Query 013974
Match_columns 433
No_of_seqs 129 out of 1337
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 03:12:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013974.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013974hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l1l_A Arginine/agmatine antip 99.9 1.6E-18 5.4E-23 171.2 32.9 241 42-289 6-252 (445)
2 3gia_A Uncharacterized protein 99.8 6.7E-16 2.3E-20 152.3 31.0 240 42-288 4-248 (444)
3 4djk_A Probable glutamate/gamm 99.6 3.2E-13 1.1E-17 135.5 33.0 240 41-289 8-262 (511)
4 2jln_A MHP1; hydantoin, transp 98.8 1E-05 3.5E-10 80.3 30.7 286 44-338 25-332 (501)
5 3dh4_A Sodium/glucose cotransp 98.5 0.00038 1.3E-08 69.5 31.0 112 40-153 16-130 (530)
6 2xq2_A Sodium/glucose cotransp 98.0 0.0095 3.3E-07 60.2 30.2 110 42-153 47-159 (593)
7 2a65_A Leutaa, Na(+):neurotran 98.0 0.016 5.4E-07 57.1 30.0 290 46-336 9-371 (519)
8 4b4a_A TATC, SEC-independent p 66.6 65 0.0022 28.0 14.7 93 303-395 59-175 (249)
9 3l1l_A Arginine/agmatine antip 25.7 4E+02 0.014 24.6 15.0 45 106-150 259-303 (445)
10 4ain_A Glycine betaine transpo 15.5 7.8E+02 0.027 23.9 18.5 24 43-66 93-116 (539)
No 1
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=99.85 E-value=1.6e-18 Score=171.22 Aligned_cols=241 Identities=10% Similarity=0.103 Sum_probs=171.6
Q ss_pred CCCCCchHHHHHHHHHHhhccccchhHHHHhhhcHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCHHHHHHHhhchhh
Q 013974 42 IAHGCSFTQTIFNGINVMAGVGLLSTPYTVKEAGWASLVVLLLFAVVCCYTASLMRYCFESKEGITTYPDIGEAAFGKYG 121 (433)
Q Consensus 42 ~~~~~s~~~~~~~l~~~~iG~Gil~lP~~~~~~G~~g~~~~l~~~~~~~~s~~~l~~~~~~~~~~~~y~~l~~~~~G~~~ 121 (433)
.+|+.+.++.....+++++|+|++.+|....+.|..+++.+++.++........+.|.+++.|+..+..+..++.+||+.
T Consensus 6 ~~r~l~~~~~~~l~ig~~iG~Gif~~~~~~~~~G~~~~~~~li~~~~~~~~a~~~~el~~~~p~~Gg~y~~~~~~~G~~~ 85 (445)
T 3l1l_A 6 DAHKVGLIPVTLMVSGAIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFL 85 (445)
T ss_dssp -CCCBCHHHHHHHHHHHHCSSHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTTHHHHHHHHSCHHH
T ss_pred CCCcccHHHHHHHHHHhHHhhhHHhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCchhhHHhHcCChH
Confidence 35679999999999999999999999988888887788888999999999999999999889998899999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCCCCCCCCCcccCchhHHHHHHHHHHhhhhccccCchhhHhHHHHHHHH
Q 013974 122 RLLISVLLYTELYSYCVEFIILEGDNLTSLFPGASLDWPGFQLDSTHLFGILTALIVLPTIWLRDLRVISYLSATGVVAT 201 (433)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~y~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~pl~~~~~~~~l~~~s~~~~~~~ 201 (433)
+++..+...+........+....++++...++.... .. ......+..+++.-....+..+...+++.......
T Consensus 86 g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~~in~~g~~~~~~~~~~~~~~~ 158 (445)
T 3l1l_A 86 GYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKD-----PW--VLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLA 158 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCGGGGS-----HH--HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccccc-----cH--HHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 999999998888777788888888888776553110 00 11111112222222333445666666655444333
Q ss_pred HHHHHHhhhhcc--ccccccCCCC---ccccccChhhhhhhHhhhcccccchhhHHhhccchh-hhHHHHHHHHHHHHHH
Q 013974 202 ILIVLCVLFLGT--IEGIGFHPTG---QVVKWSGMPFAIGIYGFCYSGHSVFPNIYQSMADKT-KFTKALITCFALCVLI 275 (433)
Q Consensus 202 ~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~~~~faf~~~~~i~~i~~~m~~p~-~~~~~~~~~~~~~~~~ 275 (433)
+...+.+..... .+..+..... ...++.++..++....|+|.|.+.+..+.+|+|||+ +.+|++..+..++.++
T Consensus 159 i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~af~G~e~~~~~~~e~k~p~r~ip~a~~~~~~~~~~~ 238 (445)
T 3l1l_A 159 LIPIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVC 238 (445)
T ss_dssp HHHHHHHHHTTSTTCCCCCCCCC-----------HHHHHHHHHHTTTTTTHHHHGGGGBSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhChhhcccccCccCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCccccccHHHHHHHHHHHHH
Confidence 332222222221 1111111111 112356788899999999999999999999999996 6899999999999999
Q ss_pred HHHHHhHHHHhhcc
Q 013974 276 YGGVAVMGFLMFGQ 289 (433)
Q Consensus 276 y~~~g~~gy~~fg~ 289 (433)
|....+......+.
T Consensus 239 y~~~~~~~~~~~~~ 252 (445)
T 3l1l_A 239 YVLSTTAIMGMIPN 252 (445)
T ss_dssp HHHHHHHHHHHSCT
T ss_pred HHHHHHHHHhcCCH
Confidence 99988776666553
No 2
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C
Probab=99.76 E-value=6.7e-16 Score=152.27 Aligned_cols=240 Identities=17% Similarity=0.136 Sum_probs=165.6
Q ss_pred CCCCCchHHHHHHHHHHhhccccchhHHH-HhhhcHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCHHHHHHHhhchh
Q 013974 42 IAHGCSFTQTIFNGINVMAGVGLLSTPYT-VKEAGWASLVVLLLFAVVCCYTASLMRYCFESKEGITTYPDIGEAAFGKY 120 (433)
Q Consensus 42 ~~~~~s~~~~~~~l~~~~iG~Gil~lP~~-~~~~G~~g~~~~l~~~~~~~~s~~~l~~~~~~~~~~~~y~~l~~~~~G~~ 120 (433)
.+|+.+.++.....+++++|+|++.+|.. .+.+|...++.+++.+.+.......+.|.+.+.|+.....+..++.+||+
T Consensus 4 ~~r~l~~~~~~~l~~g~~iG~gi~~~~~~~~~~~G~~~~~~~li~~~~~~~~~~~~~el~~~~P~~Gg~y~~~~~~~G~~ 83 (444)
T 3gia_A 4 KNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIGDN 83 (444)
T ss_dssp CCCCBCHHHHHHHHHHHHHHHHTTTSHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHCSS
T ss_pred cCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHhHHHHhCcc
Confidence 35679999999999999999999998844 56667668888889999999999999999988999888889999999996
Q ss_pred h-hHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCCCCCCCCCcccCchhHHHHHHHHHHhhhhccccCchhhHhHHHHHH
Q 013974 121 G-RLLISVLLYTELYSYCVEFIILEGDNLTSLFPGASLDWPGFQLDSTHLFGILTALIVLPTIWLRDLRVISYLSATGVV 199 (433)
Q Consensus 121 ~-~~~~~~~~~~~~~~~~~~y~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~pl~~~~~~~~l~~~s~~~~~ 199 (433)
+ .....+..++........+....++++...++.... .. ......+..++++-....+..+...+++.....
T Consensus 84 ~~~g~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~~in~~g~~~~~~~~~~~~~ 156 (444)
T 3gia_A 84 IITGALSILLWMSYVISIALFAKGFAGYFLPLINAPIN-----TF--NIAITEIGIVAFFTALNFFGSKAVGRAEFFIVL 156 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC-----HH--HHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc-----hH--HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3 223456666666667778888888998887764210 00 011111122222223334455655655554433
Q ss_pred HHHHHHHHhhhhc--cccccccCCCCccccccChhhhhhhHhhhcccccchhhHHhhccchh-hhHHHHHHHHHHHHHHH
Q 013974 200 ATILIVLCVLFLG--TIEGIGFHPTGQVVKWSGMPFAIGIYGFCYSGHSVFPNIYQSMADKT-KFTKALITCFALCVLIY 276 (433)
Q Consensus 200 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~faf~~~~~i~~i~~~m~~p~-~~~~~~~~~~~~~~~~y 276 (433)
..+...+..+..+ ..+..+..+.....++.++..++....|+|.|.+.+....+|+|||+ +.+|++..+..++.++|
T Consensus 157 ~~i~~~~~~ii~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~G~e~~~~~~~e~k~P~r~ip~ai~~~~~~~~~~y 236 (444)
T 3gia_A 157 VKLLILGLFIFAGLITIHPSYVIPDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVY 236 (444)
T ss_dssp HHHHHHHHHHHHHHHHCCGGGTSCCCSHHHHHHHHHHHHHGGGGGTHHHHHHTTGGGBSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcChhhcCCCCCCcchHHHHHHHHHHHHHHHhHHHHHHHHHHccCcccchhHHHHHHHHHHHHHH
Confidence 3222222221111 11222232222233456677888889999999999999999999997 59999999999999999
Q ss_pred HHHHhHHHHhhc
Q 013974 277 GGVAVMGFLMFG 288 (433)
Q Consensus 277 ~~~g~~gy~~fg 288 (433)
....+......+
T Consensus 237 ~~~~~~~~~~~~ 248 (444)
T 3gia_A 237 VGVAISAIGNLP 248 (444)
T ss_dssp HHHHHHHHTTSC
T ss_pred HHHHHHHHhCCC
Confidence 998776554443
No 3
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A
Probab=99.65 E-value=3.2e-13 Score=135.52 Aligned_cols=240 Identities=10% Similarity=0.088 Sum_probs=146.8
Q ss_pred cCCCCCchHHHHHHHHHHhhccccchhHHHHhhhcHHHHHHHHHHHHHHH-HHHHHHHHhhh--hCCCCCCHHHHHHHhh
Q 013974 41 PIAHGCSFTQTIFNGINVMAGVGLLSTPYTVKEAGWASLVVLLLFAVVCC-YTASLMRYCFE--SKEGITTYPDIGEAAF 117 (433)
Q Consensus 41 ~~~~~~s~~~~~~~l~~~~iG~Gil~lP~~~~~~G~~g~~~~l~~~~~~~-~s~~~l~~~~~--~~~~~~~y~~l~~~~~ 117 (433)
+.+|+.+.++.....+++++| +.++|. ....|...++..++.+.+.. .....+.|.+. +.| .......+++.+
T Consensus 8 ~~~r~l~~~~~~~l~~~~~ig--~~~~~~-~~~~G~~~~~~~~i~~~~~~l~~al~~ael~s~~~~P-~GG~y~~~~~~~ 83 (511)
T 4djk_A 8 GKAKQLTLLGFFAITASMVMA--VYEYPT-FATSGFSLVFFLLLGGILWFIPVGLCAAEMATVDGWE-EGGVFAWVSNTL 83 (511)
T ss_dssp ----CCCHHHHHHHTGGGGCC--GGGHHH-HHTTTTHHHHHHHHHHHHTHHHHHHHHHHHHTTSCC----CHHHHHHHHH
T ss_pred ccCccccHHHHHHHHHHHHHh--hchhHH-HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCC-CCChhhhHHhhc
Confidence 346779999999999999996 667885 45666655555555554443 47888999988 899 999999999999
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCCCCCCCCCcccCc-hhHHHHHHHHHHhhhhccccCchhhHhHHH
Q 013974 118 GKYGRLLISVLLYTELYSYCVEFIILEGDNLTSLFPGASLDWPGFQLDS-THLFGILTALIVLPTIWLRDLRVISYLSAT 196 (433)
Q Consensus 118 G~~~~~~~~~~~~~~~~~~~~~y~i~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~pl~~~~~~~~l~~~s~~ 196 (433)
||+.+++..+..++.......++....++.+...+.. ++..... ......+..++++-....+..+...+++..
T Consensus 84 g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----p~~~~~~~~~~~~~~~~~~~~~~in~~g~~~~~~~~~~ 158 (511)
T 4djk_A 84 GPRWGFAAISFGYLQIAIGFIPMLYFVLGALSYILKW-----PALNEDPITKTIAALIILWALALTQFGGTKYTARIAKV 158 (511)
T ss_dssp CHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTTTTC-----GGGTSCSSHHHHHHHHHHHHHHHHHHTCSSSHHHHTHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----cccccCcHHHHHHHHHHHHHHHHHHHhChHHHHHHHHH
Confidence 9999999999888887776667776677777655311 0111111 111111222222223334455655665554
Q ss_pred HHHH-HH---HHHHHhhhhccccccc----cCCCCccccc--cChhhhhhhHhhhcccccchhhHHhhccchh-hhHHHH
Q 013974 197 GVVA-TI---LIVLCVLFLGTIEGIG----FHPTGQVVKW--SGMPFAIGIYGFCYSGHSVFPNIYQSMADKT-KFTKAL 265 (433)
Q Consensus 197 ~~~~-~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~~~faf~~~~~i~~i~~~m~~p~-~~~~~~ 265 (433)
.... .+ +..+.........+.+ .+......++ .+...++...+|+|.|.+....+.+|+|||+ +.+|++
T Consensus 159 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~G~e~~~~~a~E~k~P~k~ip~ai 238 (511)
T 4djk_A 159 GFFAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDFSKVGTLVVFVAFILSYMGVEASATHVNEMSNPGRDYPLAM 238 (511)
T ss_dssp HHHHTTHHHHHHHHHHHHHHTC------------CCCCCTTSTTTTTTHHHHHHHHTTGGGGTGGGSSSSCCTTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccccCcccccCCCcccchHHHHHHHHHHHHhhHHHHHHHHHhccCcccchhHHH
Confidence 3222 11 1111111111111110 1111111121 2345677889999999999999999999997 699999
Q ss_pred HHHHHHHHHHHHHHHhHHHHhhcc
Q 013974 266 ITCFALCVLIYGGVAVMGFLMFGQ 289 (433)
Q Consensus 266 ~~~~~~~~~~y~~~g~~gy~~fg~ 289 (433)
..+..++.++|....+......++
T Consensus 239 ~~~~~~~~~~y~~~~~~~~~~~~~ 262 (511)
T 4djk_A 239 LLLMVAAICLSSVGGLSIAMVIPG 262 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCT
T ss_pred HHHHHHHHHHHHHHHHHHHeecCH
Confidence 999999999999988776655553
No 4
>2jln_A MHP1; hydantoin, transporter, membrane protein, nucleobase-cation-symport-1 family; 2.85A {Microbacterium liquefaciens} PDB: 2jlo_A* 2x79_A
Probab=98.80 E-value=1e-05 Score=80.25 Aligned_cols=286 Identities=9% Similarity=0.047 Sum_probs=149.6
Q ss_pred CCCchHHHHHHHHHHhhccccchhHHHHhh-hcHH-HHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCHHHHHHHhhchhh
Q 013974 44 HGCSFTQTIFNGINVMAGVGLLSTPYTVKE-AGWA-SLVVLLLFAVVCCYTASLMRYCFESKEGITTYPDIGEAAFGKYG 121 (433)
Q Consensus 44 ~~~s~~~~~~~l~~~~iG~Gil~lP~~~~~-~G~~-g~~~~l~~~~~~~~s~~~l~~~~~~~~~~~~y~~l~~~~~G~~~ 121 (433)
|+.++++....-.+..++.+.+.+...+.. .++. +++..++..++....+........ +.+ .++.++.|..||++|
T Consensus 25 R~~~~~~~~~~W~g~~~~i~~~~~Ga~~~~GLs~~~a~lai~lG~li~~~~~~l~~~~G~-~~G-l~~~v~~R~~FG~~G 102 (501)
T 2jln_A 25 RSVGPFSLAAIWFAMAIQVAIFIAAGQMTSSFQVWQVIVAIAAGCTIAVILLFFTQSAAI-RWG-INFTVAARMPFGIRG 102 (501)
T ss_dssp CCBCHHHHHHHHHHHHCSTHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHTHHHH-HHC-CCHHHHTTTTSCTTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHhHHHh-hcC-CChhhhhHhhcchhH
Confidence 446778887777777777777666655543 2245 555555544444444444434332 333 349999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCCCCCCCCCcccCchhHHHHHHHHHHhhhhccccCchhhHhHHHHHHHH
Q 013974 122 RLLISVLLYTELYSYCVEFIILEGDNLTSLFPGASLDWPGFQLDSTHLFGILTALIVLPTIWLRDLRVISYLSATGVVAT 201 (433)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~y~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~pl~~~~~~~~l~~~s~~~~~~~ 201 (433)
..+..+...+.+.+-........++.+...+.... .. .......++..++.+++... ..+.+.++........
T Consensus 103 s~i~~ll~~i~~igw~~v~~~~gg~al~~~~~~~~-g~-----~~~~v~~~i~~~l~~~~~~~-G~~~i~~~~~~~~p~~ 175 (501)
T 2jln_A 103 SLIPITLKALLSLFWFGFQTWLGALALDEITRLLT-GF-----TNLPLWIVIFGAIQVVTTFY-GITFIRWMNVFASPVL 175 (501)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CC-----CCHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-Cc-----chHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHH
Confidence 99999988888888888888888888777653110 00 01223334444455554433 4455555554443333
Q ss_pred HHHHHHhhhhccc-ccc---ccCCCCccccccChhhhhhh-HhhhcccccchhhHHhhccchhh------------hHHH
Q 013974 202 ILIVLCVLFLGTI-EGI---GFHPTGQVVKWSGMPFAIGI-YGFCYSGHSVFPNIYQSMADKTK------------FTKA 264 (433)
Q Consensus 202 ~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~-~~faf~~~~~i~~i~~~m~~p~~------------~~~~ 264 (433)
++..+.+.+.... .+. +.....+......+..++.. ..+.-....+.+...+++|++++ ....
T Consensus 176 ~i~~i~~~~~~l~~~g~~~~~~~~~~~~~~~~~f~~ai~~~~~~~~~~~~~~~DysRy~~~~~~~~~~~~~~~~~~~~~g 255 (501)
T 2jln_A 176 LAMGVYMVYLMLDGADVSLGEVMSMGGENPGMPFSTAIMIFVGGWIAVVVSIHDIVKECKVDPNASREGQTKADARYATA 255 (501)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHTTCCCSSCCSCHHHHHHHHHTTTHHHHTTTHHHHTTBCCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCcchhhhccCCccchHHHHHHHHHHHHHHHHHHhccCcccccCCCCccccccchhhccchHHHH
Confidence 3222222221111 111 01111111122334444433 22222344678888999987776 3333
Q ss_pred HHHHHHHHHHHHHHHHhHHHHhhcccchhhhhhc-CCCchhhHHHHH-HHHHHHhhhhccc-cccchHHHHHhhcCC
Q 013974 265 LITCFALCVLIYGGVAVMGFLMFGQGTLSQITLN-MPPHAFASKVAV-WTTVINPFTKYAL-LMNPLARSIEELLPA 338 (433)
Q Consensus 265 ~~~~~~~~~~~y~~~g~~gy~~fg~~~~~~i~~~-~~~~~~~~~~~~-~~~~~~~~~s~p~-~~~~~~~~~~~~~~~ 338 (433)
...+..+...+...+|.......+......+... ++.......... +..+++.+.+--. ..++....+.+..++
T Consensus 256 ~~lG~~i~~~~~~~lG~~~~~~~~~~dp~~~l~~~l~~~~~~~~~~~~~~~~la~i~tn~~~n~ys~~~~l~~~~~~ 332 (501)
T 2jln_A 256 QWLGMVPASIIFGFIGAASMVLVGEWNPVIAITEVVGGVSIPMAILFQVFVLLATWSTNPAANLLSPAYTLCSTFPR 332 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHTCCCHHHHHHHHHHHHHHHHTTHHHHHTHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhCcc
Confidence 3344555555555555543333333333334333 222112123333 4455555555443 677777777777654
No 5
>3dh4_A Sodium/glucose cotransporter; membrane protein, symporter, sugar transport, SGLT, ION TRAN membrane, sodium transport, symport; HET: GAL; 2.70A {Vibrio parahaemolyticus}
Probab=98.46 E-value=0.00038 Score=69.50 Aligned_cols=112 Identities=14% Similarity=0.156 Sum_probs=70.1
Q ss_pred ccCCCCCchHHHHHHHHHHhhccc-cchhHHHHhhhcHH-HHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCHHHHHHHhh
Q 013974 40 LPIAHGCSFTQTIFNGINVMAGVG-LLSTPYTVKEAGWA-SLVVLLLFAVVCCYTASLMRYCFESKEGITTYPDIGEAAF 117 (433)
Q Consensus 40 ~~~~~~~s~~~~~~~l~~~~iG~G-il~lP~~~~~~G~~-g~~~~l~~~~~~~~s~~~l~~~~~~~~~~~~y~~l~~~~~ 117 (433)
--..|+.+++...+.+..+.+++. ++++|....+.|+. ....+. .+.........+....+ ..+..|..|+.++-|
T Consensus 16 ~laGR~l~~~~~~~s~~at~~Sa~~~lG~~g~~y~~G~~~~~~~~~-~~~~~~i~~~~~~p~~~-~~~~~T~~e~l~~Rf 93 (530)
T 3dh4_A 16 XXAGKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWM-SAITLIIVGKYFLPIFI-EKGIYTIPEFVEKRF 93 (530)
T ss_dssp HCCCSCCCHHHHHHHHHHHHCSHHHHTHHHHHHHHTCGGGHHHHHH-HHHHHHHHHHHTHHHHH-HTTCCSHHHHHHHHT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHH-HHHHHHHHHHHHHHHHH-HcCCccHHHHHHHHc
Confidence 344677899999999999999887 78899888788865 221111 11111222333334333 457799999999999
Q ss_pred chhhhHHHHHHHHH-HHHHHHHHHHHHhhhhhhhhcC
Q 013974 118 GKYGRLLISVLLYT-ELYSYCVEFIILEGDNLTSLFP 153 (433)
Q Consensus 118 G~~~~~~~~~~~~~-~~~~~~~~y~i~~~~~l~~~~~ 153 (433)
|++.+.+..+...+ +.+....+-+...+..++.+++
T Consensus 94 g~~~~~~~a~~~l~~~~~~~~~~~l~~~~~~~~~~~G 130 (530)
T 3dh4_A 94 NKKLKTILAVFWISLYIFVNLTSVLYLGGLALETILG 130 (530)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99988877765433 2333333333344555666554
No 6
>2xq2_A Sodium/glucose cotransporter; transport protein, inverted repeats, LEUT-fold, galactose; 2.73A {Vibrio parahaemolyticus} PDB: 2xq2_B 2kpe_A
Probab=98.01 E-value=0.0095 Score=60.20 Aligned_cols=110 Identities=15% Similarity=0.157 Sum_probs=64.7
Q ss_pred CCCCCchHHHHHHHHHHhhccc-cchhHHHHhhhcHH-HHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCHHHHHHHhhch
Q 013974 42 IAHGCSFTQTIFNGINVMAGVG-LLSTPYTVKEAGWA-SLVVLLLFAVVCCYTASLMRYCFESKEGITTYPDIGEAAFGK 119 (433)
Q Consensus 42 ~~~~~s~~~~~~~l~~~~iG~G-il~lP~~~~~~G~~-g~~~~l~~~~~~~~s~~~l~~~~~~~~~~~~y~~l~~~~~G~ 119 (433)
..|+.+++.....+..+.+++. .++.|....+.|+. ....+. .+.......+.+..-.+ +.+..|..|+.++-||+
T Consensus 47 aGR~l~~~~~~~Sl~at~~sa~t~lG~~g~~y~~G~~~~~~~~~-~~~~~~~~~~~~~p~~~-r~~~~T~~e~l~~Rfg~ 124 (593)
T 2xq2_A 47 AGKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWM-SAITLIIVGKYFLPIFI-EKGIYTIPEFVEKRFNK 124 (593)
T ss_dssp ----CCHHHHHHHHHGGGSSHHHHHHHHHHHHHTCGGGGHHHHH-HHHHHHHHHHTHHHHHH-HTTCCSHHHHHHHHTCH
T ss_pred CCCCCCHHHHHHHHHHHHhcHHHHhhHhHHHHHcCHHHHHHHHH-HHHHHHHHHHHHHHHHH-hCCCCCcHHHHHHHccC
Confidence 4567889999999988888877 67899777778864 222111 11111122233333333 45789999999999999
Q ss_pred hhhHHHHHHHHH-HHHHHHHHHHHHhhhhhhhhcC
Q 013974 120 YGRLLISVLLYT-ELYSYCVEFIILEGDNLTSLFP 153 (433)
Q Consensus 120 ~~~~~~~~~~~~-~~~~~~~~y~i~~~~~l~~~~~ 153 (433)
+.+.+..+...+ ..+......+...+..++.+++
T Consensus 125 ~~~~~~ai~~l~~~~~~~~~~~l~~~~~~l~~~~G 159 (593)
T 2xq2_A 125 KLKTILAVFWISLYIFVNLTSVLYLGGLALETILG 159 (593)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 888776654332 3333333344445566666654
No 7
>2a65_A Leutaa, Na(+):neurotransmitter symporter (SNF family); membrane protein, transport protein; HET: BOG; 1.65A {Aquifex aeolicus} SCOP: f.54.1.1 PDB: 2q6h_A* 2q72_A* 2qb4_A* 2qei_A* 3f3a_A* 3f3c_A* 3f3d_A* 3f3e_A* 3f48_A* 3f4i_A* 3f4j_A* 3usg_A* 3usi_A 3usj_A 3usk_A 3usl_A* 3usm_A* 3uso_A 3usp_A* 3qs5_A* ...
Probab=97.98 E-value=0.016 Score=57.09 Aligned_cols=290 Identities=14% Similarity=0.094 Sum_probs=137.6
Q ss_pred CchHHHHHHHHHHhhccc-cchhHHHHhhhcHH-HHH----HHHHHHHHHHHHHHHHHHhhhhCCCCCCHHHHHHHhhch
Q 013974 46 CSFTQTIFNGINVMAGVG-LLSTPYTVKEAGWA-SLV----VLLLFAVVCCYTASLMRYCFESKEGITTYPDIGEAAFGK 119 (433)
Q Consensus 46 ~s~~~~~~~l~~~~iG~G-il~lP~~~~~~G~~-g~~----~~l~~~~~~~~s~~~l~~~~~~~~~~~~y~~l~~~~~G~ 119 (433)
.|..+-+...+++.+|-| +.-.|+-..+-|.. -++ .+++.|.=..+.=..+.|-.++.. +++-.+..++...+
T Consensus 9 ~sr~~FiLa~~G~AVGLGNiWRFPyl~~~nGGgAFlipYli~l~~~GiPll~~E~alGq~~~~~~-r~~~i~a~~~l~~~ 87 (519)
T 2a65_A 9 ATRLGLILAMAGNAVGLGNFLRFPVQAAENGGGAFMIPYIIAFLLVGIPLMWIEWAMGRYGGAQG-HGTTPAIFYLLWRN 87 (519)
T ss_dssp SCHHHHHHHHHHHHSSHHHHTHHHHHHHHTTTHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTT-CCSHHHHHHHHSCS
T ss_pred CcHHHHHHHHHHHHhcccHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHhcccchhcc-CCCHHHHHHHhcCC
Confidence 577899999999999999 88899887655533 333 333333333333344444222122 23334444444332
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc----CCC----CCCC--C------------------C--ccc--Cch
Q 013974 120 YGRLLISVLLYTELYSYCVEFIILEGDNLTSLF----PGA----SLDW--P------------------G--FQL--DST 167 (433)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~y~i~~~~~l~~~~----~~~----~~~~--~------------------~--~~~--~~~ 167 (433)
+....+++...+..+...+.|.++.+-.+.-++ +.. ..+. . + ... ..+
T Consensus 88 ~~~~giG~~~v~~~~~i~~yY~vi~gW~l~Y~~~s~~~~lp~~w~~~~~~~~~~~~~~~~f~~~l~~~~~~~~~g~~~~~ 167 (519)
T 2a65_A 88 RFAKILGVFGLWIPLVVAIYYVYIESWTLGFAIKFLVGLVPEPPPNATDPDSILRPFKEFLYSYIGVPKGDEPILKPSLF 167 (519)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC--CCHHHHHHHHHHHHHHHHTCCSSSSCBCCCCHH
T ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCcccccCcHHHHHHHHHCCCCCcccccCccHH
Confidence 112224444444555555666655544432111 110 0000 0 0 000 001
Q ss_pred hHHHHHHHHHHhhhhccccC-chhhHhHHHHHHHHHHHHHHhhhhcc-cccc--------ccCCCCcccc---ccChhhh
Q 013974 168 HLFGILTALIVLPTIWLRDL-RVISYLSATGVVATILIVLCVLFLGT-IEGI--------GFHPTGQVVK---WSGMPFA 234 (433)
Q Consensus 168 ~~~~i~~~~~~~pl~~~~~~-~~l~~~s~~~~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~~---~~~~~~~ 234 (433)
.....+...++.-++..|.. |.+.+++.+.+....++.+++.+... .+++ ..--.+++.. .+-+.++
T Consensus 168 ~~~~~~~~w~i~~~ii~~Gv~kgiek~~~~~mp~l~vlliiL~ir~ltLpGp~~~A~~Gl~~~~~Pd~s~L~~~~vw~~A 247 (519)
T 2a65_A 168 AYIVFLITMFINVSILIRGISKGIERFAKIAMPTLFILAVFLVIRVFLLETPNGTAADGLNFLWTPDFEKLKDPGVWIAA 247 (519)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTTTHHHHHHHHHHHHHHHHHHHHHHHTTCEETTEEHHHHHHHHHSCCTTSTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHhcCCHHHhCCHHHHHHH
Confidence 11112222233334566777 56777777666555544444444432 2221 1101122222 2335679
Q ss_pred hhhHhhhcc-cccchhhHHhhccchhhhHHHHHHHHHHHHHH-----HHHHHhHHHHhhccc-c-----hh---------
Q 013974 235 IGIYGFCYS-GHSVFPNIYQSMADKTKFTKALITCFALCVLI-----YGGVAVMGFLMFGQG-T-----LS--------- 293 (433)
Q Consensus 235 ~~~~~faf~-~~~~i~~i~~~m~~p~~~~~~~~~~~~~~~~~-----y~~~g~~gy~~fg~~-~-----~~--------- 293 (433)
.+...|+.+ |...+....+.+++.++..|........-... ..+++..||.++|.+ . .+
T Consensus 248 ~gQ~FFSLslG~G~~ity~SY~~~~~n~~~~a~~v~~~n~~~sllaG~~IF~~lgf~a~g~~~~~~v~~~G~pgL~Fi~~ 327 (519)
T 2a65_A 248 VGQIFFTLSLGFGAIITYASYVRKDQDIVLSGLTAATLNEKAEVILGGSISIPAAVAFFGVANAVAIAKAGAFNLGFITL 327 (519)
T ss_dssp HHHHHHHHTTTSSHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCHHHHHHHHHHCSSHHHHTHH
T ss_pred HHHHHHHhHHHHhHHhhhhcccCCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHhcCCCCceeHHHH
Confidence 999999998 67777777777877776655433332222222 222333455444533 1 11
Q ss_pred -hhhhcCCCchhhHHHHHHHHHHHhhhhccccccchHHHHHhhc
Q 013974 294 -QITLNMPPHAFASKVAVWTTVINPFTKYALLMNPLARSIEELL 336 (433)
Q Consensus 294 -~i~~~~~~~~~~~~~~~~~~~~~~~~s~p~~~~~~~~~~~~~~ 336 (433)
++..++|.+.....+......+.-++|.-..+-+....+.|.+
T Consensus 328 P~af~~mp~g~~~~~lFF~~l~~agltS~i~~~E~~vt~l~D~~ 371 (519)
T 2a65_A 328 PAIFSQTAGGTFLGFLWFFLLFFAGLTSSIAIMQPMIAFLEDEL 371 (519)
T ss_dssp HHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHhCCCccchHHHHHHHHHHHHHHHHHHHhhHhHHHHHHhh
Confidence 1223445333333333333444444454444455555666655
No 8
>4b4a_A TATC, SEC-independent protein translocase protein TATC; transport protein, TAT secretion system, protein translocati; HET: LMN; 3.50A {Aquifex aeolicus}
Probab=66.63 E-value=65 Score=27.99 Aligned_cols=93 Identities=13% Similarity=0.152 Sum_probs=57.1
Q ss_pred hhhHHHHHHHHHHHhhhhccccccchHHHHHhhcCCCCCchhhHHHHHHHHHHHHHHHHHhhc-----------------
Q 013974 303 AFASKVAVWTTVINPFTKYALLMNPLARSIEELLPAGISNNYWCFILLRTALVFSSVCAAFLL----------------- 365 (433)
Q Consensus 303 ~~~~~~~~~~~~~~~~~s~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~----------------- 365 (433)
+....-.++....+.+.+.|...+-.+..+.--+.+++++...................+.++
T Consensus 59 e~f~~~lkvs~~~g~~~a~P~ilyQiw~Fi~PgLy~~Err~~~~~~~~s~~LF~~G~~f~Yf~v~P~~~~Fl~~~~~~~i 138 (249)
T 4b4a_A 59 EPLFILIKISLAVGFIIASPVILYQFWRFIEPALYSHEKRAFIPLLLGSILLFMLGALFAYFIVLPLALKFLLGLGFTQL 138 (249)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSCCCTTTTHHHHHHHHHHHHHHHHHHHHTHHHHHHHTTTCSSSTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhh
Confidence 444455566777888999999988777766666666554433333333333333333333321
Q ss_pred ---c--cHHHHHHHHhHHHHHH--HHHhhHHHHHHHh
Q 013974 366 ---P--FFSLVMALIGSLLSIL--AIIMPSLCFIKIL 395 (433)
Q Consensus 366 ---p--~~~~v~~l~G~~~~~~--~~ilP~l~~l~~~ 395 (433)
| ++++-++++-.+...+ +|-+|.++.+..+
T Consensus 139 ~~~~~~~i~~Yl~fv~~l~l~fGl~FelPvi~~~L~~ 175 (249)
T 4b4a_A 139 LATPYLSVDMYISFVLKLVVAFGIAFEMPIVLYVLQK 175 (249)
T ss_dssp SSSTTEEHHHHHHHHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred HhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 6777777765555443 8889999888765
No 9
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=25.69 E-value=4e+02 Score=24.59 Aligned_cols=45 Identities=13% Similarity=0.214 Sum_probs=37.5
Q ss_pred CCCHHHHHHHhhchhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 013974 106 ITTYPDIGEAAFGKYGRLLISVLLYTELYSYCVEFIILEGDNLTS 150 (433)
Q Consensus 106 ~~~y~~l~~~~~G~~~~~~~~~~~~~~~~~~~~~y~i~~~~~l~~ 150 (433)
...+.++.++.+|+++..++.+...+..++...++....+..+..
T Consensus 259 ~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~sR~~~~ 303 (445)
T 3l1l_A 259 ASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKA 303 (445)
T ss_dssp TCTHHHHHHHHHCTTHHHHHHHHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456889999999999999998888888888888888877776654
No 10
>4ain_A Glycine betaine transporter BETP; membrane protein, chemosensor and osmosensor, secondary TRAN sodium coupled transport; HET: FLC CM5; 3.10A {Corynebacterium glutamicum} PDB: 4doj_A* 2w8a_A 2wit_A 3p03_A
Probab=15.49 E-value=7.8e+02 Score=23.91 Aligned_cols=24 Identities=21% Similarity=0.091 Sum_probs=18.7
Q ss_pred CCCCchHHHHHHHHHHhhccccch
Q 013974 43 AHGCSFTQTIFNGINVMAGVGLLS 66 (433)
Q Consensus 43 ~~~~s~~~~~~~l~~~~iG~Gil~ 66 (433)
+++-|.++-...+..+-+|.|++.
T Consensus 93 kPefS~~sW~aMlF~AGmGiGl~F 116 (539)
T 4ain_A 93 APEFRTVSWISMMFAAGMGIGLMF 116 (539)
T ss_dssp CCSSCHHHHHHHHHTTSCCTHHHH
T ss_pred CCCCcchHHHHHHHHHhhcchhee
Confidence 344677888888889999999763
Done!