------------------------------------IA  283 (364)
T ss_dssp             HHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHC-----------------------------------------HH
T ss_pred             HHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhh-----------------------------------------HH
Confidence            9999999999999999985332 22221111110000                                         00


Q ss_pred             HHHhhh--cCCchhHHHHHHHhccccCCCCCCCHHHHhc
Q 013973          386 NLIMQH--VDHSAGDLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       386 ~~~~~~--~~~~~~~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                      ......  ...++.++.+||..||+.||++||++.++++
T Consensus       284 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          284 SLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             HHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            111111  1356789999999999999999999998874

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.5e-44  Score=356.53  Aligned_cols=251  Identities=20%  Similarity=0.297  Sum_probs=202.5

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECC-------CCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEec
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRE-------RKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIR  164 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~-------~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~  164 (433)
                      ...++|++.+.||+|+||.||+|.+..       .+..||+|+++..  ......+..|+++++.+.    .|+||++++
T Consensus        66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----~hpnIv~~~  141 (382)
T 3tt0_A           66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG----KHKNIINLL  141 (382)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC----CCTTBCCEE
T ss_pred             cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhc----CCchhhhhe
Confidence            345789999999999999999999753       3367999999743  334466778999999883    458899999


Q ss_pred             ceeecCCeEEEEEecC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCc
Q 013973          165 NWFDYRNHICIVFEKL-GSSLYDFLRKNN--------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPEN  229 (433)
Q Consensus       165 ~~~~~~~~~~lV~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~N  229 (433)
                      +++...+.+++||||+ +++|.+++....              ...+++..+..++.||+.||+|||++|||||||||+|
T Consensus       142 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N  221 (382)
T 3tt0_A          142 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARN  221 (382)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             eeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcce
Confidence            9999999999999999 889999998754              1359999999999999999999999999999999999


Q ss_pred             eEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhCCCCCCcc
Q 013973          230 VLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYPC  304 (433)
Q Consensus       230 ILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~  304 (433)
                      ||++.+                           +.+||+|||++......     .....||+.|+|||++.+..++.++
T Consensus       222 Ill~~~---------------------------~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~  274 (382)
T 3tt0_A          222 VLVTED---------------------------NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS  274 (382)
T ss_dssp             EEECTT---------------------------CCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHH
T ss_pred             EEEcCC---------------------------CcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchh
Confidence            999544                           45666666665543321     1223678899999999999999999


Q ss_pred             hhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchh
Q 013973          305 DIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPR  383 (433)
Q Consensus       305 DvwSlGv~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (433)
                      |||||||++|+|++ |..||.+.+..+....+....                      ..                    
T Consensus       275 DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~----------------------~~--------------------  312 (382)
T 3tt0_A          275 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH----------------------RM--------------------  312 (382)
T ss_dssp             HHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC----------------------CC--------------------
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC----------------------CC--------------------
Confidence            99999999999999 999998876655443322110                      00                    


Q ss_pred             HHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          384 LQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       384 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                            ..+..++.++.+||.+||+.||++|||+.|++++
T Consensus       313 ------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          313 ------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             ------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                  0123567789999999999999999999999875

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=6.1e-46  Score=358.02  Aligned_cols=263  Identities=21%  Similarity=0.208  Sum_probs=191.1

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC----e
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN----H  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~----~  172 (433)
                      ++|++.+.||+|+||+||+|.+.  ++.||||++............|+.+++.+     .|+||+++++++....    .
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~~~~~~~~   96 (322)
T 3soc_A           24 MPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQNEYEVYSLPGM-----KHENILQFIGAEKRGTSVDVD   96 (322)
T ss_dssp             EEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHTSTTC-----CCTTBCCEEEEEEEECSSSEE
T ss_pred             hhchhhheecccCceEEEEEEEC--CCEEEEEEeecCchHHHHHHHHHHHHhcC-----CCCCchhhcceeccCCCCCce
Confidence            57999999999999999999875  78999999976555555556677777666     6799999999988743    5


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC----------CceeccCCCCceEeeccCccccC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL----------CMIHTDLKPENVLLVSSEYIKVP  241 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~----------~ivHrDlKp~NILl~~~~~~~i~  241 (433)
                      +++||||+ +++|.+++...   .+++..+..++.||+.||.|||+.          |||||||||+|||++.       
T Consensus        97 ~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~-------  166 (322)
T 3soc_A           97 LWLITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKN-------  166 (322)
T ss_dssp             EEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECT-------
T ss_pred             EEEEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECC-------
Confidence            89999999 88999999874   599999999999999999999999          9999999999999954       


Q ss_pred             CCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhCC-----CCCCcchhHHHHH
Q 013973          242 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGL-----GWTYPCDIWSVGC  311 (433)
Q Consensus       242 dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwSlGv  311 (433)
                                          ++.+||+|||++......     ....+||+.|+|||++.+.     .++.++|||||||
T Consensus       167 --------------------~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~  226 (322)
T 3soc_A          167 --------------------NLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGL  226 (322)
T ss_dssp             --------------------TCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHH
T ss_pred             --------------------CCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHH
Confidence                                445666666666433221     1235799999999999873     4567889999999


Q ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhh
Q 013973          312 ILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH  391 (433)
Q Consensus       312 ~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (433)
                      ++|||++|+.||.+........................      ............                  ..  ..
T Consensus       227 il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~------------------~~--~~  280 (322)
T 3soc_A          227 VLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQE------VVVHKKKRPVLR------------------DY--WQ  280 (322)
T ss_dssp             HHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHH------HHTTSCCCCCCC------------------GG--GG
T ss_pred             HHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhh------hhhcccCCCCcc------------------cc--cc
Confidence            99999999999986543221111111111111110000      000000000000                  00  00


Q ss_pred             cCCchhHHHHHHHhccccCCCCCCCHHHHhc
Q 013973          392 VDHSAGDLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       392 ~~~~~~~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                      ....+.++.+||.+||+.||++|||+.|+++
T Consensus       281 ~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          281 KHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             SSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            1123456999999999999999999999986

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=4.2e-45  Score=346.95  Aligned_cols=255  Identities=22%  Similarity=0.275  Sum_probs=192.4

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      .+.++|++.+.||+|+||.||+|.+..+++.||||++... .....+..|+.+++.+.++    +++..+..++...+..
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~e~~~l~~l~~~----~~i~~~~~~~~~~~~~   80 (296)
T 4hgt_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVK-TKHPQLHIESKIYKMMQGG----VGIPTIRWCGAEGDYN   80 (296)
T ss_dssp             -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTS----TTCCCEEEEEEETTEE
T ss_pred             ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccc-ccchHHHHHHHHHHHhcCC----CCCCeeeeecCCCCce
Confidence            3457899999999999999999999999999999987643 2334577899999998543    3455556666788899


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       174 ~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      ++||||++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.+                  
T Consensus        81 ~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~------------------  141 (296)
T 4hgt_A           81 VMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLG------------------  141 (296)
T ss_dssp             EEEEECCCCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCG------------------
T ss_pred             EEEEEccCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeecc------------------
Confidence            9999999999999998543 469999999999999999999999999999999999999311                  


Q ss_pred             cccccCCCCCCEEEEecCCccccCCC----------CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPD----------QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF  323 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf  323 (433)
                            +.++.+||+|||.+......          .....||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       142 ------~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf  215 (296)
T 4hgt_A          142 ------KKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW  215 (296)
T ss_dssp             ------GGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ------CCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCC
Confidence                  12334566666655433222          12357999999999999999999999999999999999999999


Q ss_pred             CCCChHH---HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHH
Q 013973          324 QTHENLE---HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  400 (433)
Q Consensus       324 ~~~~~~~---~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (433)
                      .+.+...   ....+....                                            ...........++.++.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~~~l~  251 (296)
T 4hgt_A          216 QGLKAATKRQKYERISEKK--------------------------------------------MSTPIEVLCKGYPSEFA  251 (296)
T ss_dssp             SSCCCSSSSSHHHHHHHHH--------------------------------------------HHSCHHHHTTTSCHHHH
T ss_pred             cccchhhhhhhhhhhhccc--------------------------------------------ccchhhhhhccCCHHHH
Confidence            7643221   111111000                                            00001112245678999


Q ss_pred             HHHHhccccCCCCCCCHHHHhc
Q 013973          401 HLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       401 ~li~~~L~~dP~~R~ta~ell~  422 (433)
                      +||.+||+.||++|||+.++++
T Consensus       252 ~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          252 TYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHHHHTSCTTCCCCHHHHHH
T ss_pred             HHHHHHHhcCCCCCCCHHHHHH
Confidence            9999999999999999999876

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=2e-45  Score=362.21  Aligned_cols=246  Identities=22%  Similarity=0.386  Sum_probs=199.6

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      .++|++.+.||+|+||.||+|.++.+++.||||+++..  ......+..|+.+++.+     .|+||+++++++...+.+
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~~~~~  187 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY-----SHPNIVRLIGVCTQKQPI  187 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTC-----CCTTBCCEEEEECSSSSC
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhC-----CCCCEEEEEEEEecCCCc
Confidence            46899999999999999999999999999999998743  22334567899998887     679999999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      |+||||+ +++|.+++...+ ..+++..+..++.||+.||+|||++|||||||||+|||++.++                
T Consensus       188 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~----------------  250 (377)
T 3cbl_A          188 YIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKN----------------  250 (377)
T ss_dssp             EEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC----------------
T ss_pred             EEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCC----------------
Confidence            9999999 899999998653 3699999999999999999999999999999999999995544                


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH  326 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~  326 (433)
                                 .+||+|||++.......     ....+|..|+|||++.+..++.++|||||||++|||++ |..||.+.
T Consensus       251 -----------~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~  319 (377)
T 3cbl_A          251 -----------VLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL  319 (377)
T ss_dssp             -----------CEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTS
T ss_pred             -----------cEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                       45555555554322211     12246788999999999899999999999999999998 99999887


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      +..+....+..                      .....                          .+..++.++.+||.+|
T Consensus       320 ~~~~~~~~~~~----------------------~~~~~--------------------------~~~~~~~~l~~li~~c  351 (377)
T 3cbl_A          320 SNQQTREFVEK----------------------GGRLP--------------------------CPELCPDAVFRLMEQC  351 (377)
T ss_dssp             CHHHHHHHHHT----------------------TCCCC--------------------------CCTTCCHHHHHHHHHH
T ss_pred             CHHHHHHHHHc----------------------CCCCC--------------------------CCCCCCHHHHHHHHHH
Confidence            66544332211                      00111                          1234677899999999


Q ss_pred             cccCCCCCCCHHHHhc
Q 013973          407 LRYDPTDRLTAREALR  422 (433)
Q Consensus       407 L~~dP~~R~ta~ell~  422 (433)
                      |+.||++|||+.++++
T Consensus       352 l~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          352 WAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             TCSSGGGSCCHHHHHH
T ss_pred             cCCCchhCcCHHHHHH
Confidence            9999999999999875

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=2.8e-45  Score=373.57  Aligned_cols=249  Identities=20%  Similarity=0.321  Sum_probs=205.7

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      ....+|++.+.||+|+||.||+|.++.++..||||+++......+.+..|+.+++++     .|+||+++++++...+.+
T Consensus       217 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~l~~~~~~~~~~  291 (495)
T 1opk_A          217 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-----KHPNLVQLLGVCTREPPF  291 (495)
T ss_dssp             CCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHC-----CCTTBCCEEEEECSSSSC
T ss_pred             cCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhc-----CCCCEeeEEEEEecCCcE
Confidence            345689999999999999999999999999999999986655667788999999998     679999999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      ||||||+ +|+|.++|.......+++..+..++.||+.||+|||++|||||||||+|||++.++.               
T Consensus       292 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~---------------  356 (495)
T 1opk_A          292 YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHL---------------  356 (495)
T ss_dssp             EEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGC---------------
T ss_pred             EEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCc---------------
Confidence            9999999 899999998866667999999999999999999999999999999999999965554               


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCC
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE  327 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~  327 (433)
                                  +||+|||+++......    ....+|..|+|||++.+..++.++|||||||++|||++ |..||.+.+
T Consensus       357 ------------~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~  424 (495)
T 1opk_A          357 ------------VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID  424 (495)
T ss_dssp             ------------EEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             ------------EEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC
Confidence                        5555555554332211    12346788999999999999999999999999999999 999998766


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ..+....+....                      ..                          ..+..++.++.+||.+||
T Consensus       425 ~~~~~~~~~~~~----------------------~~--------------------------~~~~~~~~~l~~li~~cl  456 (495)
T 1opk_A          425 LSQVYELLEKDY----------------------RM--------------------------ERPEGCPEKVYELMRACW  456 (495)
T ss_dssp             GGGHHHHHHTTC----------------------CC--------------------------CCCTTCCHHHHHHHHHHT
T ss_pred             HHHHHHHHHcCC----------------------CC--------------------------CCCCCCCHHHHHHHHHHc
Confidence            544332221100                      00                          112356778999999999


Q ss_pred             ccCCCCCCCHHHHhc
Q 013973          408 RYDPTDRLTAREALR  422 (433)
Q Consensus       408 ~~dP~~R~ta~ell~  422 (433)
                      +.||++|||+.++++
T Consensus       457 ~~dP~~RPs~~el~~  471 (495)
T 1opk_A          457 QWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             CcChhHCcCHHHHHH
Confidence            999999999999876

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=1.1e-44  Score=364.97  Aligned_cols=244  Identities=23%  Similarity=0.323  Sum_probs=198.3

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC-CeEE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR-NHIC  174 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~-~~~~  174 (433)
                      .++|++.+.||+|+||.||+|.+.  ++.||||+++... ..+.+..|+.+++++     .|+||+++++++... +.+|
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~-~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~~  263 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-TAQAFLAEASVMTQL-----RHSNLVQLLGVIVEEKGGLY  263 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT-TSHHHHHHHHHHHTC-----CCTTBCCEEEEEECTTSCEE
T ss_pred             hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch-HHHHHHHHHHHHHhc-----cCCCEEEEEEEEEcCCCceE
Confidence            468999999999999999999875  6789999997543 456788899999988     678999999987655 4899


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +||||+ +|+|.+++...+...+++..+..++.||+.||+|||++|||||||||+|||++.                   
T Consensus       264 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~-------------------  324 (450)
T 1k9a_A          264 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSE-------------------  324 (450)
T ss_dssp             EEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT-------------------
T ss_pred             EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECC-------------------
Confidence            999999 889999999876556899999999999999999999999999999999999954                   


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHL  332 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~~~  332 (433)
                              ++.+||+|||+++..........+|..|+|||++.+..++.++|||||||++|||++ |..||.+.+..+..
T Consensus       325 --------~~~~kl~DfG~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~  396 (450)
T 1k9a_A          325 --------DNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV  396 (450)
T ss_dssp             --------TSCEEECCCTTCEECC------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHH
T ss_pred             --------CCCEEEeeCCCcccccccccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence                    456677777776644333333467889999999999999999999999999999998 99999876554433


Q ss_pred             HHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCC
Q 013973          333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPT  412 (433)
Q Consensus       333 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  412 (433)
                      ..+.                       .+..                         ...+..+++++.+||.+||+.||.
T Consensus       397 ~~i~-----------------------~~~~-------------------------~~~p~~~~~~l~~li~~cl~~dp~  428 (450)
T 1k9a_A          397 PRVE-----------------------KGYK-------------------------MDAPDGCPPAVYDVMKNCWHLDAA  428 (450)
T ss_dssp             HHHH-----------------------TTCC-------------------------CCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             HHHH-----------------------cCCC-------------------------CCCCCcCCHHHHHHHHHHcCCChh
Confidence            2221                       1100                         012245678999999999999999


Q ss_pred             CCCCHHHHhc
Q 013973          413 DRLTAREALR  422 (433)
Q Consensus       413 ~R~ta~ell~  422 (433)
                      +|||+.++++
T Consensus       429 ~Rpt~~~l~~  438 (450)
T 1k9a_A          429 TRPTFLQLRE  438 (450)
T ss_dssp             GSCCHHHHHH
T ss_pred             HCcCHHHHHH
Confidence            9999999874

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=6e-45  Score=344.84  Aligned_cols=250  Identities=20%  Similarity=0.239  Sum_probs=200.4

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhh--------HHHHHHHHHHHHHHHhcCCCCCceEEeccee
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY--------REAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  167 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--------~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~  167 (433)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++......        .+.+..|+.+++.+     .|+||+++++++
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~   92 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-----NHPNIVKLYGLM   92 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTC-----CCTTBCCEEEEE
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhC-----CCCCchhhheee
Confidence            46799999999999999999999999999999998532211        15667888888887     678999999999


Q ss_pred             ecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCceEeeccCccccCCCc
Q 013973          168 DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC--MIHTDLKPENVLLVSSEYIKVPDYK  244 (433)
Q Consensus       168 ~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlKp~NILl~~~~~~~i~dfg  244 (433)
                      .+..  ++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++|  |+||||||+|||++.++.       
T Consensus        93 ~~~~--~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~-------  162 (287)
T 4f0f_A           93 HNPP--RMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDE-------  162 (287)
T ss_dssp             TTTT--EEEEECCTTCBHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCT-------
T ss_pred             cCCC--eEEEEecCCCCHHHHHhccc-CCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCC-------
Confidence            7766  6999999 899999987654 47999999999999999999999999  999999999999965432       


Q ss_pred             CCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhh--CCCCCCcchhHHHHHHHHHHHhCCCC
Q 013973          245 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVIL--GLGWTYPCDIWSVGCILVELCTGEAL  322 (433)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwSlGv~l~elltg~~P  322 (433)
                                     +....+||+|||++...........||+.|+|||++.  ...++.++|||||||++|+|++|..|
T Consensus       163 ---------------~~~~~~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p  227 (287)
T 4f0f_A          163 ---------------NAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP  227 (287)
T ss_dssp             ---------------TCSCCEEECCCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCT
T ss_pred             ---------------CCceeEEeCCCCccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCC
Confidence                           2233488999998876555555568999999999984  45578999999999999999999999


Q ss_pred             CCCCChHHH--HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHH
Q 013973          323 FQTHENLEH--LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  400 (433)
Q Consensus       323 f~~~~~~~~--~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (433)
                      |...+....  ...+.. .+..                                              ...+..+++++.
T Consensus       228 f~~~~~~~~~~~~~~~~-~~~~----------------------------------------------~~~~~~~~~~l~  260 (287)
T 4f0f_A          228 FDEYSYGKIKFINMIRE-EGLR----------------------------------------------PTIPEDCPPRLR  260 (287)
T ss_dssp             TTTCCCCHHHHHHHHHH-SCCC----------------------------------------------CCCCTTSCHHHH
T ss_pred             CccccccHHHHHHHHhc-cCCC----------------------------------------------CCCCcccCHHHH
Confidence            986543322  111100 0000                                              011235677899


Q ss_pred             HHHHhccccCCCCCCCHHHHhc
Q 013973          401 HLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       401 ~li~~~L~~dP~~R~ta~ell~  422 (433)
                      +||.+||+.||.+|||+.|+++
T Consensus       261 ~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          261 NVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHhcCChhhCcCHHHHHH
Confidence            9999999999999999999986

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=6.8e-45  Score=353.15  Aligned_cols=250  Identities=21%  Similarity=0.317  Sum_probs=201.8

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEEC-----CCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecce
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  166 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~-----~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~  166 (433)
                      ...++|++++.||+|+||.||+|.+.     .+++.||+|+++..  ....+.+..|+.+++.+     .|+||++++++
T Consensus        44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~  118 (343)
T 1luf_A           44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-----DNPNIVKLLGV  118 (343)
T ss_dssp             CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC-----CCTTBCCEEEE
T ss_pred             ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhC-----CCCCEEEEEEE
Confidence            34578999999999999999999987     45589999999743  23456678899999888     67899999999


Q ss_pred             eecCCeEEEEEecC-CCCHHHHHHhcC----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Q 013973          167 FDYRNHICIVFEKL-GSSLYDFLRKNN----------------------YRSFPIDLVREIARQLLECIAFMHDLCMIHT  223 (433)
Q Consensus       167 ~~~~~~~~lV~e~~-~~~L~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHr  223 (433)
                      +...+.+|+||||+ +++|.+++....                      ...+++.++..++.||+.||.|||++||+||
T Consensus       119 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~  198 (343)
T 1luf_A          119 CAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHR  198 (343)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             EccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence            99999999999999 889999998742                      1469999999999999999999999999999


Q ss_pred             cCCCCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCC-----CCCceeecCcccchhhhhCC
Q 013973          224 DLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP-----DQNYIVSTRHYRAPEVILGL  298 (433)
Q Consensus       224 DlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~  298 (433)
                      ||||+|||++.++                           .+||+|||++.....     ......||+.|+|||++.+.
T Consensus       199 Dlkp~NIl~~~~~---------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  251 (343)
T 1luf_A          199 DLATRNCLVGENM---------------------------VVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYN  251 (343)
T ss_dssp             CCSGGGEEECGGG---------------------------CEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHC
T ss_pred             CCCcceEEECCCC---------------------------eEEEeecCCCcccccCccccccCCCcccceecChhhhccC
Confidence            9999999995544                           566666666543221     11234688999999999999


Q ss_pred             CCCCcchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhh
Q 013973          299 GWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS  377 (433)
Q Consensus       299 ~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  377 (433)
                      .++.++|||||||++|+|++ |..||.+....+....+..                       +..              
T Consensus       252 ~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-----------------------~~~--------------  294 (343)
T 1luf_A          252 RYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRD-----------------------GNI--------------  294 (343)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT-----------------------TCC--------------
T ss_pred             CcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhC-----------------------CCc--------------
Confidence            99999999999999999999 9999988766554433211                       100              


Q ss_pred             hccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          378 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                                 ...+..++.++.+||.+||+.||++|||+.+++++
T Consensus       295 -----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~  329 (343)
T 1luf_A          295 -----------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRI  329 (343)
T ss_dssp             -----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence                       01123567789999999999999999999999764

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=1.4e-44  Score=339.23  Aligned_cols=252  Identities=23%  Similarity=0.337  Sum_probs=193.5

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      .++|++.+.||+|+||.||+|.+.  ++.||+|+++...     ...+.+..|+.+++.+     .|+||+++++++...
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~   78 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAML-----KHPNIIALRGVCLKE   78 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHC-----CCTTBCCEEEEECCC
T ss_pred             hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhc-----CCCCEeeEEEEEecC
Confidence            467999999999999999999874  7889999986432     2235567889988888     678999999999999


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCCCceEeeccCccccCCCcCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC---MIHTDLKPENVLLVSSEYIKVPDYKSS  246 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlKp~NILl~~~~~~~i~dfg~~  246 (433)
                      +..++||||+ +++|.+++..   ..+++..+..++.||+.||.|||++|   |+||||||+|||++..+.-        
T Consensus        79 ~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~--------  147 (271)
T 3dtc_A           79 PNLCLVMEFARGGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVEN--------  147 (271)
T ss_dssp             --CEEEEECCTTEEHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSS--------
T ss_pred             CceEEEEEcCCCCCHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEeccccc--------
Confidence            9999999999 8999999864   36999999999999999999999999   8999999999999642210        


Q ss_pred             CCCCCCCcccccCCCCCCEEEEecCCccccCCCC-CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 013973          247 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQT  325 (433)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~  325 (433)
                                 ....++.+||+|||.+....... ....||+.|+|||++.+..++.++||||||+++|+|++|..||.+
T Consensus       148 -----------~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  216 (271)
T 3dtc_A          148 -----------GDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG  216 (271)
T ss_dssp             -----------SCCSSCCEEECCCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTT
T ss_pred             -----------ccccCcceEEccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence                       00135678999999887544332 345799999999999999999999999999999999999999987


Q ss_pred             CChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHh
Q 013973          326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQG  405 (433)
Q Consensus       326 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  405 (433)
                      .+.......+..                       ....                        ...+..++.++.+||.+
T Consensus       217 ~~~~~~~~~~~~-----------------------~~~~------------------------~~~~~~~~~~~~~li~~  249 (271)
T 3dtc_A          217 IDGLAVAYGVAM-----------------------NKLA------------------------LPIPSTCPEPFAKLMED  249 (271)
T ss_dssp             SCHHHHHHHHHT-----------------------SCCC------------------------CCCCTTCCHHHHHHHHH
T ss_pred             CCHHHHHHhhhc-----------------------CCCC------------------------CCCCcccCHHHHHHHHH
Confidence            765544322111                       0000                        01123567789999999


Q ss_pred             ccccCCCCCCCHHHHhcC
Q 013973          406 LLRYDPTDRLTAREALRH  423 (433)
Q Consensus       406 ~L~~dP~~R~ta~ell~h  423 (433)
                      ||+.||.+|||+.|+++|
T Consensus       250 ~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          250 CWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             HTCSSGGGSCCHHHHHHH
T ss_pred             HhcCCcccCcCHHHHHHH
Confidence            999999999999999875

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.5e-45  Score=369.00  Aligned_cols=256  Identities=21%  Similarity=0.281  Sum_probs=193.5

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  176 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV  176 (433)
                      .+|.+.+.||+|+||+||. ....+++.||||++....  ......|+.+++.+.    .|+||+++++++.+...+|||
T Consensus        24 ~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~--~~~~~~E~~~l~~l~----~HpnIv~l~~~~~~~~~~~lv   96 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPEC--FSFADREVQLLRESD----EHPNVIRYFCTEKDRQFQYIA   96 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTT--EEECHHHHHHHHHSC----CCTTBCCEEEEEEETTEEEEE
T ss_pred             EEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHH--HHHHHHHHHHHHhcc----CCCCcCeEEEEEecCCEEEEE
Confidence            4699999999999999764 344678899999986422  223457888888762    578999999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCccc
Q 013973          177 FEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  256 (433)
Q Consensus       177 ~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~  256 (433)
                      |||++++|.+++.... ..+++..+..++.||+.||+|||++|||||||||+|||++.++.                   
T Consensus        97 ~E~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~-------------------  156 (432)
T 3p23_A           97 IELCAATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNA-------------------  156 (432)
T ss_dssp             EECCSEEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBT-------------------
T ss_pred             EECCCCCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCC-------------------
Confidence            9999889999998764 34566677899999999999999999999999999999954321                   


Q ss_pred             ccCCCCCCEEEEecCCccccCCC------CCceeecCcccchhhhh---CCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 013973          257 KRMPKSSAIKVIDFGSTTYERPD------QNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCT-GEALFQTH  326 (433)
Q Consensus       257 ~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~  326 (433)
                         +....+||+|||++......      ....+||+.|+|||++.   ...++.++|||||||++|||++ |..||...
T Consensus       157 ---~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~  233 (432)
T 3p23_A          157 ---HGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKS  233 (432)
T ss_dssp             ---TTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBST
T ss_pred             ---CCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchh
Confidence               23446788888888654432      12357999999999998   4567889999999999999999 99999654


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      ........    .+.                   .......                       .....+..+.+||.+|
T Consensus       234 ~~~~~~~~----~~~-------------------~~~~~~~-----------------------~~~~~~~~~~~li~~~  267 (432)
T 3p23_A          234 LQRQANIL----LGA-------------------CSLDCLH-----------------------PEKHEDVIARELIEKM  267 (432)
T ss_dssp             TTHHHHHH----TTC-------------------CCCTTSC-----------------------TTCHHHHHHHHHHHHH
T ss_pred             hHHHHHHH----hcc-------------------CCccccC-----------------------ccccccHHHHHHHHHH
Confidence            43322110    000                   0000000                       0012345688999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      |+.||.+|||+.|+++||||..
T Consensus       268 L~~dP~~Rps~~evl~hp~f~~  289 (432)
T 3p23_A          268 IAMDPQKRPSAKHVLKHPFFWS  289 (432)
T ss_dssp             SCSSGGGSCCHHHHHTSTTTCC
T ss_pred             HhCCHhhCCCHHHHHhCccccC
Confidence            9999999999999999999975

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=6.7e-45  Score=348.70  Aligned_cols=248  Identities=20%  Similarity=0.340  Sum_probs=199.0

Q ss_pred             cCcEEEEeeeeccccEEEEEEEE-----CCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWD-----RERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~-----~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      .++|++.+.||+|+||.||+|.+     +.+++.||+|+++..  ....+.+..|+.+++.+     .|+||+++++++.
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~   96 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV-----NHPHVIKLYGACS   96 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEEC
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhC-----CCCceeeEEEEEe
Confidence            47899999999999999999988     345689999999743  23445677888888877     6799999999999


Q ss_pred             cCCeEEEEEecC-CCCHHHHHHhcCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 013973          169 YRNHICIVFEKL-GSSLYDFLRKNNY----------------------RSFPIDLVREIARQLLECIAFMHDLCMIHTDL  225 (433)
Q Consensus       169 ~~~~~~lV~e~~-~~~L~~~l~~~~~----------------------~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDl  225 (433)
                      ..+.+++||||+ +++|.+++.....                      ..+++..+..++.||+.||.|||++||+||||
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~di  176 (314)
T 2ivs_A           97 QDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDL  176 (314)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             cCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCccccc
Confidence            999999999999 8999999987542                      24899999999999999999999999999999


Q ss_pred             CCCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCC
Q 013973          226 KPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGW  300 (433)
Q Consensus       226 Kp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~  300 (433)
                      ||+|||++.++.                           +||+|||++.......     ....||+.|+|||++.+..+
T Consensus       177 kp~NIli~~~~~---------------------------~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  229 (314)
T 2ivs_A          177 AARNILVAEGRK---------------------------MKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIY  229 (314)
T ss_dssp             SGGGEEEETTTE---------------------------EEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEE
T ss_pred             chheEEEcCCCC---------------------------EEEccccccccccccccceeccCCCCcccccChhhhcCCCc
Confidence            999999965554                           5555555554332221     22357889999999999899


Q ss_pred             CCcchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhc
Q 013973          301 TYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVM  379 (433)
Q Consensus       301 ~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (433)
                      +.++|||||||++|+|++ |..||.+....+....+..                       +..                
T Consensus       230 ~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-----------------------~~~----------------  270 (314)
T 2ivs_A          230 TTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKT-----------------------GHR----------------  270 (314)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT-----------------------TCC----------------
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhc-----------------------CCc----------------
Confidence            999999999999999999 9999987655443322111                       000                


Q ss_pred             cchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          380 KLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                               ...+..++.++.+||.+||+.||++|||+.|++++
T Consensus       271 ---------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          271 ---------MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             ---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                     01123567789999999999999999999999875

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1.5e-44  Score=338.20  Aligned_cols=246  Identities=26%  Similarity=0.382  Sum_probs=201.6

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      .++|++.+.||+|+||.||+|.+. +++.||+|++.......+.+..|+.+++.+     .|+||+++++++...+.+++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~l   80 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKL-----SHPKLVQLYGVCLEQAPICL   80 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBCHHHHHHHHHHHHTC-----CCTTBCCEEEEECSSSSCEE
T ss_pred             hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCCHHHHHHHHHHHHhC-----CCCCEeeEEEEEccCCCeEE
Confidence            367999999999999999999986 567899999986555567788899999888     67899999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      ||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++                  
T Consensus        81 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~------------------  141 (267)
T 3t9t_A           81 VTEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQ------------------  141 (267)
T ss_dssp             EECCCTTCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGG------------------
T ss_pred             EEeCCCCCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCC------------------
Confidence            99999 889999998753 4689999999999999999999999999999999999995544                  


Q ss_pred             ccccCCCCCCEEEEecCCccccCCC----CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPD----QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  329 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~  329 (433)
                               .+||+|||.+......    .....||..|+|||++.+..++.++||||||+++|+|++ |..||...+..
T Consensus       142 ---------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~  212 (267)
T 3t9t_A          142 ---------VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS  212 (267)
T ss_dssp             ---------CEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH
T ss_pred             ---------CEEEcccccccccccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH
Confidence                     5666666666543221    122357889999999999999999999999999999999 89999887665


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +....+.....                      .                          ..+...+.++.+||.+||+.
T Consensus       213 ~~~~~i~~~~~----------------------~--------------------------~~~~~~~~~l~~li~~~l~~  244 (267)
T 3t9t_A          213 EVVEDISTGFR----------------------L--------------------------YKPRLASTHVYQIMNHCWRE  244 (267)
T ss_dssp             HHHHHHHTTCC----------------------C--------------------------CCCTTSCHHHHHHHHHHTCS
T ss_pred             HHHHHHhcCCc----------------------C--------------------------CCCccCcHHHHHHHHHHccC
Confidence            54433221100                      0                          01124567899999999999


Q ss_pred             CCCCCCCHHHHhcC
Q 013973          410 DPTDRLTAREALRH  423 (433)
Q Consensus       410 dP~~R~ta~ell~h  423 (433)
                      ||++|||+.|++++
T Consensus       245 ~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          245 RPEDRPAFSRLLRQ  258 (267)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999999864

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=7.3e-45  Score=351.23  Aligned_cols=246  Identities=21%  Similarity=0.279  Sum_probs=190.6

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEE----EEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMV----AIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~v----AiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      .++|++++.||+|+||.||+|++..+++.+    |+|.++..  ......+..|+.+++++     .|+||+++++++..
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~   88 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-----DNPHVCRLLGICLT   88 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHC-----CBTTBCCEEEEEES
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhC-----CCCCEeEEEEEEec
Confidence            367999999999999999999998887654    77776532  23446678899999988     67899999999987


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      .. .++||||+ +|+|.+++.... ..+++..+..++.||+.||+|||++|||||||||+|||++.++.           
T Consensus        89 ~~-~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~-----------  155 (327)
T 3poz_A           89 ST-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH-----------  155 (327)
T ss_dssp             SS-EEEEEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTE-----------
T ss_pred             CC-eEEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCC-----------
Confidence            65 77888888 999999998754 46999999999999999999999999999999999999966554           


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEAL  322 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P  322 (433)
                                      +||+|||+++......     ....||+.|+|||++.+..++.++|||||||++|||++ |..|
T Consensus       156 ----------------~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p  219 (327)
T 3poz_A          156 ----------------VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP  219 (327)
T ss_dssp             ----------------EEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             ----------------EEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCC
Confidence                            5556666554332221     12356889999999999999999999999999999999 9999


Q ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       323 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      |.+.+..+....+....                      ...                          .+...+.++.+|
T Consensus       220 ~~~~~~~~~~~~~~~~~----------------------~~~--------------------------~~~~~~~~~~~l  251 (327)
T 3poz_A          220 YDGIPASEISSILEKGE----------------------RLP--------------------------QPPICTIDVYMI  251 (327)
T ss_dssp             TTTCCGGGHHHHHHTTC----------------------CCC--------------------------CCTTBCHHHHHH
T ss_pred             ccCCCHHHHHHHHHcCC----------------------CCC--------------------------CCccCCHHHHHH
Confidence            98766544332221100                      000                          123466789999


Q ss_pred             HHhccccCCCCCCCHHHHhcC
Q 013973          403 LQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       403 i~~~L~~dP~~R~ta~ell~h  423 (433)
                      +.+||+.||.+|||+.|++++
T Consensus       252 i~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          252 MVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HHHHTCSCGGGSCCHHHHHHH
T ss_pred             HHHHcCCChhhCCCHHHHHHH
Confidence            999999999999999999865

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=1.4e-44  Score=364.69  Aligned_cols=248  Identities=25%  Similarity=0.372  Sum_probs=202.6

Q ss_pred             ceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           93 ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        93 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      +...++|++.+.||+|+||.||+|.+.. +..||||+++......+.+..|+.+++.+     .|+||+++++++. ...
T Consensus       184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~l~~~~~-~~~  256 (454)
T 1qcf_A          184 EIPRESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPGSMSVEAFLAEANVMKTL-----QHDKLVKLHAVVT-KEP  256 (454)
T ss_dssp             BCCGGGEEEEEEEECCSSEEEEEEEETT-TEEEEEEEECTTSBCHHHHHHHHHHHTTC-----CCTTBCCEEEEEC-SSS
T ss_pred             eechHHeEEEEEcccCCceEEEEEEECC-ccEEEEEEecCCCccHHHHHHHHHHHhhC-----CCCCEeeEEEEEe-CCc
Confidence            3445789999999999999999999864 67799999986555667788999999888     6789999999886 667


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +|+||||+ +|+|.+++.......+++..+..++.||+.||+|||++|||||||||+|||++.                 
T Consensus       257 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~-----------------  319 (454)
T 1qcf_A          257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA-----------------  319 (454)
T ss_dssp             CEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECT-----------------
T ss_pred             cEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECC-----------------
Confidence            89999999 899999998654346899999999999999999999999999999999999954                 


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCC----CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH  326 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~  326 (433)
                                ++.+||+|||+++.....    .....+|..|+|||++....++.++|||||||++|||++ |..||.+.
T Consensus       320 ----------~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~  389 (454)
T 1qcf_A          320 ----------SLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM  389 (454)
T ss_dssp             ----------TCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             ----------CCcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCC
Confidence                      455677777766544321    122346788999999999999999999999999999999 99999987


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      +..+....+.....                      .                          ..+..++.++.+||.+|
T Consensus       390 ~~~~~~~~i~~~~~----------------------~--------------------------~~~~~~~~~l~~li~~c  421 (454)
T 1qcf_A          390 SNPEVIRALERGYR----------------------M--------------------------PRPENCPEELYNIMMRC  421 (454)
T ss_dssp             CHHHHHHHHHHTCC----------------------C--------------------------CCCTTSCHHHHHHHHHH
T ss_pred             CHHHHHHHHHcCCC----------------------C--------------------------CCCCCCCHHHHHHHHHH
Confidence            76665544322100                      0                          01235677899999999


Q ss_pred             cccCCCCCCCHHHHhc
Q 013973          407 LRYDPTDRLTAREALR  422 (433)
Q Consensus       407 L~~dP~~R~ta~ell~  422 (433)
                      |+.||++|||+.+|++
T Consensus       422 l~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          422 WKNRPEERPTFEYIQS  437 (454)
T ss_dssp             TCSSGGGSCCHHHHHH
T ss_pred             ccCChhHCcCHHHHHH
Confidence            9999999999998865

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=5.6e-46  Score=368.52  Aligned_cols=279  Identities=20%  Similarity=0.325  Sum_probs=205.4

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC-
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN-  171 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~-  171 (433)
                      ..++|++.+.||+|+||.||+|.+..+++.||||+++...  ...+.+..|+++++.+     .|+||+++++++...+ 
T Consensus         7 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~~~~~~~~~~~   81 (396)
T 4eut_A            7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-----NHKNIVKLFAIEEETTT   81 (396)
T ss_dssp             SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-----CCTTBCCEEEEEECTTT
T ss_pred             CCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhc-----CCCCCCeEEEeeccCCC
Confidence            3567999999999999999999999999999999997432  2345667899999998     6789999999987654 


Q ss_pred             -eEEEEEecC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          172 -HICIVFEKL-GSSLYDFLRKNNY-RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       172 -~~~lV~e~~-~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                       ..|+||||+ +++|.+++..... ..+++..+..++.||+.||+|||++|||||||||+|||+....            
T Consensus        82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~------------  149 (396)
T 4eut_A           82 RHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGE------------  149 (396)
T ss_dssp             CCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECT------------
T ss_pred             CeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecC------------
Confidence             889999999 8999999976432 2399999999999999999999999999999999999983221            


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhC--------CCCCCcchhHHHHHHHHHHHh
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILG--------LGWTYPCDIWSVGCILVELCT  318 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~--------~~~~~~~DvwSlGv~l~ellt  318 (433)
                                 +.++.+||+|||.+.......  ...+||+.|+|||++.+        ..++.++|||||||++|||++
T Consensus       150 -----------~~~~~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~t  218 (396)
T 4eut_A          150 -----------DGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAAT  218 (396)
T ss_dssp             -----------TSCEEEEECCGGGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCceeEEEecCCCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHH
Confidence                       334567888888876544332  23579999999999875        467889999999999999999


Q ss_pred             CCCCCCCCCh-HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchh
Q 013973          319 GEALFQTHEN-LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG  397 (433)
Q Consensus       319 g~~Pf~~~~~-~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  397 (433)
                      |..||..... ......+.......|...+..+     .....+.+.|........                .....++.
T Consensus       219 g~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~----------------~l~~~~~~  277 (396)
T 4eut_A          219 GSLPFRPFEGPRRNKEVMYKIITGKPSGAISGV-----QKAENGPIDWSGDMPVSC----------------SLSRGLQV  277 (396)
T ss_dssp             SSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEE-----ECSTTCCEEEESSCCTTC----------------SSCHHHHH
T ss_pred             CCCCCCCCCcccchHHHHHHHhcCCCcccchhh-----eeccCCCcccCccCCccc----------------ccchHHHh
Confidence            9999975332 1112222222222222111100     001122222322211110                11124566


Q ss_pred             HHHHHHHhccccCCCCCCCHHHHhc
Q 013973          398 DLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       398 ~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                      .+.+||.+||+.||++|||+.|+++
T Consensus       278 ~l~~ll~~~L~~dP~~R~s~~e~l~  302 (396)
T 4eut_A          278 LLTPVLANILEADQEKCWGFDQFFA  302 (396)
T ss_dssp             HHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred             hchHHHHHhhccChhhhccHHHHHH
Confidence            7899999999999999999999864

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=1.4e-44  Score=343.71  Aligned_cols=269  Identities=22%  Similarity=0.302  Sum_probs=196.3

Q ss_pred             ecCcEEEEeeeeccccEEEEEEE----ECCCCeEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECW----DRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~----~~~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      ..++|++++.||+|+||.||+|+    +..+++.||||++... ....+.+..|+.+++.+     .|+||+++++++..
T Consensus         8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~   82 (295)
T 3ugc_A            8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-----QHDNIVKYKGVCYS   82 (295)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEECH
T ss_pred             CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEec
Confidence            35789999999999999999998    6678999999998743 33446678899999888     67899999998754


Q ss_pred             --CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCC
Q 013973          170 --RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  246 (433)
Q Consensus       170 --~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~  246 (433)
                        ...+++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++
T Consensus        83 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~  161 (295)
T 3ugc_A           83 AGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT  161 (295)
T ss_dssp             HHHTSCEEEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSC
T ss_pred             CCCCceEEEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCccc
Confidence              46799999999 899999998754 35999999999999999999999999999999999999977666555555544


Q ss_pred             CCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          247 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                      .........                     ........||..|+|||++.+..++.++||||||+++|||++|..||...
T Consensus       162 ~~~~~~~~~---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~  220 (295)
T 3ugc_A          162 KVLPQDKEF---------------------FKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP  220 (295)
T ss_dssp             C----------------------------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSH
T ss_pred             ccccCCcce---------------------eeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCC
Confidence            332211000                     00011124678899999999999999999999999999999999999753


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      ...     .....+..+..... ..............                          ..+..++.++.+||.+|
T Consensus       221 ~~~-----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--------------------------~~~~~~~~~l~~li~~~  268 (295)
T 3ugc_A          221 PAE-----FMRMIGNDKQGQMI-VFHLIELLKNNGRL--------------------------PRPDGCPDEIYMIMTEC  268 (295)
T ss_dssp             HHH-----HHHHHCTTCCTHHH-HHHHHHHHHTTCCC--------------------------CCCTTCCHHHHHHHHHH
T ss_pred             hHH-----HHhhhcCccccchh-HHHHHHHHhccCcC--------------------------CCCcCcCHHHHHHHHHH
Confidence            211     11111111110000 00000000011111                          12346778999999999


Q ss_pred             cccCCCCCCCHHHHhc
Q 013973          407 LRYDPTDRLTAREALR  422 (433)
Q Consensus       407 L~~dP~~R~ta~ell~  422 (433)
                      |+.||++|||+.|+++
T Consensus       269 l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          269 WNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             SCSSGGGSCCHHHHHH
T ss_pred             cCCChhhCCCHHHHHH
Confidence            9999999999999975

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=2.3e-44  Score=345.57  Aligned_cols=254  Identities=24%  Similarity=0.368  Sum_probs=181.8

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhh--HHHHHHHHH-HHHHHHhcCCCCCceEEecceeecCCe
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKY--REAAMIEIE-VLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~E~~-~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      .++|++++.||+|+||.||+|.++.+++.||||++......  ......|.. +++.+     .|+||+++++++...+.
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~-----~h~~i~~~~~~~~~~~~   98 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSH-----DCPYIVQCFGTFITNTD   98 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTT-----TCTTBCCEEEEEECSSE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhc-----CCCceeeEEEEEecCCc
Confidence            36799999999999999999999999999999999743221  222222332 23322     67899999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL-CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +++||||+++.+..++... ...+++..+..++.||+.||.|||++ ||+||||||+|||++.                 
T Consensus        99 ~~lv~e~~~~~~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~-----------------  160 (318)
T 2dyl_A           99 VFIAMELMGTCAEKLKKRM-QGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDE-----------------  160 (318)
T ss_dssp             EEEEECCCSEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECT-----------------
T ss_pred             EEEEEeccCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECC-----------------
Confidence            9999999976666665543 24799999999999999999999995 9999999999999954                 


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhh-----CCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                                ++.+||+|||.+.......  ....||+.|+|||++.     ...++.++|||||||++|+|++|..||.
T Consensus       161 ----------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  230 (318)
T 2dyl_A          161 ----------RGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYK  230 (318)
T ss_dssp             ----------TSCEEECCCTTC--------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             ----------CCCEEEEECCCchhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCC
Confidence                      4456666666664332221  2347899999999994     4568899999999999999999999998


Q ss_pred             CCC-hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          325 THE-NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       325 ~~~-~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      ... ..+....+.....                      ...+                        ....++.++.+||
T Consensus       231 ~~~~~~~~~~~~~~~~~----------------------~~~~------------------------~~~~~~~~l~~li  264 (318)
T 2dyl_A          231 NCKTDFEVLTKVLQEEP----------------------PLLP------------------------GHMGFSGDFQSFV  264 (318)
T ss_dssp             TCCSHHHHHHHHHHSCC----------------------CCCC------------------------SSSCCCHHHHHHH
T ss_pred             CCCccHHHHHHHhccCC----------------------CCCC------------------------ccCCCCHHHHHHH
Confidence            643 3333222211100                      0000                        0124677899999


Q ss_pred             HhccccCCCCCCCHHHHhcCCCCCC
Q 013973          404 QGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      .+||+.||.+|||+.|+++||||++
T Consensus       265 ~~~l~~dp~~Rps~~~ll~h~~~~~  289 (318)
T 2dyl_A          265 KDCLTKDHRKRPKYNKLLEHSFIKR  289 (318)
T ss_dssp             HHHTCSCTTTSCCHHHHTTSHHHHH
T ss_pred             HHHccCChhHCcCHHHHhhCHHHHh
Confidence            9999999999999999999999964

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=3.8e-44  Score=343.31  Aligned_cols=250  Identities=23%  Similarity=0.340  Sum_probs=199.3

Q ss_pred             cCcEEEEeeeeccccEEEEEEEE-----CCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWD-----RERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~-----~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      .++|++.+.||+|+||.||+|.+     ..+++.||+|+++...  ...+.+..|+.+++++.    .|+||+++++++.
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----~h~~i~~~~~~~~   97 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG----NHMNIVNLLGACT   97 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC----CCTTBCCEEEEEC
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcc----cCCCeeeEEEEEe
Confidence            46899999999999999999985     4677899999997432  34566788999999883    4688999999999


Q ss_pred             cCCeEEEEEecC-CCCHHHHHHhcCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceE
Q 013973          169 YRNHICIVFEKL-GSSLYDFLRKNNY----------------RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVL  231 (433)
Q Consensus       169 ~~~~~~lV~e~~-~~~L~~~l~~~~~----------------~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NIL  231 (433)
                      ..+..++||||+ +++|.+++.....                ..+++..+..++.||+.||.|||++||+||||||+|||
T Consensus        98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil  177 (313)
T 1t46_A           98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNIL  177 (313)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEE
Confidence            999999999999 8899999987542                24899999999999999999999999999999999999


Q ss_pred             eeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchh
Q 013973          232 LVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDI  306 (433)
Q Consensus       232 l~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Dv  306 (433)
                      ++.++.++|+||                           |.+.......     ....||+.|+|||++.+..++.++||
T Consensus       178 ~~~~~~~kl~Df---------------------------g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  230 (313)
T 1t46_A          178 LTHGRITKICDF---------------------------GLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDV  230 (313)
T ss_dssp             EETTTEEEECCC---------------------------GGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHH
T ss_pred             EcCCCCEEEccc---------------------------cccccccccccceeccCCCCcceeeChHHhcCCCCChHHHH
Confidence            976555555555                           4444332221     12357889999999999999999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHH
Q 013973          307 WSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ  385 (433)
Q Consensus       307 wSlGv~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (433)
                      ||||+++|+|++ |..||.+.........+......                                            
T Consensus       231 ~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~--------------------------------------------  266 (313)
T 1t46_A          231 WSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR--------------------------------------------  266 (313)
T ss_dssp             HHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCC--------------------------------------------
T ss_pred             HHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCC--------------------------------------------
Confidence            999999999999 99999876543332221111000                                            


Q ss_pred             HHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          386 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       386 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                         ...+...+.++.+||.+||+.||.+|||+.|++++
T Consensus       267 ---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          267 ---MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             ---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---CCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence               00123456789999999999999999999999874

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.4e-44  Score=349.62  Aligned_cols=250  Identities=21%  Similarity=0.310  Sum_probs=197.0

Q ss_pred             cCcEEEEeeeeccccEEEEEEEE-----CCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWD-----RERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~-----~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      .++|++.+.||+|+||.||+|.+     ..+++.||+|+++..  ....+.+..|+.+++++.    .|+||+++++++.
T Consensus        44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----~hp~iv~~~~~~~  119 (344)
T 1rjb_A           44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLG----SHENIVNLLGACT  119 (344)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHC----CCTTBCCEEEEEC
T ss_pred             HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhc----CCCCeeeEEEEEe
Confidence            47899999999999999999997     346678999999743  234466788999999883    4688999999999


Q ss_pred             cCCeEEEEEecC-CCCHHHHHHhcCC---------------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q 013973          169 YRNHICIVFEKL-GSSLYDFLRKNNY---------------------RSFPIDLVREIARQLLECIAFMHDLCMIHTDLK  226 (433)
Q Consensus       169 ~~~~~~lV~e~~-~~~L~~~l~~~~~---------------------~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlK  226 (433)
                      ..+.+++||||+ +++|.+++.....                     ..+++..+..++.||+.||+|||++||+|||||
T Consensus       120 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dik  199 (344)
T 1rjb_A          120 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLA  199 (344)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCS
T ss_pred             eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence            999999999999 8899999986542                     238999999999999999999999999999999


Q ss_pred             CCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCC
Q 013973          227 PENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWT  301 (433)
Q Consensus       227 p~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~  301 (433)
                      |+|||++.++.                           +||+|||++.......     ....||+.|+|||++.+..++
T Consensus       200 p~NIll~~~~~---------------------------~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  252 (344)
T 1rjb_A          200 ARNVLVTHGKV---------------------------VKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYT  252 (344)
T ss_dssp             GGGEEEETTTE---------------------------EEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCC
T ss_pred             hhhEEEcCCCc---------------------------EEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCC
Confidence            99999965554                           5555555554332221     224678899999999999999


Q ss_pred             CcchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhcc
Q 013973          302 YPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK  380 (433)
Q Consensus       302 ~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  380 (433)
                      .++|||||||++|+|++ |..||.+......+..+..                      .+. .                
T Consensus       253 ~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~----------------------~~~-~----------------  293 (344)
T 1rjb_A          253 IKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQ----------------------NGF-K----------------  293 (344)
T ss_dssp             HHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH----------------------TTC-C----------------
T ss_pred             hhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHh----------------------cCC-C----------------
Confidence            99999999999999998 9999987654333222111                      000 0                


Q ss_pred             chhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          381 LPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                              ...+...+.++.+||.+||+.||.+|||+.|+++|
T Consensus       294 --------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  328 (344)
T 1rjb_A          294 --------MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  328 (344)
T ss_dssp             --------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence                    00123457789999999999999999999999886

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=2.4e-44  Score=364.30  Aligned_cols=258  Identities=19%  Similarity=0.285  Sum_probs=199.2

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      .+.++|+++++||+|+||.||+|.+..+++.||||++.... ....+..|+.+++.+.++    +++..+..++......
T Consensus         4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~il~~L~~~----~~i~~i~~~~~~~~~~   78 (483)
T 3sv0_A            4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLLYESKIYRILQGG----TGIPNVRWFGVEGDYN   78 (483)
T ss_dssp             EETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC-SSCCHHHHHHHHHHTTTS----TTCCCEEEEEEETTEE
T ss_pred             CcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc-ccHHHHHHHHHHHHhcCC----CCCCeEEEEEeeCCEE
Confidence            45688999999999999999999999999999999987432 234577899999888543    4455666667788899


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       174 ~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +|||||++++|.+++.... ..+++..++.|+.||+.||+|||++|||||||||+||||+.+                  
T Consensus        79 ~lvme~~g~sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~------------------  139 (483)
T 3sv0_A           79 VLVMDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG------------------  139 (483)
T ss_dssp             EEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCG------------------
T ss_pred             EEEEECCCCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecC------------------
Confidence            9999999999999998643 479999999999999999999999999999999999999311                  


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCC----------CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQ----------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF  323 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf  323 (433)
                            +.++.+||+|||++.......          ...+||+.|+|||++.+..++.++|||||||++|||++|..||
T Consensus       140 ------~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf  213 (483)
T 3sv0_A          140 ------RRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPW  213 (483)
T ss_dssp             ------GGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ------CCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCC
Confidence                  123456666666665433221          2457999999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      .+.........+.....                                         ..+..........++.++.+||
T Consensus       214 ~~~~~~~~~~~~~~i~~-----------------------------------------~~~~~~~~~l~~~~p~~l~~li  252 (483)
T 3sv0_A          214 QGLKAGTKKQKYEKISE-----------------------------------------KKVATSIEALCRGYPTEFASYF  252 (483)
T ss_dssp             SSCCCSSHHHHHHHHHH-----------------------------------------HHHHSCHHHHHTTSCHHHHHHH
T ss_pred             ccccchhHHHHHHHHhh-----------------------------------------ccccccHHHHhcCCcHHHHHHH
Confidence            87543221111111000                                         0000111122346678999999


Q ss_pred             HhccccCCCCCCCHHHHhc
Q 013973          404 QGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~  422 (433)
                      ..||+.||++||++.+|++
T Consensus       253 ~~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          253 HYCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             HHHHTCCTTCCCCHHHHHH
T ss_pred             HHHhcCChhhCcCHHHHHH
Confidence            9999999999999987764

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=8.4e-45  Score=353.40  Aligned_cols=255  Identities=16%  Similarity=0.239  Sum_probs=188.3

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECC---CCeEEEEEEeecchhh------------HHHHHHHHHHHHHHHhcCCCCCce
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRE---RKEMVAIKIVRGIKKY------------REAAMIEIEVLQQLAKHDKGGNRC  160 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~---~~~~vAiK~~~~~~~~------------~~~~~~E~~~l~~l~~~~~~~~~i  160 (433)
                      .++|++.+.||+|+||.||+|.+..   ++..||+|++......            ...+..|+..+..+     .|+||
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-----~h~ni  110 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQL-----DYLGI  110 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTC-----SCCCC
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccc-----cccCc
Confidence            3679999999999999999999987   7888999998743211            01122333333333     77999


Q ss_pred             EEecceeec----CCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccC
Q 013973          161 VQIRNWFDY----RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSE  236 (433)
Q Consensus       161 ~~~~~~~~~----~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~  236 (433)
                      +++++++..    ...+|+||||++++|.+++...+  .+++..+..++.||+.||+|||++|||||||||+|||++.++
T Consensus       111 ~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~  188 (345)
T 2v62_A          111 PLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKN  188 (345)
T ss_dssp             CCEEEEEEEESSSCEEEEEEEECEEEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSS
T ss_pred             ceeecccccccCCCcEEEEEEeccCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCC
Confidence            999999877    78999999999999999998765  799999999999999999999999999999999999996543


Q ss_pred             ccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC----------CCceeecCcccchhhhhCCCCCCcchh
Q 013973          237 YIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----------QNYIVSTRHYRAPEVILGLGWTYPCDI  306 (433)
Q Consensus       237 ~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~Dv  306 (433)
                                               .+.+||+|||++......          .....||+.|+|||++.+..++.++||
T Consensus       189 -------------------------~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di  243 (345)
T 2v62_A          189 -------------------------PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDV  243 (345)
T ss_dssp             -------------------------TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHH
T ss_pred             -------------------------CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhH
Confidence                                     125666677766433211          123479999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCC--ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhH
Q 013973          307 WSVGCILVELCTGEALFQTH--ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRL  384 (433)
Q Consensus       307 wSlGv~l~elltg~~Pf~~~--~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  384 (433)
                      |||||++|||++|..||.+.  +...............|......                                   
T Consensus       244 ~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------  288 (345)
T 2v62_A          244 EILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKW-----------------------------------  288 (345)
T ss_dssp             HHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHH-----------------------------------
T ss_pred             HHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhh-----------------------------------
Confidence            99999999999999999642  22222222222222222211110                                   


Q ss_pred             HHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhc
Q 013973          385 QNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       385 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                           .....++.++.+||.+||+.||++|||+.++++
T Consensus       289 -----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          289 -----APSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             -----SCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             -----ccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence                 001256789999999999999999999998876

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=1.3e-44  Score=341.66  Aligned_cols=248  Identities=24%  Similarity=0.306  Sum_probs=191.1

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCC---CeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRER---KEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~---~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      ...++|++.+.||+|+||.||+|.+..+   +..||+|+++..  ....+.+..|+.+++.+     .|+||+++++++.
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~   86 (281)
T 1mp8_A           12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-----DHPHIVKLIGVIT   86 (281)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEEC
T ss_pred             EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhC-----CCCccceEEEEEc
Confidence            3457899999999999999999998654   467999998642  33455677888888877     6789999999885


Q ss_pred             cCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC
Q 013973          169 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       169 ~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                       .+..|+||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||   
T Consensus        87 -~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg---  161 (281)
T 1mp8_A           87 -ENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG---  161 (281)
T ss_dssp             -SSSCEEEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred             -cCccEEEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccc---
Confidence             56789999999 789999998653 469999999999999999999999999999999999999766655555554   


Q ss_pred             CCCCCCcccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCC
Q 013973          248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEAL  322 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P  322 (433)
                                              ++.......    ....+|+.|+|||++.+..++.++|||||||++|||++ |..|
T Consensus       162 ------------------------~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p  217 (281)
T 1mp8_A          162 ------------------------LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP  217 (281)
T ss_dssp             -----------------------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             ------------------------cccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCC
Confidence                                    443322211    12356789999999999999999999999999999997 9999


Q ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       323 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      |.+....+....+...                      ...                          ..+..++.++.+|
T Consensus       218 f~~~~~~~~~~~i~~~----------------------~~~--------------------------~~~~~~~~~l~~l  249 (281)
T 1mp8_A          218 FQGVKNNDVIGRIENG----------------------ERL--------------------------PMPPNCPPTLYSL  249 (281)
T ss_dssp             TTTCCGGGHHHHHHTT----------------------CCC--------------------------CCCTTCCHHHHHH
T ss_pred             CCcCCHHHHHHHHHcC----------------------CCC--------------------------CCCCCCCHHHHHH
Confidence            9876655443322110                      000                          1123567789999


Q ss_pred             HHhccccCCCCCCCHHHHhcC
Q 013973          403 LQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       403 i~~~L~~dP~~R~ta~ell~h  423 (433)
                      |.+||+.||++|||+.|++++
T Consensus       250 i~~~l~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          250 MTKCWAYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHccCChhhCcCHHHHHHH
Confidence            999999999999999999864

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=5.6e-45  Score=351.67  Aligned_cols=246  Identities=23%  Similarity=0.275  Sum_probs=192.4

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeE----EEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEM----VAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~----vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      .++|++++.||+|+||.||+|.+..+++.    ||+|.+....  .....+..|+.+++.+     .|+||+++++++. 
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~-   85 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL-----DHAHIVRLLGLCP-   85 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTC-----CCTTBCCEEEEEC-
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcC-----CCCCcCeEEEEEc-
Confidence            36799999999999999999999888876    6777764321  2223456688888777     6799999999886 


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      .+..++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++|||||||||+|||++.+             
T Consensus        86 ~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~-------------  151 (325)
T 3kex_A           86 GSSLQLVTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSP-------------  151 (325)
T ss_dssp             BSSEEEEEECCTTCBSHHHHHSSG-GGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSS-------------
T ss_pred             CCccEEEEEeCCCCCHHHHHHHcc-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCC-------------
Confidence            56789999999 899999997652 469999999999999999999999999999999999999544             


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEAL  322 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P  322 (433)
                                    +.+||+|||++.......     ....||..|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus       152 --------------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p  217 (325)
T 3kex_A          152 --------------SQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP  217 (325)
T ss_dssp             --------------SCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             --------------CeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCC
Confidence                          456666666665433221     23467889999999999999999999999999999999 9999


Q ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       323 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      |.+....+....+...                      ....                          .+..++.++.+|
T Consensus       218 ~~~~~~~~~~~~~~~~----------------------~~~~--------------------------~~~~~~~~~~~l  249 (325)
T 3kex_A          218 YAGLRLAEVPDLLEKG----------------------ERLA--------------------------QPQICTIDVYMV  249 (325)
T ss_dssp             TTTSCTTHHHHHHHTT----------------------CBCC--------------------------CCTTBCTTTTHH
T ss_pred             ccccCHHHHHHHHHcC----------------------CCCC--------------------------CCCcCcHHHHHH
Confidence            9876654433322110                      0000                          122456678899


Q ss_pred             HHhccccCCCCCCCHHHHhcC
Q 013973          403 LQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       403 i~~~L~~dP~~R~ta~ell~h  423 (433)
                      |.+||+.||.+|||+.|+++|
T Consensus       250 i~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          250 MVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             HHHHTCSCTTTSCCHHHHHHH
T ss_pred             HHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999999875

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=1.7e-44  Score=348.44  Aligned_cols=259  Identities=22%  Similarity=0.343  Sum_probs=178.3

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      .++|++++.||+|+||.||+|.++.+++.||||+++...  ........|+..+.    ....|+||+++++++...+..
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~----~~~~h~niv~~~~~~~~~~~~   96 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVM----RSSDCPYIVQFYGALFREGDC   96 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHH----SSCCCTTBCCEEEEEECSSEE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHH----HcCCCCcEeeeeeEEEeCCce
Confidence            367999999999999999999999999999999997532  22233344444222    123779999999999999999


Q ss_pred             EEEEecCCCCHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          174 CIVFEKLGSSLYDFLRK---NNYRSFPIDLVREIARQLLECIAFMHDL-CMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       174 ~lV~e~~~~~L~~~l~~---~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      ++||||+.++|.+++..   .....+++..+..++.|++.||.|||+. ||+||||||+|||++.++.            
T Consensus        97 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~------------  164 (327)
T 3aln_A           97 WICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGN------------  164 (327)
T ss_dssp             EEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTE------------
T ss_pred             EEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCC------------
Confidence            99999997798888763   2235799999999999999999999999 9999999999999965554            


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhh----hCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVI----LGLGWTYPCDIWSVGCILVELCTGEALF  323 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~----~~~~~~~~~DvwSlGv~l~elltg~~Pf  323 (433)
                                     +||+|||++.......  ....||+.|+|||++    .+..++.++|||||||++|+|++|..||
T Consensus       165 ---------------~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf  229 (327)
T 3aln_A          165 ---------------IKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPY  229 (327)
T ss_dssp             ---------------EEECCCSSSCC------------------------------CCSHHHHHHHHHHHHHHHHSCCCS
T ss_pred             ---------------EEEccCCCceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence                           5555555554332221  223689999999999    4567899999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      ........  .+                   ...........+.                      .....++.++.+||
T Consensus       230 ~~~~~~~~--~~-------------------~~~~~~~~~~~~~----------------------~~~~~~~~~l~~li  266 (327)
T 3aln_A          230 PKWNSVFD--QL-------------------TQVVKGDPPQLSN----------------------SEEREFSPSFINFV  266 (327)
T ss_dssp             SCC----------------------------CCCCCSCCCCCCC----------------------CSSCCCCHHHHHHH
T ss_pred             CCcchHHH--HH-------------------HHHhcCCCCCCCC----------------------cccccCCHHHHHHH
Confidence            76432110  00                   0000000000000                      01235677899999


Q ss_pred             HhccccCCCCCCCHHHHhcCCCCCC
Q 013973          404 QGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      .+||+.||++|||+.|+++||||..
T Consensus       267 ~~~l~~dp~~Rps~~ell~hp~~~~  291 (327)
T 3aln_A          267 NLCLTKDESKRPKYKELLKHPFILM  291 (327)
T ss_dssp             HHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             HHHhhCChhhCcCHHHHHhChHHHH
Confidence            9999999999999999999999964

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=4e-44  Score=335.70  Aligned_cols=244  Identities=15%  Similarity=0.141  Sum_probs=197.3

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC--
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR--  170 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~--  170 (433)
                      .++|++.+.||+|+||.||+|.+.  ++.||+|+++..   ....+.+..|+.+++++     .|+||+++++++.+.  
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~   81 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIF-----SHPNVLPVLGACQSPPA   81 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCC-----SCTTEECEEEEECTTTS
T ss_pred             HHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhc-----CCCchhheEEEEccCCC
Confidence            467999999999999999999984  788999999743   23345567788777766     679999999999877  


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCceEeeccCccccCCCcCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC--MIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                      +.+++||||+ +++|.+++.......+++..+..++.||+.||.|||++|  |+||||||+|||++              
T Consensus        82 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~--------------  147 (271)
T 3kmu_A           82 PHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMID--------------  147 (271)
T ss_dssp             SSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEEC--------------
T ss_pred             CCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEc--------------
Confidence            8899999999 889999998766556999999999999999999999999  99999999999994              


Q ss_pred             CCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCC---cchhHHHHHHHHHHHhCCCCCC
Q 013973          248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTY---PCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwSlGv~l~elltg~~Pf~  324 (433)
                                   .++.++|+|||++.....  ....||+.|+|||++.+..++.   ++|||||||++|||++|..||.
T Consensus       148 -------------~~~~~~l~~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~  212 (271)
T 3kmu_A          148 -------------EDMTARISMADVKFSFQS--PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFA  212 (271)
T ss_dssp             -------------TTSCEEEEGGGSCCTTSC--TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTT
T ss_pred             -------------CCcceeEEeccceeeecc--cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence                         445567777666543222  2347899999999999866554   7999999999999999999998


Q ss_pred             CCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHH
Q 013973          325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  404 (433)
Q Consensus       325 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  404 (433)
                      +.+..+....+.....                     ..                          ..+..++.++.+||.
T Consensus       213 ~~~~~~~~~~~~~~~~---------------------~~--------------------------~~~~~~~~~~~~li~  245 (271)
T 3kmu_A          213 DLSNMEIGMKVALEGL---------------------RP--------------------------TIPPGISPHVSKLMK  245 (271)
T ss_dssp             TSCHHHHHHHHHHSCC---------------------CC--------------------------CCCTTCCHHHHHHHH
T ss_pred             ccChHHHHHHHHhcCC---------------------CC--------------------------CCCCCCCHHHHHHHH
Confidence            8776554333211100                     00                          112356778999999


Q ss_pred             hccccCCCCCCCHHHHhc
Q 013973          405 GLLRYDPTDRLTAREALR  422 (433)
Q Consensus       405 ~~L~~dP~~R~ta~ell~  422 (433)
                      +||+.||++|||+.|+++
T Consensus       246 ~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          246 ICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             HHTCSSGGGSCCHHHHHH
T ss_pred             HHcCCChhhCcCHHHHHH
Confidence            999999999999999986

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=9.6e-45  Score=363.78  Aligned_cols=270  Identities=25%  Similarity=0.307  Sum_probs=197.4

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      .+.+.|.+.+.||+|+||+||.+. ..+|+.||||++...  ..+....|+.+++++.    .||||+++++.+.+.+.+
T Consensus        12 ~l~~~~~~~~~LG~G~~g~V~~~~-~~~g~~vAvK~~~~~--~~~~~~~E~~~l~~l~----~HpnIv~~~~~~~~~~~~   84 (434)
T 2rio_A           12 SLKNLVVSEKILGYGSSGTVVFQG-SFQGRPVAVKRMLID--FCDIALMEIKLLTESD----DHPNVIRYYCSETTDRFL   84 (434)
T ss_dssp             SCSSCEEEEEEEEECSTTCEEEEE-ESSSSEEEEEEEEGG--GHHHHHHHHHHHHHHT----TSTTBCCEEEEEECSSEE
T ss_pred             hhhheeeccCeEeeCCCeEEEEEE-EECCeEEEEEEEcHH--HHHHHHHHHHHHHhcc----CCCCcCeEEEEEecCCeE
Confidence            345668888999999999998754 457899999998643  3345678999888763    568899999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCC-----CCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          174 CIVFEKLGSSLYDFLRKNNYRS-----FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       174 ~lV~e~~~~~L~~~l~~~~~~~-----l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      ||||||++++|.+++.......     .++..+..++.||+.||+|||++|||||||||+|||++.++.......     
T Consensus        85 ~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~-----  159 (434)
T 2rio_A           85 YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQ-----  159 (434)
T ss_dssp             EEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCT-----
T ss_pred             EEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccc-----
Confidence            9999999889999998654211     123345789999999999999999999999999999976543221100     


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCC-------CceeecCcccchhhhhC-------CCCCCcchhHHHHHHHH
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-------NYIVSTRHYRAPEVILG-------LGWTYPCDIWSVGCILV  314 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGv~l~  314 (433)
                               ..+.+..+||+|||++.......       ...+||+.|+|||++.+       ..++.++|||||||++|
T Consensus       160 ---------~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~  230 (434)
T 2rio_A          160 ---------TGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY  230 (434)
T ss_dssp             ---------TCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHH
T ss_pred             ---------cCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHH
Confidence                     00345678999999887654432       23479999999999976       56899999999999999


Q ss_pred             HHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcC
Q 013973          315 ELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD  393 (433)
Q Consensus       315 ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (433)
                      ||++ |..||......+.  .+..                       +....+....                   ....
T Consensus       231 ellt~g~~Pf~~~~~~~~--~i~~-----------------------~~~~~~~~~~-------------------~~~~  266 (434)
T 2rio_A          231 YILSKGKHPFGDKYSRES--NIIR-----------------------GIFSLDEMKC-------------------LHDR  266 (434)
T ss_dssp             HHHTTSCCTTCSTTTHHH--HHHH-----------------------TCCCCCCCTT-------------------CCCH
T ss_pred             HHHhCCCCCCCCchhhHH--HHhc-----------------------CCCCcccccc-------------------cccc
Confidence            9999 9999976543321  1111                       1111111000                   0011


Q ss_pred             CchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          394 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       394 ~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      .++.++.+||.+||+.||.+|||+.|+++||||..
T Consensus       267 ~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~  301 (434)
T 2rio_A          267 SLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP  301 (434)
T ss_dssp             HHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred             cchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence            24568999999999999999999999999999975

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=2.4e-44  Score=346.33  Aligned_cols=252  Identities=22%  Similarity=0.331  Sum_probs=202.1

Q ss_pred             CceecCcEEEEeeeeccccEEEEEEEEC-----CCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEec
Q 013973           92 GENLTSRYKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIR  164 (433)
Q Consensus        92 ~~~~~~~~~~~~~iG~G~~g~V~~~~~~-----~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~  164 (433)
                      .+...++|++.+.||+|+||.||+|.+.     .+++.||+|++....  .....+..|+.+++.+     .|+||++++
T Consensus        20 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~   94 (322)
T 1p4o_A           20 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-----NCHHVVRLL   94 (322)
T ss_dssp             TBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGC-----CCTTBCCEE
T ss_pred             hcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhc-----CCCCEeeeE
Confidence            3445678999999999999999999876     457889999997432  3344567788888877     678999999


Q ss_pred             ceeecCCeEEEEEecC-CCCHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeecc
Q 013973          165 NWFDYRNHICIVFEKL-GSSLYDFLRKNN--------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSS  235 (433)
Q Consensus       165 ~~~~~~~~~~lV~e~~-~~~L~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~  235 (433)
                      +++...+..++||||+ +++|.+++....        ...+++..+..++.||+.||.|||++||+||||||+|||++. 
T Consensus        95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~-  173 (322)
T 1p4o_A           95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE-  173 (322)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECT-
T ss_pred             EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcC-
Confidence            9999999999999999 889999997532        135799999999999999999999999999999999999954 


Q ss_pred             CccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHH
Q 013973          236 EYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVG  310 (433)
Q Consensus       236 ~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG  310 (433)
                                                ++.+||+|||++.......     ....||+.|+|||++.+..++.++||||||
T Consensus       174 --------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  227 (322)
T 1p4o_A          174 --------------------------DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG  227 (322)
T ss_dssp             --------------------------TCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             --------------------------CCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHH
Confidence                                      4456666666665332221     223678999999999999999999999999


Q ss_pred             HHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHh
Q 013973          311 CILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM  389 (433)
Q Consensus       311 v~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (433)
                      |++|+|++ |..||.+.+..+....+..                       +..                         .
T Consensus       228 ~il~el~~~g~~p~~~~~~~~~~~~~~~-----------------------~~~-------------------------~  259 (322)
T 1p4o_A          228 VVLWEIATLAEQPYQGLSNEQVLRFVME-----------------------GGL-------------------------L  259 (322)
T ss_dssp             HHHHHHHHTSCCTTTTSCHHHHHHHHHT-----------------------TCC-------------------------C
T ss_pred             HHHHHHHhcCCCccccCCHHHHHHHHHc-----------------------CCc-------------------------C
Confidence            99999999 8999988766554433211                       000                         0


Q ss_pred             hhcCCchhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          390 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       390 ~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                      ..+..++.++.+||.+||+.||.+|||+.|+++|
T Consensus       260 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          260 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            0123567789999999999999999999999987

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=4.7e-44  Score=343.09  Aligned_cols=250  Identities=22%  Similarity=0.314  Sum_probs=196.8

Q ss_pred             cCcEEEEeeeeccccEEEEEEEE-----CCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWD-----RERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~-----~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      .++|++.+.||+|+||.||+|.+     ..+++.||||+++..  ......+..|+.+++.+.    +|+||+++++++.
T Consensus        26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----~hp~iv~~~~~~~  101 (316)
T 2xir_A           26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG----HHLNVVNLLGACT  101 (316)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC----CCTTBCCEEEEEC
T ss_pred             hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcc----cCCCeeeEEEEEe
Confidence            47899999999999999999984     457789999999743  233456778999998883    4688999999987


Q ss_pred             cC-CeEEEEEecC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEe
Q 013973          169 YR-NHICIVFEKL-GSSLYDFLRKNNY--------------RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLL  232 (433)
Q Consensus       169 ~~-~~~~lV~e~~-~~~L~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl  232 (433)
                      .. ..+++||||+ +++|.+++.....              ..+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus       102 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~  181 (316)
T 2xir_A          102 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL  181 (316)
T ss_dssp             CTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred             cCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEE
Confidence            64 4599999999 8899999987542              128999999999999999999999999999999999999


Q ss_pred             eccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhH
Q 013973          233 VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIW  307 (433)
Q Consensus       233 ~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Dvw  307 (433)
                      +.++.                           +||+|||++.......     ....||+.|+|||++.+..++.++|||
T Consensus       182 ~~~~~---------------------------~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~  234 (316)
T 2xir_A          182 SEKNV---------------------------VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW  234 (316)
T ss_dssp             CGGGC---------------------------EEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHH
T ss_pred             CCCCC---------------------------EEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHH
Confidence            65554                           5555555554332221     224688999999999999999999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHH
Q 013973          308 SVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN  386 (433)
Q Consensus       308 SlGv~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  386 (433)
                      ||||++|+|++ |..||.+....+.+........                     ..                       
T Consensus       235 slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~---------------------~~-----------------------  270 (316)
T 2xir_A          235 SFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT---------------------RM-----------------------  270 (316)
T ss_dssp             HHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTC---------------------CC-----------------------
T ss_pred             HHHHHHHHHHhCCCCCCcccchhHHHHHHhccCc---------------------cC-----------------------
Confidence            99999999998 9999987654332221111000                     00                       


Q ss_pred             HHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          387 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       387 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                         ..+...++++.++|.+||+.||.+|||+.|+++|
T Consensus       271 ---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          271 ---RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             ---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence               0123456789999999999999999999999976

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3.9e-44  Score=343.36  Aligned_cols=247  Identities=23%  Similarity=0.334  Sum_probs=190.2

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++....    ...+.+..|+.+++.+     .|+||+++++++...+
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~hp~iv~~~~~~~~~~  107 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRL-----QEPHVVPIHDFGEIDG  107 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEEEETT
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhc-----CCCCeeEEEEEEeeCC
Confidence            367999999999999999999999999999999986432    2235567788888777     6789999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+|+||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++              
T Consensus       108 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~--------------  171 (309)
T 2h34_A          108 QLYVDMRLINGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADD--------------  171 (309)
T ss_dssp             EEEEEEECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS--------------
T ss_pred             eEEEEEEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCC--------------
Confidence            999999999 789999998764  799999999999999999999999999999999999995544              


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                                   .+||+|||++.......    ....||+.|+|||++.+..++.++||||||+++|+|++|..||.+.
T Consensus       172 -------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  238 (309)
T 2h34_A          172 -------------FAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGD  238 (309)
T ss_dssp             -------------CEEECSCCC----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSC
T ss_pred             -------------CEEEecCccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCc
Confidence                         55666666554332221    2346899999999999989999999999999999999999999875


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      +.......+.   ...+                     .                      ....+..++.++.+||.+|
T Consensus       239 ~~~~~~~~~~---~~~~---------------------~----------------------~~~~~~~~~~~l~~li~~~  272 (309)
T 2h34_A          239 QLSVMGAHIN---QAIP---------------------R----------------------PSTVRPGIPVAFDAVIARG  272 (309)
T ss_dssp             HHHHHHHHHH---SCCC---------------------C----------------------GGGTSTTCCTHHHHHHHHH
T ss_pred             hHHHHHHHhc---cCCC---------------------C----------------------ccccCCCCCHHHHHHHHHh
Confidence            5432211110   0000                     0                      0012345677899999999


Q ss_pred             cccCCCCCC-CHHHHhc
Q 013973          407 LRYDPTDRL-TAREALR  422 (433)
Q Consensus       407 L~~dP~~R~-ta~ell~  422 (433)
                      |+.||++|| +++++++
T Consensus       273 l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          273 MAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             TCSSGGGSCSSHHHHHH
T ss_pred             ccCCHHHHHHhHHHHHH
Confidence            999999999 8887764

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=3.7e-44  Score=337.96  Aligned_cols=247  Identities=26%  Similarity=0.374  Sum_probs=199.4

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      ...++|++++.||+|+||.||+|.+. ++..||+|+++......+.+..|+.+++.+     .|+||+++++++. .+..
T Consensus        10 v~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~-~~~~   82 (279)
T 1qpc_A           10 VPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQL-----QHQRLVRLYAVVT-QEPI   82 (279)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHC-----CCTTBCCEEEEEC-SSSC
T ss_pred             cCHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcccHHHHHHHHHHHHhC-----CCcCcceEEEEEc-CCCc
Confidence            34578999999999999999999975 567799999976555567788999999998     6788999999886 4568


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      ++||||+ +++|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.                  
T Consensus        83 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~------------------  144 (279)
T 1qpc_A           83 YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD------------------  144 (279)
T ss_dssp             EEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT------------------
T ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcC------------------
Confidence            9999999 899999997543336999999999999999999999999999999999999954                  


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCC
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE  327 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~  327 (433)
                               ++.+||+|||.+.......    ....||..|+|||++.+..++.++||||||+++|||++ |..||.+.+
T Consensus       145 ---------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~  215 (279)
T 1qpc_A          145 ---------TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT  215 (279)
T ss_dssp             ---------TSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred             ---------CCCEEECCCcccccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccC
Confidence                     4456666666665433221    22356889999999998889999999999999999999 999998876


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ..+....+....                      ..                          ..+..++.++.+||.+||
T Consensus       216 ~~~~~~~~~~~~----------------------~~--------------------------~~~~~~~~~l~~li~~~l  247 (279)
T 1qpc_A          216 NPEVIQNLERGY----------------------RM--------------------------VRPDNCPEELYQLMRLCW  247 (279)
T ss_dssp             HHHHHHHHHTTC----------------------CC--------------------------CCCTTCCHHHHHHHHHHT
T ss_pred             HHHHHHHHhccc----------------------CC--------------------------CCcccccHHHHHHHHHHh
Confidence            655443321100                      00                          012356778999999999


Q ss_pred             ccCCCCCCCHHHHhc
Q 013973          408 RYDPTDRLTAREALR  422 (433)
Q Consensus       408 ~~dP~~R~ta~ell~  422 (433)
                      +.||++|||+.++++
T Consensus       248 ~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          248 KERPEDRPTFDYLRS  262 (279)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             ccChhhCCCHHHHHH
Confidence            999999999999875

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=1.8e-44  Score=343.67  Aligned_cols=252  Identities=21%  Similarity=0.282  Sum_probs=188.0

Q ss_pred             ceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec---
Q 013973           93 ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY---  169 (433)
Q Consensus        93 ~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~---  169 (433)
                      ..+.++|++.+.||+|+||+||+|.+  +++.||||++...  .......|.+++....   ..|+||+++++.+..   
T Consensus         4 ~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~e~~~~~~~~---l~h~niv~~~~~~~~~~~   76 (301)
T 3q4u_A            4 RTVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR--DEKSWFRETELYNTVM---LRHENILGFIASDMTSRH   76 (301)
T ss_dssp             CCCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG--GHHHHHHHHHHHHHTC---CCCTTBCCEEEEEEEEET
T ss_pred             ccccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc--cchhhHHHHHHHHHhh---ccCcCeeeEEEeeccccC
Confidence            44568899999999999999999987  6889999998743  3344566777766632   267899999988543   


Q ss_pred             -CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH--------HCCceeccCCCCceEeeccCccc
Q 013973          170 -RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH--------DLCMIHTDLKPENVLLVSSEYIK  239 (433)
Q Consensus       170 -~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH--------~~~ivHrDlKp~NILl~~~~~~~  239 (433)
                       ...+++||||+ +++|.++++..   .+++..+..++.||+.||+|||        +.|||||||||+|||++.+    
T Consensus        77 ~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~----  149 (301)
T 3q4u_A           77 SSTQLWLITHYHEMGSLYDYLQLT---TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN----  149 (301)
T ss_dssp             TEEEEEEEECCCTTCBHHHHHTTC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTT----
T ss_pred             CCceeEEehhhccCCCHHHHHhhc---ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCC----
Confidence             46799999999 88999999643   6999999999999999999999        9999999999999999544    


Q ss_pred             cCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-------CceeecCcccchhhhhCC------CCCCcchh
Q 013973          240 VPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-------NYIVSTRHYRAPEVILGL------GWTYPCDI  306 (433)
Q Consensus       240 i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~gt~~y~aPE~~~~~------~~~~~~Dv  306 (433)
                                             +.+||+|||++.......       ...+||+.|+|||++.+.      .++.++||
T Consensus       150 -----------------------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv  206 (301)
T 3q4u_A          150 -----------------------GQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDI  206 (301)
T ss_dssp             -----------------------SCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHH
T ss_pred             -----------------------CCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhH
Confidence                                   456666666654332221       223799999999999876      45579999


Q ss_pred             HHHHHHHHHHHhC----------CCCCCCCCh----HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccch
Q 013973          307 WSVGCILVELCTG----------EALFQTHEN----LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASR  372 (433)
Q Consensus       307 wSlGv~l~elltg----------~~Pf~~~~~----~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  372 (433)
                      |||||++|||++|          ..||.....    ..........                    .......+.     
T Consensus       207 wslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~-----  261 (301)
T 3q4u_A          207 WAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCV--------------------DQQRPNIPN-----  261 (301)
T ss_dssp             HHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTT--------------------SCCCCCCCG-----
T ss_pred             HHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhc--------------------cCCCCCCCh-----
Confidence            9999999999999          888864321    1111111000                    000000000     


Q ss_pred             hhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhc
Q 013973          373 ESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                                      ....+..+.++.+||.+||+.||++|||+.|+++
T Consensus       262 ----------------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          262 ----------------RWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             ----------------GGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             ----------------hhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence                            0011235678999999999999999999999986

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=1.3e-44  Score=355.81  Aligned_cols=246  Identities=23%  Similarity=0.333  Sum_probs=190.6

Q ss_pred             cCcEEEEeeeeccccEEEEEEEEC---CCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDR---ERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~---~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      .++|++.+.||+|+||.||+|+++   .++..||||+++..  ....+.+..|+.+++++     .|+||+++++++...
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~  118 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-----DHPNIIRLEGVVTKS  118 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEECSS
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEeeC
Confidence            467999999999999999999887   45678999998743  34456678899998887     678999999999999


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      +.+++||||+ +++|.+++...+ ..+++..+..++.||+.||+|||++||+||||||+|||++.++             
T Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~-------------  184 (373)
T 2qol_A          119 KPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNL-------------  184 (373)
T ss_dssp             SSCEEEEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC-------------
T ss_pred             CceEEEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCC-------------
Confidence            9999999999 899999998653 4699999999999999999999999999999999999995544             


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCC------CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEAL  322 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P  322 (433)
                                    .+||+|||++.......      ....+|..|+|||++.+..++.++|||||||++|||++ |..|
T Consensus       185 --------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P  250 (373)
T 2qol_A          185 --------------VCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP  250 (373)
T ss_dssp             --------------CEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CT
T ss_pred             --------------CEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCC
Confidence                          45555555554332221      11235778999999999999999999999999999998 9999


Q ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       323 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      |...+..+....+....                      ..                          ..+..++.++.+|
T Consensus       251 ~~~~~~~~~~~~i~~~~----------------------~~--------------------------~~~~~~~~~l~~l  282 (373)
T 2qol_A          251 YWEMSNQDVIKAVDEGY----------------------RL--------------------------PPPMDCPAALYQL  282 (373)
T ss_dssp             TTTCCHHHHHHHHHTTE----------------------EC--------------------------CCCTTCBHHHHHH
T ss_pred             CCCCCHHHHHHHHHcCC----------------------CC--------------------------CCCccccHHHHHH
Confidence            98776655443321110                      00                          0122456789999


Q ss_pred             HHhccccCCCCCCCHHHHhc
Q 013973          403 LQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       403 i~~~L~~dP~~R~ta~ell~  422 (433)
                      |.+||+.||.+||++.|+++
T Consensus       283 i~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          283 MLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             HHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHhCcChhhCcCHHHHHH
Confidence            99999999999999998875

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=7.7e-45  Score=343.07  Aligned_cols=249  Identities=26%  Similarity=0.327  Sum_probs=199.8

Q ss_pred             CceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec--
Q 013973           92 GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY--  169 (433)
Q Consensus        92 ~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~--  169 (433)
                      +..+.++|++++.||+|+||.||+|.+..+++.||+|+++...   +.+..|+.+++.+     .|+||+++++++..  
T Consensus         6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~   77 (284)
T 2a19_B            6 DKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKL-----DHVNIVHYNGCWDGFD   77 (284)
T ss_dssp             CHHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHC-----CCTTBCCEEEEEEEEE
T ss_pred             cchhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhC-----CCCCEEEEeeeEeccc
Confidence            3455678999999999999999999999999999999997543   3456789999888     67899999988754  


Q ss_pred             --------------CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeec
Q 013973          170 --------------RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVS  234 (433)
Q Consensus       170 --------------~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~  234 (433)
                                    ...+++||||+ +++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~  157 (284)
T 2a19_B           78 YDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVD  157 (284)
T ss_dssp             EC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE
T ss_pred             cCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcC
Confidence                          45689999999 789999998765457999999999999999999999999999999999999965


Q ss_pred             cCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC--CCceeecCcccchhhhhCCCCCCcchhHHHHHH
Q 013973          235 SEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCI  312 (433)
Q Consensus       235 ~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~  312 (433)
                      ++.                           +||+|||.+......  .....||+.|+|||++.+..++.++||||||++
T Consensus       158 ~~~---------------------------~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  210 (284)
T 2a19_B          158 TKQ---------------------------VKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLI  210 (284)
T ss_dssp             TTE---------------------------EEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHH
T ss_pred             CCC---------------------------EEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHH
Confidence            554                           555556655433322  123468999999999999999999999999999


Q ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhc
Q 013973          313 LVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV  392 (433)
Q Consensus       313 l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (433)
                      +|+|++|..||...  ......                       +..+                            ..+
T Consensus       211 l~~l~~~~~~~~~~--~~~~~~-----------------------~~~~----------------------------~~~  237 (284)
T 2a19_B          211 LAELLHVCDTAFET--SKFFTD-----------------------LRDG----------------------------IIS  237 (284)
T ss_dssp             HHHHHSCCSSHHHH--HHHHHH-----------------------HHTT----------------------------CCC
T ss_pred             HHHHHhcCCcchhH--HHHHHH-----------------------hhcc----------------------------ccc
Confidence            99999999887421  000000                       0000                            012


Q ss_pred             CCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          393 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       393 ~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      ..++.++.+||.+||+.||.+|||+.|+++|.+.-.
T Consensus       238 ~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~  273 (284)
T 2a19_B          238 DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK  273 (284)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred             ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence            345678999999999999999999999999977543

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=2.8e-44  Score=347.51  Aligned_cols=260  Identities=25%  Similarity=0.357  Sum_probs=180.4

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCCceEEeccee--------
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF--------  167 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~--------  167 (433)
                      .+|++.+.||+|+||.||+|.+..+++.||+|++... ......+..|+.+++++.    +|+||+++++++        
T Consensus        28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~----~h~~iv~~~~~~~~~~~~~~  103 (337)
T 3ll6_A           28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLS----GHPNIVQFCSAASIGKEESD  103 (337)
T ss_dssp             EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHT----TSTTBCCEEEEEEECTTTST
T ss_pred             ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhc----cCCChhhccccccccccccc
Confidence            5799999999999999999999999999999988533 334556778999998884    368899999887        


Q ss_pred             ecCCeEEEEEecCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCceEeeccCccccCCCc
Q 013973          168 DYRNHICIVFEKLGSSLYDFLRKN-NYRSFPIDLVREIARQLLECIAFMHDLC--MIHTDLKPENVLLVSSEYIKVPDYK  244 (433)
Q Consensus       168 ~~~~~~~lV~e~~~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlKp~NILl~~~~~~~i~dfg  244 (433)
                      .....+++||||++|+|.+++... ....+++..+..++.||+.||.|||+.|  |+||||||+|||++.++.++|+|||
T Consensus       104 ~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg  183 (337)
T 3ll6_A          104 TGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFG  183 (337)
T ss_dssp             TSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCT
T ss_pred             cCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCc
Confidence            445679999999999999998752 2346999999999999999999999999  9999999999999777776666666


Q ss_pred             CCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhh---hCCCCCCcchhHHHHHHHHHHHhCCC
Q 013973          245 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVI---LGLGWTYPCDIWSVGCILVELCTGEA  321 (433)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwSlGv~l~elltg~~  321 (433)
                      ++............            ..............||+.|+|||++   .+..++.++|||||||++|+|++|..
T Consensus       184 ~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~  251 (337)
T 3ll6_A          184 SATTISHYPDYSWS------------AQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQH  251 (337)
T ss_dssp             TCBCCSSCC-------------------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSC
T ss_pred             cceeccccCccccc------------ccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCC
Confidence            65544322110000            0000000111234689999999999   56678999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       322 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      ||..........                           +....+                        .....+..+.+
T Consensus       252 p~~~~~~~~~~~---------------------------~~~~~~------------------------~~~~~~~~~~~  280 (337)
T 3ll6_A          252 PFEDGAKLRIVN---------------------------GKYSIP------------------------PHDTQYTVFHS  280 (337)
T ss_dssp             CC---------------------------------------CCCC------------------------TTCCSSGGGHH
T ss_pred             CCcchhHHHhhc---------------------------CcccCC------------------------cccccchHHHH
Confidence            997543322110                           000111                        11244567889


Q ss_pred             HHHhccccCCCCCCCHHHHhcC
Q 013973          402 LLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       402 li~~~L~~dP~~R~ta~ell~h  423 (433)
                      ||.+||+.||.+|||+.|+++|
T Consensus       281 li~~~l~~~p~~Rps~~e~l~~  302 (337)
T 3ll6_A          281 LIRAMLQVNPEERLSIAEVVHQ  302 (337)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHHH
T ss_pred             HHHHHccCChhhCcCHHHHHHH
Confidence            9999999999999999999986

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=1.6e-44  Score=348.64  Aligned_cols=255  Identities=20%  Similarity=0.275  Sum_probs=203.1

Q ss_pred             ecCcEEEEeeeeccccEEEEEEE-----ECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEeccee
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECW-----DRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  167 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~-----~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~  167 (433)
                      ..++|++++.||+|+||.||+|.     +..+++.||||++...  ......+..|+.+++.+     .|+||+++++++
T Consensus        28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~  102 (327)
T 2yfx_A           28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-----NHQNIVRCIGVS  102 (327)
T ss_dssp             CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEE
T ss_pred             ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhC-----CCCCCCeEEEEE
Confidence            35789999999999999999998     5567889999998632  34455677899998888     678999999999


Q ss_pred             ecCCeEEEEEecC-CCCHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccC
Q 013973          168 DYRNHICIVFEKL-GSSLYDFLRKNNY-----RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVP  241 (433)
Q Consensus       168 ~~~~~~~lV~e~~-~~~L~~~l~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~  241 (433)
                      ......|+||||+ +++|.+++.....     ..+++..+..++.||+.||.|||++||+||||||+|||++.++     
T Consensus       103 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~-----  177 (327)
T 2yfx_A          103 LQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG-----  177 (327)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSS-----
T ss_pred             cCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCC-----
Confidence            9999999999999 8999999987542     3589999999999999999999999999999999999996432     


Q ss_pred             CCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHH
Q 013973          242 DYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVEL  316 (433)
Q Consensus       242 dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~el  316 (433)
                                         ....+||+|||++......     .....||+.|+|||++.+..++.++||||||+++|+|
T Consensus       178 -------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el  238 (327)
T 2yfx_A          178 -------------------PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI  238 (327)
T ss_dssp             -------------------TTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             -------------------CcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHH
Confidence                               3446888888877633221     1234678999999999999999999999999999999


Q ss_pred             Hh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCc
Q 013973          317 CT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS  395 (433)
Q Consensus       317 lt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (433)
                      ++ |..||......+....+....                      ..                          ..+..+
T Consensus       239 lt~g~~p~~~~~~~~~~~~~~~~~----------------------~~--------------------------~~~~~~  270 (327)
T 2yfx_A          239 FSLGYMPYPSKSNQEVLEFVTSGG----------------------RM--------------------------DPPKNC  270 (327)
T ss_dssp             HTTSCCSSTTCCHHHHHHHHHTTC----------------------CC--------------------------CCCTTC
T ss_pred             HcCCCCCCCCcCHHHHHHHHhcCC----------------------CC--------------------------CCCCCC
Confidence            98 999998776655443322110                      00                          012345


Q ss_pred             hhHHHHHHHhccccCCCCCCCHHHHhcCCCC
Q 013973          396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFF  426 (433)
Q Consensus       396 ~~~~~~li~~~L~~dP~~R~ta~ell~hp~f  426 (433)
                      +..+.+||.+||+.||.+|||+.|+++|.|+
T Consensus       271 ~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~  301 (327)
T 2yfx_A          271 PGPVYRIMTQCWQHQPEDRPNFAIILERIEY  301 (327)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence            6789999999999999999999999998765

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=1.2e-43  Score=343.68  Aligned_cols=249  Identities=18%  Similarity=0.304  Sum_probs=199.0

Q ss_pred             cCcEEEEeeeeccccEEEEEEEEC-------CCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecce
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDR-------ERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  166 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~-------~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~  166 (433)
                      .++|++.+.||+|+||.||+|.+.       .+++.||+|+++..  ......+..|+.+++.+.    .|+||++++++
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----~hp~iv~~~~~  109 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG----KHKNIINLLGA  109 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHC----CCTTBCCEEEE
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhh----cCCCEeeEEEE
Confidence            478999999999999999999976       45678999999743  234456778999998883    46889999999


Q ss_pred             eecCCeEEEEEecC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceE
Q 013973          167 FDYRNHICIVFEKL-GSSLYDFLRKNNY--------------RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVL  231 (433)
Q Consensus       167 ~~~~~~~~lV~e~~-~~~L~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NIL  231 (433)
                      +...+.+++||||+ +++|.+++.....              ..+++..+..++.||+.||.|||++||+||||||+|||
T Consensus       110 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIl  189 (334)
T 2pvf_A          110 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL  189 (334)
T ss_dssp             ECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred             EccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEE
Confidence            99999999999999 8899999986531              24899999999999999999999999999999999999


Q ss_pred             eeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchh
Q 013973          232 LVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDI  306 (433)
Q Consensus       232 l~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Dv  306 (433)
                      ++.+                           +.+||+|||++.......     ....||+.|+|||++.+..++.++||
T Consensus       190 l~~~---------------------------~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  242 (334)
T 2pvf_A          190 VTEN---------------------------NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV  242 (334)
T ss_dssp             ECTT---------------------------CCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHH
T ss_pred             EcCC---------------------------CCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHH
Confidence            9544                           456666666665433221     22357889999999999899999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHH
Q 013973          307 WSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ  385 (433)
Q Consensus       307 wSlGv~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (433)
                      ||||+++|+|++ |..||.+....+....+.....                      .                      
T Consensus       243 ~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~----------------------~----------------------  278 (334)
T 2pvf_A          243 WSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR----------------------M----------------------  278 (334)
T ss_dssp             HHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCC----------------------C----------------------
T ss_pred             HHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCC----------------------C----------------------
Confidence            999999999999 9999988766554433221100                      0                      


Q ss_pred             HHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          386 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       386 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                          ..+..++.++.+||.+||+.||.+|||+.|++++
T Consensus       279 ----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          279 ----DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                0123566789999999999999999999999864

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=1.1e-43  Score=339.93  Aligned_cols=251  Identities=25%  Similarity=0.377  Sum_probs=190.2

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeec----chhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG----IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      ...++|++.+.||+|+||.||+|.+..+++.||+|+++.    .......+..|+.+++.+     .|+||+++++++..
T Consensus        29 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~  103 (310)
T 2wqm_A           29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-----NHPNVIKYYASFIE  103 (310)
T ss_dssp             SSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEEEE
T ss_pred             ccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEEc
Confidence            345679999999999999999999999999999999863    233456677899988887     67899999999999


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  246 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~  246 (433)
                      .+.+++||||+ +++|.+++...  ....+++..+..++.||+.||.|||+.||+||||||+|||++.+           
T Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~-----------  172 (310)
T 2wqm_A          104 DNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITAT-----------  172 (310)
T ss_dssp             TTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT-----------
T ss_pred             CCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCC-----------
Confidence            99999999999 78999998742  23469999999999999999999999999999999999999544           


Q ss_pred             CCCCCCCcccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 013973          247 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF  323 (433)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf  323 (433)
                                      +.+||+|||++.......   ....||+.|+|||++.+..++.++||||||+++|+|++|..||
T Consensus       173 ----------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~  236 (310)
T 2wqm_A          173 ----------------GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF  236 (310)
T ss_dssp             ----------------SCEEECCC------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ----------------CCEEEEeccceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence                            456666666655433221   2346899999999999999999999999999999999999999


Q ss_pred             CCCChH--HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          324 QTHENL--EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       324 ~~~~~~--~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      .+....  +....+                       ..+.+  +.                      .....++.++.+
T Consensus       237 ~~~~~~~~~~~~~~-----------------------~~~~~--~~----------------------~~~~~~~~~l~~  269 (310)
T 2wqm_A          237 YGDKMNLYSLCKKI-----------------------EQCDY--PP----------------------LPSDHYSEELRQ  269 (310)
T ss_dssp             C---CCHHHHHHHH-----------------------HTTCS--CC----------------------CCTTTSCHHHHH
T ss_pred             cccchhHHHHHHHh-----------------------hcccC--CC----------------------CcccccCHHHHH
Confidence            754321  111111                       01100  00                      001245778999


Q ss_pred             HHHhccccCCCCCCCHHHHhcC
Q 013973          402 LLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       402 li~~~L~~dP~~R~ta~ell~h  423 (433)
                      ||.+||+.||.+|||+.+++++
T Consensus       270 li~~~l~~dp~~Rps~~~il~~  291 (310)
T 2wqm_A          270 LVNMCINPDPEKRPDVTYVYDV  291 (310)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHcCCChhhCCCHHHHHHH
Confidence            9999999999999999999863

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=3e-44  Score=362.05  Aligned_cols=253  Identities=26%  Similarity=0.351  Sum_probs=200.3

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      ...++|++.+.||+|+||.||+|.+..+ ..||||+++......+.+..|+.+++++     .|+||+++++++.. +.+
T Consensus       181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~-~~~  253 (452)
T 1fmk_A          181 IPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKL-----RHEKLVQLYAVVSE-EPI  253 (452)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSSCHHHHHHHHHHHHHC-----CCTTBCCEEEEECS-SSC
T ss_pred             cChhHceeeeeecCCCCeEEEEEEECCC-ceEEEEEeccCCCCHHHHHHHHHHHHhC-----CCCCEeeEEEEEcC-Cce
Confidence            3457899999999999999999998754 5699999986555566788999999998     67899999999876 678


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      |+||||+ +|+|.+++.......+++..+..++.||+.||+|||++|||||||||+|||++.++.               
T Consensus       254 ~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~---------------  318 (452)
T 1fmk_A          254 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV---------------  318 (452)
T ss_dssp             EEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC---------------
T ss_pred             EEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCC---------------
Confidence            9999999 899999997644346999999999999999999999999999999999999965554               


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCC
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHE  327 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~  327 (433)
                                  +||+|||++.......    ....+|..|+|||++.+..++.++|||||||++|||++ |..||.+..
T Consensus       319 ------------~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~  386 (452)
T 1fmk_A          319 ------------CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV  386 (452)
T ss_dssp             ------------EEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred             ------------EEECCCccceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCC
Confidence                        5555555554332211    12346788999999999999999999999999999999 999998877


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ..+....+....                      ..                          ..+..++.++.+||.+||
T Consensus       387 ~~~~~~~i~~~~----------------------~~--------------------------~~~~~~~~~l~~li~~cl  418 (452)
T 1fmk_A          387 NREVLDQVERGY----------------------RM--------------------------PCPPECPESLHDLMCQCW  418 (452)
T ss_dssp             HHHHHHHHHTTC----------------------CC--------------------------CCCTTSCHHHHHHHHHHT
T ss_pred             HHHHHHHHHcCC----------------------CC--------------------------CCCCCCCHHHHHHHHHHc
Confidence            665544322110                      00                          012356778999999999


Q ss_pred             ccCCCCCCCHHHHhcC--CCCCC
Q 013973          408 RYDPTDRLTAREALRH--PFFTR  428 (433)
Q Consensus       408 ~~dP~~R~ta~ell~h--p~f~~  428 (433)
                      +.||++|||++++++.  .+++.
T Consensus       419 ~~dP~~Rpt~~~l~~~L~~~~~~  441 (452)
T 1fmk_A          419 RKEPEERPTFEYLQAFLEDYFTS  441 (452)
T ss_dssp             CSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             cCChhhCcCHHHHHHHHHHHhcc
Confidence            9999999999998873  55543

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=8e-44  Score=340.90  Aligned_cols=244  Identities=25%  Similarity=0.373  Sum_probs=188.6

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  176 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV  176 (433)
                      ++|++.+.||+|+||.||+|.+.  ++.||+|++.. ....+.+..|+.+++++     .|+||+++++++.+  ..++|
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~-~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~--~~~lv   77 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIES-ESERKAFIVELRQLSRV-----NHPNIVKLYGACLN--PVCLV   77 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSS-TTHHHHHHHHHHHHHHC-----CCTTBCCEEEBCTT--TTEEE
T ss_pred             hHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecC-hhHHHHHHHHHHHHhcC-----CCCCcCeEEEEEcC--CcEEE
Confidence            57999999999999999999874  68899999974 34456778899999988     67899999998874  47999


Q ss_pred             EecC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          177 FEKL-GSSLYDFLRKNNY-RSFPIDLVREIARQLLECIAFMHD---LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       177 ~e~~-~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      |||+ +++|.+++..... ..+++..+..++.||+.||+|||+   +|||||||||+|||++.++.              
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~--------------  143 (307)
T 2eva_A           78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGT--------------  143 (307)
T ss_dssp             EECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTT--------------
T ss_pred             EEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCC--------------
Confidence            9999 8999999986542 247899999999999999999999   89999999999999964432              


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                                  .+||+|||++...........||+.|+|||++.+..++.++||||||+++|||++|..||........
T Consensus       144 ------------~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~  211 (307)
T 2eva_A          144 ------------VLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF  211 (307)
T ss_dssp             ------------EEEECCCCC------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH
T ss_pred             ------------EEEEcccccccccccccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH
Confidence                        25777777766544444445799999999999999999999999999999999999999975433221


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      ........+..                                              ......++..+.+||.+||+.||
T Consensus       212 ~~~~~~~~~~~----------------------------------------------~~~~~~~~~~l~~li~~~l~~dp  245 (307)
T 2eva_A          212 RIMWAVHNGTR----------------------------------------------PPLIKNLPKPIESLMTRCWSKDP  245 (307)
T ss_dssp             HHHHHHHTTCC----------------------------------------------CCCBTTCCHHHHHHHHHHTCSSG
T ss_pred             HHHHHHhcCCC----------------------------------------------CCcccccCHHHHHHHHHHhcCCh
Confidence            11100000000                                              01123567789999999999999


Q ss_pred             CCCCCHHHHhc
Q 013973          412 TDRLTAREALR  422 (433)
Q Consensus       412 ~~R~ta~ell~  422 (433)
                      ++|||+.|+++
T Consensus       246 ~~Rps~~ell~  256 (307)
T 2eva_A          246 SQRPSMEEIVK  256 (307)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hhCcCHHHHHH
Confidence            99999999987

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=4.2e-44  Score=349.40  Aligned_cols=260  Identities=14%  Similarity=0.156  Sum_probs=189.9

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCC--------CeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEE------
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRER--------KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQ------  162 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~--------~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~------  162 (433)
                      ++|++.+.||+|+||.||+|.+..+        ++.||+|++...    +.+..|+.+++++     .|+|+++      
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l-----~h~niv~~~~~~~  112 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRA-----AKPLQVNKWKKLY  112 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHH-----CCHHHHHHHHHHT
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHh-----cccchhhhhhhhc
Confidence            6899999999999999999999874        788999998744    3467789999888     3455554      


Q ss_pred             ---------ecceeec-CCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEe
Q 013973          163 ---------IRNWFDY-RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLL  232 (433)
Q Consensus       163 ---------~~~~~~~-~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl  232 (433)
                               +++++.. .+..|+||||++++|.+++.......+++..+..++.||+.||.|||++|||||||||+|||+
T Consensus       113 ~~~~~~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~  192 (352)
T 2jii_A          113 STPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFV  192 (352)
T ss_dssp             TCTTCSCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEE
T ss_pred             cCCccCccchhhccccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEE
Confidence                     5666654 788999999999999999987634579999999999999999999999999999999999999


Q ss_pred             eccC--ccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHH
Q 013973          233 VSSE--YIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVG  310 (433)
Q Consensus       233 ~~~~--~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlG  310 (433)
                      +.++  .++|+|||++..........                 ...........||+.|+|||++.+..++.++||||||
T Consensus       193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~-----------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG  255 (352)
T 2jii_A          193 DPEDQSQVTLAGYGFAFRYCPSGKHV-----------------AYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLG  255 (352)
T ss_dssp             ETTEEEEEEECCGGGCBCSSGGGCCC-----------------CCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHH
T ss_pred             cCCCCceEEEecCcceeeccCCCccc-----------------cccccccccccCCccccCHHHHccCCCCchhhHHHHH
Confidence            7655  44444444443221110000                 0000011234799999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCC-hHHHH-HHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHH
Q 013973          311 CILVELCTGEALFQTHE-NLEHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI  388 (433)
Q Consensus       311 v~l~elltg~~Pf~~~~-~~~~~-~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (433)
                      |++|||++|..||.... ..+.. ..........+                    ..+..                    
T Consensus       256 ~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~--------------------  295 (352)
T 2jii_A          256 YCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPG--------------------PFVGP--------------------  295 (352)
T ss_dssp             HHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCC--------------------CEECT--------------------
T ss_pred             HHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChh--------------------hhhhh--------------------
Confidence            99999999999998653 22222 21111111000                    00000                    


Q ss_pred             hhhcCCchhHHHHHHHhccccCCCCCCCHHHHhc
Q 013973          389 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       389 ~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                      ...+..++.++.+||.+||+.||++|||+.++++
T Consensus       296 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          296 CGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             TSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             ccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence            0001245788999999999999999999999875

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=6e-44  Score=338.60  Aligned_cols=251  Identities=24%  Similarity=0.343  Sum_probs=187.9

Q ss_pred             CceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           92 GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        92 ~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      ++...++|++.+.||+|+||.||+|.+..   .||+|+++..   ....+.+..|+.+++.+     .|+||+.++++. 
T Consensus        19 ~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~-   89 (289)
T 3og7_A           19 WEIPDGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-----RHVNILLFMGYS-   89 (289)
T ss_dssp             CBCCTTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEE-
T ss_pred             CccCccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhC-----CCCcEEEEEeec-
Confidence            44556789999999999999999998643   4999998632   33445677888888877     678999999854 


Q ss_pred             cCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC
Q 013973          169 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       169 ~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                      .....++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.          
T Consensus        90 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~----------  158 (289)
T 3og7_A           90 TAPQLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNT----------  158 (289)
T ss_dssp             CSSSCEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTE----------
T ss_pred             cCCccEEEEEecCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCC----------
Confidence            566789999999 899999997543 46999999999999999999999999999999999999966555          


Q ss_pred             CCCCCCcccccCCCCCCEEEEecCCccccCC-----CCCceeecCcccchhhhh---CCCCCCcchhHHHHHHHHHHHhC
Q 013973          248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERP-----DQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVELCTG  319 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGv~l~elltg  319 (433)
                                       +||+|||++.....     ......||+.|+|||++.   +..++.++||||||+++|+|++|
T Consensus       159 -----------------~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g  221 (289)
T 3og7_A          159 -----------------VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG  221 (289)
T ss_dssp             -----------------EEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHS
T ss_pred             -----------------EEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHC
Confidence                             55555554432221     112346899999999997   56788999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHH
Q 013973          320 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL  399 (433)
Q Consensus       320 ~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (433)
                      ..||......+....+.......+                    .                       .......++.++
T Consensus       222 ~~p~~~~~~~~~~~~~~~~~~~~~--------------------~-----------------------~~~~~~~~~~~l  258 (289)
T 3og7_A          222 QLPYSNINNRDQIIEMVGRGSLSP--------------------D-----------------------LSKVRSNCPKRM  258 (289)
T ss_dssp             SCTTSSCCCHHHHHHHHHHTSCCC--------------------C-----------------------TTSSCTTSCHHH
T ss_pred             CCCccccchHHHHHHHhcccccCc--------------------c-----------------------hhhccccCCHHH
Confidence            999987666554433222111000                    0                       001123567789


Q ss_pred             HHHHHhccccCCCCCCCHHHHhc
Q 013973          400 THLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       400 ~~li~~~L~~dP~~R~ta~ell~  422 (433)
                      .+||.+||+.||.+|||+.|+++
T Consensus       259 ~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          259 KRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHccCChhhCCCHHHHHH
Confidence            99999999999999999999986

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=7.5e-45  Score=350.03  Aligned_cols=267  Identities=22%  Similarity=0.242  Sum_probs=199.2

Q ss_pred             CceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           92 GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        92 ~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      .+...++|++.+.||+|+||.||+|.+. +++.||||++... ....+.+..|+.+++.+     .|+||+++++++...
T Consensus        34 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~  107 (321)
T 2qkw_B           34 LEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFC-----RHPHLVSLIGFCDER  107 (321)
T ss_dssp             CCCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSC-----CCTTBCCEEEECCCT
T ss_pred             HHHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEcCC
Confidence            3445688999999999999999999964 6788999988643 23445677888888776     679999999999999


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNY--RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                      +..++||||+ +++|.+++.....  ..+++..+..++.||+.||+|||++||+||||||+|||++.             
T Consensus       108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~-------------  174 (321)
T 2qkw_B          108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDE-------------  174 (321)
T ss_dssp             TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECT-------------
T ss_pred             CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECC-------------
Confidence            9999999999 8999999865432  35899999999999999999999999999999999999954             


Q ss_pred             CCCCCCcccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCC
Q 013973          248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL  322 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P  322 (433)
                                    ++.+||+|||++......     .....||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus       175 --------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p  240 (321)
T 2qkw_B          175 --------------NFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSA  240 (321)
T ss_dssp             --------------TCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTT
T ss_pred             --------------CCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCc
Confidence                          445666666666532211     1234699999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       323 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      |......+.......                .......+.+...-..    .            .........+.++.+|
T Consensus       241 ~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~----~------------~~~~~~~~~~~~l~~l  288 (321)
T 2qkw_B          241 IVQSLPREMVNLAEW----------------AVESHNNGQLEQIVDP----N------------LADKIRPESLRKFGDT  288 (321)
T ss_dssp             CSCSSSSSCCCHHHH----------------THHHHTTTCCCSSSSS----S------------CTTCSCHHHHHHHHHH
T ss_pred             ccccCcHHHHHHHHH----------------hhhccccccHHHhcCh----h------------hccccCHHHHHHHHHH
Confidence            976433211100000                0000000100000000    0            0000112346678999


Q ss_pred             HHhccccCCCCCCCHHHHhcC
Q 013973          403 LQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       403 i~~~L~~dP~~R~ta~ell~h  423 (433)
                      +.+||+.||++|||+.|+++|
T Consensus       289 i~~~l~~dP~~Rps~~ell~~  309 (321)
T 2qkw_B          289 AVKCLALSSEDRPSMGDVLWK  309 (321)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHcCCCcccCcCHHHHHHH
Confidence            999999999999999999876

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.2e-43  Score=336.15  Aligned_cols=253  Identities=25%  Similarity=0.351  Sum_probs=197.2

Q ss_pred             cCcEEEEe-eeeccccEEEEEEEEC--CCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           96 TSRYKIHS-KMGEGTFGQVLECWDR--ERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        96 ~~~~~~~~-~iG~G~~g~V~~~~~~--~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      .++|.+.+ .||+|+||.||+|.+.  .++..||+|+++..  ....+.+..|+.+++.+     .|+||+++++++ ..
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~-~~   81 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-----DNPYIVRLIGVC-QA   81 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEE-ES
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhC-----CCCCEeEEEEEe-cC
Confidence            46688887 9999999999999864  46788999999752  34456678899999988     678999999998 45


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      +.+++||||+ +++|.+++.... ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.++|+|||++...
T Consensus        82 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~  160 (287)
T 1u59_A           82 EALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL  160 (287)
T ss_dssp             SSEEEEEECCTTEEHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             CCcEEEEEeCCCCCHHHHHHhCC-ccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeee
Confidence            6799999999 789999997543 46999999999999999999999999999999999999976665555555544322


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCh
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN  328 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~  328 (433)
                      ......                     ........||+.|+|||++.+..++.++||||||+++|+|++ |..||...+.
T Consensus       161 ~~~~~~---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~  219 (287)
T 1u59_A          161 GADDSY---------------------YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG  219 (287)
T ss_dssp             TTCSCE---------------------ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT
T ss_pred             ccCcce---------------------eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH
Confidence            111000                     000112356889999999998899999999999999999998 9999987766


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      .+....+..                       +..                         ...+..++.++.+||.+||+
T Consensus       220 ~~~~~~i~~-----------------------~~~-------------------------~~~~~~~~~~l~~li~~~l~  251 (287)
T 1u59_A          220 PEVMAFIEQ-----------------------GKR-------------------------MECPPECPPELYALMSDCWI  251 (287)
T ss_dssp             HHHHHHHHT-----------------------TCC-------------------------CCCCTTCCHHHHHHHHHTTC
T ss_pred             HHHHHHHhc-----------------------CCc-------------------------CCCCCCcCHHHHHHHHHHcC
Confidence            554433211                       000                         01123567789999999999


Q ss_pred             cCCCCCCCHHHHhcCC
Q 013973          409 YDPTDRLTAREALRHP  424 (433)
Q Consensus       409 ~dP~~R~ta~ell~hp  424 (433)
                      .||++||++.|+++|.
T Consensus       252 ~~p~~Rps~~~l~~~l  267 (287)
T 1u59_A          252 YKWEDRPDFLTVEQRM  267 (287)
T ss_dssp             SSGGGSCCHHHHHHHH
T ss_pred             CChhhCcCHHHHHHHH
Confidence            9999999999999863

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=1.5e-43  Score=342.61  Aligned_cols=255  Identities=21%  Similarity=0.301  Sum_probs=199.7

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCe-----EEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKE-----MVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~-----~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      .++|++.+.||+|+||.||+|.+..+++     .||+|++...  ....+.+..|+.+++.+.    .|+||+++++++.
T Consensus        45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----~h~~iv~~~~~~~  120 (333)
T 2i1m_A           45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLG----QHENIVNLLGACT  120 (333)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHC----CCTTBCCEEEEEC
T ss_pred             HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhc----CCCCeeeEEEEEe
Confidence            4679999999999999999999877654     7999999743  234566788999999883    4688999999999


Q ss_pred             cCCeEEEEEecC-CCCHHHHHHhcC------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeecc
Q 013973          169 YRNHICIVFEKL-GSSLYDFLRKNN------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSS  235 (433)
Q Consensus       169 ~~~~~~lV~e~~-~~~L~~~l~~~~------------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~  235 (433)
                      ..+.+++||||+ +++|.+++....            ...+++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus       121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~  200 (333)
T 2i1m_A          121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG  200 (333)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGG
T ss_pred             cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCC
Confidence            999999999999 889999997532            2368999999999999999999999999999999999999877


Q ss_pred             CccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHH
Q 013973          236 EYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE  315 (433)
Q Consensus       236 ~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~e  315 (433)
                      +.++|+|||++.........                      .......||+.|+|||++.+..++.++|||||||++|+
T Consensus       201 ~~~kl~Dfg~~~~~~~~~~~----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  258 (333)
T 2i1m_A          201 HVAKIGDFGLARDIMNDSNY----------------------IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE  258 (333)
T ss_dssp             GEEEBCCCGGGCCGGGCTTS----------------------EECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             CeEEECccccccccccccce----------------------eecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHH
Confidence            76666666655422111000                      00122357889999999999999999999999999999


Q ss_pred             HHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCC
Q 013973          316 LCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH  394 (433)
Q Consensus       316 llt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (433)
                      |++ |..||.+.........+......                                               ...+..
T Consensus       259 l~t~g~~p~~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~  291 (333)
T 2i1m_A          259 IFSLGLNPYPGILVNSKFYKLVKDGYQ-----------------------------------------------MAQPAF  291 (333)
T ss_dssp             HTTTSCCSSTTCCSSHHHHHHHHHTCC-----------------------------------------------CCCCTT
T ss_pred             HHcCCCCCCcccchhHHHHHHHhcCCC-----------------------------------------------CCCCCC
Confidence            998 99999876543333222111000                                               001224


Q ss_pred             chhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          395 SAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       395 ~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                      .+.++.+||.+||+.||.+|||+.|++++
T Consensus       292 ~~~~l~~li~~~l~~~p~~Rps~~~l~~~  320 (333)
T 2i1m_A          292 APKNIYSIMQACWALEPTHRPTFQQICSF  320 (333)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence            56789999999999999999999999863

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=1.4e-43  Score=334.52  Aligned_cols=246  Identities=23%  Similarity=0.335  Sum_probs=194.2

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECC---CCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRE---RKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~---~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      .++|++.+.||+|+||.||+|.+..   ++..||+|++...  ....+.+..|+.+++.+     .|+||+++++++...
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~   85 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL-----DHPHIVKLIGIIEEE   85 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHH-----CCTTBCCEEEEECSS
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhC-----CCCCcceEEEEEcCC
Confidence            4679999999999999999998653   3456999998743  33456678899999999     678999999998754


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                       ..++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+||      
T Consensus        86 -~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Df------  157 (281)
T 3cc6_A           86 -PTWIIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDF------  157 (281)
T ss_dssp             -SCEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCC------
T ss_pred             -CCEEEEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCcc------
Confidence             568999999 899999998754 46999999999999999999999999999999999999976665555555      


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQ  324 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~  324 (433)
                                           |.+.......    ....||+.|+|||++.+..++.++||||||+++|+|++ |..||.
T Consensus       158 ---------------------g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~  216 (281)
T 3cc6_A          158 ---------------------GLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFF  216 (281)
T ss_dssp             ---------------------CGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred             ---------------------CCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcc
Confidence                                 4443322211    22356889999999999999999999999999999998 999998


Q ss_pred             CCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHH
Q 013973          325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  404 (433)
Q Consensus       325 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  404 (433)
                      ..+..+....+....                      ..                          ..+..+++.+.+||.
T Consensus       217 ~~~~~~~~~~~~~~~----------------------~~--------------------------~~~~~~~~~l~~li~  248 (281)
T 3cc6_A          217 WLENKDVIGVLEKGD----------------------RL--------------------------PKPDLCPPVLYTLMT  248 (281)
T ss_dssp             TSCGGGHHHHHHHTC----------------------CC--------------------------CCCTTCCHHHHHHHH
T ss_pred             cCChHHHHHHHhcCC----------------------CC--------------------------CCCCCCCHHHHHHHH
Confidence            665544333221110                      00                          012345678999999


Q ss_pred             hccccCCCCCCCHHHHhcC
Q 013973          405 GLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       405 ~~L~~dP~~R~ta~ell~h  423 (433)
                      +||+.||++|||+.|++++
T Consensus       249 ~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          249 RCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             HHTCSSGGGSCCHHHHHHH
T ss_pred             HHccCCchhCcCHHHHHHH
Confidence            9999999999999999864

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.1e-43  Score=341.86  Aligned_cols=247  Identities=21%  Similarity=0.306  Sum_probs=194.0

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCC----eEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERK----EMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~----~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      .++|.+.+.||+|+||.||+|.+..++    ..||+|+++..  ......+..|+.+++.+     .|+||+++++++..
T Consensus        43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~  117 (333)
T 1mqb_A           43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF-----SHHNIIRLEGVISK  117 (333)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEECS
T ss_pred             hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhC-----CCCCCCcEEEEEec
Confidence            467999999999999999999887553    45999999743  23445677889888887     67899999999999


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      .+.+++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++            
T Consensus       118 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~------------  184 (333)
T 1mqb_A          118 YKPMMIITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNL------------  184 (333)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC------------
T ss_pred             CCCcEEEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCC------------
Confidence            99999999999 789999998653 4799999999999999999999999999999999999995544            


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCC------CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEA  321 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~  321 (433)
                                     .+||+|||.+.......      ....+|+.|+|||++.+..++.++|||||||++|||++ |..
T Consensus       185 ---------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~  249 (333)
T 1mqb_A          185 ---------------VCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGER  249 (333)
T ss_dssp             ---------------CEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ---------------cEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCC
Confidence                           55555555554332211      11246788999999999999999999999999999999 999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       322 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      ||...+..+....+....                      ...                          .+..++.++.+
T Consensus       250 pf~~~~~~~~~~~~~~~~----------------------~~~--------------------------~~~~~~~~l~~  281 (333)
T 1mqb_A          250 PYWELSNHEVMKAINDGF----------------------RLP--------------------------TPMDCPSAIYQ  281 (333)
T ss_dssp             TTTTCCHHHHHHHHHTTC----------------------CCC--------------------------CCTTCBHHHHH
T ss_pred             CcccCCHHHHHHHHHCCC----------------------cCC--------------------------CcccCCHHHHH
Confidence            998776655443321110                      000                          12245778999


Q ss_pred             HHHhccccCCCCCCCHHHHhcC
Q 013973          402 LLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       402 li~~~L~~dP~~R~ta~ell~h  423 (433)
                      ||.+||+.||++||++.|++++
T Consensus       282 li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          282 LMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999999999998764

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=6.9e-44  Score=344.42  Aligned_cols=245  Identities=20%  Similarity=0.271  Sum_probs=191.1

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEE----EEEEeec--chhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMV----AIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~v----AiK~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      .++|++++.||+|+||.||+|.+..+++.|    |+|.+..  .......+..|+.+++.+     .|+||+++++++..
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~~~~~   88 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-----DNPHVCRLLGICLT   88 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTC-----CBTTBCCCCEEEES
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhC-----CCCCeeEEEEEEec
Confidence            367999999999999999999998888765    6666542  223456678899998887     67899999999987


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      .. .++|||++ +++|.+++.... ..+++..+..++.||+.||.|||++|||||||||+|||++.++.++|+|||    
T Consensus        89 ~~-~~~v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG----  162 (327)
T 3lzb_A           89 ST-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG----  162 (327)
T ss_dssp             SS-EEEEECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTT----
T ss_pred             CC-ceEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCc----
Confidence            65 77888888 999999998754 469999999999999999999999999999999999999766655555554    


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEAL  322 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P  322 (433)
                                             ++.......     ....||+.|+|||++.+..++.++|||||||++|||++ |..|
T Consensus       163 -----------------------~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p  219 (327)
T 3lzb_A          163 -----------------------LAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP  219 (327)
T ss_dssp             -----------------------C----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             -----------------------ceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCC
Confidence                                   443322111     12356889999999999999999999999999999999 9999


Q ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       323 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      |.+....+....+....                      ..                          ..+..++.++.+|
T Consensus       220 ~~~~~~~~~~~~~~~~~----------------------~~--------------------------~~~~~~~~~l~~l  251 (327)
T 3lzb_A          220 YDGIPASEISSILEKGE----------------------RL--------------------------PQPPICTIDVYMI  251 (327)
T ss_dssp             TTTCCGGGHHHHHHTTC----------------------CC--------------------------CCCTTBCHHHHHH
T ss_pred             CCCCCHHHHHHHHHcCC----------------------CC--------------------------CCCccCCHHHHHH
Confidence            98766544333221100                      00                          0123567789999


Q ss_pred             HHhccccCCCCCCCHHHHhc
Q 013973          403 LQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       403 i~~~L~~dP~~R~ta~ell~  422 (433)
                      |.+||+.||.+|||+.|+++
T Consensus       252 i~~~l~~dp~~Rps~~ell~  271 (327)
T 3lzb_A          252 MRKCWMIDADSRPKFRELII  271 (327)
T ss_dssp             HHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHcCCChhHCcCHHHHHH
Confidence            99999999999999999986

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.2e-44  Score=347.40  Aligned_cols=258  Identities=20%  Similarity=0.288  Sum_probs=187.7

Q ss_pred             cCceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           91 LGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        91 ~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      ....+.++|++++.||+|+||.||+|.+.  ++.||||++....  ......|.+++..+.   ..|+||+++++++...
T Consensus        31 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~--~~~~~~e~~~~~~~~---~~h~~i~~~~~~~~~~  103 (337)
T 3mdy_A           31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE--EASWFRETEIYQTVL---MRHENILGFIAADIKG  103 (337)
T ss_dssp             HHTTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG--HHHHHHHHHHHTSTT---CCCTTBCCEEEEEEES
T ss_pred             cccccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc--cchhhhHHHHHHHHh---hcCCCeeeEEEEEccC
Confidence            34455678999999999999999999875  8899999987433  233444555544332   2679999999998876


Q ss_pred             ----CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CceeccCCCCceEeeccCc
Q 013973          171 ----NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL--------CMIHTDLKPENVLLVSSEY  237 (433)
Q Consensus       171 ----~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~--------~ivHrDlKp~NILl~~~~~  237 (433)
                          ..+|+||||+ +++|.+++...   .+++..+..++.|++.||+|||+.        |||||||||+|||++.++ 
T Consensus       104 ~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~-  179 (337)
T 3mdy_A          104 TGSWTQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNG-  179 (337)
T ss_dssp             CGGGCEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTS-
T ss_pred             CCCCCceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCC-
Confidence                7899999999 88999999764   599999999999999999999998        999999999999995544 


Q ss_pred             cccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-------CceeecCcccchhhhhCCCCCCc------c
Q 013973          238 IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-------NYIVSTRHYRAPEVILGLGWTYP------C  304 (433)
Q Consensus       238 ~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~------~  304 (433)
                                                .+||+|||++.......       ...+||+.|+|||++.+..+...      +
T Consensus       180 --------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  233 (337)
T 3mdy_A          180 --------------------------TCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMA  233 (337)
T ss_dssp             --------------------------CEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHH
T ss_pred             --------------------------CEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCcccc
Confidence                                      55666666554332211       23479999999999988776665      9


Q ss_pred             hhHHHHHHHHHHHhC----------CCCCCCCChHH-HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchh
Q 013973          305 DIWSVGCILVELCTG----------EALFQTHENLE-HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRE  373 (433)
Q Consensus       305 DvwSlGv~l~elltg----------~~Pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  373 (433)
                      |||||||++|||++|          ..||....... ....+.....                 ........+.      
T Consensus       234 DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~------  290 (337)
T 3mdy_A          234 DMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVC-----------------IKKLRPSFPN------  290 (337)
T ss_dssp             HHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHT-----------------TSCCCCCCCG------
T ss_pred             chHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHh-----------------hhccCccccc------
Confidence            999999999999999          66665321100 0000000000                 0000000000      


Q ss_pred             hHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          374 SIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                                     ....+.++.++.+||.+||+.||++|||+.|+++|
T Consensus       291 ---------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          291 ---------------RWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             ---------------GGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             ---------------cchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence                           00112456789999999999999999999999875

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=3.5e-44  Score=338.11  Aligned_cols=244  Identities=23%  Similarity=0.322  Sum_probs=189.3

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee-cCCeEE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD-YRNHIC  174 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~-~~~~~~  174 (433)
                      .++|++.+.||+|+||.||+|.+.  ++.||+|+++.. ...+.+..|+.+++.+     .|+||+++++++. ..+.++
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~~   91 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-ATAQAFLAEASVMTQL-----RHSNLVQLLGVIVEEKGGLY   91 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCC-C--HHHHHTHHHHTTC-----CCTTBCCEEEEECCC--CCE
T ss_pred             hhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecch-hHHHHHHHHHHHHHhC-----CCCCEeeEEEEEEcCCCceE
Confidence            467999999999999999999874  788999999753 3456677899988887     6789999999864 445899


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +||||+ +++|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++                    
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~--------------------  151 (278)
T 1byg_A           92 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS--------------------  151 (278)
T ss_dssp             EEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC--------------------
T ss_pred             EEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEe--------------------
Confidence            999999 77999999875433489999999999999999999999999999999999994                    


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHL  332 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~~~  332 (433)
                             .++.+||+|||.+...........+|+.|+|||++.+..++.++||||||+++|+|++ |..||......+..
T Consensus       152 -------~~~~~~l~Dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~  224 (278)
T 1byg_A          152 -------EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV  224 (278)
T ss_dssp             -------TTSCEEECCCCC------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHH
T ss_pred             -------CCCcEEEeeccccccccccccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence                   4456777777776654444444568899999999999999999999999999999998 99999875543332


Q ss_pred             HHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCC
Q 013973          333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPT  412 (433)
Q Consensus       333 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  412 (433)
                      ..+.                       .+..                         ...+..+++++.+||.+||+.||.
T Consensus       225 ~~~~-----------------------~~~~-------------------------~~~~~~~~~~l~~li~~~l~~~p~  256 (278)
T 1byg_A          225 PRVE-----------------------KGYK-------------------------MDAPDGCPPAVYEVMKNCWHLDAA  256 (278)
T ss_dssp             HHHT-----------------------TTCC-------------------------CCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             HHHh-----------------------cCCC-------------------------CCCcccCCHHHHHHHHHHhcCChh
Confidence            2211                       1100                         011235677899999999999999


Q ss_pred             CCCCHHHHhc
Q 013973          413 DRLTAREALR  422 (433)
Q Consensus       413 ~R~ta~ell~  422 (433)
                      +|||+.|+++
T Consensus       257 ~Rps~~~l~~  266 (278)
T 1byg_A          257 MRPSFLQLRE  266 (278)
T ss_dssp             GSCCHHHHHH
T ss_pred             hCCCHHHHHH
Confidence            9999999875

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=2.1e-43  Score=335.08  Aligned_cols=244  Identities=23%  Similarity=0.346  Sum_probs=193.8

Q ss_pred             cCcEEEEe-eeeccccEEEEEEE--ECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           96 TSRYKIHS-KMGEGTFGQVLECW--DRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        96 ~~~~~~~~-~iG~G~~g~V~~~~--~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      .++|++.+ .||+|+||.||+|.  ...+++.||||+++...   ...+.+..|+.+++.+     .|+||+++++++ .
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~-~   88 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-----DNPYIVRMIGIC-E   88 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTC-----CCTTBCCEEEEE-E
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhC-----CCCCEEEEEEEE-C
Confidence            36799998 99999999999994  46678899999997432   2355677899998888     678999999998 5


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      .+..++||||+ +++|.+++....  .+++..+..++.||+.||+|||+.||+||||||+|||++.++.++|+|||    
T Consensus        89 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg----  162 (291)
T 1xbb_A           89 AESWMLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFG----  162 (291)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCT----
T ss_pred             CCCcEEEEEeCCCCCHHHHHHhCc--CCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCC----
Confidence            67789999999 899999998754  69999999999999999999999999999999999999766655555555    


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCC------CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEA  321 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~  321 (433)
                                             ++.......      ....||+.|+|||++.+..++.++||||||+++|+|++ |..
T Consensus       163 -----------------------~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~  219 (291)
T 1xbb_A          163 -----------------------LSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK  219 (291)
T ss_dssp             -----------------------TCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCC
T ss_pred             -----------------------cceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCC
Confidence                                   443322211      11246788999999999889999999999999999999 999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       322 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      ||.+.+..+....+..                       +..                         ...+..++.++.+
T Consensus       220 p~~~~~~~~~~~~~~~-----------------------~~~-------------------------~~~~~~~~~~l~~  251 (291)
T 1xbb_A          220 PYRGMKGSEVTAMLEK-----------------------GER-------------------------MGCPAGCPREMYD  251 (291)
T ss_dssp             SSTTCCHHHHHHHHHT-----------------------TCC-------------------------CCCCTTCCHHHHH
T ss_pred             CCCCCCHHHHHHHHHc-----------------------CCC-------------------------CCCCCCCCHHHHH
Confidence            9988766554333211                       000                         0012356778999


Q ss_pred             HHHhccccCCCCCCCHHHHhc
Q 013973          402 LLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       402 li~~~L~~dP~~R~ta~ell~  422 (433)
                      ||.+||+.||.+|||+.++++
T Consensus       252 li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          252 LMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHHH
Confidence            999999999999999999875

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=8.4e-44  Score=343.60  Aligned_cols=249  Identities=22%  Similarity=0.294  Sum_probs=195.9

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEE--EEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMV--AIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~v--AiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .++|++.+.||+|+||.||+|.+..++..+  |+|.++..  ....+.+..|+.+++++.    .|+||+++++++...+
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~----~hp~iv~~~~~~~~~~   99 (327)
T 1fvr_A           24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG----HHPNIINLLGACEHRG   99 (327)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCC----CCTTBCCEEEEEEETT
T ss_pred             HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhcc----CCCchhhhceeeeeCC
Confidence            367999999999999999999999888865  99988642  223445677888877662    5688999999999999


Q ss_pred             eEEEEEecC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNN--------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSE  236 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~  236 (433)
                      .+|+||||+ +++|.+++....              ...+++..+..++.||+.||.|||++||+||||||+|||++.++
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~  179 (327)
T 1fvr_A          100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY  179 (327)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGG
T ss_pred             ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCC
Confidence            999999999 889999998643              24699999999999999999999999999999999999996544


Q ss_pred             ccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCC--CCCceeecCcccchhhhhCCCCCCcchhHHHHHHHH
Q 013973          237 YIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP--DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILV  314 (433)
Q Consensus       237 ~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~  314 (433)
                                                 .+||+|||++.....  ......+|+.|+|||++.+..++.++|||||||++|
T Consensus       180 ---------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  232 (327)
T 1fvr_A          180 ---------------------------VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLW  232 (327)
T ss_dssp             ---------------------------CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHH
T ss_pred             ---------------------------eEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHH
Confidence                                       456666665542221  112235788999999999988999999999999999


Q ss_pred             HHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcC
Q 013973          315 ELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD  393 (433)
Q Consensus       315 ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (433)
                      +|++ |..||.+.+..+....+.                       .+..                         ...+.
T Consensus       233 ellt~g~~pf~~~~~~~~~~~~~-----------------------~~~~-------------------------~~~~~  264 (327)
T 1fvr_A          233 EIVSLGGTPYCGMTCAELYEKLP-----------------------QGYR-------------------------LEKPL  264 (327)
T ss_dssp             HHHTTSCCTTTTCCHHHHHHHGG-----------------------GTCC-------------------------CCCCT
T ss_pred             HHHcCCCCCCCCCcHHHHHHHhh-----------------------cCCC-------------------------CCCCC
Confidence            9998 999998776554332211                       1000                         00123


Q ss_pred             CchhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          394 HSAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       394 ~~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                      .++.++.+||.+||+.||.+|||+.|+++|
T Consensus       265 ~~~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          265 NCDDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             TBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            567789999999999999999999999875

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=2.7e-43  Score=335.78  Aligned_cols=261  Identities=24%  Similarity=0.344  Sum_probs=195.6

Q ss_pred             cCcEEEEeeeeccccEEEEEEE----ECCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           96 TSRYKIHSKMGEGTFGQVLECW----DRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~----~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      ..+|++++.||+|+||.||+|+    +..+++.||+|+++...  .....+..|+.+++.+     .|+||+++++++..
T Consensus        20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~   94 (302)
T 4e5w_A           20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-----YHENIVKYKGICTE   94 (302)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTC-----CCTTBCCEEEEEEC
T ss_pred             hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhC-----CCCCeeeeeeEEec
Confidence            4569999999999999999998    67789999999987432  2345677899999888     67899999999877


Q ss_pred             C--CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCC
Q 013973          170 R--NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  246 (433)
Q Consensus       170 ~--~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~  246 (433)
                      .  ..+++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.++       
T Consensus        95 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~k-------  166 (302)
T 4e5w_A           95 DGGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVK-------  166 (302)
T ss_dssp             ---CCEEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEE-------
T ss_pred             CCCceEEEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEE-------
Confidence            6  6799999999 889999996654 4699999999999999999999999999999999999997665544       


Q ss_pred             CCCCCCCcccccCCCCCCEEEEecCCccccCCCC------CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCC
Q 013973          247 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE  320 (433)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~  320 (433)
                                          |+|||.+.......      ....||..|+|||++.+..++.++||||||+++|+|++|.
T Consensus       167 --------------------l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  226 (302)
T 4e5w_A          167 --------------------IGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYC  226 (302)
T ss_dssp             --------------------ECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTT
T ss_pred             --------------------ECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHcc
Confidence                                55555444332221      1235788899999999999999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHH
Q 013973          321 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  400 (433)
Q Consensus       321 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (433)
                      .|+....     ..+....++........  . ....+..+                         .....+..++.++.
T Consensus       227 ~p~~~~~-----~~~~~~~~~~~~~~~~~--~-~~~~~~~~-------------------------~~~~~~~~~~~~l~  273 (302)
T 4e5w_A          227 DSDSSPM-----ALFLKMIGPTHGQMTVT--R-LVNTLKEG-------------------------KRLPCPPNCPDEVY  273 (302)
T ss_dssp             CGGGSHH-----HHHHHHHCSCCGGGHHH--H-HHHHHHTT-------------------------CCCCCCTTCCHHHH
T ss_pred             CCCcchh-----hHHhhccCCcccccCHH--H-HHHHHhcc-------------------------CCCCCCCCCCHHHH
Confidence            9875321     11222222222111000  0 00000000                         00112346778999


Q ss_pred             HHHHhccccCCCCCCCHHHHhc
Q 013973          401 HLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       401 ~li~~~L~~dP~~R~ta~ell~  422 (433)
                      +||.+||+.||.+|||+.|+++
T Consensus       274 ~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          274 QLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             HHHHHTTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHcCCCCCCCCCHHHHHH
Confidence            9999999999999999999985

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=2.3e-43  Score=336.36  Aligned_cols=243  Identities=26%  Similarity=0.499  Sum_probs=189.4

Q ss_pred             ecCcEEEE-eeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec----
Q 013973           95 LTSRYKIH-SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY----  169 (433)
Q Consensus        95 ~~~~~~~~-~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~----  169 (433)
                      +.++|.++ +.||+|+||.||+|.+..+++.||+|+++..    .....|+.++.++.    .|+||+++++++..    
T Consensus        15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~e~~~~~~~~----~h~~i~~~~~~~~~~~~~   86 (299)
T 3m2w_A           15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRAS----QCPHIVRIVDVYENLYAG   86 (299)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHT----TSTTBCCEEEEEEEEETT
T ss_pred             cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc----HHHHHHHHHHHHhc----cCCCchhHHhhhhhhcCC
Confidence            44678887 7899999999999999999999999999743    34566787775553    56889999999876    


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      ...+++||||+ +++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++..             
T Consensus        87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~-------------  153 (299)
T 3m2w_A           87 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK-------------  153 (299)
T ss_dssp             EEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSS-------------
T ss_pred             CceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecC-------------
Confidence            78899999999 8899999998766679999999999999999999999999999999999999542             


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                                 ..++.+||+|||++....                   +..++.++|||||||++|||++|..||.....
T Consensus       154 -----------~~~~~~kl~Dfg~a~~~~-------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~  203 (299)
T 3m2w_A          154 -----------RPNAILKLTDFGFAKETT-------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG  203 (299)
T ss_dssp             -----------STTCCEEECCCTTCEECT-------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC---
T ss_pred             -----------CCCCcEEEeccccccccc-------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcc
Confidence                       125678999999876432                   23578899999999999999999999976543


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      ......                   ....+..+....+                      ...+..++.++.+||.+||+
T Consensus       204 ~~~~~~-------------------~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~li~~~l~  242 (299)
T 3m2w_A          204 LAISPG-------------------MKTRIRMGQYEFP----------------------NPEWSEVSEEVKMLIRNLLK  242 (299)
T ss_dssp             ----CC-------------------SCCSSCTTCCSSC----------------------HHHHTTSCHHHHHHHHHHTC
T ss_pred             hhhhHH-------------------HHHHHhhccccCC----------------------chhcccCCHHHHHHHHHHcc
Confidence            221100                   0000111111111                      01124567899999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCC
Q 013973          409 YDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       409 ~dP~~R~ta~ell~hp~f~~~  429 (433)
                      .||.+|||+.|+|+||||++.
T Consensus       243 ~dP~~Rps~~e~l~hp~~~~~  263 (299)
T 3m2w_A          243 TEPTQRMTITEFMNHPWIMQS  263 (299)
T ss_dssp             SSTTTSCCHHHHHTSHHHHTG
T ss_pred             cChhhCCCHHHHhcChhhccc
Confidence            999999999999999999764

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=3.3e-44  Score=347.47  Aligned_cols=272  Identities=20%  Similarity=0.219  Sum_probs=184.3

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEeccee-----ecC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF-----DYR  170 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~-----~~~  170 (433)
                      .++|++++.||+|+||.||+|.+  +++.||||++.....  .....|.+++..   ....|+||+++++.+     ...
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~e~~~~~~---~~~~h~~i~~~~~~~~~~~~~~~   84 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANR--QNFINEKNIYRV---PLMEHDNIARFIVGDERVTADGR   84 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGGH--HHHHHHHHHHTS---TTCCCTTBCCEEEEEEEECTTSC
T ss_pred             hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccch--hhHHHHHHHHHH---HhccCcchhhheecccccccCCC
Confidence            36799999999999999999976  688999999974332  333344443321   123778999998743     334


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---------CceeccCCCCceEeeccCcccc
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL---------CMIHTDLKPENVLLVSSEYIKV  240 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---------~ivHrDlKp~NILl~~~~~~~i  240 (433)
                      ..+++||||+ +++|.+++...   .+++..+..++.||+.||.|||+.         |||||||||+|||++.++.   
T Consensus        85 ~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~---  158 (336)
T 3g2f_A           85 MEYLLVMEYYPNGSLXKYLSLH---TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGT---  158 (336)
T ss_dssp             EEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSC---
T ss_pred             ceEEEEEecCCCCcHHHHHhhc---ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCc---
Confidence            5789999999 89999999875   468999999999999999999999         9999999999999965554   


Q ss_pred             CCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC-----------CCceeecCcccchhhhhC-------CCCCC
Q 013973          241 PDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----------QNYIVSTRHYRAPEVILG-------LGWTY  302 (433)
Q Consensus       241 ~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----------~~~~~gt~~y~aPE~~~~-------~~~~~  302 (433)
                                              +||+|||++......           ....+||+.|+|||++.+       ..++.
T Consensus       159 ------------------------~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  214 (336)
T 3g2f_A          159 ------------------------CVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALK  214 (336)
T ss_dssp             ------------------------EEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHH
T ss_pred             ------------------------EEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCccccccccccc
Confidence                                    555555554432211           123469999999999987       35678


Q ss_pred             cchhHHHHHHHHHHHhCCCCCCC-CChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhc--cCcccCCCCccchhhHhhhc
Q 013973          303 PCDIWSVGCILVELCTGEALFQT-HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVR--RGRLDWPEGAASRESIKSVM  379 (433)
Q Consensus       303 ~~DvwSlGv~l~elltg~~Pf~~-~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  379 (433)
                      ++|||||||++|||++|..||.. ....+....+....+..|....  .    ...+.  ......|+...         
T Consensus       215 ~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~---------  279 (336)
T 3g2f_A          215 QVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFED--M----QVLVSREKQRPKFPEAWK---------  279 (336)
T ss_dssp             HHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHH--H----HHHHTTSCCCCCCCTTCC---------
T ss_pred             ccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHH--H----HhhhcccccCCCCCcccc---------
Confidence            89999999999999999766533 2221111111111222221100  0    00000  00111111000         


Q ss_pred             cchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHH------hcCCCCCCCC
Q 013973          380 KLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREA------LRHPFFTRDH  430 (433)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~el------l~hp~f~~~~  430 (433)
                                 .....+.++.+||.+||+.||++|||+.|+      +.++|-++..
T Consensus       280 -----------~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~~~  325 (336)
T 3g2f_A          280 -----------ENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKS  325 (336)
T ss_dssp             -----------CCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC---
T ss_pred             -----------cccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhccc
Confidence                       011245679999999999999999999999      5578877653

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=4.9e-44  Score=345.21  Aligned_cols=262  Identities=22%  Similarity=0.274  Sum_probs=196.3

Q ss_pred             cCcEEEEeeeeccccEEEEEEE----ECCCCeEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee--
Q 013973           96 TSRYKIHSKMGEGTFGQVLECW----DRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD--  168 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~----~~~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~--  168 (433)
                      .++|++++.||+|+||.||+|+    +..+++.||||++... ....+.+..|+.+++++     .|+||+++++++.  
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~   96 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-----HSDFIVKYRGVSYGP   96 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEEECS
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhc-----CCCceeEEEEEEecC
Confidence            3689999999999999999998    5778999999999743 33445678899999888     6788999998875  


Q ss_pred             cCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC
Q 013973          169 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       169 ~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                      ....+++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.++        
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~k--------  167 (327)
T 3lxl_A           97 GRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVK--------  167 (327)
T ss_dssp             SSCEEEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEE--------
T ss_pred             CCceEEEEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEE--------
Confidence            567799999999 999999998643 2699999999999999999999999999999999999997665555        


Q ss_pred             CCCCCCcccccCCCCCCEEEEecCCccccCCCC------CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCC
Q 013973          248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA  321 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~  321 (433)
                                         |+|||.+.......      ....||..|+|||++.+..++.++||||||+++|+|++|..
T Consensus       168 -------------------l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~  228 (327)
T 3lxl_A          168 -------------------IADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCD  228 (327)
T ss_dssp             -------------------ECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTC
T ss_pred             -------------------EcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCC
Confidence                               45555444322211      12357888999999999999999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       322 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      ||...........  ......+..  .   . ....+..+                         .....+..++.++.+
T Consensus       229 p~~~~~~~~~~~~--~~~~~~~~~--~---~-~~~~~~~~-------------------------~~~~~~~~~~~~l~~  275 (327)
T 3lxl_A          229 KSCSPSAEFLRMM--GCERDVPAL--S---R-LLELLEEG-------------------------QRLPAPPACPAEVHE  275 (327)
T ss_dssp             GGGSHHHHHHHHC--C----CCHH--H---H-HHHHHHTT-------------------------CCCCCCTTCCHHHHH
T ss_pred             CCccccchhhhhc--ccccccccH--H---H-HHHHhhcc-------------------------cCCCCCCcccHHHHH
Confidence            9975332211100  000000000  0   0 00000000                         001123467789999


Q ss_pred             HHHhccccCCCCCCCHHHHhcC
Q 013973          402 LLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       402 li~~~L~~dP~~R~ta~ell~h  423 (433)
                      ||.+||+.||++|||+.|++++
T Consensus       276 li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          276 LMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999999999999654

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=4e-43  Score=334.07  Aligned_cols=245  Identities=17%  Similarity=0.204  Sum_probs=189.9

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCC---CeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecce-eecC
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRER---KEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW-FDYR  170 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~---~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~-~~~~  170 (433)
                      .+|++.+.||+|+||.||+|.+..+   ...||+|.++..  ....+.+..|+.+++++     .|+||++++++ +...
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~   99 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-----SHPNVLSLLGICLRSE   99 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-----CCTTBCCCCEEECCSS
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhC-----CCCCEeeeeeEEEcCC
Confidence            4699999999999999999997544   346899998642  23445677899988888     67899999998 4667


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      +..++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.            
T Consensus       100 ~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~------------  166 (298)
T 3f66_A          100 GSPLVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFT------------  166 (298)
T ss_dssp             SCCEEEEECCTTCBHHHHHHCTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCC------------
T ss_pred             CceEEEEeCCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCC------------
Confidence            7899999999 889999997643 46899999999999999999999999999999999999965554            


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCC-------CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPD-------QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEA  321 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~  321 (433)
                                     +||+|||.+......       .....||+.|+|||++.+..++.++||||||+++|+|++ |.+
T Consensus       167 ---------------~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~  231 (298)
T 3f66_A          167 ---------------VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP  231 (298)
T ss_dssp             ---------------EEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ---------------EEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCC
Confidence                           555555554432211       122367889999999999999999999999999999999 677


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       322 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      ||...+..+....+.....                      .                          ..+..++.++.+
T Consensus       232 ~~~~~~~~~~~~~~~~~~~----------------------~--------------------------~~~~~~~~~l~~  263 (298)
T 3f66_A          232 PYPDVNTFDITVYLLQGRR----------------------L--------------------------LQPEYCPDPLYE  263 (298)
T ss_dssp             SSTTSCTTTHHHHHHTTCC----------------------C--------------------------CCCTTCCHHHHH
T ss_pred             CCccCCHHHHHHHHhcCCC----------------------C--------------------------CCCccCCHHHHH
Confidence            7876554443322211100                      0                          012245678999


Q ss_pred             HHHhccccCCCCCCCHHHHhc
Q 013973          402 LLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       402 li~~~L~~dP~~R~ta~ell~  422 (433)
                      ||.+||+.||++|||+.|+++
T Consensus       264 li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          264 VMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHHH
Confidence            999999999999999999886

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=1.5e-43  Score=364.15  Aligned_cols=252  Identities=27%  Similarity=0.358  Sum_probs=202.9

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ..++|++.++||+|+||.||+|.+..+ ..||||+++......+.+..|+.+++++     .|+||+++++++.. +.+|
T Consensus       265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~-~~~~  337 (535)
T 2h8h_A          265 PRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKL-----RHEKLVQLYAVVSE-EPIY  337 (535)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTT-EEEEEEEECTTSSCHHHHHHHHHHHHHC-----CCTTBCCEEEEECS-SSCE
T ss_pred             chhhhhhheecccCCCeEEEEEEECCC-ceEEEEEeCCCCCCHHHHHHHHHHHHhC-----CCCCEeeEEEEEee-ccce
Confidence            356799999999999999999998754 5699999986555567788999999998     67899999998876 6789


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      |||||+ +++|.++|.......+++..+..++.||+.||+|||++|||||||||+|||++.++                 
T Consensus       338 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~-----------------  400 (535)
T 2h8h_A          338 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL-----------------  400 (535)
T ss_dssp             EEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG-----------------
T ss_pred             EeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCC-----------------
Confidence            999999 88999999764334699999999999999999999999999999999999996544                 


Q ss_pred             cccccCCCCCCEEEEecCCccccCCC----CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCh
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN  328 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~  328 (433)
                                .+||+|||+++.....    .....+|..|+|||++.+..++.++|||||||++|||++ |..||.+...
T Consensus       401 ----------~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~  470 (535)
T 2h8h_A          401 ----------VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN  470 (535)
T ss_dssp             ----------CEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH
T ss_pred             ----------cEEEcccccceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence                      4556666655443221    112246788999999999999999999999999999999 9999988776


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      .+.+..+....                      ..                          ..+..++.++.+||.+||+
T Consensus       471 ~~~~~~i~~~~----------------------~~--------------------------~~~~~~~~~l~~li~~cl~  502 (535)
T 2h8h_A          471 REVLDQVERGY----------------------RM--------------------------PCPPECPESLHDLMCQCWR  502 (535)
T ss_dssp             HHHHHHHHTTC----------------------CC--------------------------CCCTTCCHHHHHHHHHHTC
T ss_pred             HHHHHHHHcCC----------------------CC--------------------------CCCCCCCHHHHHHHHHHcC
Confidence            65544322110                      00                          0123567789999999999


Q ss_pred             cCCCCCCCHHHHhcC--CCCCC
Q 013973          409 YDPTDRLTAREALRH--PFFTR  428 (433)
Q Consensus       409 ~dP~~R~ta~ell~h--p~f~~  428 (433)
                      .||++|||+.+|++.  .+|..
T Consensus       503 ~dP~~RPt~~~l~~~L~~~~~~  524 (535)
T 2h8h_A          503 KEPEERPTFEYLQAFLEDYFTS  524 (535)
T ss_dssp             SSGGGSCCHHHHHHHHHTSSCC
T ss_pred             CChhHCcCHHHHHHHHHHHhhc
Confidence            999999999998874  55543

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=4.1e-43  Score=336.49  Aligned_cols=248  Identities=18%  Similarity=0.250  Sum_probs=189.3

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECC---CCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRE---RKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~---~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      .++|.+.+.||+|+||.||+|.+..   +++.||+|+++..   ....+.+..|+.+++.+     .|+||+++++++..
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~  107 (313)
T 3brb_A           33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF-----SHPNVIRLLGVCIE  107 (313)
T ss_dssp             GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTC-----CCTTBCCCCEEEEC
T ss_pred             HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcC-----CCCCeeeeeEEEee
Confidence            4689999999999999999998765   5668999998632   33345677888888887     67999999999876


Q ss_pred             CC-----eEEEEEecC-CCCHHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccc
Q 013973          170 RN-----HICIVFEKL-GSSLYDFLRKN----NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIK  239 (433)
Q Consensus       170 ~~-----~~~lV~e~~-~~~L~~~l~~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~  239 (433)
                      ..     ..++||||+ +++|.+++...    ....+++..+..++.||+.||.|||++||+||||||+|||++.++   
T Consensus       108 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~---  184 (313)
T 3brb_A          108 MSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDM---  184 (313)
T ss_dssp             -------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTS---
T ss_pred             ccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCC---
Confidence            54     459999999 88999998542    235699999999999999999999999999999999999995544   


Q ss_pred             cCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhCCCCCCcchhHHHHHHHH
Q 013973          240 VPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILV  314 (433)
Q Consensus       240 i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~  314 (433)
                                              .+||+|||++......     .....||+.|+|||++.+..++.++||||||+++|
T Consensus       185 ------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  240 (313)
T 3brb_A          185 ------------------------TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMW  240 (313)
T ss_dssp             ------------------------CEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHH
T ss_pred             ------------------------cEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHH
Confidence                                    4555555555433221     12235788999999999999999999999999999


Q ss_pred             HHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcC
Q 013973          315 ELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD  393 (433)
Q Consensus       315 ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  393 (433)
                      +|++ |..||.+....+....+...                      ...                          ..+.
T Consensus       241 el~~~g~~p~~~~~~~~~~~~~~~~----------------------~~~--------------------------~~~~  272 (313)
T 3brb_A          241 EIATRGMTPYPGVQNHEMYDYLLHG----------------------HRL--------------------------KQPE  272 (313)
T ss_dssp             HHHTTSCCSSTTCCGGGHHHHHHTT----------------------CCC--------------------------CCBT
T ss_pred             HHHhcCCCCCccCCHHHHHHHHHcC----------------------CCC--------------------------CCCc
Confidence            9999 99999876654433322110                      000                          1123


Q ss_pred             CchhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          394 HSAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       394 ~~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                      .++.++.+||.+||+.||.+|||+.+++++
T Consensus       273 ~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          273 DCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             TCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             cccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            567789999999999999999999999864

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=7.8e-43  Score=331.81  Aligned_cols=244  Identities=20%  Similarity=0.265  Sum_probs=189.9

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCe---EEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKE---MVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~---~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      .|.+.+.||+|+||.||+|.+..+++   .||+|++....  ...+.+..|+.+++.+     .|+||+++++++...+.
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~   96 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGL-----NHPNVLALIGIMLPPEG   96 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-----CCTTBCCCCEEECCSSS
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhC-----CCCCeeeEEEEEecCCC
Confidence            47888999999999999999765544   79999986432  3446677899998888     67999999999976655


Q ss_pred             E-EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          173 I-CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       173 ~-~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      . ++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++              
T Consensus        97 ~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~--------------  161 (298)
T 3pls_A           97 LPHVLLPYMCHGDLLQFIRSPQ-RNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESF--------------  161 (298)
T ss_dssp             CCEEEECCCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTC--------------
T ss_pred             CcEEEEecccCCCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCC--------------
Confidence            4 9999999 999999998643 4789999999999999999999999999999999999995544              


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCC-------CCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhC-CCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERP-------DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG-EAL  322 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg-~~P  322 (433)
                                   .+||+|||.+.....       ......||+.|+|||.+.+..++.++||||||+++|+|++| .+|
T Consensus       162 -------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~  228 (298)
T 3pls_A          162 -------------TVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPP  228 (298)
T ss_dssp             -------------CEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCT
T ss_pred             -------------cEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCC
Confidence                         455555555543211       11234678999999999999999999999999999999995 555


Q ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       323 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      |...+..+....+....                      ..                          ..+..++.++.+|
T Consensus       229 ~~~~~~~~~~~~~~~~~----------------------~~--------------------------~~~~~~~~~l~~l  260 (298)
T 3pls_A          229 YRHIDPFDLTHFLAQGR----------------------RL--------------------------PQPEYCPDSLYQV  260 (298)
T ss_dssp             TTTSCGGGHHHHHHTTC----------------------CC--------------------------CCCTTCCHHHHHH
T ss_pred             CccCCHHHHHHHhhcCC----------------------CC--------------------------CCCccchHHHHHH
Confidence            65544433322211100                      00                          0123456789999


Q ss_pred             HHhccccCCCCCCCHHHHhc
Q 013973          403 LQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       403 i~~~L~~dP~~R~ta~ell~  422 (433)
                      |.+||+.||.+|||+.++++
T Consensus       261 i~~~l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          261 MQQCWEADPAVRPTFRVLVG  280 (298)
T ss_dssp             HHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHccCChhhCcCHHHHHH
Confidence            99999999999999998875

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=1.2e-43  Score=347.78  Aligned_cols=210  Identities=21%  Similarity=0.289  Sum_probs=168.7

Q ss_pred             cCcEEEEeeeeccccEEEEEE-----EECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           96 TSRYKIHSKMGEGTFGQVLEC-----WDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~-----~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      .++|.+.+.||+|+||+||+|     .+..+++.||||+++..  ....+..|+.+++.+.+  ..|++++.+++.+...
T Consensus        64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~--~~~~~iv~~~~~~~~~  139 (365)
T 3e7e_A           64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKP--SMQHMFMKFYSAHLFQ  139 (365)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCG--GGGGGBCCEEEEEECS
T ss_pred             CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhh--hhhhhhhhhheeeecC
Confidence            467999999999999999999     46778899999999743  34556778888888743  2468899999999999


Q ss_pred             CeEEEEEecC-CCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKN---NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  246 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~  246 (433)
                      +..||||||+ +|+|.+++...   ....+++..+..++.||+.||+|||++|||||||||+|||++.+....       
T Consensus       140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~-------  212 (365)
T 3e7e_A          140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQ-------  212 (365)
T ss_dssp             SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC-------
T ss_pred             CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCc-------
Confidence            9999999999 89999999752   234799999999999999999999999999999999999996521000       


Q ss_pred             CCCCCCCcccccCCCCCCEEEEecCCccccCC--C---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCC
Q 013973          247 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP--D---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA  321 (433)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~  321 (433)
                           .    ...+.++.+||+|||++.....  .   ....+||+.|+|||++.+..|+.++|||||||++|||++|+.
T Consensus       213 -----~----~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~  283 (365)
T 3e7e_A          213 -----D----DEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTY  283 (365)
T ss_dssp             ---------------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSC
T ss_pred             -----c----ccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCC
Confidence                 0    0002356788888888854321  1   133579999999999999999999999999999999999999


Q ss_pred             CCCC
Q 013973          322 LFQT  325 (433)
Q Consensus       322 Pf~~  325 (433)
                      ||..
T Consensus       284 pf~~  287 (365)
T 3e7e_A          284 MKVK  287 (365)
T ss_dssp             CCEE
T ss_pred             cccc
Confidence            9964

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=7.8e-43  Score=363.90  Aligned_cols=251  Identities=25%  Similarity=0.363  Sum_probs=194.2

Q ss_pred             cCcEEEEe-eeeccccEEEEEEEEC--CCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           96 TSRYKIHS-KMGEGTFGQVLECWDR--ERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        96 ~~~~~~~~-~iG~G~~g~V~~~~~~--~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      .+++.+.+ .||+|+||.||+|.++  .++..||||+++..  ....+.+..|+.+++++     .|+||+++++++.. 
T Consensus       334 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l-----~hpniv~l~~~~~~-  407 (613)
T 2ozo_A          334 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-----DNPYIVRLIGVCQA-  407 (613)
T ss_dssp             TTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTC-----CCTTBCCEEEEEES-
T ss_pred             ccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhC-----CCCCEeeEEEEecc-
Confidence            45677776 8999999999999875  35667999999753  23456788899999887     67999999999876 


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      +.++|||||+ +|+|.+++.... ..+++..+..++.||+.||+|||++|||||||||+|||++.++.+||+|||++...
T Consensus       408 ~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~  486 (613)
T 2ozo_A          408 EALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKAL  486 (613)
T ss_dssp             SSEEEEEECCTTCBHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTC
T ss_pred             CCeEEEEEeCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccc
Confidence            5699999999 899999997643 46999999999999999999999999999999999999977666555555555433


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCh
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHEN  328 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~  328 (433)
                      .......                     .......+|+.|+|||++.+..++.++|||||||++|||++ |..||.+.+.
T Consensus       487 ~~~~~~~---------------------~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~  545 (613)
T 2ozo_A          487 GADDSYY---------------------TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG  545 (613)
T ss_dssp             C-----------------------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS
T ss_pred             cCCCcee---------------------eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH
Confidence            2110000                     00011245789999999999999999999999999999998 9999998776


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      .+....+..                       +..                         ...+..++.++.+||.+||+
T Consensus       546 ~~~~~~i~~-----------------------~~~-------------------------~~~p~~~~~~l~~li~~cl~  577 (613)
T 2ozo_A          546 PEVMAFIEQ-----------------------GKR-------------------------MECPPECPPELYALMSDCWI  577 (613)
T ss_dssp             HHHHHHHHT-----------------------TCC-------------------------CCCCTTCCHHHHHHHHHTTC
T ss_pred             HHHHHHHHc-----------------------CCC-------------------------CCCCCcCCHHHHHHHHHHcC
Confidence            665443321                       100                         01123567899999999999


Q ss_pred             cCCCCCCCHHHHhc
Q 013973          409 YDPTDRLTAREALR  422 (433)
Q Consensus       409 ~dP~~R~ta~ell~  422 (433)
                      .||++||++.++++
T Consensus       578 ~dP~~RPs~~~l~~  591 (613)
T 2ozo_A          578 YKWEDRPDFLTVEQ  591 (613)
T ss_dssp             SSTTTSCCHHHHHH
T ss_pred             CChhHCcCHHHHHH
Confidence            99999999998853

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=3.2e-44  Score=357.67  Aligned_cols=251  Identities=17%  Similarity=0.208  Sum_probs=187.5

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCC-----------CCCceE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDK-----------GGNRCV  161 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~-----------~~~~i~  161 (433)
                      ..|.+.+.||+|+||+||+|.+..+|+.||||+++...    ...+.+.+|+.+++.+.+..+           ....++
T Consensus        78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  157 (413)
T 3dzo_A           78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV  157 (413)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred             eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence            45899999999999999999999999999999987221    224556778888776644210           000111


Q ss_pred             Ee------cceeec-----CCeEEEEEecCCCCHHHHHH-----hcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 013973          162 QI------RNWFDY-----RNHICIVFEKLGSSLYDFLR-----KNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDL  225 (433)
Q Consensus       162 ~~------~~~~~~-----~~~~~lV~e~~~~~L~~~l~-----~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDl  225 (433)
                      .+      ...+..     ...++++|++++++|.+++.     ......+++..+..++.||+.||+|||++|||||||
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDi  237 (413)
T 3dzo_A          158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYL  237 (413)
T ss_dssp             ECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             ccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCc
Confidence            11      111111     23578999999999999985     222345788899999999999999999999999999


Q ss_pred             CCCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhh----------
Q 013973          226 KPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVI----------  295 (433)
Q Consensus       226 Kp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~----------  295 (433)
                      ||+|||++                           .++.+||+|||+++.........+| +.|+|||++          
T Consensus       238 Kp~NILl~---------------------------~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~  289 (413)
T 3dzo_A          238 RPVDIVLD---------------------------QRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQH  289 (413)
T ss_dssp             CGGGEEEC---------------------------TTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGG
T ss_pred             ccceEEEe---------------------------cCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccc
Confidence            99999994                           4455777777777655444445578 999999999          


Q ss_pred             hCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhH
Q 013973          296 LGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESI  375 (433)
Q Consensus       296 ~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  375 (433)
                      .+..|+.++|||||||++|||++|+.||...+..+...                       .+                 
T Consensus       290 ~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~-----------------------~~-----------------  329 (413)
T 3dzo_A          290 HPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSE-----------------------WI-----------------  329 (413)
T ss_dssp             CCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSG-----------------------GG-----------------
T ss_pred             cCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHH-----------------------HH-----------------
Confidence            45568889999999999999999999997644211000                       00                 


Q ss_pred             hhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          376 KSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       376 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                                   ......++.++.+||.+||+.||++|||+.|+++||||++
T Consensus       330 -------------~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~  369 (413)
T 3dzo_A          330 -------------FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  369 (413)
T ss_dssp             -------------GSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             -------------HhhcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHH
Confidence                         0011245678999999999999999999999999999964

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.9e-43  Score=347.35  Aligned_cols=245  Identities=18%  Similarity=0.220  Sum_probs=186.3

Q ss_pred             cEEEEeeeeccccEEEEEEEECCC---CeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEeccee-ecCC
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRER---KEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF-DYRN  171 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~---~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~-~~~~  171 (433)
                      .|++.+.||+|+||.||+|.+..+   +..||+|.++..  ....+.+..|+.+++++     .|+||+++++++ ...+
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~~~~~~~~~~~  164 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-----SHPNVLSLLGICLRSEG  164 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTC-----CCTTBCCCCEEECCCSS
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhC-----CCCCcceEEEEEEcCCC
Confidence            589999999999999999987543   346899998642  23456677888888777     679999999975 5567


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      ..++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++|||||||||+|||++.++              
T Consensus       165 ~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~--------------  229 (373)
T 3c1x_A          165 SPLVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF--------------  229 (373)
T ss_dssp             CCEEEEECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC--------------
T ss_pred             CeEEEEECCCCCCHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCC--------------
Confidence            889999999 889999997654 4689999999999999999999999999999999999996554              


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCC-------CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPD-------QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEAL  322 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~P  322 (433)
                                   .+||+|||++......       .....||+.|+|||++.+..++.++|||||||++|||++ |.+|
T Consensus       230 -------------~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p  296 (373)
T 3c1x_A          230 -------------TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP  296 (373)
T ss_dssp             -------------CEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             -------------CEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCC
Confidence                         4555555555432211       122357889999999999999999999999999999999 7888


Q ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHH
Q 013973          323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHL  402 (433)
Q Consensus       323 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  402 (433)
                      |...+..+....+.                       .+...                         ..+..++.++.+|
T Consensus       297 ~~~~~~~~~~~~~~-----------------------~~~~~-------------------------~~p~~~~~~l~~l  328 (373)
T 3c1x_A          297 YPDVNTFDITVYLL-----------------------QGRRL-------------------------LQPEYCPDPLYEV  328 (373)
T ss_dssp             CTTSCSSCHHHHHH-----------------------TTCCC-------------------------CCCTTCCHHHHHH
T ss_pred             CCCCCHHHHHHHHH-----------------------cCCCC-------------------------CCCCCCCHHHHHH
Confidence            87655433322211                       11000                         0123466789999


Q ss_pred             HHhccccCCCCCCCHHHHhcC
Q 013973          403 LQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       403 i~~~L~~dP~~R~ta~ell~h  423 (433)
                      |.+||+.||++|||+.|++++
T Consensus       329 i~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          329 MLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999999864

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=8.6e-44  Score=343.18  Aligned_cols=271  Identities=19%  Similarity=0.213  Sum_probs=197.4

Q ss_pred             cCceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchh--hHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           91 LGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK--YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        91 ~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      ......++|++.+.||+|+||.||+|.+. +++.||||++.....  ....+..|+.+++.+     .|+||+++++++.
T Consensus        24 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~   97 (326)
T 3uim_A           24 ELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMA-----VHRNLLRLRGFCM   97 (326)
T ss_dssp             HHHTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTC-----CCTTBCCCCEEEC
T ss_pred             HHHHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhc-----cCCCccceEEEEe
Confidence            33445678999999999999999999854 678899999874321  122467788887766     6799999999999


Q ss_pred             cCCeEEEEEecC-CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCCCceEeeccCccccCC
Q 013973          169 YRNHICIVFEKL-GSSLYDFLRKNNY--RSFPIDLVREIARQLLECIAFMHDL---CMIHTDLKPENVLLVSSEYIKVPD  242 (433)
Q Consensus       169 ~~~~~~lV~e~~-~~~L~~~l~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlKp~NILl~~~~~~~i~d  242 (433)
                      ..+..++||||+ +++|.+++.....  ..+++..+..++.||+.||+|||++   ||+||||||+|||++.        
T Consensus        98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~--------  169 (326)
T 3uim_A           98 TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDE--------  169 (326)
T ss_dssp             CSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECT--------
T ss_pred             cCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECC--------
Confidence            999999999999 8899999986532  3499999999999999999999999   9999999999999954        


Q ss_pred             CcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh
Q 013973          243 YKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT  318 (433)
Q Consensus       243 fg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt  318 (433)
                                         ++.+||+|||++.......    ....||+.|+|||++.+..++.++|||||||++|+|++
T Consensus       170 -------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  230 (326)
T 3uim_A          170 -------------------EFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT  230 (326)
T ss_dssp             -------------------TCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHH
T ss_pred             -------------------CCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHh
Confidence                               4566777777665433222    22458999999999999899999999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhH
Q 013973          319 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  398 (433)
Q Consensus       319 g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (433)
                      |..||......          .........    ................                ...........+.+
T Consensus       231 g~~pf~~~~~~----------~~~~~~~~~----~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~  280 (326)
T 3uim_A          231 GQRAFDLARLA----------NDDDVMLLD----WVKGLLKEKKLEALVD----------------VDLQGNYKDEEVEQ  280 (326)
T ss_dssp             CCCSBCHHHHT----------TTSCSBHHH----HHTTTTSSCCSTTSSC----------------TTCTTSCCHHHHHH
T ss_pred             CCCcccccccc----------cccchhHHH----HHHHHhhchhhhhhcC----------------hhhccccCHHHHHH
Confidence            99999621100          000000000    0000000000000000                00001112234568


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhcCC
Q 013973          399 LTHLLQGLLRYDPTDRLTAREALRHP  424 (433)
Q Consensus       399 ~~~li~~~L~~dP~~R~ta~ell~hp  424 (433)
                      +.+|+.+||+.||.+|||+.||++|-
T Consensus       281 l~~li~~cl~~dP~~Rps~~ell~~L  306 (326)
T 3uim_A          281 LIQVALLCTQSSPMERPKMSEVVRML  306 (326)
T ss_dssp             HHHHHHHHTCSCGGGSCCHHHHHHHH
T ss_pred             HHHHHHHHhCcCCccCCCHHHHHHHh
Confidence            99999999999999999999999873

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=1.6e-44  Score=374.26  Aligned_cols=279  Identities=24%  Similarity=0.324  Sum_probs=205.3

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec----
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY----  169 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~----  169 (433)
                      .++|++.+.||+|+||.||+|.+..+|+.||||+++..  ....+.+..|+.+++.+     .|+||+.+++++..    
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L-----~HpnIV~l~~v~~~~~~~   87 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL-----NHPNVVSAREVPDGLQKL   87 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHC-----CBTTBCCEEECCTTTCCC
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhC-----CCCCCCceeeeecccccc
Confidence            47799999999999999999999999999999998642  34456678899999998     67899999888765    


Q ss_pred             --CCeEEEEEecC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcC
Q 013973          170 --RNHICIVFEKL-GSSLYDFLRKNN-YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  245 (433)
Q Consensus       170 --~~~~~lV~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~  245 (433)
                        .+..|+||||+ |++|.+++.... ...+++..+..++.||+.||+|||+.|||||||||+|||++.++         
T Consensus        88 ~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g---------  158 (676)
T 3qa8_A           88 APNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGP---------  158 (676)
T ss_dssp             CTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCS---------
T ss_pred             cCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCC---------
Confidence              77889999999 999999998643 23699999999999999999999999999999999999996543         


Q ss_pred             CCCCCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 013973          246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF  323 (433)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf  323 (433)
                                     ....+||+|||.+.......  ....||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       159 ---------------~~~~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf  223 (676)
T 3qa8_A          159 ---------------QRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF  223 (676)
T ss_dssp             ---------------SSCEEEECSCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSC
T ss_pred             ---------------CceeEEEcccccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCC
Confidence                           22347888888876544332  3357999999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      ..........      .........   .....-...+...++.....                .......++..+.+||
T Consensus       224 ~~~~~~~~~~------~~i~~~~~~---~~~~~~~l~g~~~~~~~lp~----------------p~~l~~~ls~~L~dLI  278 (676)
T 3qa8_A          224 LPNWQPVQWH------GKVREKSNE---HIVVYDDLTGAVKFSSVLPT----------------PNHLSGILAGKLERWL  278 (676)
T ss_dssp             CSSCHHHHSS------TTCC---------CCSCCCCSSSCCCCSSSCC----------------SCCCCGGGHHHHHHHH
T ss_pred             Ccccchhhhh------hhhhcccch---hhhhhhhhccccccccccCC----------------chhhchhhhHHHHHHH
Confidence            7654322110      000000000   00000001111222111100                0112234678899999


Q ss_pred             HhccccCCCCCCCHHHHhcCCCCCC
Q 013973          404 QGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      .+||+.||++|||+.|+++||||+.
T Consensus       279 ~~mL~~DP~kRPTa~elL~hp~F~~  303 (676)
T 3qa8_A          279 QCMLMWHQRQRGTDPQNPNVGCFQA  303 (676)
T ss_dssp             HHHSCSSCC---CCTTCCCCTTHHH
T ss_pred             HHHccCCHhhCcCHHHHhcCHHHHH
Confidence            9999999999999999999999963

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=7.4e-43  Score=335.79  Aligned_cols=260  Identities=25%  Similarity=0.352  Sum_probs=194.6

Q ss_pred             ecCcE-EEEeeeeccccEEEEEEE----ECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEeccee
Q 013973           95 LTSRY-KIHSKMGEGTFGQVLECW----DRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF  167 (433)
Q Consensus        95 ~~~~~-~~~~~iG~G~~g~V~~~~----~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~  167 (433)
                      +.++| ++++.||+|+||.||+|.    +..+++.||||+++..  ......+..|+.+++.+     .|+||+++++++
T Consensus        28 ~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~  102 (318)
T 3lxp_A           28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL-----YHEHIIKYKGCC  102 (318)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEE
T ss_pred             ecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhC-----CCcchhhEEEEE
Confidence            34445 999999999999998775    3457899999999743  24456678899999998     578999999999


Q ss_pred             ec--CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCc
Q 013973          168 DY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  244 (433)
Q Consensus       168 ~~--~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg  244 (433)
                      .+  ...+++||||+ +++|.+++...   .+++..+..++.||+.||.|||++||+||||||+|||++.          
T Consensus       103 ~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~----------  169 (318)
T 3lxp_A          103 EDAGAASLQLVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDN----------  169 (318)
T ss_dssp             EETTTTEEEEEECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT----------
T ss_pred             ecCCCceEEEEEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcC----------
Confidence            87  46899999999 88999999765   4999999999999999999999999999999999999954          


Q ss_pred             CCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC------CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh
Q 013973          245 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT  318 (433)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt  318 (433)
                                       ++.+||+|||.+.......      ....||..|+|||++.+..++.++||||||+++|+|++
T Consensus       170 -----------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~  232 (318)
T 3lxp_A          170 -----------------DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT  232 (318)
T ss_dssp             -----------------TCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHT
T ss_pred             -----------------CCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHh
Confidence                             4456666666665443322      22357888999999999899999999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhH
Q 013973          319 GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD  398 (433)
Q Consensus       319 g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (433)
                      |..||.......     ....+........   ......+..+.                         ....+..++.+
T Consensus       233 g~~p~~~~~~~~-----~~~~~~~~~~~~~---~~~~~~~~~~~-------------------------~~~~~~~~~~~  279 (318)
T 3lxp_A          233 HCDSSQSPPTKF-----LELIGIAQGQMTV---LRLTELLERGE-------------------------RLPRPDKCPAE  279 (318)
T ss_dssp             TTCGGGSHHHHH-----HHHHCSCCHHHHH---HHHHHHHHTTC-------------------------CCCCCTTCCHH
T ss_pred             CCCcccccchhh-----hhhhcccccchhH---HHHHHHHhccc-------------------------CCCCCccccHH
Confidence            999997532211     0011111100000   00000111110                         01123466789


Q ss_pred             HHHHHHhccccCCCCCCCHHHHhc
Q 013973          399 LTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       399 ~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                      +.+||.+||+.||++|||+.|+++
T Consensus       280 l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          280 VYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCCCcccCcCHHHHHH
Confidence            999999999999999999999985

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=1.1e-42  Score=334.00  Aligned_cols=249  Identities=21%  Similarity=0.288  Sum_probs=191.3

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeec-chhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee----cC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRG-IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD----YR  170 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~-~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~----~~  170 (433)
                      .++|++.+.||+|+||.||+|.+..+++.||||++.. .....+.+..|+.+++.+     .|+||+++++++.    ..
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~  102 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLF-----NHPNILRLVAYCLRERGAK  102 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTC-----CCTTBCCCCEEEEEEETTE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhc-----CCCCeeeEEEEEEeccCCC
Confidence            3579999999999999999999999999999998853 334456677899988887     6789999999886    34


Q ss_pred             CeEEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                      ...++||||+ +++|.+++...  ....+++..+..++.||+.||.|||++||+||||||+|||++.             
T Consensus       103 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~-------------  169 (317)
T 2buj_A          103 HEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGD-------------  169 (317)
T ss_dssp             EEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT-------------
T ss_pred             ceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC-------------
Confidence            5899999999 88999998762  2347999999999999999999999999999999999999954             


Q ss_pred             CCCCCCcccccCCCCCCEEEEecCCccccCCCC------------CceeecCcccchhhhhCCC---CCCcchhHHHHHH
Q 013973          248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------------NYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCI  312 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------------~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGv~  312 (433)
                                    ++.+||+|||.+.......            ....||+.|+|||++.+..   ++.++||||||++
T Consensus       170 --------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~i  235 (317)
T 2buj_A          170 --------------EGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCV  235 (317)
T ss_dssp             --------------TSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHH
T ss_pred             --------------CCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHH
Confidence                          4456666666654332110            1235799999999997654   6899999999999


Q ss_pred             HHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhh
Q 013973          313 LVELCTGEALFQTHENLE-HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH  391 (433)
Q Consensus       313 l~elltg~~Pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (433)
                      +|+|++|..||....... ....                      .+.. ....+                        .
T Consensus       236 l~el~~g~~p~~~~~~~~~~~~~----------------------~~~~-~~~~~------------------------~  268 (317)
T 2buj_A          236 LYAMMFGEGPYDMVFQKGDSVAL----------------------AVQN-QLSIP------------------------Q  268 (317)
T ss_dssp             HHHHHHSSCTTHHHHHTTSCHHH----------------------HHHC-C--CC------------------------C
T ss_pred             HHHHHhCCCChhhhhcccchhhH----------------------Hhhc-cCCCC------------------------c
Confidence            999999999995210000 0000                      0000 00000                        1


Q ss_pred             cCCchhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          392 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       392 ~~~~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                      ...++.++.+||.+||+.||.+|||+.|+++|
T Consensus       269 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          269 SPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence            13567789999999999999999999999876

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=1.3e-42  Score=363.29  Aligned_cols=242  Identities=23%  Similarity=0.353  Sum_probs=191.8

Q ss_pred             cEEEE-eeeeccccEEEEEEEE--CCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           98 RYKIH-SKMGEGTFGQVLECWD--RERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        98 ~~~~~-~~iG~G~~g~V~~~~~--~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      .+.+. ++||+|+||.||+|.+  +.+++.||||+++...   ...+.+..|+.+++++     .|+||++++++++. +
T Consensus       369 ~~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~l~~~~~~-~  442 (635)
T 4fl3_A          369 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-----DNPYIVRMIGICEA-E  442 (635)
T ss_dssp             GEEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHC-----CCTTBCCEEEEEES-S
T ss_pred             hccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEec-C
Confidence            34443 4899999999999954  5667899999997432   2356788999999998     67999999999865 5


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .++|||||+ +++|.+++....  .+++..+..++.||+.||+|||++|||||||||+|||++.++.             
T Consensus       443 ~~~lv~E~~~~g~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~-------------  507 (635)
T 4fl3_A          443 SWMLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY-------------  507 (635)
T ss_dssp             SEEEEEECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTE-------------
T ss_pred             CEEEEEEccCCCCHHHHHhhCC--CCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCC-------------
Confidence            588999999 899999998754  7999999999999999999999999999999999999976555             


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCC------CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCC
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALF  323 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf  323 (433)
                                    +||+|||+++......      ....||+.|+|||++.+..++.++|||||||++|||++ |..||
T Consensus       508 --------------~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf  573 (635)
T 4fl3_A          508 --------------AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY  573 (635)
T ss_dssp             --------------EEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSS
T ss_pred             --------------EEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence                          4555555544332211      12356889999999999999999999999999999998 99999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      .+.+..+....+....                      ..                          ..+..++.++.+||
T Consensus       574 ~~~~~~~~~~~i~~~~----------------------~~--------------------------~~p~~~~~~l~~li  605 (635)
T 4fl3_A          574 RGMKGSEVTAMLEKGE----------------------RM--------------------------GCPAGCPREMYDLM  605 (635)
T ss_dssp             TTCCHHHHHHHHHTTC----------------------CC--------------------------CCCTTCCHHHHHHH
T ss_pred             CCCCHHHHHHHHHcCC----------------------CC--------------------------CCCCCCCHHHHHHH
Confidence            9877766544332210                      00                          11235678899999


Q ss_pred             HhccccCCCCCCCHHHHhc
Q 013973          404 QGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~  422 (433)
                      .+||+.||++|||+++|++
T Consensus       606 ~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          606 NLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             HHHTCSSTTTSCCHHHHHH
T ss_pred             HHHcCCCHhHCcCHHHHHH
Confidence            9999999999999999875

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=5.7e-43  Score=331.58  Aligned_cols=247  Identities=20%  Similarity=0.262  Sum_probs=187.4

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECC-CC--eEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRE-RK--EMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~-~~--~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      .++|++.+.||+|+||.||+|.+.. ++  ..||+|+++..    ....+.+..|+.+++.+     .|+||+++++++.
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~   91 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-----DHRNLIRLYGVVL   91 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEC
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhC-----CCCCcccEEEEEc
Confidence            3679999999999999999998643 33  36999988642    23446677899999888     6789999999988


Q ss_pred             cCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC
Q 013973          169 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       169 ~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                      ... .++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||   
T Consensus        92 ~~~-~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg---  166 (291)
T 1u46_A           92 TPP-MKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFG---  166 (291)
T ss_dssp             SSS-CEEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCT---
T ss_pred             cCC-ceeeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEcccc---
Confidence            765 88999999 899999998653 369999999999999999999999999999999999999766655555554   


Q ss_pred             CCCCCCcccccCCCCCCEEEEecCCccccCCCC------CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CC
Q 013973          248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GE  320 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~  320 (433)
                                              .+.......      ....||..|+|||++.+..++.++||||||+++|+|++ |.
T Consensus       167 ------------------------~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~  222 (291)
T 1u46_A          167 ------------------------LMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ  222 (291)
T ss_dssp             ------------------------TCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSC
T ss_pred             ------------------------ccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence                                    443322211      12357889999999999889999999999999999999 99


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHH
Q 013973          321 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  400 (433)
Q Consensus       321 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (433)
                      .||.+.+..+....+......                       .+                        .+..++.++.
T Consensus       223 ~p~~~~~~~~~~~~~~~~~~~-----------------------~~------------------------~~~~~~~~l~  255 (291)
T 1u46_A          223 EPWIGLNGSQILHKIDKEGER-----------------------LP------------------------RPEDCPQDIY  255 (291)
T ss_dssp             CTTTTCCHHHHHHHHHTSCCC-----------------------CC------------------------CCTTCCHHHH
T ss_pred             CCcccCCHHHHHHHHHccCCC-----------------------CC------------------------CCcCcCHHHH
Confidence            999887765544332211000                       00                        1235677899


Q ss_pred             HHHHhccccCCCCCCCHHHHhcC
Q 013973          401 HLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       401 ~li~~~L~~dP~~R~ta~ell~h  423 (433)
                      ++|.+||+.||++|||+.+++++
T Consensus       256 ~li~~~l~~~p~~Rps~~~l~~~  278 (291)
T 1u46_A          256 NVMVQCWAHKPEDRPTFVALRDF  278 (291)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHccCCcccCcCHHHHHHH
Confidence            99999999999999999999863

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=4.7e-43  Score=335.03  Aligned_cols=255  Identities=24%  Similarity=0.337  Sum_probs=191.6

Q ss_pred             EEEeeeeccccEEEEEEEECCCCeEEEEEEeecc-----hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973          100 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus       100 ~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ...+.||+|+||.||+|.+  +++.||+|++...     ....+.+..|+.+++.+     .|+||+++++++...+..+
T Consensus        34 ~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~  106 (307)
T 2nru_A           34 VGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC-----QHENLVELLGFSSDGDDLC  106 (307)
T ss_dssp             TTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHC-----CCTTBCCEEEEECSSSSCE
T ss_pred             ccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhc-----CCCCeEEEEEEEecCCceE
Confidence            3448999999999999986  5778999998632     23456678899999988     6789999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNN-YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      +||||+ +++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||++.                  
T Consensus       107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~------------------  168 (307)
T 2nru_A          107 LVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDE------------------  168 (307)
T ss_dssp             EEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT------------------
T ss_pred             EEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcC------------------
Confidence            999999 899999997432 246999999999999999999999999999999999999954                  


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE  327 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~  327 (433)
                               ++.+||+|||.+.......     ....||+.|+|||++.+ .++.++||||||+++|+|++|..||....
T Consensus       169 ---------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~  238 (307)
T 2nru_A          169 ---------AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHR  238 (307)
T ss_dssp             ---------TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTB
T ss_pred             ---------CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCc
Confidence                     4456666666655433211     23478999999999876 58899999999999999999999998654


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ..+....+.........        ....++....                          .......+..+.+++.+||
T Consensus       239 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~--------------------------~~~~~~~~~~l~~li~~cl  284 (307)
T 2nru_A          239 EPQLLLDIKEEIEDEEK--------TIEDYIDKKM--------------------------NDADSTSVEAMYSVASQCL  284 (307)
T ss_dssp             SSSBTTHHHHHHHTTSC--------CHHHHSCSSC--------------------------SCCCHHHHHHHHHHHHHHT
T ss_pred             chHHHHHHHHHhhhhhh--------hhhhhccccc--------------------------cccchHHHHHHHHHHHHHc
Confidence            43222221111100000        0000010000                          0011234567899999999


Q ss_pred             ccCCCCCCCHHHHhcC
Q 013973          408 RYDPTDRLTAREALRH  423 (433)
Q Consensus       408 ~~dP~~R~ta~ell~h  423 (433)
                      +.||.+|||+.+++++
T Consensus       285 ~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          285 HEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             CSSTTTSCCHHHHHHH
T ss_pred             CCCcccCcCHHHHHHH
Confidence            9999999999999864

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=1.1e-42  Score=337.47  Aligned_cols=255  Identities=20%  Similarity=0.275  Sum_probs=192.4

Q ss_pred             eecCceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           89 FALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        89 ~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      +..+..+.++|++.+.||+|+||.||+|.+  +++.||||++...  ....+..|.+++..+.   ..|+||+++++++.
T Consensus        34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~e~~~~~~~~---l~h~ni~~~~~~~~  106 (342)
T 1b6c_B           34 LLVQRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR--EERSWFREAEIYQTVM---LRHENILGFIAADN  106 (342)
T ss_dssp             HHHHHHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG--GHHHHHHHHHHHHHSC---CCCTTBCCEEEEEE
T ss_pred             eeecccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch--hHHHHHHHHHHHHHhh---cCCCcEEEEEeeec
Confidence            344455667899999999999999999987  5889999999743  3455677888877642   26789999999988


Q ss_pred             cCC----eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH--------HCCceeccCCCCceEeecc
Q 013973          169 YRN----HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH--------DLCMIHTDLKPENVLLVSS  235 (433)
Q Consensus       169 ~~~----~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH--------~~~ivHrDlKp~NILl~~~  235 (433)
                      ...    .+++||||+ +++|.+++...   .+++..+..++.||+.||.|||        +.|||||||||+|||++.+
T Consensus       107 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~  183 (342)
T 1b6c_B          107 KDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN  183 (342)
T ss_dssp             CCCSSCCCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTT
T ss_pred             ccCCccceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCC
Confidence            765    899999999 88999999864   5999999999999999999999        8999999999999999544


Q ss_pred             CccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-------CceeecCcccchhhhhCCC------CCC
Q 013973          236 EYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-------NYIVSTRHYRAPEVILGLG------WTY  302 (433)
Q Consensus       236 ~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~gt~~y~aPE~~~~~~------~~~  302 (433)
                                                 +.+||+|||++.......       ....||+.|+|||++.+..      ++.
T Consensus       184 ---------------------------~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  236 (342)
T 1b6c_B          184 ---------------------------GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFK  236 (342)
T ss_dssp             ---------------------------SCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHH
T ss_pred             ---------------------------CCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCC
Confidence                                       456666666664433221       2347999999999998763      336


Q ss_pred             cchhHHHHHHHHHHHhC----------CCCCCCCCh----HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcc--cCC
Q 013973          303 PCDIWSVGCILVELCTG----------EALFQTHEN----LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRL--DWP  366 (433)
Q Consensus       303 ~~DvwSlGv~l~elltg----------~~Pf~~~~~----~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~  366 (433)
                      ++|||||||++|||++|          ..||.....    .+.....                      +....+  ..+
T Consensus       237 ~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~  294 (342)
T 1b6c_B          237 RADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKV----------------------VCEQKLRPNIP  294 (342)
T ss_dssp             HHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHH----------------------HTTSCCCCCCC
T ss_pred             cccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHH----------------------HHHHHhCCCCc
Confidence            89999999999999999          778865321    1111100                      000000  000


Q ss_pred             CCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          367 EGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                      ...                     .....+..+.+||.+||+.||++|||+.|+++|
T Consensus       295 ~~~---------------------~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          295 NRW---------------------QSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             GGG---------------------GTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             ccc---------------------cchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence            000                     011334578999999999999999999999875

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=1e-41  Score=328.91  Aligned_cols=261  Identities=21%  Similarity=0.309  Sum_probs=194.1

Q ss_pred             cCcEEEEeeeeccccEEEEEEE----ECCCCeEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECW----DRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~----~~~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      .++|++++.||+|+||.||+|.    +..+++.||+|++... ....+.+..|+.+++.+     .|+||+++++++...
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~  114 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-----QHDNIVKYKGVCYSA  114 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTC-----CCTTBCCEEEEECC-
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhC-----CCCCeeeEEEEEEec
Confidence            3679999999999999999998    4678999999998743 33445678899999888     678999999987654


Q ss_pred             --CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC
Q 013973          171 --NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       171 --~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                        ..+++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||   
T Consensus       115 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg---  190 (326)
T 2w1i_A          115 GRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG---  190 (326)
T ss_dssp             ---CCEEEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCT---
T ss_pred             CCCceEEEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCc---
Confidence              4789999999 889999998754 469999999999999999999999999999999999999766655555555   


Q ss_pred             CCCCCCcccccCCCCCCEEEEecCCccccCCCC------CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCC
Q 013973          248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEA  321 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~  321 (433)
                                              ++.......      ....||..|+|||++.+..++.++||||||+++|+|++|..
T Consensus       191 ------------------------~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~  246 (326)
T 2w1i_A          191 ------------------------LTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE  246 (326)
T ss_dssp             ------------------------TCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTC
T ss_pred             ------------------------chhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCC
Confidence                                    443322211      12356788999999999889999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCH-HHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHH
Q 013973          322 LFQTHENLEHLAMMERVLGPLPQ-HMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  400 (433)
Q Consensus       322 Pf~~~~~~~~~~~i~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (433)
                      ||..... +    .....+.... ....   ......+..+.                         ....+..++.++.
T Consensus       247 ~~~~~~~-~----~~~~~~~~~~~~~~~---~~~~~~~~~~~-------------------------~~~~~~~~~~~l~  293 (326)
T 2w1i_A          247 KSKSPPA-E----FMRMIGNDKQGQMIV---FHLIELLKNNG-------------------------RLPRPDGCPDEIY  293 (326)
T ss_dssp             GGGSHHH-H----HHHHHCTTCCTHHHH---HHHHHHHHTTC-------------------------CCCCCTTCCHHHH
T ss_pred             CCCCCHH-H----HHHhhccccchhhhH---HHHHHHhhcCC-------------------------CCCCCCcccHHHH
Confidence            9864211 1    1111111111 0000   00000011100                         0012345678899


Q ss_pred             HHHHhccccCCCCCCCHHHHhc
Q 013973          401 HLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       401 ~li~~~L~~dP~~R~ta~ell~  422 (433)
                      +||.+||+.||++|||+.|+++
T Consensus       294 ~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          294 MIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHH
Confidence            9999999999999999999875

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=4.9e-44  Score=346.65  Aligned_cols=270  Identities=20%  Similarity=0.251  Sum_probs=191.5

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---------hhHHHHHHHHHHHHHHHhc--------CC----
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---------KYREAAMIEIEVLQQLAKH--------DK----  155 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---------~~~~~~~~E~~~l~~l~~~--------~~----  155 (433)
                      ++|++++.||+|+||+||+|++  +++.||||+++...         ...+.+..|+.+++.+...        .+    
T Consensus        20 ~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           20 EKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             HHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             ccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            5799999999999999999988  67999999997432         1236678899999998631        10    


Q ss_pred             ---------CCCceEEecceeec-------------CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Q 013973          156 ---------GGNRCVQIRNWFDY-------------RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI  212 (433)
Q Consensus       156 ---------~~~~i~~~~~~~~~-------------~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L  212 (433)
                               .|+||+++++++.+             .+.+||||||+ +|++.+.+.+   ..+++..++.++.||+.||
T Consensus        98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL  174 (336)
T 2vuw_A           98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASL  174 (336)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHH
T ss_pred             cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHH
Confidence                     15666666766665             78999999999 7776666643   3689999999999999999


Q ss_pred             HHHH-HCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccc
Q 013973          213 AFMH-DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRA  291 (433)
Q Consensus       213 ~~LH-~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~a  291 (433)
                      +||| ++|||||||||+|||++.++... .+++....      ..........+||+|||+++....  ...+||+.|+|
T Consensus       175 ~~lH~~~~ivHrDlKp~NILl~~~~~~~-~~~~~~~~------~~~~~~~~~~vkL~DFG~a~~~~~--~~~~gt~~y~a  245 (336)
T 2vuw_A          175 AVAEASLRFEHRDLHWGNVLLKKTSLKK-LHYTLNGK------SSTIPSCGLQVSIIDYTLSRLERD--GIVVFCDVSMD  245 (336)
T ss_dssp             HHHHHHHCCBCSCCCGGGEEEEECSCSE-EEEEETTE------EEEEECTTEEEEECCCTTCBEEET--TEEECCCCTTC
T ss_pred             HHHHHhCCEeECCCCHHHEEEeccCCcc-eeeeccCc------cccccCCCceEEEeeccccEecCC--CcEEEeecccC
Confidence            9999 99999999999999998765210 11110000      000001233789999999876543  34589999999


Q ss_pred             hhhhhCCCCCCcchhHHHHHH-HHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCcc
Q 013973          292 PEVILGLGWTYPCDIWSVGCI-LVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAA  370 (433)
Q Consensus       292 PE~~~~~~~~~~~DvwSlGv~-l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  370 (433)
                      ||++.+.. +.++||||||++ .+++++|..||..........  ..                   ......  ++....
T Consensus       246 PE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~--~~-------------------~~~~~~--~~~~~~  301 (336)
T 2vuw_A          246 EDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLT--DK-------------------MLKQMT--FKTKCN  301 (336)
T ss_dssp             SGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHH--HH-------------------HHHTCC--CSSCCC
T ss_pred             hhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHH--Hh-------------------hhhhhc--cCcccc
Confidence            99998766 899999998776 788889999984311101000  00                   000000  000000


Q ss_pred             chhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHh-cCCCCC
Q 013973          371 SRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREAL-RHPFFT  427 (433)
Q Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell-~hp~f~  427 (433)
                                        ...+..+++++.+||.+||++|     ||+|+| +||||+
T Consensus       302 ------------------~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          302 ------------------TPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             ------------------SHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             ------------------hhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence                              0012245778999999999987     999999 999996

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=2.7e-41  Score=354.54  Aligned_cols=251  Identities=24%  Similarity=0.280  Sum_probs=196.6

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCC---CeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRER---KEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~---~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      ...++|++.+.||+|+||.||+|.+..+   +..||+|+++..  ....+.+..|+.+++.+     .|+||+++++++.
T Consensus       387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~HpnIv~l~~~~~  461 (656)
T 2j0j_A          387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF-----DHPHIVKLIGVIT  461 (656)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEC
T ss_pred             cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEe
Confidence            3457899999999999999999998653   467999998642  33446678899999888     6799999999885


Q ss_pred             cCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC
Q 013973          169 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       169 ~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                       .+.+|+||||+ +++|.+++.... ..+++..+..++.||+.||.|||++|||||||||+|||++.++.+||+|||++.
T Consensus       462 -~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~  539 (656)
T 2j0j_A          462 -ENPVWIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR  539 (656)
T ss_dssp             -SSSCEEEEECCTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred             -cCceEEEEEcCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCe
Confidence             46689999999 899999998653 369999999999999999999999999999999999999776655555555443


Q ss_pred             CCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 013973          248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH  326 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~  326 (433)
                      .......                       .......||+.|+|||++.+..++.++|||||||++|||++ |..||.+.
T Consensus       540 ~~~~~~~-----------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~  596 (656)
T 2j0j_A          540 YMEDSTY-----------------------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV  596 (656)
T ss_dssp             SCCC---------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             ecCCCcc-----------------------eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCC
Confidence            3211000                       00112356789999999999999999999999999999997 99999987


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      +..+....+....                      ..                          ..+..++.++.+||.+|
T Consensus       597 ~~~~~~~~i~~~~----------------------~~--------------------------~~~~~~~~~l~~li~~~  628 (656)
T 2j0j_A          597 KNNDVIGRIENGE----------------------RL--------------------------PMPPNCPPTLYSLMTKC  628 (656)
T ss_dssp             CHHHHHHHHHHTC----------------------CC--------------------------CCCTTCCHHHHHHHHHH
T ss_pred             CHHHHHHHHHcCC----------------------CC--------------------------CCCccccHHHHHHHHHH
Confidence            7666544332210                      00                          01235677899999999


Q ss_pred             cccCCCCCCCHHHHhc
Q 013973          407 LRYDPTDRLTAREALR  422 (433)
Q Consensus       407 L~~dP~~R~ta~ell~  422 (433)
                      |+.||++|||+.|+++
T Consensus       629 l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          629 WAYDPSRRPRFTELKA  644 (656)
T ss_dssp             TCSSGGGSCCHHHHHH
T ss_pred             cCCChhHCcCHHHHHH
Confidence            9999999999999975

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=2e-42  Score=332.31  Aligned_cols=243  Identities=21%  Similarity=0.287  Sum_probs=188.9

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      .++|++.+.||+|+||.||+|.+..   .||+|+++...   ...+.+..|+.+++.+     .|+||+++++++...+.
T Consensus        32 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~~  103 (319)
T 2y4i_B           32 FEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQT-----RHENVVLFMGACMSPPH  103 (319)
T ss_dssp             CSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTC-----CCTTBCCCCEEEECSSC
T ss_pred             HHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcC-----CCCCEeEEEEEEecCCc
Confidence            4679999999999999999998864   39999986321   2223455678777776     67899999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++ ++.              
T Consensus       104 ~~iv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~--------------  167 (319)
T 2y4i_B          104 LAIITSLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGK--------------  167 (319)
T ss_dssp             EEEECBCCCSEEHHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---C--------------
T ss_pred             eEEEeecccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCC--------------
Confidence            99999999 899999997643 4699999999999999999999999999999999999995 344              


Q ss_pred             CCcccccCCCCCCEEEEecCCccccC--------CCCCceeecCcccchhhhhC---------CCCCCcchhHHHHHHHH
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYER--------PDQNYIVSTRHYRAPEVILG---------LGWTYPCDIWSVGCILV  314 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~--------~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DvwSlGv~l~  314 (433)
                                   +||+|||++....        .......||+.|+|||++.+         ..++.++|||||||++|
T Consensus       168 -------------~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~  234 (319)
T 2y4i_B          168 -------------VVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWY  234 (319)
T ss_dssp             -------------CEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHH
T ss_pred             -------------EEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHH
Confidence                         5555555543221        11122468999999999975         35789999999999999


Q ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCC
Q 013973          315 ELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH  394 (433)
Q Consensus       315 elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (433)
                      ||++|..||...........+.....+                      ..                         ....
T Consensus       235 el~~g~~p~~~~~~~~~~~~~~~~~~~----------------------~~-------------------------~~~~  267 (319)
T 2y4i_B          235 ELHAREWPFKTQPAEAIIWQMGTGMKP----------------------NL-------------------------SQIG  267 (319)
T ss_dssp             HHHHSSCSSSSCCHHHHHHHHHTTCCC----------------------CC-------------------------CCSS
T ss_pred             HHHhCCCCCCCCCHHHHHHHhccCCCC----------------------CC-------------------------CcCC
Confidence            999999999887665544332211000                      00                         0123


Q ss_pred             chhHHHHHHHhccccCCCCCCCHHHHhc
Q 013973          395 SAGDLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       395 ~~~~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                      ++.++.+||.+||+.||++|||+.++++
T Consensus       268 ~~~~l~~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          268 MGKEISDILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             CCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred             CCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            5668999999999999999999999986

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=1.4e-41  Score=322.02  Aligned_cols=229  Identities=15%  Similarity=0.047  Sum_probs=178.3

Q ss_pred             cCc-eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCCceEEecc
Q 013973           91 LGE-NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN  165 (433)
Q Consensus        91 ~~~-~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~  165 (433)
                      .+. .+.++|++.+.||+|+||.||+|++..+++.||||++...    ......+..|+.++..+     .|+||+++++
T Consensus        24 ~g~~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~hp~iv~~~~   98 (286)
T 3uqc_A           24 PGARIANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI-----DKPGVARVLD   98 (286)
T ss_dssp             TTCEETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTC-----CCTTBCCEEE
T ss_pred             CCCEEecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcC-----CCCCcceeeE
Confidence            344 4567899999999999999999999999999999999743    22335677788887776     7789999999


Q ss_pred             eeecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCc
Q 013973          166 WFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  244 (433)
Q Consensus       166 ~~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg  244 (433)
                      ++.+.+..|+||||+ |++|.+++..    .....++..++.||+.||+|||++||+||||||+|||++.+|        
T Consensus        99 ~~~~~~~~~lv~e~~~g~~L~~~l~~----~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g--------  166 (286)
T 3uqc_A           99 VVHTRAGGLVVAEWIRGGSLQEVADT----SPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDG--------  166 (286)
T ss_dssp             EEEETTEEEEEEECCCEEEHHHHHTT----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTS--------
T ss_pred             EEEECCcEEEEEEecCCCCHHHHHhc----CCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCC--------
Confidence            999999999999999 8899999954    245667889999999999999999999999999999996544        


Q ss_pred             CCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 013973          245 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                                         .+||++                 +.|++|       ++.++|||||||++|||++|+.||.
T Consensus       167 -------------------~~kl~~-----------------~~~~~~-------~~~~~Di~slG~il~elltg~~Pf~  203 (286)
T 3uqc_A          167 -------------------DVVLAY-----------------PATMPD-------ANPQDDIRGIGASLYALLVNRWPLP  203 (286)
T ss_dssp             -------------------CEEECS-----------------CCCCTT-------CCHHHHHHHHHHHHHHHHHSEECSC
T ss_pred             -------------------CEEEEe-----------------ccccCC-------CCchhHHHHHHHHHHHHHHCCCCCC
Confidence                               455542                 234443       7899999999999999999999998


Q ss_pred             CCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHH
Q 013973          325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  404 (433)
Q Consensus       325 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  404 (433)
                      +.+..+.+..                   ....+ .+..                      .........++.++.+||.
T Consensus       204 ~~~~~~~~~~-------------------~~~~~-~~~~----------------------~~~~~~~~~~~~~l~~li~  241 (286)
T 3uqc_A          204 EAGVRSGLAP-------------------AERDT-AGQP----------------------IEPADIDRDIPFQISAVAA  241 (286)
T ss_dssp             CCSBCCCSEE-------------------CCBCT-TSCB----------------------CCHHHHCTTSCHHHHHHHH
T ss_pred             cCCcchhhHH-------------------HHHHh-ccCC----------------------CChhhcccCCCHHHHHHHH
Confidence            7543210000                   00000 0000                      0011223467889999999


Q ss_pred             hccccCCCCCCCHHHHhc
Q 013973          405 GLLRYDPTDRLTAREALR  422 (433)
Q Consensus       405 ~~L~~dP~~R~ta~ell~  422 (433)
                      +||+.||++| |+.|+++
T Consensus       242 ~~l~~dP~~R-s~~el~~  258 (286)
T 3uqc_A          242 RSVQGDGGIR-SASTLLN  258 (286)
T ss_dssp             HHHCTTSSCC-CHHHHHH
T ss_pred             HHcccCCccC-CHHHHHH
Confidence            9999999999 9999876

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.8e-41  Score=357.03  Aligned_cols=244  Identities=25%  Similarity=0.367  Sum_probs=194.3

Q ss_pred             eecCceecCcEEEEeeeeccccEEEEEEEECC-CCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecc
Q 013973           89 FALGENLTSRYKIHSKMGEGTFGQVLECWDRE-RKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN  165 (433)
Q Consensus        89 ~~~~~~~~~~~~~~~~iG~G~~g~V~~~~~~~-~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~  165 (433)
                      +..++.+.++|++.+.||+|+||.||+|.+.. +++.||||++...  ......+..|+.+++.+     .|+||+++++
T Consensus        72 ~~~g~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-----~hp~iv~~~~  146 (681)
T 2pzi_A           72 LNPGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEV-----VHPSIVQIFN  146 (681)
T ss_dssp             SCTTCEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGC-----CCTTBCCEEE
T ss_pred             CCCCCEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhc-----CCCCcCeEee
Confidence            34566778999999999999999999999976 7899999998632  23445667888888777     6799999999


Q ss_pred             eeecCCe-----EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccc
Q 013973          166 WFDYRNH-----ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIK  239 (433)
Q Consensus       166 ~~~~~~~-----~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~  239 (433)
                      ++...+.     .||||||+ |++|.+++..    .+++..+..++.||+.||.|||++|||||||||+|||++.     
T Consensus       147 ~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~-----  217 (681)
T 2pzi_A          147 FVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTE-----  217 (681)
T ss_dssp             EEEEECTTSCEEEEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECS-----
T ss_pred             eEeecCCCCCceeEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeC-----
Confidence            9987655     79999999 8899887754    6999999999999999999999999999999999999942     


Q ss_pred             cCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhC
Q 013973          240 VPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG  319 (433)
Q Consensus       240 i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg  319 (433)
                                             ..+||+|||++...... ...+||+.|+|||++.+. ++.++|||||||++|+|++|
T Consensus       218 -----------------------~~~kl~DFG~a~~~~~~-~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g  272 (681)
T 2pzi_A          218 -----------------------EQLKLIDLGAVSRINSF-GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLD  272 (681)
T ss_dssp             -----------------------SCEEECCCTTCEETTCC-SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSC
T ss_pred             -----------------------CcEEEEecccchhcccC-CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhC
Confidence                                   26888888888765443 445799999999999875 48999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHH
Q 013973          320 EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDL  399 (433)
Q Consensus       320 ~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  399 (433)
                      .+||.+....           ..                       +...            +         ....+..+
T Consensus       273 ~~~~~~~~~~-----------~~-----------------------~~~~------------~---------~~~~~~~l  297 (681)
T 2pzi_A          273 LPTRNGRYVD-----------GL-----------------------PEDD------------P---------VLKTYDSY  297 (681)
T ss_dssp             CCEETTEECS-----------SC-----------------------CTTC------------H---------HHHHCHHH
T ss_pred             CCCCcccccc-----------cc-----------------------cccc------------c---------ccccCHHH
Confidence            9988642100           00                       0000            0         00123578


Q ss_pred             HHHHHhccccCCCCCCCHHHHhcCCCC
Q 013973          400 THLLQGLLRYDPTDRLTAREALRHPFF  426 (433)
Q Consensus       400 ~~li~~~L~~dP~~R~ta~ell~hp~f  426 (433)
                      .+||.+||+.||++||++.+.+.|+|+
T Consensus       298 ~~li~~~l~~dP~~R~~~~~~l~~~l~  324 (681)
T 2pzi_A          298 GRLLRRAIDPDPRQRFTTAEEMSAQLT  324 (681)
T ss_dssp             HHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred             HHHHhhhccCChhhCCCHHHHHHHHHH
Confidence            999999999999999998888888775

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=100.00  E-value=1.1e-34  Score=299.23  Aligned_cols=185  Identities=19%  Similarity=0.122  Sum_probs=126.8

Q ss_pred             EEeeeeccccEEEEEEEECCCCeEEEEEEeecc-----------hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973          101 IHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-----------KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus       101 ~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----------~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      ....++.|+.|.+..++....|+.||+|++.+.           ....+.+.+|+++|+++.    .|+||+++++++++
T Consensus       238 w~~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~----~~~~i~~~~~~~ed  313 (569)
T 4azs_A          238 WQNQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPP----AGFDAPAVLAHGEN  313 (569)
T ss_dssp             EECC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCC----TTCCCCCEEEEEEC
T ss_pred             hhhccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcC----CCCCeeEEEEEEEE
Confidence            334677888888888888888999999999632           233456778999988773    56789999999999


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      ++.+||||||+ |++|.++|...+  ++++.   .|+.||+.||+|||++|||||||||+||||+.              
T Consensus       314 ~~~~yLVMEyv~G~~L~d~i~~~~--~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~--------------  374 (569)
T 4azs_A          314 AQSGWLVMEKLPGRLLSDMLAAGE--EIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDA--------------  374 (569)
T ss_dssp             SSEEEEEEECCCSEEHHHHHHTTC--CCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECT--------------
T ss_pred             CCEEEEEEecCCCCcHHHHHHhCC--CCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECC--------------
Confidence            99999999999 999999998765  67764   58899999999999999999999999999954              


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL  322 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~P  322 (433)
                                   ++.+||+|||+|+.....   ....+||+.|||||++.+ .+..++|+||+|++++++.++..+
T Consensus       375 -------------dg~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          375 -------------RQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             -------------TSCEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred             -------------CCCEEEeecccCeeCCCCCccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence                         456777777776544332   234689999999999976 467889999999999887766443

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.95  E-value=2.4e-28  Score=250.50  Aligned_cols=179  Identities=19%  Similarity=0.160  Sum_probs=137.4

Q ss_pred             EEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---------hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973          100 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus       100 ~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---------~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      ...+.||+|+||.||+|.  ..++.+|+|......         ...+.+.+|+.+++++     .|+||+.+..++...
T Consensus       339 ~~~~~LG~G~fg~Vy~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-----~h~nIv~~~~~~~~~  411 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDS--YLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALV-----KDFGIPAPYIFDVDL  411 (540)
T ss_dssp             ---------CCEEEEEEE--CSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHG-----GGGTCCCCCEEEEET
T ss_pred             CCCCEEeeCCCEEEEEEE--ECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhc-----CCCCcCceEEEEEeC
Confidence            446799999999999994  456778999764211         1134468899999999     457788555555566


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      +..||||||+ |++|.+++..          +..++.||+.||+|||++|||||||||+|||++                
T Consensus       412 ~~~~lVmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~----------------  465 (540)
T 3en9_A          412 DNKRIMMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFD----------------  465 (540)
T ss_dssp             TTTEEEEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEES----------------
T ss_pred             CccEEEEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEEC----------------
Confidence            7779999999 8999999865          568999999999999999999999999999993                


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCC----------CceeecCcccchhhhhC--CCCCCcchhHHHHHHHHHHH
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ----------NYIVSTRHYRAPEVILG--LGWTYPCDIWSVGCILVELC  317 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----------~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGv~l~ell  317 (433)
                                 .  .+||+|||+++......          ...+||+.|||||++..  ..|+..+|+||..+-..+-+
T Consensus       466 -----------~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v  532 (540)
T 3en9_A          466 -----------K--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDV  532 (540)
T ss_dssp             -----------S--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHH
T ss_pred             -----------C--eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence                       3  78888888887665432          24589999999999987  67888999999999888888


Q ss_pred             hCCCCCC
Q 013973          318 TGEALFQ  324 (433)
Q Consensus       318 tg~~Pf~  324 (433)
                      .++.+|.
T Consensus       533 ~~r~rY~  539 (540)
T 3en9_A          533 ERRARYV  539 (540)
T ss_dssp             HTCSCCC
T ss_pred             HhccccC
Confidence            8877764

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.92  E-value=6.4e-26  Score=213.75  Aligned_cols=154  Identities=23%  Similarity=0.301  Sum_probs=118.0

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-------------------hhHHHHHHHHHHHHHHHhcCCCCC
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-------------------KYREAAMIEIEVLQQLAKHDKGGN  158 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-------------------~~~~~~~~E~~~l~~l~~~~~~~~  158 (433)
                      .|.+.+.||+|+||.||+|.+ .+|+.||+|+++...                   .....+..|+.+++.+.       
T Consensus        91 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-------  162 (282)
T 1zar_A           91 VDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-------  162 (282)
T ss_dssp             CSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-------
T ss_pred             EEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-------
Confidence            356679999999999999999 889999999986321                   13456778999999984       


Q ss_pred             ceEEecceeecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCc
Q 013973          159 RCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEY  237 (433)
Q Consensus       159 ~i~~~~~~~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~  237 (433)
                      | +.+.+.+.. +..|+||||+ |++|.+ +.      .  .....++.||+.||.|||++|||||||||+|||++    
T Consensus       163 ~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~------~--~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~----  227 (282)
T 1zar_A          163 G-LAVPKVYAW-EGNAVLMELIDAKELYR-VR------V--ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS----  227 (282)
T ss_dssp             T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CC------C--SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE----
T ss_pred             C-CCcCeEEec-cceEEEEEecCCCcHHH-cc------h--hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE----
Confidence            2 333444433 4569999999 889977 41      1  23557999999999999999999999999999994    


Q ss_pred             cccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhC----------CCCCCcchhH
Q 013973          238 IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG----------LGWTYPCDIW  307 (433)
Q Consensus       238 ~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~----------~~~~~~~Dvw  307 (433)
                                              ++.+||+|||+++          ++..|+|||++..          ..|+..+|+|
T Consensus       228 ------------------------~~~vkl~DFG~a~----------~~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~  273 (282)
T 1zar_A          228 ------------------------EEGIWIIDFPQSV----------EVGEEGWREILERDVRNIITYFSRTYRTEKDIN  273 (282)
T ss_dssp             ------------------------TTEEEECCCTTCE----------ETTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_pred             ------------------------CCcEEEEECCCCe----------ECCCCCHHHHHHHHHHHHHHHHHHhcCCCCChH
Confidence                                    4567888888775          4566899999864          3456666666


Q ss_pred             H
Q 013973          308 S  308 (433)
Q Consensus       308 S  308 (433)
                      .
T Consensus       274 ~  274 (282)
T 1zar_A          274 S  274 (282)
T ss_dssp             H
T ss_pred             H
Confidence            5

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.88  E-value=3.3e-22  Score=185.97  Aligned_cols=137  Identities=16%  Similarity=0.131  Sum_probs=106.6

Q ss_pred             EEEEeeeeccccEEEEEEEECCCCeE--EEEEEeecchh-------------------------hHHHHHHHHHHHHHHH
Q 013973           99 YKIHSKMGEGTFGQVLECWDRERKEM--VAIKIVRGIKK-------------------------YREAAMIEIEVLQQLA  151 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~~~~--vAiK~~~~~~~-------------------------~~~~~~~E~~~l~~l~  151 (433)
                      |++.+.||+|+||.||+|.+..+|+.  ||||+++....                         ....+..|+.++..+.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            78999999999999999998778888  99998753211                         1135678999999998


Q ss_pred             hcCCCCCceEEecceeecCCeEEEEEecCC--C----CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-HCCceecc
Q 013973          152 KHDKGGNRCVQIRNWFDYRNHICIVFEKLG--S----SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH-DLCMIHTD  224 (433)
Q Consensus       152 ~~~~~~~~i~~~~~~~~~~~~~~lV~e~~~--~----~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH-~~~ivHrD  224 (433)
                      +.....|.++..       +..+|||||++  |    +|.++...     .++..+..++.||+.||.||| +.||||||
T Consensus       129 ~~~i~~p~~~~~-------~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~givHrD  196 (258)
T 1zth_A          129 EAGVSVPQPYTY-------MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAELVHAD  196 (258)
T ss_dssp             HTTCCCCCEEEE-------ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSCEECSS
T ss_pred             hCCCCCCeEEEc-------CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCCEEeCC
Confidence            764444444332       34689999994  3    67766432     335567899999999999999 99999999


Q ss_pred             CCCCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCcccc
Q 013973          225 LKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE  276 (433)
Q Consensus       225 lKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~  276 (433)
                      |||+|||+                           +.  .++|+|||++...
T Consensus       197 lkp~NILl---------------------------~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          197 LSEYNIMY---------------------------ID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             CSTTSEEE---------------------------SS--SEEECCCTTCEET
T ss_pred             CCHHHEEE---------------------------cC--cEEEEECcccccC
Confidence            99999999                           33  6899999988643

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.76  E-value=2.4e-18  Score=166.85  Aligned_cols=144  Identities=17%  Similarity=0.180  Sum_probs=99.7

Q ss_pred             EEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-----------------------hhHHHHHHHHHHHHHHHhcCC
Q 013973           99 YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-----------------------KYREAAMIEIEVLQQLAKHDK  155 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-----------------------~~~~~~~~E~~~l~~l~~~~~  155 (433)
                      |++.+.||+|+||.||+|.+. +|+.||||+++...                       ..+.....|...|.++.....
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv  175 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF  175 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            899999999999999999985 58889999875210                       001123457788888865443


Q ss_pred             CCCceEEecceeecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeec
Q 013973          156 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVS  234 (433)
Q Consensus       156 ~~~~i~~~~~~~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~  234 (433)
                      ..+..   +.   ... .+|||||+ |+.|.++        .....+..++.||+.+|.|||+.|||||||||.|||++.
T Consensus       176 ~vp~p---~~---~~~-~~LVME~i~G~~L~~l--------~~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~  240 (397)
T 4gyi_A          176 PVPEP---IA---QSR-HTIVMSLVDALPMRQV--------SSVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIRE  240 (397)
T ss_dssp             SCCCE---EE---EET-TEEEEECCSCEEGGGC--------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEE
T ss_pred             CCCee---ee---ccC-ceEEEEecCCccHhhh--------cccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeC
Confidence            22222   11   112 27999999 6676432        222345678999999999999999999999999999987


Q ss_pred             cCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccc
Q 013973          235 SEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY  275 (433)
Q Consensus       235 ~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~  275 (433)
                      +|...-.+                 .....+.|+||+.+..
T Consensus       241 dgd~~d~~-----------------~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          241 EKDAEDPS-----------------SITLTPIIIXFPQMVS  264 (397)
T ss_dssp             EECSSCTT-----------------SEEEEEEECCCTTCEE
T ss_pred             CCCccccc-----------------ccccceEEEEeCCccc
Confidence            76322110                 1122478999987654

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.33  E-value=3.9e-12  Score=117.79  Aligned_cols=108  Identities=11%  Similarity=0.095  Sum_probs=81.3

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      +.|.+...+|.|+.+.||++...  ++.+++|+..... .....+..|..+++.+..+    ..+.+++.+....+..|+
T Consensus        14 ~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~----~~vP~v~~~~~~~~~~~l   87 (263)
T 3tm0_A           14 EKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGK----LPVPKVLHFERHDGWSNL   87 (263)
T ss_dssp             TTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTT----SCCCCEEEEEEETTEEEE
T ss_pred             ccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcC----CCCCeEEEEEecCCceEE
Confidence            45889999999999999999743  5779999986321 2234578899999999652    336667777778889999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD  217 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~  217 (433)
                      |||++ |.+|.+.+.       +......++.+++.+|..||+
T Consensus        88 v~e~i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~  123 (263)
T 3tm0_A           88 LMSEADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHS  123 (263)
T ss_dssp             EEECCSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCeehhhccC-------CcccHHHHHHHHHHHHHHHhC
Confidence            99999 778876521       122345778899999999998

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.17  E-value=4.5e-11  Score=110.07  Aligned_cols=105  Identities=12%  Similarity=0.101  Sum_probs=70.7

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  177 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~  177 (433)
                      .+.+....+.|..+.||++.. .+|..+++|+....  .......|..+++.+.++.   ..+.+++.+....+..++||
T Consensus        21 ~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~---~~vP~~~~~~~~~~~~~~v~   94 (264)
T 1nd4_A           21 GYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG--ALNELQDEAARLSWLATTG---VPCAAVLDVVTEAGRDWLLL   94 (264)
T ss_dssp             TCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTT---CCBCCEEEEEECSSCEEEEE
T ss_pred             CCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCC---CCCCeEEEeccCCCCCEEEE
Confidence            466655445666799999964 45667999987643  2245678999999997642   22556667777778899999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 013973          178 EKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL  218 (433)
Q Consensus       178 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~  218 (433)
                      |++ |.+|.  ..     ..+   ...++.+++..|..||+.
T Consensus        95 e~i~G~~l~--~~-----~~~---~~~~~~~l~~~l~~lh~~  126 (264)
T 1nd4_A           95 GEVPGQDLL--SS-----HLA---PAEKVSIMADAMRRLHTL  126 (264)
T ss_dssp             ECCSSEETT--TS-----CCC---HHHHHHHHHHHHHHHTTS
T ss_pred             EecCCcccC--cC-----cCC---HhHHHHHHHHHHHHHhCC
Confidence            999 66663  11     122   225667777777777764

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=99.12  E-value=9.5e-11  Score=110.98  Aligned_cols=102  Identities=16%  Similarity=0.108  Sum_probs=69.4

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcC-CCCCceEEecceeecC---CeEEEEEe
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD-KGGNRCVQIRNWFDYR---NHICIVFE  178 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~-~~~~~i~~~~~~~~~~---~~~~lV~e  178 (433)
                      +.++.|....||++.     ..+++|+... .........|..+++.+..+. ...|.+   +......   ...|+||+
T Consensus        26 ~~~~~G~~n~v~~v~-----~~~vlR~~~~-~~~~~~~~~E~~~l~~l~~~~~v~vP~~---~~~~~~~~~~~~~~~vm~   96 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN-----RDFIFKFPKH-SRGSTNLFNEVNILKRIHNKLPLPIPEV---VFTGMPSETYQMSFAGFT   96 (304)
T ss_dssp             CEEEECSSEEEEEST-----TSEEEEEESS-HHHHHHHHHHHHHHHHHTTSSSSCCCCE---EEECCCCSSCSCSCEEEE
T ss_pred             EecCCCCcceEEEEC-----CEEEEEecCC-cchHHHHHHHHHHHHHHHhcCCCCCCce---EeecCCCCCCCcceEEEc
Confidence            558999999999863     3488998653 334566788999999885532 223333   3332222   24588999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013973          179 KL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD  217 (433)
Q Consensus       179 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~  217 (433)
                      ++ |..|.+....    .++..+...++.|++..|..||+
T Consensus        97 ~i~G~~l~~~~~~----~l~~~~~~~~~~~l~~~la~LH~  132 (304)
T 3sg8_A           97 KIKGVPLTPLLLN----NLPKQSQNQAAKDLARFLSELHS  132 (304)
T ss_dssp             CCCCEECCHHHHH----TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCeECCccccc----cCCHHHHHHHHHHHHHHHHHHHc
Confidence            99 6676543322    47788888888888888888886

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.08  E-value=3.6e-10  Score=109.59  Aligned_cols=108  Identities=16%  Similarity=0.136  Sum_probs=74.5

Q ss_pred             EEeeeeccccEEEEEEEECCCCeEEEEEEee--cch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC---CeE
Q 013973          101 IHSKMGEGTFGQVLECWDRERKEMVAIKIVR--GIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR---NHI  173 (433)
Q Consensus       101 ~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~--~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~---~~~  173 (433)
                      -++.|+.|.++.||++...  +..+++|+..  ...  ........|..+++.+....   ..+++++..+.+.   +..
T Consensus        42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~---vpvP~~~~~~~~~~~~g~~  116 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTD---VPVAKMYALCEDESVIGRA  116 (359)
T ss_dssp             EEEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSS---SCCCCEEEEECCTTTTSSC
T ss_pred             eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCC---CCCCcEEEECCCCCccCCe
Confidence            4578899999999998754  3568888765  322  22346778999999997633   2355666666554   568


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD  217 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~  217 (433)
                      |+|||++ |..+.+..    ...++......++.+++..|..||+
T Consensus       117 ~~vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~  157 (359)
T 3dxp_A          117 FYIMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHT  157 (359)
T ss_dssp             EEEEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhC
Confidence            9999999 65553311    1247788888999999999999997

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.66  E-value=3.3e-07  Score=86.59  Aligned_cols=104  Identities=17%  Similarity=0.101  Sum_probs=64.2

Q ss_pred             EeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEeccee-ecCCeEEEEEecC
Q 013973          102 HSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF-DYRNHICIVFEKL  180 (433)
Q Consensus       102 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~-~~~~~~~lV~e~~  180 (433)
                      ++.++.|....||+.     +..+++|+-.. .........|..+|+.+.++..  -.+...+.+. ...+..++|||++
T Consensus        24 v~~l~~G~~n~v~~v-----g~~~VlR~~~~-~~~~~~~~~E~~~L~~L~~~~~--v~VP~~~~~~~~~~g~~~~v~e~i   95 (306)
T 3tdw_A           24 VESLGEGFRNYAILV-----NGDWVFRFPKS-QQGADELNKEIQLLPLLVGCVK--VNIPQYVYIGKRSDGNPFVGYRKV   95 (306)
T ss_dssp             EEEEEECSSEEEEEE-----TTTEEEEEESS-HHHHHHHHHHHHHHHHHTTTCS--SBCCCEEEEEECTTSCEEEEEECC
T ss_pred             eeecCCCcceeEEEE-----CCEEEEEecCC-chHHHHHHHHHHHHHHHHhcCC--CCCCCeEeecccCCCceEEEEecc
Confidence            356788998999988     34588998542 3345667889999999976421  1133333333 3456678999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 013973          181 -GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD  217 (433)
Q Consensus       181 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~  217 (433)
                       |..|.+....    .++......++.++...|..||+
T Consensus        96 ~G~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~  129 (306)
T 3tdw_A           96 QGQILGEDGMA----VLPDDAKDRLALQLAEFMNELSA  129 (306)
T ss_dssp             CSEECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeECchhhhh----hCCHHHHHHHHHHHHHHHHHHhc
Confidence             6666553211    24444455555555555555553

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.56  E-value=3e-07  Score=84.96  Aligned_cols=101  Identities=14%  Similarity=0.198  Sum_probs=66.2

Q ss_pred             eeeccccE-EEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecC-C
Q 013973          104 KMGEGTFG-QVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-G  181 (433)
Q Consensus       104 ~iG~G~~g-~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~-~  181 (433)
                      .+..|..| .||+......+..+++|+-...  ....+..|..+|+.+....   | +.+++.+..+.+..++|||++ |
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~v---P-VP~v~~~~~~~~~~~lvme~l~G  104 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFM---P-LPTIKHFIRTPDDAWLLTTAIPG  104 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTS---C-CCCEEEEEEETTEEEEEEECCCS
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCC---C-cCeEEEEEEECCeEEEEEEeeCC
Confidence            34445444 6999887777778999987633  3345678999999886532   2 566677778888999999999 6


Q ss_pred             CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 013973          182 SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH  216 (433)
Q Consensus       182 ~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH  216 (433)
                      .++.+.....      ......+..++...|.-||
T Consensus       105 ~~~~~~~~~~------~~~~~~~~~~l~~~L~~Lh  133 (272)
T 4gkh_A          105 KTAFQVLEEY------PDSGENIVDALAVFLRRLH  133 (272)
T ss_dssp             EEHHHHHHHC------GGGHHHHHHHHHHHHHHHH
T ss_pred             ccccccccCC------HHHHHHHHHHHHHHHHHhc
Confidence            6766654321      1122334455555555555

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=98.29  E-value=1.3e-05  Score=76.26  Aligned_cols=76  Identities=13%  Similarity=0.171  Sum_probs=45.0

Q ss_pred             EeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEec-c--eeecCCeEEEEEe
Q 013973          102 HSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR-N--WFDYRNHICIVFE  178 (433)
Q Consensus       102 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~-~--~~~~~~~~~lV~e  178 (433)
                      ++.|+.|..+.||++... + ..+++|+....   ......|..+++.+..+....|.++... +  +....+..++||+
T Consensus        37 ~~~l~gG~~n~~~~v~~~-~-~~~vlk~~~~~---~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~  111 (346)
T 2q83_A           37 IDVIQGNQMALVWKVHTD-S-GAVCLKRIHRP---EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD  111 (346)
T ss_dssp             EEECC----CEEEEEEET-T-EEEEEEEECSC---HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred             eeeccccccCcEEEEEeC-C-CCEEEEecCCC---HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence            356666778899998763 3 34999998752   2334467788888876543334433311 1  1234677899999


Q ss_pred             cC-CC
Q 013973          179 KL-GS  182 (433)
Q Consensus       179 ~~-~~  182 (433)
                      ++ |.
T Consensus       112 ~i~G~  116 (346)
T 2q83_A          112 WIEGR  116 (346)
T ss_dssp             CCCCB
T ss_pred             eecCc
Confidence            99 54

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.29  E-value=3.3e-06  Score=82.63  Aligned_cols=77  Identities=21%  Similarity=0.245  Sum_probs=48.1

Q ss_pred             EeeeeccccEEEEEEEECCCCeEEEEEEeecchh--------hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973          102 HSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK--------YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus       102 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--------~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      ++.||.|.++.||++.+..+++.|++|.......        .......|.++++.+....  ...+..++.+  +....
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~--~~~vP~~~~~--d~~~~  110 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHV--PHLVPRVFYS--DTEMA  110 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTC--GGGSCCEEEE--ETTTT
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhC--CCCcCeEEEE--cCCcc
Confidence            5789999999999997766677899997642111        1234567899998886532  1223344433  23445


Q ss_pred             EEEEecCCC
Q 013973          174 CIVFEKLGS  182 (433)
Q Consensus       174 ~lV~e~~~~  182 (433)
                      ++|||++.+
T Consensus       111 ~lvmE~l~g  119 (397)
T 2olc_A          111 VTVMEDLSH  119 (397)
T ss_dssp             EEEECCCTT
T ss_pred             EEEEEeCCC
Confidence            799999943

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.05  E-value=8.3e-06  Score=78.47  Aligned_cols=82  Identities=10%  Similarity=0.098  Sum_probs=53.3

Q ss_pred             EEEEeee-eccccEEEEEEEEC---C---CCeEEEEEEeecch---h-hHHHHHHHHHHHHHHHhc-CCCCCceEEecce
Q 013973           99 YKIHSKM-GEGTFGQVLECWDR---E---RKEMVAIKIVRGIK---K-YREAAMIEIEVLQQLAKH-DKGGNRCVQIRNW  166 (433)
Q Consensus        99 ~~~~~~i-G~G~~g~V~~~~~~---~---~~~~vAiK~~~~~~---~-~~~~~~~E~~~l~~l~~~-~~~~~~i~~~~~~  166 (433)
                      ...++.| +.|....+|+....   .   ++..+++|+.....   . .......|..+++.+..+ ...   +.+++.+
T Consensus        22 v~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vp---vP~v~~~   98 (357)
T 3ats_A           22 VTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVP---VPRVRWI   98 (357)
T ss_dssp             EEEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSC---CCCEEEE
T ss_pred             eEEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCC---CCcEEEE
Confidence            3445778 88989999988653   1   15678999865322   0 124567899999999875 333   4444444


Q ss_pred             eecC---CeEEEEEecC-CCC
Q 013973          167 FDYR---NHICIVFEKL-GSS  183 (433)
Q Consensus       167 ~~~~---~~~~lV~e~~-~~~  183 (433)
                      ..+.   +..++|||++ |..
T Consensus        99 ~~~~~~~g~~~~v~e~l~G~~  119 (357)
T 3ats_A           99 ETTGDVLGTPFFLMDYVEGVV  119 (357)
T ss_dssp             ECSSTTTSSCEEEEECCCCBC
T ss_pred             ccCCCccCCceEEEEecCCCC
Confidence            4443   4568999999 544

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.72  E-value=0.00016  Score=67.72  Aligned_cols=69  Identities=12%  Similarity=-0.016  Sum_probs=44.0

Q ss_pred             EeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecC-
Q 013973          102 HSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-  180 (433)
Q Consensus       102 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~-  180 (433)
                      ++.|+.|....+|++      ..+++|+........-....|..+++.+...... |.++   ....  ..-++|+||+ 
T Consensus        23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~-P~~~---~~~~--~~~~~v~e~i~   90 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA------GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVS-PEVL---HVDP--ATGVMVTRYIA   90 (301)
T ss_dssp             CEEEESCSSEEEEEE------TTEEEEEECC----CCCHHHHHHHHHHHHHTTSS-CCEE---EECT--TTCCEEEECCT
T ss_pred             eeEcCCcccccccee------eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCC-CceE---EEEC--CCCEEEEeecC
Confidence            578889999999998      3388998753221111235688889888776543 4443   3332  2336889999 


Q ss_pred             CC
Q 013973          181 GS  182 (433)
Q Consensus       181 ~~  182 (433)
                      +|
T Consensus        91 ~g   92 (301)
T 3dxq_A           91 GA   92 (301)
T ss_dssp             TC
T ss_pred             CC
Confidence            55

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.64  E-value=0.00044  Score=65.10  Aligned_cols=77  Identities=22%  Similarity=0.227  Sum_probs=57.1

Q ss_pred             EEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecC
Q 013973          101 IHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  180 (433)
Q Consensus       101 ~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~  180 (433)
                      -++.|+.|....+|+...  ++..+++|+....  ....+..|...|+.+....  ...+++.+.+....+..++|||++
T Consensus        40 ~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~--~v~VP~vl~~~~~~g~~~lvme~l  113 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLIND--EVQTVFVKINERS--YRSMFRAEADQLALLAKTN--SINVPLVYGIGNSQGHSFLLLEAL  113 (312)
T ss_dssp             EEEEECCSSSSEEEEEES--SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTT--SSBCCCEEEEEECSSEEEEEEECC
T ss_pred             eeEEeCCccceeeeEEEE--CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhC--CCCcceEEEEeecCCceEEEEEec
Confidence            457789999999999875  4567889987632  3456788999999997642  133566666666678899999999


Q ss_pred             -CCC
Q 013973          181 -GSS  183 (433)
Q Consensus       181 -~~~  183 (433)
                       |..
T Consensus       114 ~G~~  117 (312)
T 3jr1_A          114 NKSK  117 (312)
T ss_dssp             CCCC
T ss_pred             cCCC
Confidence             543

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.63  E-value=0.00012  Score=72.07  Aligned_cols=75  Identities=16%  Similarity=0.169  Sum_probs=43.6

Q ss_pred             EeeeeccccEEEEEEEECCCCeEEEEEEeec-----chh---hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973          102 HSKMGEGTFGQVLECWDRERKEMVAIKIVRG-----IKK---YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus       102 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~---~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      ++.||.|..+.||++..  +++.++||....     ...   .......|.+++..+....  ...+.+++.+.  .+..
T Consensus        39 i~~l~~G~~n~vyrv~~--~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~--~~~vP~v~~~~--~~~~  112 (420)
T 2pyw_A           39 IKEVGDGNLNFVFIVVG--SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLS--PDHVPEVYHFD--RTMA  112 (420)
T ss_dssp             EEECCCSSSCEEEEEEC--SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHS--GGGSCCEEEEE--TTTT
T ss_pred             EEEccCCCcEEEEEEEc--CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhC--CCCCCeEEEEC--CCcc
Confidence            57789999999999954  456799994321     011   0122334555554443321  12344444443  4567


Q ss_pred             EEEEecC-CC
Q 013973          174 CIVFEKL-GS  182 (433)
Q Consensus       174 ~lV~e~~-~~  182 (433)
                      ++|||++ +|
T Consensus       113 ~lv~e~l~~g  122 (420)
T 2pyw_A          113 LIGMRYLEPP  122 (420)
T ss_dssp             EEEECCCCTT
T ss_pred             EEEEeecCCc
Confidence            8999999 76

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=97.58  E-value=0.00056  Score=64.47  Aligned_cols=78  Identities=8%  Similarity=0.010  Sum_probs=47.1

Q ss_pred             EEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEec-c--eeecCCeEEEE
Q 013973          100 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR-N--WFDYRNHICIV  176 (433)
Q Consensus       100 ~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~-~--~~~~~~~~~lV  176 (433)
                      .-++.|+.|....+|++.... + .+++|+.... ........|..+++.+..+....|.++... +  +....+..++|
T Consensus        25 ~~~~~i~~G~~n~~~~v~~~~-g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l  101 (322)
T 2ppq_A           25 TSYKGIAEGVENSNFLLHTTK-D-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAAL  101 (322)
T ss_dssp             EEEEEECC---EEEEEEEESS-C-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEE
T ss_pred             eEeeccCCCcccceEEEEeCC-c-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEE
Confidence            445778889889999987643 3 5889988642 122345678999999887644334433221 1  11234677899


Q ss_pred             EecC
Q 013973          177 FEKL  180 (433)
Q Consensus       177 ~e~~  180 (433)
                      |+++
T Consensus       102 ~~~l  105 (322)
T 2ppq_A          102 ISFL  105 (322)
T ss_dssp             EECC
T ss_pred             EEeC
Confidence            9999

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=97.55  E-value=0.00055  Score=64.71  Aligned_cols=78  Identities=14%  Similarity=0.167  Sum_probs=48.4

Q ss_pred             eeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecc--eeecCCeEEEEEecC
Q 013973          103 SKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN--WFDYRNHICIVFEKL  180 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~--~~~~~~~~~lV~e~~  180 (433)
                      ..|+ |....||++... +|+.+++|+.............|..+++.+.......|.++...+  .....+..++||+++
T Consensus        32 ~~l~-g~~n~~y~v~~~-~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i  109 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQDE-DRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV  109 (328)
T ss_dssp             EEEC-CSSSEEEEECCT-TCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred             Eeec-CcccceEEEEcC-CCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence            3455 778899987543 455699999863322345567789999998775433333322211  122356778999999


Q ss_pred             CC
Q 013973          181 GS  182 (433)
Q Consensus       181 ~~  182 (433)
                      .|
T Consensus       110 ~G  111 (328)
T 1zyl_A          110 GG  111 (328)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=97.36  E-value=0.00095  Score=63.28  Aligned_cols=78  Identities=9%  Similarity=0.023  Sum_probs=39.3

Q ss_pred             eeeeccccEE-EEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecC-
Q 013973          103 SKMGEGTFGQ-VLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-  180 (433)
Q Consensus       103 ~~iG~G~~g~-V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~-  180 (433)
                      +.|+.|+... +|+... .++..+++|......  ......|..+++.+.......|.   ++......+  ++|||++ 
T Consensus        24 ~~l~gg~s~~~~~r~~~-~~~~~~vlk~~~~~~--~~~~~~e~~~l~~L~~~g~~vP~---v~~~d~~~g--~ll~e~l~   95 (333)
T 3csv_A           24 TPLAGDASSRRYQRLRS-PTGAKAVLMDWSPEE--GGDTQPFVDLAQYLRNLDISAPE---IYAEEHARG--LLLIEDLG   95 (333)
T ss_dssp             CC--------CCEEEEC-TTCCEEEEEECCTTT--TCCSHHHHHHHHHHHHTTCBCCC---EEEEETTTT--EEEECCCC
T ss_pred             eECCCCCCCceEEEEEc-CCCCeEEEEECCCCC--CccccHHHHHHHHHHhCCCCCCc---eeeecCCCC--EEEEeeCC
Confidence            4555554444 666643 225567777654221  13345688888888775433343   443333334  6899999 


Q ss_pred             CCCHHHHH
Q 013973          181 GSSLYDFL  188 (433)
Q Consensus       181 ~~~L~~~l  188 (433)
                      +..+.+++
T Consensus        96 ~~~l~~~l  103 (333)
T 3csv_A           96 DALFTEVI  103 (333)
T ss_dssp             SCBHHHHH
T ss_pred             CcchHHHh
Confidence            44555443

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.10  E-value=0.0043  Score=57.43  Aligned_cols=75  Identities=11%  Similarity=-0.013  Sum_probs=51.0

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-hhHHHHHHHHHHHHHHHhcC-CCCCceEEecceeecCCeEEE
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHD-KGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~-~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      ...-++.+|.|..+.||+.... +|+.|.+|+..... .....+..|...|+.+.... ...|   +++...    .-++
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l~-DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP---~v~~~~----~~~l   87 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVP---QVAGWD----DRTL   87 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSC---CEEEEE----TTEE
T ss_pred             CeEEEEecCCCCCeEEEEEEEC-CCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcc---eEEecc----CceE
Confidence            4667889999999999999864 56789999865322 22234678999999986542 2233   333322    2368


Q ss_pred             EEecC
Q 013973          176 VFEKL  180 (433)
Q Consensus       176 V~e~~  180 (433)
                      |||++
T Consensus        88 v~e~l   92 (288)
T 3f7w_A           88 AMEWV   92 (288)
T ss_dssp             EEECC
T ss_pred             EEEee
Confidence            99998

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=97.01  E-value=0.002  Score=63.49  Aligned_cols=71  Identities=14%  Similarity=0.156  Sum_probs=47.4

Q ss_pred             EEeeeeccccEEEEEEEECC-------CCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973          101 IHSKMGEGTFGQVLECWDRE-------RKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus       101 ~~~~iG~G~~g~V~~~~~~~-------~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      -++.|+.|....||++....       ++..|++|+.... ........|..+++.+..+.. .|   ++++.+..    
T Consensus        77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~-~P---~l~~~~~~----  147 (429)
T 1nw1_A           77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHL-GP---KLYGIFSG----  147 (429)
T ss_dssp             EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTS-SS---CEEEEETT----
T ss_pred             EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCC-CC---cEEEEeCC----
Confidence            35678888899999998653       2567999988431 111345579999999877553 23   34444432    


Q ss_pred             EEEEecC
Q 013973          174 CIVFEKL  180 (433)
Q Consensus       174 ~lV~e~~  180 (433)
                      .+||||+
T Consensus       148 g~v~e~l  154 (429)
T 1nw1_A          148 GRLEEYI  154 (429)
T ss_dssp             EEEECCC
T ss_pred             CEEEEEe
Confidence            2899998

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=96.96  E-value=0.002  Score=62.37  Aligned_cols=70  Identities=14%  Similarity=0.175  Sum_probs=41.8

Q ss_pred             eeeeccccEEEEEEEECC-------CCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973          103 SKMGEGTFGQVLECWDRE-------RKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~~-------~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      +.|..|-...+|++....       +++.|++|+............+|..+++.+..... .|   ++++.+..    .+
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv-~P---~ll~~~~~----g~  127 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSL-GP---QLYGVFPE----GR  127 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTS-SC---CEEEEETT----EE
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCC-CC---eEEEEcCC----cc
Confidence            567677788899987642       34679999864322223445689999999987654 23   34444443    28


Q ss_pred             EEecC
Q 013973          176 VFEKL  180 (433)
Q Consensus       176 V~e~~  180 (433)
                      ||||+
T Consensus       128 v~e~i  132 (379)
T 3feg_A          128 LEQYI  132 (379)
T ss_dssp             EEECC
T ss_pred             EEEEe
Confidence            99998

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=96.91  E-value=0.0035  Score=60.28  Aligned_cols=71  Identities=20%  Similarity=0.132  Sum_probs=41.8

Q ss_pred             EeeeeccccEEEEEEEECC--------CCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973          102 HSKMGEGTFGQVLECWDRE--------RKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus       102 ~~~iG~G~~g~V~~~~~~~--------~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      ++.|+.|....+|++....        .+..+++|+.............|..+++.+..+.. .|.+   +..+.  +  
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~-~P~~---~~~~~--~--  109 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKI-APQL---LNTFN--G--  109 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTS-SCCE---EEEET--T--
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCC-CCce---EEecC--C--
Confidence            4677888888999997653        12578999875322211123578899998877543 3333   33331  2  


Q ss_pred             EEEEecC
Q 013973          174 CIVFEKL  180 (433)
Q Consensus       174 ~lV~e~~  180 (433)
                      ++||||+
T Consensus       110 ~~v~e~i  116 (369)
T 3c5i_A          110 GRIEEWL  116 (369)
T ss_dssp             EEEEECC
T ss_pred             cEEEEEe
Confidence            5899999

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=96.81  E-value=0.013  Score=55.71  Aligned_cols=72  Identities=13%  Similarity=0.098  Sum_probs=44.0

Q ss_pred             eccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCC-CCceEEec-c--eeecCCeEEEEEecC-
Q 013973          106 GEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKG-GNRCVQIR-N--WFDYRNHICIVFEKL-  180 (433)
Q Consensus       106 G~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~-~~~i~~~~-~--~~~~~~~~~lV~e~~-  180 (433)
                      |.|....||++... +| .+++|+.....     ...|..+++.+...... .|.++... +  +....+..++||+|+ 
T Consensus        32 G~g~~N~vy~v~~~-~g-~~vLK~~~~~~-----~~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~  104 (339)
T 3i1a_A           32 GADTNAFAYQADSE-SK-SYFIKLKYGYH-----DEINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH  104 (339)
T ss_dssp             TSCSSCEEEEEECS-SC-EEEEEEEECSS-----CCHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred             cCccccceEEEEeC-CC-CEEEEEecCcc-----chHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence            33446789998753 34 79999876433     14578888888765432 23322221 1  123457889999999 


Q ss_pred             CCCH
Q 013973          181 GSSL  184 (433)
Q Consensus       181 ~~~L  184 (433)
                      |..+
T Consensus       105 G~~~  108 (339)
T 3i1a_A          105 APNG  108 (339)
T ss_dssp             CCBT
T ss_pred             CCcC
Confidence            5433

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=96.75  E-value=0.014  Score=57.85  Aligned_cols=72  Identities=11%  Similarity=0.043  Sum_probs=44.9

Q ss_pred             EEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecC
Q 013973          101 IHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL  180 (433)
Q Consensus       101 ~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~  180 (433)
                      -++.|+.|-...+|++....++..|++|+........-....|..+++.+.....    ..++++.+. +   .+||||+
T Consensus       112 ~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl----~P~ll~~~~-~---G~v~e~I  183 (458)
T 2qg7_A          112 EFQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNI----AKKIYVFFT-N---GRIEEFM  183 (458)
T ss_dssp             EEEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSS----BCCEEEEET-T---EEEEECC
T ss_pred             EEEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCC----CCCEEEEeC-C---eEEEEee
Confidence            3567888889999999876545789999874321111112478999998876442    244555553 2   2599998

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=96.68  E-value=0.013  Score=51.46  Aligned_cols=97  Identities=12%  Similarity=0.008  Sum_probs=58.9

Q ss_pred             CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-HCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccCCC
Q 013973          183 SLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH-DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPK  261 (433)
Q Consensus       183 ~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH-~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~  261 (433)
                      +|.+.|+..+ .++++++++.++.|.+.+|.-+- +..-..+=+-|..|++..+|.                        
T Consensus        34 SL~eIL~~~~-~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~------------------------   88 (229)
T 2yle_A           34 SLEEILRLYN-QPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGA------------------------   88 (229)
T ss_dssp             EHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSC------------------------
T ss_pred             cHHHHHHHcC-CCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCc------------------------
Confidence            6999998765 68999999999999999987762 111112333467888865553                        


Q ss_pred             CCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh
Q 013973          262 SSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT  318 (433)
Q Consensus       262 ~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt  318 (433)
                         |.+.+ +.+.         .....+.|||... ...+.+.=|||||+++|..+-
T Consensus        89 ---V~f~~-~~s~---------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALD  131 (229)
T 2yle_A           89 ---VTLAP-AADD---------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALD  131 (229)
T ss_dssp             ---EEECC-C---------------------CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred             ---eeccc-cccc---------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence               33221 0000         1123466787653 234567789999999999875

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=95.26  E-value=0.038  Score=54.10  Aligned_cols=71  Identities=11%  Similarity=0.030  Sum_probs=44.8

Q ss_pred             EeeeeccccEEEEEEEECCC-------CeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973          102 HSKMGEGTFGQVLECWDRER-------KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus       102 ~~~iG~G~~g~V~~~~~~~~-------~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      ++.|..|-...+|++.....       ++.|++|+........-....|..+++.+..... .|.+   ++.+.  +  +
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi-~P~l---~~~~~--~--~  146 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINI-APNI---IADFP--E--G  146 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTS-SCCE---EEEET--T--E
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCC-CCCE---EEEcC--C--C
Confidence            46677788888999886531       4679999864322111123568999998877553 2333   33332  2  6


Q ss_pred             EEEecC
Q 013973          175 IVFEKL  180 (433)
Q Consensus       175 lV~e~~  180 (433)
                      +||||+
T Consensus       147 ~I~efI  152 (424)
T 3mes_A          147 RIEEFI  152 (424)
T ss_dssp             EEEECC
T ss_pred             EEEEEe
Confidence            889999

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=93.07  E-value=0.36  Score=46.66  Aligned_cols=35  Identities=26%  Similarity=0.493  Sum_probs=25.8

Q ss_pred             ceeccCCCCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccc
Q 013973          220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY  275 (433)
Q Consensus       220 ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~  275 (433)
                      ++|+|+.+.|||+..+..                     .++...+.++||..|..
T Consensus       246 fcHnDl~~gNil~~~~~~---------------------~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRE---------------------NSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EECSCCCGGGEEEETTGG---------------------GCSSCCEEECCCTTCEE
T ss_pred             eEEecCCCCeEEEecCcc---------------------cCcCCeEEEechHhccC
Confidence            679999999999954220                     03456789999988764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	433
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-55
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-52
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	9e-52
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-51
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-51
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-51
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	1e-50
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	4e-50
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	4e-49
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	8e-49
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-48
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-48
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	5e-48
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-47
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-47
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	6e-47
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	7e-47
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-45
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	4e-45
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	4e-45
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	4e-45
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	7e-45
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	8e-45
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-44
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	7e-44
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	9e-42
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	1e-41
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-41
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	9e-41
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	3e-40
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	5e-40
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	5e-40
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	7e-38
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-36
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	5e-36
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	1e-35
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	4e-35
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-34
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	6e-34
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-33
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	4e-33
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-32
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	5e-31
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	4e-30
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	6e-30
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	9e-30
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	9e-30
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-29
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-29
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	3e-29
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-28
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-28
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	6e-28
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-27
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-26
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-26
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	3e-26
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	3e-26
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-25
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-25
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-25
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	3e-24
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	1e-13
d1nw1a_	395	d.144.1.8 (A:) Choline kinase {Caenorhabditis eleg	8e-05

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  184 bits (467), Expect = 2e-55
 Identities = 68/338 (20%), Positives = 117/338 (34%), Gaps = 44/338 (13%)

Query: 96  TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKH 153
              ++  S++G G  G V +   +    ++A K++        R   + E++VL +    
Sbjct: 5   DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-NS 63

Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
                  V     F     I I  E + G SL   L+K      P  ++ +++  +++ +
Sbjct: 64  P----YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGL 117

Query: 213 AFMHDLC-MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
            ++ +   ++H D+KP N+L+ S                              IK+ DFG
Sbjct: 118 TYLREKHKIMHRDVKPSNILVNSRGE---------------------------IKLCDFG 150

Query: 272 -STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
            S        N  V TR Y +PE + G  ++   DIWS+G  LVE+  G       +  E
Sbjct: 151 VSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210

Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
              M    +         R           G    P  A        V + P    L   
Sbjct: 211 LELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPP--PKLPSG 268

Query: 391 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                  D    +   L  +P +R   ++ + H F  R
Sbjct: 269 VFSLEFQD---FVNKCLIKNPAERADLKQLMVHAFIKR 303

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  177 bits (451), Expect = 1e-52
 Identities = 71/341 (20%), Positives = 130/341 (38%), Gaps = 80/341 (23%)

Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAK 152
           ++   Y I  ++G G FG V  C ++    +   K +       +     EI ++ QL  
Sbjct: 26  SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL-H 84

Query: 153 HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
           H     + + + + F+ +  + ++ E L G  L+D +   +Y+      V    RQ  E 
Sbjct: 85  HP----KLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVINYMRQACEG 139

Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           +  MH+  ++H D+KPEN++                             K+S++K+IDFG
Sbjct: 140 LKHMHEHSIVHLDIKPENIMC-------------------------ETKKASSVKIIDFG 174

Query: 272 STTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 329
             T   PD+      +T  + APE++      +  D+W++G +   L +G + F   ++L
Sbjct: 175 LATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL 234

Query: 330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM 389
           E L  ++R      +     V   A+                                  
Sbjct: 235 ETLQNVKRCDWEFDEDAFSSVSPEAK---------------------------------- 260

Query: 390 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
                        ++ LL+ +P  RLT  +AL HP+   DH
Sbjct: 261 -----------DFIKNLLQKEPRKRLTVHDALEHPWLKGDH 290

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  174 bits (442), Expect = 9e-52
 Identities = 77/342 (22%), Positives = 147/342 (42%), Gaps = 45/342 (13%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKH 153
           S+Y+  +K+G+GTFG+V +   R+  + VA+K V      + +   A+ EI++LQ L   
Sbjct: 10  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 69

Query: 154 DKGGNRCV---QIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
           +      +   +   +   +  I +VF+     L   L  N    F +  ++ + + LL 
Sbjct: 70  NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG-LLSNVLVKFTLSEIKRVMQMLLN 128

Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++H   ++H D+K  NVL+     +K+ D+  +                   +    
Sbjct: 129 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA-------------------RAFSL 169

Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENL 329
              +      N  V T  YR PE++LG   +  P D+W  GCI+ E+ T   + Q +   
Sbjct: 170 AKNSQPNRYTNR-VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ 228

Query: 330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM 389
             LA++ ++ G +   +   VD +  +   +  L   +    ++ +K+ ++ P   +LI 
Sbjct: 229 HQLALISQLCGSITPEVWPNVDNY--ELYEKLELVKGQKRKVKDRLKAYVRDPYALDLID 286

Query: 390 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 431
           +               LL  DP  R+ + +AL H FF  D +
Sbjct: 287 K---------------LLVLDPAQRIDSDDALNHDFFWSDPM 313

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  174 bits (443), Expect = 1e-51
 Identities = 74/344 (21%), Positives = 139/344 (40%), Gaps = 81/344 (23%)

Query: 95  LTSRYKIHSKM-GEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKH 153
           +   YK+ S++ G G  G+VL+ +++  +E  A+K+++   K R     E+E+  + ++ 
Sbjct: 9   IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQC 64

Query: 154 DKGGNRCVQIRNWFDY----RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL 208
                  V+I + ++     R  + IV E L G  L+  ++    ++F      EI + +
Sbjct: 65  P----HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 120

Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
            E I ++H + + H D+KPEN+L  S                           ++ +K+ 
Sbjct: 121 GEAIQYLHSINIAHRDVKPENLLYTS------------------------KRPNAILKLT 156

Query: 269 DFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
           DFG         +      T +Y APEV+    +   CD+WS+G I+  L  G   F ++
Sbjct: 157 DFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 216

Query: 327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 386
             L     M+                     +R G+ ++P    S  S            
Sbjct: 217 HGLAISPGMKT-------------------RIRMGQYEFPNPEWSEVS------------ 245

Query: 387 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
                      ++  L++ LL+ +PT R+T  E + HP+  +  
Sbjct: 246 ----------EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 279

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  175 bits (443), Expect = 2e-51
 Identities = 84/340 (24%), Positives = 142/340 (41%), Gaps = 45/340 (13%)

Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLA 151
           ++  RY   S +GEG +G V   +D   K  VAIK +   +   Y +  + EI++L +  
Sbjct: 5   DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 64

Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
             +  G   +      +    + +V   +G+ LY  L+    +    D +     Q+L  
Sbjct: 65  HENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT---QHLSNDHICYFLYQILRG 121

Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           + ++H   ++H DLKP N+LL ++  +K+ D+  +     D  +   +            
Sbjct: 122 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL------------ 169

Query: 272 STTYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                       V+TR YRAPE++L   G+T   DIWSVGCIL E+ +   +F     L+
Sbjct: 170 ---------TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 220

Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
            L  +  +LG   Q  L  +        R   L  P             K     N +  
Sbjct: 221 QLNHILGILGSPSQEDLNCIIN---LKARNYLLSLPH------------KNKVPWNRLFP 265

Query: 391 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           + D  A D   LL  +L ++P  R+   +AL HP+  + +
Sbjct: 266 NADSKALD---LLDKMLTFNPHKRIEVEQALAHPYLEQYY 302

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  174 bits (442), Expect = 3e-51
 Identities = 75/343 (21%), Positives = 130/343 (37%), Gaps = 80/343 (23%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLA 151
           +++   Y IH ++G G FG V    +R      A K V    +  +E    EI+ +  L 
Sbjct: 22  DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL- 80

Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
           +H       V + + F+  N + +++E + G  L++ +   + +    D   E  RQ+ +
Sbjct: 81  RHP----TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCK 135

Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            +  MH+   +H DLKPEN++  +                          +S+ +K+IDF
Sbjct: 136 GLCHMHENNYVHLDLKPENIMFTT-------------------------KRSNELKLIDF 170

Query: 271 GSTTYERPDQNYIVST--RHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 328
           G T +  P Q+  V+T    + APEV  G    Y  D+WSVG +   L +G + F    +
Sbjct: 171 GLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND 230

Query: 329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 388
            E L  ++     +       +                                      
Sbjct: 231 DETLRNVKSCDWNMDDSAFSGISE------------------------------------ 254

Query: 389 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 431
                    D    ++ LL  DP  R+T  +AL HP+ T  + 
Sbjct: 255 ---------DGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA 288

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  172 bits (437), Expect = 1e-50
 Identities = 105/355 (29%), Positives = 164/355 (46%), Gaps = 46/355 (12%)

Query: 91  LGENLT-SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQ 149
            GE    +RY +  K+G G F  V    D      VA+KIVRG K Y EAA  EI++LQ+
Sbjct: 6   KGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQR 65

Query: 150 LAKHDK------GGNRCVQIRNWFDYRN----HICIVFEKLGSSLYDFLRKNNYRSFPID 199
           +   D       G N  +++ + F+++     H+ +VFE LG +L   ++K  +R  P+ 
Sbjct: 66  VNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLI 125

Query: 200 LVREIARQLLECIAFMHDLCMI-HTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKR 258
            V++I++QLL  + +MH  C I HTD+KPENVL+   +                      
Sbjct: 126 YVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDS--------------------- 164

Query: 259 MPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT 318
                 IK+ D G+  +        + TR YR+PEV+LG  W    DIWS  C++ EL T
Sbjct: 165 PENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELIT 224

Query: 319 GEALFQTHE------NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASR 372
           G+ LF+  E      + +H+A +  +LG LP ++L+        +  RG L         
Sbjct: 225 GDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLR-------N 277

Query: 373 ESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
            S      L  +     +     A +++  L  +L+ DP  R  A   + HP+  
Sbjct: 278 ISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLK 332

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  170 bits (430), Expect = 4e-50
 Identities = 83/338 (24%), Positives = 140/338 (41%), Gaps = 54/338 (15%)

Query: 96  TSRYKIHSKMGEGTFGQVLECWDRE-RKEMVAIKIVR---GIKKYREAAMIEIEVLQQLA 151
             +Y+  +++GEG +G+V +  D +     VA+K VR   G +    + + E+ VL+ L 
Sbjct: 6   DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLE 65

Query: 152 KHDKGGN---RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQL 208
             +         V   +  D    + +VFE +   L  +L K      P + ++++  QL
Sbjct: 66  TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 125

Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
           L  + F+H   ++H DLKP+N+L+ SS  IK+ D                          
Sbjct: 126 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLAD-------------------------F 160

Query: 269 DFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN 328
                   +     +V T  YRAPEV+L   +  P D+WSVGCI  E+   + LF+   +
Sbjct: 161 GLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD 220

Query: 329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 388
           ++ L  +  V+G   +                   DWP   A             ++  +
Sbjct: 221 VDQLGKILDVIGLPGEE------------------DWPRDVALPRQAFHSKSAQPIEKFV 262

Query: 389 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
              +D    D   LL   L ++P  R++A  AL HP+F
Sbjct: 263 -TDIDELGKD---LLLKCLTFNPAKRISAYSALSHPYF 296

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  166 bits (421), Expect = 4e-49
 Identities = 62/334 (18%), Positives = 121/334 (36%), Gaps = 79/334 (23%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKG 156
             ++I   +G+G FG V    +++ K ++A+K++   +  +     ++    ++  H + 
Sbjct: 6   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65

Query: 157 GNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
            N  +++  +F     + ++ E     ++Y  L+K     F          +L   +++ 
Sbjct: 66  PN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYC 122

Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
           H   +IH D+KPEN+LL S+  +K+ D+  S+H P                         
Sbjct: 123 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT-------------------- 162

Query: 276 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 335
                  +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    +
Sbjct: 163 ------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 216

Query: 336 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 395
            RV    P  + +                                               
Sbjct: 217 SRVEFTFPDFVTE----------------------------------------------- 229

Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                 L+  LL+++P+ R   RE L HP+ T +
Sbjct: 230 --GARDLISRLLKHNPSQRPMLREVLEHPWITAN 261

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  167 bits (423), Expect = 8e-49
 Identities = 60/343 (17%), Positives = 117/343 (34%), Gaps = 79/343 (23%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAK 152
           + L  +Y I   +G G FG V  C +   K+    K V+     +     EI +L    +
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIA-R 59

Query: 153 HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
           H       + +   F+    + ++FE + G  +++ +  + +       +     Q+ E 
Sbjct: 60  HR----NILHLHESFESMEELVMIFEFISGLDIFERINTSAFE-LNEREIVSYVHQVCEA 114

Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           + F+H   + H D++PEN++  +     +                         K+I+FG
Sbjct: 115 LQFLHSHNIGHFDIRPENIIYQTRRSSTI-------------------------KIIEFG 149

Query: 272 STTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 329
                +P  N+  + +   Y APEV      +   D+WS+G ++  L +G   F    N 
Sbjct: 150 QARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ 209

Query: 330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM 389
           + +  +        +   K +                                       
Sbjct: 210 QIIENIMNAEYTFDEEAFKEISI------------------------------------- 232

Query: 390 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHLR 432
                   +    +  LL  +   R+TA EAL+HP+  +   R
Sbjct: 233 --------EAMDFVDRLLVKERKSRMTASEALQHPWLKQKIER 267

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  165 bits (418), Expect = 1e-48
 Identities = 69/342 (20%), Positives = 118/342 (34%), Gaps = 81/342 (23%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR----------GIKKYREAAMIEIEVL 147
            Y+    +G G    V  C  +   +  A+KI+            +++ REA + E+++L
Sbjct: 4   NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63

Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIAR 206
           ++++ H       +Q+++ ++      +VF+ +    L+D+L +    +      R+I R
Sbjct: 64  RKVSGHP----NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMR 117

Query: 207 QLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIK 266
            LLE I  +H L ++H DLKPEN+LL     IK+ D+  S                    
Sbjct: 118 ALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS-------------------C 158

Query: 267 VIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
            +D G    E       ++             G+    D+WS G I+  L  G   F   
Sbjct: 159 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR 218

Query: 327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 386
           + +  L M+                                                   
Sbjct: 219 KQMLMLRMIMSGNYQFGSPEWDDYSD---------------------------------- 244

Query: 387 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR 428
                       +  L+   L   P  R TA EAL HPFF +
Sbjct: 245 -----------TVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 275

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  165 bits (419), Expect = 1e-48
 Identities = 89/333 (26%), Positives = 146/333 (43%), Gaps = 53/333 (15%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHD 154
            ++   K+GEGT+G V +  ++   E+VA+K +R     +     A+ EI +L++L   +
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62

Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                 V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF
Sbjct: 63  -----IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117

Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   ++H DLKP+N+L+ +   IK+ D+  +         +                  
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY------------------ 159

Query: 275 YERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 333
                  + V T  YRAPE++LG   ++   DIWS+GCI  E+ T  ALF     ++ L 
Sbjct: 160 ------THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213

Query: 334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 393
            + R LG   + +                  WP   +  +   S  K  R      + V 
Sbjct: 214 RIFRTLGTPDEVV------------------WPGVTSMPDYKPSFPKWARQD--FSKVVP 253

Query: 394 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
               D   LL  +L YDP  R++A+ AL HPFF
Sbjct: 254 PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  164 bits (416), Expect = 5e-48
 Identities = 67/343 (19%), Positives = 124/343 (36%), Gaps = 81/343 (23%)

Query: 92  GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQ 149
            E++   Y     +G G F +V+   D+  +++VAIK +    ++    +   EI VL +
Sbjct: 4   AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHK 63

Query: 150 LAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQL 208
           + KH       V + + ++   H+ ++ + + G  L+D + +  +  +       +  Q+
Sbjct: 64  I-KHP----NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQV 116

Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
           L+ + ++HDL ++H DLKPEN+L  S                        + + S I + 
Sbjct: 117 LDAVKYLHDLGIVHRDLKPENLLYYS------------------------LDEDSKIMIS 152

Query: 269 DFGSTTYERPDQNY--IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH 326
           DFG +  E P         T  Y APEV+    ++   D WS+G I   L  G   F   
Sbjct: 153 DFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 212

Query: 327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 386
            + +    + +            +                                    
Sbjct: 213 NDAKLFEQILKAEYEFDSPYWDDISD---------------------------------- 238

Query: 387 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                           ++ L+  DP  R T  +AL+HP+   D
Sbjct: 239 -----------SAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD 270

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  162 bits (412), Expect = 1e-47
 Identities = 67/342 (19%), Positives = 124/342 (36%), Gaps = 81/342 (23%)

Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAK 152
           N    ++I  ++G+G FG+V +  ++E   + A K++    ++  E  M+EI++L     
Sbjct: 9   NPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASC-D 67

Query: 153 HDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
           H       V++ + F Y N++ I+ E       D +     R      ++ + +Q L+ +
Sbjct: 68  HPN----IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDAL 123

Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
            ++HD  +IH DLK  N+L      IK+ D+  S    +                     
Sbjct: 124 NYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRR---------------- 167

Query: 273 TTYERPDQNYIVSTRHYRAPEVILGL-----GWTYPCDIWSVGCILVELCTGEALFQTHE 327
                   +  + T ++ APEV++        + Y  D+WS+G  L+E+   E       
Sbjct: 168 --------DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELN 219

Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
            +  L  + +   P                     L  P   +S                
Sbjct: 220 PMRVLLKIAKSEPP--------------------TLAQPSRWSS---------------- 243

Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                     +    L+  L  +   R T  + L+HPF T D
Sbjct: 244 ----------NFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 275

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  164 bits (416), Expect = 1e-47
 Identities = 81/344 (23%), Positives = 146/344 (42%), Gaps = 65/344 (18%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG 157
            Y     +G G+FG V +    +  E+VAIK V   K+++     E++++++L  H    
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL-DHC--- 73

Query: 158 NRCVQIRNWF------DYRNHICIVFEKLGSSLYDFLRK--NNYRSFPIDLVREIARQLL 209
              V++R +F          ++ +V + +  ++Y   R      ++ P+  V+    QL 
Sbjct: 74  -NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132

Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
             +A++H   + H D+KP+N+LL                           P ++ +K+ D
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLL--------------------------DPDTAVLKLCD 166

Query: 270 FGSTTYERPDQNY--IVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTH 326
           FGS       +     + +R+YRAPE+I G   +T   D+WS GC+L EL  G+ +F   
Sbjct: 167 FGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226

Query: 327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 386
             ++ L  + +VLG   +  ++ ++ +  ++       +P+           +K      
Sbjct: 227 SGVDQLVEIIKVLGTPTREQIREMNPNYTEF------KFPQ-----------IKAHPWTK 269

Query: 387 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +        A     L   LL Y PT RLT  EA  H FF    
Sbjct: 270 VFRPRTPPEAIA---LCSRLLEYTPTARLTPLEACAHSFFDELR 310

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  161 bits (408), Expect = 6e-47
 Identities = 73/335 (21%), Positives = 138/335 (41%), Gaps = 58/335 (17%)

Query: 104 KMGEGTFGQVLECWDRERKEMVAIKIVRGIKK------YREAAMIEIEVLQQLAKHDKGG 157
            +GEG F  V +  D+   ++VAIK ++   +          A+ EI++LQ+L  H    
Sbjct: 5   FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHP--- 60

Query: 158 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
              + + + F ++++I +VF+ + + L   ++ N+    P   ++      L+ + ++H 
Sbjct: 61  -NIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTP-SHIKAYMLMTLQGLEYLHQ 118

Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYER 277
             ++H DLKP N+LL  +  +K+ D+  +      +  +                     
Sbjct: 119 HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY--------------------- 157

Query: 278 PDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
               + V TR YRAPE++ G   +    D+W+VGCIL EL           +L+ L  + 
Sbjct: 158 ---THQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIF 214

Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 396
             LG   +                    WP+  +  + +          + I        
Sbjct: 215 ETLGTPTEE------------------QWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDL 256

Query: 397 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDHL 431
            DL   +QGL  ++P  R+TA +AL+  +F+    
Sbjct: 257 LDL---IQGLFLFNPCARITATQALKMKYFSNRPG 288

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  162 bits (410), Expect = 7e-47
 Identities = 71/337 (21%), Positives = 138/337 (40%), Gaps = 56/337 (16%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG 157
            Y++  K+G G + +V E  +    E V +KI++     ++    EI++L+ L       
Sbjct: 36  DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILK--PVKKKKIKREIKILENLRGGP--- 90

Query: 158 NRCVQIRNWF--DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
              + + +           +VFE +  +      +           +R    ++L+ + +
Sbjct: 91  -NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDY 144

Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H + ++H D+KP NV++                            +   +++ID+G   
Sbjct: 145 CHSMGIMHRDVKPHNVMIDH--------------------------EHRKLRLIDWGLAE 178

Query: 275 YERPDQ--NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGE-ALFQTHENLE 330
           +  P Q  N  V++R+++ PE+++    + Y  D+WS+GC+L  +   +   F  H+N +
Sbjct: 179 FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD 238

Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
            L  + +VLG                Y+ +  ++            S  +  R  +   Q
Sbjct: 239 QLVRIAKVLGT----------EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQ 288

Query: 391 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFT 427
           H+     +    L  LLRYD   RLTAREA+ HP+F 
Sbjct: 289 HLVSP--EALDFLDKLLRYDHQSRLTAREAMEHPYFY 323

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  158 bits (401), Expect = 2e-45
 Identities = 75/341 (21%), Positives = 132/341 (38%), Gaps = 40/341 (11%)

Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQL 150
            +  RY+    +G G  G V   +D      VAIK +      + + + A  E+ +++ +
Sbjct: 14  TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 73

Query: 151 AKHDKGGNR-CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 209
              +          +   +    + +V E + ++L   ++         + +  +  Q+L
Sbjct: 74  NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQML 129

Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
             I  +H   +IH DLKP N+++ S   +K+ D                           
Sbjct: 130 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILD-------------------------FG 164

Query: 270 FGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL 329
              T          V TR+YRAPEVILG+G+    DIWSVGCI+ E+   + LF   + +
Sbjct: 165 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI 224

Query: 330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIM 389
           +    +   LG      +K++      YV       P+ A           L    +   
Sbjct: 225 DQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN----RPKYAGLTFPKLFPDSLFPADSEHN 280

Query: 390 QHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
           +     A D   LL  +L  DP  R++  +AL+HP+    +
Sbjct: 281 KLKASQARD---LLSKMLVIDPAKRISVDDALQHPYINVWY 318

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  158 bits (399), Expect = 4e-45
 Identities = 84/356 (23%), Positives = 148/356 (41%), Gaps = 56/356 (15%)

Query: 83  KDGHYMFALGEN---LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKY 136
           + G Y   + +    + + Y+    +G G +G V    D      VAIK +      + +
Sbjct: 1   RSGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELF 60

Query: 137 REAAMIEIEVLQQLA-KHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRS 195
            + A  E+ +L+ +  ++  G           D      +V   +G+ L   ++      
Sbjct: 61  AKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH---EK 117

Query: 196 FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY 255
              D ++ +  Q+L+ + ++H   +IH DLKP N+ +                       
Sbjct: 118 LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV----------------------- 154

Query: 256 FKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILV 314
                +   +K++DFG       +    V TR YRAPEVIL  + +T   DIWSVGCI+ 
Sbjct: 155 ----NEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMA 210

Query: 315 ELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRES 374
           E+ TG+ LF+  ++L+ L  + +V G  P   ++R+     K   +G  +  +   +   
Sbjct: 211 EMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFAS-- 268

Query: 375 IKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
                        I+ +    A +   LL+ +L  D   R+TA EAL HP+F   H
Sbjct: 269 -------------ILTNASPLAVN---LLEKMLVLDAEQRVTAGEALAHPYFESLH 308

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  157 bits (397), Expect = 4e-45
 Identities = 68/345 (19%), Positives = 118/345 (34%), Gaps = 88/345 (25%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREAAMIEIEVLQ 148
           ++    +    ++G G+FG V    D    E+VAIK +        +  +  + E+  LQ
Sbjct: 11  DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70

Query: 149 QLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQL 208
           +L +H       +Q R  +   +   +V E    S  D L  +  +      +  +    
Sbjct: 71  KL-RHP----NTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGA 124

Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
           L+ +A++H   MIH D+K  N+LL                                +K+ 
Sbjct: 125 LQGLAYLHSHNMIHRDVKAGNILLSEPGL---------------------------VKLG 157

Query: 269 DFGSTTYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQT 325
           DFGS +   P  ++ V T ++ APEVIL +    +    D+WS+G   +EL   +     
Sbjct: 158 DFGSASIMAPANSF-VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 216

Query: 326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 385
              +  L  + +   P  Q                    W E                  
Sbjct: 217 MNAMSALYHIAQNESPALQSG-----------------HWSE------------------ 241

Query: 386 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
                          + +   L+  P DR T+   L+H F  R+ 
Sbjct: 242 ------------YFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  156 bits (395), Expect = 4e-45
 Identities = 67/340 (19%), Positives = 118/340 (34%), Gaps = 80/340 (23%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLA 151
            +   +Y    K+G+G  G V    D    + VAI+ +   +   +E  + EI V+++  
Sbjct: 16  GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN- 74

Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
           K+       V   + +   + + +V E L G SL D + +          +  + R+ L+
Sbjct: 75  KNP----NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQ 127

Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + F+H   +IH D+K +N+LL     +K+ D+        + S    M           
Sbjct: 128 ALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM----------- 176

Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                        V T ++ APEV+    +    DIWS+G + +E+  GE  +     L 
Sbjct: 177 -------------VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR 223

Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
            L ++     P                     L  PE  ++                   
Sbjct: 224 ALYLIATNGTP--------------------ELQNPEKLSA------------------- 244

Query: 391 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
                       L   L  D   R +A+E L+H F     
Sbjct: 245 -------IFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAK 277

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  155 bits (392), Expect = 7e-45
 Identities = 59/336 (17%), Positives = 113/336 (33%), Gaps = 79/336 (23%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDK 155
            + +   +GEG +G+V    +R  +E VA+KIV         E    EI + + L  H+ 
Sbjct: 6   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHE- 63

Query: 156 GGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                V+        N   +  E   G  L+D +  +     P    +    QL+  + +
Sbjct: 64  ---NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVY 118

Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H + + H D+KPEN+LL   + +K+ D+  +     ++                     
Sbjct: 119 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN--------------------- 157

Query: 275 YERPDQNYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTHENLEHLA 333
                 N +  T  Y APE++    +   P D+WS G +L  +  GE  +    +     
Sbjct: 158 -RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE- 215

Query: 334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 393
             +        +  K++D                                          
Sbjct: 216 YSDWKEKKTYLNPWKKIDSAPL-------------------------------------- 237

Query: 394 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD 429
                   LL  +L  +P+ R+T  +  +  ++ + 
Sbjct: 238 -------ALLHKILVENPSARITIPDIKKDRWYNKP 266

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  155 bits (393), Expect = 8e-45
 Identities = 69/344 (20%), Positives = 123/344 (35%), Gaps = 85/344 (24%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-------KYREAAMIEIE 145
           EN+   Y    ++G G F  V +C ++      A K ++  +         RE    E+ 
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65

Query: 146 VLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREI 204
           +L+++ +H       + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 66  ILKEI-QHP----NVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 118

Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
            +Q+L  + ++H L + H DLKPEN++L+                        R      
Sbjct: 119 LKQILNGVYYLHSLQIAHFDLKPENIMLLD-----------------------RNVPKPR 155

Query: 265 IKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL 322
           IK+IDFG             I  T  + APE++         D+WS+G I   L +G + 
Sbjct: 156 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215

Query: 323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP 382
           F      E LA +  V               A+                           
Sbjct: 216 FLGDTKQETLANVSAVNYEFEDEYFSNTSALAK--------------------------- 248

Query: 383 RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
                               ++ LL  DP  R+T +++L+HP+ 
Sbjct: 249 ------------------DFIRRLLVKDPKKRMTIQDSLQHPWI 274

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  156 bits (395), Expect = 2e-44
 Identities = 77/342 (22%), Positives = 146/342 (42%), Gaps = 53/342 (15%)

Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQL 150
            +  RY+  S +G G +G V   +D +    VA+K +        + +    E+ +L+ +
Sbjct: 15  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74

Query: 151 A-KHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLL 209
             ++  G           +  N + +V   +G+ L + ++    +    D V+ +  Q+L
Sbjct: 75  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQIL 131

Query: 210 ECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVID 269
             + ++H   +IH DLKP N+                            + +   +K++D
Sbjct: 132 RGLKYIHSADIIHRDLKPSNLA---------------------------VNEDCELKILD 164

Query: 270 FGSTTYERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHEN 328
           FG   +   +    V+TR YRAPE++L    +    DIWSVGCI+ EL TG  LF   ++
Sbjct: 165 FGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224

Query: 329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI 388
           ++ L ++ R++G     +LK++   + +   +     P+   +                +
Sbjct: 225 IDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFAN---------------V 269

Query: 389 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
               +  A D   LL+ +L  D   R+TA +AL H +F + H
Sbjct: 270 FIGANPLAVD---LLEKMLVLDSDKRITAAQALAHAYFAQYH 308

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  152 bits (385), Expect = 7e-44
 Identities = 63/349 (18%), Positives = 129/349 (36%), Gaps = 92/349 (26%)

Query: 90  ALGENLTSRY-KIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIE 145
           A+G +   R+ K   ++G G+F  V +  D E    VA   ++     K  R+    E E
Sbjct: 1   AVGMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAE 60

Query: 146 VLQQLAKHDKGGNRCVQIRNWF----DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDL 200
           +L+ L +H       V+  + +      +  I +V E +   +L  +L++   +   I +
Sbjct: 61  MLKGL-QHP----NIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRF--KVMKIKV 113

Query: 201 VREIARQLLECIAFMHDLC--MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKR 258
           +R   RQ+L+ + F+H     +IH DLK +N+ +                          
Sbjct: 114 LRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG------------------------ 149

Query: 259 MPKSSAIKVIDFGSTTYERPDQNY-IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 317
              + ++K+ D G  T +R      ++ T  + APE+     +    D+++ G  ++E+ 
Sbjct: 150 --PTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMA 206

Query: 318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS 377
           T E  +   +N   +                   R     V+    D             
Sbjct: 207 TSEYPYSECQNAAQIY------------------RRVTSGVKPASFD------------- 235

Query: 378 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
                            +  ++  +++G +R +  +R + ++ L H FF
Sbjct: 236 ---------------KVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF 269

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  146 bits (370), Expect = 9e-42
 Identities = 64/341 (18%), Positives = 116/341 (34%), Gaps = 93/341 (27%)

Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR-------GIKKYREAAMIEIEVL 147
           L S+Y++   +G G FG V           VAIK V        G         +E+ +L
Sbjct: 2   LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61

Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQ 207
           ++++    G    +++ +WF+  +   ++ E+       F       +   +L R    Q
Sbjct: 62  KKVSSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 118

Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           +LE +   H+  ++H D+K EN+L+  +                             +K+
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLNRGE--------------------------LKL 152

Query: 268 IDFG-STTYERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQT 325
           IDFG     +         TR Y  PE I           +WS+G +L ++  G+  F+ 
Sbjct: 153 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 212

Query: 326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 385
            E                              + RG++ + +  +S              
Sbjct: 213 DEE-----------------------------IIRGQVFFRQRVSS-------------- 229

Query: 386 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
                       +  HL++  L   P+DR T  E   HP+ 
Sbjct: 230 ------------ECQHLIRWCLALRPSDRPTFEEIQNHPWM 258

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  147 bits (371), Expect = 1e-41
 Identities = 80/333 (24%), Positives = 132/333 (39%), Gaps = 55/333 (16%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHD 154
           +Y    K+GEGT+G V +  +    E  A+K +R  K         + EI +L++L   +
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61

Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                 V++ +    +  + +VFE L   L   L             +    QLL  IA+
Sbjct: 62  -----IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAY 115

Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            HD  ++H DLKP+N+L+     +K+ D+  +         +                  
Sbjct: 116 CHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY------------------ 157

Query: 275 YERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 333
                  + + T  YRAP+V++G   ++   DIWSVGCI  E+  G  LF      + L 
Sbjct: 158 ------THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLM 211

Query: 334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 393
            + R+LG         V                     +      +  P      ++ +D
Sbjct: 212 RIFRILGTPNSKNWPNVTELP-----------------KYDPNFTVYEPLPWESFLKGLD 254

Query: 394 HSAGDLTHLLQGLLRYDPTDRLTAREALRHPFF 426
            S  DL   L  +L+ DP  R+TA++AL H +F
Sbjct: 255 ESGIDL---LSKMLKLDPNQRITAKQALEHAYF 284

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  146 bits (369), Expect = 2e-41
 Identities = 61/336 (18%), Positives = 110/336 (32%), Gaps = 81/336 (24%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG 157
            +K    +GEG+F  V+   +       AIKI+      +E  +  +   + +       
Sbjct: 9   DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68

Query: 158 NRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 216
              V++   F     +           L  ++RK    SF     R    +++  + ++H
Sbjct: 69  F-FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLH 125

Query: 217 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 276
              +IH DLKPEN+LL    +I++ D+ ++     +S   +                   
Sbjct: 126 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA------------------ 167

Query: 277 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
               N  V T  Y +PE++         D+W++GCI+ +L  G   F+          + 
Sbjct: 168 ----NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 223

Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 396
           ++    P+                    +P+                             
Sbjct: 224 KLEYDFPEKF------------------FPK----------------------------- 236

Query: 397 GDLTHLLQGLLRYDPTDRLTAREA------LRHPFF 426
                L++ LL  D T RL   E         HPFF
Sbjct: 237 --ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 270

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  145 bits (365), Expect = 9e-41
 Identities = 81/338 (23%), Positives = 143/338 (42%), Gaps = 55/338 (16%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHD 154
           +Y+   K+GEGT+G V +  +RE  E+VA+K VR     +    +A+ EI +L++L   +
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62

Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                 V++ +       + +VFE     L  +    N    P ++V+    QLL+ + F
Sbjct: 63  -----IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDP-EIVKSFLFQLLKGLGF 116

Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
            H   ++H DLKP+N+L+  +  +K+ ++  +         +                  
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY------------------ 158

Query: 275 YERPDQNYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEA-LFQTHENLEHL 332
                 +  V T  YR P+V+ G    +   D+WS GCI  EL      LF  ++  + L
Sbjct: 159 ------SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL 212

Query: 333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 392
             + R+LG   +     + +  +                    K     P   +L+    
Sbjct: 213 KRIFRLLGTPTEEQWPSMTKLPD-------------------YKPYPMYPATTSLVNVVP 253

Query: 393 DHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRDH 430
             +A     LLQ LL+ +P  R++A EAL+HP+F+   
Sbjct: 254 KLNA-TGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC 290

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  144 bits (363), Expect = 3e-40
 Identities = 63/335 (18%), Positives = 113/335 (33%), Gaps = 85/335 (25%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREAAMIEIEVLQQLAKH 153
            + +H  +G+G+FG+V     ++  +  AIK ++     +    E  M+E  VL    +H
Sbjct: 3   DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 62

Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
                    +   F  + ++  V E L G  L   ++      F +      A +++  +
Sbjct: 63  P----FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGL 116

Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGS 272
            F+H   +++ DLK +N+LL    +IK+ D+          +                  
Sbjct: 117 QFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT---------------- 160

Query: 273 TTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL 332
                   N    T  Y APE++LG  + +  D WS G +L E+  G++ F   +  E  
Sbjct: 161 --------NTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF 212

Query: 333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHV 392
                                    +R     +P                          
Sbjct: 213 -----------------------HSIRMDNPFYPRWLEK--------------------- 228

Query: 393 DHSAGDLTHLLQGLLRYDPTDRLTAR-EALRHPFF 426
                +   LL  L   +P  RL  R +  +HP F
Sbjct: 229 -----EAKDLLVKLFVREPEKRLGVRGDIRQHPLF 258

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  143 bits (360), Expect = 5e-40
 Identities = 60/339 (17%), Positives = 110/339 (32%), Gaps = 64/339 (18%)

Query: 95  LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHD 154
           + +RY++  K+G G+FG +    D    E VAIK+   +K       IE ++ + +    
Sbjct: 5   VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLEC-VKTKHPQLHIESKIYKMMQGG- 62

Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                   IR      ++  +V E LG SL D     + R F +  V  +A Q++  I +
Sbjct: 63  ---VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEY 118

Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H    IH D+KP+N L+   +   +           D    K+   +   + I +    
Sbjct: 119 IHSKNFIHRDVKPDNFLMGLGKKGNLVYII-------DFGLAKKYRDARTHQHIPYRENK 171

Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                   +  T  Y +    LG+  +   D+ S+G +L+    G   +Q  +       
Sbjct: 172 N-------LTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK 224

Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
            ER                                         +   ++   I      
Sbjct: 225 YER-----------------------------------------ISEKKMSTPIEVLCKG 243

Query: 395 SAGDLTHLLQGLLRYDPTDRLTA---REALRHPFFTRDH 430
              +    L         D+      R+  R+ F  +  
Sbjct: 244 YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 282

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (358), Expect = 5e-40
 Identities = 62/343 (18%), Positives = 111/343 (32%), Gaps = 96/343 (27%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDK 155
           Y++   +G G++G+  +   +   +++  K +      +  ++  + E+ +L++L KH  
Sbjct: 6   YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHPN 64

Query: 156 GGNRCVQIRNWFDYR--NHICIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLE 210
                V+  +    R    + IV E   G  L   + K     +    + V  +  QL  
Sbjct: 65  ----IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 120

Query: 211 CIAFMHDL-----CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAI 265
            +   H        ++H DLKP NV L   +                            +
Sbjct: 121 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQN---------------------------V 153

Query: 266 KVIDFGSTTYERPDQNY---IVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEAL 322
           K+ DFG       D ++    V T +Y +PE +  + +    DIWS+GC+L ELC     
Sbjct: 154 KLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPP 213

Query: 323 FQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLP 382
           F      E                           +R G+        S E         
Sbjct: 214 FTAFSQKELAGK-----------------------IREGKFRRIPYRYSDE--------- 241

Query: 383 RLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPF 425
                           L  ++  +L      R +  E L +P 
Sbjct: 242 ----------------LNEIITRMLNLKDYHRPSVEEILENPL 268

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  137 bits (345), Expect = 7e-38
 Identities = 50/252 (19%), Positives = 92/252 (36%), Gaps = 38/252 (15%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG 157
            YK+  ++GEG+FG + E  +    + VAIK     +        E    + LA      
Sbjct: 6   HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEP-RRSDAPQLRDEYRTYKLLAGC---- 60

Query: 158 NRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD 217
                +  +     H  +V + LG SL D L     R F +  V   A+Q+L  +  +H+
Sbjct: 61  TGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHE 119

Query: 218 LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG------ 271
             +++ D+KP+N L+                             ++ I V+DFG      
Sbjct: 120 KSLVYRDIKPDNFLIGR----------------------PNSKNANMIYVVDFGMVKFYR 157

Query: 272 ----STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHE 327
                      ++  +  T  Y +    LG   +   D+ ++G + +    G   +Q  +
Sbjct: 158 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 217

Query: 328 NLEHLAMMERVL 339
              +    ER+ 
Sbjct: 218 AATNKQKYERIG 229

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  134 bits (338), Expect = 3e-36
 Identities = 67/341 (19%), Positives = 128/341 (37%), Gaps = 89/341 (26%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREAAMIEIEVLQQLAKH 153
            + +H  +G G FG+V  C   +  +M A+K +      +K+    A+ E  +L  ++  
Sbjct: 5   DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 64

Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECI 212
           D      V +   F   + +  + + + G  L+  L ++    F    +R  A +++  +
Sbjct: 65  DC--PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIILGL 120

Query: 213 AFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG- 271
             MH+  +++ DLKP N+LL    +                           +++ D G 
Sbjct: 121 EHMHNRFVVYRDLKPANILLDEHGH---------------------------VRISDLGL 153

Query: 272 STTYERPDQNYIVSTRHYRAPEVIL-GLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
           +  + +   +  V T  Y APEV+  G+ +    D +S+GC+L +L  G + F+ H+  +
Sbjct: 154 ACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 213

Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
              +    L                       ++ P+  +                    
Sbjct: 214 KHEIDRMTLTM--------------------AVELPDSFSP------------------- 234

Query: 391 HVDHSAGDLTHLLQGLLRYDPTDRLT-----AREALRHPFF 426
                  +L  LL+GLL+ D   RL      A+E    PFF
Sbjct: 235 -------ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 268

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  132 bits (334), Expect = 5e-36
 Identities = 62/337 (18%), Positives = 110/337 (32%), Gaps = 91/337 (27%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREAAMIEIEVLQQLAKHD 154
           ++I   +G G+FG+V     R      A+K+++       K  E    E  +L  +  H 
Sbjct: 6   FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THP 64

Query: 155 KGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
                 +++   F     I ++ + +       L + + R FP  + +  A ++   + +
Sbjct: 65  ----FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQR-FPNPVAKFYAAEVCLALEY 119

Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +H   +I+ DLKPEN+LL  + +                           IK+ DFG   
Sbjct: 120 LHSKDIIYRDLKPENILLDKNGH---------------------------IKITDFGFAK 152

Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
           Y       +  T  Y APEV+    +    D WS G ++ E+  G   F           
Sbjct: 153 YVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFY---------- 202

Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
                        ++        +    L +P                            
Sbjct: 203 -----DSNTMKTYEK--------ILNAELRFPPFFNE----------------------- 226

Query: 395 SAGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 426
              D+  LL  L+  D + RL        +   HP+F
Sbjct: 227 ---DVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWF 260

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (328), Expect = 1e-35
 Identities = 58/329 (17%), Positives = 108/329 (32%), Gaps = 84/329 (25%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKG 156
              K+   +G+G FG V+    R  K  VA+K ++      +A + E  V+ QL +H   
Sbjct: 7   KELKLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKN-DATAQAFLAEASVMTQL-RHS-- 60

Query: 157 GNRCVQIRNWF-DYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAF 214
               VQ+     + +  + IV E +   SL D+LR         D + + +  + E + +
Sbjct: 61  --NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 118

Query: 215 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTT 274
           +     +H DL   NVL+                            + +  KV DFG T 
Sbjct: 119 LEGNNFVHRDLAARNVLV---------------------------SEDNVAKVSDFGLTK 151

Query: 275 YERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAM 334
                Q+       + APE +    ++   D+WS G +L E+ +   +      L+ +  
Sbjct: 152 EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV-- 209

Query: 335 MERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH 394
                                +  +  ++D P+G             P +  ++      
Sbjct: 210 -------------------VPRVEKGYKMDAPDGCP-----------PAVYEVMKN---- 235

Query: 395 SAGDLTHLLQGLLRYDPTDRLTAREALRH 423
                          D   R +  +    
Sbjct: 236 -----------CWHLDAAMRPSFLQLREQ 253

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (328), Expect = 4e-35
 Identities = 62/338 (18%), Positives = 113/338 (33%), Gaps = 90/338 (26%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREAAMIEIEVLQQLAKHD 154
           +     +G+GTFG+V+   ++      A+KI+R      K      + E  VLQ   +H 
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RH- 64

Query: 155 KGGNRCVQIRNWFDYRNHICIVFEK-LGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                   ++  F   + +C V E   G  L+  L +     F  +  R    +++  + 
Sbjct: 65  ---PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALE 119

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H   +++ D+K EN++L    +IK+ D+        D +                   
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM----------------- 162

Query: 274 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 333
                       T  Y APEV+    +    D W +G ++ E+  G   F   ++     
Sbjct: 163 -------KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE 215

Query: 334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 393
           +                       +    + +P   +                       
Sbjct: 216 L-----------------------ILMEEIRFPRTLSP---------------------- 230

Query: 394 HSAGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 426
               +   LL GLL+ DP  RL      A+E + H FF
Sbjct: 231 ----EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  128 bits (322), Expect = 1e-34
 Identities = 51/276 (18%), Positives = 96/276 (34%), Gaps = 37/276 (13%)

Query: 94  NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR----GIKKYREAAMIEIEVLQQ 149
           +L+ RY++   +G G   +V    D      VA+K++R        +      E +    
Sbjct: 4   HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 63

Query: 150 LAKHDKGGNRCVQIRNWFDYRNH----ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREI 204
           L  H       V + +  +          IV E + G +L D +              E+
Sbjct: 64  L-NHP----AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEV 116

Query: 205 ARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSA 264
                + + F H   +IH D+KP N+++ ++  +KV D+  +       +   +      
Sbjct: 117 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQT----- 171

Query: 265 IKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ 324
                             ++ T  Y +PE   G       D++S+GC+L E+ TGE  F 
Sbjct: 172 ----------------AAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT 215

Query: 325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRR 360
               +       R     P    + +    +  V +
Sbjct: 216 GDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLK 251

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  125 bits (316), Expect = 6e-34
 Identities = 62/336 (18%), Positives = 118/336 (35%), Gaps = 86/336 (25%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR---GIKKYREAAMIEIEVLQQLAKH 153
            +  +  ++G G+FG V +    +    VA+K++       +  +A   E+ VL++    
Sbjct: 8   GQITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT--- 61

Query: 154 DKGGNRCVQIRNWFDY--RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
                R V I  +  Y     + IV +   GSSLY  L     + F +  + +IARQ  +
Sbjct: 62  -----RHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQ 115

Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++H   +IH DLK  N+ L     +K+ D+  +    + S   +             
Sbjct: 116 GMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF------------ 163

Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLG---WTYPCDIWSVGCILVELCTGEALFQTHE 327
                       +  +  + APEVI       +++  D+++ G +L EL TG+  +    
Sbjct: 164 ----------EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 213

Query: 328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNL 387
           N + +  M                      V RG L                        
Sbjct: 214 NRDQIIFM----------------------VGRGYLSPD--------------------- 230

Query: 388 IMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 423
           + +   +    +  L+   L+    +R    + L  
Sbjct: 231 LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  126 bits (317), Expect = 2e-33
 Identities = 66/338 (19%), Positives = 111/338 (32%), Gaps = 91/338 (26%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKH 153
           ++     +G G+FG+V+    +E     A+KI+   K    K  E  + E  +LQ +   
Sbjct: 42  QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NF 100

Query: 154 DKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIA 213
                      ++ D  N   ++    G  ++  LR+     F     R  A Q++    
Sbjct: 101 P---FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFE 155

Query: 214 FMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGST 273
           ++H L +I+ DLKPEN+L+    Y                           I+V DFG  
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGY---------------------------IQVTDFGFA 188

Query: 274 TYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLA 333
              +     +  T    APE+IL  G+    D W++G ++ E+  G   F   + ++   
Sbjct: 189 KRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE 248

Query: 334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVD 393
            +       P H                                                
Sbjct: 249 KIVSGKVRFPSHFSS--------------------------------------------- 263

Query: 394 HSAGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 426
               DL  LL+ LL+ D T R         +   H +F
Sbjct: 264 ----DLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  123 bits (310), Expect = 4e-33
 Identities = 62/334 (18%), Positives = 115/334 (34%), Gaps = 80/334 (23%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKG 156
              K+  ++G G FG+V   +     + VA+K ++      +A + E  +++QL +H   
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQL-QHQ-- 68

Query: 157 GNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
             R V++      +  I I+ E +   SL DFL+  +     I+ + ++A Q+ E +AF+
Sbjct: 69  --RLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125

Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
            +   IH DL+  N+L+  +   K+ D+  +     +    +                  
Sbjct: 126 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG---------------- 169

Query: 276 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMM 335
                        + APE I    +T   D+WS G +L E+ T   +         +   
Sbjct: 170 -------AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV--- 219

Query: 336 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHS 395
                              +   R  R+  P+                            
Sbjct: 220 ------------------IQNLERGYRMVRPDNCPE------------------------ 237

Query: 396 AGDLTHLLQGLLRYDPTDRLTAREALR--HPFFT 427
             +L  L++   +  P DR T          FFT
Sbjct: 238 --ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (306), Expect = 2e-32
 Identities = 60/333 (18%), Positives = 111/333 (33%), Gaps = 78/333 (23%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKG 156
              ++  K+G+G FG+V           VAIK ++      EA + E +V+++L      
Sbjct: 17  ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHE--- 72

Query: 157 GNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 216
             + VQ+           +       SL DFL+    +   +  + ++A Q+   +A++ 
Sbjct: 73  --KLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 130

Query: 217 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 276
            +  +H DL+  N+L+  +   KV D+  +     +    ++                  
Sbjct: 131 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG----------------- 173

Query: 277 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
                       + APE  L   +T   D+WS G +L EL T   +              
Sbjct: 174 ------AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-------- 219

Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 396
                  + +L +V+R         R+  P                 L +L+ Q      
Sbjct: 220 ------NREVLDQVERGY-------RMPCPPECP-----------ESLHDLMCQ------ 249

Query: 397 GDLTHLLQGLLRYDPTDRLTAREALR--HPFFT 427
                      R +P +R T          +FT
Sbjct: 250 ---------CWRKEPEERPTFEYLQAFLEDYFT 273

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (295), Expect = 5e-31
 Identities = 58/327 (17%), Positives = 105/327 (32%), Gaps = 76/327 (23%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKG 156
           S      ++G G FG V   +    K+ VAIK +R      E  + E EV+ +L  H   
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKL-SHP-- 60

Query: 157 GNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 216
             + VQ+      +  IC+VFE +         +     F  + +  +   + E +A++ 
Sbjct: 61  --KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 118

Query: 217 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYE 276
           + C+IH DL   N L+  ++ IKV D+  +     D                        
Sbjct: 119 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG----------------- 161

Query: 277 RPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMME 336
                       + +PEV     ++   D+WS G ++ E+ +   +   + +   +    
Sbjct: 162 ------TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV---- 211

Query: 337 RVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA 396
                             E      RL  P  A++                         
Sbjct: 212 -----------------VEDISTGFRLYKPRLAST------------------------- 229

Query: 397 GDLTHLLQGLLRYDPTDRLTAREALRH 423
             +  ++    +  P DR      LR 
Sbjct: 230 -HVYQIMNHCWKERPEDRPAFSRLLRQ 255

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  115 bits (290), Expect = 4e-30
 Identities = 51/297 (17%), Positives = 111/297 (37%), Gaps = 31/297 (10%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKG 156
           +   +  K+G G +G+V E   ++    VA+K ++      E  + E  V++++ KH   
Sbjct: 17  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHP-- 73

Query: 157 GNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFM 215
               VQ+           I+ E +   +L D+LR+ N +     ++  +A Q+   + ++
Sbjct: 74  --NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 131

Query: 216 HDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTY 275
                IH DL   N L+  +  +KV D+  S     D+                      
Sbjct: 132 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-------------------- 171

Query: 276 ERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHL--A 333
                        + APE +    ++   D+W+ G +L E+ T         +L  +   
Sbjct: 172 ---AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 228

Query: 334 MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
           + +      P+   ++V        +    D P  A   ++ +++ +   + + + +
Sbjct: 229 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEK 285

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (291), Expect = 6e-30
 Identities = 57/358 (15%), Positives = 110/358 (30%), Gaps = 105/358 (29%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKE-----MVAIKIVR--GIKKYREAAMIEIEVLQQ 149
              +    +G G FG+V+        +      VA+K+++       REA M E++++ Q
Sbjct: 37  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 96

Query: 150 LAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYR-------------- 194
           L  H+      V +         I ++FE      L ++LR    +              
Sbjct: 97  LGSHE----NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRL 152

Query: 195 -------SFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL 247
                      + +   A Q+ + + F+     +H DL   NVL+   + +K+ D+  + 
Sbjct: 153 EEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLAR 212

Query: 248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIW 307
               DS+Y  R                              + APE +    +T   D+W
Sbjct: 213 DIMSDSNYVVRG----------------------NARLPVKWMAPESLFEGIYTIKSDVW 250

Query: 308 SVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG-RLDW 365
           S G +L E+ + G   +       +                        K ++ G ++D 
Sbjct: 251 SYGILLWEIFSLGVNPYPGIPVDANF----------------------YKLIQNGFKMDQ 288

Query: 366 PEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 423
           P  A                            ++  ++Q    +D   R +       
Sbjct: 289 PFYATE--------------------------EIYIIMQSCWAFDSRKRPSFPNLTSF 320

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (287), Expect = 9e-30
 Identities = 60/332 (18%), Positives = 119/332 (35%), Gaps = 85/332 (25%)

Query: 104 KMGEGTFGQVLECWDRERK--EMVAIKIVR---GIKKYREAAMIEIEVLQQLAKHDKGGN 158
           ++G G FG V + + + +K  + VA+KI++        ++  + E  V+QQL  +     
Sbjct: 14  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNP---- 68

Query: 159 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 218
             V++    +  + + ++       L  +L++N  R      + E+  Q+   + ++ + 
Sbjct: 69  YIVRMIGICEAESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEES 126

Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
             +H DL   NVLLV+  Y K+ D+  S     D +Y+K                     
Sbjct: 127 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ------------------- 167

Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLAMMER 337
              +      + APE I    ++   D+WS G ++ E    G+  ++  +  E  AM+E+
Sbjct: 168 --THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 225

Query: 338 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 397
                                   R+  P G                             
Sbjct: 226 GE----------------------RMGCPAGCPR-------------------------- 237

Query: 398 DLTHLLQGLLRYDPTDRLTARE---ALRHPFF 426
           ++  L+     YD  +R         LR+ ++
Sbjct: 238 EMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 269

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (288), Expect = 9e-30
 Identities = 57/346 (16%), Positives = 104/346 (30%), Gaps = 95/346 (27%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRE--RKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAK 152
           +  K    +GEG FGQVL+   ++   +   AIK ++    K        E+EVL +L  
Sbjct: 10  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69

Query: 153 HDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNY--------------RSFP 197
           H       + +    ++R ++ +  E     +L DFLRK+                 +  
Sbjct: 70  HP----NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 125

Query: 198 IDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFK 257
              +   A  +   + ++     IH DL   N+L+  +   K+ D+  S           
Sbjct: 126 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVK--- 182

Query: 258 RMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELC 317
                                 +        + A E +    +T   D+WS G +L E+ 
Sbjct: 183 ----------------------KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 220

Query: 318 TGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKS 377
           +             L                      EK  +  RL+ P           
Sbjct: 221 SLGGTPYCGMTCAEL---------------------YEKLPQGYRLEKPLNCDD------ 253

Query: 378 VMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 423
                               ++  L++   R  P +R +  + L  
Sbjct: 254 --------------------EVYDLMRQCWREKPYERPSFAQILVS 279

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (286), Expect = 2e-29
 Identities = 58/337 (17%), Positives = 111/337 (32%), Gaps = 62/337 (18%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGG 157
              +   +G+G FG+V     + R E VA+KI    ++       EI     L +H+   
Sbjct: 4   TIVLQESIGKGRFGEVWRG--KWRGEEVAVKIFSSREERSWFREAEIYQTVML-RHENIL 60

Query: 158 NRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNY-----RSFPIDLVREIARQLLEC 211
                          + +V +     SL+D+L +            +     +A   +E 
Sbjct: 61  GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEI 120

Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           +       + H DLK +N+L+  +    + D                      + V    
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADL--------------------GLAVRHDS 160

Query: 272 STTYERPDQNYIVSTRHYRAPEVILG------LGWTYPCDIWSVGCILVELCTGEALFQT 325
           +T       N+ V T+ Y APEV+               DI+++G +  E+    ++   
Sbjct: 161 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 220

Query: 326 HENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ 385
           HE+ +          P  + M K V        ++ R + P    S E+++ + K     
Sbjct: 221 HEDYQLPYYDLVPSDPSVEEMRKVVCE------QKLRPNIPNRWQSCEALRVMAK----- 269

Query: 386 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 422
                           +++     +   RLTA    +
Sbjct: 270 ----------------IMRECWYANGAARLTALRIKK 290

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (286), Expect = 2e-29
 Identities = 62/351 (17%), Positives = 116/351 (33%), Gaps = 98/351 (27%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVR--GIKKYREAAMIEIEVLQQ 149
           +R      +G G FG+V+E         +    VA+K+++       REA M E++VL  
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 150 LAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRK----------------NN 192
           L  H       V +           ++ E      L +FLR+                ++
Sbjct: 83  LGNHM----NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 138

Query: 193 YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD 252
             +  ++ +   + Q+ + +AF+     IH DL   N+LL      K+ D+  +     D
Sbjct: 139 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 198

Query: 253 SSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCI 312
           S+Y                        +        + APE I    +T+  D+WS G  
Sbjct: 199 SNYVV----------------------KGNARLPVKWMAPESIFNCVYTFESDVWSYGIF 236

Query: 313 LVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRG-RLDWPEGAAS 371
           L EL +  +       ++                         K ++ G R+  PE    
Sbjct: 237 LWELFSLGSSPYPGMPVDSKFY---------------------KMIKEGFRMLSPE---- 271

Query: 372 RESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 422
                                 H+  ++  +++     DP  R T ++ ++
Sbjct: 272 ----------------------HAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  114 bits (285), Expect = 3e-29
 Identities = 58/337 (17%), Positives = 110/337 (32%), Gaps = 78/337 (23%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDR---ERKEMVAIKIVRG--IKKYREAAMIEIEVL 147
           E   S  KI   +G G FG+V     +   +R+  VAIK ++    +K R   + E  ++
Sbjct: 22  EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM 81

Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQ 207
            Q   H       + +         + I+ E + +   D   + N   F +  +  + R 
Sbjct: 82  GQF-DHPN----VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRG 136

Query: 208 LLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKV 267
           +   + ++ D+  +H DL   N+L+ S+   KV D+  S                   + 
Sbjct: 137 IAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLS-------------------RF 177

Query: 268 IDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTH 326
           ++  ++               + APE I    +T   D+WS G ++ E+ + GE  +   
Sbjct: 178 LEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 237

Query: 327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 386
            N + +  +E                      +  RL  P    S               
Sbjct: 238 TNQDVINAIE----------------------QDYRLPPPMDCPS--------------- 260

Query: 387 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 423
                       L  L+    + D   R    + +  
Sbjct: 261 -----------ALHQLMLDCWQKDRNHRPKFGQIVNT 286

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (276), Expect = 2e-28
 Identities = 51/326 (15%), Positives = 104/326 (31%), Gaps = 78/326 (23%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGN 158
                ++G G FG V     R + + VAIK+++      +  + E +V+  L  H+    
Sbjct: 6   LTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAKVMMNL-SHE---- 59

Query: 159 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 218
           + VQ+      +  I I+ E + +       +     F    + E+ + + E + ++   
Sbjct: 60  KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 119

Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
             +H DL   N L+     +KV D+  S +   D                          
Sbjct: 120 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG------------------- 160

Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMER 337
                     +  PEV++   ++   DIW+ G ++ E+ + G+  ++   N E    + +
Sbjct: 161 ----SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ 216

Query: 338 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 397
            L                      RL  P  A+                           
Sbjct: 217 GL----------------------RLYRPHLASE-------------------------- 228

Query: 398 DLTHLLQGLLRYDPTDRLTAREALRH 423
            +  ++         +R T +  L +
Sbjct: 229 KVYTIMYSCWHEKADERPTFKILLSN 254

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (277), Expect = 4e-28
 Identities = 62/345 (17%), Positives = 116/345 (33%), Gaps = 90/345 (26%)

Query: 98  RYKIHSKMGEGTFGQVLECWD---RERKEMVAIKIVRGIK-----KYREAAMIEIEVLQQ 149
            +++   +G G +G+V         +  ++ A+K+++        K  E    E +VL+ 
Sbjct: 25  NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 84

Query: 150 LAKHDKGGNRCVQIRNWFDYRNHICIVFE-KLGSSLYDFLRKNNYRSFPIDLVREIARQL 208
           + +        V +   F     + ++ +   G  L+  L +     F    V+    ++
Sbjct: 85  IRQS----PFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEI 138

Query: 209 LECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVI 268
           +  +  +H L +I+ D+K EN+LL S+ ++ + D+  S                      
Sbjct: 139 VLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF------------------- 179

Query: 269 DFGSTTYERPDQNYIVSTRHYRAPEVILGL--GWTYPCDIWSVGCILVELCTGEALFQTH 326
                  E         T  Y AP+++ G   G     D WS+G ++ EL TG + F   
Sbjct: 180 ----VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD 235

Query: 327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN 386
                 A + R                    + +    +P+  ++               
Sbjct: 236 GEKNSQAEISR-------------------RILKSEPPYPQEMSA--------------- 261

Query: 387 LIMQHVDHSAGDLTHLLQGLLRYDPTDRL-----TAREALRHPFF 426
                          L+Q LL  DP  RL      A E   H FF
Sbjct: 262 -----------LAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 295

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (274), Expect = 6e-28
 Identities = 67/333 (20%), Positives = 115/333 (34%), Gaps = 85/333 (25%)

Query: 104 KMGEGTFGQVLECWDRERKE--MVAIKIVR--GIKKYREAAMIEIEVLQQLAKHDKGGNR 159
           ++G G FG V +   R RK+   VAIK+++    K   E  M E +++ QL  +      
Sbjct: 16  ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNP----Y 70

Query: 160 CVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 218
            V++         + +V E   G  L+ FL        P+  V E+  Q+   + ++ + 
Sbjct: 71  IVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEK 128

Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
             +H DL   NVLLV+  Y K+ D+  S     D SY+                      
Sbjct: 129 NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR------------------- 169

Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE-LCTGEALFQTHENLEHLAMMER 337
             +       + APE I    ++   D+WS G  + E L  G+  ++  +  E +A +E+
Sbjct: 170 --SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 227

Query: 338 VLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAG 397
                                   R++ P               P L  L+         
Sbjct: 228 GK----------------------RMECPPECP-----------PELYALMSD------- 247

Query: 398 DLTHLLQGLLRYDPTDRLTARE---ALRHPFFT 427
                      Y   DR         +R  +++
Sbjct: 248 --------CWIYKWEDRPDFLTVEQRMRACYYS 272

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (272), Expect = 1e-27
 Identities = 45/262 (17%), Positives = 93/262 (35%), Gaps = 34/262 (12%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDR----ERKEMVAIKIVRG--IKKYREAAMIEIEVLQQL 150
           S       +G G FG+V +   +    +++  VAIK ++    +K R   + E  ++ Q 
Sbjct: 7   SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 66

Query: 151 AKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
           + H       +++         + I+ E + +   D   +     F +  +  + R +  
Sbjct: 67  SHH-----NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAA 121

Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++ ++  +H DL   N+L+ S+   KV D+  S     D                  
Sbjct: 122 GMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT----------- 170

Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                     +       + APE I    +T   D+WS G ++ E+ T         +  
Sbjct: 171 ----------SGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH 220

Query: 331 HL--AMMERVLGPLPQHMLKRV 350
            +  A+ +    P P      +
Sbjct: 221 EVMKAINDGFRLPTPMDCPSAI 242

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (266), Expect = 1e-26
 Identities = 54/351 (15%), Positives = 106/351 (30%), Gaps = 97/351 (27%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDR-------ERKEMVAIKIVR--GIKKYREAAMIEIEVL 147
            R  +   +GEG FGQV+             R   VA+K+++    +K     + E+E++
Sbjct: 13  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72

Query: 148 QQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLR--------------KNN 192
           + + KH       + +         + ++ E     +L ++L+               N 
Sbjct: 73  KMIGKH----KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 128

Query: 193 YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD 252
                   +   A Q+   + ++     IH DL   NVL+     +K+ D+  +      
Sbjct: 129 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 188

Query: 253 SSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCI 312
             Y K                               + APE +    +T+  D+WS G +
Sbjct: 189 DYYKKTT----------------------NGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 226

Query: 313 LVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASR 372
           L E+ T          +E L                      +      R+D P    + 
Sbjct: 227 LWEIFTLGGSPYPGVPVEEL---------------------FKLLKEGHRMDKPSNCTN- 264

Query: 373 ESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 423
                                    +L  +++      P+ R T ++ +  
Sbjct: 265 -------------------------ELYMMMRDCWHAVPSQRPTFKQLVED 290

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  105 bits (263), Expect = 2e-26
 Identities = 54/360 (15%), Positives = 101/360 (28%), Gaps = 104/360 (28%)

Query: 93  ENLTSRYKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVR--GIKKYREAAMIEIE 145
           E   +  +    +GEG FG+V +         E   MVA+K+++       +     E  
Sbjct: 9   EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 68

Query: 146 VLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRS--------- 195
           ++ +           V++         +C++FE +    L +FLR  +  +         
Sbjct: 69  LMAEFDNP-----NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDL 123

Query: 196 -------------FPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPD 242
                                IARQ+   +A++ +   +H DL   N L+  +  +K+ D
Sbjct: 124 STRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIAD 183

Query: 243 YKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTY 302
           +  S +      Y                                 +  PE I    +T 
Sbjct: 184 FGLSRNIYSADYYKADGN----------------------DAIPIRWMPPESIFYNRYTT 221

Query: 303 PCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGR 362
             D+W+ G +L E+ +           E +                              
Sbjct: 222 ESDVWAYGVVLWEIFSYGLQPYYGMAHEEV---------------------IYYVRDGNI 260

Query: 363 LDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR 422
           L  PE                              +L +L++      P DR +     R
Sbjct: 261 LACPENCPL--------------------------ELYNLMRLCWSKLPADRPSFCSIHR 294

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (261), Expect = 3e-26
 Identities = 54/332 (16%), Positives = 92/332 (27%), Gaps = 81/332 (24%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERKE---MVAIKIVRGI--KKYREAAMIEIEVLQQLA 151
            R ++   +GEG FG V +      +     VAIK  +       RE  + E   ++Q  
Sbjct: 7   ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF- 65

Query: 152 KHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLEC 211
            H       V++       N + I+ E           +    S  +  +   A QL   
Sbjct: 66  DHP----HIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 120

Query: 212 IAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG 271
           +A++     +H D+   NVL+ S++ +K+ D+  S +    + Y                
Sbjct: 121 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK------------ 168

Query: 272 STTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH 331
                            + APE I    +T   D+W  G  + E+               
Sbjct: 169 -----------GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 217

Query: 332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH 391
           +                       +     RL  P                         
Sbjct: 218 V---------------------IGRIENGERLPMPPNCPP-------------------- 236

Query: 392 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 423
                  L  L+     YDP+ R    E    
Sbjct: 237 ------TLYSLMTKCWAYDPSRRPRFTELKAQ 262

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (263), Expect = 3e-26
 Identities = 44/325 (13%), Positives = 83/325 (25%), Gaps = 76/325 (23%)

Query: 104 KMGEGTFGQVLECWDRE---RKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGN 158
            +G G FG V      +   +K   A+K +  I         + E  +++    H    N
Sbjct: 34  VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHP---N 89

Query: 159 RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDL 218
               +           +V   +         +N   +  +  +     Q+ + + F+   
Sbjct: 90  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 149

Query: 219 CMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERP 278
             +H DL   N +L     +KV D+  +                +               
Sbjct: 150 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA--------------- 194

Query: 279 DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERV 338
                     + A E +    +T   D+WS G +L EL T  A      N   +      
Sbjct: 195 -----KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI------ 243

Query: 339 LGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGD 398
                              ++  RL  PE                          +    
Sbjct: 244 ---------------TVYLLQGRRLLQPE--------------------------YCPDP 262

Query: 399 LTHLLQGLLRYDPTDRLTAREALRH 423
           L  ++          R +  E +  
Sbjct: 263 LYEVMLKCWHPKAEMRPSFSELVSR 287

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (259), Expect = 1e-25
 Identities = 55/352 (15%), Positives = 111/352 (31%), Gaps = 96/352 (27%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVR--GIKKYREAAMIEIEVLQQ 149
            +  +  ++G+G+FG V E   +     E +  VAIK V      + R   + E  V+++
Sbjct: 20  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 79

Query: 150 LAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-GSSLYDFLRKNNYRS--------FPIDL 200
              H       V++           ++ E +    L  +LR                +  
Sbjct: 80  FNCH-----HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 134

Query: 201 VREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMP 260
           + ++A ++ + +A+++    +H DL   N ++     +K+ D+  +    +   Y K   
Sbjct: 135 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 194

Query: 261 KSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE 320
                                  +    + +PE +    +T   D+WS G +L E+ T  
Sbjct: 195 ----------------------GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA 232

Query: 321 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK 380
                  + E +                         +  G LD P              
Sbjct: 233 EQPYQGLSNEQV---------------------LRFVMEGGLLDKP-------------- 257

Query: 381 LPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR------HPFF 426
                       D+    L  L++   +Y+P  R +  E +        P F
Sbjct: 258 ------------DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF 297

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (256), Expect = 1e-25
 Identities = 42/255 (16%), Positives = 93/255 (36%), Gaps = 35/255 (13%)

Query: 98  RYKIHSKMGEGTFGQVLECWDRE---RKEMVAIKIVR----GIKKYREAAMIEIEVLQQL 150
             ++  K+G+G+FG V          +   VA+K ++       +  +  + E+  +  L
Sbjct: 9   DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68

Query: 151 AKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
             H       +++         + +V E           + +   F +  +   A Q+ E
Sbjct: 69  -DHRN----LIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE 122

Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++     IH DL   N+LL + + +K+ D+      P++  ++              
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM------------ 170

Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL 329
                    Q +      + APE +    +++  D W  G  L E+ T G+  +      
Sbjct: 171 ---------QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS 221

Query: 330 EHLAMMERVLGPLPQ 344
           + L  +++    LP+
Sbjct: 222 QILHKIDKEGERLPR 236

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (256), Expect = 3e-25
 Identities = 50/333 (15%), Positives = 97/333 (29%), Gaps = 85/333 (25%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAA--------MIEIEVLQQL 150
           +K    +G G FG V +       E V I +   IK+ REA         + E  V+  +
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVA--IKELREATSPKANKEILDEAYVMASV 68

Query: 151 AKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLE 210
             +        ++           I        L D++R++   +     +     Q+ +
Sbjct: 69  -DNP----HVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAK 122

Query: 211 CIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDF 270
            + ++ D  ++H DL   NVL+ + +++K+ D+  +     +   +              
Sbjct: 123 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA------------ 170

Query: 271 GSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE 330
                             + A E IL   +T+  D+WS G  + EL T  +         
Sbjct: 171 ----------EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS 220

Query: 331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ 390
            +                     +    +  RL  P                        
Sbjct: 221 EI---------------------SSILEKGERLPQPPICTI------------------- 240

Query: 391 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 423
                  D+  ++      D   R   RE +  
Sbjct: 241 -------DVYMIMVKCWMIDADSRPKFRELIIE 266

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =   99 bits (248), Expect = 3e-24
 Identities = 56/350 (16%), Positives = 108/350 (30%), Gaps = 95/350 (27%)

Query: 97  SRYKIHSKMGEGTFGQVLECWDRERK-----EMVAIKIVR--GIKKYREAAMIEIEVLQQ 149
            R K+   +G G FGQV+E              VA+K+++         A M E+++L  
Sbjct: 13  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 72

Query: 150 LAKHDKGGNRCVQIRN-WFDYRNHICIVFEKL-GSSLYDFLRKNNY-------------- 193
           +  H       V +          + ++ E     +L  +LR                  
Sbjct: 73  IGHH----LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 128

Query: 194 RSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS 253
               ++ +   + Q+ + + F+     IH DL   N+LL     +K+ D+  +    KD 
Sbjct: 129 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 188

Query: 254 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCIL 313
            Y ++                              + APE I    +T   D+WS G +L
Sbjct: 189 DYVRK----------------------GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 226

Query: 314 VELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRE 373
            E+ +  A                    + +   +R+                       
Sbjct: 227 WEIFSLGASPYPGVK-------------IDEEFCRRLK---------------------- 251

Query: 374 SIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH 423
                      +   M+  D++  ++   +      +P+ R T  E + H
Sbjct: 252 -----------EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 290

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 66.7 bits (162), Expect = 1e-13
 Identities = 33/223 (14%), Positives = 63/223 (28%), Gaps = 39/223 (17%)

Query: 99  YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVR-GIKKYREAAMIEIEVLQQLAKHDKGG 157
             I   MGEG    V  C+  +  E   +K  + G   +++            +      
Sbjct: 2   DAIGKLMGEGKESAVFNCYSEKFGE-CVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRS 60

Query: 158 NR-CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMH 216
            R   +            +   +  + L + +         ++   E+   +LE +A  +
Sbjct: 61  ARNEFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFY 120

Query: 217 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFG-STTY 275
              ++H DL   NVL+                                I +IDF  S   
Sbjct: 121 HRGIVHGDLSQYNVLVSEEG----------------------------IWIIDFPQSVEV 152

Query: 276 ERPDQNYIVSTRHYRAPEVIL---GLGWTYPCDIWSVGCILVE 315
                  I+     R    I+      +    DI S    +++
Sbjct: 153 GEEGWREIL----ERDVRNIITYFSRTYRTEKDINSAIDRILQ 191

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} Length = 395

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 42.1 bits (98), Expect = 8e-05
 Identities = 24/172 (13%), Positives = 49/172 (28%), Gaps = 10/172 (5%)

Query: 100 KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNR 159
           K++     G   + +        E+    +       + A  +      ++    +    
Sbjct: 109 KLYGIFSGGRLEEYIPSRPLSCHEISLAHMST-----KIAKRVAKVHQLEVPIWKEPDYL 163

Query: 160 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC 219
           C  ++ W            +        +   N     +DL RE+             + 
Sbjct: 164 CEALQRWLKQLTGTVDAEHRFDLPEECGVSSVNC----LDLARELEFLRAHISLSKSPVT 219

Query: 220 MIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK-DSSYFKRMPKSSAIKVIDF 270
             H DL+  N+LL  +    +     S  T    +S     P    + +IDF
Sbjct: 220 FCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDF 271

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	433
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.92
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.32
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	98.0
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.75
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	97.72
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	97.16
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	96.81

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-61  Score=447.62  Aligned_cols=249  Identities=24%  Similarity=0.436  Sum_probs=211.8

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++++.||+|+||+||+|+++.+++.||+|++.+..    .....+.+|+.+++.+     +||||+++++++.+++.
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~~~~~~~~~~~   80 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-----RHPNILRLYGYFHDATR   80 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-----CCTTBCCEEEEEECSSE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhc-----CCCCCCeEEEEEEECCE
Confidence            57999999999999999999999999999999986422    2345677899999888     77999999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +||||||+ +|+|.+++...+  .+++..++.++.||+.||+|||++|||||||||+|||++.+                
T Consensus        81 ~~ivmEy~~~g~L~~~l~~~~--~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~----------------  142 (263)
T d2j4za1          81 VYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA----------------  142 (263)
T ss_dssp             EEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT----------------
T ss_pred             EEEEEeecCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCC----------------
Confidence            99999999 899999998765  79999999999999999999999999999999999999544                


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCC-CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                                 +.+||+|||++....... ...+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+..+
T Consensus       143 -----------~~~kl~DFG~a~~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~  211 (263)
T d2j4za1         143 -----------GELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE  211 (263)
T ss_dssp             -----------SCEEECCCCSCSCCCCCCCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred             -----------CCEeecccceeeecCCCcccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHH
Confidence                       456666666665443322 33579999999999999999999999999999999999999998877666


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      .+..+..                       +.+.                          .++.+++++++||.+||+.|
T Consensus       212 ~~~~i~~-----------------------~~~~--------------------------~p~~~s~~~~~li~~~L~~d  242 (263)
T d2j4za1         212 TYKRISR-----------------------VEFT--------------------------FPDFVTEGARDLISRLLKHN  242 (263)
T ss_dssp             HHHHHHT-----------------------TCCC--------------------------CCTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHHHc-----------------------CCCC--------------------------CCccCCHHHHHHHHHHccCC
Confidence            5544322                       1111                          12356788999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCC
Q 013973          411 PTDRLTAREALRHPFFTR  428 (433)
Q Consensus       411 P~~R~ta~ell~hp~f~~  428 (433)
                      |++|||++|+|+||||+.
T Consensus       243 p~~R~t~~eil~hp~~~~  260 (263)
T d2j4za1         243 PSQRPMLREVLEHPWITA  260 (263)
T ss_dssp             GGGSCCHHHHHTCHHHHH
T ss_pred             HhHCcCHHHHHcCcCcCC
Confidence            999999999999999964

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-61  Score=449.52  Aligned_cols=255  Identities=24%  Similarity=0.364  Sum_probs=206.0

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      .++|++++.||+|+||+||+|+++.+|+.||||+++...  ...+.+.+|+.+++++     +||||+++++++.+.+.+
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l-----~HpnIv~~~~~~~~~~~~   78 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-----NHENVVKFYGHRREGNIQ   78 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTC-----CCTTBCCEEEEEEETTEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhC-----CCCCEeeEeeeeccCcee
Confidence            367999999999999999999999999999999986432  2345678899999888     779999999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      ||||||+ ||+|.++|....  .+++.+++.++.||+.||+|||++|||||||||+|||+++                  
T Consensus        79 ~ivmEy~~gg~L~~~l~~~~--~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~------------------  138 (271)
T d1nvra_          79 YLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE------------------  138 (271)
T ss_dssp             EEEEECCTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT------------------
T ss_pred             EEEEeccCCCcHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECC------------------
Confidence            9999999 889999997644  7999999999999999999999999999999999999954                  


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhCCCC-CCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                               ++.+||+|||+|+.....     ....+||+.|||||++.+..+ +.++|||||||++|||++|++||...
T Consensus       139 ---------~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~  209 (271)
T d1nvra_         139 ---------RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP  209 (271)
T ss_dssp             ---------TCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSS
T ss_pred             ---------CCCEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCC
Confidence                     445667777766543221     234589999999999998876 57899999999999999999999765


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      ...............                      .                        ...+..+++++.+||.+|
T Consensus       210 ~~~~~~~~~~~~~~~----------------------~------------------------~~~~~~~s~~~~~li~~~  243 (271)
T d1nvra_         210 SDSCQEYSDWKEKKT----------------------Y------------------------LNPWKKIDSAPLALLHKI  243 (271)
T ss_dssp             STTSHHHHHHHTTCT----------------------T------------------------STTGGGSCHHHHHHHHHH
T ss_pred             ChHHHHHHHHhcCCC----------------------C------------------------CCccccCCHHHHHHHHHH
Confidence            443222111100000                      0                        001234577899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      |+.||++|||++|+|+||||++.-
T Consensus       244 L~~dP~~R~t~~eil~hpwf~~~l  267 (271)
T d1nvra_         244 LVENPSARITIPDIKKDRWYNKPL  267 (271)
T ss_dssp             SCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred             cCCChhHCcCHHHHhcCHhhCcCC
Confidence            999999999999999999998643

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-60  Score=448.26  Aligned_cols=252  Identities=26%  Similarity=0.414  Sum_probs=213.3

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      ++|++++.||+|+||+||+|+++.+|+.||||+++... ...+.+.+|+.+++++     +||||+++++++.+.+.+||
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~~~~~~~~~~~~~i   94 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-----KNPNIVNYLDSYLVGDELWV   94 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHC-----CCTTBCCEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhC-----CCCCEeeEeEEEEECCEEEE
Confidence            57999999999999999999999999999999987433 3456678899999988     77999999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      ||||+ ||+|.+++.+.   .+++.+++.|+.||+.||+|||++|||||||||+|||++.                    
T Consensus        95 vmEy~~gg~L~~~~~~~---~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~--------------------  151 (293)
T d1yhwa1          95 VMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM--------------------  151 (293)
T ss_dssp             EEECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT--------------------
T ss_pred             EEEecCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECC--------------------
Confidence            99999 89999988764   5999999999999999999999999999999999999954                    


Q ss_pred             ccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                             ++.+||+|||++......   ....+||+.|||||++.+..|+.++|||||||++|+|++|..||.+.+..+.
T Consensus       152 -------~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~  224 (293)
T d1yhwa1         152 -------DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA  224 (293)
T ss_dssp             -------TCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred             -------CCcEeeccchhheeeccccccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHH
Confidence                   456777777777654322   2345799999999999999999999999999999999999999998777665


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      +..+.....+.                      .                        ..+..++.++++||.+||+.||
T Consensus       225 ~~~~~~~~~~~----------------------~------------------------~~~~~~s~~~~~li~~~L~~dP  258 (293)
T d1yhwa1         225 LYLIATNGTPE----------------------L------------------------QNPEKLSAIFRDFLNRCLDMDV  258 (293)
T ss_dssp             HHHHHHHCSCC----------------------C------------------------SSGGGSCHHHHHHHHHHTCSST
T ss_pred             HHHHHhCCCCC----------------------C------------------------CCcccCCHHHHHHHHHHccCCh
Confidence            54433221110                      0                        0123567889999999999999


Q ss_pred             CCCCCHHHHhcCCCCCCC
Q 013973          412 TDRLTAREALRHPFFTRD  429 (433)
Q Consensus       412 ~~R~ta~ell~hp~f~~~  429 (433)
                      ++|||++|+|+||||+..
T Consensus       259 ~~R~s~~eil~Hp~~~~~  276 (293)
T d1yhwa1         259 EKRGSAKELLQHQFLKIA  276 (293)
T ss_dssp             TTSCCHHHHTTCGGGGGC
T ss_pred             hHCcCHHHHhcCHhhCCC
Confidence            999999999999999743

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.3e-60  Score=452.24  Aligned_cols=262  Identities=25%  Similarity=0.454  Sum_probs=207.5

Q ss_pred             CceecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch--hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           92 GENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK--KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        92 ~~~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      .+.+.+.|++.+.||+|+||+||+|+++.+++.||||++....  .....+.+|+.+++.+     +||||+++++++.+
T Consensus         4 ~edi~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l-----~HpnIv~l~~~~~~   78 (307)
T d1a06a_           4 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKI-----KHPNIVALDDIYES   78 (307)
T ss_dssp             CSCGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTC-----CCTTBCCEEEEEEC
T ss_pred             CCCCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhC-----CCCCCCcEEEEEEE
Confidence            3456778999999999999999999999999999999997432  2334566899999888     67999999999999


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      ++.+||||||| ||+|.++|...+  .+++.++..++.||+.||+|||++|||||||||+|||+...             
T Consensus        79 ~~~~~lvmE~~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~-------------  143 (307)
T d1a06a_          79 GGHLYLIMQLVSGGELFDRIVEKG--FYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSL-------------  143 (307)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHTCS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSS-------------
T ss_pred             CCEEEEEEeccCCCcHHHhhhccc--CCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeeccc-------------
Confidence            99999999999 899999998754  79999999999999999999999999999999999999531             


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                                 +.++.+||+|||++.......  ...+||+.|||||++.+..|+.++|||||||++|||++|.+||.+.
T Consensus       144 -----------~~~~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~  212 (307)
T d1a06a_         144 -----------DEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE  212 (307)
T ss_dssp             -----------STTCCEEECCC------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             -----------CCCceEEEeccceeEEccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCC
Confidence                       345678888888887554332  3468999999999999999999999999999999999999999987


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      +..+....+......                       .+.                      ..+..+++++.+||.+|
T Consensus       213 ~~~~~~~~i~~~~~~-----------------------~~~----------------------~~~~~~s~~~~~li~~~  247 (307)
T d1a06a_         213 NDAKLFEQILKAEYE-----------------------FDS----------------------PYWDDISDSAKDFIRHL  247 (307)
T ss_dssp             SHHHHHHHHHTTCCC-----------------------CCT----------------------TTTTTSCHHHHHHHHHH
T ss_pred             CHHHHHHHHhccCCC-----------------------CCC----------------------ccccCCCHHHHHHHHHH
Confidence            776655543321111                       110                      12246788999999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      |++||++|||++|+|+||||++.
T Consensus       248 L~~dP~~R~s~~eil~hp~~~~~  270 (307)
T d1a06a_         248 MEKDPEKRFTCEQALQHPWIAGD  270 (307)
T ss_dssp             SCSSGGGSCCHHHHHHSTTTTSS
T ss_pred             ccCCHhHCcCHHHHhcCHhhCCC
Confidence            99999999999999999999854

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-59  Score=443.18  Aligned_cols=262  Identities=25%  Similarity=0.461  Sum_probs=222.7

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-------hhHHHHHHHHHHHHHHHhcCCCCCceEEecce
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  166 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~  166 (433)
                      .+.++|++++.||+|+||+||+|+++.+|+.||||++++..       ...+.+.+|+.+++++     +||||++++++
T Consensus         7 ~i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~~~~~   81 (293)
T d1jksa_           7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-----QHPNVITLHEV   81 (293)
T ss_dssp             CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-----CCTTBCCEEEE
T ss_pred             CcccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhC-----CCCCCCcEEEE
Confidence            35678999999999999999999999999999999986321       2356788999999998     67999999999


Q ss_pred             eecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcC
Q 013973          167 FDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  245 (433)
Q Consensus       167 ~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~  245 (433)
                      +.+.+.+||||||| ||+|.++|...+  .+++..++.++.||+.||+|||++|||||||||+|||++.++         
T Consensus        82 ~~~~~~~~iv~E~~~gg~L~~~i~~~~--~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~---------  150 (293)
T d1jksa_          82 YENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRN---------  150 (293)
T ss_dssp             EECSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSS---------
T ss_pred             EEECCEEEEEEEcCCCccccchhcccc--ccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCC---------
Confidence            99999999999999 899999998765  799999999999999999999999999999999999997654         


Q ss_pred             CCCCCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 013973          246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALF  323 (433)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf  323 (433)
                                    .....+||+|||++.......  ....||+.|+|||++.+..|+.++|||||||++|||++|..||
T Consensus       151 --------------~~~~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf  216 (293)
T d1jksa_         151 --------------VPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF  216 (293)
T ss_dssp             --------------SSSCCEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             --------------CcccceEecchhhhhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCC
Confidence                          234468999999987654332  3468999999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      .+.+..+.+..+.......+.                                             ..+..++.++++||
T Consensus       217 ~~~~~~~~~~~i~~~~~~~~~---------------------------------------------~~~~~~s~~~~~li  251 (293)
T d1jksa_         217 LGDTKQETLANVSAVNYEFED---------------------------------------------EYFSNTSALAKDFI  251 (293)
T ss_dssp             CCSSHHHHHHHHHTTCCCCCH---------------------------------------------HHHTTSCHHHHHHH
T ss_pred             CCCCHHHHHHHHHhcCCCCCc---------------------------------------------hhcCCCCHHHHHHH
Confidence            988877766554332222221                                             12245678999999


Q ss_pred             HhccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          404 QGLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      .+||+.||++|||++|+|+||||+...
T Consensus       252 ~~~L~~dP~~R~s~~eil~hp~~~~~~  278 (293)
T d1jksa_         252 RRLLVKDPKKRMTIQDSLQHPWIKPKD  278 (293)
T ss_dssp             HTTSCSSGGGSCCHHHHHHSTTTCC--
T ss_pred             HHHccCChhHCcCHHHHhcCcccCCCC
Confidence            999999999999999999999998654

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=2.5e-59  Score=452.69  Aligned_cols=260  Identities=28%  Similarity=0.453  Sum_probs=221.4

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      +.++|++++.||+|+||+||+|+++.+|+.||||++... ....+.+.+|+.+++++     .||||+++++++.+.+.+
T Consensus        24 il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l-----~HpnIv~~~~~~~~~~~~   98 (350)
T d1koaa2          24 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL-----RHPTLVNLHDAFEDDNEM   98 (350)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHT-----CCTTBCCEEEEEEETTEE
T ss_pred             CccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhC-----CCCCCCcEEEEEEECCEE
Confidence            456899999999999999999999999999999998643 33456678899999998     679999999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      ||||||| ||+|.+++.... ..+++..++.|+.||+.||+|||++|||||||||+|||++.                  
T Consensus        99 ~ivmE~~~gg~L~~~l~~~~-~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~------------------  159 (350)
T d1koaa2          99 VMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT------------------  159 (350)
T ss_dssp             EEEECCCCSCBHHHHHTCTT-SCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS------------------
T ss_pred             EEEEEcCCCCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeecc------------------
Confidence            9999999 899999996543 36999999999999999999999999999999999999953                  


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                             +.++.+||+|||++.......  ...+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+..+
T Consensus       160 -------~~~~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~  232 (350)
T d1koaa2         160 -------KRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE  232 (350)
T ss_dssp             -------TTSCCEEECCCTTCEECCTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             -------CCCCeEEEeecchheecccccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHH
Confidence                   234678899999887655443  23689999999999999999999999999999999999999999888777


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      .+..+.......+.                                             ..+..+++++++||.+||+.|
T Consensus       233 ~~~~i~~~~~~~~~---------------------------------------------~~~~~~s~~~~~li~~~L~~d  267 (350)
T d1koaa2         233 TLRNVKSCDWNMDD---------------------------------------------SAFSGISEDGKDFIRKLLLAD  267 (350)
T ss_dssp             HHHHHHHTCCCSCC---------------------------------------------GGGGGCCHHHHHHHHHHCCSS
T ss_pred             HHHHHHhCCCCCCc---------------------------------------------ccccCCCHHHHHHHHHHccCC
Confidence            66655433222111                                             012346778999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCCC
Q 013973          411 PTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       411 P~~R~ta~ell~hp~f~~~~  430 (433)
                      |++|||++|+|+||||+...
T Consensus       268 P~~R~t~~eil~hp~~~~~~  287 (350)
T d1koaa2         268 PNTRMTIHQALEHPWLTPGN  287 (350)
T ss_dssp             GGGSCCHHHHHHSTTTSCTT
T ss_pred             hhHCcCHHHHhcCcccCCCC
Confidence            99999999999999998653

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-59  Score=442.61  Aligned_cols=251  Identities=25%  Similarity=0.418  Sum_probs=211.5

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++++.||+|+||+||+|+++.+++.||||+++...    ...+.+.+|+++++++     +||||+++++++.+.+.
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~l~~~~~~~~~   82 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-----DHPFFVKLYFTFQDDEK   82 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-----CSTTBCCEEEEEECSSE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHc-----CCCCeeEEEEEEEECCE
Confidence            57999999999999999999999999999999997432    2335678899999988     77999999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +||||||+ ||+|.+++...+  .+++..++.++.||+.||+|||++|||||||||+|||+++                 
T Consensus        83 ~~ivmEy~~gg~L~~~~~~~~--~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~-----------------  143 (288)
T d1uu3a_          83 LYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNE-----------------  143 (288)
T ss_dssp             EEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT-----------------
T ss_pred             EEEEEEccCCCCHHHhhhccC--CCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCC-----------------
Confidence            99999999 899999998765  7999999999999999999999999999999999999954                 


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                                ++.+||+|||+|+.....     ....+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.
T Consensus       144 ----------~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~  213 (288)
T d1uu3a_         144 ----------DMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG  213 (288)
T ss_dssp             ----------TSCEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ----------CceEEecccccceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCc
Confidence                      445666666666543321     12357999999999999999999999999999999999999999987


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      +..+.+..+..                       +.+.+                          +..+++++++||.+|
T Consensus       214 ~~~~~~~~i~~-----------------------~~~~~--------------------------p~~~s~~~~~li~~~  244 (288)
T d1uu3a_         214 NEYLIFQKIIK-----------------------LEYDF--------------------------PEKFFPKARDLVEKL  244 (288)
T ss_dssp             SHHHHHHHHHT-----------------------TCCCC--------------------------CTTCCHHHHHHHHTT
T ss_pred             CHHHHHHHHHc-----------------------CCCCC--------------------------CccCCHHHHHHHHHH
Confidence            77665544321                       11111                          235678899999999


Q ss_pred             cccCCCCCCCHHH------HhcCCCCCCCC
Q 013973          407 LRYDPTDRLTARE------ALRHPFFTRDH  430 (433)
Q Consensus       407 L~~dP~~R~ta~e------ll~hp~f~~~~  430 (433)
                      |+.||++|||++|      +++||||++-.
T Consensus       245 L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~  274 (288)
T d1uu3a_         245 LVLDATKRLGCEEMEGYGPLKAHPFFESVT  274 (288)
T ss_dssp             SCSSGGGSTTSGGGTCHHHHHTSGGGTTCC
T ss_pred             ccCCHhHCcCHHHHcCCHHHHcCCccCCCC
Confidence            9999999999987      58999998753

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-59  Score=443.13  Aligned_cols=254  Identities=25%  Similarity=0.462  Sum_probs=212.0

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc-hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI-KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      +.|++++.||+|+||+||+|+++.+++.||||+++.. ....+.+.+|+++++++     +||||+++++++.+.+.+||
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l-----~HpnIv~l~~~~~~~~~~~l   86 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASC-----DHPNIVKLLDAFYYENNLWI   86 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHC-----CCTTBCCEEEEEEETTEEEE
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhC-----CCCCCCeEEEEEeeCCeEEE
Confidence            4699999999999999999999999999999999643 34456778899999998     67999999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      ||||+ ||+|.+++.+.. ..+++..++.++.||+.||.|||++|||||||||+|||++                     
T Consensus        87 vmEy~~~g~L~~~~~~~~-~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~---------------------  144 (288)
T d2jfla1          87 LIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT---------------------  144 (288)
T ss_dssp             EEECCTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---------------------
T ss_pred             EEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeEC---------------------
Confidence            99999 899999987643 4699999999999999999999999999999999999994                     


Q ss_pred             ccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhh-----CCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVIL-----GLGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                            .++.+||+|||++......   ....+||+.|||||++.     +..|+.++|||||||++|||++|+.||.+.
T Consensus       145 ------~~~~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~  218 (288)
T d2jfla1         145 ------LDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL  218 (288)
T ss_dssp             ------TTSCEEECCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             ------CCCCEEEEechhhhccCCCcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCC
Confidence                  4456777777776543221   13458999999999995     456899999999999999999999999887


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      +..+.+..+.....+.                                              ...+..+++++++||.+|
T Consensus       219 ~~~~~~~~i~~~~~~~----------------------------------------------~~~~~~~s~~~~~li~~~  252 (288)
T d2jfla1         219 NPMRVLLKIAKSEPPT----------------------------------------------LAQPSRWSSNFKDFLKKC  252 (288)
T ss_dssp             CGGGHHHHHHHSCCCC----------------------------------------------CSSGGGSCHHHHHHHHHH
T ss_pred             CHHHHHHHHHcCCCCC----------------------------------------------CCccccCCHHHHHHHHHH
Confidence            7666554433211000                                              001235677899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      |+.||++|||++|+|+||||+.+
T Consensus       253 L~~dp~~R~t~~ell~hp~~~~~  275 (288)
T d2jfla1         253 LEKNVDARWTTSQLLQHPFVTVD  275 (288)
T ss_dssp             SCSSTTTSCCHHHHTTSGGGCCC
T ss_pred             ccCChhHCcCHHHHhcCcccCCC
Confidence            99999999999999999999865

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-60  Score=453.75  Aligned_cols=289  Identities=22%  Similarity=0.343  Sum_probs=210.5

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ..++|++++.||+|+||+||+|+++.+|+.||+|+++..  ......+.+|+.+|+.+     +||||++++++|.+.++
T Consensus         4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l-----~HpnIv~l~~~~~~~~~   78 (322)
T d1s9ja_           4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-----NSPYIVGFYGAFYSDGE   78 (322)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGC-----CCTTBCCEEEEEECSSE
T ss_pred             CccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhC-----CCCCCCcEEEEEEECCE
Confidence            357899999999999999999999999999999998743  34456778899999887     67999999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      +||||||+ ||+|.+++.+.+  .+++..++.++.||+.||.|||+ +|||||||||+|||++                 
T Consensus        79 ~~iVmEy~~gg~L~~~l~~~~--~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~-----------------  139 (322)
T d1s9ja_          79 ISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN-----------------  139 (322)
T ss_dssp             EEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEEC-----------------
T ss_pred             EEEEEEcCCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeEC-----------------
Confidence            99999999 899999998765  79999999999999999999997 5999999999999994                 


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCC-CCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChH
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERP-DQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENL  329 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~  329 (433)
                                .++.+||+|||+|..... .....+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+..
T Consensus       140 ----------~~~~vkl~DFGla~~~~~~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~  209 (322)
T d1s9ja_         140 ----------SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK  209 (322)
T ss_dssp             ----------TTCCEEECCCCCCHHHHHHTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTT
T ss_pred             ----------CCCCEEEeeCCCccccCCCccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH
Confidence                      455677778887764332 234568999999999999999999999999999999999999999876544


Q ss_pred             HHH-HHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhh-----hcCCchhHHHHHH
Q 013973          330 EHL-AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ-----HVDHSAGDLTHLL  403 (433)
Q Consensus       330 ~~~-~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~li  403 (433)
                      +.. ..+....+.... ....................+.  ......        .......     .....+.++.|||
T Consensus       210 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--------~~~~~~~~~~~~~~~~~s~~~~dli  278 (322)
T d1s9ja_         210 ELELMFGCQVEGDAAE-TPPRPRTPGRPLSSYGMDSRPP--MAIFEL--------LDYIVNEPPPKLPSGVFSLEFQDFV  278 (322)
T ss_dssp             HHHHHC-------------------------------CC--CCHHHH--------HHHHHTSCCCCCCBTTBCHHHHHHH
T ss_pred             HHHHHHHHHhcCCccc-CCcccccccccccccccccccc--hhHHHH--------HhhhhccCCccCccccCCHHHHHHH
Confidence            322 222222221111 0000000000000000000000  000000        0000000     0124678999999


Q ss_pred             HhccccCCCCCCCHHHHhcCCCCCC
Q 013973          404 QGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      .+||++||++||||+|+|+||||++
T Consensus       279 ~~~L~~dP~~R~ta~e~L~Hpf~~~  303 (322)
T d1s9ja_         279 NKCLIKNPAERADLKQLMVHAFIKR  303 (322)
T ss_dssp             HHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred             HHHcCCChhHCcCHHHHhhCHhhCc
Confidence            9999999999999999999999974

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.8e-59  Score=445.97  Aligned_cols=250  Identities=24%  Similarity=0.421  Sum_probs=213.9

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++++.||+|+||.||+|+++.+|+.||||++++..    ...+.+..|+.+|+.+     +||||+++++++++.+.
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-----~hp~Iv~l~~~~~~~~~   79 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-----RHPFLTALKYAFQTHDR   79 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-----CCTTBCCEEEEEECSSE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhC-----CCCCEEEEEeeeccccc
Confidence            57999999999999999999999999999999997432    2345677899998887     78999999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +|+||||+ ||+|.+++...+  .+++..++.++.||+.||+|||++|||||||||+|||++.                 
T Consensus        80 ~~iv~ey~~gg~L~~~~~~~~--~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~-----------------  140 (337)
T d1o6la_          80 LCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDK-----------------  140 (337)
T ss_dssp             EEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT-----------------
T ss_pred             cccceeccCCCchhhhhhccc--CCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecC-----------------
Confidence            99999999 999999998865  7999999999999999999999999999999999999954                 


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                                ++.+||+|||+|+.....   ....+||+.|||||++.+..|+.++|||||||++|||++|.+||.+.+.
T Consensus       141 ----------~g~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~  210 (337)
T d1o6la_         141 ----------DGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH  210 (337)
T ss_dssp             ----------TSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             ----------CCCEEEeecccccccccCCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCH
Confidence                      456667777766543322   2346899999999999999999999999999999999999999998877


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      .+.+..+...                       .+.                          ++..+++++++||.+||+
T Consensus       211 ~~~~~~i~~~-----------------------~~~--------------------------~p~~~s~~~~dli~~~L~  241 (337)
T d1o6la_         211 ERLFELILME-----------------------EIR--------------------------FPRTLSPEAKSLLAGLLK  241 (337)
T ss_dssp             HHHHHHHHHC-----------------------CCC--------------------------CCTTSCHHHHHHHHHHTC
T ss_pred             HHHHHHHhcC-----------------------CCC--------------------------CCccCCHHHHHHHHhhcc
Confidence            6655443221                       111                          233578899999999999


Q ss_pred             cCCCCCC-----CHHHHhcCCCCCCC
Q 013973          409 YDPTDRL-----TAREALRHPFFTRD  429 (433)
Q Consensus       409 ~dP~~R~-----ta~ell~hp~f~~~  429 (433)
                      +||.+|+     ++.|+++||||++.
T Consensus       242 ~dP~~R~~~~~~~~~eil~Hp~f~~i  267 (337)
T d1o6la_         242 KDPKQRLGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             SSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             CCchhhcccccccHHHHHcCcccccC
Confidence            9999999     49999999999764

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=6.7e-59  Score=450.04  Aligned_cols=258  Identities=26%  Similarity=0.472  Sum_probs=220.6

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      .++|++++.||+|+||+||+|+++.+|+.||||+++... .....+.+|+.+++++     .||||++++++|.+++.+|
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-----~HpnIv~~~~~~~~~~~~~  102 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL-----HHPKLINLHDAFEDKYEMV  102 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-----CSTTBCCEEEEEECSSEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhC-----CCCCCCcEEEEEEECCEEE
Confidence            367999999999999999999999999999999987533 3445667899999887     6799999999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      |||||| ||+|.+++...+ .++++.+++.++.||+.||+|||++|||||||||+|||++.                   
T Consensus       103 ivmE~~~gg~L~~~~~~~~-~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~-------------------  162 (352)
T d1koba_         103 LILEFLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET-------------------  162 (352)
T ss_dssp             EEEECCCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-------------------
T ss_pred             EEEEcCCCChHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccc-------------------
Confidence            999999 899999876543 46999999999999999999999999999999999999953                   


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                            ..++.+||+|||+|.......  ...+||+.|||||++.+..|+.++|||||||++|||++|..||.+.+..+.
T Consensus       163 ------~~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~  236 (352)
T d1koba_         163 ------KKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET  236 (352)
T ss_dssp             ------TTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH
T ss_pred             ------cCCCeEEEeecccceecCCCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                  245678999999988765544  235899999999999999999999999999999999999999998888776


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      +..+.......+                       .                      ..+..+++++.+||.+||++||
T Consensus       237 ~~~i~~~~~~~~-----------------------~----------------------~~~~~~s~~~~~li~~~L~~dp  271 (352)
T d1koba_         237 LQNVKRCDWEFD-----------------------E----------------------DAFSSVSPEAKDFIKNLLQKEP  271 (352)
T ss_dssp             HHHHHHCCCCCC-----------------------S----------------------STTTTSCHHHHHHHHTTSCSSG
T ss_pred             HHHHHhCCCCCC-----------------------c----------------------ccccCCCHHHHHHHHHHccCCh
Confidence            665543322221                       1                      1123567899999999999999


Q ss_pred             CCCCCHHHHhcCCCCCCC
Q 013973          412 TDRLTAREALRHPFFTRD  429 (433)
Q Consensus       412 ~~R~ta~ell~hp~f~~~  429 (433)
                      .+|||++|+|+||||+..
T Consensus       272 ~~R~s~~eil~Hp~~~~~  289 (352)
T d1koba_         272 RKRLTVHDALEHPWLKGD  289 (352)
T ss_dssp             GGSCCHHHHHTSTTTSSC
T ss_pred             hHCcCHHHHhcCHhhCCC
Confidence            999999999999999864

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-58  Score=432.62  Aligned_cols=250  Identities=24%  Similarity=0.432  Sum_probs=205.3

Q ss_pred             CcE-EEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec---
Q 013973           97 SRY-KIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY---  169 (433)
Q Consensus        97 ~~~-~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~---  169 (433)
                      ++| ++.++||+|+||+||+|.++.+++.||+|++...   ....+.+.+|+++++++     +||||+++++++.+   
T Consensus         8 gry~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~~~~~~~~~~~   82 (270)
T d1t4ha_           8 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-----QHPNIVRFYDSWESTVK   82 (270)
T ss_dssp             SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEEEEESS
T ss_pred             CCEEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhC-----CCCCeeeEEEEEeeccc
Confidence            445 7888999999999999999999999999998643   23445677899999888     67999999999865   


Q ss_pred             -CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCceEeeccCccccCCCcC
Q 013973          170 -RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLC--MIHTDLKPENVLLVSSEYIKVPDYKS  245 (433)
Q Consensus       170 -~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~--ivHrDlKp~NILl~~~~~~~i~dfg~  245 (433)
                       ...+||||||+ +|+|.+++.+..  .+++..++.++.||+.||+|||+++  ||||||||+|||++            
T Consensus        83 ~~~~~~ivmE~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~------------  148 (270)
T d1t4ha_          83 GKKCIVLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT------------  148 (270)
T ss_dssp             SCEEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES------------
T ss_pred             cCCEEEEEEeCCCCCcHHHHHhccc--cccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceee------------
Confidence             45789999999 999999998765  7999999999999999999999999  99999999999994            


Q ss_pred             CCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 013973          246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                                    +.++.+||+|||+++...... ...+||+.|||||++.+ .|+.++|||||||++|||++|+.||.
T Consensus       149 --------------~~~~~~Kl~DFGla~~~~~~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~  213 (270)
T d1t4ha_         149 --------------GPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYS  213 (270)
T ss_dssp             --------------STTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             --------------CCCCCEEEeecCcceeccCCccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCC
Confidence                          234568888888887544332 34689999999999876 69999999999999999999999998


Q ss_pred             CCChHHHHH-HHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          325 THENLEHLA-MMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       325 ~~~~~~~~~-~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      +......+. .+..  +..|                                             ...+...++++++||
T Consensus       214 ~~~~~~~~~~~i~~--~~~~---------------------------------------------~~~~~~~~~~~~~li  246 (270)
T d1t4ha_         214 ECQNAAQIYRRVTS--GVKP---------------------------------------------ASFDKVAIPEVKEII  246 (270)
T ss_dssp             TCSSHHHHHHHHTT--TCCC---------------------------------------------GGGGGCCCHHHHHHH
T ss_pred             CcccHHHHHHHHHc--CCCC---------------------------------------------cccCccCCHHHHHHH
Confidence            765544322 1110  0000                                             011235677899999


Q ss_pred             HhccccCCCCCCCHHHHhcCCCCC
Q 013973          404 QGLLRYDPTDRLTAREALRHPFFT  427 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~hp~f~  427 (433)
                      .+||+.||++|||++|+|+||||+
T Consensus       247 ~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         247 EGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             HHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             HHHccCCHhHCcCHHHHhCCcccC
Confidence            999999999999999999999996

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-58  Score=443.58  Aligned_cols=260  Identities=23%  Similarity=0.401  Sum_probs=225.0

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      .+.++|++++.||+|+||+||+|.++.+++.||||+++........+.+|+++|+.+     .|+||++++++|++.+++
T Consensus         2 ~~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l-----~HpnIv~~~~~~~~~~~~   76 (321)
T d1tkia_           2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIA-----RHRNILHLHESFESMEEL   76 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHS-----CCTTBCCEEEEEEETTEE
T ss_pred             CCccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhC-----CCCCCCeEEEEEEECCEE
Confidence            356789999999999999999999999999999999987666666778999999988     679999999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      ||||||| ||+|.+++...+ ..+++.+++.|+.||+.||+|||++|||||||||+|||++.                  
T Consensus        77 ~lvmE~~~gg~L~~~i~~~~-~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~------------------  137 (321)
T d1tkia_          77 VMIFEFISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT------------------  137 (321)
T ss_dssp             EEEECCCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS------------------
T ss_pred             EEEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecC------------------
Confidence            9999999 889999997653 36999999999999999999999999999999999999954                  


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                             +....+||+|||++.......  ...+||+.|+|||.+.+..|+.++|||||||++|+|++|..||.+.+..+
T Consensus       138 -------~~~~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~  210 (321)
T d1tkia_         138 -------RRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ  210 (321)
T ss_dssp             -------SSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred             -------CCceEEEEcccchhhccccCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHH
Confidence                   234578999999887655433  33579999999999999999999999999999999999999999988877


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      .+..+......++..                                             .+..++.++++||.+||+.|
T Consensus       211 ~~~~i~~~~~~~~~~---------------------------------------------~~~~~s~~~~~li~~~L~~d  245 (321)
T d1tkia_         211 IIENIMNAEYTFDEE---------------------------------------------AFKEISIEAMDFVDRLLVKE  245 (321)
T ss_dssp             HHHHHHHTCCCCCHH---------------------------------------------HHTTSCHHHHHHHHTTSCSS
T ss_pred             HHHHHHhCCCCCChh---------------------------------------------hccCCCHHHHHHHHHHccCC
Confidence            776655433333322                                             12356788999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCC
Q 013973          411 PTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       411 P~~R~ta~ell~hp~f~~~  429 (433)
                      |++|||++|+|+||||++.
T Consensus       246 p~~R~s~~eil~hp~~~~~  264 (321)
T d1tkia_         246 RKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             GGGSCCHHHHHHSHHHHSC
T ss_pred             hhHCcCHHHHhcCHhhccC
Confidence            9999999999999999753

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.8e-58  Score=440.89  Aligned_cols=250  Identities=26%  Similarity=0.423  Sum_probs=216.5

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++++.||+|+||+||+|+++.+|+.||||++++..    ...+.+..|+.+++.+     .||||+++++++.+.+.
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~~~~~~~~~~~   78 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-----THPFIIRMWGTFQDAQQ   78 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-----CBTTBCCEEEEEECSSE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhc-----cCcChhheeeeEeeCCe
Confidence            56999999999999999999999999999999997432    2345677899998887     67999999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +|+||||+ ||+|..++....  .+++..++.++.||+.||+|||++|||||||||+|||+                   
T Consensus        79 ~~ivmE~~~gg~l~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl-------------------  137 (316)
T d1fota_          79 IFMIMDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL-------------------  137 (316)
T ss_dssp             EEEEECCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE-------------------
T ss_pred             eeeEeeecCCccccccccccc--cccccHHHHHHHHHHHhhhhhccCcEEccccCchheeE-------------------
Confidence            99999999 899999988765  78999999999999999999999999999999999999                   


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                              +.++.+||+|||+|..........+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+..+.
T Consensus       138 --------~~~g~vkL~DFG~a~~~~~~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~  209 (316)
T d1fota_         138 --------DKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT  209 (316)
T ss_dssp             --------CTTSCEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred             --------cCCCCEEEecCccceEeccccccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHH
Confidence                    455667888888877666666667999999999999999999999999999999999999999998777666


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      ...+...                       ...                          .+..+++++.++|.+||++||
T Consensus       210 ~~~i~~~-----------------------~~~--------------------------~p~~~s~~~~~li~~~L~~dp  240 (316)
T d1fota_         210 YEKILNA-----------------------ELR--------------------------FPPFFNEDVKDLLSRLITRDL  240 (316)
T ss_dssp             HHHHHHC-----------------------CCC--------------------------CCTTSCHHHHHHHHHHTCSCT
T ss_pred             HHHHHcC-----------------------CCC--------------------------CCCCCCHHHHHHHHHHhhhCH
Confidence            5543321                       111                          123567789999999999999


Q ss_pred             CCCC-----CHHHHhcCCCCCCC
Q 013973          412 TDRL-----TAREALRHPFFTRD  429 (433)
Q Consensus       412 ~~R~-----ta~ell~hp~f~~~  429 (433)
                      .+|+     |++|+|+||||++-
T Consensus       241 ~~R~~~~r~t~~~il~Hp~f~~i  263 (316)
T d1fota_         241 SQRLGNLQNGTEDVKNHPWFKEV  263 (316)
T ss_dssp             TTCTTSSTTTTHHHHTSGGGSSC
T ss_pred             HhccccchhhHHHHHcCcccccC
Confidence            9996     89999999999864

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-58  Score=431.77  Aligned_cols=250  Identities=22%  Similarity=0.370  Sum_probs=198.2

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec--CC
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY--RN  171 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~--~~  171 (433)
                      ++|++++.||+|+||+||+|+++.+|+.||+|+++..   ....+.+.+|+.+++++     +||||+++++++.+  .+
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~~~~~~~~~~~~   78 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-----KHPNIVRYYDRIIDRTNT   78 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSC-----CCTTBCCEEEEEEC----
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHC-----CCCCEeeEEEEEEeCCCC
Confidence            5799999999999999999999999999999998643   23345577888888777     78999999998854  56


Q ss_pred             eEEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCC-----ceeccCCCCceEeeccCccccCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKN--NYRSFPIDLVREIARQLLECIAFMHDLC-----MIHTDLKPENVLLVSSEYIKVPDY  243 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~-----ivHrDlKp~NILl~~~~~~~i~df  243 (433)
                      .+||||||+ ||+|.+++.+.  ....+++..++.++.||+.||+|||++|     ||||||||+|||++          
T Consensus        79 ~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~----------  148 (269)
T d2java1          79 TLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD----------  148 (269)
T ss_dssp             CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEEC----------
T ss_pred             EEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcC----------
Confidence            799999999 89999998642  2347999999999999999999999976     99999999999994          


Q ss_pred             cCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCC
Q 013973          244 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE  320 (433)
Q Consensus       244 g~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~  320 (433)
                                       .++.+||+|||++.......   ...+||+.|||||++.+..|+.++|||||||++|||++|+
T Consensus       149 -----------------~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~  211 (269)
T d2java1         149 -----------------GKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM  211 (269)
T ss_dssp             -----------------TTSCEEECCHHHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             -----------------CCCcEEEeeccceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCC
Confidence                             44567777777776543322   3458999999999999999999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHH
Q 013973          321 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  400 (433)
Q Consensus       321 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (433)
                      .||.+.+..+....+...                       .+.                         ..+..+++++.
T Consensus       212 ~Pf~~~~~~~~~~~i~~~-----------------------~~~-------------------------~~~~~~s~~l~  243 (269)
T d2java1         212 PPFTAFSQKELAGKIREG-----------------------KFR-------------------------RIPYRYSDELN  243 (269)
T ss_dssp             CSCCCSSHHHHHHHHHHT-----------------------CCC-------------------------CCCTTSCHHHH
T ss_pred             CCCCCCCHHHHHHHHHcC-----------------------CCC-------------------------CCCcccCHHHH
Confidence            999987766655443221                       000                         01235678999


Q ss_pred             HHHHhccccCCCCCCCHHHHhcCCCC
Q 013973          401 HLLQGLLRYDPTDRLTAREALRHPFF  426 (433)
Q Consensus       401 ~li~~~L~~dP~~R~ta~ell~hp~f  426 (433)
                      +||.+||+.||++|||++|+|+|||+
T Consensus       244 ~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         244 EIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             HHHHHHcCCChhHCcCHHHHHhCCcC
Confidence            99999999999999999999999996

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.1e-58  Score=443.74  Aligned_cols=250  Identities=26%  Similarity=0.421  Sum_probs=216.9

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++++.||+|+||.||+|+++.+|+.||||++....    ...+.+.+|+.+++.+     +||||+++++++.+...
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~~~~~~~~~~~  115 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSN  115 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-----CCTTBCCEEEEEECSSE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHc-----CCCcEeecccccccccc
Confidence            67999999999999999999999999999999986422    2335567899998887     78999999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +++||||+ ||+|.+++...+  .+++..++.|+.||+.||.|||++|||||||||+|||+                   
T Consensus       116 ~~~v~e~~~~g~l~~~l~~~~--~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl-------------------  174 (350)
T d1rdqe_         116 LYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-------------------  174 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE-------------------
T ss_pred             cccccccccccchhhhHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHccc-------------------
Confidence            99999999 999999998765  79999999999999999999999999999999999999                   


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEH  331 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~~  331 (433)
                              +.++.+||+|||+++.........+||+.|||||++.+..|+.++|||||||++|||++|..||.+.+....
T Consensus       175 --------~~~g~ikL~DFG~a~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~  246 (350)
T d1rdqe_         175 --------DQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI  246 (350)
T ss_dssp             --------CTTSCEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             --------CCCCCEEeeeceeeeecccccccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHH
Confidence                    445567888888887666555667899999999999999999999999999999999999999998777665


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      +..+......                                                 .+..+++++.+||.+||++||
T Consensus       247 ~~~i~~~~~~-------------------------------------------------~p~~~s~~~~~li~~~L~~dP  277 (350)
T d1rdqe_         247 YEKIVSGKVR-------------------------------------------------FPSHFSSDLKDLLRNLLQVDL  277 (350)
T ss_dssp             HHHHHHCCCC-------------------------------------------------CCTTCCHHHHHHHHHHSCSCT
T ss_pred             HHHHhcCCCC-------------------------------------------------CCccCCHHHHHHHHHHhhhCH
Confidence            5544321111                                                 123567899999999999999


Q ss_pred             CCCC-----CHHHHhcCCCCCCC
Q 013973          412 TDRL-----TAREALRHPFFTRD  429 (433)
Q Consensus       412 ~~R~-----ta~ell~hp~f~~~  429 (433)
                      .+|+     |++|+++||||++.
T Consensus       278 ~kR~~~~r~t~~ell~Hp~f~~~  300 (350)
T d1rdqe_         278 TKRFGNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             TTCTTSSTTTTHHHHTSGGGTTC
T ss_pred             HhccccccccHHHHHcCccccCC
Confidence            9995     89999999999864

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.5e-58  Score=437.35  Aligned_cols=251  Identities=26%  Similarity=0.368  Sum_probs=206.7

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ..|++++.||+|+||+||+|+++.+++.||||+++...    ...+.+.+|+.+++++     .||||+++++++.+.+.
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l-----~HpnIv~~~~~~~~~~~   89 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-----RHPNTIQYRGCYLREHT   89 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEEEETTE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHC-----CCCCEeeEEEEEEECCE
Confidence            45999999999999999999999999999999986432    2335577899999888     67999999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +||||||| +|+|..++....  .+++..++.++.||+.||.|||++|||||||||+|||++.++               
T Consensus        90 ~~iv~E~~~~g~l~~~~~~~~--~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~---------------  152 (309)
T d1u5ra_          90 AWLVMEYCLGSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG---------------  152 (309)
T ss_dssp             EEEEEECCSEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT---------------
T ss_pred             EEEEEEecCCCchHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCC---------------
Confidence            99999999 777766665543  799999999999999999999999999999999999996544               


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhC---CCCCCcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILG---LGWTYPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                                  .+||+|||++...... ...+||+.|||||++.+   ..|+.++|||||||++|||++|..||.+.+.
T Consensus       153 ------------~~Kl~DFG~a~~~~~~-~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~  219 (309)
T d1u5ra_         153 ------------LVKLGDFGSASIMAPA-NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA  219 (309)
T ss_dssp             ------------EEEECCCTTCBSSSSB-CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred             ------------CEEEeecccccccCCC-CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCH
Confidence                        4566666666543322 33579999999999974   4589999999999999999999999988776


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      .+.+..+.....+.+                                               ....+++++.+||.+||+
T Consensus       220 ~~~~~~i~~~~~~~~-----------------------------------------------~~~~~s~~~~~li~~~L~  252 (309)
T d1u5ra_         220 MSALYHIAQNESPAL-----------------------------------------------QSGHWSEYFRNFVDSCLQ  252 (309)
T ss_dssp             HHHHHHHHHSCCCCC-----------------------------------------------SCTTSCHHHHHHHHHHTC
T ss_pred             HHHHHHHHhCCCCCC-----------------------------------------------CCCCCCHHHHHHHHHHCc
Confidence            665544332110000                                               012467789999999999


Q ss_pred             cCCCCCCCHHHHhcCCCCCCC
Q 013973          409 YDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       409 ~dP~~R~ta~ell~hp~f~~~  429 (433)
                      .||++|||++|+|+||||++.
T Consensus       253 ~dP~~Rpt~~ell~Hp~~~~~  273 (309)
T d1u5ra_         253 KIPQDRPTSEVLLKHRFVLRE  273 (309)
T ss_dssp             SSGGGSCCHHHHTTCHHHHSC
T ss_pred             CChhHCcCHHHHHhCHHhcCC
Confidence            999999999999999999764

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-57  Score=431.97  Aligned_cols=282  Identities=32%  Similarity=0.516  Sum_probs=226.3

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch---hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK---KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      ++|++++.||+|+||+||+|+++.+|+.||||+++...   ...+.+.+|+.+++++     +||||+++++++.+.+++
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-----~Hp~Iv~~~~~~~~~~~~   76 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-----NHPNIVKLLDVIHTENKL   76 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTC-----CCTTBCCEEEEEEETTEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhC-----CCCcEEEeccccccccce
Confidence            57999999999999999999999999999999996432   2345678899999888     789999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       174 ~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      |+||||+++++.+++.......+++..++.++.||+.||+|||++|||||||||+|||++                    
T Consensus        77 ~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~--------------------  136 (298)
T d1gz8a_          77 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN--------------------  136 (298)
T ss_dssp             EEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC--------------------
T ss_pred             eEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeec--------------------
Confidence            999999988888888766667899999999999999999999999999999999999994                    


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCC-CCCcchhHHHHHHHHHHHhCCCCCCCCChH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQTHENL  329 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~Pf~~~~~~  329 (433)
                             .++.+||+|||.+.......   ...+||+.|+|||++.... ++.++|+|||||++|+|++|+.||.+.+..
T Consensus       137 -------~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~  209 (298)
T d1gz8a_         137 -------TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI  209 (298)
T ss_dssp             -------TTSCEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             -------ccCcceeccCCcceeccCCcccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHH
Confidence                   45567777788776543322   3358999999999988766 578999999999999999999999999988


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +.+..+....+..++..+..+......     ....+...               ..........++.++.+||.+||++
T Consensus       210 ~~~~~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~---------------~~~~~~~~~~~s~~~~dll~~mL~~  269 (298)
T d1gz8a_         210 DQLFRIFRTLGTPDEVVWPGVTSMPDY-----KPSFPKWA---------------RQDFSKVVPPLDEDGRSLLSQMLHY  269 (298)
T ss_dssp             HHHHHHHHHHCCCCTTTSTTGGGSTTC-----CTTSCCCC---------------CCCHHHHSTTCCHHHHHHHHHHTCS
T ss_pred             HHHHHHHHhcCCCchhhcccccccccc-----cccccccc---------------ccchhhhccCCCHHHHHHHHHHccC
Confidence            888888888887665433322111100     00011000               0011223346788999999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCCCC
Q 013973          410 DPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       410 dP~~R~ta~ell~hp~f~~~~  430 (433)
                      ||++|||+.|+|+||||++..
T Consensus       270 dP~~R~t~~ell~H~ff~~~~  290 (298)
T d1gz8a_         270 DPNKRISAKAALAHPFFQDVT  290 (298)
T ss_dssp             STTTSCCHHHHHTSGGGTTCC
T ss_pred             ChhHCcCHHHHhCCHhhccCC
Confidence            999999999999999998653

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=2.7e-57  Score=424.80  Aligned_cols=255  Identities=29%  Similarity=0.517  Sum_probs=212.3

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc----------hhhHHHHHHHHHHHHHHHhcCCCCCceEEecc
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----------KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN  165 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----------~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~  165 (433)
                      .++|++.+.||+|+||+||+|+++.+++.||||+++..          +...+.+.+|+.+++++.    .|+||+++++
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~----~hpnIv~~~~   77 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS----GHPNIIQLKD   77 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHT----TCTTBCCEEE
T ss_pred             cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhc----CCCCeEEEEe
Confidence            46899999999999999999999999999999998642          123345778999999993    2688999999


Q ss_pred             eeecCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCc
Q 013973          166 WFDYRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  244 (433)
Q Consensus       166 ~~~~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg  244 (433)
                      ++.+++++||||||+ ||+|.++|...+  .+++..++.++.||+.||+|||++|||||||||+|||++           
T Consensus        78 ~~~~~~~~~ivmE~~~~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~-----------  144 (277)
T d1phka_          78 TYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD-----------  144 (277)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-----------
T ss_pred             ecccCcceEEEEEcCCCchHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEc-----------
Confidence            999999999999999 899999998765  799999999999999999999999999999999999994           


Q ss_pred             CCCCCCCCCcccccCCCCCCEEEEecCCccccCCC--CCceeecCcccchhhhhC------CCCCCcchhHHHHHHHHHH
Q 013973          245 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILG------LGWTYPCDIWSVGCILVEL  316 (433)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~------~~~~~~~DvwSlGv~l~el  316 (433)
                                      .++.+||+|||++......  ....+||+.|+|||++.+      ..++.++||||+||++|||
T Consensus       145 ----------------~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyem  208 (277)
T d1phka_         145 ----------------DDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTL  208 (277)
T ss_dssp             ----------------TTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHH
T ss_pred             ----------------CCCCeEEccchheeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhh
Confidence                            4556777777777654432  233579999999999963      3478899999999999999


Q ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCch
Q 013973          317 CTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSA  396 (433)
Q Consensus       317 ltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (433)
                      ++|+.||.+.+..+....+...-                       ..++.                      .....+|
T Consensus       209 l~g~~Pf~~~~~~~~~~~i~~~~-----------------------~~~~~----------------------~~~~~~s  243 (277)
T d1phka_         209 LAGSPPFWHRKQMLMLRMIMSGN-----------------------YQFGS----------------------PEWDDYS  243 (277)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHTC-----------------------CCCCT----------------------TTGGGSC
T ss_pred             ccCCCCCCCCCHHHHHHHHHhCC-----------------------CCCCC----------------------cccccCC
Confidence            99999999887766555443211                       11111                      0123567


Q ss_pred             hHHHHHHHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          397 GDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       397 ~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      +++++||.+||+.||++|||++|||+||||++
T Consensus       244 ~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~  275 (277)
T d1phka_         244 DTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ  275 (277)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCT
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHHcCHHHHH
Confidence            89999999999999999999999999999974

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-58  Score=435.78  Aligned_cols=276  Identities=26%  Similarity=0.462  Sum_probs=214.2

Q ss_pred             EEeeeeccccEEEEEEEECCCCeEEEEEEeecchh------hHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973          101 IHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKK------YREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus       101 ~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~------~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      .+++||+|+||+||+|+++.+|+.||||+++....      ....+.+|+.+++++     +|+||+++++++.+++++|
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l-----~hpnIv~~~~~~~~~~~~~   76 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-----SHPNIIGLLDAFGHKSNIS   76 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHC-----CCTTBCCEEEEECCTTCCE
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhC-----CCCCEeEEEeeeccCCcee
Confidence            46899999999999999999999999999864321      123567899999998     6799999999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          175 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       175 lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      |||||+.+++...+... ...+++..++.++.||+.||+|||++|||||||||+|||++.                    
T Consensus        77 ivmE~~~~~~~~~~~~~-~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~--------------------  135 (299)
T d1ua2a_          77 LVFDFMETDLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDE--------------------  135 (299)
T ss_dssp             EEEECCSEEHHHHHTTC-CSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT--------------------
T ss_pred             ehhhhhcchHHhhhhhc-ccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecC--------------------
Confidence            99999955555544433 247999999999999999999999999999999999999954                    


Q ss_pred             ccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCChHH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENLE  330 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~~  330 (433)
                             ++.+||+|||++.......   ...+||+.|+|||++.+. .|+.++|||||||++|||++|.+||.+.++.+
T Consensus       136 -------~~~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~  208 (299)
T d1ua2a_         136 -------NGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD  208 (299)
T ss_dssp             -------TCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             -------CCccccccCccccccCCCcccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHH
Confidence                   4566677777665443322   335799999999999754 58999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ++..+.+.+|..+.+.+.............   ..+.                  ..........++++.+||.+||+.|
T Consensus       209 ~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~------------------~~~~~~~~~~s~~~~dll~~~L~~d  267 (299)
T d1ua2a_         209 QLTRIFETLGTPTEEQWPDMCSLPDYVTFK---SFPG------------------IPLHHIFSAAGDDLLDLIQGLFLFN  267 (299)
T ss_dssp             HHHHHHHHHCCCCTTTSSSTTSSTTCCCCC---CCCC------------------CCHHHHCTTCCHHHHHHHHHHHCSS
T ss_pred             HHHHHHHhcCCCChhhccchhccchhhhhc---cCCC------------------CChHHhcccCCHHHHHHHHHHccCC
Confidence            999999988877654322111000000000   0000                  0011223466789999999999999


Q ss_pred             CCCCCCHHHHhcCCCCCCCC
Q 013973          411 PTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       411 P~~R~ta~ell~hp~f~~~~  430 (433)
                      |++||||+|+|+||||++.+
T Consensus       268 P~~R~sa~e~L~Hp~f~~~p  287 (299)
T d1ua2a_         268 PCARITATQALKMKYFSNRP  287 (299)
T ss_dssp             TTTSCCHHHHHTSGGGTSSS
T ss_pred             hhhCcCHHHHhCCHhhCCCC
Confidence            99999999999999999765

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.8e-57  Score=428.29  Aligned_cols=284  Identities=28%  Similarity=0.476  Sum_probs=220.7

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCC-CeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee---
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD---  168 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~-~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~---  168 (433)
                      .++|+++++||+|+||+||+|++..+ ++.||||+++..   ........+|+.+++.+...  +||||++++++|.   
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~--~HpnIv~~~~~~~~~~   83 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF--EHPNVVRLFDVCTVSR   83 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHT--CCTTBCCEEEEEEEEE
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhc--CCCCcceeeeeecccc
Confidence            36799999999999999999999755 678999998632   22233466788888888542  5789999999884   


Q ss_pred             --cCCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCC
Q 013973          169 --YRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  246 (433)
Q Consensus       169 --~~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~  246 (433)
                        ....++++|||+.+++..++.......+++..++.++.||+.||+|||++|||||||||+|||++.+           
T Consensus        84 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~-----------  152 (305)
T d1blxa_          84 TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSS-----------  152 (305)
T ss_dssp             CSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT-----------
T ss_pred             cccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCC-----------
Confidence              3468999999996666665555555689999999999999999999999999999999999999554           


Q ss_pred             CCCCCCCcccccCCCCCCEEEEecCCccccCCC--CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 013973          247 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                                      +.+||+|||++......  ....+||+.|+|||++.+..|+.++|||||||++|||++|++||.
T Consensus       153 ----------------~~~kl~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~  216 (305)
T d1blxa_         153 ----------------GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFR  216 (305)
T ss_dssp             ----------------CCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             ----------------CCeeecchhhhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCC
Confidence                            45666666655433222  234589999999999999999999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHH
Q 013973          325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  404 (433)
Q Consensus       325 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  404 (433)
                      +.+..+.+..+...++..+...+.............                      .........+...++++.+||.
T Consensus       217 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~s~~~~dli~  274 (305)
T d1blxa_         217 GSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHS----------------------KSAQPIEKFVTDIDELGKDLLL  274 (305)
T ss_dssp             CSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCC----------------------CCCCCGGGTCCSCCHHHHHHHH
T ss_pred             CCCHHHHHHHHHHhhCCCchhcccccccchhhhhcc----------------------ccccchhhccccCCHHHHHHHH
Confidence            999999999998888876654322111000000000                      0001112344567889999999


Q ss_pred             hccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          405 GLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       405 ~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      +||++||++||||+|+|+||||++.+
T Consensus       275 ~mL~~dP~~R~sa~e~L~Hpff~~i~  300 (305)
T d1blxa_         275 KCLTFNPAKRISAYSALSHPYFQDLE  300 (305)
T ss_dssp             HHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             HHCcCChhHCcCHHHHhcChhhcCch
Confidence            99999999999999999999998754

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=6.3e-57  Score=438.35  Aligned_cols=256  Identities=25%  Similarity=0.402  Sum_probs=206.0

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch----hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK----KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++++.||+|+||.||+|+++.+|+.||||++.+..    ........|...++.+.+  .+||||+++++++.+.+.
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~--~~hpnIv~l~~~~~~~~~   81 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST--GDCPFIVCMSYAFHTPDK   81 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSS--SCCTTBCCEEEEEECSSE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhc--CCCCcEEEEEEEEEECCE
Confidence            57999999999999999999999999999999986422    122334455555555533  267999999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +||||||+ ||+|.++|....  .+++..++.|+.||+.||+|||++|||||||||+|||++                  
T Consensus        82 ~~ivmE~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~------------------  141 (364)
T d1omwa3          82 LSFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD------------------  141 (364)
T ss_dssp             EEEEECCCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC------------------
T ss_pred             EEEEEEecCCCcHHHHHHhcc--cccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEc------------------
Confidence            99999999 899999998765  799999999999999999999999999999999999995                  


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCC-CCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCChH
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPD-QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTHENL  329 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~  329 (433)
                               .++.+||+|||+|+..... ....+||+.|||||++.. ..|+.++|||||||++|||++|+.||.+.+..
T Consensus       142 ---------~~g~iKl~DFGla~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~  212 (364)
T d1omwa3         142 ---------EHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK  212 (364)
T ss_dssp             ---------SSSCEEECCCTTCEECSSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSS
T ss_pred             ---------CCCcEEEeeeceeeecCCCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHH
Confidence                     4456777777777644333 344689999999999974 56999999999999999999999999875433


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +........                    .....                          ..++.+++++++||.+||++
T Consensus       213 ~~~~~~~~~--------------------~~~~~--------------------------~~~~~~s~~~~~li~~~L~~  246 (364)
T d1omwa3         213 DKHEIDRMT--------------------LTMAV--------------------------ELPDSFSPELRSLLEGLLQR  246 (364)
T ss_dssp             CHHHHHHHS--------------------SSCCC--------------------------CCCSSSCHHHHHHHHHHTCS
T ss_pred             HHHHHHHhc--------------------ccCCC--------------------------CCCCCCCHHHHHHHHHHccc
Confidence            222111110                    01111                          12346788999999999999


Q ss_pred             CCCCCCC-----HHHHhcCCCCCCC
Q 013973          410 DPTDRLT-----AREALRHPFFTRD  429 (433)
Q Consensus       410 dP~~R~t-----a~ell~hp~f~~~  429 (433)
                      ||++|||     |+|+++||||++-
T Consensus       247 dP~~R~t~~~~~a~eil~Hp~f~~i  271 (364)
T d1omwa3         247 DVNRRLGCLGRGAQEVKESPFFRSL  271 (364)
T ss_dssp             STTTSTTTSSSTHHHHHTSGGGTTC
T ss_pred             CHHHhCCCcccCHHHHHcCccccCC
Confidence            9999999     8999999999864

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-56  Score=433.10  Aligned_cols=292  Identities=27%  Similarity=0.490  Sum_probs=231.7

Q ss_pred             CCceeecCce---ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCC
Q 013973           85 GHYMFALGEN---LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGN  158 (433)
Q Consensus        85 ~~~~~~~~~~---~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~  158 (433)
                      |.+...+++.   +.++|+++++||+|+||+||+|.++.+|+.||||+++..   ....+.+.+|+.+|+.+     .|+
T Consensus         3 ~~~~~~~~~~~~~~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-----~hp   77 (346)
T d1cm8a_           3 GFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-----RHE   77 (346)
T ss_dssp             SBCCEECSSSEECCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-----CBT
T ss_pred             CcEEEeccCceeecCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhc-----CCC
Confidence            4444455543   678999999999999999999999999999999999742   33456678899999998     678


Q ss_pred             ceEEecceeecCC------eEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEe
Q 013973          159 RCVQIRNWFDYRN------HICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLL  232 (433)
Q Consensus       159 ~i~~~~~~~~~~~------~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl  232 (433)
                      ||++++++|...+      ++|+||||++.+|..++...   .+++..++.++.||+.||+|||++|||||||||+|||+
T Consensus        78 niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~  154 (346)
T d1cm8a_          78 NVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV  154 (346)
T ss_dssp             TBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred             CeeEEEEEeccCccccccceEEEEEecccccHHHHHHhc---cccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhc
Confidence            9999999987654      67999999988888887653   69999999999999999999999999999999999999


Q ss_pred             eccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCC-CCCCcchhHHHHH
Q 013973          233 VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGC  311 (433)
Q Consensus       233 ~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv  311 (433)
                                                 +.++.+||+|||++..........+||+.|+|||++.+. .++.++|||||||
T Consensus       155 ---------------------------~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGv  207 (346)
T d1cm8a_         155 ---------------------------NEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGC  207 (346)
T ss_dssp             ---------------------------CTTCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHH
T ss_pred             ---------------------------ccccccccccccceeccCCccccccccccccCHHHHcCCCCCCccchhhcchH
Confidence                                       455667888888887666666667899999999999874 5689999999999


Q ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhh
Q 013973          312 ILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH  391 (433)
Q Consensus       312 ~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (433)
                      ++|+|++|++||.+.+..+.+..+....+..|.+++.............+......                  ......
T Consensus       208 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~  269 (346)
T d1cm8a_         208 IMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEK------------------KDFASI  269 (346)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCC------------------CCGGGT
T ss_pred             HHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccc------------------cchHHh
Confidence            99999999999999999999999999999999887765433322211111110000                  001112


Q ss_pred             cCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          392 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       392 ~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      ....++++.+||.+||+.||++||||+|+|+||||++.
T Consensus       270 ~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~  307 (346)
T d1cm8a_         270 LTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL  307 (346)
T ss_dssp             CTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             ccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcC
Confidence            34567899999999999999999999999999999863

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-57  Score=431.58  Aligned_cols=251  Identities=25%  Similarity=0.388  Sum_probs=209.0

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++++.||+|+||+||+|+++.+++.||||++++.    ....+....|..++.+.    .+||||+++++++.+.+.
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~----~~hp~Iv~~~~~~~~~~~   77 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA----WEHPFLTHMFCTFQTKEN   77 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHH----TTCTTBCCEEEEEECSSE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHh----CCCCcEEEEEEEEccCCc
Confidence            5699999999999999999999999999999999743    22234456666665532    277999999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      +||||||+ +|+|.+++....  .+++.+++.++.||+.||+|||++|||||||||+|||+++                 
T Consensus        78 ~yivmEy~~~g~L~~~i~~~~--~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~-----------------  138 (320)
T d1xjda_          78 LFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDK-----------------  138 (320)
T ss_dssp             EEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT-----------------
T ss_pred             eeEEEeecCCCcHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecC-----------------
Confidence            99999999 899999998765  7999999999999999999999999999999999999954                 


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCh
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN  328 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~  328 (433)
                                ++.+||+|||++......   ....+||+.|+|||++.+..|+.++|||||||++|||++|+.||.+.+.
T Consensus       139 ----------~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~  208 (320)
T d1xjda_         139 ----------DGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE  208 (320)
T ss_dssp             ----------TSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             ----------CCceeccccchhhhcccccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCH
Confidence                      455666666666533222   2335799999999999999999999999999999999999999998877


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLR  408 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  408 (433)
                      .+....+...                       ...                          .+..+++++++||.+||+
T Consensus       209 ~~~~~~i~~~-----------------------~~~--------------------------~p~~~s~~~~dli~~~L~  239 (320)
T d1xjda_         209 EELFHSIRMD-----------------------NPF--------------------------YPRWLEKEAKDLLVKLFV  239 (320)
T ss_dssp             HHHHHHHHHC-----------------------CCC--------------------------CCTTSCHHHHHHHHHHSC
T ss_pred             HHHHHHHHcC-----------------------CCC--------------------------CCccCCHHHHHHHHHhcc
Confidence            6665544221                       111                          123567899999999999


Q ss_pred             cCCCCCCCHH-HHhcCCCCCCC
Q 013973          409 YDPTDRLTAR-EALRHPFFTRD  429 (433)
Q Consensus       409 ~dP~~R~ta~-ell~hp~f~~~  429 (433)
                      +||++|||+. |+++||||++-
T Consensus       240 ~dP~~R~s~~~~l~~hpff~~~  261 (320)
T d1xjda_         240 REPEKRLGVRGDIRQHPLFREI  261 (320)
T ss_dssp             SSGGGSBTTBSCGGGSGGGTTC
T ss_pred             cCCCCCcCHHHHHHhCchhccC
Confidence            9999999995 89999999864

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-57  Score=437.91  Aligned_cols=262  Identities=27%  Similarity=0.484  Sum_probs=210.6

Q ss_pred             ecCcEEEEe-eeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec----
Q 013973           95 LTSRYKIHS-KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY----  169 (433)
Q Consensus        95 ~~~~~~~~~-~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~----  169 (433)
                      +.++|+++. .||+|+||+||+|+++.+++.||||+++..    ....+|+.++.++.    +||||++++++|++    
T Consensus         9 i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~----~~~~~E~~~~~~~~----~hpnIv~l~~~~~~~~~~   80 (335)
T d2ozaa1           9 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRAS----QCPHIVRIVDVYENLYAG   80 (335)
T ss_dssp             GGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHT----TSTTBCCEEEEEEEEETT
T ss_pred             cccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc----HHHHHHHHHHHHhc----CCCCCCeEEEEEeecccC
Confidence            456899885 599999999999999999999999999753    34566888876652    57899999999875    


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      ..++||||||| ||+|.++|...+...|++.+++.|+.||+.||+|||++|||||||||+|||++..             
T Consensus        81 ~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~-------------  147 (335)
T d2ozaa1          81 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK-------------  147 (335)
T ss_dssp             EEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCS-------------
T ss_pred             CCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccc-------------
Confidence            57899999999 8999999987766689999999999999999999999999999999999999642             


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                                 +..+.+||+|||+++......  ...+||+.|||||++.+..|+.++|||||||++|+|+||++||.+.
T Consensus       148 -----------~~~~~~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~  216 (335)
T d2ozaa1         148 -----------RPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN  216 (335)
T ss_dssp             -----------STTCCEEECCCTTCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEET
T ss_pred             -----------cccccccccccceeeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCC
Confidence                       234678999999887554333  4468999999999999999999999999999999999999999875


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      +..+....+.                   ..+..+...+|..                      .+..+++++.+||.+|
T Consensus       217 ~~~~~~~~~~-------------------~~i~~~~~~~~~~----------------------~~~~~s~~~~~li~~~  255 (335)
T d2ozaa1         217 HGLAISPGMK-------------------TRIRMGQYEFPNP----------------------EWSEVSEEVKMLIRNL  255 (335)
T ss_dssp             TCC---------------------------CCCSCSSSCCTT----------------------HHHHSCHHHHHHHHHH
T ss_pred             CHHHHHHHHH-------------------HHHhcCCCCCCCc----------------------ccccCCHHHHHHHHHH
Confidence            5433222111                   1122222222220                      1124677899999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      |++||++|||+.|+|+||||++.
T Consensus       256 L~~dP~~R~s~~eil~hp~~~~~  278 (335)
T d2ozaa1         256 LKTEPTQRMTITEFMNHPWIMQS  278 (335)
T ss_dssp             SCSSTTTSCCHHHHHHSHHHHTT
T ss_pred             ccCChhHCcCHHHHHcCHHhhCC
Confidence            99999999999999999999754

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.1e-57  Score=421.43  Aligned_cols=249  Identities=26%  Similarity=0.459  Sum_probs=205.3

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-------hhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-------KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-------~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      .++|++.+.||+|+||+||+|+++.+|+.||||+++...       .....+..|+.+++++.+   .|+||+++++++.
T Consensus         3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~---~h~nIv~~~~~~~   79 (273)
T d1xwsa_           3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS---GFSGVIRLLDWFE   79 (273)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCS---SSCSBCCEEEEEE
T ss_pred             CCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhcc---CCCCccEEEEEEe
Confidence            468999999999999999999999999999999986422       112335679999999843   4789999999999


Q ss_pred             cCCeEEEEEecC-C-CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCC
Q 013973          169 YRNHICIVFEKL-G-SSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSS  246 (433)
Q Consensus       169 ~~~~~~lV~e~~-~-~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~  246 (433)
                      +.+.+|+||||+ + +++.+++....  .+++.+++.++.||+.||+|||++|||||||||+|||++.            
T Consensus        80 ~~~~~~lv~e~~~~~~~l~~~~~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~------------  145 (273)
T d1xwsa_          80 RPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL------------  145 (273)
T ss_dssp             CSSEEEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET------------
T ss_pred             eCCeEEEEEEeccCcchHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEec------------
Confidence            999999999998 4 58888887764  7999999999999999999999999999999999999963            


Q ss_pred             CCCCCCCcccccCCCCCCEEEEecCCccccCCCC-CceeecCcccchhhhhCCCC-CCcchhHHHHHHHHHHHhCCCCCC
Q 013973          247 LHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-NYIVSTRHYRAPEVILGLGW-TYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                                    ..+.+||+|||++....... ...+||+.|+|||++.+..+ +.++|||||||++|||++|+.||.
T Consensus       146 --------------~~~~vkl~DFG~a~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~  211 (273)
T d1xwsa_         146 --------------NRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE  211 (273)
T ss_dssp             --------------TTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             --------------CCCeEEECccccceecccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCC
Confidence                          23467777777776543332 44689999999999988765 577999999999999999999997


Q ss_pred             CCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHH
Q 013973          325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  404 (433)
Q Consensus       325 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  404 (433)
                      ..+.  .                           ..+...                          .+..+|+++++||.
T Consensus       212 ~~~~--i---------------------------~~~~~~--------------------------~~~~~s~~~~~li~  236 (273)
T d1xwsa_         212 HDEE--I---------------------------IRGQVF--------------------------FRQRVSSECQHLIR  236 (273)
T ss_dssp             SHHH--H---------------------------HHCCCC--------------------------CSSCCCHHHHHHHH
T ss_pred             CchH--H---------------------------hhcccC--------------------------CCCCCCHHHHHHHH
Confidence            5211  0                           011111                          12356789999999


Q ss_pred             hccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          405 GLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       405 ~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      +||+.||++|||++|+|+||||++..
T Consensus       237 ~~L~~dp~~R~s~~eil~hp~~~~~~  262 (273)
T d1xwsa_         237 WCLALRPSDRPTFEEIQNHPWMQDVL  262 (273)
T ss_dssp             HHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred             HHccCCHhHCcCHHHHhcCHhhCCCC
Confidence            99999999999999999999998753

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.3e-55  Score=416.40  Aligned_cols=278  Identities=28%  Similarity=0.439  Sum_probs=218.8

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      ++|+++++||+|+||+||+|+++ +|+.||||+++..   ....+.+.+|+.+++++     +|+||+++++++...+..
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~~~~~~~~~~~~   75 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKEL-----KHSNIVKLYDVIHTKKRL   75 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGC-----CCTTBCCEEEEEECSSCE
T ss_pred             CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhC-----CCCcEEeeeeecccCCce
Confidence            57999999999999999999986 7789999999643   22346778899999888     679999999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          174 CIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       174 ~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      |+|||++++++...+.... ..+++..++.++.||+.||+|||++|||||||||+|||++                    
T Consensus        76 ~i~~e~~~~~~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~--------------------  134 (286)
T d1ob3a_          76 VLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN--------------------  134 (286)
T ss_dssp             EEEEECCSEEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC--------------------
T ss_pred             eEEEEeehhhhHHHHHhhc-CCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEc--------------------
Confidence            9999999666665555433 4799999999999999999999999999999999999994                    


Q ss_pred             cccccCCCCCCEEEEecCCccccCCC---CCceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCChH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPD---QNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTHENL  329 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~~~~~~  329 (433)
                             .++.+||+|||.+......   .....||+.|+|||.+.+. .++.++|||||||++|||++|+.||.+.+..
T Consensus       135 -------~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~  207 (286)
T d1ob3a_         135 -------REGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA  207 (286)
T ss_dssp             -------TTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             -------CCCCEEecccccceecccCccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHH
Confidence                   4556777777777654332   2334789999999999865 4689999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +++..+....+..+...+.............     ...  .             ...........++++.|||.+||++
T Consensus       208 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--~-------------~~~~~~~~~~~s~~~~dli~~~L~~  267 (286)
T d1ob3a_         208 DQLMRIFRILGTPNSKNWPNVTELPKYDPNF-----TVY--E-------------PLPWESFLKGLDESGIDLLSKMLKL  267 (286)
T ss_dssp             HHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC-----CCC--C-------------CCCGGGTCCSCCHHHHHHHHHHTCS
T ss_pred             HHHHHHHHhhCCCChhhccchhhhhhccccc-----ccc--c-------------CcchhhhcccCCHHHHHHHHHHccC
Confidence            9888888888887655433322211110000     000  0             0001223456788999999999999


Q ss_pred             CCCCCCCHHHHhcCCCCCC
Q 013973          410 DPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       410 dP~~R~ta~ell~hp~f~~  428 (433)
                      ||++||||.|+|+||||++
T Consensus       268 dP~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         268 DPNQRITAKQALEHAYFKE  286 (286)
T ss_dssp             STTTSCCHHHHHTSGGGGC
T ss_pred             ChhHCcCHHHHhcCcccCc
Confidence            9999999999999999975

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-54  Score=421.52  Aligned_cols=300  Identities=26%  Similarity=0.430  Sum_probs=227.9

Q ss_pred             CceeecCce---ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCc
Q 013973           86 HYMFALGEN---LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNR  159 (433)
Q Consensus        86 ~~~~~~~~~---~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~  159 (433)
                      .|++..++.   +.++|+++++||+|+||+||+|+++.+|+.||||+++..   ......+.+|+.+++++     +|+|
T Consensus         3 ~~~~~~~~~~f~i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l-----~hpn   77 (355)
T d2b1pa1           3 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-----NHKN   77 (355)
T ss_dssp             EEEEEETTEEEEEETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHC-----CCTT
T ss_pred             CEEEEeCCcceeecCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhc-----CCCC
Confidence            467778884   458999999999999999999999999999999999743   33445677899999888     6789


Q ss_pred             eEEecceee------cCCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEee
Q 013973          160 CVQIRNWFD------YRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLV  233 (433)
Q Consensus       160 i~~~~~~~~------~~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~  233 (433)
                      |++++++|.      ...++|+||||+.+++.+.+.    ..+++..++.++.||+.||+|||++||+||||||+|||++
T Consensus        78 Iv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~----~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~  153 (355)
T d2b1pa1          78 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK  153 (355)
T ss_dssp             BCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC
T ss_pred             eeEEEEEEecccccccCceeEEEEeccchHHHHhhh----cCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccc
Confidence            999999985      347899999999777777664    3699999999999999999999999999999999999995


Q ss_pred             ccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC--CCceeecCcccchhhhhCCCCCCcchhHHHHH
Q 013973          234 SSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGC  311 (433)
Q Consensus       234 ~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv  311 (433)
                      .+                           +.+|++|||.++.....  ....+||+.|+|||++.+..++.++||||+||
T Consensus       154 ~~---------------------------~~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~  206 (355)
T d2b1pa1         154 SD---------------------------CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC  206 (355)
T ss_dssp             TT---------------------------CCEEECCCCC---------------CCTTCCHHHHTTCCCCTTHHHHHHHH
T ss_pred             cc---------------------------cceeeechhhhhccccccccccccccccccChhhhcCCCCCCCcccccccc
Confidence            54                           45566666655433322  23457999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhh
Q 013973          312 ILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH  391 (433)
Q Consensus       312 ~l~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (433)
                      ++|+|++|++||.+.+.......+....+..+.+.+.........+........   ..........    .........
T Consensus       207 ~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~----~~~~~~~~~  279 (355)
T d2b1pa1         207 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYA---GLTFPKLFPD----SLFPADSEH  279 (355)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCC---CCCHHHHSCG----GGSCCSSHH
T ss_pred             hHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCcccc---cccccccccc----ccccccccc
Confidence            999999999999999999999999999988888887776666555544322110   0000000000    000000111


Q ss_pred             cCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCC
Q 013973          392 VDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       392 ~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      ....++++.+||++||+.||++||||+|||+||||+.
T Consensus       280 ~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~  316 (355)
T d2b1pa1         280 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV  316 (355)
T ss_dssp             HHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             cccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence            2235778999999999999999999999999999975

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.5e-55  Score=422.19  Aligned_cols=277  Identities=28%  Similarity=0.504  Sum_probs=220.2

Q ss_pred             cEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec------CC
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY------RN  171 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~------~~  171 (433)
                      +|+.+++||+|+||+||+|+++.+|+.||||+++....   ...+|+.+++++     +|+||++++++|..      ..
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~---~~~~Ei~il~~l-----~h~niv~~~~~~~~~~~~~~~~   92 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---FKNRELQIMRKL-----DHCNIVRLRYFFYSSGEKKDEV   92 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS---SCCHHHHHHHHC-----CCTTBCCEEEEEEEC--CCSCC
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch---HHHHHHHHHHhc-----CCCCCCcEEEEEEecCccCCce
Confidence            59999999999999999999999999999999975432   234689999988     67899999998843      44


Q ss_pred             eEEEEEecCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          172 HICIVFEKLGSSLYDFLRK--NNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       172 ~~~lV~e~~~~~L~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      ++||||||+++++.+.+..  .....+++..++.++.||+.||+|||++|||||||||+|||++.+              
T Consensus        93 ~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~--------------  158 (350)
T d1q5ka_          93 YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD--------------  158 (350)
T ss_dssp             EEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTT--------------
T ss_pred             EEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecC--------------
Confidence            6899999997766655532  233579999999999999999999999999999999999999532              


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCC--CCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGEALFQTH  326 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~~Pf~~~  326 (433)
                                  ...+||+|||++......  ....+||+.|+|||++.+ ..|+.++|||||||++|||++|.+||...
T Consensus       159 ------------~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~  226 (350)
T d1q5ka_         159 ------------TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD  226 (350)
T ss_dssp             ------------TCCEEECCCTTCEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCS
T ss_pred             ------------CCceeEecccchhhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCC
Confidence                        236788888887654332  234589999999999876 46899999999999999999999999999


Q ss_pred             ChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          327 ENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       327 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      +..+++..+.+.+|..+.+.+...........      .+....              ...........++++.+||.+|
T Consensus       227 ~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~------~~~~~~--------------~~~~~~~~~~~s~~~~dLl~~m  286 (350)
T d1q5ka_         227 SGVDQLVEIIKVLGTPTREQIREMNPNYTEFK------FPQIKA--------------HPWTKVFRPRTPPEAIALCSRL  286 (350)
T ss_dssp             SHHHHHHHHHHHHCCCCHHHHHHHCC---CCC------CCCCCC--------------CCGGGTSCTTSCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhCCChHHhhhhhccchhhcc------cccccc--------------CchhhhcccCCCHHHHHHHHHH
Confidence            99999999999999998887665433221111      111000              0000112235678999999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~~  428 (433)
                      |++||++||||.|+|+||||++
T Consensus       287 L~~dP~~R~ta~e~L~Hp~f~~  308 (350)
T d1q5ka_         287 LEYTPTARLTPLEACAHSFFDE  308 (350)
T ss_dssp             SCSSGGGSCCHHHHHTSGGGGG
T ss_pred             ccCChhHCcCHHHHhcCHhhcc
Confidence            9999999999999999999975

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.6e-55  Score=411.44  Aligned_cols=253  Identities=21%  Similarity=0.303  Sum_probs=207.1

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      .++|++.+.||+|+||+||+|+++.+++.||||+++......+.+.+|+.+++++     .||||+++++++.+.+.++|
T Consensus        16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l-----~HpnIv~~~~~~~~~~~~~i   90 (287)
T d1opja_          16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-----KHPNLVQLLGVCTREPPFYI   90 (287)
T ss_dssp             GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHC-----CCTTBCCEEEEECSSSSCEE
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhC-----CCCCEecCCccEeeCCeeEE
Confidence            4679999999999999999999999999999999986666677889999999998     67999999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      ||||+ +|+|.+++.......+++..+..++.||+.||+|||++|||||||||+|||++.++                  
T Consensus        91 v~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~------------------  152 (287)
T d1opja_          91 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH------------------  152 (287)
T ss_dssp             EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG------------------
T ss_pred             EeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCC------------------
Confidence            99999 89999999887667899999999999999999999999999999999999996555                  


Q ss_pred             ccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC-CCChH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ-THENL  329 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~-~~~~~  329 (433)
                               .+||+|||+++......    ....||+.|+|||++.+..|+.++|||||||++|||++|..||. +.+..
T Consensus       153 ---------~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~  223 (287)
T d1opja_         153 ---------LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS  223 (287)
T ss_dssp             ---------CEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHH
T ss_pred             ---------cEEEccccceeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHH
Confidence                     45555555555433222    12368999999999999999999999999999999999766554 44433


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +....+..                       +.                         ....++.+++++.+||.+||+.
T Consensus       224 ~~~~~i~~-----------------------~~-------------------------~~~~~~~~~~~l~~li~~cl~~  255 (287)
T d1opja_         224 QVYELLEK-----------------------DY-------------------------RMERPEGCPEKVYELMRACWQW  255 (287)
T ss_dssp             HHHHHHHT-----------------------TC-------------------------CCCCCTTCCHHHHHHHHHHTCS
T ss_pred             HHHHHHhc-----------------------CC-------------------------CCCCCccchHHHHHHHHHHcCC
Confidence            33222111                       00                         0012346678999999999999


Q ss_pred             CCCCCCCHHHHhc--CCCCCC
Q 013973          410 DPTDRLTAREALR--HPFFTR  428 (433)
Q Consensus       410 dP~~R~ta~ell~--hp~f~~  428 (433)
                      ||++|||++|+++  ..++++
T Consensus       256 dP~~Rps~~ei~~~L~~~~~~  276 (287)
T d1opja_         256 NPSDRPSFAEIHQAFETMFQE  276 (287)
T ss_dssp             SGGGSCCHHHHHHHHHHTTSS
T ss_pred             CHhHCcCHHHHHHHHHHHHHh
Confidence            9999999999976  244444

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-54  Score=413.48  Aligned_cols=292  Identities=25%  Similarity=0.436  Sum_probs=212.7

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec---
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY---  169 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~---  169 (433)
                      .++|+++++||+|+||+||+|+++.+|+.||||++...   ......+.+|+.+|+++     .|+|++.+++.+..   
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l-----~h~nii~~~~~~~~~~~   83 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL-----KHENVVNLIEICRTKAS   83 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHC-----CCTTBCCEEEEEEC---
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHh-----cCCCccceEeeeecccc
Confidence            37899999999999999999999999999999998532   23345678899999998     66889999888754   


Q ss_pred             -----CCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCc
Q 013973          170 -----RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  244 (433)
Q Consensus       170 -----~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg  244 (433)
                           .+++|+||||+++.+....... ...+++..++.++.||+.||.|||++|||||||||+|||++.++.+|++|||
T Consensus        84 ~~~~~~~~~~iv~e~~~~~~~~~~~~~-~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg  162 (318)
T d3blha1          84 PYNRCKGSIYLVFDFCEHDLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFG  162 (318)
T ss_dssp             -------CEEEEEECCCEEHHHHHTCT-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCT
T ss_pred             cccccCceEEEEEeccCCCccchhhhc-ccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecc
Confidence                 4578999999966666554433 3579999999999999999999999999999999999999655554444444


Q ss_pred             CCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCC
Q 013973          245 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALF  323 (433)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf  323 (433)
                      ++........                    .........+||+.|+|||++.+. .|+.++|||||||++|||++|++||
T Consensus       163 ~~~~~~~~~~--------------------~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf  222 (318)
T d3blha1         163 LARAFSLAKN--------------------SQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIM  222 (318)
T ss_dssp             TCEECCC-------------------------CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             eeeecccccc--------------------cccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCC
Confidence            4432211000                    000111234799999999999865 6899999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      .+.++.+....+....+..+.+............    .+......           ..........  ...++++.|||
T Consensus       223 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-----------~~~~~~~~~~--~~~~~~~~dLl  285 (318)
T d3blha1         223 QGNTEQHQLALISQLCGSITPEVWPNVDNYELYE----KLELVKGQ-----------KRKVKDRLKA--YVRDPYALDLI  285 (318)
T ss_dssp             CCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-----------CCSSC-----------CBCHHHHHHH--HHCCHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhcCCCChhhccccchhhhhh----hhcccccc-----------cccchhhhcc--ccCCHHHHHHH
Confidence            9999999999999999887765432221111000    00000000           0000000000  12356889999


Q ss_pred             HhccccCCCCCCCHHHHhcCCCCCCCC
Q 013973          404 QGLLRYDPTDRLTAREALRHPFFTRDH  430 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~hp~f~~~~  430 (433)
                      .+||++||++||||+|+|+||||+.++
T Consensus       286 ~~mL~~dP~~R~sa~elL~Hpff~~~p  312 (318)
T d3blha1         286 DKLLVLDPAQRIDSDDALNHDFFWSDP  312 (318)
T ss_dssp             HHHSCSSTTTSCCHHHHHHSGGGSSSS
T ss_pred             HHHCcCChhHCcCHHHHHcChhhccCC
Confidence            999999999999999999999999754

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-54  Score=401.10  Aligned_cols=245  Identities=26%  Similarity=0.394  Sum_probs=196.6

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  176 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV  176 (433)
                      ++|++++.||+|+||+||+|.++ +++.||||+++......+.+.+|+.+++++     +||||+++++++...+.+++|
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l-----~HpnIv~~~g~~~~~~~~~lv   78 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKL-----SHPKLVQLYGVCLEQAPICLV   78 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSSCHHHHHHHHHHHHHC-----CCTTBCCEEEEECSSSSCEEE
T ss_pred             HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcCcHHHHHHHHHHHHhc-----CCCCcccccceeccCCceEEE
Confidence            57999999999999999999986 467799999986666667889999999998     679999999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          177 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       177 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      |||+ +|+|.+++.... ..+++..+..++.||+.||+|||+++||||||||+|||++.++.                  
T Consensus        79 ~E~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~------------------  139 (263)
T d1sm2a_          79 FEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQV------------------  139 (263)
T ss_dssp             EECCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGC------------------
T ss_pred             EEecCCCcHHHHhhccc-cCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCC------------------
Confidence            9999 999999987654 46899999999999999999999999999999999999966554                  


Q ss_pred             cccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChHH
Q 013973          256 FKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  330 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~  330 (433)
                               +||+|||+++......    ....||+.|+|||++.+..|+.++|||||||++|||+| |.+||...+..+
T Consensus       140 ---------~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~  210 (263)
T d1sm2a_         140 ---------IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE  210 (263)
T ss_dssp             ---------EEECSCC------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHH
T ss_pred             ---------eEecccchheeccCCCceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHH
Confidence                     5555555554332211    22468999999999999999999999999999999999 567777666555


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      .+..+.....                      ..                          .+..+++++.+||.+||+.|
T Consensus       211 ~~~~i~~~~~----------------------~~--------------------------~p~~~~~~l~~li~~cl~~~  242 (263)
T d1sm2a_         211 VVEDISTGFR----------------------LY--------------------------KPRLASTHVYQIMNHCWKER  242 (263)
T ss_dssp             HHHHHHHTCC----------------------CC--------------------------CCTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHHHhcCC----------------------CC--------------------------CccccCHHHHHHHHHHccCC
Confidence            5443322110                      00                          12355778999999999999


Q ss_pred             CCCCCCHHHHhcC
Q 013973          411 PTDRLTAREALRH  423 (433)
Q Consensus       411 P~~R~ta~ell~h  423 (433)
                      |++|||++|+++|
T Consensus       243 p~~Rps~~~il~~  255 (263)
T d1sm2a_         243 PEDRPAFSRLLRQ  255 (263)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             HhHCcCHHHHHHH
Confidence            9999999999986

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-55  Score=407.96  Aligned_cols=251  Identities=26%  Similarity=0.380  Sum_probs=203.8

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      .++|++.+.||+|+||.||+|.++ +++.||||+++......+.+.+|+.++.++     .|+||+++++++.+ +.++|
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l-----~HpnIv~~~g~~~~-~~~~i   84 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQL-----QHQRLVRLYAVVTQ-EPIYI   84 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHC-----CCTTBCCEEEEECS-SSCEE
T ss_pred             HHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCcCCHHHHHHHHHHHHhC-----CCCCEeEEEeeecc-CCeEE
Confidence            468999999999999999999986 567899999986666667789999999998     67899999998754 56799


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      ||||+ +|+|.+++.......+++..+..++.||+.||.|||+++||||||||+|||+++                    
T Consensus        85 v~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~--------------------  144 (272)
T d1qpca_          85 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD--------------------  144 (272)
T ss_dssp             EEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT--------------------
T ss_pred             EEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeec--------------------
Confidence            99999 999999876554446999999999999999999999999999999999999954                    


Q ss_pred             ccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhC-CCCCCCCChH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTG-EALFQTHENL  329 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg-~~Pf~~~~~~  329 (433)
                             ++.+||+|||+|+......    ....||+.|||||++.+..|+.++|||||||++|||+|| .+||...+..
T Consensus       145 -------~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~  217 (272)
T d1qpca_         145 -------TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP  217 (272)
T ss_dssp             -------TSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH
T ss_pred             -------ccceeeccccceEEccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHH
Confidence                   4556666666665443222    234789999999999999999999999999999999995 5566665555


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +....+....                      ..                          ..++.++.++.+||.+||+.
T Consensus       218 ~~~~~i~~~~----------------------~~--------------------------~~p~~~~~~l~~li~~cl~~  249 (272)
T d1qpca_         218 EVIQNLERGY----------------------RM--------------------------VRPDNCPEELYQLMRLCWKE  249 (272)
T ss_dssp             HHHHHHHTTC----------------------CC--------------------------CCCTTCCHHHHHHHHHHTCS
T ss_pred             HHHHHHHhcC----------------------CC--------------------------CCcccChHHHHHHHHHHcCC
Confidence            4443322110                      00                          11235677899999999999


Q ss_pred             CCCCCCCHHHHhc--CCCCCC
Q 013973          410 DPTDRLTAREALR--HPFFTR  428 (433)
Q Consensus       410 dP~~R~ta~ell~--hp~f~~  428 (433)
                      ||++|||++||++  |+||+.
T Consensus       250 ~P~~Rpt~~ei~~~L~~~fts  270 (272)
T d1qpca_         250 RPEDRPTFDYLRSVLEDFFTA  270 (272)
T ss_dssp             SGGGSCCHHHHHHHHHHHHHH
T ss_pred             CHhHCcCHHHHHHHhhhhhhc
Confidence            9999999999998  788864

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-53  Score=411.72  Aligned_cols=282  Identities=29%  Similarity=0.513  Sum_probs=215.0

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC--
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR--  170 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~--  170 (433)
                      +.++|+++++||+|+||+||+|+++.+|+.||||+++..  ....+.+.+|+.+|+++     .|++|+++++.+...  
T Consensus         6 i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l-----~hp~iv~~~~~~~~~~~   80 (345)
T d1pmea_           6 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF-----RHENIIGINDIIRAPTI   80 (345)
T ss_dssp             CCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHC-----CCTTBCCCCEEECCSST
T ss_pred             cCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHc-----CCCCCCcEEEEEeeccc
Confidence            346799999999999999999999999999999999743  33456678899999998     678899999888654  


Q ss_pred             ---CeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC
Q 013973          171 ---NHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       171 ---~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                         .++|++|++++++|.+++...   .+++..++.++.||+.||+|||++|||||||||+|||++.++           
T Consensus        81 ~~~~~~~l~~~~~~g~L~~~l~~~---~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~-----------  146 (345)
T d1pmea_          81 EQMKDVYLVTHLMGADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC-----------  146 (345)
T ss_dssp             TTCCCEEEEEECCCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC-----------
T ss_pred             cccceEEEEEeecCCchhhhhhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCC-----------
Confidence               357777777799999999764   599999999999999999999999999999999999996554           


Q ss_pred             CCCCCCcccccCCCCCCEEEEecCCccccCCC------CCceeecCcccchhhhhC-CCCCCcchhHHHHHHHHHHHhCC
Q 013973          248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD------QNYIVSTRHYRAPEVILG-LGWTYPCDIWSVGCILVELCTGE  320 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGv~l~elltg~  320 (433)
                                      .+||+|||++......      ....+||+.|+|||++.. ..|+.++||||+||++|+|++|+
T Consensus       147 ----------------~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~  210 (345)
T d1pmea_         147 ----------------DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR  210 (345)
T ss_dssp             ----------------CEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSS
T ss_pred             ----------------CEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCC
Confidence                            4555555555432211      233579999999999854 56789999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHH
Q 013973          321 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  400 (433)
Q Consensus       321 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (433)
                      .||.+.+..+....+...++.++.............   ......+...               ...........++++.
T Consensus       211 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~---------------~~~~~~~~~~~s~~~~  272 (345)
T d1pmea_         211 PIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKAR---NYLLSLPHKN---------------KVPWNRLFPNADSKAL  272 (345)
T ss_dssp             CSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHH---HHHHTSCCCC---------------CCCHHHHCTTSCHHHH
T ss_pred             CCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhh---cccccCCccC---------------CCCHHHhCCCCCHHHH
Confidence            999999888888888888877766543221100000   0000000000               0001122346778999


Q ss_pred             HHHHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          401 HLLQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       401 ~li~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      +||.+||++||++||||.|+|+||||++.
T Consensus       273 ~li~~~L~~dP~~R~ta~e~L~hpf~~~~  301 (345)
T d1pmea_         273 DLLDKMLTFNPHKRIEVEQALAHPYLEQY  301 (345)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHHTSGGGTTT
T ss_pred             HHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence            99999999999999999999999999843

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.3e-54  Score=405.72  Aligned_cols=259  Identities=22%  Similarity=0.311  Sum_probs=197.6

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      .+.++|++.+.||+|+||+||+|+++.+|+.||||+++..    ......+.+|+.+++.+     +||||+++++++..
T Consensus         4 ~l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~-----~hpniv~~~~~~~~   78 (277)
T d1o6ya_           4 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-----NHPAIVAVYDTGEA   78 (277)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEEEE
T ss_pred             CccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhc-----CCCCCCcccceeee
Confidence            4668899999999999999999999999999999999643    23345677899998877     78999999999876


Q ss_pred             CC----eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCc
Q 013973          170 RN----HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYK  244 (433)
Q Consensus       170 ~~----~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg  244 (433)
                      .+    .+||||||+ |++|.+++...+  .+++.+++.++.||+.||+|||++|||||||||+|||++.++..+++|||
T Consensus        79 ~~~~~~~~~lvmE~~~g~~L~~~~~~~~--~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~  156 (277)
T d1o6ya_          79 ETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFG  156 (277)
T ss_dssp             ECSSSEEEEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCT
T ss_pred             ccCCCceEEEEEECCCCCEehhhhcccC--CCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhh
Confidence            43    489999999 899999998765  79999999999999999999999999999999999999766555555554


Q ss_pred             CCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 013973          245 SSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                      .+.......                     .........+||+.|||||++.+..|+.++|||||||++|||+||.+||.
T Consensus       157 ~~~~~~~~~---------------------~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~  215 (277)
T d1o6ya_         157 IARAIADSG---------------------NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT  215 (277)
T ss_dssp             TCEECC-------------------------------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             hhhhhcccc---------------------ccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCC
Confidence            332111100                     00011233589999999999999999999999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHH
Q 013973          325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  404 (433)
Q Consensus       325 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  404 (433)
                      +.+..+.+..+.......+                                             ....+.+|+++.+||.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~s~~l~~li~  250 (277)
T d1o6ya_         216 GDSPVSVAYQHVREDPIPP---------------------------------------------SARHEGLSADLDAVVL  250 (277)
T ss_dssp             CSSHHHHHHHHHHCCCCCG---------------------------------------------GGTSSSCCHHHHHHHH
T ss_pred             CcCHHHHHHHHHhcCCCCC---------------------------------------------chhccCCCHHHHHHHH
Confidence            8877665544332111100                                             0123467889999999


Q ss_pred             hccccCCCCCC-CHHHHhcCCCC
Q 013973          405 GLLRYDPTDRL-TAREALRHPFF  426 (433)
Q Consensus       405 ~~L~~dP~~R~-ta~ell~hp~f  426 (433)
                      +||++||.+|| |++++ .|+|.
T Consensus       251 ~~L~~dp~~R~~sa~~l-~~~l~  272 (277)
T d1o6ya_         251 KALAKNPENRYQTAAEM-RADLV  272 (277)
T ss_dssp             HHTCSSGGGSCSSHHHH-HHHHH
T ss_pred             HHccCCHhHCHhHHHHH-HHHHH
Confidence            99999999999 55554 45553

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.7e-54  Score=415.85  Aligned_cols=282  Identities=26%  Similarity=0.462  Sum_probs=222.3

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec--
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY--  169 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~--  169 (433)
                      +.++|+++++||+|+||+||+|+++.+|+.||||+++..   ....+.+.+|+.+|+.+     .|+|++++++++..  
T Consensus        16 ~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-----~h~~iv~~~~~~~~~~   90 (348)
T d2gfsa1          16 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-----KHENVIGLLDVFTPAR   90 (348)
T ss_dssp             EETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHC-----CCTTBCCCSEEECSCS
T ss_pred             CCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhc-----CCCCeeeEEEEEeecc
Confidence            367899999999999999999999999999999999643   23445677899999998     67889999998853  


Q ss_pred             ----CCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcC
Q 013973          170 ----RNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKS  245 (433)
Q Consensus       170 ----~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~  245 (433)
                          ...+++++++.||+|.+++...   ++++.+++.++.||+.||+|||++|||||||||+|||++            
T Consensus        91 ~~~~~~~~~i~~~~~gg~L~~~~~~~---~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~------------  155 (348)
T d2gfsa1          91 SLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN------------  155 (348)
T ss_dssp             STTTCCCCEEEEECCSEEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC------------
T ss_pred             ccccCceEEEEEeecCCchhhhcccc---cccHHHHHHHHHHHHHHHHHHHhCCCcccccCCcccccc------------
Confidence                3345665555599999998653   699999999999999999999999999999999999994            


Q ss_pred             CCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCC-CCCcchhHHHHHHHHHHHhCCCCCC
Q 013973          246 SLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                                     .++.+|++|||.+...........||+.|+|||++.+.. ++.++|||||||++|+|++|++||.
T Consensus       156 ---------------~~~~~kl~dfg~a~~~~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~  220 (348)
T d2gfsa1         156 ---------------EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP  220 (348)
T ss_dssp             ---------------TTCCEEECCC----CCTGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred             ---------------ccccccccccchhcccCcccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCC
Confidence                           455677777777766555555668999999999987765 6899999999999999999999999


Q ss_pred             CCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHH
Q 013973          325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  404 (433)
Q Consensus       325 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  404 (433)
                      +.+.......+....+..+.++...................+..                  .........+++++|||.
T Consensus       221 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~s~~~~dli~  282 (348)
T d2gfsa1         221 GTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKM------------------NFANVFIGANPLAVDLLE  282 (348)
T ss_dssp             CSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCC------------------CHHHHSTTCCHHHHHHHH
T ss_pred             CCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCc------------------chhhhcCCCCHHHHHHHH
Confidence            99999999999999888887765543222221111111111110                  001123467889999999


Q ss_pred             hccccCCCCCCCHHHHhcCCCCCCC
Q 013973          405 GLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       405 ~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      +||+.||++||||+|+|+||||++-
T Consensus       283 ~mL~~dP~~R~ta~elL~Hp~f~~~  307 (348)
T d2gfsa1         283 KMLVLDSDKRITAAQALAHAYFAQY  307 (348)
T ss_dssp             HHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             HHCcCChhhCcCHHHHhcCHhhCCC
Confidence            9999999999999999999999853

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-53  Score=402.03  Aligned_cols=278  Identities=28%  Similarity=0.452  Sum_probs=218.0

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      ++|+++++||+|+||+||+|+++.+++.||||+++..   ......+.+|+.+++.+     .|+||+++++++.+....
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l-----~h~niv~~~~~~~~~~~~   76 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-----KHKNIVRLHDVLHSDKKL   76 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTC-----CCTTBCCEEEEEECSSEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhc-----CcCCEEeeccccccccce
Confidence            5799999999999999999999999999999998643   23456778899999887     678999999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      ++|||++ +++|..++...  +.+++..++.++.|++.||+|||++|||||||||+|||++                   
T Consensus        77 ~iv~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~-------------------  135 (292)
T d1unla_          77 TLVFEFCDQDLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN-------------------  135 (292)
T ss_dssp             EEEEECCSEEHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-------------------
T ss_pred             eEEeeeccccccccccccc--cccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccc-------------------
Confidence            9999999 66777766654  4799999999999999999999999999999999999994                   


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCC---CceeecCcccchhhhhCCC-CCCcchhHHHHHHHHHHHhCCCCC-CCCC
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQ---NYIVSTRHYRAPEVILGLG-WTYPCDIWSVGCILVELCTGEALF-QTHE  327 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGv~l~elltg~~Pf-~~~~  327 (433)
                              .++.+||+|||.+.......   ....+++.|+|||++.+.. ++.++|||||||++|||++|..|| .+.+
T Consensus       136 --------~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~  207 (292)
T d1unla_         136 --------RNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND  207 (292)
T ss_dssp             --------TTCCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS
T ss_pred             --------cCCceeeeecchhhcccCCCccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCC
Confidence                    44567777777776544322   2346788999999998765 689999999999999999999885 5566


Q ss_pred             hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcc
Q 013973          328 NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLL  407 (433)
Q Consensus       328 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  407 (433)
                      ..+.+..+....+..+...+........    ........                ...........+++++.+||.+||
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~----------------~~~~~~~~~~~~s~~~~dll~~mL  267 (292)
T d1unla_         208 VDDQLKRIFRLLGTPTEEQWPSMTKLPD----YKPYPMYP----------------ATTSLVNVVPKLNATGRDLLQNLL  267 (292)
T ss_dssp             HHHHHHHHHHHHCCCCTTTCTTGGGSTT----CCCCCCCC----------------TTCCCTTTSTTCCHHHHHHHHHHS
T ss_pred             HHHHHHHHHhhcCCCChhhhhhhhhccc----cccccccc----------------ccchhhhccccCCHHHHHHHHHHc
Confidence            6777787877777766543222111110    00000000                001111223466788999999999


Q ss_pred             ccCCCCCCCHHHHhcCCCCCC
Q 013973          408 RYDPTDRLTAREALRHPFFTR  428 (433)
Q Consensus       408 ~~dP~~R~ta~ell~hp~f~~  428 (433)
                      +.||.+||||+|+|+||||++
T Consensus       268 ~~dP~~R~sa~e~L~Hp~f~~  288 (292)
T d1unla_         268 KCNPVQRISAEEALQHPYFSD  288 (292)
T ss_dssp             CSSGGGSCCHHHHTTSGGGSS
T ss_pred             cCChhHCcCHHHHhcChhhcC
Confidence            999999999999999999975

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=2.5e-53  Score=408.40  Aligned_cols=283  Identities=25%  Similarity=0.496  Sum_probs=211.6

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec--CCeE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY--RNHI  173 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~--~~~~  173 (433)
                      .++|+++++||+|+||+||+|+++.+|+.||||+++...  .+.+.+|+.+|+.+.    +|+||++++++|..  ...+
T Consensus        34 ~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~Ei~il~~l~----~hpnIv~~~~~~~~~~~~~~  107 (328)
T d3bqca1          34 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK--KKKIKREIKILENLR----GGPNIITLADIVKDPVSRTP  107 (328)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC--HHHHHHHHHHHHHHT----TSTTBCCEEEEEECTTTCSE
T ss_pred             CcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH--HHHHHHHHHHHHhcc----CCCCCcEEEEEEEecCCCce
Confidence            367999999999999999999999999999999997433  456788999999984    36889999999874  4679


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      ++||||+ +++|..+.     +.+++..++.++.||+.||+|||++|||||||||+|||++.+                 
T Consensus       108 ~~v~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~-----------------  165 (328)
T d3bqca1         108 ALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE-----------------  165 (328)
T ss_dssp             EEEEECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETT-----------------
T ss_pred             eEEEeecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCC-----------------
Confidence            9999999 77876542     369999999999999999999999999999999999999643                 


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCC--CCceeecCcccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC-Ch
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPD--QNYIVSTRHYRAPEVILGL-GWTYPCDIWSVGCILVELCTGEALFQTH-EN  328 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGv~l~elltg~~Pf~~~-~~  328 (433)
                               +..+||+|||++......  ....+||+.|+|||.+.+. .|+.++||||+||++|||++|..||... +.
T Consensus       166 ---------~~~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~  236 (328)
T d3bqca1         166 ---------HRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN  236 (328)
T ss_dssp             ---------TTEEEECCGGGCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH
T ss_pred             ---------CCeeeecccccceeccCCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchh
Confidence                     235777888877654433  2445799999999998875 4799999999999999999999999754 45


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCC--CccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhc
Q 013973          329 LEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPE--GAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGL  406 (433)
Q Consensus       329 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  406 (433)
                      .++...+...+|.........      .........+..  ..........        .........+++++.|||.+|
T Consensus       237 ~~~~~~i~~~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~s~~~~dli~~m  302 (328)
T d3bqca1         237 YDQLVRIAKVLGTEDLYDYID------KYNIELDPRFNDILGRHSRKRWER--------FVHSENQHLVSPEALDFLDKL  302 (328)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHH------HTTCCCCGGGGGTCCCCCCCCGGG--------GCCTTTGGGCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCchhhhhhh------hcccccCcccchhcccccccchhh--------cccccccccCCHHHHHHHHHH
Confidence            556666666666422211110      000000000000  0000000000        000112234678999999999


Q ss_pred             cccCCCCCCCHHHHhcCCCCCCC
Q 013973          407 LRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       407 L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      |++||++||||+|+|+||||++-
T Consensus       303 L~~dP~~R~ta~e~L~Hp~F~~v  325 (328)
T d3bqca1         303 LRYDHQSRLTAREAMEHPYFYTV  325 (328)
T ss_dssp             SCSSGGGSCCHHHHHTSGGGTTS
T ss_pred             ccCChhHCcCHHHHhcCcccCCC
Confidence            99999999999999999999874

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6e-54  Score=401.92  Aligned_cols=248  Identities=23%  Similarity=0.323  Sum_probs=194.0

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      .++|++.+.||+|+||+||+|+.+   ..||||+++..   ....+.+.+|+.+++++     +||||+++++++. .+.
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l-----~HpnIv~~~~~~~-~~~   77 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-----RHVNILLFMGYST-APQ   77 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTC-----CCTTBCCEEEEEC-SSS
T ss_pred             cccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-----CCCCEeeeeEEEe-ccE
Confidence            467999999999999999999754   34999998632   34456778899999888     6799999998765 466


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPK  251 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~  251 (433)
                      ++|||||+ +|+|.++|.... ..+++..+..++.||+.||+|||++|||||||||+|||++.++.              
T Consensus        78 ~~lv~Ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~--------------  142 (276)
T d1uwha_          78 LAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLT--------------  142 (276)
T ss_dssp             CEEEEECCCEEEHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSS--------------
T ss_pred             EEEEEecCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCC--------------
Confidence            89999999 899999998654 46999999999999999999999999999999999999965554              


Q ss_pred             CCcccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhCC---CCCCcchhHHHHHHHHHHHhCCCCC
Q 013973          252 DSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGL---GWTYPCDIWSVGCILVELCTGEALF  323 (433)
Q Consensus       252 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlGv~l~elltg~~Pf  323 (433)
                                   +||+|||+++.....     .....||+.|||||++.+.   .|+.++|||||||++|||+||+.||
T Consensus       143 -------------~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf  209 (276)
T d1uwha_         143 -------------VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY  209 (276)
T ss_dssp             -------------EEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             -------------EEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCC
Confidence                         555555555432211     1235799999999999753   4899999999999999999999999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      .+.+...............|.                                           ....+..+++++.+||
T Consensus       210 ~~~~~~~~~~~~~~~~~~~p~-------------------------------------------~~~~~~~~~~~l~~li  246 (276)
T d1uwha_         210 SNINNRDQIIFMVGRGYLSPD-------------------------------------------LSKVRSNCPKAMKRLM  246 (276)
T ss_dssp             TTCCCHHHHHHHHHHTSCCCC-------------------------------------------GGGSCTTCCHHHHHHH
T ss_pred             CCCChHHHHHHHHhcCCCCCc-------------------------------------------chhccccchHHHHHHH
Confidence            887665544333221111110                                           0112345678999999


Q ss_pred             HhccccCCCCCCCHHHHhcC
Q 013973          404 QGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~h  423 (433)
                      .+||+.||++|||+.|+++|
T Consensus       247 ~~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         247 AECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             HHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHcCCCHhHCcCHHHHHHH
Confidence            99999999999999999876

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-53  Score=409.09  Aligned_cols=250  Identities=20%  Similarity=0.288  Sum_probs=198.8

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCC-----eEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERK-----EMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~-----~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      .++|++.+.||+|+||+||+|++..++     ..||+|++...  ......+..|+.++.++.    +||||+++++++.
T Consensus        36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----~HpnIv~l~~~~~  111 (325)
T d1rjba_          36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLG----SHENIVNLLGACT  111 (325)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHC----CCTTBCCEEEEEC
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhc----CCCcEeEEEEEEe
Confidence            367999999999999999999987654     36999998532  334456778999998873    5688999999999


Q ss_pred             cCCeEEEEEecC-CCCHHHHHHhcCC---------------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCC
Q 013973          169 YRNHICIVFEKL-GSSLYDFLRKNNY---------------------RSFPIDLVREIARQLLECIAFMHDLCMIHTDLK  226 (433)
Q Consensus       169 ~~~~~~lV~e~~-~~~L~~~l~~~~~---------------------~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlK  226 (433)
                      +.+.+||||||| +|+|.++|.....                     ..+++..++.|+.||+.||+|||++||||||||
T Consensus       112 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlK  191 (325)
T d1rjba_         112 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLA  191 (325)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCS
T ss_pred             eCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCc
Confidence            999999999999 9999999976432                     358999999999999999999999999999999


Q ss_pred             CCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCC
Q 013973          227 PENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWT  301 (433)
Q Consensus       227 p~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~  301 (433)
                      |+|||++.++.                           +||+|||+|+......     ....||+.|||||++.+..|+
T Consensus       192 p~Nill~~~~~---------------------------~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~  244 (325)
T d1rjba_         192 ARNVLVTHGKV---------------------------VKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYT  244 (325)
T ss_dssp             GGGEEEETTTE---------------------------EEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCC
T ss_pred             hhccccccCCe---------------------------EEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCC
Confidence            99999965554                           5555555554332222     234689999999999999999


Q ss_pred             CcchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhcc
Q 013973          302 YPCDIWSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMK  380 (433)
Q Consensus       302 ~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  380 (433)
                      .++|||||||++|||+| |..||.+.+..+.+..+...-.                     .+                 
T Consensus       245 ~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~---------------------~~-----------------  286 (325)
T d1rjba_         245 IKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGF---------------------KM-----------------  286 (325)
T ss_dssp             HHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTC---------------------CC-----------------
T ss_pred             cceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCC---------------------CC-----------------
Confidence            99999999999999998 8999987665444433221100                     01                 


Q ss_pred             chhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          381 LPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                               +.+..+++++++||.+||+.||++|||++||++|
T Consensus       287 ---------~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         287 ---------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             ---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                     1223567889999999999999999999999976

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.6e-53  Score=402.38  Aligned_cols=247  Identities=24%  Similarity=0.348  Sum_probs=193.8

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCe---EEEEEEeec--chhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKE---MVAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~---~vAiK~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      .++|++.+.||+|+||+||+|+++.+++   .||||.+..  .....+.+.+|+.+++++     .||||+++++++...
T Consensus        25 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~HpnIv~l~g~~~~~   99 (299)
T d1jpaa_          25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF-----DHPNVIHLEGVVTKS   99 (299)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTC-----CCTTBCCEEEEECSS
T ss_pred             hhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhC-----CCCCCccEEEEEeeC
Confidence            3679999999999999999999987664   589998863  234456788999999888     679999999999999


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      +.+|+||||| +|+|.+++.... ..+++.++..++.||+.||+|||++|||||||||+|||++.++.            
T Consensus       100 ~~~~iv~Ey~~~g~L~~~~~~~~-~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~------------  166 (299)
T d1jpaa_         100 TPVMIITEFMENGSLDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLV------------  166 (299)
T ss_dssp             SSCEEEEECCTTEEHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCC------------
T ss_pred             CEEEEEEEecCCCcceeeecccc-CCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCc------------
Confidence            9999999999 899999988654 46999999999999999999999999999999999999965554            


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCC--------CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GE  320 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~  320 (433)
                                     +||+|||+++......        ....||+.|||||++.+..|+.++|||||||++|||+| |.
T Consensus       167 ---------------~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~  231 (299)
T d1jpaa_         167 ---------------CKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE  231 (299)
T ss_dssp             ---------------EEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             ---------------EEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCC
Confidence                           5555555544322211        11357999999999999999999999999999999998 89


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHH
Q 013973          321 ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLT  400 (433)
Q Consensus       321 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (433)
                      .||.+.+..+....+....                      ...                          .+..++.++.
T Consensus       232 ~Pf~~~~~~~~~~~i~~~~----------------------~~~--------------------------~~~~~~~~l~  263 (299)
T d1jpaa_         232 RPYWDMTNQDVINAIEQDY----------------------RLP--------------------------PPMDCPSALH  263 (299)
T ss_dssp             CTTTTCCHHHHHHHHHTTC----------------------CCC--------------------------CCTTCCHHHH
T ss_pred             CCCCCCCHHHHHHHHHcCC----------------------CCC--------------------------CCccchHHHH
Confidence            9999877766554432210                      000                          1235677899


Q ss_pred             HHHHhccccCCCCCCCHHHHhcC
Q 013973          401 HLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       401 ~li~~~L~~dP~~R~ta~ell~h  423 (433)
                      +||.+||+.||++|||+.||+++
T Consensus       264 ~li~~cl~~~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         264 QLMLDCWQKDRNHRPKFGQIVNT  286 (299)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHH
Confidence            99999999999999999988764

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-53  Score=394.59  Aligned_cols=245  Identities=21%  Similarity=0.332  Sum_probs=204.8

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIV  176 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV  176 (433)
                      ++|+++++||+|+||+||+|+++ +++.||||+++......+.+.+|+.+++++     +||||+++++++.+.+.+++|
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l-----~HpnIv~~~g~~~~~~~~~iv   77 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNL-----SHEKLVQLYGVCTKQRPIFII   77 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSSCHHHHHHHHHHHHTC-----CCTTBCCEEEEECCSSSEEEE
T ss_pred             HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcCCHHHHHHHHHHHHhc-----CCCceeeEEEEEeeCCceEEE
Confidence            56899999999999999999985 778899999987666677889999999988     679999999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCcc
Q 013973          177 FEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSY  255 (433)
Q Consensus       177 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~  255 (433)
                      |||+ +|+|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||+++++                   
T Consensus        78 ~Ey~~~g~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~-------------------  137 (258)
T d1k2pa_          78 TEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQG-------------------  137 (258)
T ss_dssp             EECCTTEEHHHHHHSGG-GCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTC-------------------
T ss_pred             EEccCCCcHHHhhhccc-cCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCC-------------------
Confidence            9999 899999976553 3689999999999999999999999999999999999995544                   


Q ss_pred             cccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChHH
Q 013973          256 FKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLE  330 (433)
Q Consensus       256 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~  330 (433)
                              .+||+|||++.......    ....||+.|+|||++.+..|+.++|||||||++|||+| |+.||.+.+..+
T Consensus       138 --------~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~  209 (258)
T d1k2pa_         138 --------VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE  209 (258)
T ss_dssp             --------CEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH
T ss_pred             --------cEEECcchhheeccCCCceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHH
Confidence                    55566666554332221    12468999999999999999999999999999999998 899999888776


Q ss_pred             HHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccC
Q 013973          331 HLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYD  410 (433)
Q Consensus       331 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  410 (433)
                      ....+.....                      .                          ..+...++++.+||.+||+.|
T Consensus       210 ~~~~i~~~~~----------------------~--------------------------~~p~~~~~~l~~li~~cl~~d  241 (258)
T d1k2pa_         210 TAEHIAQGLR----------------------L--------------------------YRPHLASEKVYTIMYSCWHEK  241 (258)
T ss_dssp             HHHHHHTTCC----------------------C--------------------------CCCTTCCHHHHHHHHHTTCSS
T ss_pred             HHHHHHhCCC----------------------C--------------------------CCcccccHHHHHHHHHHccCC
Confidence            5554332110                      0                          012355678999999999999


Q ss_pred             CCCCCCHHHHhcC
Q 013973          411 PTDRLTAREALRH  423 (433)
Q Consensus       411 P~~R~ta~ell~h  423 (433)
                      |++|||+.|+++|
T Consensus       242 P~~RPt~~eil~~  254 (258)
T d1k2pa_         242 ADERPTFKILLSN  254 (258)
T ss_dssp             GGGSCCHHHHHHH
T ss_pred             HhHCcCHHHHHHH
Confidence            9999999999986

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-53  Score=398.39  Aligned_cols=254  Identities=25%  Similarity=0.365  Sum_probs=199.8

Q ss_pred             CcEEEEee-eeccccEEEEEEEECC--CCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC
Q 013973           97 SRYKIHSK-MGEGTFGQVLECWDRE--RKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN  171 (433)
Q Consensus        97 ~~~~~~~~-iG~G~~g~V~~~~~~~--~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~  171 (433)
                      ++|.+.+. ||+|+||+||+|.++.  ++..||||+++..  ....+.+.+|+.+++++     +||||+++++++.+ +
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~l~g~~~~-~   81 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-----DNPYIVRLIGVCQA-E   81 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEES-S
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhC-----CCCCEeeEeeeecc-C
Confidence            56888884 9999999999998764  4557999999642  34456788999999998     67999999999875 4


Q ss_pred             eEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCC
Q 013973          172 HICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTP  250 (433)
Q Consensus       172 ~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~  250 (433)
                      .+||||||+ +|+|.+++.... ..+++..+..++.||+.||+|||++|||||||||+|||++.++.+||+|||++....
T Consensus        82 ~~~lvmE~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~  160 (285)
T d1u59a_          82 ALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALG  160 (285)
T ss_dssp             SEEEEEECCTTEEHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred             eEEEEEEeCCCCcHHHHhhccc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhccc
Confidence            689999999 899999986543 479999999999999999999999999999999999999776655555555543322


Q ss_pred             CCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChH
Q 013973          251 KDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENL  329 (433)
Q Consensus       251 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~  329 (433)
                      .....                     ........||+.|||||++.+..|+.++|||||||++|||+| |..||.+.+..
T Consensus       161 ~~~~~---------------------~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~  219 (285)
T d1u59a_         161 ADDSY---------------------YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP  219 (285)
T ss_dssp             TCSCE---------------------ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH
T ss_pred             ccccc---------------------cccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHH
Confidence            11100                     001123468999999999999999999999999999999998 99999987766


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +....+..                       |..                         ...++.+++++.+||.+||+.
T Consensus       220 ~~~~~i~~-----------------------~~~-------------------------~~~p~~~~~~l~~li~~cl~~  251 (285)
T d1u59a_         220 EVMAFIEQ-----------------------GKR-------------------------MECPPECPPELYALMSDCWIY  251 (285)
T ss_dssp             HHHHHHHT-----------------------TCC-------------------------CCCCTTCCHHHHHHHHHTTCS
T ss_pred             HHHHHHHc-----------------------CCC-------------------------CCCCCcCCHHHHHHHHHHcCC
Confidence            65544321                       110                         012345678999999999999


Q ss_pred             CCCCCCCHHHH---hcCCCC
Q 013973          410 DPTDRLTAREA---LRHPFF  426 (433)
Q Consensus       410 dP~~R~ta~el---l~hp~f  426 (433)
                      ||++|||+.+|   |+|+|+
T Consensus       252 ~p~~RPs~~~i~~~L~~~~~  271 (285)
T d1u59a_         252 KWEDRPDFLTVEQRMRACYY  271 (285)
T ss_dssp             SGGGSCCHHHHHHHHHHHHH
T ss_pred             CHhHCcCHHHHHHHHHHHHH
Confidence            99999999877   667776

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-53  Score=397.17  Aligned_cols=247  Identities=23%  Similarity=0.369  Sum_probs=192.9

Q ss_pred             eeeeccccEEEEEEEEC--CCCeEEEEEEeecc---hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEE
Q 013973          103 SKMGEGTFGQVLECWDR--ERKEMVAIKIVRGI---KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVF  177 (433)
Q Consensus       103 ~~iG~G~~g~V~~~~~~--~~~~~vAiK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~  177 (433)
                      ++||+|+||+||+|.++  .+++.||||+++..   ....+.+.+|+.+++++     +||||++++++++.+ ..+|||
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l-----~HpnIv~~~g~~~~~-~~~lvm   86 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-----DNPYIVRMIGICEAE-SWMLVM   86 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTC-----CCTTBCCEEEEEESS-SEEEEE
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhC-----CCCCCceEEEEeccC-CEEEEE
Confidence            47999999999999864  45678999998632   23346688899999888     779999999998654 578999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCccc
Q 013973          178 EKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSSYF  256 (433)
Q Consensus       178 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~~~  256 (433)
                      ||+ +|+|.+++....  .+++..+..++.||+.||+|||++|||||||||+|||++.++.+||+|||++......... 
T Consensus        87 E~~~~g~L~~~l~~~~--~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~-  163 (277)
T d1xbba_          87 EMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY-  163 (277)
T ss_dssp             ECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE-
T ss_pred             EcCCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhccccccc-
Confidence            999 899999998764  7999999999999999999999999999999999999977666555555554322111000 


Q ss_pred             ccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 013973          257 KRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHLAMM  335 (433)
Q Consensus       257 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~~~~~i  335 (433)
                                          ........||+.|||||++.+..|+.++|||||||++|||+| |..||.+.+..+....+
T Consensus       164 --------------------~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i  223 (277)
T d1xbba_         164 --------------------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML  223 (277)
T ss_dssp             --------------------EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH
T ss_pred             --------------------cccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHH
Confidence                                000122468999999999999999999999999999999998 89999987766554433


Q ss_pred             HHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCC
Q 013973          336 ERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRL  415 (433)
Q Consensus       336 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  415 (433)
                      ...  .                    ...                          .+..++.++.+||.+||+.||++||
T Consensus       224 ~~~--~--------------------~~~--------------------------~p~~~~~~~~~li~~cl~~dp~~RP  255 (277)
T d1xbba_         224 EKG--E--------------------RMG--------------------------CPAGCPREMYDLMNLCWTYDVENRP  255 (277)
T ss_dssp             HTT--C--------------------CCC--------------------------CCTTCCHHHHHHHHHHTCSSTTTSC
T ss_pred             HcC--C--------------------CCC--------------------------CCcccCHHHHHHHHHHcCCCHhHCc
Confidence            210  0                    011                          1235678999999999999999999


Q ss_pred             CHHHH---hcCCCC
Q 013973          416 TAREA---LRHPFF  426 (433)
Q Consensus       416 ta~el---l~hp~f  426 (433)
                      |++||   |+|+|+
T Consensus       256 s~~~i~~~L~~~~~  269 (277)
T d1xbba_         256 GFAAVELRLRNYYY  269 (277)
T ss_dssp             CHHHHHHHHHHHHH
T ss_pred             CHHHHHHHhhCHHh
Confidence            99998   566664

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-52  Score=394.36  Aligned_cols=252  Identities=26%  Similarity=0.348  Sum_probs=201.3

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      .++|++.+.||+|+||.||+|+++.+ +.||||+++......+.+.+|+.+++++     +|+||+++++++.+ +.+++
T Consensus        16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~~~~~~~~E~~~l~~l-----~h~nIv~~~g~~~~-~~~~l   88 (285)
T d1fmka3          16 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKL-----RHEKLVQLYAVVSE-EPIYI   88 (285)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSSCHHHHHHHHHHHHHC-----CCTTBCCEEEEECS-SSCEE
T ss_pred             HHHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcccCCHHHHHHHHHHHHhc-----ccCCEeEEEEEEec-CCeEE
Confidence            36799999999999999999998766 5699999986666667889999999998     77899999999865 56789


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          176 VFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       176 V~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      ||||+ +|+|..++.......+++.+++.++.||+.||+|||++|||||||||+||||+.++.                 
T Consensus        89 v~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~-----------------  151 (285)
T d1fmka3          89 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV-----------------  151 (285)
T ss_dssp             EECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC-----------------
T ss_pred             EEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCc-----------------
Confidence            99999 899999987654457999999999999999999999999999999999999965554                 


Q ss_pred             ccccCCCCCCEEEEecCCccccCCCC----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCC-CCCCCCChH
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPDQ----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE-ALFQTHENL  329 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~-~Pf~~~~~~  329 (433)
                                +||+|||+++......    ....||+.|+|||++.+..++.++|||||||++|||++|. +||......
T Consensus       152 ----------~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~  221 (285)
T d1fmka3         152 ----------CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR  221 (285)
T ss_dssp             ----------EEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH
T ss_pred             ----------EEEcccchhhhccCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHH
Confidence                      5555555554332211    2246899999999999999999999999999999999964 555655555


Q ss_pred             HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhcccc
Q 013973          330 EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRY  409 (433)
Q Consensus       330 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  409 (433)
                      +.+..+....                      ..                          +.+..++.++++||.+||+.
T Consensus       222 ~~~~~i~~~~----------------------~~--------------------------~~~~~~~~~l~~li~~cl~~  253 (285)
T d1fmka3         222 EVLDQVERGY----------------------RM--------------------------PCPPECPESLHDLMCQCWRK  253 (285)
T ss_dssp             HHHHHHHTTC----------------------CC--------------------------CCCTTSCHHHHHHHHHHTCS
T ss_pred             HHHHHHHhcC----------------------CC--------------------------CCCcccCHHHHHHHHHHccc
Confidence            5544432110                      00                          11235678899999999999


Q ss_pred             CCCCCCCHHHHhc--CCCCCCC
Q 013973          410 DPTDRLTAREALR--HPFFTRD  429 (433)
Q Consensus       410 dP~~R~ta~ell~--hp~f~~~  429 (433)
                      ||++|||+++|++  |+||+..
T Consensus       254 dP~~Rps~~~i~~~L~~~~~~~  275 (285)
T d1fmka3         254 EPEERPTFEYLQAFLEDYFTST  275 (285)
T ss_dssp             SGGGSCCHHHHHHHHHTTTSCS
T ss_pred             CHhHCcCHHHHHHHHhhhhcCC
Confidence            9999999999998  8999764

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-51  Score=384.54  Aligned_cols=246  Identities=21%  Similarity=0.291  Sum_probs=191.0

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCC----eEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERK----EMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~----~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      .+.|++.++||+|+||.||+|.++.++    ..||||+++..  ......+.+|+.+++++     .|+||+++++++.+
T Consensus         6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l-----~H~nIv~~~g~~~~   80 (283)
T d1mqba_           6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF-----SHHNIIRLEGVISK   80 (283)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEECS
T ss_pred             HHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhc-----CCCCEeeeeEEEec
Confidence            356999999999999999999987654    47999998642  33445678899999888     67999999999999


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                      .+.+++||||+ ++++.+++.... ..+++..+..++.||+.||+|||+++||||||||+||||+.++            
T Consensus        81 ~~~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~------------  147 (283)
T d1mqba_          81 YKPMMIITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNL------------  147 (283)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC------------
T ss_pred             CCceEEEEEecccCcchhhhhccc-ccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCC------------
Confidence            99999999999 888888877653 4799999999999999999999999999999999999995544            


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCC------CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCC-C
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGE-A  321 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~-~  321 (433)
                                     .+||+|||+++......      ....||+.|||||++.+..|+.++|||||||++|||++|. +
T Consensus       148 ---------------~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~  212 (283)
T d1mqba_         148 ---------------VCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGER  212 (283)
T ss_dssp             ---------------CEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ---------------eEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCC
Confidence                           55555555554332211      1236899999999999999999999999999999999965 4


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       322 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      ||...+..+.+..+....                      ..                          +.+..++.++.+
T Consensus       213 ~~~~~~~~~~~~~i~~~~----------------------~~--------------------------~~~~~~~~~l~~  244 (283)
T d1mqba_         213 PYWELSNHEVMKAINDGF----------------------RL--------------------------PTPMDCPSAIYQ  244 (283)
T ss_dssp             TTTTCCHHHHHHHHHTTC----------------------CC--------------------------CCCTTCBHHHHH
T ss_pred             ccccCCHHHHHHHHhccC----------------------CC--------------------------CCchhhHHHHHH
Confidence            555545444333221100                      00                          112356778999


Q ss_pred             HHHhccccCCCCCCCHHHHhc
Q 013973          402 LLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       402 li~~~L~~dP~~R~ta~ell~  422 (433)
                      ||.+||+.||++|||+.||++
T Consensus       245 li~~cl~~~p~~RPt~~eil~  265 (283)
T d1mqba_         245 LMMQCWQQERARRPKFADIVS  265 (283)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHCcCCHhHCcCHHHHHH
Confidence            999999999999999999876

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-52  Score=398.48  Aligned_cols=256  Identities=24%  Similarity=0.408  Sum_probs=204.5

Q ss_pred             CcEEEEeeeeccccEEEEEEEE---CCCCeEEEEEEeecc-----hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           97 SRYKIHSKMGEGTFGQVLECWD---RERKEMVAIKIVRGI-----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~---~~~~~~vAiK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      ++|++++.||+|+||+||+|++   +.+|+.||||+++..     ....+.+..|+.+++++.|    +|||++++++++
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h----~pnIv~~~~~~~   99 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQ----SPFLVTLHYAFQ   99 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHT----CTTBCCEEEEEE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccC----CCeEEEeeeeec
Confidence            6799999999999999999987   457899999998532     2234556789999999954    367999999999


Q ss_pred             cCCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCC
Q 013973          169 YRNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSL  247 (433)
Q Consensus       169 ~~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~  247 (433)
                      +...+++||||+ +++|.+++...+  .+++..+..++.||+.||+|||++|||||||||+|||++.             
T Consensus       100 ~~~~~~~v~e~~~~~~L~~~i~~~~--~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~-------------  164 (322)
T d1vzoa_         100 TETKLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDS-------------  164 (322)
T ss_dssp             ETTEEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT-------------
T ss_pred             cCCceeeeeecccccHHHHHHHhcc--cccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecC-------------
Confidence            999999999999 999999998775  7889999999999999999999999999999999999954             


Q ss_pred             CCCCCCcccccCCCCCCEEEEecCCccccCCC----CCceeecCcccchhhhhCC--CCCCcchhHHHHHHHHHHHhCCC
Q 013973          248 HTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVSTRHYRAPEVILGL--GWTYPCDIWSVGCILVELCTGEA  321 (433)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~--~~~~~~DvwSlGv~l~elltg~~  321 (433)
                                    ++.+||+|||++......    .....||+.|+|||.+.+.  .++.++|||||||++|||++|..
T Consensus       165 --------------~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~  230 (322)
T d1vzoa_         165 --------------NGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGAS  230 (322)
T ss_dssp             --------------TSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSC
T ss_pred             --------------CCCEEEeeccchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCC
Confidence                          455666677766533221    1335799999999999865  46889999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       322 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      ||.+.+..+....+.....                   .+.                          ...+..+++++.+
T Consensus       231 PF~~~~~~~~~~~i~~~~~-------------------~~~--------------------------~~~~~~~s~~~~~  265 (322)
T d1vzoa_         231 PFTVDGEKNSQAEISRRIL-------------------KSE--------------------------PPYPQEMSALAKD  265 (322)
T ss_dssp             TTSCTTSCCCHHHHHHHHH-------------------HCC--------------------------CCCCTTSCHHHHH
T ss_pred             CCCCCCHHHHHHHHHHhcc-------------------cCC--------------------------CCCcccCCHHHHH
Confidence            9987654333222211100                   000                          1123457889999


Q ss_pred             HHHhccccCCCCCC-----CHHHHhcCCCCCCCC
Q 013973          402 LLQGLLRYDPTDRL-----TAREALRHPFFTRDH  430 (433)
Q Consensus       402 li~~~L~~dP~~R~-----ta~ell~hp~f~~~~  430 (433)
                      ||.+||++||++||     ||+|+|+||||++.+
T Consensus       266 li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i~  299 (322)
T d1vzoa_         266 LIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN  299 (322)
T ss_dssp             HHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCC
T ss_pred             HHHHHcccCHHHcCCCCcccHHHHHcCHhhcCCC
Confidence            99999999999999     589999999998743

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-51  Score=389.80  Aligned_cols=250  Identities=22%  Similarity=0.299  Sum_probs=189.1

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECC-----CCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRE-----RKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~-----~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      .++|++.++||+|+||.||+|.+..     +++.||||+++..  ....+.+..|..++.++.    +|++|+.+++.+.
T Consensus        12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~----~h~~iv~~~~~~~   87 (299)
T d1ywna1          12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG----HHLNVVNLLGACT   87 (299)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHC----CCTTBCCEEEEEC
T ss_pred             HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhc----CCCeEEEeeeeec
Confidence            3679999999999999999999754     4578999998632  233455667777777773    4567888888765


Q ss_pred             c-CCeEEEEEecC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEe
Q 013973          169 Y-RNHICIVFEKL-GSSLYDFLRKNN--------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLL  232 (433)
Q Consensus       169 ~-~~~~~lV~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl  232 (433)
                      . ...+++||||| +|+|.++|....              ...+++..+..++.||+.||+|||++|||||||||+|||+
T Consensus        88 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl  167 (299)
T d1ywna1          88 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL  167 (299)
T ss_dssp             STTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred             cCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeE
Confidence            4 56799999999 999999997542              2358999999999999999999999999999999999999


Q ss_pred             eccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhCCCCCCcchhH
Q 013973          233 VSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYPCDIW  307 (433)
Q Consensus       233 ~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Dvw  307 (433)
                      +.++.+                           ||+|||+|+.....     ....+||+.|||||++.+..|+.++|||
T Consensus       168 ~~~~~~---------------------------Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiw  220 (299)
T d1ywna1         168 SEKNVV---------------------------KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW  220 (299)
T ss_dssp             CGGGCE---------------------------EECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHH
T ss_pred             CCCCcE---------------------------EEccCcchhhccccccccccCceeeCccccchhHhhcCCCCccccee
Confidence            665554                           55555544322211     1235799999999999999999999999


Q ss_pred             HHHHHHHHHHhC-CCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHH
Q 013973          308 SVGCILVELCTG-EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQN  386 (433)
Q Consensus       308 SlGv~l~elltg-~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  386 (433)
                      ||||++|||++| .+||.+.+..+.+......- .                    .                        
T Consensus       221 S~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~-~--------------------~------------------------  255 (299)
T d1ywna1         221 SFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-T--------------------R------------------------  255 (299)
T ss_dssp             HHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHT-C--------------------C------------------------
T ss_pred             ehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC-C--------------------C------------------------
Confidence            999999999986 57887765444332221110 0                    0                        


Q ss_pred             HHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          387 LIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       387 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                        ...++.+++++.+||.+||+.||++|||++|+++|
T Consensus       256 --~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         256 --MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence              01234567889999999999999999999999986

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.1e-50  Score=395.29  Aligned_cols=315  Identities=32%  Similarity=0.508  Sum_probs=239.1

Q ss_pred             ceeecCceec-CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCC------CCCc
Q 013973           87 YMFALGENLT-SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK------GGNR  159 (433)
Q Consensus        87 ~~~~~~~~~~-~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~------~~~~  159 (433)
                      +++.+|+.+. ++|+++++||+|+||+||+|+++.+|+.||||+++......+....|+.+++.+.+...      .++|
T Consensus         2 ~p~~~g~~~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~   81 (362)
T d1q8ya_           2 HPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANH   81 (362)
T ss_dssp             CCCCTTCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTT
T ss_pred             CCCCCCCCccCCcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCc
Confidence            4456778776 47999999999999999999999999999999998766666778889999999976542      3578


Q ss_pred             eEEecceeec--CCeEEEEEecC--CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCceEeec
Q 013973          160 CVQIRNWFDY--RNHICIVFEKL--GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD-LCMIHTDLKPENVLLVS  234 (433)
Q Consensus       160 i~~~~~~~~~--~~~~~lV~e~~--~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~-~~ivHrDlKp~NILl~~  234 (433)
                      |+++++++..  ....++||+++  +++............+++..++.++.||+.||+|||+ .|||||||||+|||++.
T Consensus        82 iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~  161 (362)
T d1q8ya_          82 ILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEI  161 (362)
T ss_dssp             BCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEE
T ss_pred             eEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeec
Confidence            9999988754  35666677665  5566666666666789999999999999999999998 89999999999999976


Q ss_pred             cCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHH
Q 013973          235 SEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILV  314 (433)
Q Consensus       235 ~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~  314 (433)
                      ++..                     .....++++|||.+..........+||+.|+|||++.+..|+.++|+||+||+++
T Consensus       162 ~~~~---------------------~~~~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~  220 (362)
T d1q8ya_         162 VDSP---------------------ENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIF  220 (362)
T ss_dssp             EETT---------------------TTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHH
T ss_pred             cCcc---------------------cccceeeEeecccccccccccccccccccccChhhccccCCCccccccchHHHHH
Confidence            5420                     1223589999999887666666778999999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCC------hHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHH
Q 013973          315 ELCTGEALFQTHE------NLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLI  388 (433)
Q Consensus       315 elltg~~Pf~~~~------~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (433)
                      +|++|+.||...+      ..+.+..+...+|..|.++..........+...+....-......       .........
T Consensus       221 el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~  293 (362)
T d1q8ya_         221 ELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFW-------PLEDVLTEK  293 (362)
T ss_dssp             HHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBC-------CHHHHHHHT
T ss_pred             HHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCC-------chhhhcccc
Confidence            9999999997543      345677788899999988876654443333222211111100000       001111111


Q ss_pred             hhhcCCchhHHHHHHHhccccCCCCCCCHHHHhcCCCCCCC
Q 013973          389 MQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALRHPFFTRD  429 (433)
Q Consensus       389 ~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~hp~f~~~  429 (433)
                      .......++++.|||.+||++||++||||+|+|+||||++.
T Consensus       294 ~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~  334 (362)
T d1q8ya_         294 YKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT  334 (362)
T ss_dssp             TCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred             cccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCC
Confidence            22334567889999999999999999999999999999854

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-51  Score=386.66  Aligned_cols=246  Identities=24%  Similarity=0.316  Sum_probs=193.1

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCC---eEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERK---EMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~---~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      .++|++.+.||+|+||.||+|++..++   ..||||.++..  ....+.+..|+.+++++     +||||+++++++. .
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l-----~HpnIv~l~~~~~-~   79 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-----DHPHIVKLIGVIT-E   79 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEEC-S
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEe-c
Confidence            468999999999999999999987553   56899988642  33456678899999888     7799999999986 4


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      +.+|+||||+ +|+|.+++.... ..+++..++.++.||+.||+|||++|||||||||+|||+++++.+||+|||     
T Consensus        80 ~~~~iv~E~~~~g~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG-----  153 (273)
T d1mp8a_          80 NPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG-----  153 (273)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred             CeEEEEEEeccCCcHHhhhhccC-CCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccch-----
Confidence            6789999999 899999877654 479999999999999999999999999999999999999766655555555     


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCC----CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPD----QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQ  324 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~  324 (433)
                                            +++.....    .....||+.|+|||++.+..|+.++|||||||++|||++ |.+||.
T Consensus       154 ----------------------~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~  211 (273)
T d1mp8a_         154 ----------------------LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ  211 (273)
T ss_dssp             ---------------------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred             ----------------------hheeccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCC
Confidence                                  44332211    123468999999999999999999999999999999998 899998


Q ss_pred             CCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHH
Q 013973          325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  404 (433)
Q Consensus       325 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  404 (433)
                      +.+..+....+...  .                    ..                          +.+..+++++.+||.
T Consensus       212 ~~~~~~~~~~i~~~--~--------------------~~--------------------------~~~~~~~~~~~~li~  243 (273)
T d1mp8a_         212 GVKNNDVIGRIENG--E--------------------RL--------------------------PMPPNCPPTLYSLMT  243 (273)
T ss_dssp             TCCGGGHHHHHHTT--C--------------------CC--------------------------CCCTTCCHHHHHHHH
T ss_pred             CCCHHHHHHHHHcC--C--------------------CC--------------------------CCCCCCCHHHHHHHH
Confidence            87765554432210  0                    00                          123466789999999


Q ss_pred             hccccCCCCCCCHHHHhcC
Q 013973          405 GLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       405 ~~L~~dP~~R~ta~ell~h  423 (433)
                      +||+.||++|||+.||++|
T Consensus       244 ~cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         244 KCWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             HHTCSSGGGSCCHHHHHHH
T ss_pred             HHcCCCHhHCcCHHHHHHH
Confidence            9999999999999999875

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9e-52  Score=383.98  Aligned_cols=245  Identities=23%  Similarity=0.332  Sum_probs=193.7

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEeccee-ecCCeEE
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWF-DYRNHIC  174 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~-~~~~~~~  174 (433)
                      .++|++++.||+|+||.||+|.++  |..||||+++.. ...+.+.+|+++++++     .|+||+++++++ +..+.+|
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~i~~~-~~~~~~~~E~~~l~~l-----~HpnIv~~~g~~~~~~~~~~   77 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-ATAQAFLAEASVMTQL-----RHSNLVQLLGVIVEEKGGLY   77 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCC-C--HHHHHTHHHHTTC-----CCTTBCCEEEEECCC--CCE
T ss_pred             HHHeEEeEEEecCCCeEEEEEEEC--CeEEEEEEECcH-HHHHHHHHHHHHHHhC-----CCCCEeeEEEEEEecCCcEE
Confidence            367999999999999999999984  678999999753 4456788899999887     679999999987 4456789


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCC
Q 013973          175 IVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDS  253 (433)
Q Consensus       175 lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~  253 (433)
                      +||||+ +|+|.++|.+.....+++..++.++.||+.||.|||+.+||||||||+|||+                     
T Consensus        78 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~---------------------  136 (262)
T d1byga_          78 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---------------------  136 (262)
T ss_dssp             EEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---------------------
T ss_pred             EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhhee---------------------
Confidence            999999 9999999987554469999999999999999999999999999999999999                     


Q ss_pred             cccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 013973          254 SYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALFQTHENLEHL  332 (433)
Q Consensus       254 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf~~~~~~~~~  332 (433)
                            +.++.+||+|||+++..........+|..|+|||++.+..++.++|||||||++|||+| |++||...+..+..
T Consensus       137 ------~~~~~~kl~dfg~s~~~~~~~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~  210 (262)
T d1byga_         137 ------SEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV  210 (262)
T ss_dssp             ------CTTSCEEECCCCC------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHH
T ss_pred             ------cCCCCEeecccccceecCCCCccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHH
Confidence                  44556777777877765555556678999999999999999999999999999999998 78999876655444


Q ss_pred             HHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCCC
Q 013973          333 AMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPT  412 (433)
Q Consensus       333 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  412 (433)
                      ..+.                       .+.                         ..+.+..+++++.+||.+||+.||.
T Consensus       211 ~~i~-----------------------~~~-------------------------~~~~~~~~~~~~~~li~~cl~~dP~  242 (262)
T d1byga_         211 PRVE-----------------------KGY-------------------------KMDAPDGCPPAVYEVMKNCWHLDAA  242 (262)
T ss_dssp             HHHT-----------------------TTC-------------------------CCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             HHHH-----------------------cCC-------------------------CCCCCccCCHHHHHHHHHHcccCHh
Confidence            3321                       110                         0012345677899999999999999


Q ss_pred             CCCCHHHHhcC
Q 013973          413 DRLTAREALRH  423 (433)
Q Consensus       413 ~R~ta~ell~h  423 (433)
                      +|||+.|++++
T Consensus       243 ~Rps~~~l~~~  253 (262)
T d1byga_         243 MRPSFLQLREQ  253 (262)
T ss_dssp             GSCCHHHHHHH
T ss_pred             HCcCHHHHHHH
Confidence            99999999874

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.3e-51  Score=388.61  Aligned_cols=245  Identities=21%  Similarity=0.279  Sum_probs=192.7

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCe----EEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKE----MVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~----~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      .+|+++++||+|+||+||+|.+..+|+    .||+|.++..  ....+.+.+|+.+++++     +||||+++++++.++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~HpnIv~l~g~~~~~   83 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-----DNPHVCRLLGICLTS   83 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHC-----CCTTBCCEEEEEESS
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhC-----CCCCEeeEEEEEecC
Confidence            469999999999999999999988876    4788887532  33456788999999998     679999999999875


Q ss_pred             CeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCC
Q 013973          171 NHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHT  249 (433)
Q Consensus       171 ~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~  249 (433)
                      . .++|||++ +++|.+++.... ..+++..++.++.||+.||+|||++|||||||||+|||++.+++            
T Consensus        84 ~-~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~------------  149 (317)
T d1xkka_          84 T-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH------------  149 (317)
T ss_dssp             S-EEEEEECCTTCBHHHHHHHTS-SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTE------------
T ss_pred             C-eeEEEEeccCCcccccccccc-cCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCC------------
Confidence            4 56667776 999999887654 57999999999999999999999999999999999999976555            


Q ss_pred             CCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCC
Q 013973          250 PKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEALF  323 (433)
Q Consensus       250 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~Pf  323 (433)
                                     +||+|||+++......     ....||+.|||||++.+..|+.++|||||||++|||+| |.+||
T Consensus       150 ---------------~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~  214 (317)
T d1xkka_         150 ---------------VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY  214 (317)
T ss_dssp             ---------------EEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             ---------------eEeeccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCC
Confidence                           5555555554332211     22368999999999999999999999999999999998 89999


Q ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHH
Q 013973          324 QTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLL  403 (433)
Q Consensus       324 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  403 (433)
                      .+.+..+....+....                      .+                          ..++.++.++.+||
T Consensus       215 ~~~~~~~~~~~i~~~~----------------------~~--------------------------~~p~~~~~~~~~li  246 (317)
T d1xkka_         215 DGIPASEISSILEKGE----------------------RL--------------------------PQPPICTIDVYMIM  246 (317)
T ss_dssp             TTSCGGGHHHHHHHTC----------------------CC--------------------------CCCTTBCHHHHHHH
T ss_pred             CCCCHHHHHHHHHcCC----------------------CC--------------------------CCCcccCHHHHHHH
Confidence            8776555443322110                      01                          11235678899999


Q ss_pred             HhccccCCCCCCCHHHHhcC
Q 013973          404 QGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       404 ~~~L~~dP~~R~ta~ell~h  423 (433)
                      .+||+.||++|||+.|+++|
T Consensus       247 ~~cl~~dP~~RPs~~eil~~  266 (317)
T d1xkka_         247 VKCWMIDADSRPKFRELIIE  266 (317)
T ss_dssp             HHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhCCCChhhCcCHHHHHHH
Confidence            99999999999999999987

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.7e-50  Score=381.24  Aligned_cols=261  Identities=24%  Similarity=0.313  Sum_probs=202.6

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      +.++|++++.||+|+||+||+|+++.+|+.||||++.... ....+..|+++++.+.+    +++|+.+..++.+.+..+
T Consensus         5 vg~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~i~~~l~~----~~~i~~~~~~~~~~~~~~   79 (299)
T d1ckia_           5 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQG----GVGIPTIRWCGAEGDYNV   79 (299)
T ss_dssp             ETTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT-TSCCHHHHHHHHHHSTT----STTCCCEEEEEEETTEEE
T ss_pred             ECCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc-cCHHHHHHHHHHHHccC----CCcccEEEEEEecCCEEE
Confidence            3467999999999999999999999999999999987433 33457789999988843    345777777888899999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          175 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       175 lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      +||||++++|.+.+.... ..+++..+..++.|++.||+|||++|||||||||+|||++..                   
T Consensus        80 ivme~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~-------------------  139 (299)
T d1ckia_          80 MVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLG-------------------  139 (299)
T ss_dssp             EEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCG-------------------
T ss_pred             EEEEEcCCchhhhhhhcc-CCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhcccccc-------------------
Confidence            999999999988876544 479999999999999999999999999999999999998543                   


Q ss_pred             ccccCCCCCCEEEEecCCccccCCC----------CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPD----------QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                           +.+..+||+|||+|+.....          ....+||+.|||||++.+..|+.++|||||||++|||++|..||.
T Consensus       140 -----~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~  214 (299)
T d1ckia_         140 -----KKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ  214 (299)
T ss_dssp             -----GGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             -----CCCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCccc
Confidence                 23456777888877654322          133579999999999999999999999999999999999999998


Q ss_pred             CCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHH
Q 013973          325 THENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQ  404 (433)
Q Consensus       325 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  404 (433)
                      .....+....+.....                                         .............+++++.+||.
T Consensus       215 ~~~~~~~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~~~p~~~~~li~  253 (299)
T d1ckia_         215 GLKAATKRQKYERISE-----------------------------------------KKMSTPIEVLCKGYPSEFATYLN  253 (299)
T ss_dssp             CCC-------HHHHHH-----------------------------------------HHHHSCHHHHTTTSCHHHHHHHH
T ss_pred             ccchHHHHHHHHHhhc-----------------------------------------ccCCCChhHhccCCCHHHHHHHH
Confidence            7655443322211100                                         00000111223467889999999


Q ss_pred             hccccCCCCCCCHH---HHhcCCCC
Q 013973          405 GLLRYDPTDRLTAR---EALRHPFF  426 (433)
Q Consensus       405 ~~L~~dP~~R~ta~---ell~hp~f  426 (433)
                      .||+.||++||+++   ++|+|+|.
T Consensus       254 ~cl~~~p~~RP~~~~i~~~l~~~~~  278 (299)
T d1ckia_         254 FCRSLRFDDKPDYSYLRQLFRNLFH  278 (299)
T ss_dssp             HHHHSCTTCCCCHHHHHHHHHHHHH
T ss_pred             HHccCChhHCcCHHHHHHHHHHHHH
Confidence            99999999999986   55777654

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.6e-50  Score=382.42  Aligned_cols=247  Identities=21%  Similarity=0.318  Sum_probs=200.1

Q ss_pred             cCcEEEEeeeeccccEEEEEEEEC-----CCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDR-----ERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~-----~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      .++|++++.||+|+||+||+|+.+     .+++.||||+++..  ....+.+.+|+.+++++     .|+|++.+++++.
T Consensus        12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l-----~h~niv~~~~~~~   86 (301)
T d1lufa_          12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-----DNPNIVKLLGVCA   86 (301)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC-----CCTTBCCEEEEEC
T ss_pred             HHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhc-----CCCCcccceeeec
Confidence            567999999999999999999875     35688999998642  33456788999999888     6799999999999


Q ss_pred             cCCeEEEEEecC-CCCHHHHHHhcC----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 013973          169 YRNHICIVFEKL-GSSLYDFLRKNN----------------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDL  225 (433)
Q Consensus       169 ~~~~~~lV~e~~-~~~L~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDl  225 (433)
                      ..+..++||||+ +|+|.++|....                      ...+++..+..++.||+.||+|||+++||||||
T Consensus        87 ~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDl  166 (301)
T d1lufa_          87 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDL  166 (301)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEE
Confidence            999999999999 999999997532                      124889999999999999999999999999999


Q ss_pred             CCCceEeeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhCCCC
Q 013973          226 KPENVLLVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGW  300 (433)
Q Consensus       226 Kp~NILl~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~  300 (433)
                      ||+|||++.+                           +.+||+|||+++.....     .....||+.|+|||++.+..|
T Consensus       167 Kp~NILld~~---------------------------~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  219 (301)
T d1lufa_         167 ATRNCLVGEN---------------------------MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRY  219 (301)
T ss_dssp             SGGGEEECGG---------------------------GCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCC
T ss_pred             cccceEECCC---------------------------CcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCC
Confidence            9999999554                           45666666666432221     123478999999999999999


Q ss_pred             CCcchhHHHHHHHHHHHhCC-CCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhc
Q 013973          301 TYPCDIWSVGCILVELCTGE-ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVM  379 (433)
Q Consensus       301 ~~~~DvwSlGv~l~elltg~-~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (433)
                      +.++|||||||++|||++|. +||.+.+..+....+..                       +..                
T Consensus       220 t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~-----------------------~~~----------------  260 (301)
T d1lufa_         220 TTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRD-----------------------GNI----------------  260 (301)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT-----------------------TCC----------------
T ss_pred             ChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHHc-----------------------CCC----------------
Confidence            99999999999999999985 68888777665543221                       110                


Q ss_pred             cchhHHHHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhc
Q 013973          380 KLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                               ...+..+++++.+||.+||+.||++|||+.||++
T Consensus       261 ---------~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~  294 (301)
T d1lufa_         261 ---------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHR  294 (301)
T ss_dssp             ---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                     0112356788999999999999999999999965

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.7e-50  Score=378.38  Aligned_cols=248  Identities=20%  Similarity=0.307  Sum_probs=194.4

Q ss_pred             cCcEEEEeeeeccccEEEEEEEECCCC-------eEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecce
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWDRERK-------EMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  166 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~~~~~-------~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~  166 (433)
                      .++|++.+.||+|+||.||+|+...++       ..||||+++..  ......+..|...+.++.    .|+||++++++
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~----~HpnIv~~~~~   87 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG----KHKNIINLLGA   87 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHC----CCTTBCCEEEE
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhc----CCCeEEecccc
Confidence            467999999999999999999876554       47999999643  234466677888877773    56899999999


Q ss_pred             eecCCeEEEEEecC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceE
Q 013973          167 FDYRNHICIVFEKL-GSSLYDFLRKNN--------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVL  231 (433)
Q Consensus       167 ~~~~~~~~lV~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NIL  231 (433)
                      +.+++.+++||||+ +|+|.++|....              ...+++.+++.++.||+.||+|||+++||||||||+|||
T Consensus        88 ~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiL  167 (299)
T d1fgka_          88 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL  167 (299)
T ss_dssp             ECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             cccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeeccccee
Confidence            99999999999999 999999997553              235899999999999999999999999999999999999


Q ss_pred             eeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC-----CCceeecCcccchhhhhCCCCCCcchh
Q 013973          232 LVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-----QNYIVSTRHYRAPEVILGLGWTYPCDI  306 (433)
Q Consensus       232 l~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Dv  306 (433)
                      ++.++                           .+||+|||++......     ....+||+.|+|||++.+..|+.++||
T Consensus       168 l~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~Di  220 (299)
T d1fgka_         168 VTEDN---------------------------VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV  220 (299)
T ss_dssp             ECTTC---------------------------CEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHH
T ss_pred             ecCCC---------------------------CeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhh
Confidence            95544                           5555555555433222     123478999999999999999999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHH
Q 013973          307 WSVGCILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQ  385 (433)
Q Consensus       307 wSlGv~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (433)
                      |||||++|||++ |.+||.+.+..+.+..+...  .                    .+.                     
T Consensus       221 wS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~--~--------------------~~~---------------------  257 (299)
T d1fgka_         221 WSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG--H--------------------RMD---------------------  257 (299)
T ss_dssp             HHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT--C--------------------CCC---------------------
T ss_pred             HHhHHHHHHhccCCCCCCCCCCHHHHHHHHHcC--C--------------------CCC---------------------
Confidence            999999999998 79999877765544332210  0                    111                     


Q ss_pred             HHHhhhcCCchhHHHHHHHhccccCCCCCCCHHHHhc
Q 013973          386 NLIMQHVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       386 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                           .+..+++++.+||.+||+.||++|||+.||++
T Consensus       258 -----~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         258 -----KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             -----CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----CCccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence                 12356788999999999999999999999986

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-50  Score=377.06  Aligned_cols=245  Identities=21%  Similarity=0.268  Sum_probs=188.6

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCC-C--eEEEEEEeecc----hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeec
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRER-K--EMVAIKIVRGI----KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDY  169 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~-~--~~vAiK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~  169 (433)
                      ++|++++.||+|+||.||+|+.... +  ..||||+++..    ....+.+.+|+.+++++     +|+||+++++++.+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l-----~H~nIv~~~g~~~~   82 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-----DHRNLIRLYGVVLT   82 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-----CCTTBCCEEEEECS
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhC-----CCCCEEEEEEEEee
Confidence            5699999999999999999986433 2  46899988632    23345678899999998     67999999999976


Q ss_pred             CCeEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCC
Q 013973          170 RNHICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLH  248 (433)
Q Consensus       170 ~~~~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~  248 (433)
                       ..+++||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.           
T Consensus        83 -~~~~lv~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~-----------  149 (273)
T d1u46a_          83 -PPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL-----------  149 (273)
T ss_dssp             -SSCEEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTE-----------
T ss_pred             -cchheeeeeecCcchhhhhhccc-CCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccc-----------
Confidence             4678999999 899998877653 36999999999999999999999999999999999999976555           


Q ss_pred             CCCCCcccccCCCCCCEEEEecCCccccCCCC------CceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCC
Q 013973          249 TPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ------NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCT-GEA  321 (433)
Q Consensus       249 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~ellt-g~~  321 (433)
                                      +||+|||+++......      ....||..|+|||++.+..++.++|||||||++|||+| |..
T Consensus       150 ----------------vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~  213 (273)
T d1u46a_         150 ----------------VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE  213 (273)
T ss_dssp             ----------------EEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ----------------eeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCC
Confidence                            4555555554332221      22367889999999999999999999999999999998 899


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          322 LFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       322 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      ||.+.+..+....+......                     +                          +.++.++.++.+
T Consensus       214 Pf~~~~~~~~~~~i~~~~~~---------------------~--------------------------~~~~~~~~~l~~  246 (273)
T d1u46a_         214 PWIGLNGSQILHKIDKEGER---------------------L--------------------------PRPEDCPQDIYN  246 (273)
T ss_dssp             TTTTCCHHHHHHHHHTSCCC---------------------C--------------------------CCCTTCCHHHHH
T ss_pred             CCCCcCHHHHHHHHHhCCCC---------------------C--------------------------CCcccccHHHHH
Confidence            99988877765543221000                     0                          112356778999


Q ss_pred             HHHhccccCCCCCCCHHHHhc
Q 013973          402 LLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       402 li~~~L~~dP~~R~ta~ell~  422 (433)
                      ||.+||+.||++|||+.||++
T Consensus       247 li~~cl~~dp~~RPt~~ei~~  267 (273)
T d1u46a_         247 VMVQCWAHKPEDRPTFVALRD  267 (273)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHcCCChhHCcCHHHHHH
Confidence            999999999999999999863

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=3.7e-49  Score=372.92  Aligned_cols=255  Identities=19%  Similarity=0.242  Sum_probs=202.0

Q ss_pred             ecCcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEE
Q 013973           95 LTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHIC  174 (433)
Q Consensus        95 ~~~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~  174 (433)
                      +.++|++++.||+|+||+||+|++..+|+.||||++.... ....+..|+++++.+.+    +++++.+++++......+
T Consensus         3 ig~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~e~~~~~~l~~----~~~i~~~~~~~~~~~~~~   77 (293)
T d1csna_           3 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAG----CTGIPNVYYFGQEGLHNV   77 (293)
T ss_dssp             ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTT----CTTCCCEEEEEEETTEEE
T ss_pred             CCCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc-CcHHHHHHHHHHHHhcC----CCCCCEEEEEeecCCccE
Confidence            4578999999999999999999999999999999986432 33456778888888854    356888888999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCCCc
Q 013973          175 IVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKDSS  254 (433)
Q Consensus       175 lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~~~  254 (433)
                      +||||++++|.+++...+ ..+++..+..++.|++.||+|||++|||||||||+|||++....                 
T Consensus        78 ~vme~~~~~l~~~~~~~~-~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~-----------------  139 (293)
T d1csna_          78 LVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNS-----------------  139 (293)
T ss_dssp             EEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSS-----------------
T ss_pred             EEEEecCCCHHHHHHhhc-cchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCccc-----------------
Confidence            999999999999987654 47999999999999999999999999999999999999964221                 


Q ss_pred             ccccCCCCCCEEEEecCCccccCCC----------CCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 013973          255 YFKRMPKSSAIKVIDFGSTTYERPD----------QNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQ  324 (433)
Q Consensus       255 ~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~  324 (433)
                           ...+.+||+|||+|+.....          ....+||+.|||||++.+..++.++|||||||++|||++|..||.
T Consensus       140 -----~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~  214 (293)
T d1csna_         140 -----KNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQ  214 (293)
T ss_dssp             -----TTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTS
T ss_pred             -----ccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCC
Confidence                 23456888888887654321          233579999999999999999999999999999999999999997


Q ss_pred             CCChH---HHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHH
Q 013973          325 THENL---EHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTH  401 (433)
Q Consensus       325 ~~~~~---~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (433)
                      +....   +....+.......                                            ...+....+++++.+
T Consensus       215 ~~~~~~~~~~~~~i~~~~~~~--------------------------------------------~~~~l~~~~p~~l~~  250 (293)
T d1csna_         215 GLKAATNKQKYERIGEKKQST--------------------------------------------PLRELCAGFPEEFYK  250 (293)
T ss_dssp             SCCSCCHHHHHHHHHHHHHHS--------------------------------------------CHHHHTTTSCHHHHH
T ss_pred             CccchhHHHHHHHHHhccCCC--------------------------------------------ChHHhcCCCCHHHHH
Confidence            64432   2222111100000                                            011122456788999


Q ss_pred             HHHhccccCCCCCCCHHHHh
Q 013973          402 LLQGLLRYDPTDRLTAREAL  421 (433)
Q Consensus       402 li~~~L~~dP~~R~ta~ell  421 (433)
                      ++..|+..+|++||+.+.+.
T Consensus       251 ii~~~~~~~~~~rP~y~~l~  270 (293)
T d1csna_         251 YMHYARNLAFDATPDYDYLQ  270 (293)
T ss_dssp             HHHHHHHCCTTCCCCHHHHH
T ss_pred             HHHHHhcCCcccCcCHHHHH
Confidence            99999999999999876553

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-50  Score=381.76  Aligned_cols=248  Identities=22%  Similarity=0.274  Sum_probs=197.1

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeE--EEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCe
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEM--VAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNH  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~--vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~  172 (433)
                      ++|++.+.||+|+||+||+|+++.++..  ||||.++..  ....+.+.+|++++.++.    +|+||+++++++.+.+.
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~----~HpnIv~~~~~~~~~~~   85 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG----HHPNIINLLGACEHRGY   85 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCC----CCTTBCCEEEEEEETTE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhcc----CCCCEeeEEEEEecCCe
Confidence            5799999999999999999999888874  677777532  234456788999888762    47899999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhc--------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCc
Q 013973          173 ICIVFEKL-GSSLYDFLRKN--------------NYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEY  237 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~--------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~  237 (433)
                      +++||||+ +|+|.++|+..              ....+++..+..++.||+.||.|||+++||||||||+|||++.+  
T Consensus        86 ~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~--  163 (309)
T d1fvra_          86 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN--  163 (309)
T ss_dssp             EEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGG--
T ss_pred             eEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCC--
Confidence            99999999 99999999754              23579999999999999999999999999999999999999554  


Q ss_pred             cccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC--CceeecCcccchhhhhCCCCCCcchhHHHHHHHHH
Q 013973          238 IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ--NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVE  315 (433)
Q Consensus       238 ~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~e  315 (433)
                                               +.+||+|||+++......  ....||..|+|||.+.+..|+.++|||||||++||
T Consensus       164 -------------------------~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~e  218 (309)
T d1fvra_         164 -------------------------YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE  218 (309)
T ss_dssp             -------------------------GCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred             -------------------------CceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHH
Confidence                                     456666666665333222  23468999999999999999999999999999999


Q ss_pred             HHhCC-CCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCC
Q 013973          316 LCTGE-ALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDH  394 (433)
Q Consensus       316 lltg~-~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (433)
                      |++|. +||.+.+..+....+..                      ....                          ..+..
T Consensus       219 ll~~~~~p~~~~~~~~~~~~i~~----------------------~~~~--------------------------~~~~~  250 (309)
T d1fvra_         219 IVSLGGTPYCGMTCAELYEKLPQ----------------------GYRL--------------------------EKPLN  250 (309)
T ss_dssp             HHTTSCCTTTTCCHHHHHHHGGG----------------------TCCC--------------------------CCCTT
T ss_pred             HHhcCCCCCCCCCHHHHHHHHHh----------------------cCCC--------------------------CCCcc
Confidence            99965 67887766554433211                      0011                          11235


Q ss_pred             chhHHHHHHHhccccCCCCCCCHHHHhcC
Q 013973          395 SAGDLTHLLQGLLRYDPTDRLTAREALRH  423 (433)
Q Consensus       395 ~~~~~~~li~~~L~~dP~~R~ta~ell~h  423 (433)
                      +++++.+||.+||+.||++|||+.||++|
T Consensus       251 ~~~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         251 CDDEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             BCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            67899999999999999999999999986

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-49  Score=374.68  Aligned_cols=254  Identities=23%  Similarity=0.345  Sum_probs=199.2

Q ss_pred             cCcEEEEeeeeccccEEEEEEEE-----CCCCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee
Q 013973           96 TSRYKIHSKMGEGTFGQVLECWD-----RERKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD  168 (433)
Q Consensus        96 ~~~~~~~~~iG~G~~g~V~~~~~-----~~~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~  168 (433)
                      .++|++.+.||+|+||.||+|++     ..+++.||||+++..  ......+..|+.+++++.    +|+||+++++++.
T Consensus        22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~----~HpnIv~~~g~~~   97 (311)
T d1t46a_          22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG----NHMNIVNLLGACT   97 (311)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC----CCTTBCCEEEEEC
T ss_pred             HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhcc----CCCCEEEEEEEEe
Confidence            46899999999999999999986     356788999999743  334556778999998883    5789999999999


Q ss_pred             cCCeEEEEEecC-CCCHHHHHHhcC----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceE
Q 013973          169 YRNHICIVFEKL-GSSLYDFLRKNN----------------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVL  231 (433)
Q Consensus       169 ~~~~~~lV~e~~-~~~L~~~l~~~~----------------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NIL  231 (433)
                      +.+.+++||||| +|+|.++|+...                ...+++..+..++.||+.||+|||++|||||||||+|||
T Consensus        98 ~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl  177 (311)
T d1t46a_          98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNIL  177 (311)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             eCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeeccccccccc
Confidence            999999999999 899999997643                235899999999999999999999999999999999999


Q ss_pred             eeccCccccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHH
Q 013973          232 LVSSEYIKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGC  311 (433)
Q Consensus       232 l~~~~~~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv  311 (433)
                      ++.++.++++|||.+.........         .             .....+||+.|+|||++.+..++.++|||||||
T Consensus       178 ~~~~~~~ki~DfG~~~~~~~~~~~---------~-------------~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~  235 (311)
T d1t46a_         178 LTHGRITKICDFGLARDIKNDSNY---------V-------------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGI  235 (311)
T ss_dssp             EETTTEEEECCCGGGSCTTSCTTS---------E-------------ECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred             ccccCcccccccchheeccCCCcc---------e-------------EeeecccChHHcCHHHhcCCCCCCcccccchHH
Confidence            976665555555554433211100         0             012247899999999999999999999999999


Q ss_pred             HHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhh
Q 013973          312 ILVELCT-GEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQ  390 (433)
Q Consensus       312 ~l~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (433)
                      ++|||+| |.+||.+.+..+.+..+...-..                                               ..
T Consensus       236 ~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~-----------------------------------------------~~  268 (311)
T d1t46a_         236 FLWELFSLGSSPYPGMPVDSKFYKMIKEGFR-----------------------------------------------ML  268 (311)
T ss_dssp             HHHHHHTTTCCSSTTCCSSHHHHHHHHHTCC-----------------------------------------------CC
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHhcCCC-----------------------------------------------CC
Confidence            9999998 67777766554443332211000                                               00


Q ss_pred             hcCCchhHHHHHHHhccccCCCCCCCHHHHhc
Q 013973          391 HVDHSAGDLTHLLQGLLRYDPTDRLTAREALR  422 (433)
Q Consensus       391 ~~~~~~~~~~~li~~~L~~dP~~R~ta~ell~  422 (433)
                      .+...+.++.+||.+||+.||++|||++||++
T Consensus       269 ~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         269 SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            12356778999999999999999999999985

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-49  Score=377.01  Aligned_cols=255  Identities=22%  Similarity=0.325  Sum_probs=205.4

Q ss_pred             eecCcEEEEeeeeccccEEEEEEEECC-----CCeEEEEEEeecc--hhhHHHHHHHHHHHHHHHhcCCCCCceEEecce
Q 013973           94 NLTSRYKIHSKMGEGTFGQVLECWDRE-----RKEMVAIKIVRGI--KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNW  166 (433)
Q Consensus        94 ~~~~~~~~~~~iG~G~~g~V~~~~~~~-----~~~~vAiK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~  166 (433)
                      ...++|++.+.||+|+||+||+|.++.     ++..||||+++..  ......+.+|+.+++++     +|+||+++++.
T Consensus        17 i~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l-----~h~nIv~~~~~   91 (308)
T d1p4oa_          17 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-----NCHHVVRLLGV   91 (308)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGC-----CCTTBCCEEEE
T ss_pred             ecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHc-----CCCCEeeeeeE
Confidence            335789999999999999999998752     3578999999743  23334567899988887     77899999999


Q ss_pred             eecCCeEEEEEecC-CCCHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCc
Q 013973          167 FDYRNHICIVFEKL-GSSLYDFLRKNN--------YRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEY  237 (433)
Q Consensus       167 ~~~~~~~~lV~e~~-~~~L~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~  237 (433)
                      +......++||||+ +|+|.+++....        ...+++..+..++.|++.||.|||+++||||||||+|||++    
T Consensus        92 ~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld----  167 (308)
T d1p4oa_          92 VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA----  167 (308)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEEC----
T ss_pred             EecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeec----
Confidence            99999999999999 999999986421        13578999999999999999999999999999999999994    


Q ss_pred             cccCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCC-----CceeecCcccchhhhhCCCCCCcchhHHHHHH
Q 013973          238 IKVPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQ-----NYIVSTRHYRAPEVILGLGWTYPCDIWSVGCI  312 (433)
Q Consensus       238 ~~i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~  312 (433)
                                             .+..+||+|||+++......     ....||+.|+|||.+.+..++.++|||||||+
T Consensus       168 -----------------------~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~i  224 (308)
T d1p4oa_         168 -----------------------EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV  224 (308)
T ss_dssp             -----------------------TTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             -----------------------CCceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHH
Confidence                                   45566666777665433221     22478999999999999999999999999999


Q ss_pred             HHHHHhC-CCCCCCCChHHHHHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhh
Q 013973          313 LVELCTG-EALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQH  391 (433)
Q Consensus       313 l~elltg-~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (433)
                      +|||+|| .+||.+.+..+.+..+...                      ....                          .
T Consensus       225 l~El~t~~~~p~~~~~~~~~~~~i~~~----------------------~~~~--------------------------~  256 (308)
T d1p4oa_         225 LWEIATLAEQPYQGLSNEQVLRFVMEG----------------------GLLD--------------------------K  256 (308)
T ss_dssp             HHHHHHTSCCTTTTSCHHHHHHHHHTT----------------------CCCC--------------------------C
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHhC----------------------CCCC--------------------------C
Confidence            9999998 5888887776655443210                      0001                          1


Q ss_pred             cCCchhHHHHHHHhccccCCCCCCCHHHHhc------CCCCCC
Q 013973          392 VDHSAGDLTHLLQGLLRYDPTDRLTAREALR------HPFFTR  428 (433)
Q Consensus       392 ~~~~~~~~~~li~~~L~~dP~~R~ta~ell~------hp~f~~  428 (433)
                      ++.+++.+.+||.+||+.||++|||+.||++      +|+|++
T Consensus       257 p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~~~~  299 (308)
T d1p4oa_         257 PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE  299 (308)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHH
T ss_pred             cccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCcC
Confidence            2356778999999999999999999999998      777753

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.3e-48  Score=366.22  Aligned_cols=256  Identities=16%  Similarity=0.180  Sum_probs=191.6

Q ss_pred             EEEeeeeccccEEEEEEEECCCC---eEEEEEEeec--chhhHHHHHHHHHHHHHHHhcCCCCCceEEecceee-cCCeE
Q 013973          100 KIHSKMGEGTFGQVLECWDRERK---EMVAIKIVRG--IKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFD-YRNHI  173 (433)
Q Consensus       100 ~~~~~iG~G~~g~V~~~~~~~~~---~~vAiK~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~-~~~~~  173 (433)
                      .+.++||+|+||+||+|++..++   ..||||.++.  .....+.+..|+++++++     .||||+++++++. .++.+
T Consensus        30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l-----~HpnIv~~~g~~~~~~~~~  104 (311)
T d1r0pa_          30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-----SHPNVLSLLGICLRSEGSP  104 (311)
T ss_dssp             EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTC-----CCTTBCCCCEEEEETTTEE
T ss_pred             ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhC-----CCCCEeEEeEEEEecCCce
Confidence            34688999999999999987653   3699999863  344556788999999988     6799999999865 46789


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccccCCCcCCCCCCCC
Q 013973          174 CIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSLHTPKD  252 (433)
Q Consensus       174 ~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~i~dfg~~~~~~~~  252 (433)
                      ++||||| +++|.+++.... ..+++..+..++.|++.||.|||+.+|+||||||+|||+++++.+||+|||++......
T Consensus       105 ~lv~E~~~~g~l~~~~~~~~-~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~  183 (311)
T d1r0pa_         105 LVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK  183 (311)
T ss_dssp             EEEEECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTT
T ss_pred             EEEEEEeecCchhhhhcccc-ccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhcccc
Confidence            9999999 899999987653 46888999999999999999999999999999999999965555444444444322211


Q ss_pred             CcccccCCCCCCEEEEecCCccccCCCCCceeecCcccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCh-HHH
Q 013973          253 SSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHEN-LEH  331 (433)
Q Consensus       253 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGv~l~elltg~~Pf~~~~~-~~~  331 (433)
                      ...                    .........||+.|+|||++.+..++.++||||||+++|||++|..||..... .+.
T Consensus       184 ~~~--------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~  243 (311)
T d1r0pa_         184 EFD--------------------SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI  243 (311)
T ss_dssp             TCC--------------------CTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------C
T ss_pred             ccc--------------------cceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHH
Confidence            000                    00011224689999999999999999999999999999999998777754322 221


Q ss_pred             HHHHHHHhCCCCHHHHHHHhhhhhhhhccCcccCCCCccchhhHhhhccchhHHHHHhhhcCCchhHHHHHHHhccccCC
Q 013973          332 LAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGAASRESIKSVMKLPRLQNLIMQHVDHSAGDLTHLLQGLLRYDP  411 (433)
Q Consensus       332 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  411 (433)
                      ...+                       ..|..                         ...++.+++++.+||.+||+.||
T Consensus       244 ~~~i-----------------------~~g~~-------------------------~~~p~~~~~~l~~li~~cl~~dP  275 (311)
T d1r0pa_         244 TVYL-----------------------LQGRR-------------------------LLQPEYCPDPLYEVMLKCWHPKA  275 (311)
T ss_dssp             HHHH-----------------------HTTCC-------------------------CCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             HHHH-----------------------HcCCC-------------------------CCCcccCcHHHHHHHHHHcCCCH
Confidence            1111                       11110                         01123567789999999999999


Q ss_pred             CCCCCHHHHhcC------CCCCCC
Q 013973          412 TDRLTAREALRH------PFFTRD  429 (433)
Q Consensus       412 ~~R~ta~ell~h------p~f~~~  429 (433)
                      ++|||+.||++|      .|..+.
T Consensus       276 ~~RPs~~ei~~~L~~i~~~~~~~~  299 (311)
T d1r0pa_         276 EMRPSFSELVSRISAIFSTFIGEH  299 (311)
T ss_dssp             GGSCCHHHHHHHHHHHHHTCCSCC
T ss_pred             hHCcCHHHHHHHHHHHHHhhhhhh
Confidence            999999999998      666654

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-48  Score=369.49  Aligned_cols=192  Identities=22%  Similarity=0.295  Sum_probs=152.6

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCC----e
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRN----H  172 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~----~  172 (433)
                      .+|.+.+.||+|+||.||+|+.  +|+.||||+++...  ......|.+++...   ..+|+||+++++++.+.+    .
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~--~~~~~~e~ei~~~~---~~~HpnIv~~~~~~~~~~~~~~~   75 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE--ERSWFREAEIYQTV---MLRHENILGFIAADNKDNGTWTQ   75 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGG--HHHHHHHHHHHTST---TCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc--hhHHHHHHHHHHHh---hCCCCcCcceEEEEEeCCCcceE
Confidence            5699999999999999999986  67899999997443  23344454444221   126899999999987543    6


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH--------CCceeccCCCCceEeeccCccccCCC
Q 013973          173 ICIVFEKL-GSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHD--------LCMIHTDLKPENVLLVSSEYIKVPDY  243 (433)
Q Consensus       173 ~~lV~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~--------~~ivHrDlKp~NILl~~~~~~~i~df  243 (433)
                      +|+||||+ +|+|.++|++.   .+++..+..++.|++.||.|||+        +|||||||||+||||+.+        
T Consensus        76 ~~lv~Ey~~~g~L~~~l~~~---~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~--------  144 (303)
T d1vjya_          76 LWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN--------  144 (303)
T ss_dssp             EEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTT--------
T ss_pred             EEEEEecccCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCC--------
Confidence            89999999 99999999875   59999999999999999999996        589999999999999554        


Q ss_pred             cCCCCCCCCCcccccCCCCCCEEEEecCCccccCCC-------CCceeecCcccchhhhhCCC------CCCcchhHHHH
Q 013973          244 KSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPD-------QNYIVSTRHYRAPEVILGLG------WTYPCDIWSVG  310 (433)
Q Consensus       244 g~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~------~~~~~DvwSlG  310 (433)
                                         +.+||+|||++......       ....+||+.|||||++.+..      ++.++||||||
T Consensus       145 -------------------~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~G  205 (303)
T d1vjya_         145 -------------------GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG  205 (303)
T ss_dssp             -------------------SCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHH
T ss_pred             -------------------CCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhH
Confidence                               45566666655433221       12357999999999998643      57789999999


Q ss_pred             HHHHHHHhCCCCCCC
Q 013973          311 CILVELCTGEALFQT  325 (433)
Q Consensus       311 v~l~elltg~~Pf~~  325 (433)
                      |++|||+||..||..
T Consensus       206 vvl~el~tg~~~~~~  220 (303)
T d1vjya_         206 LVFWEIARRCSIGGI  220 (303)
T ss_dssp             HHHHHHHHTBCBTTB
T ss_pred             HHHHHHhhCCCCCCc
Confidence            999999999988854

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.92  E-value=2.2e-25  Score=195.75  Aligned_cols=162  Identities=21%  Similarity=0.225  Sum_probs=109.8

Q ss_pred             EEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-------------------hhHHHHHHHHHHHHHHHhcCCCCCc
Q 013973           99 YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-------------------KYREAAMIEIEVLQQLAKHDKGGNR  159 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-------------------~~~~~~~~E~~~l~~l~~~~~~~~~  159 (433)
                      +.+.++||+|+||+||+|.+. +|+.||||+++...                   ........|...+.++     .+.+
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~~~~   75 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL-----QGLA   75 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT-----TTSS
T ss_pred             chhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHc-----cCCC
Confidence            357899999999999999985 68899999875211                   0112233466666666     3344


Q ss_pred             eEEecceeecCCeEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCceEeeccCccc
Q 013973          160 CVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIARQLLECIAFMHDLCMIHTDLKPENVLLVSSEYIK  239 (433)
Q Consensus       160 i~~~~~~~~~~~~~~lV~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlKp~NILl~~~~~~~  239 (433)
                      ++..++...    .++||||+++...        ..++...+..++.|++.||.|||++||+||||||+|||++++    
T Consensus        76 v~~~~~~~~----~~lvme~~~~~~~--------~~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~----  139 (191)
T d1zara2          76 VPKVYAWEG----NAVLMELIDAKEL--------YRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEE----  139 (191)
T ss_dssp             SCCEEEEET----TEEEEECCCCEEG--------GGCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETT----
T ss_pred             cceEEEecC----CEEEEEeeccccc--------cchhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCC----
Confidence            555544321    2799999944311        135566678899999999999999999999999999999532    


Q ss_pred             cCCCcCCCCCCCCCcccccCCCCCCEEEEecCCccccCCCCCceeecCcccch------hhhhCCCCCCcchhHHHHHH
Q 013973          240 VPDYKSSLHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAP------EVILGLGWTYPCDIWSVGCI  312 (433)
Q Consensus       240 i~dfg~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aP------E~~~~~~~~~~~DvwSlGv~  312 (433)
                                              .++|+|||.|........     ..|...      +. ....|+.++|+||+.--
T Consensus       140 ------------------------~~~liDFG~a~~~~~~~~-----~~~l~rd~~~~~~~-f~r~y~~~~d~~s~~~~  188 (191)
T d1zara2         140 ------------------------GIWIIDFPQSVEVGEEGW-----REILERDVRNIITY-FSRTYRTEKDINSAIDR  188 (191)
T ss_dssp             ------------------------EEEECCCTTCEETTSTTH-----HHHHHHHHHHHHHH-HHHHHCCCCCHHHHHHH
T ss_pred             ------------------------CEEEEECCCcccCCCCCc-----HHHHHHHHHHHHHH-HcCCCCCcccHHHHHHH
Confidence                                    378888888765432221     011111      11 13568899999997543

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.32  E-value=8.6e-07  Score=79.21  Aligned_cols=84  Identities=8%  Similarity=0.028  Sum_probs=56.2

Q ss_pred             CcEEEEeeeeccccEEEEEEEECCCCeEEEEEEeecch-hhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEE
Q 013973           97 SRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIK-KYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICI  175 (433)
Q Consensus        97 ~~~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~l  175 (433)
                      ..|++++..+-++.+.||+..  .+++.+.+|+..... ........|...+..+.... .   +.+++.+...++..++
T Consensus        14 ~~~~~~~~~~G~s~~~v~rv~--~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~v-p---vP~vl~~~~~~~~~~l   87 (263)
T d1j7la_          14 EKYRCVKDTEGMSPAKVYKLV--GENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKL-P---VPKVLHFERHDGWSNL   87 (263)
T ss_dssp             TTSEEEECSCCCSSSEEEEEE--CSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTS-C---CCCEEEEEEETTEEEE
T ss_pred             hceEEEEcCCCCCCCcEEEEE--eCCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccC-C---CCcEEEEEecCCceEE
Confidence            457777765555567899875  345567888775332 22334567888888885432 1   4566667777889999


Q ss_pred             EEecC-CCCHHH
Q 013973          176 VFEKL-GSSLYD  186 (433)
Q Consensus       176 V~e~~-~~~L~~  186 (433)
                      ||+++ |..+.+
T Consensus        88 v~~~l~G~~~~~   99 (263)
T d1j7la_          88 LMSEADGVLCSE   99 (263)
T ss_dssp             EEECCSSEEHHH
T ss_pred             EEEecccccccc
Confidence            99999 656544

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=98.00  E-value=1.2e-05  Score=76.32  Aligned_cols=76  Identities=20%  Similarity=0.222  Sum_probs=47.4

Q ss_pred             EeeeeccccEEEEEEEECCCCeEEEEEEeecc--------hhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeE
Q 013973          102 HSKMGEGTFGQVLECWDRERKEMVAIKIVRGI--------KKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHI  173 (433)
Q Consensus       102 ~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~--------~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~  173 (433)
                      .+.||.|....||++.+..+++.|++|.-...        .....+...|.+.|+.+.....  ..+++++.+.  ....
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p--~~vP~v~~~d--~~~~  106 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVP--HLVPRVFYSD--TEMA  106 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCG--GGSCCEEEEE--TTTT
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCC--CCcceEEEEc--CCCC
Confidence            56789999999999998888888999975311        1112334568888887765321  2345555443  3345


Q ss_pred             EEEEecCC
Q 013973          174 CIVFEKLG  181 (433)
Q Consensus       174 ~lV~e~~~  181 (433)
                      ++|||+++
T Consensus       107 ~lvmE~L~  114 (392)
T d2pula1         107 VTVMEDLS  114 (392)
T ss_dssp             EEEECCCT
T ss_pred             EEEEeccC
Confidence            78999993

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.75  E-value=2.6e-05  Score=68.75  Aligned_cols=74  Identities=12%  Similarity=0.085  Sum_probs=50.4

Q ss_pred             eeeccc-cEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecCCeEEEEEecC-C
Q 013973          104 KMGEGT-FGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKL-G  181 (433)
Q Consensus       104 ~iG~G~-~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~~~~~lV~e~~-~  181 (433)
                      .+..|. -+.||+... .++..+++|......  ......|...++.+......   +.+++....+.+..++||+++ |
T Consensus        17 ~~~~G~s~~~v~r~~~-~~~~~~vlK~~~~~~--~~~l~~E~~~l~~L~~~gvp---vP~v~~~~~~~~~~~~v~~~i~G   90 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSA-QGRPVLFVKTDLSGA--LNELQDEAARLSWLATTGVP---CAAVLDVVTEAGRDWLLLGEVPG   90 (255)
T ss_dssp             ECSCTTSSCEEEEEEC-TTSCCEEEEEECSCT--TSCHHHHHHHHHHHHTTTCC---BCCEEEEEECSSCEEEEEECCSS
T ss_pred             EcCCcccCCeEEEEEe-CCCCEEEEEeCCccC--HhHHHHHHHHHHHHHhcCCC---CCceeeecccccceEEEEEeeec
Confidence            334444 367998875 455668899876432  33467789999888765432   555666667778899999999 5


Q ss_pred             CC
Q 013973          182 SS  183 (433)
Q Consensus       182 ~~  183 (433)
                      .+
T Consensus        91 ~~   92 (255)
T d1nd4a_          91 QD   92 (255)
T ss_dssp             EE
T ss_pred             cc
Confidence            44

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=97.72  E-value=0.00012  Score=67.13  Aligned_cols=71  Identities=17%  Similarity=0.205  Sum_probs=48.2

Q ss_pred             EEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEec--ceeecCCeEEEEEecCCC
Q 013973          111 GQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIR--NWFDYRNHICIVFEKLGS  182 (433)
Q Consensus       111 g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~--~~~~~~~~~~lV~e~~~~  182 (433)
                      -.||++.. .+|..|++|+.+......+++..|...+..|.......+..+...  ..+...+..+.|+++++|
T Consensus        36 N~vy~v~~-~dg~~~VlK~~rp~~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G  108 (325)
T d1zyla1          36 NRVYQFQD-EDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG  108 (325)
T ss_dssp             SEEEEECC-TTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred             ceeEEEEc-CCCCEEEEEEeCCCCCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCC
Confidence            57999976 456779999987544445667789999999987654333222221  223456778899999843

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.16  E-value=0.00076  Score=63.37  Aligned_cols=73  Identities=14%  Similarity=0.172  Sum_probs=48.6

Q ss_pred             cEEEEeeeeccccEEEEEEEECC-------CCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecceeecC
Q 013973           98 RYKIHSKMGEGTFGQVLECWDRE-------RKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYR  170 (433)
Q Consensus        98 ~~~~~~~iG~G~~g~V~~~~~~~-------~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~~~~~~  170 (433)
                      .+++ +.|+-|-.-.+|++....       ..+.|.+++.-.... .-....|..+++.+..+..    ..++++++.. 
T Consensus        44 ~l~v-~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~~-~idr~~E~~i~~~ls~~gl----~Pkll~~~~~-  116 (395)
T d1nw1a_          44 HLRI-SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET-ESHLVAESVIFTLLSERHL----GPKLYGIFSG-  116 (395)
T ss_dssp             GEEE-EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC-HHHHHHHHHHHHHHHHTTS----SSCEEEEETT-
T ss_pred             ceEE-EEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCcch-hhHHHHHHHHHHHHHhCCC----CCeEEEEcCC-
Confidence            3444 678888889999998653       345688887653322 2335578999998877543    3455555543 


Q ss_pred             CeEEEEEecC
Q 013973          171 NHICIVFEKL  180 (433)
Q Consensus       171 ~~~~lV~e~~  180 (433)
                         .+||||+
T Consensus       117 ---g~I~efi  123 (395)
T d1nw1a_         117 ---GRLEEYI  123 (395)
T ss_dssp             ---EEEECCC
T ss_pred             ---ceEEEEe
Confidence               5889998

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.81  E-value=0.0045  Score=55.74  Aligned_cols=79  Identities=8%  Similarity=0.025  Sum_probs=44.2

Q ss_pred             EEEEeeeeccccEEEEEEEECCCCeEEEEEEeecchhhHHHHHHHHHHHHHHHhcCCCCCceEEecc---eeecCCeEEE
Q 013973           99 YKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRN---WFDYRNHICI  175 (433)
Q Consensus        99 ~~~~~~iG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~i~~~~~---~~~~~~~~~l  175 (433)
                      ..-.+.|..|---+.|+..... |+ |++|++... ...+....|.+++..+..+....|..+....   .....+....
T Consensus        20 ~~~~~~i~~G~~N~ny~v~t~~-g~-yVLri~~~~-~~~~~l~~~~~~l~~L~~~g~pvp~pi~~~~g~~~~~~~~~~~~   96 (316)
T d2ppqa1          20 LTSYKGIAEGVENSNFLLHTTK-DP-LILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAA   96 (316)
T ss_dssp             EEEEEEECC---EEEEEEEESS-CC-EEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEE
T ss_pred             ceEeecCCCCcccCeEEEEECC-Cc-EEEEEcCCC-CCHHHHHHHHHHHHhhhhccccccccceecCCCcceeeecccce
Confidence            4445667778778899987643 43 999998643 2334456688889988876544443322211   1122345566


Q ss_pred             EEecC
Q 013973          176 VFEKL  180 (433)
Q Consensus       176 V~e~~  180 (433)
                      ++.++
T Consensus        97 ~~~~~  101 (316)
T d2ppqa1          97 LISFL  101 (316)
T ss_dssp             EEECC
T ss_pred             eeeec
Confidence            66655