Query 013976
Match_columns 432
No_of_seqs 206 out of 2897
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 03:14:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013976.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013976hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3f8u_A Protein disulfide-isome 100.0 3.4E-52 1.2E-56 412.6 41.3 372 1-393 74-466 (481)
2 3uem_A Protein disulfide-isome 100.0 4.6E-52 1.6E-56 396.7 37.4 340 44-390 15-359 (361)
3 2b5e_A Protein disulfide-isome 100.0 6.2E-51 2.1E-55 405.6 24.0 365 1-393 85-472 (504)
4 3apo_A DNAJ homolog subfamily 100.0 4.3E-40 1.5E-44 344.2 38.1 346 1-388 186-656 (780)
5 3apo_A DNAJ homolog subfamily 100.0 4.9E-36 1.7E-40 313.5 31.2 342 3-388 404-767 (780)
6 3us3_A Calsequestrin-1; calciu 100.0 2.8E-33 9.6E-38 266.2 25.6 248 1-267 90-354 (367)
7 3ec3_A Protein disulfide-isome 100.0 1E-31 3.6E-36 241.7 24.1 229 43-282 3-249 (250)
8 1sji_A Calsequestrin 2, calseq 100.0 1.5E-31 5E-36 253.4 25.9 246 1-265 88-350 (350)
9 2h8l_A Protein disulfide-isome 100.0 1.2E-31 4.1E-36 241.8 22.2 231 42-282 2-251 (252)
10 2r2j_A Thioredoxin domain-cont 100.0 3.8E-32 1.3E-36 260.3 17.9 281 1-302 81-376 (382)
11 4f9z_D Endoplasmic reticulum r 100.0 6.4E-29 2.2E-33 220.4 23.5 211 47-263 10-227 (227)
12 3idv_A Protein disulfide-isome 100.0 3.8E-28 1.3E-32 217.9 21.0 218 151-390 15-239 (241)
13 1sji_A Calsequestrin 2, calseq 99.9 7.9E-23 2.7E-27 193.4 29.5 309 47-391 12-349 (350)
14 1a8l_A Protein disulfide oxido 99.9 2.1E-24 7E-29 191.6 14.0 194 171-387 25-225 (226)
15 3us3_A Calsequestrin-1; calciu 99.9 2E-22 7E-27 191.4 27.5 315 47-396 14-356 (367)
16 2ywm_A Glutaredoxin-like prote 99.9 1.5E-23 5.3E-28 186.3 13.1 191 167-388 19-220 (229)
17 2hls_A Protein disulfide oxido 99.9 1.4E-21 4.6E-26 174.6 17.4 194 169-393 26-231 (243)
18 3uem_A Protein disulfide-isome 99.9 5.2E-20 1.8E-24 175.0 26.4 238 3-260 82-356 (361)
19 2r2j_A Thioredoxin domain-cont 99.9 1.3E-19 4.3E-24 173.3 24.2 307 48-394 7-335 (382)
20 2djk_A PDI, protein disulfide- 99.8 3.6E-20 1.2E-24 149.5 11.6 127 148-277 3-131 (133)
21 3f8u_A Protein disulfide-isome 99.8 6E-18 2.1E-22 167.0 28.6 306 48-393 3-339 (481)
22 3h79_A Thioredoxin-like protei 99.8 8.8E-20 3E-24 146.2 12.6 109 278-387 14-127 (127)
23 3bj5_A Protein disulfide-isome 99.8 1.1E-19 3.7E-24 148.4 12.7 133 144-277 7-143 (147)
24 2djj_A PDI, protein disulfide- 99.8 2E-18 6.7E-23 137.0 14.0 114 275-390 3-119 (121)
25 3ed3_A Protein disulfide-isome 99.8 1.5E-17 5.1E-22 152.9 20.6 215 150-393 16-272 (298)
26 3zzx_A Thioredoxin; oxidoreduc 99.8 9.6E-19 3.3E-23 134.5 9.4 94 286-386 8-104 (105)
27 2dj3_A Protein disulfide-isome 99.8 6.5E-18 2.2E-22 136.4 13.9 112 278-390 6-120 (133)
28 3ga4_A Dolichyl-diphosphooligo 99.8 8.9E-18 3.1E-22 139.9 13.1 120 278-397 17-162 (178)
29 3idv_A Protein disulfide-isome 99.7 8.6E-17 2.9E-21 143.7 19.6 202 46-261 15-237 (241)
30 2b5e_A Protein disulfide-isome 99.7 2.6E-16 9E-21 156.1 25.1 299 47-392 15-344 (504)
31 2qsi_A Putative hydrogenase ex 99.7 3E-18 1E-22 135.6 7.7 104 279-387 15-122 (137)
32 2trx_A Thioredoxin; electron t 99.7 2.7E-17 9.2E-22 127.5 11.4 104 279-387 2-107 (108)
33 2dj1_A Protein disulfide-isome 99.7 2.5E-17 8.4E-22 134.2 11.5 112 277-393 15-129 (140)
34 3gnj_A Thioredoxin domain prot 99.7 1.7E-17 5.9E-22 129.3 9.6 104 279-387 4-109 (111)
35 2av4_A Thioredoxin-like protei 99.7 2.1E-17 7.3E-22 132.6 10.0 104 281-387 23-138 (160)
36 2o8v_B Thioredoxin 1; disulfid 99.7 4.2E-17 1.4E-21 130.5 11.8 105 278-387 21-127 (128)
37 3evi_A Phosducin-like protein 99.7 3.9E-17 1.3E-21 127.8 10.6 104 279-389 3-115 (118)
38 2i4a_A Thioredoxin; acidophIle 99.7 7.6E-17 2.6E-21 124.7 11.8 103 279-386 2-106 (107)
39 2qgv_A Hydrogenase-1 operon pr 99.7 3E-18 1E-22 136.2 3.8 105 280-390 18-127 (140)
40 2voc_A Thioredoxin; electron t 99.7 6.5E-17 2.2E-21 126.3 11.4 103 281-390 3-107 (112)
41 1x5d_A Protein disulfide-isome 99.7 2.5E-17 8.7E-22 132.8 9.0 110 278-390 6-119 (133)
42 3uvt_A Thioredoxin domain-cont 99.7 4E-17 1.4E-21 127.2 9.6 104 279-387 5-111 (111)
43 1t00_A Thioredoxin, TRX; redox 99.7 7.7E-17 2.6E-21 125.8 10.4 105 279-388 5-111 (112)
44 2l5l_A Thioredoxin; structural 99.7 1.5E-16 5E-21 128.9 12.3 112 278-395 8-133 (136)
45 3die_A Thioredoxin, TRX; elect 99.7 9.4E-17 3.2E-21 123.9 10.1 101 280-387 4-106 (106)
46 2dml_A Protein disulfide-isome 99.7 8.6E-17 2.9E-21 129.2 10.2 107 278-388 16-124 (130)
47 1w4v_A Thioredoxin, mitochondr 99.7 6E-17 2.1E-21 127.9 9.1 106 277-387 11-118 (119)
48 3hz4_A Thioredoxin; NYSGXRC, P 99.7 4.9E-17 1.7E-21 132.4 8.5 107 278-389 5-113 (140)
49 3tco_A Thioredoxin (TRXA-1); d 99.7 9.5E-17 3.3E-21 124.5 9.8 104 278-387 3-108 (109)
50 1a8l_A Protein disulfide oxido 99.7 6.2E-16 2.1E-20 136.7 16.3 201 50-260 5-225 (226)
51 1mek_A Protein disulfide isome 99.7 9.1E-17 3.1E-21 126.9 9.8 111 278-390 6-119 (120)
52 1thx_A Thioredoxin, thioredoxi 99.7 1.3E-16 4.5E-21 125.0 10.6 105 279-388 7-113 (115)
53 2dbc_A PDCL2, unnamed protein 99.7 2.8E-16 9.5E-21 126.9 12.5 108 278-392 9-125 (135)
54 1dby_A Chloroplast thioredoxin 99.7 1.2E-16 4E-21 123.6 9.6 102 281-387 3-106 (107)
55 2ppt_A Thioredoxin-2; thiredox 99.7 1.3E-16 4.4E-21 132.1 10.1 106 278-389 46-153 (155)
56 3p2a_A Thioredoxin 2, putative 99.7 1.4E-16 4.9E-21 131.0 10.2 106 278-389 37-144 (148)
57 2i1u_A Thioredoxin, TRX, MPT46 99.7 1.3E-16 4.4E-21 126.4 9.6 106 278-388 11-118 (121)
58 3dxb_A Thioredoxin N-terminall 99.7 2.8E-16 9.7E-21 138.4 12.5 114 275-393 8-123 (222)
59 1fb6_A Thioredoxin M; electron 99.7 2.1E-16 7.1E-21 121.7 10.2 102 281-387 2-105 (105)
60 4euy_A Uncharacterized protein 99.7 1.3E-16 4.5E-21 122.9 8.8 96 285-387 7-104 (105)
61 1nsw_A Thioredoxin, TRX; therm 99.7 2.4E-16 8.2E-21 121.4 9.9 101 281-387 2-104 (105)
62 1oaz_A Thioredoxin 1; immune s 99.7 1.1E-16 3.8E-21 127.0 8.2 104 279-387 3-122 (123)
63 3hxs_A Thioredoxin, TRXP; elec 99.7 2.5E-16 8.4E-21 128.4 10.4 107 278-389 21-140 (141)
64 2yzu_A Thioredoxin; redox prot 99.7 2.5E-16 8.4E-21 122.1 9.9 104 280-389 2-107 (109)
65 3aps_A DNAJ homolog subfamily 99.7 1.4E-16 4.7E-21 126.4 8.5 105 279-388 3-113 (122)
66 4f9z_D Endoplasmic reticulum r 99.7 2.6E-15 8.9E-20 132.6 17.4 204 153-389 12-226 (227)
67 3qfa_C Thioredoxin; protein-pr 99.7 1.3E-16 4.3E-21 125.5 7.1 101 280-387 13-116 (116)
68 2pu9_C TRX-F, thioredoxin F-ty 99.7 5E-16 1.7E-20 121.0 10.4 103 278-387 4-110 (111)
69 1x5e_A Thioredoxin domain cont 99.6 4.9E-16 1.7E-20 124.0 9.8 106 278-391 6-113 (126)
70 1a0r_P Phosducin, MEKA, PP33; 99.6 1.5E-16 5.1E-21 140.5 7.1 133 253-389 87-227 (245)
71 2trc_P Phosducin, MEKA, PP33; 99.6 7.1E-17 2.4E-21 140.8 4.6 131 251-389 72-214 (217)
72 2e0q_A Thioredoxin; electron t 99.6 6E-16 2.1E-20 118.7 9.0 101 281-388 1-103 (104)
73 1gh2_A Thioredoxin-like protei 99.6 9.8E-16 3.3E-20 118.4 10.1 100 281-387 3-106 (107)
74 1v98_A Thioredoxin; oxidoreduc 99.6 7.9E-16 2.7E-20 125.2 9.5 105 279-389 33-139 (140)
75 1r26_A Thioredoxin; redox-acti 99.6 1E-15 3.6E-20 121.7 10.0 102 279-388 19-123 (125)
76 1xwb_A Thioredoxin; dimerizati 99.6 1.2E-15 4.3E-20 117.5 10.2 101 281-387 2-106 (106)
77 3f3q_A Thioredoxin-1; His TAG, 99.6 7.9E-16 2.7E-20 119.4 8.9 100 280-387 8-109 (109)
78 3apq_A DNAJ homolog subfamily 99.6 9.5E-16 3.3E-20 133.8 9.8 108 278-391 96-205 (210)
79 3qou_A Protein YBBN; thioredox 99.6 1.3E-15 4.4E-20 139.9 11.1 105 278-387 6-113 (287)
80 3gix_A Thioredoxin-like protei 99.6 9.4E-16 3.2E-20 125.9 8.9 99 284-387 9-120 (149)
81 3ul3_B Thioredoxin, thioredoxi 99.6 9.4E-16 3.2E-20 122.7 8.5 95 287-386 32-128 (128)
82 1ep7_A Thioredoxin CH1, H-type 99.6 1.1E-15 3.9E-20 119.1 8.5 103 280-388 3-111 (112)
83 2vlu_A Thioredoxin, thioredoxi 99.6 1.6E-15 5.5E-20 120.2 9.3 104 278-388 12-120 (122)
84 3ed3_A Protein disulfide-isome 99.6 3.5E-15 1.2E-19 137.0 12.2 158 1-160 90-279 (298)
85 2ywm_A Glutaredoxin-like prote 99.6 1.6E-14 5.4E-19 127.9 16.0 194 53-261 7-220 (229)
86 1faa_A Thioredoxin F; electron 99.6 3E-15 1E-19 119.0 10.2 103 278-387 17-123 (124)
87 1syr_A Thioredoxin; SGPP, stru 99.6 1.9E-15 6.3E-20 117.9 8.6 101 279-387 9-111 (112)
88 1xfl_A Thioredoxin H1; AT3G510 99.6 4.2E-15 1.4E-19 118.1 10.6 103 278-387 15-123 (124)
89 3d6i_A Monothiol glutaredoxin- 99.6 2.3E-15 8E-20 117.3 9.0 102 281-387 2-108 (112)
90 2xc2_A Thioredoxinn; oxidoredu 99.6 2.2E-15 7.7E-20 118.4 8.6 100 280-387 14-117 (117)
91 3q6o_A Sulfhydryl oxidase 1; p 99.6 6E-14 2.1E-18 125.4 19.0 217 151-388 12-240 (244)
92 2vim_A Thioredoxin, TRX; thior 99.6 3.7E-15 1.3E-19 114.4 9.4 99 282-387 2-104 (104)
93 2l4c_A Endoplasmic reticulum r 99.6 5.2E-15 1.8E-19 116.4 10.0 106 40-150 13-124 (124)
94 2dj0_A Thioredoxin-related tra 99.6 2.3E-16 7.8E-21 127.9 2.1 104 279-386 7-119 (137)
95 3m9j_A Thioredoxin; oxidoreduc 99.6 4.3E-15 1.5E-19 114.3 9.2 96 285-387 7-105 (105)
96 3q6o_A Sulfhydryl oxidase 1; p 99.6 8.5E-15 2.9E-19 130.9 11.6 113 278-391 11-130 (244)
97 2es7_A Q8ZP25_salty, putative 99.6 1.2E-15 4.1E-20 123.7 5.4 106 280-392 18-129 (142)
98 2c0g_A ERP29 homolog, windbeut 99.6 7.1E-15 2.4E-19 129.9 10.7 104 278-388 15-132 (248)
99 3t58_A Sulfhydryl oxidase 1; o 99.6 1E-13 3.5E-18 136.2 20.0 220 152-391 13-243 (519)
100 2oe3_A Thioredoxin-3; electron 99.6 2.7E-15 9.3E-20 117.3 7.1 99 280-386 13-114 (114)
101 1qgv_A Spliceosomal protein U5 99.6 1.1E-14 3.7E-19 118.5 10.7 102 285-388 10-121 (142)
102 2wz9_A Glutaredoxin-3; protein 99.6 1.5E-14 5E-19 119.6 11.4 108 278-392 11-122 (153)
103 2l6c_A Thioredoxin; oxidoreduc 99.6 3.2E-15 1.1E-19 116.2 6.6 100 282-389 6-107 (110)
104 2l57_A Uncharacterized protein 99.5 1.2E-14 3.9E-19 116.0 8.9 94 294-392 23-121 (126)
105 2j23_A Thioredoxin; immune pro 99.5 5.7E-15 2E-19 116.8 6.8 103 279-387 15-120 (121)
106 3emx_A Thioredoxin; structural 99.5 2E-15 6.7E-20 122.0 4.2 103 278-390 15-128 (135)
107 2yj7_A LPBCA thioredoxin; oxid 99.3 4.9E-16 1.7E-20 119.7 0.0 101 281-386 3-105 (106)
108 2f51_A Thioredoxin; electron t 99.5 1.1E-14 3.7E-19 114.7 7.8 104 280-390 4-115 (118)
109 1ti3_A Thioredoxin H, PTTRXH1; 99.5 8.1E-15 2.8E-19 114.4 6.9 102 279-387 4-111 (113)
110 3d22_A TRXH4, thioredoxin H-ty 99.5 1.7E-14 5.7E-19 117.1 8.9 105 278-389 23-133 (139)
111 2vm1_A Thioredoxin, thioredoxi 99.5 1.6E-14 5.5E-19 113.6 8.3 103 279-388 6-114 (118)
112 2qc7_A ERP31, ERP28, endoplasm 99.5 4.5E-14 1.5E-18 124.3 11.8 103 279-387 5-118 (240)
113 1zma_A Bacterocin transport ac 99.5 1.2E-14 4.2E-19 114.4 6.4 97 281-385 14-118 (118)
114 3cxg_A Putative thioredoxin; m 99.5 1.7E-14 5.8E-19 116.1 6.4 104 278-389 19-130 (133)
115 3qcp_A QSOX from trypanosoma b 99.5 8E-15 2.7E-19 140.3 4.2 101 278-379 22-131 (470)
116 2djk_A PDI, protein disulfide- 99.5 1.7E-13 5.7E-18 110.2 10.7 106 280-393 7-120 (133)
117 3t58_A Sulfhydryl oxidase 1; o 99.5 3.3E-13 1.1E-17 132.6 12.4 114 278-391 11-130 (519)
118 2kuc_A Putative disulphide-iso 99.4 1.6E-13 5.6E-18 109.8 6.5 103 284-391 11-124 (130)
119 1wmj_A Thioredoxin H-type; str 99.4 3.1E-14 1.1E-18 114.1 2.0 106 278-390 13-124 (130)
120 1fo5_A Thioredoxin; disulfide 99.4 7.6E-13 2.6E-17 97.3 9.3 81 298-387 3-85 (85)
121 1wou_A Thioredoxin -related pr 99.4 2.7E-13 9.1E-18 107.5 7.3 99 281-385 7-122 (123)
122 3fk8_A Disulphide isomerase; A 99.4 3.3E-13 1.1E-17 108.5 7.0 87 295-386 27-131 (133)
123 2fwh_A Thiol:disulfide interch 99.4 6.8E-13 2.3E-17 106.8 8.8 99 285-387 18-127 (134)
124 2hls_A Protein disulfide oxido 99.4 6.8E-12 2.3E-16 111.6 15.9 195 50-262 10-227 (243)
125 1nho_A Probable thioredoxin; b 99.4 8.7E-13 3E-17 96.9 7.8 80 299-387 3-84 (85)
126 2h8l_A Protein disulfide-isome 99.4 1.5E-11 5.2E-16 110.2 16.9 212 148-393 3-235 (252)
127 3dml_A Putative uncharacterize 99.4 6.1E-13 2.1E-17 102.3 6.5 87 296-388 17-110 (116)
128 3f9u_A Putative exported cytoc 99.3 1.4E-12 4.8E-17 109.8 8.0 99 284-387 31-165 (172)
129 3iv4_A Putative oxidoreductase 99.3 1.7E-12 5.7E-17 98.4 5.1 96 281-383 8-111 (112)
130 3h79_A Thioredoxin-like protei 99.3 1.5E-11 5.2E-16 97.8 11.0 105 150-259 14-126 (127)
131 2lst_A Thioredoxin; structural 99.0 2.5E-13 8.4E-18 108.8 0.0 93 295-392 17-120 (130)
132 3ec3_A Protein disulfide-isome 99.3 1.7E-10 5.8E-15 103.1 17.0 210 149-394 4-234 (250)
133 2dml_A Protein disulfide-isome 99.2 7.4E-11 2.5E-15 94.1 11.8 106 151-261 17-124 (130)
134 2ju5_A Thioredoxin disulfide i 99.2 1.7E-11 5.8E-16 101.1 8.3 87 296-388 46-152 (154)
135 3tco_A Thioredoxin (TRXA-1); d 99.2 3.2E-11 1.1E-15 92.9 8.7 105 150-260 3-108 (109)
136 2dj1_A Protein disulfide-isome 99.2 9.9E-11 3.4E-15 94.7 11.5 108 151-265 17-128 (140)
137 2voc_A Thioredoxin; electron t 99.2 8.9E-11 3E-15 91.1 10.3 103 153-262 3-106 (112)
138 3ga4_A Dolichyl-diphosphooligo 99.2 1.1E-10 3.9E-15 97.0 11.1 117 142-263 9-155 (178)
139 3die_A Thioredoxin, TRX; elect 99.2 8.9E-11 3.1E-15 89.9 9.9 102 151-259 3-105 (106)
140 3kp8_A Vkorc1/thioredoxin doma 99.2 7.3E-12 2.5E-16 96.0 3.5 74 297-386 12-93 (106)
141 2b5x_A YKUV protein, TRXY; thi 99.2 8.9E-11 3.1E-15 95.7 10.1 102 282-389 15-146 (148)
142 2trx_A Thioredoxin; electron t 99.2 1.4E-10 4.9E-15 89.1 10.7 103 152-260 3-107 (108)
143 1lu4_A Soluble secreted antige 99.2 1.2E-10 4.2E-15 93.4 10.2 98 282-387 10-135 (136)
144 3gnj_A Thioredoxin domain prot 99.2 6E-11 2E-15 91.7 8.0 104 152-261 5-110 (111)
145 1nsw_A Thioredoxin, TRX; therm 99.2 6.9E-11 2.4E-15 90.4 8.2 102 153-260 2-104 (105)
146 1un2_A DSBA, thiol-disulfide i 99.2 6.4E-12 2.2E-16 107.7 2.5 115 215-343 41-160 (197)
147 3ph9_A Anterior gradient prote 99.2 8.4E-11 2.9E-15 95.8 8.9 88 295-387 42-144 (151)
148 1x5d_A Protein disulfide-isome 99.2 1.7E-10 5.8E-15 92.4 10.5 108 151-264 7-120 (133)
149 1thx_A Thioredoxin, thioredoxi 99.2 1.9E-10 6.6E-15 89.4 10.5 106 151-262 7-114 (115)
150 3hz4_A Thioredoxin; NYSGXRC, P 99.2 2.8E-11 9.6E-16 98.1 5.7 109 150-264 5-115 (140)
151 2yzu_A Thioredoxin; redox prot 99.1 9.9E-11 3.4E-15 90.1 8.2 103 153-261 3-106 (109)
152 1sen_A Thioredoxin-like protei 99.1 4.4E-11 1.5E-15 99.6 6.6 89 295-388 44-148 (164)
153 3hxs_A Thioredoxin, TRXP; elec 99.1 1.5E-10 5E-15 93.8 9.5 105 151-261 22-139 (141)
154 3or5_A Thiol:disulfide interch 99.1 1.8E-10 6.3E-15 95.9 10.3 105 281-390 19-153 (165)
155 2o8v_B Thioredoxin 1; disulfid 99.1 1.9E-10 6.5E-15 91.5 9.8 103 152-260 23-127 (128)
156 2c0g_A ERP29 homolog, windbeut 99.1 3.1E-10 1.1E-14 100.2 12.0 147 151-327 16-174 (248)
157 1zzo_A RV1677; thioredoxin fol 99.1 2.5E-10 8.6E-15 91.5 10.5 101 281-388 10-135 (136)
158 1ilo_A Conserved hypothetical 99.1 5.3E-11 1.8E-15 85.4 5.8 73 301-383 3-76 (77)
159 3p2a_A Thioredoxin 2, putative 99.1 2.4E-10 8.3E-15 93.4 10.4 106 151-262 38-144 (148)
160 2i4a_A Thioredoxin; acidophIle 99.1 2.5E-10 8.6E-15 87.5 9.9 102 152-259 3-106 (107)
161 2f9s_A Thiol-disulfide oxidore 99.1 1.7E-10 5.7E-15 94.7 9.2 93 296-392 25-142 (151)
162 2e0q_A Thioredoxin; electron t 99.1 1.8E-10 6.1E-15 87.7 8.6 102 153-261 1-103 (104)
163 3raz_A Thioredoxin-related pro 99.1 1.7E-10 5.8E-15 94.7 8.8 91 296-390 23-142 (151)
164 2djj_A PDI, protein disulfide- 99.1 6.2E-10 2.1E-14 87.5 11.8 105 150-262 6-118 (121)
165 2ppt_A Thioredoxin-2; thiredox 99.1 1.7E-10 5.9E-15 95.0 8.6 105 152-262 48-153 (155)
166 1mek_A Protein disulfide isome 99.1 3.2E-10 1.1E-14 88.8 9.5 105 152-261 8-117 (120)
167 1x5e_A Thioredoxin domain cont 99.1 3.8E-10 1.3E-14 89.4 10.0 108 150-266 6-115 (126)
168 2dj3_A Protein disulfide-isome 99.1 4E-10 1.4E-14 90.2 10.2 109 150-263 6-120 (133)
169 1z6n_A Hypothetical protein PA 99.1 5.8E-11 2E-15 98.7 5.2 65 296-363 53-122 (167)
170 1w4v_A Thioredoxin, mitochondr 99.1 2.2E-10 7.6E-15 89.8 8.4 104 151-260 13-118 (119)
171 3erw_A Sporulation thiol-disul 99.1 2.4E-10 8.3E-15 92.8 8.8 85 296-384 33-145 (145)
172 1hyu_A AHPF, alkyl hydroperoxi 99.1 6.9E-10 2.4E-14 110.1 13.5 176 170-386 20-198 (521)
173 2l5l_A Thioredoxin; structural 99.1 3.8E-10 1.3E-14 90.8 9.5 106 152-263 10-128 (136)
174 1jfu_A Thiol:disulfide interch 99.1 6.8E-10 2.3E-14 94.5 11.6 138 248-390 12-182 (186)
175 3qfa_C Thioredoxin; protein-pr 99.1 2E-10 6.9E-15 89.7 7.5 102 151-260 12-116 (116)
176 2h30_A Thioredoxin, peptide me 99.1 1.9E-10 6.5E-15 95.7 7.9 105 280-389 22-157 (164)
177 2l57_A Uncharacterized protein 99.1 6.5E-10 2.2E-14 88.1 10.6 106 152-262 5-118 (126)
178 1v98_A Thioredoxin; oxidoreduc 99.1 3.4E-10 1.2E-14 91.6 8.9 106 151-262 33-139 (140)
179 1oaz_A Thioredoxin 1; immune s 99.1 1.8E-10 6.2E-15 90.9 7.0 103 152-260 4-122 (123)
180 1dby_A Chloroplast thioredoxin 99.1 3.8E-10 1.3E-14 86.5 8.7 102 153-260 3-106 (107)
181 1t00_A Thioredoxin, TRX; redox 99.1 6E-10 2.1E-14 86.2 9.7 104 152-261 6-111 (112)
182 4euy_A Uncharacterized protein 99.1 3.9E-10 1.3E-14 86.3 8.4 97 157-260 7-104 (105)
183 3ewl_A Uncharacterized conserv 99.1 7E-10 2.4E-14 89.8 10.1 87 296-388 26-141 (142)
184 2i1u_A Thioredoxin, TRX, MPT46 99.1 4E-10 1.4E-14 88.5 8.4 106 150-261 11-118 (121)
185 1fb6_A Thioredoxin M; electron 99.1 6.1E-10 2.1E-14 85.0 9.1 102 153-260 2-105 (105)
186 3aps_A DNAJ homolog subfamily 99.1 2.2E-10 7.5E-15 90.2 6.5 104 152-261 4-113 (122)
187 3ia1_A THIO-disulfide isomeras 99.1 3.7E-10 1.3E-14 92.9 8.1 86 298-390 31-146 (154)
188 3dxb_A Thioredoxin N-terminall 99.1 9.9E-10 3.4E-14 96.3 11.2 109 150-264 11-121 (222)
189 3zzx_A Thioredoxin; oxidoreduc 99.0 3.9E-10 1.3E-14 86.1 7.5 94 158-259 8-104 (105)
190 2qsi_A Putative hydrogenase ex 99.0 5.9E-10 2E-14 88.1 8.5 103 153-261 17-123 (137)
191 2lja_A Putative thiol-disulfid 99.0 5.9E-10 2E-14 91.4 8.9 91 296-390 29-145 (152)
192 3apq_A DNAJ homolog subfamily 99.0 6.6E-10 2.2E-14 96.6 9.6 109 150-264 96-205 (210)
193 3uvt_A Thioredoxin domain-cont 99.0 9.3E-10 3.2E-14 84.9 9.3 102 151-259 5-110 (111)
194 2fgx_A Putative thioredoxin; N 99.0 2E-10 6.7E-15 87.1 5.1 75 299-383 30-106 (107)
195 1ttz_A Conserved hypothetical 99.0 1.8E-10 6.3E-15 84.2 4.6 74 301-389 3-78 (87)
196 3ul3_B Thioredoxin, thioredoxi 99.0 5.9E-10 2E-14 88.6 8.0 103 150-258 24-127 (128)
197 2l5o_A Putative thioredoxin; s 99.0 1.2E-09 4.2E-14 89.6 10.1 93 296-392 27-145 (153)
198 4evm_A Thioredoxin family prot 99.0 8E-10 2.7E-14 88.6 8.6 86 296-386 21-137 (138)
199 3lor_A Thiol-disulfide isomera 99.0 1.3E-09 4.4E-14 90.2 10.1 90 296-389 29-156 (160)
200 2av4_A Thioredoxin-like protei 99.0 8.7E-10 3E-14 88.5 8.5 106 153-263 23-141 (160)
201 3eyt_A Uncharacterized protein 99.0 9.4E-10 3.2E-14 90.8 8.7 90 296-389 27-153 (158)
202 3eur_A Uncharacterized protein 99.0 1.8E-09 6.2E-14 87.4 10.1 83 297-385 31-142 (142)
203 3fkf_A Thiol-disulfide oxidore 99.0 1.5E-09 5.2E-14 88.3 9.6 86 296-388 32-146 (148)
204 1xwb_A Thioredoxin; dimerizati 99.0 1.3E-09 4.4E-14 83.3 8.5 100 153-259 2-105 (106)
205 2wz9_A Glutaredoxin-3; protein 99.0 9.2E-10 3.1E-14 90.5 8.1 125 151-293 12-140 (153)
206 1r26_A Thioredoxin; redox-acti 99.0 8.8E-10 3E-14 87.2 7.7 102 152-261 20-123 (125)
207 3gl3_A Putative thiol:disulfid 99.0 1.7E-09 5.9E-14 88.6 9.5 92 296-391 27-145 (152)
208 1ep7_A Thioredoxin CH1, H-type 99.0 8.6E-10 2.9E-14 85.3 7.1 102 153-261 4-111 (112)
209 2pu9_C TRX-F, thioredoxin F-ty 99.0 3.2E-09 1.1E-13 81.9 10.3 104 150-260 4-110 (111)
210 2qgv_A Hydrogenase-1 operon pr 99.0 3.7E-10 1.3E-14 89.6 4.9 104 152-261 18-125 (140)
211 3qou_A Protein YBBN; thioredox 99.0 1.7E-09 5.7E-14 98.9 10.0 106 150-261 6-114 (287)
212 2vlu_A Thioredoxin, thioredoxi 99.0 1.3E-09 4.5E-14 85.7 7.6 105 150-262 12-121 (122)
213 3hcz_A Possible thiol-disulfid 99.0 8.9E-10 3.1E-14 89.7 6.6 88 296-387 30-145 (148)
214 1gh2_A Thioredoxin-like protei 98.9 3.7E-09 1.3E-13 81.0 9.4 97 156-260 7-106 (107)
215 3f3q_A Thioredoxin-1; His TAG, 98.9 2.4E-09 8.1E-14 82.5 8.3 98 154-259 10-108 (109)
216 1syr_A Thioredoxin; SGPP, stru 98.9 1.6E-09 5.5E-14 83.9 7.1 102 151-260 9-111 (112)
217 3d6i_A Monothiol glutaredoxin- 98.9 3.3E-09 1.1E-13 82.0 8.8 102 153-261 2-109 (112)
218 3lwa_A Secreted thiol-disulfid 98.9 1.9E-09 6.5E-14 91.4 8.1 89 296-388 58-181 (183)
219 2qc7_A ERP31, ERP28, endoplasm 98.9 5.1E-09 1.8E-13 92.0 10.9 105 151-260 5-118 (240)
220 2l6c_A Thioredoxin; oxidoreduc 98.9 2.3E-09 7.7E-14 82.7 7.5 102 153-262 5-107 (110)
221 3kcm_A Thioredoxin family prot 98.9 3.8E-09 1.3E-13 86.7 9.2 90 296-389 27-144 (154)
222 2es7_A Q8ZP25_salty, putative 98.9 1.4E-09 4.8E-14 87.8 6.3 104 152-262 18-126 (142)
223 3m9j_A Thioredoxin; oxidoreduc 98.9 1.9E-09 6.6E-14 82.2 6.8 96 157-260 7-105 (105)
224 3ira_A Conserved protein; meth 98.9 1.2E-09 4.2E-14 90.8 5.9 75 287-364 30-118 (173)
225 2vim_A Thioredoxin, TRX; thior 98.9 3.6E-09 1.2E-13 80.4 8.2 99 154-260 2-104 (104)
226 2b1k_A Thiol:disulfide interch 98.9 1E-09 3.5E-14 91.7 5.5 99 281-387 33-159 (168)
227 2j23_A Thioredoxin; immune pro 98.9 3.2E-09 1.1E-13 83.5 8.0 102 152-260 16-120 (121)
228 2lrn_A Thiol:disulfide interch 98.9 4.6E-09 1.6E-13 86.1 9.3 88 296-390 28-143 (152)
229 3hdc_A Thioredoxin family prot 98.9 5E-09 1.7E-13 86.5 9.5 89 296-388 40-152 (158)
230 2xc2_A Thioredoxinn; oxidoredu 98.9 4.2E-09 1.4E-13 82.2 8.4 99 153-260 15-117 (117)
231 3ha9_A Uncharacterized thiored 98.9 6E-09 2.1E-13 86.6 9.8 85 296-388 36-164 (165)
232 1faa_A Thioredoxin F; electron 98.9 1.2E-08 4.2E-13 80.3 10.1 105 149-260 16-123 (124)
233 2dlx_A UBX domain-containing p 98.9 5.9E-09 2E-13 84.9 8.3 96 287-388 29-136 (153)
234 3gix_A Thioredoxin-like protei 98.9 4.5E-09 1.5E-13 85.8 7.4 101 157-263 10-123 (149)
235 2lrt_A Uncharacterized protein 98.8 6.4E-09 2.2E-13 85.3 8.2 85 296-384 34-144 (152)
236 2hyx_A Protein DIPZ; thioredox 98.8 6.1E-09 2.1E-13 97.1 8.7 89 296-388 81-199 (352)
237 1kng_A Thiol:disulfide interch 98.8 3.4E-09 1.2E-13 87.1 5.7 85 296-387 41-151 (156)
238 3s9f_A Tryparedoxin; thioredox 98.8 1.4E-08 4.6E-13 84.6 8.9 65 296-360 47-137 (165)
239 2ywi_A Hypothetical conserved 98.8 5.9E-09 2E-13 89.4 6.8 88 298-389 47-175 (196)
240 1xfl_A Thioredoxin H1; AT3G510 98.8 8.9E-09 3E-13 81.2 7.3 101 152-260 17-123 (124)
241 1i5g_A Tryparedoxin II; electr 98.8 1.2E-08 4.2E-13 82.6 8.2 83 281-364 13-123 (144)
242 3emx_A Thioredoxin; structural 98.8 4.6E-09 1.6E-13 84.3 5.6 102 152-263 17-128 (135)
243 2oe3_A Thioredoxin-3; electron 98.8 5E-09 1.7E-13 81.4 5.5 98 153-258 14-113 (114)
244 1qgv_A Spliceosomal protein U5 98.8 9.2E-09 3.1E-13 83.2 7.3 101 158-263 11-123 (142)
245 2dj0_A Thioredoxin-related tra 98.8 1.2E-09 4.3E-14 87.9 2.0 102 151-258 7-118 (137)
246 1o8x_A Tryparedoxin, TRYX, TXN 98.8 1.9E-08 6.4E-13 81.8 8.6 68 296-363 27-122 (146)
247 2yj7_A LPBCA thioredoxin; oxid 98.2 7.8E-10 2.7E-14 84.4 0.0 101 153-259 3-105 (106)
248 1fo5_A Thioredoxin; disulfide 98.8 4.4E-08 1.5E-12 71.3 9.2 81 170-260 4-85 (85)
249 1o73_A Tryparedoxin; electron 98.7 2.1E-08 7.3E-13 81.1 7.9 68 296-363 27-122 (144)
250 2vm1_A Thioredoxin, thioredoxi 98.7 2E-08 6.9E-13 78.2 7.4 102 152-261 7-114 (118)
251 2kuc_A Putative disulphide-iso 98.7 1.9E-08 6.4E-13 80.0 7.3 106 154-262 9-122 (130)
252 1ti3_A Thioredoxin H, PTTRXH1; 98.7 1.3E-08 4.6E-13 78.6 6.3 101 153-261 6-112 (113)
253 3d22_A TRXH4, thioredoxin H-ty 98.7 1.8E-08 6.1E-13 81.2 7.1 101 155-263 29-134 (139)
254 2cvb_A Probable thiol-disulfid 98.7 3.9E-08 1.3E-12 83.6 9.5 94 296-391 32-162 (188)
255 3fw2_A Thiol-disulfide oxidore 98.7 6.5E-08 2.2E-12 78.9 10.4 85 296-387 32-147 (150)
256 1zma_A Bacterocin transport ac 98.7 7.2E-09 2.5E-13 80.9 3.9 103 152-257 13-117 (118)
257 4fo5_A Thioredoxin-like protei 98.7 4.1E-08 1.4E-12 79.4 8.3 83 296-385 31-142 (143)
258 3u5r_E Uncharacterized protein 98.7 6.2E-08 2.1E-12 84.5 9.4 89 297-391 58-190 (218)
259 2f51_A Thioredoxin; electron t 98.7 2.2E-08 7.4E-13 78.2 5.8 103 152-261 4-113 (118)
260 3kh7_A Thiol:disulfide interch 98.7 2.4E-08 8.4E-13 84.0 6.4 85 296-388 57-167 (176)
261 3cxg_A Putative thioredoxin; m 98.7 3.3E-08 1.1E-12 79.0 6.8 102 152-261 21-129 (133)
262 3kp9_A Vkorc1/thioredoxin doma 98.7 4.8E-09 1.6E-13 94.4 2.0 73 299-387 199-279 (291)
263 3fk8_A Disulphide isomerase; A 98.7 4.2E-08 1.4E-12 78.3 7.4 93 166-260 27-132 (133)
264 1nho_A Probable thioredoxin; b 98.7 5.2E-08 1.8E-12 70.9 7.3 80 171-260 4-84 (85)
265 2ls5_A Uncharacterized protein 98.1 2.7E-09 9.1E-14 88.2 0.0 89 296-388 32-148 (159)
266 1wou_A Thioredoxin -related pr 98.7 3.5E-08 1.2E-12 77.7 6.3 101 151-258 5-122 (123)
267 1wjk_A C330018D20RIK protein; 98.6 3.3E-08 1.1E-12 74.6 5.2 78 297-388 15-96 (100)
268 2dbc_A PDCL2, unnamed protein 98.6 1.6E-07 5.6E-12 75.1 9.6 100 150-259 9-119 (135)
269 2k6v_A Putative cytochrome C o 98.6 2.9E-08 9.9E-13 83.0 4.7 88 296-386 34-171 (172)
270 3evi_A Phosducin-like protein 98.6 1.6E-07 5.5E-12 72.9 8.5 100 150-258 2-111 (118)
271 1wmj_A Thioredoxin H-type; str 98.6 2.5E-08 8.4E-13 79.2 3.6 102 153-262 16-123 (130)
272 3qcp_A QSOX from trypanosoma b 98.6 3.3E-08 1.1E-12 94.7 5.1 109 151-264 23-155 (470)
273 2fwh_A Thiol:disulfide interch 98.6 8.5E-08 2.9E-12 76.6 6.8 99 159-260 20-127 (134)
274 3dwv_A Glutathione peroxidase- 98.6 2.4E-07 8.2E-12 78.6 9.6 89 296-388 45-183 (187)
275 2rli_A SCO2 protein homolog, m 98.6 1.4E-07 4.9E-12 78.7 8.1 89 297-388 26-164 (171)
276 2ggt_A SCO1 protein homolog, m 98.6 1.5E-07 5E-12 78.0 7.9 90 296-388 22-161 (164)
277 2lus_A Thioredoxion; CR-Trp16, 98.0 8.2E-09 2.8E-13 83.5 0.0 68 297-364 25-122 (143)
278 2e7p_A Glutaredoxin; thioredox 98.5 1.9E-08 6.3E-13 78.3 1.8 78 298-387 20-107 (116)
279 3drn_A Peroxiredoxin, bacterio 98.5 2.1E-07 7.3E-12 76.8 8.4 86 297-386 28-147 (161)
280 2p5q_A Glutathione peroxidase 98.5 1.9E-07 6.7E-12 77.7 7.9 89 296-388 31-168 (170)
281 3cmi_A Peroxiredoxin HYR1; thi 98.5 1.4E-07 4.8E-12 78.8 7.0 88 296-388 31-168 (171)
282 2v1m_A Glutathione peroxidase; 98.5 1E-07 3.5E-12 79.3 6.0 89 296-388 30-167 (169)
283 2vup_A Glutathione peroxidase- 98.5 1.7E-07 5.7E-12 79.9 6.6 89 296-388 47-185 (190)
284 2obi_A PHGPX, GPX-4, phospholi 98.5 3.2E-07 1.1E-11 77.5 8.1 87 296-386 46-182 (183)
285 2lst_A Thioredoxin; structural 97.9 1.6E-08 5.6E-13 80.3 0.0 102 159-263 10-118 (130)
286 2b5x_A YKUV protein, TRXY; thi 98.5 8E-07 2.7E-11 71.9 10.0 104 157-262 18-146 (148)
287 2p31_A CL683, glutathione pero 98.5 4E-07 1.4E-11 76.8 8.1 88 296-387 48-180 (181)
288 1ego_A Glutaredoxin; electron 98.5 1.7E-07 5.9E-12 68.2 5.0 73 301-387 3-83 (85)
289 2k8s_A Thioredoxin; dimer, str 98.4 3.4E-08 1.2E-12 71.2 0.9 59 300-362 3-64 (80)
290 2f8a_A Glutathione peroxidase 98.4 5.4E-07 1.8E-11 77.8 8.2 44 296-340 46-89 (208)
291 1zzo_A RV1677; thioredoxin fol 98.4 1.9E-06 6.6E-11 68.4 10.5 91 167-261 24-135 (136)
292 1lu4_A Soluble secreted antige 98.4 2.2E-06 7.6E-11 68.1 10.7 90 167-260 23-135 (136)
293 2ju5_A Thioredoxin disulfide i 98.4 8.1E-07 2.8E-11 72.7 8.2 92 167-261 46-152 (154)
294 1we0_A Alkyl hydroperoxide red 98.4 4E-07 1.4E-11 77.2 6.2 89 296-388 30-157 (187)
295 2bmx_A Alkyl hydroperoxidase C 98.4 5.6E-07 1.9E-11 76.9 7.1 88 297-388 45-170 (195)
296 1xvw_A Hypothetical protein RV 98.4 5.7E-07 2E-11 74.1 6.6 85 298-386 37-158 (160)
297 3iv4_A Putative oxidoreductase 98.3 2.1E-07 7.1E-12 70.4 3.1 93 157-256 13-111 (112)
298 1zof_A Alkyl hydroperoxide-red 98.3 4.5E-07 1.5E-11 77.7 5.5 88 296-387 32-160 (198)
299 3f9u_A Putative exported cytoc 98.3 1.4E-06 4.7E-11 72.8 8.3 102 155-261 30-166 (172)
300 2trc_P Phosducin, MEKA, PP33; 98.3 3.6E-07 1.2E-11 79.3 4.7 102 150-259 98-211 (217)
301 3kij_A Probable glutathione pe 98.3 1.5E-06 5E-11 73.2 8.3 45 296-341 37-81 (180)
302 3or5_A Thiol:disulfide interch 98.3 4.2E-06 1.4E-10 69.0 10.7 93 167-264 33-154 (165)
303 2l5o_A Putative thioredoxin; s 98.3 5.3E-06 1.8E-10 67.5 10.9 99 167-267 27-147 (153)
304 3erw_A Sporulation thiol-disul 98.3 2.1E-06 7.1E-11 69.1 8.1 88 167-257 33-145 (145)
305 2gs3_A PHGPX, GPX-4, phospholi 98.3 1.4E-06 4.9E-11 73.7 7.3 44 296-340 48-91 (185)
306 3raz_A Thioredoxin-related pro 98.3 4.8E-06 1.6E-10 67.7 10.2 97 167-265 23-144 (151)
307 1a0r_P Phosducin, MEKA, PP33; 98.3 1.3E-06 4.3E-11 76.9 6.8 102 150-259 111-224 (245)
308 2f9s_A Thiol-disulfide oxidore 98.2 5.1E-06 1.8E-10 67.5 9.7 97 167-265 25-142 (151)
309 2lja_A Putative thiol-disulfid 98.2 5.8E-06 2E-10 67.2 10.0 95 167-263 29-145 (152)
310 1h75_A Glutaredoxin-like prote 98.2 7.1E-07 2.4E-11 64.2 3.6 71 301-388 3-78 (81)
311 1qmv_A Human thioredoxin perox 98.2 2.3E-06 8E-11 73.1 7.5 88 296-387 33-162 (197)
312 1xzo_A BSSCO, hypothetical pro 98.2 5E-06 1.7E-10 69.3 9.3 91 296-389 32-173 (174)
313 1hyu_A AHPF, alkyl hydroperoxi 98.2 3.3E-05 1.1E-09 76.4 16.2 181 55-259 8-198 (521)
314 1sen_A Thioredoxin-like protei 98.2 8.4E-07 2.9E-11 73.5 3.5 98 162-261 40-148 (164)
315 2l4c_A Endoplasmic reticulum r 98.2 5.2E-06 1.8E-10 64.8 7.6 96 281-387 23-123 (124)
316 1ilo_A Conserved hypothetical 98.1 9.8E-06 3.3E-10 57.3 7.9 72 172-256 3-76 (77)
317 3kp8_A Vkorc1/thioredoxin doma 98.1 2E-06 6.8E-11 65.4 4.2 76 169-258 13-92 (106)
318 3hcz_A Possible thiol-disulfid 98.1 1.4E-05 4.7E-10 64.4 9.6 89 167-260 30-145 (148)
319 1r7h_A NRDH-redoxin; thioredox 98.1 6.2E-06 2.1E-10 58.1 6.3 67 301-384 3-74 (75)
320 4evm_A Thioredoxin family prot 98.1 1.7E-05 5.9E-10 62.7 9.7 91 167-259 21-137 (138)
321 2h30_A Thioredoxin, peptide me 98.1 3.9E-06 1.3E-10 69.2 5.7 108 152-261 22-156 (164)
322 3ha9_A Uncharacterized thiored 98.1 2.1E-05 7.3E-10 64.8 10.1 91 167-262 36-165 (165)
323 1uul_A Tryparedoxin peroxidase 98.1 6.3E-06 2.2E-10 70.7 7.1 87 297-387 36-164 (202)
324 3lor_A Thiol-disulfide isomera 98.1 1.7E-05 5.7E-10 65.0 9.4 94 167-262 29-156 (160)
325 2h01_A 2-Cys peroxiredoxin; th 98.1 5.2E-06 1.8E-10 70.6 6.2 88 296-387 30-158 (192)
326 3fkf_A Thiol-disulfide oxidore 98.1 2.4E-05 8.2E-10 63.0 10.0 90 167-261 32-146 (148)
327 1zye_A Thioredoxin-dependent p 98.0 8.1E-06 2.8E-10 71.0 7.3 87 297-387 56-184 (220)
328 3gyk_A 27KDA outer membrane pr 98.0 7.2E-06 2.5E-10 68.5 6.7 80 297-387 22-172 (175)
329 1eej_A Thiol:disulfide interch 98.0 7.3E-06 2.5E-10 71.1 6.9 80 296-387 85-210 (216)
330 3gl3_A Putative thiol:disulfid 98.0 1.9E-05 6.4E-10 64.1 9.0 96 167-264 27-145 (152)
331 3ia1_A THIO-disulfide isomeras 98.0 9.7E-06 3.3E-10 66.0 7.1 92 169-264 31-147 (154)
332 1nm3_A Protein HI0572; hybrid, 98.0 2.3E-05 8E-10 69.1 9.9 52 298-357 169-225 (241)
333 3ztl_A Thioredoxin peroxidase; 98.0 1.5E-05 5.2E-10 69.4 8.4 87 296-386 68-196 (222)
334 2jsy_A Probable thiol peroxida 98.0 2.2E-05 7.4E-10 65.0 8.9 86 296-387 43-166 (167)
335 2i81_A 2-Cys peroxiredoxin; st 98.0 1.1E-05 3.8E-10 69.8 7.0 88 296-387 51-179 (213)
336 3eyt_A Uncharacterized protein 98.0 2.9E-05 1E-09 63.4 8.8 94 167-262 27-153 (158)
337 3kcm_A Thioredoxin family prot 97.9 3.7E-05 1.3E-09 62.5 9.1 96 167-264 27-146 (154)
338 2lrn_A Thiol:disulfide interch 97.9 4.4E-05 1.5E-09 61.9 9.6 93 167-264 28-144 (152)
339 3dml_A Putative uncharacterize 97.9 8.9E-06 3E-10 62.3 4.9 86 169-261 19-110 (116)
340 1t3b_A Thiol:disulfide interch 97.9 1.3E-05 4.3E-10 69.3 6.3 79 296-386 85-209 (211)
341 2b7k_A SCO1 protein; metalloch 97.9 1.1E-05 3.8E-10 69.0 5.9 46 296-341 40-88 (200)
342 3gkn_A Bacterioferritin comigr 97.9 2.2E-05 7.5E-10 64.6 7.4 87 297-387 35-161 (163)
343 1kng_A Thiol:disulfide interch 97.9 3.2E-05 1.1E-09 63.0 8.2 91 167-261 41-152 (156)
344 2dlx_A UBX domain-containing p 97.9 6.5E-05 2.2E-09 60.8 9.2 93 166-262 40-137 (153)
345 3lwa_A Secreted thiol-disulfid 97.9 7.3E-05 2.5E-09 62.7 9.7 91 167-261 58-181 (183)
346 2ywi_A Hypothetical conserved 97.8 6.8E-05 2.3E-09 63.7 9.1 93 170-264 48-177 (196)
347 2i3y_A Epididymal secretory gl 97.8 9.2E-05 3.1E-09 63.9 9.9 43 296-340 55-97 (215)
348 1kte_A Thioltransferase; redox 97.8 4.7E-06 1.6E-10 63.2 1.4 78 300-387 13-102 (105)
349 1xvq_A Thiol peroxidase; thior 97.8 7.1E-05 2.4E-09 62.4 8.7 85 296-387 43-167 (175)
350 2hze_A Glutaredoxin-1; thiored 97.8 2.7E-06 9.4E-11 65.6 -0.3 80 298-387 18-109 (114)
351 2b1k_A Thiol:disulfide interch 97.8 4.3E-05 1.5E-09 63.1 6.8 91 166-261 49-160 (168)
352 3bj5_A Protein disulfide-isome 97.7 0.00014 4.9E-09 58.5 9.3 111 279-394 14-133 (147)
353 3fw2_A Thiol-disulfide oxidore 97.7 0.00018 6.2E-09 58.0 10.1 90 167-261 32-148 (150)
354 2cvb_A Probable thiol-disulfid 97.7 0.00011 3.8E-09 61.9 9.1 96 167-264 32-162 (188)
355 2lqo_A Putative glutaredoxin R 97.7 6.2E-05 2.1E-09 55.1 5.7 75 300-390 5-86 (92)
356 3ira_A Conserved protein; meth 97.7 4.4E-05 1.5E-09 63.2 5.3 90 144-238 13-116 (173)
357 3hdc_A Thioredoxin family prot 97.7 0.00024 8.1E-09 57.9 9.6 90 167-258 40-149 (158)
358 3h93_A Thiol:disulfide interch 97.6 4.5E-05 1.5E-09 64.7 5.2 42 296-339 24-65 (192)
359 2a4v_A Peroxiredoxin DOT5; yea 97.6 0.00016 5.3E-09 59.2 8.1 70 298-373 36-136 (159)
360 1jfu_A Thiol:disulfide interch 97.6 0.00025 8.6E-09 59.5 9.3 97 167-263 59-182 (186)
361 2lrt_A Uncharacterized protein 97.6 0.0002 7E-09 58.0 8.3 84 167-252 34-139 (152)
362 2hyx_A Protein DIPZ; thioredox 97.6 0.00015 5.3E-09 67.3 8.2 94 167-262 81-200 (352)
363 1ttz_A Conserved hypothetical 97.6 0.00011 3.6E-09 53.3 5.6 75 172-262 3-78 (87)
364 1z6n_A Hypothetical protein PA 97.6 0.00012 4E-09 60.5 6.5 75 157-237 42-121 (167)
365 3kh7_A Thiol:disulfide interch 97.6 0.00027 9.3E-09 58.9 8.8 90 167-261 57-167 (176)
366 1v58_A Thiol:disulfide interch 97.6 0.00013 4.4E-09 64.2 7.1 83 297-387 97-232 (241)
367 3ewl_A Uncharacterized conserv 97.6 0.00021 7.1E-09 57.0 7.8 89 167-260 26-140 (142)
368 2fgx_A Putative thioredoxin; N 97.6 0.00015 5.1E-09 54.6 6.3 76 170-256 30-106 (107)
369 2c0d_A Thioredoxin peroxidase 97.5 0.00016 5.3E-09 62.8 7.2 88 296-387 55-183 (221)
370 2cq9_A GLRX2 protein, glutared 97.5 2.3E-05 8E-10 61.8 1.6 74 301-387 29-114 (130)
371 3nzn_A Glutaredoxin; structura 97.5 0.00016 5.4E-09 54.4 5.9 71 297-383 20-101 (103)
372 3u5r_E Uncharacterized protein 97.5 0.00067 2.3E-08 58.7 10.7 96 168-265 58-191 (218)
373 3ixr_A Bacterioferritin comigr 97.5 0.00016 5.4E-09 60.5 6.3 86 297-386 51-176 (179)
374 3ic4_A Glutaredoxin (GRX-1); s 97.5 7.8E-05 2.7E-09 54.7 3.9 68 300-384 13-91 (92)
375 2klx_A Glutaredoxin; thioredox 97.5 0.00012 4.2E-09 53.3 4.9 54 300-363 7-65 (89)
376 1fov_A Glutaredoxin 3, GRX3; a 97.5 0.00018 6.2E-09 51.3 5.5 66 301-385 3-74 (82)
377 2ht9_A Glutaredoxin-2; thiored 97.4 1.9E-05 6.4E-10 63.7 0.0 76 301-386 51-135 (146)
378 3qmx_A Glutaredoxin A, glutare 97.4 0.00013 4.5E-09 54.4 4.4 57 297-363 14-77 (99)
379 3ph9_A Anterior gradient prote 97.4 0.00034 1.1E-08 56.5 6.9 90 165-259 41-140 (151)
380 3me7_A Putative uncharacterize 97.4 0.00085 2.9E-08 55.5 9.5 91 297-390 28-164 (170)
381 3c1r_A Glutaredoxin-1; oxidize 97.4 2E-05 6.9E-10 61.0 -0.5 57 301-364 27-93 (118)
382 3a2v_A Probable peroxiredoxin; 97.4 0.00021 7.1E-09 63.0 5.8 87 297-387 33-161 (249)
383 2ec4_A FAS-associated factor 1 97.3 0.0028 9.7E-08 52.5 12.0 99 287-387 38-167 (178)
384 1i5g_A Tryparedoxin II; electr 97.3 0.00051 1.8E-08 54.9 7.4 69 167-237 27-120 (144)
385 2rli_A SCO2 protein homolog, m 97.3 0.001 3.6E-08 54.7 9.4 94 168-261 26-164 (171)
386 2ggt_A SCO1 protein homolog, m 97.3 0.00045 1.5E-08 56.5 7.1 93 167-261 22-161 (164)
387 3cmi_A Peroxiredoxin HYR1; thi 97.3 0.00077 2.6E-08 55.7 8.5 92 167-261 31-168 (171)
388 1o8x_A Tryparedoxin, TRYX, TXN 97.3 0.00052 1.8E-08 55.0 7.2 69 167-237 27-120 (146)
389 3s9f_A Tryparedoxin; thioredox 97.3 0.00063 2.2E-08 55.9 7.9 68 167-236 47-138 (165)
390 2r37_A Glutathione peroxidase 97.3 0.00033 1.1E-08 60.0 5.9 43 296-340 37-79 (207)
391 1o73_A Tryparedoxin; electron 97.3 0.0006 2.1E-08 54.4 7.0 66 167-234 27-116 (144)
392 3kp9_A Vkorc1/thioredoxin doma 97.3 0.00024 8.3E-09 63.8 4.9 75 170-258 199-277 (291)
393 3hd5_A Thiol:disulfide interch 97.2 0.00045 1.5E-08 58.6 6.0 43 296-340 24-66 (195)
394 2znm_A Thiol:disulfide interch 97.2 0.00082 2.8E-08 56.9 7.6 41 297-339 22-62 (195)
395 3eur_A Uncharacterized protein 97.2 0.00087 3E-08 53.4 7.3 85 168-257 31-141 (142)
396 4g2e_A Peroxiredoxin; redox pr 97.2 0.00019 6.6E-09 58.6 3.4 90 296-386 29-156 (157)
397 2vup_A Glutathione peroxidase- 97.2 0.0012 4.1E-08 55.6 8.4 93 167-261 47-185 (190)
398 1q98_A Thiol peroxidase, TPX; 97.2 0.00048 1.7E-08 56.6 5.7 42 297-341 43-85 (165)
399 3dwv_A Glutathione peroxidase- 97.1 0.0029 9.8E-08 53.1 10.3 96 167-262 45-184 (187)
400 2bmx_A Alkyl hydroperoxidase C 97.1 0.0012 4E-08 55.9 7.8 95 168-264 45-173 (195)
401 4hde_A SCO1/SENC family lipopr 97.1 0.0027 9.1E-08 52.4 9.8 45 296-340 31-77 (170)
402 2khp_A Glutaredoxin; thioredox 97.1 0.00036 1.2E-08 51.1 3.8 54 300-363 7-66 (92)
403 2p5q_A Glutathione peroxidase 97.1 0.0013 4.6E-08 54.0 7.4 95 167-261 31-168 (170)
404 2yan_A Glutaredoxin-3; oxidore 97.0 0.00033 1.1E-08 52.8 3.1 53 301-363 19-82 (105)
405 3rhb_A ATGRXC5, glutaredoxin-C 97.0 9.4E-05 3.2E-09 56.7 0.0 53 301-363 21-83 (113)
406 3hz8_A Thiol:disulfide interch 97.0 0.00079 2.7E-08 57.0 5.5 44 296-341 23-66 (193)
407 2pn8_A Peroxiredoxin-4; thiore 97.0 0.00082 2.8E-08 57.8 5.6 87 297-387 48-176 (211)
408 4fo5_A Thioredoxin-like protei 97.0 0.0017 5.7E-08 51.7 7.1 87 167-258 31-142 (143)
409 2wfc_A Peroxiredoxin 5, PRDX5; 97.0 0.00077 2.6E-08 55.5 5.2 45 296-341 30-77 (167)
410 1tp9_A Peroxiredoxin, PRX D (t 97.0 0.00075 2.6E-08 55.3 5.0 45 296-341 34-81 (162)
411 2yzh_A Probable thiol peroxida 97.0 0.00069 2.4E-08 56.0 4.7 42 297-341 47-89 (171)
412 2pwj_A Mitochondrial peroxired 97.0 0.00038 1.3E-08 57.7 3.0 43 298-341 45-89 (171)
413 2v1m_A Glutathione peroxidase; 97.0 0.0038 1.3E-07 51.1 9.2 96 167-262 30-168 (169)
414 1nm3_A Protein HI0572; hybrid, 96.9 0.0011 3.6E-08 58.3 5.6 45 296-341 32-79 (241)
415 2ls5_A Uncharacterized protein 95.9 0.00015 5E-09 59.3 0.0 97 167-264 32-151 (159)
416 2k6v_A Putative cytochrome C o 96.9 0.0015 5E-08 53.8 6.2 92 167-259 34-171 (172)
417 3drn_A Peroxiredoxin, bacterio 96.9 0.0027 9.3E-08 51.7 7.7 92 168-259 28-147 (161)
418 1wjk_A C330018D20RIK protein; 96.8 0.0013 4.3E-08 49.0 4.7 79 170-261 17-96 (100)
419 3zrd_A Thiol peroxidase; oxido 96.8 0.0013 4.4E-08 56.0 5.3 43 296-341 77-120 (200)
420 1n8j_A AHPC, alkyl hydroperoxi 96.8 0.0016 5.5E-08 54.7 5.5 88 297-388 30-156 (186)
421 3msz_A Glutaredoxin 1; alpha-b 96.7 0.0022 7.6E-08 46.2 5.3 72 300-388 5-87 (89)
422 2p31_A CL683, glutathione pero 96.7 0.0026 8.9E-08 53.0 6.3 94 167-260 48-180 (181)
423 1psq_A Probable thiol peroxida 96.7 0.0016 5.3E-08 53.4 4.5 43 296-341 41-84 (163)
424 1zof_A Alkyl hydroperoxide-red 96.6 0.0025 8.4E-08 54.0 5.8 93 167-261 32-161 (198)
425 4dvc_A Thiol:disulfide interch 96.6 0.0076 2.6E-07 50.1 8.6 39 297-337 21-59 (184)
426 1we0_A Alkyl hydroperoxide red 96.6 0.0032 1.1E-07 52.7 6.2 95 167-261 30-157 (187)
427 1wik_A Thioredoxin-like protei 96.6 0.0018 6.3E-08 49.0 4.2 64 287-363 6-80 (109)
428 4gqc_A Thiol peroxidase, perox 96.6 0.00052 1.8E-08 56.4 1.2 93 295-388 31-160 (164)
429 2obi_A PHGPX, GPX-4, phospholi 96.5 0.0046 1.6E-07 51.6 6.7 93 167-259 46-182 (183)
430 3kij_A Probable glutathione pe 96.5 0.01 3.6E-07 49.2 8.9 95 167-261 37-170 (180)
431 3qpm_A Peroxiredoxin; oxidored 96.5 0.0035 1.2E-07 54.9 6.1 87 296-386 76-204 (240)
432 3uma_A Hypothetical peroxiredo 96.5 0.0026 8.8E-08 53.3 4.9 44 297-341 56-102 (184)
433 2k8s_A Thioredoxin; dimer, str 96.5 0.0015 5.2E-08 46.2 2.8 58 171-232 3-61 (80)
434 3gv1_A Disulfide interchange p 96.4 0.01 3.5E-07 47.5 7.8 80 296-389 13-140 (147)
435 3h8q_A Thioredoxin reductase 3 96.4 0.0029 9.9E-08 48.3 4.2 53 301-363 19-80 (114)
436 2lus_A Thioredoxion; CR-Trp16, 95.4 0.00054 1.8E-08 54.5 0.0 68 168-237 25-119 (143)
437 3l9v_A Putative thiol-disulfid 96.3 0.0015 5.1E-08 55.0 2.4 43 297-341 14-59 (189)
438 2f8a_A Glutathione peroxidase 96.3 0.01 3.6E-07 50.6 7.8 42 167-208 46-89 (208)
439 3p7x_A Probable thiol peroxida 96.3 0.0022 7.6E-08 52.6 3.5 85 297-385 46-165 (166)
440 2gs3_A PHGPX, GPX-4, phospholi 96.3 0.0078 2.7E-07 50.3 6.8 93 167-259 48-184 (185)
441 1xzo_A BSSCO, hypothetical pro 96.3 0.0081 2.8E-07 49.4 6.8 96 167-262 32-173 (174)
442 3mng_A Peroxiredoxin-5, mitoch 96.3 0.0045 1.5E-07 51.2 5.1 44 297-341 43-89 (173)
443 3tjj_A Peroxiredoxin-4; thiore 96.3 0.0041 1.4E-07 54.9 5.1 45 296-341 90-135 (254)
444 1xvw_A Hypothetical protein RV 96.3 0.0099 3.4E-07 48.1 7.0 89 170-258 38-157 (160)
445 1qmv_A Human thioredoxin perox 96.0 0.017 5.7E-07 48.8 7.2 94 167-260 33-162 (197)
446 3ctg_A Glutaredoxin-2; reduced 95.9 0.0026 8.9E-08 49.8 1.8 56 301-363 39-104 (129)
447 3feu_A Putative lipoprotein; a 95.9 0.0046 1.6E-07 51.7 3.4 40 297-340 22-61 (185)
448 1uul_A Tryparedoxin peroxidase 95.8 0.017 5.7E-07 49.0 6.7 93 168-260 36-164 (202)
449 1zye_A Thioredoxin-dependent p 95.8 0.021 7.2E-07 49.2 7.1 95 168-262 56-186 (220)
450 2jsy_A Probable thiol peroxida 95.7 0.055 1.9E-06 44.0 9.3 93 167-260 43-166 (167)
451 2b7k_A SCO1 protein; metalloch 95.7 0.03 1E-06 47.3 7.8 97 167-263 40-181 (200)
452 1ego_A Glutaredoxin; electron 95.7 0.0097 3.3E-07 42.3 4.0 77 172-260 3-83 (85)
453 1prx_A HORF6; peroxiredoxin, h 95.7 0.016 5.4E-07 50.1 5.9 87 299-387 34-168 (224)
454 2i81_A 2-Cys peroxiredoxin; st 95.5 0.03 1E-06 47.9 7.1 94 167-260 51-179 (213)
455 2v2g_A Peroxiredoxin 6; oxidor 95.5 0.014 4.9E-07 50.7 5.0 88 298-387 30-164 (233)
456 2e7p_A Glutaredoxin; thioredox 95.4 0.0038 1.3E-07 47.6 0.8 80 171-259 21-106 (116)
457 2h01_A 2-Cys peroxiredoxin; th 95.3 0.034 1.2E-06 46.6 6.7 94 167-260 30-158 (192)
458 3gyk_A 27KDA outer membrane pr 95.2 0.039 1.3E-06 45.3 6.8 83 170-261 24-173 (175)
459 2ct6_A SH3 domain-binding glut 95.2 0.027 9.3E-07 42.6 5.2 53 300-362 9-81 (111)
460 1z6m_A Conserved hypothetical 95.1 0.045 1.5E-06 45.0 6.7 44 297-340 27-70 (175)
461 1xcc_A 1-Cys peroxiredoxin; un 95.1 0.019 6.7E-07 49.4 4.6 87 299-387 34-165 (220)
462 1t1v_A SH3BGRL3, SH3 domain-bi 94.9 0.025 8.7E-07 41.1 4.2 52 301-362 4-69 (93)
463 2rem_A Disulfide oxidoreductas 94.9 0.038 1.3E-06 46.2 5.9 41 297-339 25-65 (193)
464 1aba_A Glutaredoxin; electron 94.9 0.022 7.5E-07 40.8 3.7 53 301-362 2-74 (87)
465 3ztl_A Thioredoxin peroxidase; 94.9 0.057 1.9E-06 46.5 7.0 93 167-259 68-196 (222)
466 2wci_A Glutaredoxin-4; redox-a 94.7 0.012 4.2E-07 46.2 2.0 54 299-362 36-99 (135)
467 3gkn_A Bacterioferritin comigr 94.2 0.11 3.7E-06 42.0 6.9 92 168-259 35-160 (163)
468 3l9s_A Thiol:disulfide interch 94.1 0.035 1.2E-06 46.6 3.7 42 297-340 21-65 (191)
469 3zyw_A Glutaredoxin-3; metal b 94.1 0.027 9.1E-07 42.6 2.6 53 300-362 17-80 (111)
470 1eej_A Thiol:disulfide interch 94.0 0.058 2E-06 46.2 5.0 83 168-260 86-210 (216)
471 1t3b_A Thiol:disulfide interch 93.5 0.14 4.9E-06 43.5 6.5 81 168-258 86-208 (211)
472 2axo_A Hypothetical protein AT 93.3 0.47 1.6E-05 41.7 9.6 80 298-389 43-144 (270)
473 3ipz_A Monothiol glutaredoxin- 93.3 0.049 1.7E-06 40.9 2.9 46 307-362 31-82 (109)
474 1un2_A DSBA, thiol-disulfide i 93.3 0.14 4.7E-06 43.1 6.0 42 168-209 113-158 (197)
475 3l4n_A Monothiol glutaredoxin- 93.3 0.044 1.5E-06 42.5 2.6 95 287-394 5-111 (127)
476 3gx8_A Monothiol glutaredoxin- 92.7 0.14 4.6E-06 39.3 4.7 55 298-362 16-83 (121)
477 1v58_A Thiol:disulfide interch 92.6 0.14 4.7E-06 44.6 5.3 86 171-261 100-233 (241)
478 1xvq_A Thiol peroxidase; thior 92.6 0.32 1.1E-05 39.7 7.3 92 167-260 43-164 (175)
479 2i3y_A Epididymal secretory gl 92.6 0.49 1.7E-05 40.3 8.6 41 167-208 55-97 (215)
480 4f82_A Thioredoxin reductase; 92.4 0.15 5.2E-06 41.8 4.8 43 298-341 49-93 (176)
481 2wem_A Glutaredoxin-related pr 92.3 0.1 3.5E-06 39.8 3.4 46 307-362 33-85 (118)
482 3keb_A Probable thiol peroxida 91.9 0.11 3.8E-06 44.5 3.5 89 297-391 48-179 (224)
483 2r37_A Glutathione peroxidase 91.7 0.6 2.1E-05 39.4 8.1 41 167-208 37-79 (207)
484 3ixr_A Bacterioferritin comigr 91.6 0.38 1.3E-05 39.5 6.5 92 168-259 51-176 (179)
485 1u6t_A SH3 domain-binding glut 91.5 0.22 7.5E-06 37.9 4.5 37 300-344 1-43 (121)
486 3sbc_A Peroxiredoxin TSA1; alp 91.3 0.45 1.5E-05 40.4 6.8 44 297-341 52-96 (216)
487 1r7h_A NRDH-redoxin; thioredox 91.1 0.3 1E-05 33.2 4.6 71 172-257 3-74 (75)
488 3c7m_A Thiol:disulfide interch 91.1 0.32 1.1E-05 40.4 5.7 42 297-340 17-59 (195)
489 2c0d_A Thioredoxin peroxidase 91.0 0.58 2E-05 40.0 7.3 95 167-261 55-184 (221)
490 2a4v_A Peroxiredoxin DOT5; yea 91.0 0.43 1.5E-05 38.2 6.2 79 171-250 37-140 (159)
491 1n8j_A AHPC, alkyl hydroperoxi 90.9 0.43 1.5E-05 39.5 6.2 94 168-261 30-156 (186)
492 3a2v_A Probable peroxiredoxin; 90.8 0.27 9.2E-06 43.0 5.0 86 176-261 42-162 (249)
493 1h75_A Glutaredoxin-like prote 90.6 0.087 3E-06 36.8 1.4 75 172-261 3-78 (81)
494 3h93_A Thiol:disulfide interch 90.2 0.52 1.8E-05 39.1 6.1 40 168-207 25-65 (192)
495 3p7x_A Probable thiol peroxida 89.7 0.69 2.3E-05 37.3 6.3 89 168-258 46-165 (166)
496 1kte_A Thioltransferase; redox 89.6 0.22 7.4E-06 36.7 3.0 57 171-232 13-74 (105)
497 1q98_A Thiol peroxidase, TPX; 89.1 0.4 1.4E-05 38.7 4.5 54 168-222 43-98 (165)
498 3me7_A Putative uncharacterize 88.7 1.1 3.9E-05 36.2 7.1 94 168-261 28-162 (170)
499 3gha_A Disulfide bond formatio 88.5 0.85 2.9E-05 38.3 6.3 44 297-340 29-73 (202)
500 2ec4_A FAS-associated factor 1 88.0 2.2 7.5E-05 34.9 8.3 90 168-260 55-167 (178)
No 1
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=100.00 E-value=3.4e-52 Score=412.59 Aligned_cols=372 Identities=29% Similarity=0.504 Sum_probs=331.5
Q ss_pred CCCcceeeeccCcccccCCCcccCccCCCCCChhHHHHHHHHhhCCCceeeCCHHHHHHHhhcCCeEEEEEecCCCcchH
Q 013976 1 MSWRTSTTFRASRRFTSSSTASIKLIMAAAPSKDAIVTWIKKKIGPGIYNITTLDEAERVLTSETKVVLGYLNSLVGSES 80 (432)
Q Consensus 1 ~~~Ptl~~f~~g~~~~~~~~~~~~~~Y~G~~~~~~i~~~l~~~~~~~~~~i~~~~~l~~~~~~~~~~vv~f~~~~~~~~~ 80 (432)
.+||||++|++|+... .|.|.++++.|++||.++++|++..+.+.++++++++.+++++|+||.+.+...+
T Consensus 74 ~~~Ptl~~~~~g~~~~---------~~~G~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~vv~~~~~~~~~~~ 144 (481)
T 3f8u_A 74 SGYPTLKIFRDGEEAG---------AYDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFISDKDASIVGFFDDSFSEAH 144 (481)
T ss_dssp CEESEEEEEETTEEEE---------ECCSCSSHHHHHHHHHHHTSCSEEEECSHHHHHHHTTSSSCEEEEEESCTTCHHH
T ss_pred CCCCEEEEEeCCceee---------eecCccCHHHHHHHHHhhcccCceecCCHHHHHHHHhcCCcEEEEEECCCccchH
Confidence 3799999999996544 4999999999999999999999999999999999999999999999988888999
Q ss_pred HHHHHHh-ccCCCceEEEeCcHHHHhHcCCCCCCCCCeEEEEe------cCCCceecccC-CCCCHHHHHHHHHhcCCCc
Q 013976 81 EVLADAS-RLEDDVNFYQTTNPDVAKIFHLDSKVNRPALVMVK------KETEKISYFAD-GKFDKSTIADFVFSNKLPL 152 (432)
Q Consensus 81 ~~f~~~a-~~~~~~~F~~~~~~~~~~~~~~~~~~~~p~i~l~~------~~~~~~~~y~~-g~~~~~~l~~fi~~~~~p~ 152 (432)
+.|.++| .+++++.|+++++.++++++++.. +.+++|+ ..++....| . |.++.++|.+||..++.|+
T Consensus 145 ~~f~~~a~~~~~~~~F~~~~~~~~~~~~~v~~----~~i~~~~p~~~~~~~~~~~~~y-~~~~~~~~~l~~fi~~~~~p~ 219 (481)
T 3f8u_A 145 SEFLKAASNLRDNYRFAHTNVESLVNEYDDNG----EGIILFRPSHLTNKFEDKTVAY-TEQKMTSGKIKKFIQENIFGI 219 (481)
T ss_dssp HHHHHHHHHHTTTSCEEEECCHHHHHHHCSSS----EEEEEECCGGGCBTTBCSEEEC-CCSSCCHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHhccCceEEEECCHHHHHHhCCCC----CcEEEEecccccCccCCccccc-CCCCCCHHHHHHHHHHhCCCC
Confidence 9999999 788999999999999999999986 6699999 556677889 6 8899999999999999999
Q ss_pred eeecCCCchhhhccCCCcceEEEEEeC-c-c---hhhhHHHHHHHHHhccCc---eEEEEEecCCcccccchhhhhCCCC
Q 013976 153 VTIFTRENAPSVFESPIKNQLLLFAVS-N-D---SEKLLPVFEEAAKSFKGK---LIFVYVQMDNEDVGKPVSEYFGITG 224 (432)
Q Consensus 153 v~~l~~~~~~~~~~~~~~~~i~~~~~~-~-~---~~~~~~~~~~~a~~~~~~---i~f~~vd~~~~~~~~~l~~~~~i~~ 224 (432)
+.+++.+++..++.. +.+++|+... . . .+.+...+.++|++|+++ +.|+++|+.. ....++.||++.
T Consensus 220 v~e~t~~n~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~i~F~~~D~~~---~~~~l~~~gl~~ 294 (481)
T 3f8u_A 220 CPHMTEDNKDLIQGK--DLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKT---FSHELSDFGLES 294 (481)
T ss_dssp SCEECTTTHHHHTTS--SEEEEEECCCTTTCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTT---THHHHGGGTCCC
T ss_pred ccccChhHHHHhcCC--CceEEEEecccccchhhHHHHHHHHHHHHHHhcCCCceEEEEEEcHHH---HHHHHHHcCCCc
Confidence 999999999998753 4455554432 2 1 233678899999999998 9999999987 457789999983
Q ss_pred --CCCcEEEEEeCCCCceecCCCCCCHH--HHHHHHHHHhcCCcCccccCCCCCCCCCCceEEEecccchhhhhcCCCcE
Q 013976 225 --EAPKVLAYTGNDDAKKHILDGELTLD--KIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDV 300 (432)
Q Consensus 225 --~~~P~i~i~~~~~~~~y~~~~~~~~~--~i~~fi~~~~~g~l~~~~~se~~p~~~~~~v~~l~~~~~~~~~~~~~~~~ 300 (432)
...|++++++ .++.+|.|.+.++.+ +|.+|++++++|+++++++|+++|....+.+..+++.+|++.+.+.++++
T Consensus 295 ~~~~~P~~~i~~-~~~~ky~~~~~~t~e~~~l~~f~~~~~~g~~~~~~~s~~~p~~~~~~v~~~~~~~~~~~~~~~~k~v 373 (481)
T 3f8u_A 295 TAGEIPVVAIRT-AKGEKFVMQEEFSRDGKALERFLQDYFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNNENKDV 373 (481)
T ss_dssp CTTCSCEEEEEC-SSSCEEECCSCCCTTSHHHHHHHHHHHHTCCCCCCCCCCCCSCCCSSSEEECTTTHHHHHTCTTCEE
T ss_pred ccCCCcEEEEEc-CCCcccCCCcccCccHHHHHHHHHHHhcCCcccccccCCCCCCCCCCeEEecccCHHHHhhcCCCcE
Confidence 3689999987 446789999889999 99999999999999999999999998889999999999999987778999
Q ss_pred EEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc-ccCCCCCCceEEEEeCCCcccCceeccCCCCHHHH
Q 013976 301 LLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH-HRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVAL 379 (432)
Q Consensus 301 lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~-~~~~i~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l 379 (432)
+|.|||+||++|+.+.|.|.+++..+++..++.++.+|++.++. ..++|.++||+++|++|..+ ++..|.|.++.+.|
T Consensus 374 lv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~~~~~~~~v~~~Pt~~~~~~~~~~-~~~~~~G~~~~~~l 452 (481)
T 3f8u_A 374 LIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVPSPYEVRGFPTIYFSPANKKL-NPKKYEGGRELSDF 452 (481)
T ss_dssp EEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSSCCCTTCCCCSSSEEEEECTTCTT-SCEECCSCCSHHHH
T ss_pred EEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCchhhHhhCCCcccCEEEEEeCCCeE-eeeEeCCCCCHHHH
Confidence 99999999999999999999999999886689999999999977 58999999999999999876 57899999999999
Q ss_pred HHHHHhcCCCCCcc
Q 013976 380 YKFLKKNASIPFKI 393 (432)
Q Consensus 380 ~~fi~~~~~~~~~~ 393 (432)
.+||+++++.+...
T Consensus 453 ~~~l~~~~~~~~~~ 466 (481)
T 3f8u_A 453 ISYLQREATNPPVI 466 (481)
T ss_dssp HHHHHHHCSSCCCC
T ss_pred HHHHHHhcCCcccc
Confidence 99999999876654
No 2
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=100.00 E-value=4.6e-52 Score=396.68 Aligned_cols=340 Identities=35% Similarity=0.614 Sum_probs=307.9
Q ss_pred hCCCceeeCCHHHHHHHhhcCCeEEEEEecCCCcchHHHHHHHhccCCCceEEEeCcHHHHhHcCCCCCCCCCeEEEEec
Q 013976 44 IGPGIYNITTLDEAERVLTSETKVVLGYLNSLVGSESEVLADASRLEDDVNFYQTTNPDVAKIFHLDSKVNRPALVMVKK 123 (432)
Q Consensus 44 ~~~~~~~i~~~~~l~~~~~~~~~~vv~f~~~~~~~~~~~f~~~a~~~~~~~F~~~~~~~~~~~~~~~~~~~~p~i~l~~~ 123 (432)
..+.+..|++.+++++|++.++++|||||.+.+.+.++.|.++|+..+++.|+++++.++|++++++. |+|++||.
T Consensus 15 ~~~~~~~l~~~~~~~~~~~~~~~~vvgff~~~~~~~~~~f~~~A~~~~~~~F~~t~~~~v~~~~~v~~----~~i~lfk~ 90 (361)
T 3uem_A 15 GSEFATTLPDGAAAESLVESSEVAVIGFFKDVESDSAKQFLQAAEAIDDIPFGITSNSDVFSKYQLDK----DGVVLFKK 90 (361)
T ss_dssp CCSSSEECCSHHHHHHHHHTSSEEEEEECSCTTSHHHHHHHHHHHHCSSSCEEEECCHHHHHHTTCSS----SEEEEEES
T ss_pred ccccceecCCHHHHHHHHhcCCcEEEEEEcCCCchHHHHHHHHHhcCCCceEEEECcHHHHHHhCCCC----CeEEEEEe
Confidence 45778999999999999999999999999998899999999999555899999999999999999976 99999999
Q ss_pred CCCceecccCCCCCHHHHHHHHHhcCCCceeecCCCchhhhccCCCcc-eEEEEEeC-cchhhhHHHHHHHHHhccCceE
Q 013976 124 ETEKISYFADGKFDKSTIADFVFSNKLPLVTIFTRENAPSVFESPIKN-QLLLFAVS-NDSEKLLPVFEEAAKSFKGKLI 201 (432)
Q Consensus 124 ~~~~~~~y~~g~~~~~~l~~fi~~~~~p~v~~l~~~~~~~~~~~~~~~-~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~ 201 (432)
.++....| +|+++.++|.+||..++.|++.+++++++..++..+.+. +++||++| ++|+++.+.|+++|+++++++.
T Consensus 91 f~~~~~~~-~g~~~~~~i~~fi~~~~~p~v~~~~~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~ 169 (361)
T 3uem_A 91 FDEGRNNF-EGEVTKENLLDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKIL 169 (361)
T ss_dssp STTSEEEC-CSCCCHHHHHHHHHHHSSCSEEECSTTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCE
T ss_pred cCCCcccc-CCcCCHHHHHHHHHHcCCCcceecCcccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCceE
Confidence 88888999 999999999999999999999999999999998876554 56677788 8999999999999999999999
Q ss_pred EEEEecCCcccccchhhhhCCCCCCCcEEEEEeCC-CCceecCC-CCCCHHHHHHHHHHHhcCCcCccccCCCCCCC-CC
Q 013976 202 FVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGND-DAKKHILD-GELTLDKIKTFGEDFLEGKLKPFFKSDPIPET-ND 278 (432)
Q Consensus 202 f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~~~-~~~~y~~~-~~~~~~~i~~fi~~~~~g~l~~~~~se~~p~~-~~ 278 (432)
|+.+|++... ++.+++.||++....|+++++..+ ...+|.+. |.++.++|.+|++++++|++++..+|+++|+. ..
T Consensus 170 f~~vd~~~~~-~~~~~~~fgi~~~~~P~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~ 248 (361)
T 3uem_A 170 FIFIDSDHTD-NQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDK 248 (361)
T ss_dssp EEEECTTSGG-GHHHHHHTTCCTTTCSEEEEEECC--CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTT
T ss_pred EEEecCChHH-HHHHHHHcCCCccCCccEEEEEcCCcccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCccccc
Confidence 9999999433 678999999998556999999874 34677764 68999999999999999999999999999987 47
Q ss_pred CceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcccccCCCCCCceEEEE
Q 013976 279 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKSDGFPTILFF 358 (432)
Q Consensus 279 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~~~~~i~~~P~i~~~ 358 (432)
+.|..|++.+|++.+.+.+++++|.||||||++|+.+.|.|.+++..+++..++.++.+|++.+...+++|.++|++++|
T Consensus 249 ~~v~~l~~~~f~~~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~~~~~~v~~~Pt~~~~ 328 (361)
T 3uem_A 249 QPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVEAVKVHSFPTLKFF 328 (361)
T ss_dssp SSSEEECTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCBCSSCCCCSSSEEEEE
T ss_pred CCcEEeecCchhhhcccCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccchhhcCCcccCeEEEE
Confidence 78999999999999888889999999999999999999999999999988667999999999999999999999999999
Q ss_pred eCCCcccCceeccCCCCHHHHHHHHHhcCCCC
Q 013976 359 PAGNKSFDPINVDVDRTVVALYKFLKKNASIP 390 (432)
Q Consensus 359 ~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~ 390 (432)
++|... .+..|.|.++.+.|.+||+++.+..
T Consensus 329 ~~~~~~-~~~~~~G~~~~~~l~~~l~~~~~~~ 359 (361)
T 3uem_A 329 PASADR-TVIDYNGERTLDGFKKFLESGGQDG 359 (361)
T ss_dssp CSSSSC-CCEECCSCSSHHHHHHHHTTTSCSC
T ss_pred ECCCCc-ceeEecCCCCHHHHHHHHHhcCCCC
Confidence 887543 5779999999999999999987653
No 3
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=100.00 E-value=6.2e-51 Score=405.60 Aligned_cols=365 Identities=26% Similarity=0.412 Sum_probs=322.6
Q ss_pred CCCcceeeeccCcc--cccCCCcccCccCCCCCChhHHHHHHHHhhCCCceeeCCHHHHHHHhhcCC--eEEEEEecCCC
Q 013976 1 MSWRTSTTFRASRR--FTSSSTASIKLIMAAAPSKDAIVTWIKKKIGPGIYNITTLDEAERVLTSET--KVVLGYLNSLV 76 (432)
Q Consensus 1 ~~~Ptl~~f~~g~~--~~~~~~~~~~~~Y~G~~~~~~i~~~l~~~~~~~~~~i~~~~~l~~~~~~~~--~~vv~f~~~~~ 76 (432)
.||||+++|++|+. .. .|.|.++.+.|++||.+.+.|++..|++ ++.|++..+ +.+|+||.+.+
T Consensus 85 ~~~Pt~~~~~~g~~~~~~---------~~~G~~~~~~l~~~l~~~~~~~v~~i~~---~~~~~~~~~~~~~~v~~f~~~~ 152 (504)
T 2b5e_A 85 PGFPSLKIFKNSDVNNSI---------DYEGPRTAEAIVQFMIKQSQPAVAVVAD---LPAYLANETFVTPVIVQSGKID 152 (504)
T ss_dssp CSSSEEEEEETTCTTCEE---------ECCSCCSHHHHHHHHHHHTSCSEEECSC---HHHHHHHSCCSSCEEEEEESCC
T ss_pred CcCCEEEEEeCCccccce---------eecCCCCHHHHHHHHHHhcCCcceeHHH---HHHHHhcCCCceEEEEEeCCCC
Confidence 48999999999984 22 4999999999999999999999999987 888888888 89999999877
Q ss_pred cchHHHHHHHh-ccCCCceEEEeCcHHHHhHcCCCCCCCCCeEEEEecCCCceecccCCC-C---CHHHHHHHHHhcCCC
Q 013976 77 GSESEVLADAS-RLEDDVNFYQTTNPDVAKIFHLDSKVNRPALVMVKKETEKISYFADGK-F---DKSTIADFVFSNKLP 151 (432)
Q Consensus 77 ~~~~~~f~~~a-~~~~~~~F~~~~~~~~~~~~~~~~~~~~p~i~l~~~~~~~~~~y~~g~-~---~~~~l~~fi~~~~~p 151 (432)
......|..+| .+++++.|+++. ++++++++. +++|+..+ ....| .|. + +.+.|..||..++.|
T Consensus 153 ~~~~~~f~~~A~~~~~~~~F~~~~--~~~~~~~~~-------i~l~~~~~-~~~~~-~g~~~~~~~~~~l~~fi~~~~~p 221 (504)
T 2b5e_A 153 ADFNATFYSMANKHFNDYDFVSAE--NADDDFKLS-------IYLPSAMD-EPVVY-NGKKADIADADVFEKWLQVEALP 221 (504)
T ss_dssp HHHHHHHHHHHHHTTTTCEEEEEE--CTTSCCEEE-------EEETTEEE-EEEEC-CSCHHHHTSHHHHHHHHHHHSSC
T ss_pred chHHHHHHHHHHHhhcCcEEEEEH--HHHHhcCCe-------EEecCCCC-ccccc-CCcccccCCHHHHHHHHHhcccC
Confidence 88899999999 788999999887 677666642 88888866 77788 888 7 999999999999999
Q ss_pred ceeecCCCchhhhccCCCcceEEEEEeCcchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEE
Q 013976 152 LVTIFTRENAPSVFESPIKNQLLLFAVSNDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLA 231 (432)
Q Consensus 152 ~v~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~ 231 (432)
++.+++.+++..++..+.+.+++++......+.+...++++|+++++++.|+++|+.. ++.+++.||+ ....|+++
T Consensus 222 ~v~~~t~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~a~~~~~~i~F~~id~~~---~~~~~~~~gl-~~~~P~v~ 297 (504)
T 2b5e_A 222 YFGEIDGSVFAQYVESGLPLGYLFYNDEEELEEYKPLFTELAKKNRGLMNFVSIDARK---FGRHAGNLNM-KEQFPLFA 297 (504)
T ss_dssp SSCBCCHHHHHHHHHTTSCEEEEEESSHHHHHHHHHHHHHHHHHTTTTCEEEEEEHHH---HTTHHHHTTC-CSCSSEEE
T ss_pred CcccCCHhHHHHHhcCCCcEEEEEecCcccHHHHHHHHHHHHHhcCCeeEEEEEehhh---hHHHHHHcCC-cccCCEEE
Confidence 9999999999999988876666665443444788999999999999999999999987 5589999999 76789999
Q ss_pred EEeCCCCceecCC--CC-----------CCHHHHHHHHHHHhcCCcCccccCCCCCCCCCCceEEEecccchhhhhcCCC
Q 013976 232 YTGNDDAKKHILD--GE-----------LTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESK 298 (432)
Q Consensus 232 i~~~~~~~~y~~~--~~-----------~~~~~i~~fi~~~~~g~l~~~~~se~~p~~~~~~v~~l~~~~~~~~~~~~~~ 298 (432)
+++...+.+|.+. ++ ++.+.|.+|+.+++.|++.|..+|+++|....+.|..|++.+|++.+.+.++
T Consensus 298 i~~~~~~~ky~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~~~~g~~~p~~~s~~~p~~~~~~v~~l~~~~f~~~v~~~~k 377 (504)
T 2b5e_A 298 IHDMTEDLKYGLPQLSEEAFDELSDKIVLESKAIESLVKDFLKGDASPIVKSQEIFENQDSSVFQLVGKNHDEIVNDPKK 377 (504)
T ss_dssp EEETTTTEEEECCCCCHHHHHTCCSCCCCCHHHHHHHHHHHHHTCCCCCCCCCCCCCCCSCSEEEECTTTHHHHHHCTTC
T ss_pred EEeCCcCcccCCCCCccchhhccccccccCHHHHHHHHHHHHcCCCChhhhcCCCCccccccceecccccHHHhhccCCC
Confidence 9988667788876 66 8999999999999999999999999999888889999999999999888889
Q ss_pred cEEEEEeCCCChhhhhhHHHHHHHHHHhc-CCCCEEEEEEeCCCcccccCCCCCCceEEEEeCCCcccCceeccCCCCHH
Q 013976 299 DVLLEIYAPWCGHCQAFEPTYNKLAKHLR-GVDSIVIAKMDGTTNEHHRAKSDGFPTILFFPAGNKSFDPINVDVDRTVV 377 (432)
Q Consensus 299 ~~lv~f~~~~c~~c~~~~~~~~~la~~~~-~~~~~~~~~id~~~~~~~~~~i~~~P~i~~~~~g~~~~~~~~y~g~~~~~ 377 (432)
++||.|||+||++|+.+.|.|.+++..+. ...++.++.+|++.++...++|.++||+++|++|+.. .+..|.|.++.+
T Consensus 378 ~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~~~v~~~Pt~~~~~~G~~~-~~~~~~G~~~~~ 456 (504)
T 2b5e_A 378 DVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVRGVVIEGYPTIVLYPGGKKS-ESVVYQGSRSLD 456 (504)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCCCSSCCCSSSSEEEEECCTTSC-CCCBCCSCCCHH
T ss_pred CEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCccccccCCceecCeEEEEeCCcee-cceEecCCCCHH
Confidence 99999999999999999999999999987 4347999999999988866999999999999998764 466899999999
Q ss_pred HHHHHHHhcCCCCCcc
Q 013976 378 ALYKFLKKNASIPFKI 393 (432)
Q Consensus 378 ~l~~fi~~~~~~~~~~ 393 (432)
.|.+||++++......
T Consensus 457 ~l~~~i~~~~~~~~~~ 472 (504)
T 2b5e_A 457 SLFDFIKENGHFDVDG 472 (504)
T ss_dssp HHHHHHHHHCTTCCCH
T ss_pred HHHHHHHhcCCCCCCH
Confidence 9999999998877644
No 4
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=4.3e-40 Score=344.23 Aligned_cols=346 Identities=17% Similarity=0.253 Sum_probs=292.0
Q ss_pred CCCcceeeeccCcccccCCCcccCccCCCCCChhHHHHHHHHhhCCCceeeCCH---HHHHHHhhcCCeEEEEEecCCCc
Q 013976 1 MSWRTSTTFRASRRFTSSSTASIKLIMAAAPSKDAIVTWIKKKIGPGIYNITTL---DEAERVLTSETKVVLGYLNSLVG 77 (432)
Q Consensus 1 ~~~Ptl~~f~~g~~~~~~~~~~~~~~Y~G~~~~~~i~~~l~~~~~~~~~~i~~~---~~l~~~~~~~~~~vv~f~~~~~~ 77 (432)
.+|||+++|++|+... .|.|.++++.|++||.+++.+++..|++. +++++++..+.+.||+|++....
T Consensus 186 ~~~Pt~~~~~~g~~~~---------~~~G~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~vi~f~~~~~~ 256 (780)
T 3apo_A 186 NSYPSLFIFRSGMAAV---------KYNGDRSKESLVAFAMQHVRSTVTELSTGNFVNAIETAFAAGVGWLITFCSKGED 256 (780)
T ss_dssp ---CEEEEECTTSCCE---------ECCSCSCHHHHHHHHHTTSCCCEEECCHHHHHHHHHHHHHHTCEEEEEEECTTSC
T ss_pred ceeeeEEEEeCCcEee---------EecCCCCHHHHHHHHHHhchhhheeccchhhHHHHHhhhccCCCEEEEEecCccc
Confidence 4799999999998643 49999999999999999999999999887 78888888888889999876431
Q ss_pred -chHHHHHH-----------------------------------------------------------------------
Q 013976 78 -SESEVLAD----------------------------------------------------------------------- 85 (432)
Q Consensus 78 -~~~~~f~~----------------------------------------------------------------------- 85 (432)
+....+.+
T Consensus 257 ~~~~~~~~~l~~~f~~~~~f~~v~c~~~~~l~~~~gi~~~p~~~f~~~~~~~~~~~~~~~y~g~~~~~~i~~~i~~~~p~ 336 (780)
T 3apo_A 257 CLTSQTRLRLSGMLDGLVNVGWVDCDAQDSLCKSLDTTASTTAYFPPGATLNDREKSSVLFLNSLDAKEIYMEIIHNLPD 336 (780)
T ss_dssp CCCHHHHHHHHHHTTTTEEEEEEETTTSHHHHTCC-----CEEEECTTCCSSTTTGGGSEEECCCCHHHHHHHHHHHSCC
T ss_pred ccCHHHHHHHHHHhhccceEEEEEcCCCHHHHHHhCCCCCceeeeccccccCCCcccceeccccccHHHHHHHHHHhCCC
Confidence 11111111
Q ss_pred -------------------------------------Hh-ccC-CCceEEEe---CcHHHHhHcCCCCCCCCCeEEEEec
Q 013976 86 -------------------------------------AS-RLE-DDVNFYQT---TNPDVAKIFHLDSKVNRPALVMVKK 123 (432)
Q Consensus 86 -------------------------------------~a-~~~-~~~~F~~~---~~~~~~~~~~~~~~~~~p~i~l~~~ 123 (432)
+| .++ ..+.|+.+ .++.+|+++++.. |++++|+.
T Consensus 337 v~~it~~~f~~~~~~~~~lv~F~~~~~~~~~~~~~~~~A~~~~~~~i~f~~~D~~~~~~~~~~~~~~~----p~i~l~~~ 412 (780)
T 3apo_A 337 FELLSANQLEDRLAHHRWLVFFHFGKNENANDPELKKLKTLLKNEHIQVVRFDCSSAPGICSDLYVFQ----PSLAVFKG 412 (780)
T ss_dssp CCEECHHHHHHHHTTSEEEEEEECC-----CCGGGGGHHHHHGGGTEEEEEEEGGGCHHHHHHTTCCS----CEEEEEES
T ss_pred cccCCHHHHHHHhccCCeEEEEecCCccccchHHHHHHHHhhccCceeEEEEeCCCchhhHhhccccC----ChhhhccC
Confidence 22 111 34667765 4567899999875 99999998
Q ss_pred CC-CceecccCCCCCHHHHHHHHHhcCCCceeecCCCchhhhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceE
Q 013976 124 ET-EKISYFADGKFDKSTIADFVFSNKLPLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLI 201 (432)
Q Consensus 124 ~~-~~~~~y~~g~~~~~~l~~fi~~~~~p~v~~l~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~ 201 (432)
.+ +....| .|.++.++|..|+..+..|.+.+++.+++..+ .+.++++.||++| ++|+.+.+.|.++|+++++++.
T Consensus 413 ~~~e~~~~~-~g~~~~~~i~~f~~~~~~~~v~~l~~~~~~~~--~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~v~ 489 (780)
T 3apo_A 413 QGTKEYEIH-HGKKILYDILAFAKESVNSHVTTLGPQNFPAS--DKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLK 489 (780)
T ss_dssp STTSSEEEC-CSCCCHHHHHHHHHHHHTSCEEECCTTTSCTT--CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCE
T ss_pred CCcceeeec-ccHhhHHHHHHHhhhccCCCCEecCHHHHHHc--CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeE
Confidence 77 557788 89999999999999999999999999999887 6668899999999 9999999999999999999999
Q ss_pred EEEEecCCcccccchhhhhCCCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcCCcCccccCCCCCCCCCCce
Q 013976 202 FVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDV 281 (432)
Q Consensus 202 f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g~l~~~~~se~~p~~~~~~v 281 (432)
|+.+|+++ .+.+++.|||++. |+++++..+ ..+.+.|.++.++|.+|++++++ +.|
T Consensus 490 ~~~vd~~~---~~~~~~~~~v~~~--Pt~~~~~~g--~~~~~~g~~~~~~l~~fi~~~~~-----------------~~v 545 (780)
T 3apo_A 490 VGTLDCTI---HEGLCNMYNIQAY--PTTVVFNQS--SIHEYEGHHSAEQILEFIEDLRN-----------------PSV 545 (780)
T ss_dssp EEEEETTT---CHHHHHHTTCCSS--SEEEEEETT--EEEEECSCSCHHHHHHHHHHHHS-----------------CSE
T ss_pred EEEEeCCC---CHHHHHHcCCCcC--CeEEEEcCC--ceeeecCcccHHHHHHHHHhhcc-----------------cce
Confidence 99999997 5689999999997 999998653 45788999999999999999986 248
Q ss_pred EEEecccchhhhhcC--CCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEEE
Q 013976 282 KIVVGNNFDEIVLDE--SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILF 357 (432)
Q Consensus 282 ~~l~~~~~~~~~~~~--~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~~ 357 (432)
..|++++|++++.+. +..++|.||+|||++|+.+.|.|.++|+.+++ ++.|+.+||+.+.. ..++|.++|++++
T Consensus 546 ~~l~~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pti~~ 623 (780)
T 3apo_A 546 VSLTPSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTG--LINVGSVDCGQYHSFCTQENVQRYPEIRF 623 (780)
T ss_dssp EECCHHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TSEEEEEETTTTHHHHHHTTCCSSSEEEE
T ss_pred eecCcccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC--CeEEEEEECcchHHHHHHcCCCCCCeEEE
Confidence 889999999988654 46789999999999999999999999999987 69999999998876 6799999999999
Q ss_pred EeCCCcc-cCceeccC-CCCHHHHHHHHHhcCC
Q 013976 358 FPAGNKS-FDPINVDV-DRTVVALYKFLKKNAS 388 (432)
Q Consensus 358 ~~~g~~~-~~~~~y~g-~~~~~~l~~fi~~~~~ 388 (432)
|+.|... .+++.|.| .++.+.|.+||.++..
T Consensus 624 ~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~ 656 (780)
T 3apo_A 624 YPQKSSKAYQYHSYNGWNRDAYSLRSWGLGFLP 656 (780)
T ss_dssp ECCCSSSCCSCEECCCSCCSHHHHHHHHHTTSC
T ss_pred EcCCCcCccchhhcCCCCCCHHHHHHHHhhhcc
Confidence 9987652 14678999 8999999999999873
No 5
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=4.9e-36 Score=313.51 Aligned_cols=342 Identities=14% Similarity=0.254 Sum_probs=289.9
Q ss_pred CcceeeeccCc-ccccCCCcccCccCCCCCChhHHHHHHHHhhCCCceeeCCHHHHHHHhhcCCeEEEEEecCCCcc---
Q 013976 3 WRTSTTFRASR-RFTSSSTASIKLIMAAAPSKDAIVTWIKKKIGPGIYNITTLDEAERVLTSETKVVLGYLNSLVGS--- 78 (432)
Q Consensus 3 ~Ptl~~f~~g~-~~~~~~~~~~~~~Y~G~~~~~~i~~~l~~~~~~~~~~i~~~~~l~~~~~~~~~~vv~f~~~~~~~--- 78 (432)
.|++.+|+.+. .-. ..|.|..+.+.|.+|+.....+.+..++ .+.+.++ ..+.++|.|+.+.|.+
T Consensus 404 ~p~i~l~~~~~~e~~--------~~~~g~~~~~~i~~f~~~~~~~~v~~l~-~~~~~~~--~~~~vlv~F~a~wC~~c~~ 472 (780)
T 3apo_A 404 QPSLAVFKGQGTKEY--------EIHHGKKILYDILAFAKESVNSHVTTLG-PQNFPAS--DKEPWLVDFFAPWSPPSRA 472 (780)
T ss_dssp SCEEEEEESSTTSSE--------EECCSCCCHHHHHHHHHHHHTSCEEECC-TTTSCTT--CCSCEEEEEECTTCHHHHH
T ss_pred CChhhhccCCCccee--------eecccHhhHHHHHHHhhhccCCCCEecC-HHHHHHc--CCCeEEEEEECCCCHHHHH
Confidence 38999998754 101 1388999999999999999999998886 4566665 5678889999888864
Q ss_pred hHHHHHHHh-ccCCCceEEEeC---cHHHHhHcCCCCCCCCCeEEEEecCCCceecccCCCCCHHHHHHHHHhcCCCcee
Q 013976 79 ESEVLADAS-RLEDDVNFYQTT---NPDVAKIFHLDSKVNRPALVMVKKETEKISYFADGKFDKSTIADFVFSNKLPLVT 154 (432)
Q Consensus 79 ~~~~f~~~a-~~~~~~~F~~~~---~~~~~~~~~~~~~~~~p~i~l~~~~~~~~~~y~~g~~~~~~l~~fi~~~~~p~v~ 154 (432)
+...|.++| .+++.+.|+.+. ++.+++.||+.. .|++++++. +....| .|..+.++|..||.....|.|.
T Consensus 473 ~~p~~~~~a~~~~~~v~~~~vd~~~~~~~~~~~~v~~---~Pt~~~~~~--g~~~~~-~g~~~~~~l~~fi~~~~~~~v~ 546 (780)
T 3apo_A 473 LLPELRKASTLLYGQLKVGTLDCTIHEGLCNMYNIQA---YPTTVVFNQ--SSIHEY-EGHHSAEQILEFIEDLRNPSVV 546 (780)
T ss_dssp HHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCS---SSEEEEEET--TEEEEE-CSCSCHHHHHHHHHHHHSCSEE
T ss_pred HhHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCc---CCeEEEEcC--Cceeee-cCcccHHHHHHHHHhhccccee
Confidence 556788888 566789998853 567999999986 799999975 334678 8999999999999999999999
Q ss_pred ecCCCchhhhccC---CCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEE
Q 013976 155 IFTRENAPSVFES---PIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVL 230 (432)
Q Consensus 155 ~l~~~~~~~~~~~---~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i 230 (432)
.++.+++..+... +..+++.||++| ++|+++.+.|+++|+.+++++.|+.+||+. +..+|+.++++++ |++
T Consensus 547 ~l~~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~v~~~~vd~~~---~~~l~~~~~v~~~--Pti 621 (780)
T 3apo_A 547 SLTPSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGLINVGSVDCGQ---YHSFCTQENVQRY--PEI 621 (780)
T ss_dssp ECCHHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTT---THHHHHHTTCCSS--SEE
T ss_pred ecCcccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCCeEEEEEECcc---hHHHHHHcCCCCC--CeE
Confidence 9999999987654 345688899999 999999999999999999999999999998 5688999999997 999
Q ss_pred EEEeCCCC---ceecCCC-CCCHHHHHHHHHHHhcCCcCccccCCCCCCCCCCceEEEecccchhhhhcCCCcEEEEEeC
Q 013976 231 AYTGNDDA---KKHILDG-ELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYA 306 (432)
Q Consensus 231 ~i~~~~~~---~~y~~~~-~~~~~~i~~fi~~~~~g~l~~~~~se~~p~~~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~ 306 (432)
+++..+.. ....|.| .++.++|.+|+.+.+. +.+..++..+|.+.+.+.+++++|.||+
T Consensus 622 ~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~-----------------~~v~~l~~~~~~~~~~~~~~~v~v~F~a 684 (780)
T 3apo_A 622 RFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGFLP-----------------QASIDLTPQTFNEKVLQGKTHWVVDFYA 684 (780)
T ss_dssp EEECCCSSSCCSCEECCCSCCSHHHHHHHHHTTSC-----------------CCSEEECHHHHHHHTTTCSSCEEEEEEC
T ss_pred EEEcCCCcCccchhhcCCCCCCHHHHHHHHhhhcc-----------------cccccCCHHHHHHHHhcCCCeEEEEEEC
Confidence 99976543 2455788 8999999999999753 2367899999998777778999999999
Q ss_pred CCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEEEEeCCCcccCceeccC----CCCHHHHH
Q 013976 307 PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFFPAGNKSFDPINVDV----DRTVVALY 380 (432)
Q Consensus 307 ~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~~~~~g~~~~~~~~y~g----~~~~~~l~ 380 (432)
+||++|+.+.|.|.+++..+++ ++.|+.+|++.+.. .+++|.++|++++|++|..+. .+.| .++.+.|.
T Consensus 685 ~wC~~C~~~~p~~~~la~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~---~~~G~~~g~~~~~~l~ 759 (780)
T 3apo_A 685 PWSGPSQNFAPEFELLARMIKG--KVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYERAKK---SIWEEQINSRDAKTIA 759 (780)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTT--TCEEEEEETTTCHHHHHHTTCCSSSEEEEEEEETTTT---EEEEEEECCCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhcC--CceEEEEECCCCHHHHHhcCCCcCCEEEEEcCCCccc---cccCcccCCcCHHHHH
Confidence 9999999999999999999987 69999999998876 689999999999999988764 4555 58999999
Q ss_pred HHHHhcCC
Q 013976 381 KFLKKNAS 388 (432)
Q Consensus 381 ~fi~~~~~ 388 (432)
+||++++.
T Consensus 760 ~~l~~~l~ 767 (780)
T 3apo_A 760 ALIYGKLE 767 (780)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHH
Confidence 99999974
No 6
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=100.00 E-value=2.8e-33 Score=266.22 Aligned_cols=248 Identities=16% Similarity=0.222 Sum_probs=215.3
Q ss_pred CCCcceeeeccCcccccCCCcccCccCCCCCChhHHHHHHHHhhCCCceeeCCHHHHHHHhh-cCCeEEEEEecCCCcch
Q 013976 1 MSWRTSTTFRASRRFTSSSTASIKLIMAAAPSKDAIVTWIKKKIGPGIYNITTLDEAERVLT-SETKVVLGYLNSLVGSE 79 (432)
Q Consensus 1 ~~~Ptl~~f~~g~~~~~~~~~~~~~~Y~G~~~~~~i~~~l~~~~~~~~~~i~~~~~l~~~~~-~~~~~vv~f~~~~~~~~ 79 (432)
.|||||++|++|+... |.|.|+++.|++||+++++|++..|++.++++++++ .+++++|+||.+.+.+.
T Consensus 90 ~~~PTl~~f~~G~~~~----------y~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~~~~~ 159 (367)
T 3us3_A 90 TEEDSIYVFKEDEVIE----------YDGEFSADTLVEFLLDVLEDPVELIEGERELQAFENIEDEIKLIGYFKNKDSEH 159 (367)
T ss_dssp CSTTEEEEEETTEEEE----------CCSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHHCCSSCEEEEECSCTTCHH
T ss_pred CcCceEEEEECCcEEE----------eCCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhccCCCcEEEEEECCCCchH
Confidence 4899999999998766 999999999999999999999999999999999998 68999999999988899
Q ss_pred HHHHHHHh-ccCCCceEEEeCcHHHHhHcCCCCCCCCCeEEEEecCCCceecccCCC-CCHHHHHHHHHhcCCCceeecC
Q 013976 80 SEVLADAS-RLEDDVNFYQTTNPDVAKIFHLDSKVNRPALVMVKKETEKISYFADGK-FDKSTIADFVFSNKLPLVTIFT 157 (432)
Q Consensus 80 ~~~f~~~a-~~~~~~~F~~~~~~~~~~~~~~~~~~~~p~i~l~~~~~~~~~~y~~g~-~~~~~l~~fi~~~~~p~v~~l~ 157 (432)
+..|.++| .+++++.|+++++.++++++++.. |+|++|+..++....| .|. ++.++|.+||..++.|+|.+++
T Consensus 160 ~~~f~~~A~~~~~~~~F~~~~~~~~~~~~~v~~----p~i~lf~~~~~~~~~y-~g~~~~~~~l~~fi~~~~~p~v~elt 234 (367)
T 3us3_A 160 YKAFKEAAEEFHPYIPFFATFDSKVAKKLTLKL----NEIDFYEAFMEEPVTI-PDKPNSEEEIVNFVEEHRRSTLRKLK 234 (367)
T ss_dssp HHHHHHHHHHHTTTSCEEEECCHHHHHHHTCCT----TCEEEECTTCSSCEEC-SSSSCCHHHHHHHHHHTCSCSEEECC
T ss_pred HHHHHHHHHhhcCCcEEEEECCHHHHHHcCCCC----CeEEEEcCCCCCCeec-CCCCCCHHHHHHHHHHcCccceeecC
Confidence 99999999 788999999999999999999985 9999999877788899 774 8999999999999999999999
Q ss_pred CCchhhhccCCC-cceEEEEEe-C-cchhhhHHHHHHHHHhccC--ceEEEEEecCCcccccchh----hhhCCCCCCCc
Q 013976 158 RENAPSVFESPI-KNQLLLFAV-S-NDSEKLLPVFEEAAKSFKG--KLIFVYVQMDNEDVGKPVS----EYFGITGEAPK 228 (432)
Q Consensus 158 ~~~~~~~~~~~~-~~~i~~~~~-~-~~~~~~~~~~~~~a~~~~~--~i~f~~vd~~~~~~~~~l~----~~~~i~~~~~P 228 (432)
.+++..++.... ..++++|.+ + ..+.++...++++|++|++ ++.|+++|+... ...+ +.||+.. ..|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~---~~~l~~~~~~fgl~~-~~P 310 (367)
T 3us3_A 235 PESMYETWEDDMDGIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDF---PLLVPYWEKTFDIDL-SAP 310 (367)
T ss_dssp GGGHHHHHHSCBTTEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGC---TTTHHHHHHHHTCCT-TSC
T ss_pred hhhHHHHHhhccCCcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccc---hhHHHHHHHhcCCCC-CCC
Confidence 999988776432 234444444 4 5688999999999999998 799999999984 3444 4599983 579
Q ss_pred EEEEEeCCCC--ceecCCC---CCCHHHHHHHHHHHhcCCcCcc
Q 013976 229 VLAYTGNDDA--KKHILDG---ELTLDKIKTFGEDFLEGKLKPF 267 (432)
Q Consensus 229 ~i~i~~~~~~--~~y~~~~---~~~~~~i~~fi~~~~~g~l~~~ 267 (432)
++++++...+ .+|.+.+ .++.++|.+|++++++|+++|.
T Consensus 311 ~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~~~Gkl~p~ 354 (367)
T 3us3_A 311 QIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDVLEGEINTE 354 (367)
T ss_dssp EEEEEETTTCCEEECCCCTTSCCCCHHHHHHHHHHHHHTSSCC-
T ss_pred eEEEEecccccceeecCCcccccCCHHHHHHHHHHHHcCCcCcc
Confidence 9999987665 4676764 6999999999999999999985
No 7
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=100.00 E-value=1e-31 Score=241.72 Aligned_cols=229 Identities=24% Similarity=0.371 Sum_probs=185.2
Q ss_pred hhCCCceeeCCHHHHHHHhhc-CCeEEEEEecCCCcchHHHHHHHh-ccCCCceEEEeCcHHHHhHcCCCCCCCCCeEEE
Q 013976 43 KIGPGIYNITTLDEAERVLTS-ETKVVLGYLNSLVGSESEVLADAS-RLEDDVNFYQTTNPDVAKIFHLDSKVNRPALVM 120 (432)
Q Consensus 43 ~~~~~~~~i~~~~~l~~~~~~-~~~~vv~f~~~~~~~~~~~f~~~a-~~~~~~~F~~~~~~~~~~~~~~~~~~~~p~i~l 120 (432)
+++|+++.|++.+++++|++. +++++||||.+.+++.++.|.++| .+++++.|+++++++++++++++. |+|++
T Consensus 3 ~~gP~v~~l~s~~~~~~~~~~~~~v~vVgff~~~~~~~~~~F~~~A~~lr~~~~F~~t~~~~v~~~~~v~~----p~ivl 78 (250)
T 3ec3_A 3 LGSPPSKEILTLKQVQEFLKDGDDVVILGVFQGVGDPGYLQYQDAANTLREDYKFHHTFSTEIAKFLKVSL----GKLVL 78 (250)
T ss_dssp --CCSSEECCCHHHHHHHHHHCSSCEEEEECSCTTCHHHHHHHHHHHHHTTTCCEEEECCHHHHHHHTCCS----SEEEE
T ss_pred CCCCCceecCCHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHHHHHHhhhcCcEEEEECcHHHHHHcCCCC----CeEEE
Confidence 578999999999999999998 999999999999999999999999 788999999999999999999976 99999
Q ss_pred Eec------CCCceecccC--CCCCHHHHHHHHHhcCCCceeecCCCchhhhccCCCcceEEEEEeC------cchhhhH
Q 013976 121 VKK------ETEKISYFAD--GKFDKSTIADFVFSNKLPLVTIFTRENAPSVFESPIKNQLLLFAVS------NDSEKLL 186 (432)
Q Consensus 121 ~~~------~~~~~~~y~~--g~~~~~~l~~fi~~~~~p~v~~l~~~~~~~~~~~~~~~~i~~~~~~------~~~~~~~ 186 (432)
||+ .++....| . |.++.++|.+||..+++|+|.+++.+++..++. +.+..++|+... ..++.++
T Consensus 79 fk~~~~~~kfde~~~~y-~g~~~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~~-~~~l~~~~~~~d~~~~~~~~~~~~~ 156 (250)
T 3ec3_A 79 MQPEKFQSKYEPRMHVM-DVQGSTEASAIKDYVVKHALPLVGHRKTSNDAKRYS-KRPLVVVYYSVDFSFDYRTATQFWR 156 (250)
T ss_dssp ECCGGGCCTTSCSCEEE-ECCTTSCHHHHHHHHHHHSSCTEEEECTTTHHHHSC-SSSEEEEEECCCCSTTTHHHHHHHH
T ss_pred Eecchhhccccccceec-cCCCCCCHHHHHHHHHHcCCCceeecCccchhhhhc-cCccEEEEEecccccccchhHHHHH
Confidence 996 35677888 6 589999999999999999999999999998874 556666655432 2346688
Q ss_pred HHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCC-CcEEEEEeCCCCceecCC-CCCCHHHHHHHHHHHhcCCc
Q 013976 187 PVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEA-PKVLAYTGNDDAKKHILD-GELTLDKIKTFGEDFLEGKL 264 (432)
Q Consensus 187 ~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~-~P~i~i~~~~~~~~y~~~-~~~~~~~i~~fi~~~~~g~l 264 (432)
..++++|++|+ ++.|+++|+.+ +.+.++.||+.... +|.+++++ ..+.+|.+. +.++.++|.+|++++++|++
T Consensus 157 ~~~~~vAk~~k-ki~F~~~d~~~---~~~~l~~fgl~~~~~~p~~~~~~-~~~~ky~~~~~~~t~~~i~~Fv~~~~~Gkl 231 (250)
T 3ec3_A 157 NKVLEVAKDFP-EYTFAIADEED---YATEVKDLGLSESGGDVNAAILD-ESGKKFAMEPEEFDSDALREFVMAFKKGKL 231 (250)
T ss_dssp HHHHHHHTTCT-TSEEEEEETTT---THHHHHHTTCSSCSCSCEEEEEC-TTSCEEECCCCSCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhhc-ceeEEEEcHHH---HHHHHHHcCCCccCCCcEEEEEc-CCCceecCCcccCCHHHHHHHHHHHHCCCc
Confidence 99999999999 99999999987 44678999998653 35776665 456789887 68999999999999999999
Q ss_pred CccccCCCCCCCCCCceE
Q 013976 265 KPFFKSDPIPETNDGDVK 282 (432)
Q Consensus 265 ~~~~~se~~p~~~~~~v~ 282 (432)
+|+++|||+|+.++++|.
T Consensus 232 ~p~~kSepiPe~~~~pV~ 249 (250)
T 3ec3_A 232 KPVIKSQPVPKNNKGAAA 249 (250)
T ss_dssp CCCC--------------
T ss_pred cceeecCCCCCCCCCCCC
Confidence 999999999998776653
No 8
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=100.00 E-value=1.5e-31 Score=253.39 Aligned_cols=246 Identities=16% Similarity=0.239 Sum_probs=213.4
Q ss_pred CCCcceeeeccCcccccCCCcccCccCCCCCChhHHHHHHHHhhCCCceeeCCHHHHHHHhh-cCCeEEEEEecCCCcch
Q 013976 1 MSWRTSTTFRASRRFTSSSTASIKLIMAAAPSKDAIVTWIKKKIGPGIYNITTLDEAERVLT-SETKVVLGYLNSLVGSE 79 (432)
Q Consensus 1 ~~~Ptl~~f~~g~~~~~~~~~~~~~~Y~G~~~~~~i~~~l~~~~~~~~~~i~~~~~l~~~~~-~~~~~vv~f~~~~~~~~ 79 (432)
.||||+++|++|+... |.|.|+++.|++||.++++|++..|++.+++++++. ++++++|+||.+.+.+.
T Consensus 88 ~~~Pt~~~~~~g~~~~----------~~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~~~~~ 157 (350)
T 1sji_A 88 DEEGSLYVLKGDRTIE----------FDGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERIEDQIKLIGFFKSEESEY 157 (350)
T ss_dssp CSTTEEEEEETTEEEE----------ECSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHCCSSCEEEEECSCTTSHH
T ss_pred CccceEEEEECCcEEE----------ecCCCCHHHHHHHHHHhcCCcceeccchHHHHHHhccCCCcEEEEEECCCCcHH
Confidence 4899999999998554 999999999999999999999999999999999998 78899999999988889
Q ss_pred HHHHHHHh-ccCCCceEEEeCcHHHHhHcCCCCCCCCCeEEEEecCCCceecccCCC-CCHHHHHHHHHhcCCCceeecC
Q 013976 80 SEVLADAS-RLEDDVNFYQTTNPDVAKIFHLDSKVNRPALVMVKKETEKISYFADGK-FDKSTIADFVFSNKLPLVTIFT 157 (432)
Q Consensus 80 ~~~f~~~a-~~~~~~~F~~~~~~~~~~~~~~~~~~~~p~i~l~~~~~~~~~~y~~g~-~~~~~l~~fi~~~~~p~v~~l~ 157 (432)
+..|.++| .+++++.|+.+.++++++++++.. |+|++|++.++....| .|. ++.++|.+||..++.|++.+++
T Consensus 158 ~~~~~~~A~~~~~~~~f~~~~~~~~~~~~~v~~----p~i~~~~~~~~~~~~y-~g~~~~~~~l~~fi~~~~~p~v~elt 232 (350)
T 1sji_A 158 YKAFEEAAEHFQPYIKFFATFDKGVAKKLSLKM----NEVDFYEPFMDEPIAI-PDKPYTEEELVEFVKEHQRPTLRRLR 232 (350)
T ss_dssp HHHHHHHHHHTTTTSEEEEECCHHHHHHHTCCT----TCEEEECTTCSSCEEC-SSSSCCHHHHHHHHHHHCCCSEEECC
T ss_pred HHHHHHHHHhhccCcEEEEECCHHHHHHcCCCC----CcEEEEeCCCCCceec-CCCCCCHHHHHHHHHHcCccchhhcC
Confidence 99999999 677999999999999999999973 9999999877778889 887 8999999999999999999999
Q ss_pred CCchhhhccCCC-cceEEEEEe-C-cchhhhHHHHHHHHHhccC--ceEEEEEecCCcccccchh----hhhCCCCCCCc
Q 013976 158 RENAPSVFESPI-KNQLLLFAV-S-NDSEKLLPVFEEAAKSFKG--KLIFVYVQMDNEDVGKPVS----EYFGITGEAPK 228 (432)
Q Consensus 158 ~~~~~~~~~~~~-~~~i~~~~~-~-~~~~~~~~~~~~~a~~~~~--~i~f~~vd~~~~~~~~~l~----~~~~i~~~~~P 228 (432)
.+++..++..+. +..+++|.. + .+|..+.+.++++|+++++ ++.|+++|+.. ++.++ +.||++. ..|
T Consensus 233 ~~~~~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~~---~~~~~~~~~~~~gi~~-~~P 308 (350)
T 1sji_A 233 PEDMFETWEDDLNGIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDD---FPLLVAYWEKTFKIDL-FKP 308 (350)
T ss_dssp TTTHHHHHHSCSSSEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGGG---CHHHHHHHHHHCCSCT-TSC
T ss_pred hhhHHHHhcCCCCCcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECchh---hHHHHHHHHhhcCCCc-cCC
Confidence 999999887654 434444544 3 4578999999999999987 89999999987 45677 7899983 469
Q ss_pred EEEEEeCCCCceec--CC---CCCCHHHHHHHHHHHhcCCcC
Q 013976 229 VLAYTGNDDAKKHI--LD---GELTLDKIKTFGEDFLEGKLK 265 (432)
Q Consensus 229 ~i~i~~~~~~~~y~--~~---~~~~~~~i~~fi~~~~~g~l~ 265 (432)
++++++...+.+|. +. +.++.++|.+|++++++|++.
T Consensus 309 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~F~~d~~~Gkl~ 350 (350)
T 1sji_A 309 QIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDVLSGKIN 350 (350)
T ss_dssp EEEEEESSSSCEEESCSSCCSCCCCHHHHHHHHHHHHTSCC-
T ss_pred cEEEEecccccccccCCCcccccCCHHHHHHHHHHHhcCccC
Confidence 99999875554554 43 489999999999999999873
No 9
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-31 Score=241.83 Aligned_cols=231 Identities=19% Similarity=0.337 Sum_probs=184.2
Q ss_pred HhhCCCceeeCCHHHHHHHhhcCCeEEEEEecCCCcchHHHHHHHh-ccCCCceEEEeCcHHHHhHcCCCCCCCCCeEEE
Q 013976 42 KKIGPGIYNITTLDEAERVLTSETKVVLGYLNSLVGSESEVLADAS-RLEDDVNFYQTTNPDVAKIFHLDSKVNRPALVM 120 (432)
Q Consensus 42 ~~~~~~~~~i~~~~~l~~~~~~~~~~vv~f~~~~~~~~~~~f~~~a-~~~~~~~F~~~~~~~~~~~~~~~~~~~~p~i~l 120 (432)
++++|+++.|++.++++.|++.+++++||||.+.+++.++.|.++| .+++++.|+++.++++++++++.. |+|++
T Consensus 2 ~~~gP~v~~l~s~~~~~~~l~~~~v~vvgff~~~~~~~~~~f~~~A~~lr~~~~F~~~~~~~v~~~~~~~~----p~i~~ 77 (252)
T 2h8l_A 2 PLGSPASVPLRTEEEFKKFISDKDASIVGFFDDSFSEAHSEFLKAASNLRDNYRFAHTNVESLVNEYDDNG----EGIIL 77 (252)
T ss_dssp ----CCEEECCSHHHHHHHHTSSSCEEEEEESCTTSHHHHHHHHHHHHTTTTSCEEEECCHHHHHHHCSSS----EEEEE
T ss_pred CcCCCCceeecCHHHHHHHhhcCCeEEEEEECCCCChHHHHHHHHHHhcccCcEEEEEChHHHHHHhCCCC----CcEEE
Confidence 5789999999999999999999999999999998899999999999 778999999999999999999985 99999
Q ss_pred Eec------CCCceecccCCCCCHHHHHHHHHhcCCCceeecCCCchhhhccCCCcceEEEEEeC-c----chhhhHHHH
Q 013976 121 VKK------ETEKISYFADGKFDKSTIADFVFSNKLPLVTIFTRENAPSVFESPIKNQLLLFAVS-N----DSEKLLPVF 189 (432)
Q Consensus 121 ~~~------~~~~~~~y~~g~~~~~~l~~fi~~~~~p~v~~l~~~~~~~~~~~~~~~~i~~~~~~-~----~~~~~~~~~ 189 (432)
||+ .++....|..|+++.++|.+||..+++|+|.++|.+++..++. .+.+++|+... . ..+.+...+
T Consensus 78 fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~ 155 (252)
T 2h8l_A 78 FRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLIQG--KDLLIAYYDVDYEKNAKGSNYWRNRV 155 (252)
T ss_dssp ECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEECTTTHHHHSS--SSEEEEEECCBTTTBHHHHHHHHHHH
T ss_pred EcchhhcccccccccccCCCCcCHHHHHHHHHhcccCCeeecccccHhhhcC--CCeEEEEeecchhhcchhHHHHHHHH
Confidence 996 3456667734778999999999999999999999999999844 35555555433 2 133588899
Q ss_pred HHHHHhccCc---eEEEEEecCCcccccchhhhhCC--CCCCCcEEEEEeCCCCceecCCCCCCHHH--HHHHHHHHhcC
Q 013976 190 EEAAKSFKGK---LIFVYVQMDNEDVGKPVSEYFGI--TGEAPKVLAYTGNDDAKKHILDGELTLDK--IKTFGEDFLEG 262 (432)
Q Consensus 190 ~~~a~~~~~~---i~f~~vd~~~~~~~~~l~~~~~i--~~~~~P~i~i~~~~~~~~y~~~~~~~~~~--i~~fi~~~~~g 262 (432)
.++|++|+++ +.|+++|+.. +.++++.||+ ....+|+++|++. .+.+|.|.++++.++ |.+|++++++|
T Consensus 156 ~~vA~~~~~k~~~~~F~~~d~~~---~~~~~~~fgl~~~~~~~P~v~i~~~-~~~ky~~~~~~t~~~~~i~~F~~~~~~G 231 (252)
T 2h8l_A 156 MMVAKKFLDAGHKLNFAVASRKT---FSHELSDFGLESTAGEIPVVAIRTA-KGEKFVMQEEFSRDGKALERFLQDYFDG 231 (252)
T ss_dssp HHHHHHHHHTTCCCEEEEEETTT---THHHHGGGTCCCCSCSSCEEEEECT-TSCEEECCSCCCTTSHHHHHHHHHHHHT
T ss_pred HHHHHHccccCceEEEEEEchHH---HHHHHHHcCCCCccCCCCEEEEEeC-cCcEecCCcccCcchHHHHHHHHHHHCC
Confidence 9999999987 9999999987 4578999999 5567899999865 457888888899999 99999999999
Q ss_pred CcCccccCCCCCCCCCCceE
Q 013976 263 KLKPFFKSDPIPETNDGDVK 282 (432)
Q Consensus 263 ~l~~~~~se~~p~~~~~~v~ 282 (432)
+++|+++||++|+.++++|+
T Consensus 232 kl~~~~kSe~iPe~~~~pV~ 251 (252)
T 2h8l_A 232 NLKRYLKSEPIPESNDGAAA 251 (252)
T ss_dssp CSCCCC--------------
T ss_pred CccccccCCCCCCCCCCCCC
Confidence 99999999999998777764
No 10
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.98 E-value=3.8e-32 Score=260.28 Aligned_cols=281 Identities=20% Similarity=0.224 Sum_probs=205.6
Q ss_pred CCCcceeeeccCcccccCCCcccCccCCCCCChhHHHHHHHHhhCCCceeeCCHHHHHHHhhcCCeEEEEEecCCCcchH
Q 013976 1 MSWRTSTTFRASRRFTSSSTASIKLIMAAAPSKDAIVTWIKKKIGPGIYNITTLDEAERVLTSETKVVLGYLNSLVGSES 80 (432)
Q Consensus 1 ~~~Ptl~~f~~g~~~~~~~~~~~~~~Y~G~~~~~~i~~~l~~~~~~~~~~i~~~~~l~~~~~~~~~~vv~f~~~~~~~~~ 80 (432)
.+|||+++|++|+... ..|.|.++++.|++||.+++.+++..|++.++++. +..+..++|+||.+.+.+.+
T Consensus 81 ~~~Pt~~~f~~G~~~~--------~~~~G~~~~~~l~~~i~~~~~~~v~~l~~~~~l~~-l~~~~~~~v~ff~~~~~~~~ 151 (382)
T 2r2j_A 81 SKYPTLKLFRNGMMMK--------REYRGQRSVKALADYIRQQKSDPIQEIRDLAEITT-LDRSKRNIIGYFEQKDSDNY 151 (382)
T ss_dssp CEESEEEEEETTEEEE--------EECCSCCSHHHHHHHHHHHHSCCCEEC-------------CCEEEEEESCSSSHHH
T ss_pred CcCCEEEEEeCCcEee--------eeecCcchHHHHHHHHHHhccCCceecCCHHHHHH-hcCCCCEEEEEECCCCChhH
Confidence 3799999999998763 13999999999999999999999999998888988 67788899999998888889
Q ss_pred HHHHHHh-ccCCCceEEEeCcHHHHhHcCCCCCCCCCeEEEEecC--CCceecccCCCC-CHHHHHHHHHhcCCCceeec
Q 013976 81 EVLADAS-RLEDDVNFYQTTNPDVAKIFHLDSKVNRPALVMVKKE--TEKISYFADGKF-DKSTIADFVFSNKLPLVTIF 156 (432)
Q Consensus 81 ~~f~~~a-~~~~~~~F~~~~~~~~~~~~~~~~~~~~p~i~l~~~~--~~~~~~y~~g~~-~~~~l~~fi~~~~~p~v~~l 156 (432)
+.|.++| .+++++.|+++.+ ++++.+++.. .| ++|++. +.....| .|.+ +.++|..||..++.|++.++
T Consensus 152 ~~f~~~A~~~~~~~~F~~~~~-~~~~~~~v~~---~p--i~~~~~~~~~~~~~y-~g~~~~~~~l~~fi~~~~~p~v~el 224 (382)
T 2r2j_A 152 RVFERVANILHDDCAFLSAFG-DVSKPERYSG---DN--IIYKPPGHSAPDMVY-LGAMTNFDVTYNWIQDKCVPLVREI 224 (382)
T ss_dssp HHHHHHHHHHTTTCEEEEEES-CC-----------CE--EEEECSSSSSCCEEC-CSCTTCHHHHHHHHHHHHSCSSEEC
T ss_pred HHHHHHHHHhhccceEEEEeh-hhHHhhCCCC---Cc--eEECCCCCCCcCccc-CCCCCCHHHHHHHHHhcccCceEec
Confidence 9999998 7889999999887 6788888864 46 556654 2456788 8998 89999999999999999999
Q ss_pred CCCchhhhccCCCcceEEEEEeC--cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEEEEe
Q 013976 157 TRENAPSVFESPIKNQLLLFAVS--NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTG 234 (432)
Q Consensus 157 ~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~ 234 (432)
+.+++..++..+.+.+++|+.++ ..++.+...+.++|.++++++.|+++|+.. +..+++.||++..+.|++++.+
T Consensus 225 t~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~id~~~---~~~~~~~~gl~~~~~P~i~i~~ 301 (382)
T 2r2j_A 225 TFENGEELTEEGLPFLILFHMKEDTESLEIFQNEVARQLISEKGTINFLHADCDK---FRHPLLHIQKTPADCPVIAIDS 301 (382)
T ss_dssp CHHHHHHHHTTCCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTTTSEEEEEETTT---THHHHHHTTCCGGGCSEEEEEC
T ss_pred ChhhHHHHhcCCCcEEEEEecCCchHHHHHHHHHHHHHHHHhCCeeEEEEEchHH---hHHHHHHcCCCccCCCEEEEEc
Confidence 99999999888877777777665 345667778888888999999999999997 5578999999977789999986
Q ss_pred CCCCceecCC---CCCCHHHHHHHHHHHhcCCcCccccCCCCCCCC------CCceEEEecccchhhhhcCCCcEEE
Q 013976 235 NDDAKKHILD---GELTLDKIKTFGEDFLEGKLKPFFKSDPIPETN------DGDVKIVVGNNFDEIVLDESKDVLL 302 (432)
Q Consensus 235 ~~~~~~y~~~---~~~~~~~i~~fi~~~~~g~l~~~~~se~~p~~~------~~~v~~l~~~~~~~~~~~~~~~~lv 302 (432)
... .|.|. +.++.++|.+|++++++|+++|+++|+++|++. +..+.....++|+++.-.+.+..|+
T Consensus 302 ~~~--~y~~~~~~~~~~~~~i~~F~~d~~~Gkl~p~~kse~~P~~~~~~~~~~~~~~~~~~s~f~~l~~~~~~~~~~ 376 (382)
T 2r2j_A 302 FRH--MYVFGDFKDVLIPGKLKQFVFDLHSGKLHREFHHGPDPTDTAPGEQAQDVASSPPESSFQKLAPSEYRYTLL 376 (382)
T ss_dssp SSC--EEECCCSGGGGSTTHHHHHHHHHHHTTTSSCC-------------------CCCCCCSGGGGSCCTTTCEEC
T ss_pred chh--cCCCCccccccCHHHHHHHHHHHHCCCccccccCCCCCCCCCcccccccCCCCCCcccccccCCCccceecc
Confidence 533 35443 445789999999999999999999999999876 2223456778898865333455554
No 11
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.97 E-value=6.4e-29 Score=220.37 Aligned_cols=211 Identities=20% Similarity=0.345 Sum_probs=187.9
Q ss_pred CceeeCCHHHHHHHhhcCCeEEEEEecCCCcchHHHHHHHhccCCCceEEEeCcHHHHhHcCCCCCCCCCeEEEEecCCC
Q 013976 47 GIYNITTLDEAERVLTSETKVVLGYLNSLVGSESEVLADASRLEDDVNFYQTTNPDVAKIFHLDSKVNRPALVMVKKETE 126 (432)
Q Consensus 47 ~~~~i~~~~~l~~~~~~~~~~vv~f~~~~~~~~~~~f~~~a~~~~~~~F~~~~~~~~~~~~~~~~~~~~p~i~l~~~~~~ 126 (432)
.+.+|++.++++++++.+++++||||.+.+.+++..|.++|+...++.|+++.++++|+++++.. |+|++||..++
T Consensus 10 ~~~~l~s~~~~~~~l~~~~v~vVgff~~~~~~~~~~f~~~A~~l~~~~F~~t~~~~v~~~~~v~~----p~i~lfk~~~~ 85 (227)
T 4f9z_D 10 EPTWLTDVPAAMEFIAATEVAVIGFFQDLEIPAVPILHSMVQKFPGVSFGISTDSEVLTHYNITG----NTICLFRLVDN 85 (227)
T ss_dssp CCEECCSHHHHHHHHHTSSEEEEEECSCSCSTHHHHHHHHTTTCTTSEEEEECCHHHHHHTTCCS----SEEEEEETTTT
T ss_pred CCeeeCCHHHHHHHHhcCCeEEEEEecCCCchhHHHHHHHHHhCCCceEEEECCHHHHHHcCCCC----CeEEEEEecCc
Confidence 46799999999999999999999999999999999999999443699999999999999999975 99999998777
Q ss_pred ceecccC----CCCCHHHHHHHHHhcCCCceeecCCCchhhhccCCCcceEEEEEe-C-cchhhhHHHHHHHHHhccCce
Q 013976 127 KISYFAD----GKFDKSTIADFVFSNKLPLVTIFTRENAPSVFESPIKNQLLLFAV-S-NDSEKLLPVFEEAAKSFKGKL 200 (432)
Q Consensus 127 ~~~~y~~----g~~~~~~l~~fi~~~~~p~v~~l~~~~~~~~~~~~~~~~i~~~~~-~-~~~~~~~~~~~~~a~~~~~~i 200 (432)
....| . |+++.++|.+||..++.|+|.+++.+++..++..+.+.++++|.. + ++|..+++.|+++|+++++++
T Consensus 86 ~~~~~-~~~~~g~~~~~~l~~fi~~~~~plv~e~t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~i 164 (227)
T 4f9z_D 86 EQLNL-EDEDIESIDATKLSRFIEINSLHMVTEYNPVTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQGKI 164 (227)
T ss_dssp EEEEE-CHHHHHTCCHHHHHHHHHHHCCCSEEECCHHHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTTC
T ss_pred ccccc-cccccCCCCHHHHHHHHHHhCCCceeecCcccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhCCE
Confidence 77788 6 479999999999999999999999999999998887877776654 5 789999999999999999999
Q ss_pred EEEEEecCCcccccchhhhhCCCCCCCcEEEEEeCCCCceecCC-CCCCHHHHHHHHHHHhcCC
Q 013976 201 IFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILD-GELTLDKIKTFGEDFLEGK 263 (432)
Q Consensus 201 ~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~-~~~~~~~i~~fi~~~~~g~ 263 (432)
.|+++|++... +.++++.||++....|++++++..++.+|.+. +.++.++|.+|++++++|+
T Consensus 165 ~F~~vd~~~~~-~~~~l~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~Gk 227 (227)
T 4f9z_D 165 LFILVDSGMKE-NGKVISFFKLKESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGFLSGK 227 (227)
T ss_dssp EEEEEETTSGG-GHHHHHHTTCCGGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHHHTTC
T ss_pred EEEEeCCccHh-HHHHHHHcCCCcccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHHhCCC
Confidence 99999998644 55788999998667799999987766778774 7899999999999999986
No 12
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.96 E-value=3.8e-28 Score=217.93 Aligned_cols=218 Identities=22% Similarity=0.409 Sum_probs=190.0
Q ss_pred CceeecCCCchhhhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCc---eEEEEEecCCcccccchhhhhCCCCCC
Q 013976 151 PLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK---LIFVYVQMDNEDVGKPVSEYFGITGEA 226 (432)
Q Consensus 151 p~v~~l~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~---i~f~~vd~~~~~~~~~l~~~~~i~~~~ 226 (432)
..+..++.+++......++++++.||++| ++|+.+.+.|.++++++.+. +.|+.+|++. ++.+++.||+++.
T Consensus 15 ~~v~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~---~~~l~~~~~v~~~- 90 (241)
T 3idv_A 15 NGVLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATS---ASVLASRFDVSGY- 90 (241)
T ss_dssp TTEEEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTT---CHHHHHHTTCCSS-
T ss_pred CCcEEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccC---CHHHHHhcCCCcC-
Confidence 35888999999999888888899999999 99999999999999999876 9999999998 5689999999988
Q ss_pred CcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcCCcCccccCCCCCCCCCCceEEEecccchhhhhcCCCcEEEEEeC
Q 013976 227 PKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYA 306 (432)
Q Consensus 227 ~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g~l~~~~~se~~p~~~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~ 306 (432)
|+++++.++ ....+.|.++.+.|.+|+.+.+.....+ ....+..++..+|++.+ ..+++++|.||+
T Consensus 91 -Pt~~~~~~g--~~~~~~g~~~~~~l~~~i~~~~~~~~~~----------~~~~~~~~~~~~~~~~~-~~~~~~~v~f~a 156 (241)
T 3idv_A 91 -PTIKILKKG--QAVDYEGSRTQEEIVAKVREVSQPDWTP----------PPEVTLVLTKENFDEVV-NDADIILVEFYA 156 (241)
T ss_dssp -SEEEEEETT--EEEECCSCSCHHHHHHHHHHHHSTTCCC----------CCCSSEECCTTTHHHHH-HHCSEEEEEEEC
T ss_pred -CEEEEEcCC--CcccccCcccHHHHHHHHhhccCccccc----------ccccceeccHHHHHHhh-ccCCeEEEEEEC
Confidence 999998654 4456889999999999999987643221 23457889999999977 556899999999
Q ss_pred CCChhhhhhHHHHHHHHHHhcCC-CCEEEEEEeCCCccc--ccCCCCCCceEEEEeCCCcccCceeccCCCCHHHHHHHH
Q 013976 307 PWCGHCQAFEPTYNKLAKHLRGV-DSIVIAKMDGTTNEH--HRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFL 383 (432)
Q Consensus 307 ~~c~~c~~~~~~~~~la~~~~~~-~~~~~~~id~~~~~~--~~~~i~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi 383 (432)
+||++|+.+.|.|.+++..+.+. +.+.|+.+|++.+.. .+++|.++|++++|++|+.+ .|.|.++.+.|.+||
T Consensus 157 ~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~----~~~g~~~~~~l~~~l 232 (241)
T 3idv_A 157 PWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLKIFRKGRPY----DYNGPREKYGIVDYM 232 (241)
T ss_dssp TTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE----ECCSCCSHHHHHHHH
T ss_pred CCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEEEEEECCeEE----EecCCCCHHHHHHHH
Confidence 99999999999999999999763 469999999998876 68999999999999988654 799999999999999
Q ss_pred HhcCCCC
Q 013976 384 KKNASIP 390 (432)
Q Consensus 384 ~~~~~~~ 390 (432)
.+++...
T Consensus 233 ~~~~~~~ 239 (241)
T 3idv_A 233 IEQSGAA 239 (241)
T ss_dssp HHHTTCT
T ss_pred HhhhCCC
Confidence 9998754
No 13
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.92 E-value=7.9e-23 Score=193.38 Aligned_cols=309 Identities=16% Similarity=0.162 Sum_probs=239.7
Q ss_pred CceeeCCHHHHHHHhhcCCeEEEEEecCCCcc--hHHH-------HHHHh-ccCC-CceEEEeC---cHHHHhHcCCCCC
Q 013976 47 GIYNITTLDEAERVLTSETKVVLGYLNSLVGS--ESEV-------LADAS-RLED-DVNFYQTT---NPDVAKIFHLDSK 112 (432)
Q Consensus 47 ~~~~i~~~~~l~~~~~~~~~~vv~f~~~~~~~--~~~~-------f~~~a-~~~~-~~~F~~~~---~~~~~~~~~~~~~ 112 (432)
.+..+ +.+++++.+..+++++|.|+.+.|+. +... |.++| .+.+ .+.|+.++ +.++|+++++..
T Consensus 12 ~v~~l-~~~~f~~~i~~~~~~lV~F~a~wC~c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~- 89 (350)
T 1sji_A 12 RVVSL-TEKNFKQVLKKYDVLCLYYHESVSSDKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLGFDE- 89 (350)
T ss_dssp CCEEE-CHHHHHHHHTTCSEEEEEEECCSCSSSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHHTCCS-
T ss_pred ccEEC-CHHHHHHHHhhCCeEEEEEECCCCcchhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhcCCCc-
Confidence 36677 57889999988999999999998852 2333 77777 4444 58888753 678999999986
Q ss_pred CCCCeEEEEecCCCceecccCCCCCHHHHHHHHHhcCCCceeecC-CCchhhhcc-CCCcceEEEEEeCcchhhhHHHHH
Q 013976 113 VNRPALVMVKKETEKISYFADGKFDKSTIADFVFSNKLPLVTIFT-RENAPSVFE-SPIKNQLLLFAVSNDSEKLLPVFE 190 (432)
Q Consensus 113 ~~~p~i~l~~~~~~~~~~y~~g~~~~~~l~~fi~~~~~p~v~~l~-~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~ 190 (432)
+|++++|+.+ ....| .|..+.+.|..||.....|.+.+++ .+++..+.. .....++.||.++ |....+.|.
T Consensus 90 --~Pt~~~~~~g--~~~~~-~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~--~~~~~~~~~ 162 (350)
T 1sji_A 90 --EGSLYVLKGD--RTIEF-DGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERIEDQIKLIGFFKSE--ESEYYKAFE 162 (350)
T ss_dssp --TTEEEEEETT--EEEEE-CSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHCCSSCEEEEECSCT--TSHHHHHHH
T ss_pred --cceEEEEECC--cEEEe-cCCCCHHHHHHHHHHhcCCcceeccchHHHHHHhccCCCcEEEEEECCC--CcHHHHHHH
Confidence 7999999864 36688 9999999999999999999999996 466777765 4545556666553 556678899
Q ss_pred HHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEEEEeCCCCceecCCCC-CCHHHHHHHHHHHhcCCcCcccc
Q 013976 191 EAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGE-LTLDKIKTFGEDFLEGKLKPFFK 269 (432)
Q Consensus 191 ~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~-~~~~~i~~fi~~~~~g~l~~~~~ 269 (432)
++|..+++.+.|+.+. .+.+++.+|++ . |+++++.........|.|. ++.++|.+|+....-
T Consensus 163 ~~A~~~~~~~~f~~~~------~~~~~~~~~v~-~--p~i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~-------- 225 (350)
T 1sji_A 163 EAAEHFQPYIKFFATF------DKGVAKKLSLK-M--NEVDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQR-------- 225 (350)
T ss_dssp HHHHHTTTTSEEEEEC------CHHHHHHHTCC-T--TCEEEECTTCSSCEECSSSSCCHHHHHHHHHHHCC--------
T ss_pred HHHHhhccCcEEEEEC------CHHHHHHcCCC-C--CcEEEEeCCCCCceecCCCCCCHHHHHHHHHHcCc--------
Confidence 9999999999999875 34689999998 5 9998887654456678887 899999999998542
Q ss_pred CCCCCCCCCCceEEEecccchhhhhcCC-CcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc----
Q 013976 270 SDPIPETNDGDVKIVVGNNFDEIVLDES-KDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH---- 344 (432)
Q Consensus 270 se~~p~~~~~~v~~l~~~~~~~~~~~~~-~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~---- 344 (432)
+.+..++..++.+++.... +..++.|+.++|.+|..+.+.|.++|+.+++..++.|+.+|++.+..
T Consensus 226 ---------p~v~elt~~~~~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~~~~~~~~~ 296 (350)
T 1sji_A 226 ---------PTLRRLRPEDMFETWEDDLNGIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPDDFPLLVAY 296 (350)
T ss_dssp ---------CSEEECCTTTHHHHHHSCSSSEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGGGCHHHHHH
T ss_pred ---------cchhhcChhhHHHHhcCCCCCcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECchhhHHHHHH
Confidence 3488899999998763332 55566799999999999999999999999853479999999987764
Q ss_pred --ccCCCC-CCceEEEEeCCCcccCcee-c---cCCCCHHHHHHHHHhcCCCCC
Q 013976 345 --HRAKSD-GFPTILFFPAGNKSFDPIN-V---DVDRTVVALYKFLKKNASIPF 391 (432)
Q Consensus 345 --~~~~i~-~~P~i~~~~~g~~~~~~~~-y---~g~~~~~~l~~fi~~~~~~~~ 391 (432)
..+++. .+|+++++...+.. +... + .|..+.+.|.+||++..+.+.
T Consensus 297 ~~~~~gi~~~~P~~~i~~~~~~~-~~~~~~~~~~~~~~~~~i~~F~~d~~~Gkl 349 (350)
T 1sji_A 297 WEKTFKIDLFKPQIGVVNVTDAD-SVWMEIPDDDDLPTAEELEDWIEDVLSGKI 349 (350)
T ss_dssp HHHHCCSCTTSCEEEEEESSSSC-EEESCSSCCSCCCCHHHHHHHHHHHHTSCC
T ss_pred HHhhcCCCccCCcEEEEeccccc-ccccCCCcccccCCHHHHHHHHHHHhcCcc
Confidence 247777 58999999763321 1111 2 358899999999999876543
No 14
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.91 E-value=2.1e-24 Score=191.59 Aligned_cols=194 Identities=14% Similarity=0.171 Sum_probs=158.0
Q ss_pred ceEEEEEe-C-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEEEEeCCCCceecCCCCCC
Q 013976 171 NQLLLFAV-S-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELT 248 (432)
Q Consensus 171 ~~i~~~~~-~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~~~ 248 (432)
.+++|+++ | ++|+.+.+.++++|+. .+++.|+.+|+++.+ ++.+++.||+.+. |+++++.++......+.|..+
T Consensus 25 ~lv~f~~~~~C~~C~~~~~~~~~la~~-~~~v~~~~vd~~~~~-~~~~~~~~~v~~~--Pt~~~~~~g~~~~~~~~G~~~ 100 (226)
T 1a8l_A 25 KLIVFVRKDHCQYCDQLKQLVQELSEL-TDKLSYEIVDFDTPE-GKELAKRYRIDRA--PATTITQDGKDFGVRYFGLPA 100 (226)
T ss_dssp EEEEEECSSSCTTHHHHHHHHHHHHTT-CTTEEEEEEETTSHH-HHHHHHHTTCCSS--SEEEEEETTBCCSEEEESCCC
T ss_pred EEEEEecCCCCchhHHHHHHHHHHHhh-CCceEEEEEeCCCcc-cHHHHHHcCCCcC--ceEEEEcCCceeeEEEeccCc
Confidence 35678888 9 9999999999999965 567999999998733 3589999999987 999998665433456778888
Q ss_pred HHHHHHHHHHHhcCCcCccccCCCCCCCCCCceEEEecccchhhhhcCCCcE-EEEEeCCCChhhhhhHHHHHHHHHHhc
Q 013976 249 LDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDV-LLEIYAPWCGHCQAFEPTYNKLAKHLR 327 (432)
Q Consensus 249 ~~~i~~fi~~~~~g~l~~~~~se~~p~~~~~~v~~l~~~~~~~~~~~~~~~~-lv~f~~~~c~~c~~~~~~~~~la~~~~ 327 (432)
.+.+.+|+..++.... .+..++..+|+... ..++++ +|.||++||++|+.+.|.|.+++..+.
T Consensus 101 ~~~l~~~l~~~l~~~~---------------~~~~l~~~~~~~~~-~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~ 164 (226)
T 1a8l_A 101 GHEFAAFLEDIVDVSR---------------EETNLMDETKQAIR-NIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENT 164 (226)
T ss_dssp TTHHHHHHHHHHHHHH---------------TCCCCCHHHHHHHT-TCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcC---------------CCCCCCHHHHHHHH-hcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcc
Confidence 8999999999874221 12335667777754 445666 999999999999999999999999997
Q ss_pred C--CCCEEEEEEeCCCccc--ccCCCCCCceEEEEeCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 328 G--VDSIVIAKMDGTTNEH--HRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 328 ~--~~~~~~~~id~~~~~~--~~~~i~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
+ ..++.++.+|++.+.. .+++|.++|++++|++|+... .+.|..+.+.|.+||++++
T Consensus 165 ~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~---~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 165 KAGKGKILGDMVEAIEYPEWADQYNVMAVPKIVIQVNGEDRV---EFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp HTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEEEEEETTEEEE---EEESCCCHHHHHHHHHHHH
T ss_pred cccCCcEEEEEEEcccCHHHHHhCCCcccCeEEEEeCCceeE---EEcCCCCHHHHHHHHHHhh
Confidence 1 1269999999998776 689999999999999887653 7999999999999998864
No 15
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.91 E-value=2e-22 Score=191.36 Aligned_cols=315 Identities=14% Similarity=0.138 Sum_probs=244.8
Q ss_pred CceeeCCHHHHHHHhhcCCeEEEEEecCCCcc--hHH-------HHHHHh-ccCC-CceEEEeC---cHHHHhHcCCCCC
Q 013976 47 GIYNITTLDEAERVLTSETKVVLGYLNSLVGS--ESE-------VLADAS-RLED-DVNFYQTT---NPDVAKIFHLDSK 112 (432)
Q Consensus 47 ~~~~i~~~~~l~~~~~~~~~~vv~f~~~~~~~--~~~-------~f~~~a-~~~~-~~~F~~~~---~~~~~~~~~~~~~ 112 (432)
.+..+ +.+.++++++.++.++|-|+.+.|++ ... .|..+| .+.+ .+.|+.+. ++++|+++++..
T Consensus 14 ~v~~l-t~~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~V~~- 91 (367)
T 3us3_A 14 RVINV-NAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGLTE- 91 (367)
T ss_dssp CCEEC-CTTTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHTCCS-
T ss_pred ccEEC-CHHHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcCCCc-
Confidence 46666 46889999999999999999999976 122 466777 4444 58888754 678999999986
Q ss_pred CCCCeEEEEecCCCceecccCCCCCHHHHHHHHHhcCCCceeecCC-Cchhhhcc-CCCcceEEEEEeCcchhhhHHHHH
Q 013976 113 VNRPALVMVKKETEKISYFADGKFDKSTIADFVFSNKLPLVTIFTR-ENAPSVFE-SPIKNQLLLFAVSNDSEKLLPVFE 190 (432)
Q Consensus 113 ~~~p~i~l~~~~~~~~~~y~~g~~~~~~l~~fi~~~~~p~v~~l~~-~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~ 190 (432)
+|++++|+.+ ....| .|..+.+.|..||.....|.+..++. +++..+.. ....++|.||.+ .|....+.|.
T Consensus 92 --~PTl~~f~~G--~~~~y-~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~vv~ff~~--~~~~~~~~f~ 164 (367)
T 3us3_A 92 --EDSIYVFKED--EVIEY-DGEFSADTLVEFLLDVLEDPVELIEGERELQAFENIEDEIKLIGYFKN--KDSEHYKAFK 164 (367)
T ss_dssp --TTEEEEEETT--EEEEC-CSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHHCCSSCEEEEECSC--TTCHHHHHHH
T ss_pred --CceEEEEECC--cEEEe-CCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhccCCCcEEEEEECC--CCchHHHHHH
Confidence 7999999953 45688 99999999999999999999999964 67777776 444556666655 3556778899
Q ss_pred HHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEEEEeCCCCceecCCCC-CCHHHHHHHHHHHhcCCcCcccc
Q 013976 191 EAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGE-LTLDKIKTFGEDFLEGKLKPFFK 269 (432)
Q Consensus 191 ~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~-~~~~~i~~fi~~~~~g~l~~~~~ 269 (432)
++|..+++.+.|+.+.. ..+++.+|++. |+|+++......+..|.|. ++.+.|.+||....-
T Consensus 165 ~~A~~~~~~~~F~~~~~------~~~~~~~~v~~---p~i~lf~~~~~~~~~y~g~~~~~~~l~~fi~~~~~-------- 227 (367)
T 3us3_A 165 EAAEEFHPYIPFFATFD------SKVAKKLTLKL---NEIDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHRR-------- 227 (367)
T ss_dssp HHHHHHTTTSCEEEECC------HHHHHHHTCCT---TCEEEECTTCSSCEECSSSSCCHHHHHHHHHHTCS--------
T ss_pred HHHHhhcCCcEEEEECC------HHHHHHcCCCC---CeEEEEcCCCCCCeecCCCCCCHHHHHHHHHHcCc--------
Confidence 99999999999998753 36789999973 8898887654556678884 999999999998542
Q ss_pred CCCCCCCCCCceEEEecccchhhhhcC-CCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcccc---
Q 013976 270 SDPIPETNDGDVKIVVGNNFDEIVLDE-SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHH--- 345 (432)
Q Consensus 270 se~~p~~~~~~v~~l~~~~~~~~~~~~-~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~~--- 345 (432)
+.|..++..++.+.+... .++.++.|+.++|..|..+...+.++|+.+++.+++.|+.+|+......
T Consensus 228 ---------p~v~elt~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~~~~l~~ 298 (367)
T 3us3_A 228 ---------STLRKLKPESMYETWEDDMDGIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDFPLLVPY 298 (367)
T ss_dssp ---------CSEEECCGGGHHHHHHSCBTTEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGCTTTHHH
T ss_pred ---------cceeecChhhHHHHHhhccCCcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccchhHHHH
Confidence 348889999988766443 4577888999999999999999999999999854699999999987642
Q ss_pred ---cCCCC-CCceEEEEeCCCcccCceecc---CCCCHHHHHHHHHhcCCCCCcccCC
Q 013976 346 ---RAKSD-GFPTILFFPAGNKSFDPINVD---VDRTVVALYKFLKKNASIPFKIQKP 396 (432)
Q Consensus 346 ---~~~i~-~~P~i~~~~~g~~~~~~~~y~---g~~~~~~l~~fi~~~~~~~~~~~~~ 396 (432)
.+++. .+|+++++.......+...+. +..+.++|.+|+++....+.+....
T Consensus 299 ~~~~fgl~~~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~~~Gkl~p~~~ 356 (367)
T 3us3_A 299 WEKTFDIDLSAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDVLEGEINTEDD 356 (367)
T ss_dssp HHHHHTCCTTSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHHHHHHHHTSSCC---
T ss_pred HHHhcCCCCCCCeEEEEecccccceeecCCcccccCCHHHHHHHHHHHHcCCcCcccc
Confidence 26776 899999997543310111344 3689999999999999888776533
No 16
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.90 E-value=1.5e-23 Score=186.30 Aligned_cols=191 Identities=13% Similarity=0.096 Sum_probs=157.7
Q ss_pred CCCcceEEEE-----EeC-cchhhhHHHHHHHHHhc--cCceEEEEEecCCcccccchhhhhCCCCCCCcEEEEEeCCCC
Q 013976 167 SPIKNQLLLF-----AVS-NDSEKLLPVFEEAAKSF--KGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDA 238 (432)
Q Consensus 167 ~~~~~~i~~~-----~~~-~~~~~~~~~~~~~a~~~--~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~~~~~ 238 (432)
...++.+++| ++| ++|+.+.+.|.++|..+ .+++.|+.+||+. ++.+|+.|||+++ |+++++.. +.
T Consensus 19 ~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~---~~~l~~~~~v~~~--Ptl~~~~~-~~ 92 (229)
T 2ywm_A 19 FKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFT---HKEETEKYGVDRV--PTIVIEGD-KD 92 (229)
T ss_dssp CCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTT---CHHHHHHTTCCBS--SEEEEESS-SC
T ss_pred ccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcc---cHHHHHHcCCCcC--cEEEEECC-Cc
Confidence 3446677777 677 89999999999999998 6789999999998 6799999999988 99999963 33
Q ss_pred ceecCCCCCCHHHHHHHHHHHhcCCcCccccCCCCCCCCCCceEEEecccchhhhhcCCCcE-EEEEeCCCChhhhhhHH
Q 013976 239 KKHILDGELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDV-LLEIYAPWCGHCQAFEP 317 (432)
Q Consensus 239 ~~y~~~~~~~~~~i~~fi~~~~~g~l~~~~~se~~p~~~~~~v~~l~~~~~~~~~~~~~~~~-lv~f~~~~c~~c~~~~~ 317 (432)
....|.|..+.+.+..|+...+... +.+..++..+|+..+ ..++++ +|.||++||++|+.+.|
T Consensus 93 ~~~~~~G~~~~~~l~~~~~~~~~~~---------------~~~~~l~~~~~~~~~-~~~~~~~~v~F~a~wC~~C~~~~~ 156 (229)
T 2ywm_A 93 YGIRYIGLPAGLEFTTLINGIFHVS---------------QRKPQLSEKTLELLQ-VVDIPIEIWVFVTTSCGYCPSAAV 156 (229)
T ss_dssp CCEEEESCCCTTHHHHHHHHHHHHH---------------TTCCSCCHHHHHHHT-TCCSCEEEEEEECTTCTTHHHHHH
T ss_pred ccceecCCccHHHHHHHHHHHHhcc---------------CCccCCCHHHHHHHH-hcCCCeEEEEEECCCCcchHHHHH
Confidence 4566789899999999999876411 113446778888865 444555 88899999999999999
Q ss_pred HHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEEEEeCCCcccCceeccCCCCHHHHHHHHHhcCC
Q 013976 318 TYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 388 (432)
Q Consensus 318 ~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 388 (432)
.|.+++..+. ++.++.+|++.+.. .+++|.++|++++ +|+ + ..|.|..+.+.|.+||.+.++
T Consensus 157 ~~~~~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~--~G~-~---~~~~G~~~~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 157 MAWDFALAND---YITSKVIDASENQDLAEQFQVVGVPKIVI--NKG-V---AEFVGAQPENAFLGYIMAVYE 220 (229)
T ss_dssp HHHHHHHHCT---TEEEEEEEGGGCHHHHHHTTCCSSSEEEE--GGG-T---EEEESCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHCC---CeEEEEEECCCCHHHHHHcCCcccCEEEE--CCE-E---EEeeCCCCHHHHHHHHHHHhh
Confidence 9999999983 69999999998776 6899999999999 665 3 269999999999999998764
No 17
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.88 E-value=1.4e-21 Score=174.60 Aligned_cols=194 Identities=12% Similarity=0.078 Sum_probs=151.3
Q ss_pred CcceEEEEEeC---cchhhhHHHHHHHHHh---ccCc--eEEEEEecCCcccccchhhhhCCCCCCCcEEEEEeCCCCce
Q 013976 169 IKNQLLLFAVS---NDSEKLLPVFEEAAKS---FKGK--LIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKK 240 (432)
Q Consensus 169 ~~~~i~~~~~~---~~~~~~~~~~~~~a~~---~~~~--i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~ 240 (432)
.++.+.||++| +.|+.+.+.+.++|+. ++++ +.|+.+|+++ ++.+++.|||+.. |+++++ ++ .
T Consensus 26 ~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~---~~~~~~~~gv~~~--Pt~~i~-~g---~ 96 (243)
T 2hls_A 26 NPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRES---DSDKFSEFKVERV--PTVAFL-GG---E 96 (243)
T ss_dssp SCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTT---THHHHHHTTCCSS--SEEEET-TT---T
T ss_pred CCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCc---CHHHHHhcCCCcC--CEEEEE-CC---c
Confidence 47788899988 6799999999999998 5555 9999999987 5689999999977 999988 33 3
Q ss_pred ecCCCCCCHHHHHHHHHHHhcCCcCccccCCCCCCCCCCceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHH
Q 013976 241 HILDGELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYN 320 (432)
Q Consensus 241 y~~~~~~~~~~i~~fi~~~~~g~l~~~~~se~~p~~~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~ 320 (432)
..|.|..+...+..|+..++.+...+. .++..+++....-.++.+++.||+|||++|+.+.|.|+
T Consensus 97 ~~~~G~~~~~~l~~fv~~~l~~~~~~~---------------~l~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~ 161 (243)
T 2hls_A 97 VRWTGIPAGEEIRALVEVIMRLSEDES---------------GLEDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAH 161 (243)
T ss_dssp EEEESCCCTTHHHHHHHHHHHHHTTCC---------------CCCHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHH
T ss_pred eeEcCCCcHHHHHHHHHHHHhccCCCC---------------CCCHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHH
Confidence 345676777899999998875322211 12223344322223456789999999999999999999
Q ss_pred HHHHHhc--CCCCEEEEEEeCCCccc--ccCCCCCCceEEEEeCCCcccCceeccCCCCHHHHHHHHHhcCCCCCcc
Q 013976 321 KLAKHLR--GVDSIVIAKMDGTTNEH--HRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPFKI 393 (432)
Q Consensus 321 ~la~~~~--~~~~~~~~~id~~~~~~--~~~~i~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~~~~ 393 (432)
+++..+. +.+++.++.+|++.+.. .+++|.++||+++ +|.. .|.|.++.+.|.+||.+.+......
T Consensus 162 ~la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i--~G~~-----~~~G~~~~~~l~~~l~~~~~~~~~~ 231 (243)
T 2hls_A 162 MFAYEAWKQGNPVILSEAVEAYENPDIADKYGVMSVPSIAI--NGYL-----VFVGVPYEEDFLDYVKSAAEGRLTV 231 (243)
T ss_dssp HHHHHHHHTTCCCEEEEEEETTTCHHHHHHTTCCSSSEEEE--TTEE-----EEESCCCHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHcccccCCcEEEEEEECccCHHHHHHcCCeeeCeEEE--CCEE-----EEeCCCCHHHHHHHHHHHhhccccc
Confidence 9999984 22379999999998876 6899999999988 5542 5999999999999999998754333
No 18
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.87 E-value=5.2e-20 Score=175.01 Aligned_cols=238 Identities=16% Similarity=0.256 Sum_probs=187.3
Q ss_pred Ccceeeecc--CcccccCCCcccCccCCCCCChhHHHHHHHHhhCCCceeeCCHHHHHHHhhc-CCeEEEEEecCCCcc-
Q 013976 3 WRTSTTFRA--SRRFTSSSTASIKLIMAAAPSKDAIVTWIKKKIGPGIYNITTLDEAERVLTS-ETKVVLGYLNSLVGS- 78 (432)
Q Consensus 3 ~Ptl~~f~~--g~~~~~~~~~~~~~~Y~G~~~~~~i~~~l~~~~~~~~~~i~~~~~l~~~~~~-~~~~vv~f~~~~~~~- 78 (432)
-|+|.+||. +.... |.|..+.++|.+||+....|.+.+++. +.+..++.. .+.++|.|+...+.+
T Consensus 82 ~~~i~lfk~f~~~~~~----------~~g~~~~~~i~~fi~~~~~p~v~~~~~-~~~~~~~~~~~~~~~v~F~~~~~~~~ 150 (361)
T 3uem_A 82 KDGVVLFKKFDEGRNN----------FEGEVTKENLLDFIKHNQLPLVIEFTE-QTAPKIFGGEIKTHILLFLPKSVSDY 150 (361)
T ss_dssp SSEEEEEESSTTSEEE----------CCSCCCHHHHHHHHHHHSSCSEEECST-TTHHHHHSCSCCEEEEEECCSSSSSH
T ss_pred CCeEEEEEecCCCccc----------cCCcCCHHHHHHHHHHcCCCcceecCc-ccHHHHhcCCCCcEEEEEEeCCchhH
Confidence 389999986 33333 999999999999999999999988864 556666654 456677777665543
Q ss_pred --hHHHHHHHh-ccCCCceEEEeC-----cHHHHhHcCCCCCCCCCeEEEEecCCCceecc--cCCCCCHHHHHHHHHhc
Q 013976 79 --ESEVLADAS-RLEDDVNFYQTT-----NPDVAKIFHLDSKVNRPALVMVKKETEKISYF--ADGKFDKSTIADFVFSN 148 (432)
Q Consensus 79 --~~~~f~~~a-~~~~~~~F~~~~-----~~~~~~~~~~~~~~~~p~i~l~~~~~~~~~~y--~~g~~~~~~l~~fi~~~ 148 (432)
....|.++| ++++.+.|+.+. ...+|+.+|+.. ...|++++++..+ ....| ..|.++.+.|..|+...
T Consensus 151 ~~~~~~~~~~A~~~~~~i~f~~vd~~~~~~~~~~~~fgi~~-~~~P~~~~~~~~~-~~~ky~~~~~~~~~~~l~~fi~~~ 228 (361)
T 3uem_A 151 DGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKK-EECPAVRLITLEE-EMTKYKPESEELTAERITEFCHRF 228 (361)
T ss_dssp HHHHHHHHHHHGGGTTTCEEEEECTTSGGGHHHHHHTTCCT-TTCSEEEEEECC---CCEECCSSCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCceEEEEecCChHHHHHHHHHcCCCc-cCCccEEEEEcCC-cccccCCCccccCHHHHHHHHHHH
Confidence 456788888 677889999854 457899999973 2469999998743 33344 13789999999999874
Q ss_pred CC------------------CceeecCCCchhhhc-cCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCc--eEEEEEe
Q 013976 149 KL------------------PLVTIFTRENAPSVF-ESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK--LIFVYVQ 206 (432)
Q Consensus 149 ~~------------------p~v~~l~~~~~~~~~-~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~--i~f~~vd 206 (432)
.. ..+..++.+++..+. ..++.+++.||++| ++|+.+.+.|.++|..++++ +.|+.+|
T Consensus 229 l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd 308 (361)
T 3uem_A 229 LEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMD 308 (361)
T ss_dssp HTTCSCCCCBCCCCCTTTTTSSSEEECTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEE
T ss_pred hcCCCcccccCCCCCcccccCCcEEeecCchhhhcccCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEE
Confidence 21 237788899998865 56778889999999 99999999999999999875 9999999
Q ss_pred cCCcccccchhhhhCCCCCCCcEEEEEeCC-CCceecCCCCCCHHHHHHHHHHHh
Q 013976 207 MDNEDVGKPVSEYFGITGEAPKVLAYTGND-DAKKHILDGELTLDKIKTFGEDFL 260 (432)
Q Consensus 207 ~~~~~~~~~l~~~~~i~~~~~P~i~i~~~~-~~~~y~~~~~~~~~~i~~fi~~~~ 260 (432)
+.... ++.|++.++ |+++++..+ +.....+.|.++.+.|.+||.+..
T Consensus 309 ~~~~~-----~~~~~v~~~--Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~ 356 (361)
T 3uem_A 309 STANE-----VEAVKVHSF--PTLKFFPASADRTVIDYNGERTLDGFKKFLESGG 356 (361)
T ss_dssp TTTCB-----CSSCCCCSS--SEEEEECSSSSCCCEECCSCSSHHHHHHHHTTTS
T ss_pred CCccc-----hhhcCCccc--CeEEEEECCCCcceeEecCCCCHHHHHHHHHhcC
Confidence 98742 688999998 999999655 345678899999999999998753
No 19
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.85 E-value=1.3e-19 Score=173.35 Aligned_cols=307 Identities=15% Similarity=0.183 Sum_probs=214.3
Q ss_pred ceeeCCHHHHHHHhhcCCeEEEEEecCCCcc---hHHHHHHHh-cc------CCCceEEEeC---cHHHHhHcCCCCCCC
Q 013976 48 IYNITTLDEAERVLTSETKVVLGYLNSLVGS---ESEVLADAS-RL------EDDVNFYQTT---NPDVAKIFHLDSKVN 114 (432)
Q Consensus 48 ~~~i~~~~~l~~~~~~~~~~vv~f~~~~~~~---~~~~f~~~a-~~------~~~~~F~~~~---~~~~~~~~~~~~~~~ 114 (432)
+..|+ .++++.++..++.++|.|+.+.|++ +...|.++| .+ .+.+.|+.+. +.++|+++++..
T Consensus 7 v~~l~-~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~--- 82 (382)
T 2r2j_A 7 ITSLD-TENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISK--- 82 (382)
T ss_dssp -CBCC-TTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCE---
T ss_pred eEECC-HHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCc---
Confidence 55664 5778888888899999999999865 556677777 44 3458888854 678999999986
Q ss_pred CCeEEEEecCCCcee-cccCCCCCHHHHHHHHHhcCCCceeecCC-CchhhhccCCCcceEEEEEeCcchhhhHHHHHHH
Q 013976 115 RPALVMVKKETEKIS-YFADGKFDKSTIADFVFSNKLPLVTIFTR-ENAPSVFESPIKNQLLLFAVSNDSEKLLPVFEEA 192 (432)
Q Consensus 115 ~p~i~l~~~~~~~~~-~y~~g~~~~~~l~~fi~~~~~p~v~~l~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 192 (432)
+|++++|+.+. ... .| .|..+.+.|..||.....|.+..++. +.+.. +.....+++.||.++ +......|.++
T Consensus 83 ~Pt~~~f~~G~-~~~~~~-~G~~~~~~l~~~i~~~~~~~v~~l~~~~~l~~-l~~~~~~~v~ff~~~--~~~~~~~f~~~ 157 (382)
T 2r2j_A 83 YPTLKLFRNGM-MMKREY-RGQRSVKALADYIRQQKSDPIQEIRDLAEITT-LDRSKRNIIGYFEQK--DSDNYRVFERV 157 (382)
T ss_dssp ESEEEEEETTE-EEEEEC-CSCCSHHHHHHHHHHHHSCCCEEC-------------CCEEEEEESCS--SSHHHHHHHHH
T ss_pred CCEEEEEeCCc-Eeeeee-cCcchHHHHHHHHHHhccCCceecCCHHHHHH-hcCCCCEEEEEECCC--CChhHHHHHHH
Confidence 79999998542 223 58 89999999999999998888888864 45666 455555667777554 22345679999
Q ss_pred HHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEEEEeCC-CCceecCCCCC-CHHHHHHHHHHHhcCCcCccccC
Q 013976 193 AKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGND-DAKKHILDGEL-TLDKIKTFGEDFLEGKLKPFFKS 270 (432)
Q Consensus 193 a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~~~-~~~~y~~~~~~-~~~~i~~fi~~~~~g~l~~~~~s 270 (432)
|..+++.+.|+...+. +++.+++++. | +++...+ ......|.|.+ +.+.|.+||....-
T Consensus 158 A~~~~~~~~F~~~~~~-------~~~~~~v~~~--p-i~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~--------- 218 (382)
T 2r2j_A 158 ANILHDDCAFLSAFGD-------VSKPERYSGD--N-IIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCV--------- 218 (382)
T ss_dssp HHHHTTTCEEEEEESC-------C--------C--E-EEEECSSSSSCCEECCSCTTCHHHHHHHHHHHHS---------
T ss_pred HHHhhccceEEEEehh-------hHHhhCCCCC--c-eEECCCCCCCcCcccCCCCCCHHHHHHHHHhccc---------
Confidence 9999998998887752 3567788776 7 6566542 23456788988 99999999998652
Q ss_pred CCCCCCCCCceEEEecccchhhhhcCCCcEEEEEeCCCCh-hhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccC
Q 013976 271 DPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCG-HCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRA 347 (432)
Q Consensus 271 e~~p~~~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~-~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~ 347 (432)
+.+..++..++.+++ ..+.+++|+|+.++|. .|+.+...+.+++..+++ ++.|+.+|++.+.. ..+
T Consensus 219 --------p~v~elt~~~~~~~~-~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~--~i~f~~id~~~~~~~~~~~ 287 (382)
T 2r2j_A 219 --------PLVREITFENGEELT-EEGLPFLILFHMKEDTESLEIFQNEVARQLISEKG--TINFLHADCDKFRHPLLHI 287 (382)
T ss_dssp --------CSSEECCHHHHHHHH-TTCCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTT--TSEEEEEETTTTHHHHHHT
T ss_pred --------CceEecChhhHHHHh-cCCCcEEEEEecCCchHHHHHHHHHHHHHHHHhCC--eeEEEEEchHHhHHHHHHc
Confidence 236788999998854 6678899999999874 455555666666666665 79999999998765 567
Q ss_pred CCC--CCceEEEEeCCCcccCceeccCCCCHHHHHHHHHhcCCCCCccc
Q 013976 348 KSD--GFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPFKIQ 394 (432)
Q Consensus 348 ~i~--~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~~~~~ 394 (432)
+++ .+|.++++..++.. ....+.+..+.+.|.+||++..+.+....
T Consensus 288 gl~~~~~P~i~i~~~~~~y-~~~~~~~~~~~~~i~~F~~d~~~Gkl~p~ 335 (382)
T 2r2j_A 288 QKTPADCPVIAIDSFRHMY-VFGDFKDVLIPGKLKQFVFDLHSGKLHRE 335 (382)
T ss_dssp TCCGGGCSEEEEECSSCEE-ECCCSGGGGSTTHHHHHHHHHHHTTTSSC
T ss_pred CCCccCCCEEEEEcchhcC-CCCccccccCHHHHHHHHHHHHCCCcccc
Confidence 776 78999998654321 11123455677999999999987766543
No 20
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.83 E-value=3.6e-20 Score=149.53 Aligned_cols=127 Identities=21% Similarity=0.333 Sum_probs=113.9
Q ss_pred cCCCceeecCCCchhhhccCCCcceEEEEEeCcchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCC
Q 013976 148 NKLPLVTIFTRENAPSVFESPIKNQLLLFAVSNDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAP 227 (432)
Q Consensus 148 ~~~p~v~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~ 227 (432)
++.|++.+++.+++..++..+.++++.||+++++|+.+.+.++++|++|++++.|+++|.++ ++.+++.||+++...
T Consensus 3 c~~plv~~~t~~~f~~~~~~~~pv~v~f~a~~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~---~~~~a~~~gi~~~~i 79 (133)
T 2djk_A 3 LGSPLIGEIGPETYSDYMSAGIPLAYIFAETAEERKELSDKLKPIAEAQRGVINFGTIDAKA---FGAHAGNLNLKTDKF 79 (133)
T ss_dssp CSCCCSEECCHHHHHHHHHTTSCEEEEECSCSSSHHHHHHHHHHHHHSSTTTSEEEEECTTT---TGGGTTTTTCCSSSS
T ss_pred cccCceeccChHHHHHHhcCCCCEEEEEecChhhHHHHHHHHHHHHHHhCCeEEEEEEchHH---hHHHHHHcCCCcccC
Confidence 57899999999999998887778788888888999999999999999999999999999987 568999999998667
Q ss_pred cEEEEEeCCCCceecCC--CCCCHHHHHHHHHHHhcCCcCccccCCCCCCCC
Q 013976 228 KVLAYTGNDDAKKHILD--GELTLDKIKTFGEDFLEGKLKPFFKSDPIPETN 277 (432)
Q Consensus 228 P~i~i~~~~~~~~y~~~--~~~~~~~i~~fi~~~~~g~l~~~~~se~~p~~~ 277 (432)
|+++++...+++.|.+. |.++.+.|.+|++++++|+++|+++||++|+++
T Consensus 80 Ptl~i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~l~Gkl~p~~kSe~iP~~~ 131 (133)
T 2djk_A 80 PAFAIQEVAKNQKFPFDQEKEITFEAIKAFVDDFVAGKIEPSIKSEPIPEKQ 131 (133)
T ss_dssp SEEEEECTTTCCBCCCCSSSCCCHHHHHHHHHHHHHTCCCCSSCCCCCCTTS
T ss_pred CEEEEEecCcCcccCCCCccccCHHHHHHHHHHHHcCCcCccccCCCCCCcC
Confidence 99999976445667776 999999999999999999999999999999874
No 21
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.82 E-value=6e-18 Score=167.03 Aligned_cols=306 Identities=17% Similarity=0.188 Sum_probs=230.3
Q ss_pred ceeeCCHHHHHHHhhcC---CeEEEEEecCCCcc---hHHHHHHHh-ccCCCceEEEeC---cHHHHhHcCCCCCCCCCe
Q 013976 48 IYNITTLDEAERVLTSE---TKVVLGYLNSLVGS---ESEVLADAS-RLEDDVNFYQTT---NPDVAKIFHLDSKVNRPA 117 (432)
Q Consensus 48 ~~~i~~~~~l~~~~~~~---~~~vv~f~~~~~~~---~~~~f~~~a-~~~~~~~F~~~~---~~~~~~~~~~~~~~~~p~ 117 (432)
+..| +.+++++++..+ +.++|.|+.+.|++ ....|.++| .+.+.+.|+.++ +.++|+++|+.. .|+
T Consensus 3 v~~l-~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~---~Pt 78 (481)
T 3f8u_A 3 VLEL-TDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSG---YPT 78 (481)
T ss_dssp CEEE-CTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEETTTCHHHHHHTTCCE---ESE
T ss_pred eEEe-cHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEECCCCHHHHHhcCCCC---CCE
Confidence 5566 468888998877 89999999999865 556788888 566668888865 778999999986 799
Q ss_pred EEEEecCCCceecccCCCCCHHHHHHHHHhcCCCceeecC-CCchhhhccCCCcceEEEEEeCcchhhhHHHHHHHHHhc
Q 013976 118 LVMVKKETEKISYFADGKFDKSTIADFVFSNKLPLVTIFT-RENAPSVFESPIKNQLLLFAVSNDSEKLLPVFEEAAKSF 196 (432)
Q Consensus 118 i~l~~~~~~~~~~y~~g~~~~~~l~~fi~~~~~p~v~~l~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~ 196 (432)
+++|+.+ +....| .|..+.+.|..|+.....|.+.+++ .+.+..+.......++.||.++ +......|.++|..+
T Consensus 79 l~~~~~g-~~~~~~-~G~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~vv~~~~~~--~~~~~~~f~~~a~~~ 154 (481)
T 3f8u_A 79 LKIFRDG-EEAGAY-DGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFISDKDASIVGFFDDS--FSEAHSEFLKAASNL 154 (481)
T ss_dssp EEEEETT-EEEEEC-CSCSSHHHHHHHHHHHTSCSEEEECSHHHHHHHTTSSSCEEEEEESCT--TCHHHHHHHHHHHHH
T ss_pred EEEEeCC-ceeeee-cCccCHHHHHHHHHhhcccCceecCCHHHHHHHHhcCCcEEEEEECCC--ccchHHHHHHHHHHh
Confidence 9999864 356778 9999999999999999999998884 4667777666655555566543 456678899999999
Q ss_pred cCceEEEEEecCCcccccchhhhhCCCCCCCcEEEEEe------CCCCceecCC-CCCCHHHHHHHHHHHhcCCcCcccc
Q 013976 197 KGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTG------NDDAKKHILD-GELTLDKIKTFGEDFLEGKLKPFFK 269 (432)
Q Consensus 197 ~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~------~~~~~~y~~~-~~~~~~~i~~fi~~~~~g~l~~~~~ 269 (432)
++.+.|+.+. ...+++.++++.. | ++++. ........|. |..+.+.|.+||....-
T Consensus 155 ~~~~~F~~~~------~~~~~~~~~v~~~--~-i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~-------- 217 (481)
T 3f8u_A 155 RDNYRFAHTN------VESLVNEYDDNGE--G-IILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIF-------- 217 (481)
T ss_dssp TTTSCEEEEC------CHHHHHHHCSSSE--E-EEEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTT--------
T ss_pred ccCceEEEEC------CHHHHHHhCCCCC--c-EEEEecccccCccCCcccccCCCCCCHHHHHHHHHHhCC--------
Confidence 9999999875 3467899999765 5 55554 2234556777 78999999999998653
Q ss_pred CCCCCCCCCCceEEEecccchhhhhcCCCcEEEEEeCCC-Chh---hhhhHHHHHHHHHHhcCC-CCEEEEEEeCCCccc
Q 013976 270 SDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPW-CGH---CQAFEPTYNKLAKHLRGV-DSIVIAKMDGTTNEH 344 (432)
Q Consensus 270 se~~p~~~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~-c~~---c~~~~~~~~~la~~~~~~-~~~~~~~id~~~~~~ 344 (432)
+.+..++..++..+. +.+.++.|+... ... +..+...+.++|+.+++. ..+.|+.+|+.....
T Consensus 218 ---------p~v~e~t~~n~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~i~F~~~D~~~~~~ 285 (481)
T 3f8u_A 218 ---------GICPHMTEDNKDLIQ---GKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSH 285 (481)
T ss_dssp ---------TTSCEECTTTHHHHT---TSSEEEEEECCCTTTCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTTHH
T ss_pred ---------CCccccChhHHHHhc---CCCceEEEEecccccchhhHHHHHHHHHHHHHHhcCCCceEEEEEEcHHHHHH
Confidence 236678888988865 456666666533 222 233577899999999873 349999999888765
Q ss_pred --ccCCCC----CCceEEEEeCCCcccCceeccCCCCHH--HHHHHHHhcCCCCCcc
Q 013976 345 --HRAKSD----GFPTILFFPAGNKSFDPINVDVDRTVV--ALYKFLKKNASIPFKI 393 (432)
Q Consensus 345 --~~~~i~----~~P~i~~~~~g~~~~~~~~y~g~~~~~--~l~~fi~~~~~~~~~~ 393 (432)
..++++ ..|.++++..+.. ...+.+..+.+ .|.+|+.+........
T Consensus 286 ~l~~~gl~~~~~~~P~~~i~~~~~~---ky~~~~~~t~e~~~l~~f~~~~~~g~~~~ 339 (481)
T 3f8u_A 286 ELSDFGLESTAGEIPVVAIRTAKGE---KFVMQEEFSRDGKALERFLQDYFDGNLKR 339 (481)
T ss_dssp HHGGGTCCCCTTCSCEEEEECSSSC---EEECCSCCCTTSHHHHHHHHHHHHTCCCC
T ss_pred HHHHcCCCcccCCCcEEEEEcCCCc---ccCCCcccCccHHHHHHHHHHHhcCCccc
Confidence 567776 6899999964332 22566778888 9999999988765543
No 22
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.82 E-value=8.8e-20 Score=146.17 Aligned_cols=109 Identities=27% Similarity=0.480 Sum_probs=98.1
Q ss_pred CCceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcC---CCCEEEEEEeCCCccc--ccCCCCCC
Q 013976 278 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRG---VDSIVIAKMDGTTNEH--HRAKSDGF 352 (432)
Q Consensus 278 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~---~~~~~~~~id~~~~~~--~~~~i~~~ 352 (432)
.+.|..|++++|++.+.+.+++++|.||++||++|+.+.|.|.+++..+.. ..++.|+.+|++.+.. .+++|.++
T Consensus 14 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~ 93 (127)
T 3h79_A 14 PSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSGF 93 (127)
T ss_dssp CCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCSS
T ss_pred CCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCccC
Confidence 567999999999998877789999999999999999999999999998752 2479999999999866 68999999
Q ss_pred ceEEEEeCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 353 PTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 353 P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
|++++|++|... .+..|.|.++.+.|.+||.+++
T Consensus 94 Pt~~~~~~g~~~-~~~~~~G~~~~~~l~~~i~~~s 127 (127)
T 3h79_A 94 PTMRYYTRIDKQ-EPFEYSGQRYLSLVDSFVFQNT 127 (127)
T ss_dssp SEEEEECSSCSS-SCEECCSCCCHHHHHHHHHHHC
T ss_pred CEEEEEeCCCCC-CceEecCCccHHHHHHHHHhcC
Confidence 999999999876 5679999999999999999864
No 23
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=99.82 E-value=1.1e-19 Score=148.40 Aligned_cols=133 Identities=36% Similarity=0.621 Sum_probs=109.7
Q ss_pred HHHhcCCCceeecCCCchhhhccCCCcceEEEEEeC--cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhC
Q 013976 144 FVFSNKLPLVTIFTRENAPSVFESPIKNQLLLFAVS--NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFG 221 (432)
Q Consensus 144 fi~~~~~p~v~~l~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~ 221 (432)
-+..+++|+|.++|.++...++..+.+..+++|... ...+.+++.++++|++|+|++.|+++|..... +..+++.||
T Consensus 7 ~~~~~~~PLV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~-~~~~l~~fG 85 (147)
T 3bj5_A 7 HMKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTD-NQRILEFFG 85 (147)
T ss_dssp --------CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGG-GHHHHHHTT
T ss_pred chhhccCCeeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHh-HHHHHHHcC
Confidence 356789999999999999999998887777767653 55788999999999999999999999985443 556889999
Q ss_pred CCCCCCcEEEEEeC-CCCceecCC-CCCCHHHHHHHHHHHhcCCcCccccCCCCCCCC
Q 013976 222 ITGEAPKVLAYTGN-DDAKKHILD-GELTLDKIKTFGEDFLEGKLKPFFKSDPIPETN 277 (432)
Q Consensus 222 i~~~~~P~i~i~~~-~~~~~y~~~-~~~~~~~i~~fi~~~~~g~l~~~~~se~~p~~~ 277 (432)
++...+|+++|.+. ..+.+|.+. ++++.++|.+||++|++|+++|+++|||+|++|
T Consensus 86 l~~~~~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~GkL~p~~KSEpiPe~w 143 (147)
T 3bj5_A 86 LKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDW 143 (147)
T ss_dssp CCGGGCSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHHTTCSCEEECCSCCCGGG
T ss_pred CCcccCCEEEEEecccccccCCCCcccCCHHHHHHHHHHHHcCCccccccCCCCCCCc
Confidence 99877899999986 556788875 789999999999999999999999999999884
No 24
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.79 E-value=2e-18 Score=137.00 Aligned_cols=114 Identities=46% Similarity=0.853 Sum_probs=99.4
Q ss_pred CCCCCceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcC---CCCEEEEEEeCCCcccccCCCCC
Q 013976 275 ETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRG---VDSIVIAKMDGTTNEHHRAKSDG 351 (432)
Q Consensus 275 ~~~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~---~~~~~~~~id~~~~~~~~~~i~~ 351 (432)
+...+.|..|++++|++.+...+++++|+||++||++|+.+.|.|.+++..+.+ ..++.|+.+|++.++... +|.+
T Consensus 3 ~~~~~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~-~v~~ 81 (121)
T 2djj_A 3 LGSEGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATANDVPD-EIQG 81 (121)
T ss_dssp CCCSCSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSCCSS-CCSS
T ss_pred ccCCCCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccccccc-ccCc
Confidence 345677999999999998767789999999999999999999999999999986 347999999999988766 9999
Q ss_pred CceEEEEeCCCcccCceeccCCCCHHHHHHHHHhcCCCC
Q 013976 352 FPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIP 390 (432)
Q Consensus 352 ~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~ 390 (432)
+|++++|.+|..+ ....|.|..+.+.|.+||++++...
T Consensus 82 ~Pt~~~~~~~~~~-~~~~~~G~~~~~~l~~~i~~~~~~~ 119 (121)
T 2djj_A 82 FPTIKLYPAGAKG-QPVTYSGSRTVEDLIKFIAENGKYK 119 (121)
T ss_dssp SSEEEEECSSCTT-SCCCCCCCSCHHHHHHHHHHTSSSC
T ss_pred CCeEEEEeCcCCC-CceEecCCCCHHHHHHHHHhccCcC
Confidence 9999999888653 2448999999999999999988654
No 25
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.78 E-value=1.5e-17 Score=152.86 Aligned_cols=215 Identities=16% Similarity=0.196 Sum_probs=167.9
Q ss_pred CCceeecCCCchhhhc-cCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCC
Q 013976 150 LPLVTIFTRENAPSVF-ESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAP 227 (432)
Q Consensus 150 ~p~v~~l~~~~~~~~~-~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~ 227 (432)
.+.+.+++.++|...+ ..+.++++.||++| ++|+.+.+.|.++|..+.+.+.|+.+||+... .+.+|+.|||.++
T Consensus 16 ~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~-~~~l~~~~~I~~~-- 92 (298)
T 3ed3_A 16 DPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNK-NKALCAKYDVNGF-- 92 (298)
T ss_dssp CTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTT-THHHHHHTTCCBS--
T ss_pred CCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCcc-CHHHHHhCCCCcc--
Confidence 4568899999999887 45667889999999 99999999999999999999999999998544 6789999999998
Q ss_pred cEEEEEeCCCC----------------ceecCCCCCCHHHHHHHHHHHhcCCcCccccCCCCCCCCCCceEEEe-cccch
Q 013976 228 KVLAYTGNDDA----------------KKHILDGELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVV-GNNFD 290 (432)
Q Consensus 228 P~i~i~~~~~~----------------~~y~~~~~~~~~~i~~fi~~~~~g~l~~~~~se~~p~~~~~~v~~l~-~~~~~ 290 (432)
|+++++..+.. ....|.|.++.+.|.+|+.+.+. ..+..+. .++++
T Consensus 93 Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~-----------------~~v~~i~~~~~l~ 155 (298)
T 3ed3_A 93 PTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIR-----------------SYVKKFVRIDTLG 155 (298)
T ss_dssp SEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCC-----------------CCEEECSCGGGHH
T ss_pred ceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcc-----------------cccEEcCCHHHHH
Confidence 99999987641 35678999999999999998754 2355664 46788
Q ss_pred hhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc----ccCC-----C------------
Q 013976 291 EIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH----HRAK-----S------------ 349 (432)
Q Consensus 291 ~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~----~~~~-----i------------ 349 (432)
+++...+.+.+++|. .. ....+.|..+|..+.+ .+.|+.++...... .++. |
T Consensus 156 ~~l~~~~~~~vi~fs-~~----~~~~~~f~~~A~~~~~--~~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~ 228 (298)
T 3ed3_A 156 SLLRKSPKLSVVLFS-KQ----DKISPVYKSIALDWLG--KFDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQR 228 (298)
T ss_dssp HHHTSCSSEEEEEEE-SS----SSCCHHHHHHHHHTBT--TEEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHHHHHHT
T ss_pred HHHhcCCceEEEEEc-CC----CcchHHHHHHHHHhhc--CcEEEEEcchHhhhhhhhhhhcccCcchhhhhhccccccc
Confidence 877544566677663 22 2346789999999988 79999998443221 1222 2
Q ss_pred -CCCceEEEEeCCCcccCceeccC-CCCHHHHHHHHHhcCCCCCcc
Q 013976 350 -DGFPTILFFPAGNKSFDPINVDV-DRTVVALYKFLKKNASIPFKI 393 (432)
Q Consensus 350 -~~~P~i~~~~~g~~~~~~~~y~g-~~~~~~l~~fi~~~~~~~~~~ 393 (432)
...|++++|+.... +++.|.| ..+.+.|.+||.++....+..
T Consensus 229 ~~~~P~lv~~~~~~~--~~~~y~g~~~~~~~i~~fi~~~~~~~p~~ 272 (298)
T 3ed3_A 229 QSDKSKLVVFDADKD--KFWEYEGNSINKNDISKFLRDTFSITPNE 272 (298)
T ss_dssp TCSSCEEEEEETTTT--EEEECCCSSCCHHHHHHHHHHHHTCCCSS
T ss_pred ccCCCeEEEEcCCCC--ceEEeccccCCHHHHHHHHHhhcCCCCCc
Confidence 67999999987655 6779996 789999999999776654333
No 26
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.77 E-value=9.6e-19 Score=134.46 Aligned_cols=94 Identities=26% Similarity=0.529 Sum_probs=83.4
Q ss_pred cccchhhhhcC-CCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEEEEeCCC
Q 013976 286 GNNFDEIVLDE-SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFFPAGN 362 (432)
Q Consensus 286 ~~~~~~~~~~~-~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~~~~~g~ 362 (432)
.++|++.+.+. +++++|.|||+||++|+.+.|.|.+++..+.+ +.|+.+|++++.. .+++|.++||+++|++|+
T Consensus 8 ~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~---~~~~~vd~d~~~~l~~~~~V~~~PT~~~~~~G~ 84 (105)
T 3zzx_A 8 QEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD---VVFLKVDVDECEDIAQDNQIACMPTFLFMKNGQ 84 (105)
T ss_dssp HHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT---EEEEEEETTTCHHHHHHTTCCBSSEEEEEETTE
T ss_pred HHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC---eEEEEEecccCHHHHHHcCCCeecEEEEEECCE
Confidence 47898888654 57999999999999999999999999998865 8999999999877 689999999999999998
Q ss_pred cccCceeccCCCCHHHHHHHHHhc
Q 013976 363 KSFDPINVDVDRTVVALYKFLKKN 386 (432)
Q Consensus 363 ~~~~~~~y~g~~~~~~l~~fi~~~ 386 (432)
.+. ++.| .+.+.|.+||++|
T Consensus 85 ~v~---~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 85 KLD---SLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp EEE---EEES-CCHHHHHHHHHHH
T ss_pred EEE---EEeC-cCHHHHHHHHHhc
Confidence 775 6777 6899999999986
No 27
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.77 E-value=6.5e-18 Score=136.37 Aligned_cols=112 Identities=49% Similarity=0.940 Sum_probs=99.2
Q ss_pred CCceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceE
Q 013976 278 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTI 355 (432)
Q Consensus 278 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i 355 (432)
++.|..|++.+|+..+...+++++|+||++||++|+.+.|.|.+++..+....++.|+.+|++.+.. .+++|.++|++
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 85 (133)
T 2dj3_A 6 SGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPTI 85 (133)
T ss_dssp SCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSSEE
T ss_pred CCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCCEE
Confidence 5679999999999988666899999999999999999999999999999864479999999998877 57999999999
Q ss_pred EEEeCCCcccCceecc-CCCCHHHHHHHHHhcCCCC
Q 013976 356 LFFPAGNKSFDPINVD-VDRTVVALYKFLKKNASIP 390 (432)
Q Consensus 356 ~~~~~g~~~~~~~~y~-g~~~~~~l~~fi~~~~~~~ 390 (432)
++|.+|..+ ..+.|. |..+.+.|.+||++++...
T Consensus 86 ~~~~~g~~~-~~~~~~gg~~~~~~l~~~l~~~~~~~ 120 (133)
T 2dj3_A 86 YFAPSGDKK-NPIKFEGGNRDLEHLSKFIDEHATKR 120 (133)
T ss_dssp EEECTTCTT-SCEECCSSCCSTTHHHHHHHHHSSSC
T ss_pred EEEeCCCcc-cceEecCCCcCHHHHHHHHHHhcccc
Confidence 999988776 566788 4589999999999998654
No 28
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.75 E-value=8.9e-18 Score=139.88 Aligned_cols=120 Identities=18% Similarity=0.255 Sum_probs=99.2
Q ss_pred CCceEEEecccchhhhhcC-CCcEEEEEeC-------CCChhhhhhHHHHHHHHHHhcCC---CCEEEEEEeCCCccc--
Q 013976 278 DGDVKIVVGNNFDEIVLDE-SKDVLLEIYA-------PWCGHCQAFEPTYNKLAKHLRGV---DSIVIAKMDGTTNEH-- 344 (432)
Q Consensus 278 ~~~v~~l~~~~~~~~~~~~-~~~~lv~f~~-------~~c~~c~~~~~~~~~la~~~~~~---~~~~~~~id~~~~~~-- 344 (432)
.+.|..|+..+|++.+... +.++||+||| +||++|+.+.|+|+++|..+... .++.|+++|++++..
T Consensus 17 ~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la 96 (178)
T 3ga4_A 17 DTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLV 96 (178)
T ss_dssp TTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHH
T ss_pred cCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHH
Confidence 3468899999999987543 4679999999 49999999999999999999711 279999999999887
Q ss_pred ccCCCCCCceEEEEeCCCccc---------Cceec---cC-CCCHHHHHHHHHhcCCCCCcccCCC
Q 013976 345 HRAKSDGFPTILFFPAGNKSF---------DPINV---DV-DRTVVALYKFLKKNASIPFKIQKPT 397 (432)
Q Consensus 345 ~~~~i~~~P~i~~~~~g~~~~---------~~~~y---~g-~~~~~~l~~fi~~~~~~~~~~~~~~ 397 (432)
.+++|.++||+++|++|.... .+..| .| .++++.|.+||.++++..+.+..|+
T Consensus 97 ~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i~I~rp~ 162 (178)
T 3ga4_A 97 KDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNISITVPQAF 162 (178)
T ss_dssp HHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCCCCCCCSC
T ss_pred HHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCCccccCCC
Confidence 799999999999999997542 23455 35 8999999999999998777665553
No 29
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.75 E-value=8.6e-17 Score=143.72 Aligned_cols=202 Identities=16% Similarity=0.234 Sum_probs=166.9
Q ss_pred CCceeeCCHHHHHHHhhcCCeEEEEEecCCCcc---hHHHHHHHh-ccCC---CceEEEe---CcHHHHhHcCCCCCCCC
Q 013976 46 PGIYNITTLDEAERVLTSETKVVLGYLNSLVGS---ESEVLADAS-RLED---DVNFYQT---TNPDVAKIFHLDSKVNR 115 (432)
Q Consensus 46 ~~~~~i~~~~~l~~~~~~~~~~vv~f~~~~~~~---~~~~f~~~a-~~~~---~~~F~~~---~~~~~~~~~~~~~~~~~ 115 (432)
..+..+ +.+.++.++...+.++|.|+.+.|.+ ....|.+++ .+.+ .+.|+.+ .+.+++++|++.. .
T Consensus 15 ~~v~~l-~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~---~ 90 (241)
T 3idv_A 15 NGVLVL-NDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSG---Y 90 (241)
T ss_dssp TTEEEE-CTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCS---S
T ss_pred CCcEEe-cccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCc---C
Confidence 346666 45889999988899999999998865 445666666 3333 3778774 3678999999986 7
Q ss_pred CeEEEEecCCCceecccCCCCCHHHHHHHHHhcCCC-------ceeecCCCchhhhccCCCcceEEEEEeC-cchhhhHH
Q 013976 116 PALVMVKKETEKISYFADGKFDKSTIADFVFSNKLP-------LVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLP 187 (432)
Q Consensus 116 p~i~l~~~~~~~~~~y~~g~~~~~~l~~fi~~~~~p-------~v~~l~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~ 187 (432)
|++++|+. +....| .|..+.+.|..||.....+ .+..++.+++......+..+++.||++| ++|+.+.+
T Consensus 91 Pt~~~~~~--g~~~~~-~g~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p 167 (241)
T 3idv_A 91 PTIKILKK--GQAVDY-EGSRTQEEIVAKVREVSQPDWTPPPEVTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAP 167 (241)
T ss_dssp SEEEEEET--TEEEEC-CSCSCHHHHHHHHHHHHSTTCCCCCCSSEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHH
T ss_pred CEEEEEcC--CCcccc-cCcccHHHHHHHHhhccCcccccccccceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHH
Confidence 99999985 345568 8999999999999876554 5778899999998888888889999999 99999999
Q ss_pred HHHHHHHhccCc---eEEEEEecCCcccccchhhhhCCCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 188 VFEEAAKSFKGK---LIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 188 ~~~~~a~~~~~~---i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
.+.++|.++.++ +.|+.+|++. ++.+++.|||.+. |+++++.++ +...|.|.++.+.|.+|+.+...
T Consensus 168 ~~~~~a~~~~~~~~~v~~~~vd~~~---~~~l~~~~~v~~~--Pt~~~~~~g--~~~~~~g~~~~~~l~~~l~~~~~ 237 (241)
T 3idv_A 168 EYEKAAKELSKRSPPIPLAKVDATA---ETDLAKRFDVSGY--PTLKIFRKG--RPYDYNGPREKYGIVDYMIEQSG 237 (241)
T ss_dssp HHHHHHHHHHTSSSCCCEEEEETTT---CHHHHHHTTCCSS--SEEEEEETT--EEEECCSCCSHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhccCCcEEEEEEECCC---CHHHHHHcCCccc--CEEEEEECC--eEEEecCCCCHHHHHHHHHhhhC
Confidence 999999999765 9999999998 5689999999988 999998754 45568999999999999999764
No 30
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.75 E-value=2.6e-16 Score=156.10 Aligned_cols=299 Identities=14% Similarity=0.207 Sum_probs=224.6
Q ss_pred CceeeCCHHHHHHHhhcCCeEEEEEecCCCcc---hHHHHHHHh-ccCC-CceEEEeC---cHHHHhHcCCCCCCCCCeE
Q 013976 47 GIYNITTLDEAERVLTSETKVVLGYLNSLVGS---ESEVLADAS-RLED-DVNFYQTT---NPDVAKIFHLDSKVNRPAL 118 (432)
Q Consensus 47 ~~~~i~~~~~l~~~~~~~~~~vv~f~~~~~~~---~~~~f~~~a-~~~~-~~~F~~~~---~~~~~~~~~~~~~~~~p~i 118 (432)
.+..+ +.+++++++..++.++|.|+.+.|++ +...|.++| .+.+ .+.|+.++ +.++|+++|+.. +|++
T Consensus 15 ~v~~l-~~~~f~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~l~~~~~v~~---~Pt~ 90 (504)
T 2b5e_A 15 AVVKL-ATDSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPG---FPSL 90 (504)
T ss_dssp SCEEC-CTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTCCS---SSEE
T ss_pred CcEEC-CHHHHHHHHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHHHHHhcCCCc---CCEE
Confidence 46677 46889999988999999999999865 556788887 5555 48888864 678999999986 7999
Q ss_pred EEEecCCCc-eecccCCCCCHHHHHHHHHhcCCCceeecCCCchhhhccCCC--cceEEEEEeCcchhhhHHHHHHHHHh
Q 013976 119 VMVKKETEK-ISYFADGKFDKSTIADFVFSNKLPLVTIFTRENAPSVFESPI--KNQLLLFAVSNDSEKLLPVFEEAAKS 195 (432)
Q Consensus 119 ~l~~~~~~~-~~~y~~g~~~~~~l~~fi~~~~~p~v~~l~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~a~~ 195 (432)
++|+.+... ...| .|..+.+.|.+||.....|.+.+++. +..++.... ..++.||... .......|.++|..
T Consensus 91 ~~~~~g~~~~~~~~-~G~~~~~~l~~~l~~~~~~~v~~i~~--~~~~~~~~~~~~~~v~~f~~~--~~~~~~~f~~~A~~ 165 (504)
T 2b5e_A 91 KIFKNSDVNNSIDY-EGPRTAEAIVQFMIKQSQPAVAVVAD--LPAYLANETFVTPVIVQSGKI--DADFNATFYSMANK 165 (504)
T ss_dssp EEEETTCTTCEEEC-CSCCSHHHHHHHHHHHTSCSEEECSC--HHHHHHHSCCSSCEEEEEESC--CHHHHHHHHHHHHH
T ss_pred EEEeCCccccceee-cCCCCHHHHHHHHHHhcCCcceeHHH--HHHHHhcCCCceEEEEEeCCC--CchHHHHHHHHHHH
Confidence 999974321 7788 99999999999999999999999988 777766555 4566666553 23355689999999
Q ss_pred ccCceEEEEEecCCcccccchhhhhCCCCCCCcEEEEEeCCCCceecCCCC-C---CHHHHHHHHHHHhcCCcCccccCC
Q 013976 196 FKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGE-L---TLDKIKTFGEDFLEGKLKPFFKSD 271 (432)
Q Consensus 196 ~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~-~---~~~~i~~fi~~~~~g~l~~~~~se 271 (432)
+++.+.|+.++ + +++.+|++ ++++.... ....|.|. + +.+.|.+||....-.
T Consensus 166 ~~~~~~F~~~~--~------~~~~~~~~------i~l~~~~~-~~~~~~g~~~~~~~~~~l~~fi~~~~~p--------- 221 (504)
T 2b5e_A 166 HFNDYDFVSAE--N------ADDDFKLS------IYLPSAMD-EPVVYNGKKADIADADVFEKWLQVEALP--------- 221 (504)
T ss_dssp TTTTCEEEEEE--C------TTSCCEEE------EEETTEEE-EEEECCSCHHHHTSHHHHHHHHHHHSSC---------
T ss_pred hhcCcEEEEEH--H------HHHhcCCe------EEecCCCC-cccccCCcccccCCHHHHHHHHHhcccC---------
Confidence 99999999887 1 34556653 44443322 45567887 6 999999999886432
Q ss_pred CCCCCCCCceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCC
Q 013976 272 PIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKS 349 (432)
Q Consensus 272 ~~p~~~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i 349 (432)
.+..++..++..+. ....+++++|+...... ..+...|.++|+.+++ ++.|+.+|+..... ..+++
T Consensus 222 --------~v~~~t~~~~~~~~-~~~~~~~~l~~~~~~~~-~~~~~~l~~~a~~~~~--~i~F~~id~~~~~~~~~~~gl 289 (504)
T 2b5e_A 222 --------YFGEIDGSVFAQYV-ESGLPLGYLFYNDEEEL-EEYKPLFTELAKKNRG--LMNFVSIDARKFGRHAGNLNM 289 (504)
T ss_dssp --------SSCBCCHHHHHHHH-HTTSCEEEEEESSHHHH-HHHHHHHHHHHHHTTT--TCEEEEEEHHHHTTHHHHTTC
T ss_pred --------CcccCCHhHHHHHh-cCCCcEEEEEecCcccH-HHHHHHHHHHHHhcCC--eeEEEEEehhhhHHHHHHcCC
Confidence 24557778888865 56677888787654333 7788999999999997 79999999887655 46676
Q ss_pred -CCCceEEEEeCCCcccCceecc--CC-----------CCHHHHHHHHHhcCCCCCc
Q 013976 350 -DGFPTILFFPAGNKSFDPINVD--VD-----------RTVVALYKFLKKNASIPFK 392 (432)
Q Consensus 350 -~~~P~i~~~~~g~~~~~~~~y~--g~-----------~~~~~l~~fi~~~~~~~~~ 392 (432)
..+|+++++...... + ..+. +. .+.+.|.+|+.+....+..
T Consensus 290 ~~~~P~v~i~~~~~~~-k-y~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~~~~g~~~ 344 (504)
T 2b5e_A 290 KEQFPLFAIHDMTEDL-K-YGLPQLSEEAFDELSDKIVLESKAIESLVKDFLKGDAS 344 (504)
T ss_dssp CSCSSEEEEEETTTTE-E-EECCCCCHHHHHTCCSCCCCCHHHHHHHHHHHHHTCCC
T ss_pred cccCCEEEEEeCCcCc-c-cCCCCCccchhhccccccccCHHHHHHHHHHHHcCCCC
Confidence 469999999874332 1 1233 33 7899999999998876553
No 31
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.74 E-value=3e-18 Score=135.65 Aligned_cols=104 Identities=11% Similarity=0.070 Sum_probs=94.7
Q ss_pred CceEEEecccchhhhhcCCCcEEEEEeCCCC--hhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCce
Q 013976 279 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWC--GHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPT 354 (432)
Q Consensus 279 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c--~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~ 354 (432)
.....++..+|++.+...++++||+|||+|| ++|+.+.|++.+|+..|.+ ++.|+++|++++.. .+|+|.++||
T Consensus 15 ~g~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~--~v~~~KVdvDe~~~la~~ygV~siPT 92 (137)
T 2qsi_A 15 NAPTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPG--RLVAAEVAAEAERGLMARFGVAVCPS 92 (137)
T ss_dssp --CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTT--TEEEEEECGGGHHHHHHHHTCCSSSE
T ss_pred cCCcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccC--CcEEEEEECCCCHHHHHHcCCccCCE
Confidence 4456899999999986666699999999999 9999999999999999987 79999999999887 6899999999
Q ss_pred EEEEeCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 355 ILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 355 i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
+++|++|+.+. +..|..+.+.|.++|++++
T Consensus 93 lilFkdG~~v~---~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 93 LAVVQPERTLG---VIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp EEEEECCEEEE---EEESCCCHHHHHHHHHHHH
T ss_pred EEEEECCEEEE---EEeCCCCHHHHHHHHHHHh
Confidence 99999999886 8899999999999999888
No 32
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.73 E-value=2.7e-17 Score=127.52 Aligned_cols=104 Identities=25% Similarity=0.506 Sum_probs=93.6
Q ss_pred CceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEE
Q 013976 279 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTIL 356 (432)
Q Consensus 279 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~ 356 (432)
+.|..++.++|++.+...+++++|+||++||++|+.+.|.|.+++..+.+ ++.++.+|++.+.. .++++.++|+++
T Consensus 2 ~~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 79 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNPGTAPKYGIRGIPTLL 79 (108)
T ss_dssp TTEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCTTHHHHTTCCSSSEEE
T ss_pred CcceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC--CcEEEEEECCCCHHHHHHcCCcccCEEE
Confidence 45888999999987777789999999999999999999999999999986 69999999998876 689999999999
Q ss_pred EEeCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 357 FFPAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 357 ~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
+|++|+.+. .+.|..+.+.|.+||++.+
T Consensus 80 ~~~~G~~~~---~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 80 LFKNGEVAA---TKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp EEETTEEEE---EEESCCCHHHHHHHHHHHH
T ss_pred EEeCCEEEE---EEecCCCHHHHHHHHHHhh
Confidence 998887654 7889999999999998865
No 33
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.72 E-value=2.5e-17 Score=134.21 Aligned_cols=112 Identities=32% Similarity=0.645 Sum_probs=98.1
Q ss_pred CCCceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCC-CCEEEEEEeCCCccc--ccCCCCCCc
Q 013976 277 NDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGV-DSIVIAKMDGTTNEH--HRAKSDGFP 353 (432)
Q Consensus 277 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~-~~~~~~~id~~~~~~--~~~~i~~~P 353 (432)
..+.|..|+..+|++.+ ..++++||+||++||++|+.+.|.|.+++..+.+. ..+.|+.+|++.+.. .+++|.++|
T Consensus 15 ~~~~v~~l~~~~~~~~~-~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P 93 (140)
T 2dj1_A 15 EENGVWVLNDGNFDNFV-ADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYP 93 (140)
T ss_dssp EETTEEECCTTTHHHHH-TTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSS
T ss_pred CCCCCEEcChHhHHHHH-hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccC
Confidence 35679999999999976 55789999999999999999999999999999863 359999999998865 689999999
Q ss_pred eEEEEeCCCcccCceeccCCCCHHHHHHHHHhcCCCCCcc
Q 013976 354 TILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPFKI 393 (432)
Q Consensus 354 ~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~~~~ 393 (432)
++++|++|+ +. .|.|..+.+.|.+||++++......
T Consensus 94 t~~~~~~G~-~~---~~~g~~~~~~l~~~l~~~~~~~~~~ 129 (140)
T 2dj1_A 94 TIKILKKGQ-AV---DYDGSRTQEEIVAKVREVSQPDWTP 129 (140)
T ss_dssp EEEEEETTE-EE---ECCSCCCHHHHHHHHHHHHSSSCCC
T ss_pred eEEEEECCc-EE---EcCCCCCHHHHHHHHHHhcCCCCCC
Confidence 999998886 32 8999999999999999998766544
No 34
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.72 E-value=1.7e-17 Score=129.28 Aligned_cols=104 Identities=20% Similarity=0.306 Sum_probs=94.8
Q ss_pred CceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEE
Q 013976 279 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTIL 356 (432)
Q Consensus 279 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~ 356 (432)
..+..++.++|++.+.+.+++++|.||++||++|+.+.|.|.+++..+.+ ++.|+.+|++.+.. .+++|.++|+++
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 81 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE--SFGFYYVDVEEEKTLFQRFSLKGVPQIL 81 (111)
T ss_dssp CCSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTCHHHHHHTTCCSSCEEE
T ss_pred CcceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC--ceEEEEEECCcChhHHHhcCCCcCCEEE
Confidence 34888999999998877789999999999999999999999999999987 69999999999886 689999999999
Q ss_pred EEeCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 357 FFPAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 357 ~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
+|++|+.+. .+.|..+.+.|.+||++++
T Consensus 82 ~~~~g~~~~---~~~g~~~~~~l~~~l~~~l 109 (111)
T 3gnj_A 82 YFKDGEYKG---KMAGDVEDDEVEQMIADVL 109 (111)
T ss_dssp EEETTEEEE---EEESSCCHHHHHHHHHHHH
T ss_pred EEECCEEEE---EEeccCCHHHHHHHHHHHh
Confidence 999887654 7899999999999999875
No 35
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.72 E-value=2.1e-17 Score=132.65 Aligned_cols=104 Identities=11% Similarity=0.108 Sum_probs=88.4
Q ss_pred eEEEec-ccchhhhhc-CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEE
Q 013976 281 VKIVVG-NNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTIL 356 (432)
Q Consensus 281 v~~l~~-~~~~~~~~~-~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~ 356 (432)
+..|.. .+|++.+.. .++++||.|||+||++|+.+.|+|+++|..+.+ .+.|+++|+++++. ..|+|.+.||++
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~--~v~f~kVDVDe~~e~a~~y~V~siPT~~ 100 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKN--FCVIYLVDITEVPDFNTMYELYDPVSVM 100 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT--TEEEEEEETTTCCTTTTTTTCCSSEEEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccC--CcEEEEEECCCCHHHHHHcCCCCCCEEE
Confidence 444554 789988864 678999999999999999999999999999987 69999999999988 789999999999
Q ss_pred EEeCCCcccCce-------eccCCCC-HHHHHHHHHhcC
Q 013976 357 FFPAGNKSFDPI-------NVDVDRT-VVALYKFLKKNA 387 (432)
Q Consensus 357 ~~~~g~~~~~~~-------~y~g~~~-~~~l~~fi~~~~ 387 (432)
+|++|+.+ ..- ...|... .+.|.++|+.+.
T Consensus 101 fFk~G~~v-~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~ 138 (160)
T 2av4_A 101 FFYRNKHM-MIDLGTGNNNKINWPMNNKQEFIDIVETIF 138 (160)
T ss_dssp EEETTEEE-EEECSSSCCSCBCSCCCCHHHHHHHHHHHH
T ss_pred EEECCEEE-EEecCCCCcCeEEeecCCHHHHHHHHHHHH
Confidence 99999764 001 4667665 899999998876
No 36
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.72 E-value=4.2e-17 Score=130.52 Aligned_cols=105 Identities=24% Similarity=0.468 Sum_probs=94.3
Q ss_pred CCceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceE
Q 013976 278 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTI 355 (432)
Q Consensus 278 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i 355 (432)
.+.|..++.++|++.+.+.+++++|+||++||++|+.+.|.|.++++.+.+ ++.|+.+|++.+.. ..++|.++|++
T Consensus 21 ~~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 98 (128)
T 2o8v_B 21 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQG--KLTVAKLNIDQNPGTAPKYGIRGIPTL 98 (128)
T ss_dssp CCCSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT--TEEEEEEETTTCCTTSGGGTCCSSSEE
T ss_pred ccccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CeEEEEEECCCCHHHHHHcCCCccCEE
Confidence 456889999999987777789999999999999999999999999999986 69999999998876 68999999999
Q ss_pred EEEeCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 356 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 356 ~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
++|++|+.+. .+.|..+.+.|.+||++.+
T Consensus 99 ~~~~~G~~~~---~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 99 LLFKNGEVAA---TKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp EEEETTEEEE---EEESCCCHHHHHHHHHHHH
T ss_pred EEEeCCEEEE---EEcCCCCHHHHHHHHHHhh
Confidence 9998887654 7889999999999998865
No 37
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.71 E-value=3.9e-17 Score=127.82 Aligned_cols=104 Identities=16% Similarity=0.229 Sum_probs=89.4
Q ss_pred CceEEEecccchhhhhcCCC--cEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcccccCCCCCCceEE
Q 013976 279 GDVKIVVGNNFDEIVLDESK--DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKSDGFPTIL 356 (432)
Q Consensus 279 ~~v~~l~~~~~~~~~~~~~~--~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~~~~~i~~~P~i~ 356 (432)
+.+..++.++|.+.+.+.++ +++|.||++||++|+.+.|.+++||..+.+ +.|+++|++++ ..+++|.++||++
T Consensus 3 G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~---v~f~kvd~d~~-~~~~~v~~~PT~~ 78 (118)
T 3evi_A 3 GELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPE---TKFVKAIVNSC-IQHYHDNCLPTIF 78 (118)
T ss_dssp CSCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTT---SEEEEEEGGGT-STTCCGGGCSEEE
T ss_pred cceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCC---CEEEEEEhHHh-HHHCCCCCCCEEE
Confidence 45788899999998866554 899999999999999999999999999854 99999999886 5789999999999
Q ss_pred EEeCCCcccCceeccC-------CCCHHHHHHHHHhcCCC
Q 013976 357 FFPAGNKSFDPINVDV-------DRTVVALYKFLKKNASI 389 (432)
Q Consensus 357 ~~~~g~~~~~~~~y~g-------~~~~~~l~~fi~~~~~~ 389 (432)
+|++|+.+. ++.| ..+.+.|..+|.++.-.
T Consensus 79 ~fk~G~~v~---~~~G~~~~gg~~~~~~~le~~L~~~g~i 115 (118)
T 3evi_A 79 VYKNGQIEA---KFIGIIECGGINLKLEELEWKLAEVGAI 115 (118)
T ss_dssp EEETTEEEE---EEESTTTTTCSSCCHHHHHHHHHTTTSC
T ss_pred EEECCEEEE---EEeChhhhCCCCCCHHHHHHHHHHcCCc
Confidence 999998876 4444 35889999999887543
No 38
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.71 E-value=7.6e-17 Score=124.66 Aligned_cols=103 Identities=22% Similarity=0.420 Sum_probs=93.0
Q ss_pred CceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEE
Q 013976 279 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTIL 356 (432)
Q Consensus 279 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~ 356 (432)
+.|..+++++|++.+...+++++|.||++||++|+.+.|.|.+++..+.+ ++.|+.+|++.+.. ..+++.++|+++
T Consensus 2 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 79 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG--KVTVAKVNIDDNPETPNAYQVRSIPTLM 79 (107)
T ss_dssp CCEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT--SEEEEEEETTTCCHHHHHTTCCSSSEEE
T ss_pred CceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC--cEEEEEEECCCCHHHHHhcCCCccCEEE
Confidence 35888999999988777789999999999999999999999999999986 69999999998876 689999999999
Q ss_pred EEeCCCcccCceeccCCCCHHHHHHHHHhc
Q 013976 357 FFPAGNKSFDPINVDVDRTVVALYKFLKKN 386 (432)
Q Consensus 357 ~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~ 386 (432)
+|++|+.+. .+.|..+.+.|.+||+++
T Consensus 80 ~~~~G~~~~---~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 80 LVRDGKVID---KKVGALPKSQLKAWVESA 106 (107)
T ss_dssp EEETTEEEE---EEESCCCHHHHHHHHHHT
T ss_pred EEeCCEEEE---EecCCCCHHHHHHHHHhc
Confidence 998887654 688999999999999875
No 39
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.71 E-value=3e-18 Score=136.16 Aligned_cols=105 Identities=14% Similarity=0.103 Sum_probs=94.8
Q ss_pred ceEEEecccchhhhhcCCCcEEEEEeCCC--ChhhhhhHHHHHHHHHHhcCCCC-EEEEEEeCCCccc--ccCCCCCCce
Q 013976 280 DVKIVVGNNFDEIVLDESKDVLLEIYAPW--CGHCQAFEPTYNKLAKHLRGVDS-IVIAKMDGTTNEH--HRAKSDGFPT 354 (432)
Q Consensus 280 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~--c~~c~~~~~~~~~la~~~~~~~~-~~~~~id~~~~~~--~~~~i~~~P~ 354 (432)
.+..++..+|++.+ ..++++||+||++| |++|+.+.|++++|+..|.+ + +.|+++|+++|.. .+|+|.++||
T Consensus 18 g~~~~t~~~F~~~v-~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g--~~v~~~KVdvDe~~~lA~~ygV~sIPT 94 (140)
T 2qgv_A 18 GWTPVSESRLDDWL-TQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPD--YTWQVAIADLEQSEAIGDRFGAFRFPA 94 (140)
T ss_dssp TCEECCHHHHHHHH-HTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTT--SCCEEEECCHHHHHHHHHHHTCCSSSE
T ss_pred CCccCCHHHHHHHH-hCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCC--CeEEEEEEECCCCHHHHHHcCCccCCE
Confidence 46789999999988 46789999999999 99999999999999999987 6 9999999999887 6899999999
Q ss_pred EEEEeCCCcccCceeccCCCCHHHHHHHHHhcCCCC
Q 013976 355 ILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIP 390 (432)
Q Consensus 355 i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~ 390 (432)
+++|++|+.+. +..|..+.+.|.++|+++++.+
T Consensus 95 lilFk~G~~v~---~~~G~~~k~~l~~~i~~~l~~~ 127 (140)
T 2qgv_A 95 TLVFTGGNYRG---VLNGIHPWAELINLMRGLVEPQ 127 (140)
T ss_dssp EEEEETTEEEE---EEESCCCHHHHHHHHHHHHC--
T ss_pred EEEEECCEEEE---EEecCCCHHHHHHHHHHHhcCC
Confidence 99999999886 8889999999999999988533
No 40
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.71 E-value=6.5e-17 Score=126.29 Aligned_cols=103 Identities=20% Similarity=0.341 Sum_probs=93.2
Q ss_pred eEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEEEE
Q 013976 281 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFF 358 (432)
Q Consensus 281 v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~~~ 358 (432)
+..++.++|++.+ .+++++|.||++||++|+.+.|.|.+++..+++ ++.|+.+|++.+.. .+++|.++|++++|
T Consensus 3 v~~l~~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 78 (112)
T 2voc_A 3 IVKATDQSFSAET--SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD--KLKIVKIDVDENQETAGKYGVMSIPTLLVL 78 (112)
T ss_dssp CEECCTTTHHHHH--SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT--TCEEEEEETTTCCSHHHHTTCCSBSEEEEE
T ss_pred eEEecHHHHHHHh--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC--CcEEEEEECCCCHHHHHHcCCCcccEEEEE
Confidence 5678999999987 778999999999999999999999999999986 69999999998876 68999999999999
Q ss_pred eCCCcccCceeccCCCCHHHHHHHHHhcCCCC
Q 013976 359 PAGNKSFDPINVDVDRTVVALYKFLKKNASIP 390 (432)
Q Consensus 359 ~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~ 390 (432)
++|+.+. .+.|..+.+.|.+||.+++...
T Consensus 79 ~~G~~~~---~~~G~~~~~~l~~~l~~~~~~~ 107 (112)
T 2voc_A 79 KDGEVVE---TSVGFKPKEALQELVNKHLLEH 107 (112)
T ss_dssp ETTEEEE---EEESCCCHHHHHHHHHTTSCSC
T ss_pred eCCEEEE---EEeCCCCHHHHHHHHHHHHHhh
Confidence 8887654 7899999999999999988654
No 41
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=2.5e-17 Score=132.83 Aligned_cols=110 Identities=33% Similarity=0.562 Sum_probs=96.4
Q ss_pred CCceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcC--CCCEEEEEEeCCCccc--ccCCCCCCc
Q 013976 278 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRG--VDSIVIAKMDGTTNEH--HRAKSDGFP 353 (432)
Q Consensus 278 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~--~~~~~~~~id~~~~~~--~~~~i~~~P 353 (432)
.+.+..++..+|++.+...++++||+||++||++|+.+.|.|.+++..+.. ..++.|+.+|++.+.. .+++|.++|
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~P 85 (133)
T 1x5d_A 6 SGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFP 85 (133)
T ss_dssp CCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSSS
T ss_pred CCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCeeC
Confidence 456899999999998877789999999999999999999999999999971 1269999999998876 689999999
Q ss_pred eEEEEeCCCcccCceeccCCCCHHHHHHHHHhcCCCC
Q 013976 354 TILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIP 390 (432)
Q Consensus 354 ~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~ 390 (432)
++++|.+|+.+. .|.|..+.+.|.+||.+++...
T Consensus 86 t~~~~~~g~~~~---~~~G~~~~~~l~~~l~~~~~~~ 119 (133)
T 1x5d_A 86 TIKIFQKGESPV---DYDGGRTRSDIVSRALDLFSDN 119 (133)
T ss_dssp EEEEEETTEEEE---EECSCCSHHHHHHHHHHHHHHH
T ss_pred eEEEEeCCCceE---EecCCCCHHHHHHHHHHHhhcc
Confidence 999999886543 7999999999999999987543
No 42
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.70 E-value=4e-17 Score=127.16 Aligned_cols=104 Identities=31% Similarity=0.612 Sum_probs=93.0
Q ss_pred CceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCC-CCEEEEEEeCCCccc--ccCCCCCCceE
Q 013976 279 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGV-DSIVIAKMDGTTNEH--HRAKSDGFPTI 355 (432)
Q Consensus 279 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~-~~~~~~~id~~~~~~--~~~~i~~~P~i 355 (432)
+.+..++.++|++.+. +++++|.||++||++|+.+.|.|.+++..+... ..+.++.+|++.+.. .+++|.++|++
T Consensus 5 ~~v~~l~~~~~~~~~~--~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 82 (111)
T 3uvt_A 5 STVLALTENNFDDTIA--EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTL 82 (111)
T ss_dssp CCSEECCTTTHHHHHH--SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CcceEcChhhHHHHhc--CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccEE
Confidence 4588999999999885 779999999999999999999999999987643 479999999998876 78999999999
Q ss_pred EEEeCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 356 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 356 ~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
++|++|+.+. .+.|..+.+.|.+||++++
T Consensus 83 ~~~~~g~~~~---~~~g~~~~~~l~~~l~~~a 111 (111)
T 3uvt_A 83 LLFRGGKKVS---EHSGGRDLDSLHRFVLSQA 111 (111)
T ss_dssp EEEETTEEEE---EECSCCSHHHHHHHHHHHC
T ss_pred EEEeCCcEEE---eccCCcCHHHHHHHHHhcC
Confidence 9999997654 8999999999999999864
No 43
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.70 E-value=7.7e-17 Score=125.80 Aligned_cols=105 Identities=24% Similarity=0.459 Sum_probs=94.1
Q ss_pred CceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEE
Q 013976 279 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTIL 356 (432)
Q Consensus 279 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~ 356 (432)
+.|..++..+|.+.+.+.+++++|.||++||++|+.+.|.|.+++..+.+ ++.++.+|++.+.. .++++.++|+++
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 82 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD--KIEIVKLNIDENPGTAAKYGVMSIPTLN 82 (112)
T ss_dssp CCCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ceEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC--CeEEEEEEcCCCHHHHHhCCCCcccEEE
Confidence 45788999999988877789999999999999999999999999999976 69999999998876 689999999999
Q ss_pred EEeCCCcccCceeccCCCCHHHHHHHHHhcCC
Q 013976 357 FFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 388 (432)
Q Consensus 357 ~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 388 (432)
+|++|+.+. .+.|..+.+.|.+||++.+.
T Consensus 83 ~~~~G~~~~---~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 83 VYQGGEVAK---TIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp EEETTEEEE---EEESCCCHHHHHHHTHHHHC
T ss_pred EEeCCEEEE---EEeCCCCHHHHHHHHHHHhh
Confidence 999887654 78899999999999988753
No 44
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.70 E-value=1.5e-16 Score=128.91 Aligned_cols=112 Identities=24% Similarity=0.403 Sum_probs=97.4
Q ss_pred CCceEEEecccchhhhhc-----------CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--
Q 013976 278 DGDVKIVVGNNFDEIVLD-----------ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH-- 344 (432)
Q Consensus 278 ~~~v~~l~~~~~~~~~~~-----------~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~-- 344 (432)
+..|..|+..+|.+.+.+ .+++++|.||++||++|+.+.|.|.+++..+.+ ++.|+.+|++.+..
T Consensus 8 ~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~~l~ 85 (136)
T 2l5l_A 8 NGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDG--QIVIYKVDTEKEQELA 85 (136)
T ss_dssp TTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHH
T ss_pred CCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC--CEEEEEEeCCCCHHHH
Confidence 456889999999998764 468999999999999999999999999999986 69999999998875
Q ss_pred ccCCCCCCceEEEE-eCCCcccCceeccCCCCHHHHHHHHHhcCCCCCcccC
Q 013976 345 HRAKSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNASIPFKIQK 395 (432)
Q Consensus 345 ~~~~i~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~~~~~~ 395 (432)
.+++|.++|++++| ++|+.+ .+.|..+.+.|.+||+++.......+.
T Consensus 86 ~~~~v~~~Pt~~~~~~~G~~~----~~~G~~~~~~l~~~l~~~~~~~~~~~~ 133 (136)
T 2l5l_A 86 GAFGIRSIPSILFIPMEGKPE----MAQGAMPKASFKKAIDEFLLKKEGHHH 133 (136)
T ss_dssp HHTTCCSSCEEEEECSSSCCE----EEESCCCHHHHHHHHHHHHTSCTTSSC
T ss_pred HHcCCCCCCEEEEECCCCcEE----EEeCCCCHHHHHHHHHHHhhccCCCCC
Confidence 68999999999999 666543 789999999999999999876655543
No 45
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.69 E-value=9.4e-17 Score=123.90 Aligned_cols=101 Identities=27% Similarity=0.387 Sum_probs=92.0
Q ss_pred ceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEEE
Q 013976 280 DVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILF 357 (432)
Q Consensus 280 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~~ 357 (432)
.+..++.++|++.+ .+++++|.||++||++|+.+.|.|.++++.+.+ ++.|+.+|++.+.. ..+++.++|++++
T Consensus 4 ~v~~l~~~~~~~~~--~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 79 (106)
T 3die_A 4 AIVKVTDADFDSKV--ESGVQLVDFWATACGPCKMIAPVLEELAADYEG--KADILKLDVDENPSTAAKYEVMSIPTLIV 79 (106)
T ss_dssp CCEECCTTTHHHHS--CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSBSEEEE
T ss_pred ceEECCHHHHHHHh--cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CcEEEEEECCcCHHHHHhCCCcccCEEEE
Confidence 47889999999988 789999999999999999999999999999987 59999999998876 6899999999999
Q ss_pred EeCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 358 FPAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 358 ~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
|++|+.+. .+.|..+.+.|.+||++++
T Consensus 80 ~~~G~~~~---~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 80 FKDGQPVD---KVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp EETTEEEE---EEESCCCHHHHHHHHHTTC
T ss_pred EeCCeEEE---EEeCCCCHHHHHHHHHHhC
Confidence 99887664 7899999999999998763
No 46
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.69 E-value=8.6e-17 Score=129.17 Aligned_cols=107 Identities=29% Similarity=0.524 Sum_probs=95.8
Q ss_pred CCceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceE
Q 013976 278 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTI 355 (432)
Q Consensus 278 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i 355 (432)
.+.+..|+.++|++.+.+.+++++|+||++||++|+.+.|.|.+++..+.+ .+.|+.+|++.+.. .+++|.++|++
T Consensus 16 ~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 93 (130)
T 2dml_A 16 SDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKD--VVKVGAVNADKHQSLGGQYGVQGFPTI 93 (130)
T ss_dssp TSSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTT--TSEEEEEETTTCHHHHHHHTCCSSSEE
T ss_pred CCCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcC--ceEEEEEeCCCCHHHHHHcCCCccCEE
Confidence 567899999999998777789999999999999999999999999999987 59999999998876 68999999999
Q ss_pred EEEeCCCcccCceeccCCCCHHHHHHHHHhcCC
Q 013976 356 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 388 (432)
Q Consensus 356 ~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 388 (432)
++|.+|.. ....|.|..+.+.|.+||.+.+.
T Consensus 94 ~~~~~~~~--~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 94 KIFGANKN--KPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp EEESSCTT--SCEECCSCCSHHHHHHHHHHHHH
T ss_pred EEEeCCCC--eEEEeecCCCHHHHHHHHHHHHh
Confidence 99988875 24489999999999999998764
No 47
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.69 E-value=6e-17 Score=127.94 Aligned_cols=106 Identities=25% Similarity=0.425 Sum_probs=95.0
Q ss_pred CCCceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCce
Q 013976 277 NDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPT 354 (432)
Q Consensus 277 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~ 354 (432)
....+..++.++|++.+.+.+++++|+||++||++|+.+.|.|.+++..+.+ ++.|+.+|++.+.. .+++|.++|+
T Consensus 11 ~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~Pt 88 (119)
T 1w4v_A 11 GSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG--KVVMAKVDIDDHTDLAIEYEVSAVPT 88 (119)
T ss_dssp CCSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--SSEEEEEETTTTHHHHHHTTCCSSSE
T ss_pred CceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEeCCCCHHHHHHcCCCcccE
Confidence 3567899999999998877789999999999999999999999999999976 69999999998875 6899999999
Q ss_pred EEEEeCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 355 ILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 355 i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
+++|++|+.+. .+.|..+.+.|.+||++.+
T Consensus 89 ~~~~~~G~~~~---~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 89 VLAMKNGDVVD---KFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp EEEEETTEEEE---EEESCCCHHHHHHHHHHHH
T ss_pred EEEEeCCcEEE---EEcCCCCHHHHHHHHHHHh
Confidence 99998887654 7889899999999998764
No 48
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.69 E-value=4.9e-17 Score=132.41 Aligned_cols=107 Identities=22% Similarity=0.333 Sum_probs=96.8
Q ss_pred CCceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceE
Q 013976 278 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTI 355 (432)
Q Consensus 278 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i 355 (432)
...+..++.++|.+.+.+.++++||+||++||++|+.+.|.|.+++..+.+ ++.|+.+|++.+.. .+++|.++|++
T Consensus 5 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 82 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS--SAVFGRINIATNPWTAEKYGVQGTPTF 82 (140)
T ss_dssp TTTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TSEEEEEETTTCHHHHHHHTCCEESEE
T ss_pred CcceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC--ceEEEEEECCcCHhHHHHCCCCcCCEE
Confidence 356899999999977778889999999999999999999999999999987 69999999998876 68999999999
Q ss_pred EEEeCCCcccCceeccCCCCHHHHHHHHHhcCCC
Q 013976 356 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNASI 389 (432)
Q Consensus 356 ~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~ 389 (432)
++|++|+.+. .+.|..+.+.|.+||++.+..
T Consensus 83 ~~~~~G~~~~---~~~G~~~~~~l~~~l~~~l~~ 113 (140)
T 3hz4_A 83 KFFCHGRPVW---EQVGQIYPSILKNAVRDMLQH 113 (140)
T ss_dssp EEEETTEEEE---EEESSCCHHHHHHHHHHHHHH
T ss_pred EEEeCCcEEE---EEcCCCCHHHHHHHHHHHhcc
Confidence 9999987654 789999999999999988753
No 49
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.69 E-value=9.5e-17 Score=124.51 Aligned_cols=104 Identities=25% Similarity=0.477 Sum_probs=93.7
Q ss_pred CCceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceE
Q 013976 278 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTI 355 (432)
Q Consensus 278 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i 355 (432)
.+.+..++.++|++.+ ..+++++|+||++||++|+.+.|.|.+++..+.+ ++.|+.+|++.+.. ..+++.++|++
T Consensus 3 ~~~v~~l~~~~~~~~~-~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~i~~~Pt~ 79 (109)
T 3tco_A 3 EDVTLVLTEENFDEVI-RNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG--KAVFGRLNVDENQKIADKYSVLNIPTT 79 (109)
T ss_dssp CCCCEECCTTTHHHHH-HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCeEEEecHHHHHHHH-hcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC--CceEEEEccccCHHHHHhcCcccCCEE
Confidence 3468889999999977 5589999999999999999999999999999987 69999999998876 68999999999
Q ss_pred EEEeCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 356 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 356 ~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
++|++|+.+. .+.|..+.+.|.++|++++
T Consensus 80 ~~~~~g~~~~---~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 80 LIFVNGQLVD---SLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp EEEETTEEEE---EEESCCCHHHHHHHHHHHC
T ss_pred EEEcCCcEEE---eeeccCCHHHHHHHHHHHh
Confidence 9999887764 7899999999999999875
No 50
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.69 E-value=6.2e-16 Score=136.73 Aligned_cols=201 Identities=10% Similarity=0.068 Sum_probs=156.8
Q ss_pred eeCCHHHHHHHh-h--cCCeEEEEEecC-CCcc---hHHHHHHHhccCCCceEEEeC-----cHHHHhHcCCCCCCCCCe
Q 013976 50 NITTLDEAERVL-T--SETKVVLGYLNS-LVGS---ESEVLADASRLEDDVNFYQTT-----NPDVAKIFHLDSKVNRPA 117 (432)
Q Consensus 50 ~i~~~~~l~~~~-~--~~~~~vv~f~~~-~~~~---~~~~f~~~a~~~~~~~F~~~~-----~~~~~~~~~~~~~~~~p~ 117 (432)
...+.++++.++ . .++++++.|+.+ .|++ ....+.++++..+.+.|+.++ ++++++.||+.. .|+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~~~~v~~~~vd~~~~~~~~~~~~~~v~~---~Pt 81 (226)
T 1a8l_A 5 SDADKKVIKEEFFSKMVNPVKLIVFVRKDHCQYCDQLKQLVQELSELTDKLSYEIVDFDTPEGKELAKRYRIDR---APA 81 (226)
T ss_dssp CHHHHHHHHHHTGGGCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTTCTTEEEEEEETTSHHHHHHHHHTTCCS---SSE
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEEecCCCCchhHHHHHHHHHHHhhCCceEEEEEeCCCcccHHHHHHcCCCc---Cce
Confidence 344567777777 3 356777888877 7765 455677777667789998854 678999999986 799
Q ss_pred EEEEecCCCceecccCCCCCHHHHHHHHHhcCC--CceeecCCCchhhhccCCCcc-eEEEEEeC-cchhhhHHHHHHHH
Q 013976 118 LVMVKKETEKISYFADGKFDKSTIADFVFSNKL--PLVTIFTRENAPSVFESPIKN-QLLLFAVS-NDSEKLLPVFEEAA 193 (432)
Q Consensus 118 i~l~~~~~~~~~~y~~g~~~~~~l~~fi~~~~~--p~v~~l~~~~~~~~~~~~~~~-~i~~~~~~-~~~~~~~~~~~~~a 193 (432)
+++|+.+......| .|..+...+..|+..... .....++.+++..+...+.++ ++.||++| ++|+.+.+.+.+++
T Consensus 82 ~~~~~~g~~~~~~~-~G~~~~~~l~~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~ 160 (226)
T 1a8l_A 82 TTITQDGKDFGVRY-FGLPAGHEFAAFLEDIVDVSREETNLMDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFA 160 (226)
T ss_dssp EEEEETTBCCSEEE-ESCCCTTHHHHHHHHHHHHHHTCCCCCHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHH
T ss_pred EEEEcCCceeeEEE-eccCcHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHH
Confidence 99998644334677 788888889999876431 234567777777776666677 88899999 99999999999999
Q ss_pred Hhcc----CceEEEEEecCCcccccchhhhhCCCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHh
Q 013976 194 KSFK----GKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 260 (432)
Q Consensus 194 ~~~~----~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~ 260 (432)
..+. +++.|+.+|++. ++.+++.||+.+. |+++++..+. ....+.|..+.+.|.+|+...+
T Consensus 161 ~~~~~~~~~~v~~~~vd~~~---~~~l~~~~~v~~~--Pt~~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 161 IENTKAGKGKILGDMVEAIE---YPEWADQYNVMAV--PKIVIQVNGE-DRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp HHHHHTTCCCEEEEEEEGGG---CHHHHHHTTCCSS--CEEEEEETTE-EEEEEESCCCHHHHHHHHHHHH
T ss_pred HhcccccCCcEEEEEEEccc---CHHHHHhCCCccc--CeEEEEeCCc-eeEEEcCCCCHHHHHHHHHHhh
Confidence 9998 579999999987 5689999999998 9998886443 3456789999999999998865
No 51
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.69 E-value=9.1e-17 Score=126.92 Aligned_cols=111 Identities=34% Similarity=0.665 Sum_probs=97.0
Q ss_pred CCceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCC-CCEEEEEEeCCCccc--ccCCCCCCce
Q 013976 278 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGV-DSIVIAKMDGTTNEH--HRAKSDGFPT 354 (432)
Q Consensus 278 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~-~~~~~~~id~~~~~~--~~~~i~~~P~ 354 (432)
++.|..++.++|++.+ ..+++++|+||++||++|+.+.|.|.+++..++.. .++.++.+|++.+.. .++++.++|+
T Consensus 6 ~~~v~~l~~~~~~~~~-~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt 84 (120)
T 1mek_A 6 EDHVLVLRKSNFAEAL-AAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPT 84 (120)
T ss_dssp ETTEEECCTTTHHHHH-HHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSSSE
T ss_pred CCCcEEechhhHHHHH-ccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcccE
Confidence 4568899999999876 56789999999999999999999999999998753 379999999998765 6899999999
Q ss_pred EEEEeCCCcccCceeccCCCCHHHHHHHHHhcCCCC
Q 013976 355 ILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIP 390 (432)
Q Consensus 355 i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~ 390 (432)
+++|++|+.+ .+..|.|..+.+.|.+||+++++..
T Consensus 85 ~~~~~~g~~~-~~~~~~g~~~~~~l~~~l~~~~~~~ 119 (120)
T 1mek_A 85 IKFFRNGDTA-SPKEYTAGREADDIVNWLKKRTGPA 119 (120)
T ss_dssp EEEEESSCSS-SCEECCCCSSHHHHHHHHHTTSCCC
T ss_pred EEEEeCCCcC-CcccccCccCHHHHHHHHHhccCCC
Confidence 9999998865 3458999999999999999987653
No 52
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.69 E-value=1.3e-16 Score=125.02 Aligned_cols=105 Identities=22% Similarity=0.392 Sum_probs=94.6
Q ss_pred CceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEE
Q 013976 279 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTIL 356 (432)
Q Consensus 279 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~ 356 (432)
+.|..++.++|++.+...+++++|.||++||++|+.+.|.|.+++..+.+ ++.|+.+|++.+.. .++++.++|+++
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt~~ 84 (115)
T 1thx_A 7 KGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSD--RLKVVKLEIDPNPTTVKKYKVEGVPALR 84 (115)
T ss_dssp CSEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT--TCEEEEEESTTCHHHHHHTTCCSSSEEE
T ss_pred CceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCC--cEEEEEEEcCCCHHHHHHcCCCceeEEE
Confidence 45889999999998777789999999999999999999999999999986 59999999998876 689999999999
Q ss_pred EEeCCCcccCceeccCCCCHHHHHHHHHhcCC
Q 013976 357 FFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 388 (432)
Q Consensus 357 ~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 388 (432)
+|++|..+. .+.|..+.+.|.+||++++.
T Consensus 85 ~~~~G~~~~---~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 85 LVKGEQILD---STEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp EEETTEEEE---EEESCCCHHHHHHHHHHHHC
T ss_pred EEcCCEEEE---EecCCCCHHHHHHHHHHHhc
Confidence 998887654 68899999999999998765
No 53
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.68 E-value=2.8e-16 Score=126.93 Aligned_cols=108 Identities=16% Similarity=0.167 Sum_probs=91.8
Q ss_pred CCceEEEecccchhhhhcCC--CcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcccccCCCCCCceE
Q 013976 278 DGDVKIVVGNNFDEIVLDES--KDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKSDGFPTI 355 (432)
Q Consensus 278 ~~~v~~l~~~~~~~~~~~~~--~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~~~~~i~~~P~i 355 (432)
.+.+..|+..+|.+.+...+ +++||.||++||++|+.+.|.|.+++..+. ++.|+.+|++.+. .+++|.++||+
T Consensus 9 ~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~---~v~~~~vd~~~~~-~~~~i~~~Pt~ 84 (135)
T 2dbc_A 9 FGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP---ETKFVKAIVNSCI-EHYHDNCLPTI 84 (135)
T ss_dssp CCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS---SEEEEEECCSSSC-SSCCSSCCSEE
T ss_pred CCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC---CcEEEEEEhhcCc-ccCCCCCCCEE
Confidence 45688889999999886533 689999999999999999999999999985 4999999998875 78999999999
Q ss_pred EEEeCCCcccCceeccCCC-------CHHHHHHHHHhcCCCCCc
Q 013976 356 LFFPAGNKSFDPINVDVDR-------TVVALYKFLKKNASIPFK 392 (432)
Q Consensus 356 ~~~~~g~~~~~~~~y~g~~-------~~~~l~~fi~~~~~~~~~ 392 (432)
++|++|+.+. .+.|.. +.+.|.++|.++......
T Consensus 85 ~~~~~G~~v~---~~~G~~~~~~~~~~~~~l~~~l~~~~~i~~~ 125 (135)
T 2dbc_A 85 FVYKNGQIEG---KFIGIIECGGINLKLEELEWKLSEVGAIQSD 125 (135)
T ss_dssp EEESSSSCSE---EEESTTTTTCTTCCHHHHHHHHHHHTSSCCC
T ss_pred EEEECCEEEE---EEEeEEeeCCCcCCHHHHHHHHHHcCCcccc
Confidence 9999998765 566643 789999999998765433
No 54
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.68 E-value=1.2e-16 Score=123.65 Aligned_cols=102 Identities=23% Similarity=0.478 Sum_probs=91.9
Q ss_pred eEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEEEE
Q 013976 281 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFF 358 (432)
Q Consensus 281 v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~~~ 358 (432)
|..++.++|++.+.+.+++++|.||++||++|+.+.|.|.+++..+++ ++.++.+|++.+.. ..+++.++|++++|
T Consensus 3 v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 80 (107)
T 1dby_A 3 AGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD--KLKCVKLNTDESPNVASEYGIRSIPTIMVF 80 (107)
T ss_dssp CEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHHTCCSSCEEEEE
T ss_pred cEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC--ceEEEEEECCCCHHHHHHCCCCcCCEEEEE
Confidence 678899999998877789999999999999999999999999999986 59999999998865 68999999999999
Q ss_pred eCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 359 PAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 359 ~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
++|+.+. .+.|..+.+.|.++|++.+
T Consensus 81 ~~G~~~~---~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 81 KGGKKCE---TIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp SSSSEEE---EEESCCCHHHHHHHHHHHC
T ss_pred eCCEEEE---EEeCCCCHHHHHHHHHHHh
Confidence 8887654 7889999999999999865
No 55
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.68 E-value=1.3e-16 Score=132.09 Aligned_cols=106 Identities=23% Similarity=0.499 Sum_probs=95.3
Q ss_pred CCceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceE
Q 013976 278 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTI 355 (432)
Q Consensus 278 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i 355 (432)
.+.+..++..+|++.+ ..+++++|+||++||++|+.+.|.|++++..+.+ ++.|+.+|++.+.. .+++|.++|++
T Consensus 46 ~~~~~~l~~~~f~~~~-~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~--~v~~~~vd~~~~~~l~~~~~i~~~Pt~ 122 (155)
T 2ppt_A 46 TGKVAGIDPAILARAE-RDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAG--QVRLAKIDTQAHPAVAGRHRIQGIPAF 122 (155)
T ss_dssp CSSEEECCHHHHHHHT-TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TCEEEEEETTTSTHHHHHTTCCSSSEE
T ss_pred CCCCccCCHHHHHHHH-hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccC--CEEEEEEeCCccHHHHHHcCCCcCCEE
Confidence 5668889999999987 6778999999999999999999999999999987 59999999998876 68999999999
Q ss_pred EEEeCCCcccCceeccCCCCHHHHHHHHHhcCCC
Q 013976 356 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNASI 389 (432)
Q Consensus 356 ~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~ 389 (432)
++|++|+.+. .+.|..+.+.|.+||+++++.
T Consensus 123 ~~~~~G~~~~---~~~G~~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 123 ILFHKGRELA---RAAGARPASELVGFVRGKLGA 153 (155)
T ss_dssp EEEETTEEEE---EEESCCCHHHHHHHHHHHHC-
T ss_pred EEEeCCeEEE---EecCCCCHHHHHHHHHHHhcc
Confidence 9999887654 788999999999999998754
No 56
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.68 E-value=1.4e-16 Score=130.96 Aligned_cols=106 Identities=21% Similarity=0.507 Sum_probs=96.6
Q ss_pred CCceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceE
Q 013976 278 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTI 355 (432)
Q Consensus 278 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i 355 (432)
.+.+..+++.+|++.+ ..+++++|+||++||++|+.+.|.|.+++..+.+ ++.|+.+|++.+.. .+++|.++|++
T Consensus 37 ~~~v~~l~~~~~~~~~-~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~--~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 113 (148)
T 3p2a_A 37 DGEVINATAETLDKLL-QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAG--KVRFVKVNTEAEPALSTRFRIRSIPTI 113 (148)
T ss_dssp CCCCEECCTTTHHHHT-TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cCCceecCHHHHHHHH-hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCC--ceEEEEEECcCCHHHHHHCCCCccCEE
Confidence 5678999999999987 7789999999999999999999999999999986 69999999998877 68999999999
Q ss_pred EEEeCCCcccCceeccCCCCHHHHHHHHHhcCCC
Q 013976 356 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNASI 389 (432)
Q Consensus 356 ~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~ 389 (432)
++|++|+.+. .+.|..+.+.|.+||++++..
T Consensus 114 ~~~~~G~~~~---~~~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 114 MLYRNGKMID---MLNGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp EEEETTEEEE---EESSCCCHHHHHHHHHHHHHS
T ss_pred EEEECCeEEE---EEeCCCCHHHHHHHHHHHhcc
Confidence 9999887764 799999999999999998764
No 57
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.68 E-value=1.3e-16 Score=126.36 Aligned_cols=106 Identities=25% Similarity=0.443 Sum_probs=94.6
Q ss_pred CCceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceE
Q 013976 278 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTI 355 (432)
Q Consensus 278 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i 355 (432)
.+.+..++..+|.+.+...+++++|.||++||++|+.+.|.|.+++..+.+ ++.|+.+|++.+.. .+++|.++|++
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~i~~~Pt~ 88 (121)
T 2i1u_A 11 KSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERAT--DLTVAKLDVDTNPETARNFQVVSIPTL 88 (121)
T ss_dssp -CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEECCCCHHHHHhcCCCcCCEE
Confidence 456899999999988877789999999999999999999999999999976 69999999998876 68999999999
Q ss_pred EEEeCCCcccCceeccCCCCHHHHHHHHHhcCC
Q 013976 356 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 388 (432)
Q Consensus 356 ~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 388 (432)
++|++|+.+. .+.|..+.+.|.+||++++.
T Consensus 89 ~~~~~g~~~~---~~~G~~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 89 ILFKDGQPVK---RIVGAKGKAALLRELSDVVP 118 (121)
T ss_dssp EEEETTEEEE---EEESCCCHHHHHHHTCSCCC
T ss_pred EEEECCEEEE---EecCCCCHHHHHHHHHHHHh
Confidence 9999887654 78999999999999988764
No 58
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.67 E-value=2.8e-16 Score=138.37 Aligned_cols=114 Identities=23% Similarity=0.431 Sum_probs=101.1
Q ss_pred CCCCCceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCC
Q 013976 275 ETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGF 352 (432)
Q Consensus 275 ~~~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~ 352 (432)
....+.+..++.++|++.+.+.+++++|.||++||++|+.+.|.|.+++..+++ ++.|+.+|++.+.. .+++|.++
T Consensus 8 ~~~~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~ 85 (222)
T 3dxb_A 8 HPMSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNPGTAPKYGIRGI 85 (222)
T ss_dssp -CCSCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCTTTGGGGTCCSB
T ss_pred CCCCCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC--CcEEEEEECCCCHHHHHHcCCCcC
Confidence 334677999999999998778889999999999999999999999999999987 59999999999876 68999999
Q ss_pred ceEEEEeCCCcccCceeccCCCCHHHHHHHHHhcCCCCCcc
Q 013976 353 PTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPFKI 393 (432)
Q Consensus 353 P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~~~~ 393 (432)
|++++|++|+.+. .+.|..+.+.|.+||++++......
T Consensus 86 Pt~~~~~~G~~~~---~~~G~~~~~~l~~~l~~~l~~~~~~ 123 (222)
T 3dxb_A 86 PTLLLFKNGEVAA---TKVGALSKGQLKEFLDANLAGSAME 123 (222)
T ss_dssp SEEEEEETTEEEE---EEESCCCHHHHHHHHHHHSCCSCCB
T ss_pred CEEEEEECCeEEE---EeccccChHHHHHHHHhhccccccc
Confidence 9999999887654 7899999999999999998754433
No 59
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.67 E-value=2.1e-16 Score=121.72 Aligned_cols=102 Identities=26% Similarity=0.524 Sum_probs=91.4
Q ss_pred eEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEEEE
Q 013976 281 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFF 358 (432)
Q Consensus 281 v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~~~ 358 (432)
|..++.++|++.+...+++++|+||++||++|+.+.|.+.+++..+++ ++.++.+|++.+.. .++++.++|+++++
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 79 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG--KIAVYKLNTDEAPGIATQYNIRSIPTVLFF 79 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC--ceEEEEEcCcchHHHHHhCCCCcccEEEEE
Confidence 577899999998877789999999999999999999999999999987 59999999998865 68999999999999
Q ss_pred eCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 359 PAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 359 ~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
++|+.+. .+.|..+.+.+.++|++++
T Consensus 80 ~~g~~~~---~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 80 KNGERKE---SIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp ETTEEEE---EEEECCCHHHHHHHHHHHC
T ss_pred eCCeEEE---EEecCCCHHHHHHHHHhhC
Confidence 9887654 7889999999999998753
No 60
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.67 E-value=1.3e-16 Score=122.94 Aligned_cols=96 Identities=17% Similarity=0.161 Sum_probs=78.0
Q ss_pred ecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEEEEeCCC
Q 013976 285 VGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFFPAGN 362 (432)
Q Consensus 285 ~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~~~~~g~ 362 (432)
+.++|++.+ ..+++++|.||++||++|+.+.|.|.+++..+. ++.|+.+|++.+.. .+++|.++|++++|++|+
T Consensus 7 ~~~~~~~~~-~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~---~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~ 82 (105)
T 4euy_A 7 TIEELATYI-EEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN---YVEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGK 82 (105)
T ss_dssp ---CCSSST-TCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT---TEEEEEEEECCC---------CCCCEEEEEETTE
T ss_pred CHHHHHHHH-hcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC---CceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCe
Confidence 457888876 667999999999999999999999999999884 59999999998876 689999999999999887
Q ss_pred cccCceeccCCCCHHHHHHHHHhcC
Q 013976 363 KSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 363 ~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
.+. ++.|..+.+.|.++|+++.
T Consensus 83 ~~~---~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 83 EIL---RESRFISLENLERTIQLFE 104 (105)
T ss_dssp EEE---EEESSCCHHHHHHHHHTTC
T ss_pred EEE---EEeCCcCHHHHHHHHHHhh
Confidence 664 7889999999999999875
No 61
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.67 E-value=2.4e-16 Score=121.40 Aligned_cols=101 Identities=20% Similarity=0.392 Sum_probs=89.4
Q ss_pred eEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEEEE
Q 013976 281 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFF 358 (432)
Q Consensus 281 v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~~~ 358 (432)
|..++.++|++. ...+++++|.||++||++|+.+.|.|.+++..+.+ ++.++.+|++.+.. .++++.++|++++|
T Consensus 2 v~~l~~~~~~~~-~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 78 (105)
T 1nsw_A 2 TMTLTDANFQQA-IQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD--KVTVAKLNVDENPETTSQFGIMSIPTLILF 78 (105)
T ss_dssp CEEECTTTHHHH-HSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--TCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceeccHHhHHHH-HhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CcEEEEEECcCCHHHHHHcCCccccEEEEE
Confidence 578899999964 46678999999999999999999999999999986 59999999998876 68999999999999
Q ss_pred eCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 359 PAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 359 ~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
++|+.+. .+.|..+.+.|.++|++.+
T Consensus 79 ~~G~~~~---~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 79 KGGRPVK---QLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp ETTEEEE---EEESCCCHHHHHHHTTTTT
T ss_pred eCCeEEE---EEecCCCHHHHHHHHHHHh
Confidence 8887654 7889999999999998764
No 62
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.67 E-value=1.1e-16 Score=127.05 Aligned_cols=104 Identities=25% Similarity=0.506 Sum_probs=87.9
Q ss_pred CceEEEecccchhhhhcCCCcEEEEEeCCCCh--------------hhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc
Q 013976 279 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCG--------------HCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH 344 (432)
Q Consensus 279 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~--------------~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~ 344 (432)
+.|..++..+|++.+...+++++|.||++||+ +|+.+.|.|.+++..+.+ ++.++.+|++.+..
T Consensus 3 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~--~~~~~~vd~d~~~~ 80 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNPG 80 (123)
T ss_dssp CSCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC---------CEEEEEETTSCTT
T ss_pred CccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC--CeEEEEEECCCCHH
Confidence 34788999999987777889999999999999 999999999999999876 69999999998876
Q ss_pred --ccCCCCCCceEEEEeCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 345 --HRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 345 --~~~~i~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
.+++|.++|++++|++|+.+. .+.|..+.+.|.+||++++
T Consensus 81 l~~~~~v~~~Pt~~~~~~G~~~~---~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 81 TAPKYGIRGIPTLLLFKNGEVAA---TKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp TGGGGTCCBSSEEEEEESSSEEE---EEESCCCHHHHHHHHTTTC
T ss_pred HHHHcCCCccCEEEEEECCEEEE---EEeCCCCHHHHHHHHHHHh
Confidence 689999999999999887664 7899999999999998865
No 63
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.67 E-value=2.5e-16 Score=128.42 Aligned_cols=107 Identities=21% Similarity=0.366 Sum_probs=92.9
Q ss_pred CCceEEEecccchhhhhc-----------CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--
Q 013976 278 DGDVKIVVGNNFDEIVLD-----------ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH-- 344 (432)
Q Consensus 278 ~~~v~~l~~~~~~~~~~~-----------~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~-- 344 (432)
.+.+..++..+|...+.+ .+++++|.||++||++|+.+.|.|.+++..+.+ ++.|+.+|++.+..
T Consensus 21 ~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~ 98 (141)
T 3hxs_A 21 QSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAG--KIYIYKVNVDKEPELA 98 (141)
T ss_dssp --CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHH
T ss_pred CCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC--ceEEEEEECCCCHHHH
Confidence 567899999999998866 468999999999999999999999999999987 69999999998876
Q ss_pred ccCCCCCCceEEEEeCCCcccCceeccCCCCHHHHHHHHHhcCCC
Q 013976 345 HRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASI 389 (432)
Q Consensus 345 ~~~~i~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~ 389 (432)
..++|.++|++++|..+..+ +.+.|..+.+.|.+||++++..
T Consensus 99 ~~~~v~~~Pt~~~~~~~g~~---~~~~G~~~~~~l~~~l~~~l~k 140 (141)
T 3hxs_A 99 RDFGIQSIPTIWFVPMKGEP---QVNMGALSKEQLKGYIDKVLLK 140 (141)
T ss_dssp HHTTCCSSSEEEEECSSSCC---EEEESCCCHHHHHHHHHHTTC-
T ss_pred HHcCCCCcCEEEEEeCCCCE---EEEeCCCCHHHHHHHHHHHHcc
Confidence 68999999999999555433 3899999999999999998753
No 64
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.67 E-value=2.5e-16 Score=122.11 Aligned_cols=104 Identities=24% Similarity=0.444 Sum_probs=91.6
Q ss_pred ceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEEE
Q 013976 280 DVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILF 357 (432)
Q Consensus 280 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~~ 357 (432)
.|..++.++|++.+ ..+++++|+||++||++|+.+.|.|.+++..+.+ ++.++.+|++.+.. ..+++.++|++++
T Consensus 2 ~v~~l~~~~~~~~~-~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 78 (109)
T 2yzu_A 2 KPIEVTDQNFDETL-GQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG--KLLVAKLDVDENPKTAMRYRVMSIPTVIL 78 (109)
T ss_dssp CCEECCTTTHHHHH-HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT--TBEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred cceEccHhHHHHHh-cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC--ceEEEEEECCCCHhHHHhCCCCcCCEEEE
Confidence 47789999999654 6678999999999999999999999999999986 69999999998876 6899999999999
Q ss_pred EeCCCcccCceeccCCCCHHHHHHHHHhcCCC
Q 013976 358 FPAGNKSFDPINVDVDRTVVALYKFLKKNASI 389 (432)
Q Consensus 358 ~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~ 389 (432)
|++|+.+. .+.|..+.+.|.+||++++..
T Consensus 79 ~~~g~~~~---~~~g~~~~~~l~~~l~~~l~~ 107 (109)
T 2yzu_A 79 FKDGQPVE---VLVGAQPKRNYQAKIEKHLPA 107 (109)
T ss_dssp EETTEEEE---EEESCCCHHHHHHHHHTTC--
T ss_pred EeCCcEee---eEeCCCCHHHHHHHHHHHhhh
Confidence 98887653 788999999999999988753
No 65
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.67 E-value=1.4e-16 Score=126.45 Aligned_cols=105 Identities=21% Similarity=0.481 Sum_probs=92.5
Q ss_pred CceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEE
Q 013976 279 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTIL 356 (432)
Q Consensus 279 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~ 356 (432)
+.|..++.++|.+.+.+.+++++|.||++||++|+.+.|.|.+++..+.+ ++.|+.+|++.+.. .+++|.++|+++
T Consensus 3 ~~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 80 (122)
T 3aps_A 3 QASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG--KVRAGKVDCQAYPQTCQKAGIKAYPSVK 80 (122)
T ss_dssp CCSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred cchhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEeCcCCHHHHHHcCCCccceEE
Confidence 45788999999877777789999999999999999999999999999987 69999999998876 689999999999
Q ss_pred EEeCCCcccCceeccCC----CCHHHHHHHHHhcCC
Q 013976 357 FFPAGNKSFDPINVDVD----RTVVALYKFLKKNAS 388 (432)
Q Consensus 357 ~~~~g~~~~~~~~y~g~----~~~~~l~~fi~~~~~ 388 (432)
+|.+|..+. .+.|. .+.+.|.+||++.+.
T Consensus 81 ~~~~~~~~~---~~~g~~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 81 LYQYERAKK---SIWEEQINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp EEEEEGGGT---EEEEEEECCSCHHHHHHHHHHHHH
T ss_pred EEeCCCccc---eeeccccCcCCHHHHHHHHHHHHH
Confidence 997776553 56664 899999999998875
No 66
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.66 E-value=2.6e-15 Score=132.62 Aligned_cols=204 Identities=15% Similarity=0.092 Sum_probs=154.7
Q ss_pred eeecCCCchhhhccCCCcceEEEEEeCcchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEEE
Q 013976 153 VTIFTRENAPSVFESPIKNQLLLFAVSNDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAY 232 (432)
Q Consensus 153 v~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i 232 (432)
+...+.+++..++..+..++|-||.++ |....+.|.++|..+. .+.|+... .+.++..+++++ |+|++
T Consensus 12 ~~l~s~~~~~~~l~~~~v~vVgff~~~--~~~~~~~f~~~A~~l~-~~~F~~t~------~~~v~~~~~v~~---p~i~l 79 (227)
T 4f9z_D 12 TWLTDVPAAMEFIAATEVAVIGFFQDL--EIPAVPILHSMVQKFP-GVSFGIST------DSEVLTHYNITG---NTICL 79 (227)
T ss_dssp EECCSHHHHHHHHHTSSEEEEEECSCS--CSTHHHHHHHHTTTCT-TSEEEEEC------CHHHHHHTTCCS---SEEEE
T ss_pred eeeCCHHHHHHHHhcCCeEEEEEecCC--CchhHHHHHHHHHhCC-CceEEEEC------CHHHHHHcCCCC---CeEEE
Confidence 333355677776666655666677664 7788899999999995 79998754 347899999963 88888
Q ss_pred EeCCCCceecCC----CCCCHHHHHHHHHHHhcCCcCccccCCCCCCCCCCceEEEecccchhhhhcCCCcEEEEEeCCC
Q 013976 233 TGNDDAKKHILD----GELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPW 308 (432)
Q Consensus 233 ~~~~~~~~y~~~----~~~~~~~i~~fi~~~~~g~l~~~~~se~~p~~~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~ 308 (432)
+......+..|. |.++.+.|.+||....- +.|..++..++..++......++++|+.+|
T Consensus 80 fk~~~~~~~~~~~~~~g~~~~~~l~~fi~~~~~-----------------plv~e~t~~n~~~~~~~~~~~~~l~f~~~~ 142 (227)
T 4f9z_D 80 FRLVDNEQLNLEDEDIESIDATKLSRFIEINSL-----------------HMVTEYNPVTVIGLFNSVIQIHLLLIMNKA 142 (227)
T ss_dssp EETTTTEEEEECHHHHHTCCHHHHHHHHHHHCC-----------------CSEEECCHHHHHHHHHSSCCEEEEEEECTT
T ss_pred EEecCcccccccccccCCCCHHHHHHHHHHhCC-----------------CceeecCcccHHHHhccCCceEEEEEEcCC
Confidence 876444445566 47899999999999642 348889999999876444455667788999
Q ss_pred ChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCC--ccc--ccCCCC--CCceEEEEeCCCcccCceec-cCCCCHHHHHH
Q 013976 309 CGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT--NEH--HRAKSD--GFPTILFFPAGNKSFDPINV-DVDRTVVALYK 381 (432)
Q Consensus 309 c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~--~~~--~~~~i~--~~P~i~~~~~g~~~~~~~~y-~g~~~~~~l~~ 381 (432)
|.+|..+.+.|.++|+.+++ ++.|+.+|++. +.. ..+++. .+|+++++..+... ...+ .+..+.+.|.+
T Consensus 143 ~~~~~~~~~~~~~vAk~~k~--~i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~~--ky~~~~~~~t~~~i~~ 218 (227)
T 4f9z_D 143 SPEYEENMHRYQKAAKLFQG--KILFILVDSGMKENGKVISFFKLKESQLPALAIYQTLDDE--WDTLPTAEVSVEHVQN 218 (227)
T ss_dssp STTHHHHHHHHHHHHHHTTT--TCEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSCC--EEEETTCCCCHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhhC--CEEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEECCCCc--cccCCcCCCCHHHHHH
Confidence 99999999999999999998 69999999975 322 578887 89999999755432 1123 36899999999
Q ss_pred HHHhcCCC
Q 013976 382 FLKKNASI 389 (432)
Q Consensus 382 fi~~~~~~ 389 (432)
||++....
T Consensus 219 Fv~~~~~G 226 (227)
T 4f9z_D 219 FCDGFLSG 226 (227)
T ss_dssp HHHHHHTT
T ss_pred HHHHHhCC
Confidence 99987653
No 67
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.66 E-value=1.3e-16 Score=125.46 Aligned_cols=101 Identities=19% Similarity=0.346 Sum_probs=88.3
Q ss_pred ceEEEecccchhhhhc-CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEE
Q 013976 280 DVKIVVGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTIL 356 (432)
Q Consensus 280 ~v~~l~~~~~~~~~~~-~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~ 356 (432)
.+...+.++|++.+.+ .+++++|.||++||++|+.+.|.|.+++..+.+ +.|+.+|++.+.. .+++|.++|+++
T Consensus 13 ~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~---v~~~~vd~d~~~~l~~~~~v~~~Pt~~ 89 (116)
T 3qfa_C 13 VKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN---VIFLEVDVDDCQDVASECEVKSMPTFQ 89 (116)
T ss_dssp CBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT---SEEEEEETTTTHHHHHHTTCCSSSEEE
T ss_pred ccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC---CEEEEEECCCCHHHHHHcCCccccEEE
Confidence 4556778999997753 679999999999999999999999999988865 9999999998876 689999999999
Q ss_pred EEeCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 357 FFPAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 357 ~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
+|++|+.+. .+.|. +.+.|.++|++++
T Consensus 90 ~~~~G~~~~---~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 90 FFKKGQKVG---EFSGA-NKEKLEATINELV 116 (116)
T ss_dssp EESSSSEEE---EEESC-CHHHHHHHHHHHC
T ss_pred EEeCCeEEE---EEcCC-CHHHHHHHHHHhC
Confidence 998887764 68888 9999999998763
No 68
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.65 E-value=5e-16 Score=120.97 Aligned_cols=103 Identities=24% Similarity=0.386 Sum_probs=88.4
Q ss_pred CCceEEEecccchhhhhc-CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCC-Cccc--ccCCCCCCc
Q 013976 278 DGDVKIVVGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT-TNEH--HRAKSDGFP 353 (432)
Q Consensus 278 ~~~v~~l~~~~~~~~~~~-~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~-~~~~--~~~~i~~~P 353 (432)
.+.|..++.++|++.+.+ .+++++|.||++||++|+.+.|.|.+++..+.+ +.|+.+|++ .+.. .++++.++|
T Consensus 4 ~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~---v~~~~vd~~~~~~~~~~~~~v~~~P 80 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD---VIFLKLDCNQENKTLAKELGIRVVP 80 (111)
T ss_dssp TTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT---SEEEEEECSSTTHHHHHHHCCSBSS
T ss_pred cCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC---eEEEEEecCcchHHHHHHcCCCeee
Confidence 567999999999998864 578999999999999999999999999999864 999999998 4433 689999999
Q ss_pred eEEEEeCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 354 TILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 354 ~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
+++++++|+.+. .+.|. +.+.|.++|++..
T Consensus 81 t~~~~~~G~~~~---~~~G~-~~~~l~~~l~~~~ 110 (111)
T 2pu9_C 81 TFKILKENSVVG---EVTGA-KYDKLLEAIQAAR 110 (111)
T ss_dssp EEEEESSSSEEE---EEESS-CHHHHHHHHHHHH
T ss_pred EEEEEeCCcEEE---EEcCC-CHHHHHHHHHHhh
Confidence 999999987654 67776 5899999998764
No 69
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.65 E-value=4.9e-16 Score=124.00 Aligned_cols=106 Identities=26% Similarity=0.521 Sum_probs=91.7
Q ss_pred CCceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceE
Q 013976 278 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTI 355 (432)
Q Consensus 278 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i 355 (432)
.+.|..|+.++|++.+ . +.++|.||++||++|+.+.|.|.+++..+.+. ++.|+.+|++.+.. .+++|.++|++
T Consensus 6 ~~~v~~l~~~~f~~~~-~--~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~-~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 81 (126)
T 1x5e_A 6 SGNVRVITDENWRELL-E--GDWMIEFYAPWCPACQNLQPEWESFAEWGEDL-EVNIAKVDVTEQPGLSGRFIINALPTI 81 (126)
T ss_dssp CCSEEECCTTTHHHHT-S--SEEEEEEECSSCHHHHHHHHHHHHHHHHHGGG-TCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCccEEecHHHHHHHh-C--CCEEEEEECCCCHHHHHHhHHHHHHHHHhccC-CeEEEEEECcCCHHHHHHcCCcccCEE
Confidence 4568999999999866 2 24999999999999999999999999998752 69999999998876 68999999999
Q ss_pred EEEeCCCcccCceeccCCCCHHHHHHHHHhcCCCCC
Q 013976 356 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPF 391 (432)
Q Consensus 356 ~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~~ 391 (432)
++|++|+. ..+.|..+.+.|.+||+++.....
T Consensus 82 ~~~~~G~~----~~~~G~~~~~~l~~~l~~~~~~~~ 113 (126)
T 1x5e_A 82 YHCKDGEF----RRYQGPRTKKDFINFISDKEWKSI 113 (126)
T ss_dssp EEEETTEE----EECCSCCCHHHHHHHHHTCGGGGS
T ss_pred EEEeCCeE----EEeecCCCHHHHHHHHHHHhhccC
Confidence 99988863 289999999999999999875443
No 70
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.64 E-value=1.5e-16 Score=140.48 Aligned_cols=133 Identities=17% Similarity=0.226 Sum_probs=107.4
Q ss_pred HHHHHHHhcCCcCccccCCCCCCCCCCceEEE-ecccchhhhhc--CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCC
Q 013976 253 KTFGEDFLEGKLKPFFKSDPIPETNDGDVKIV-VGNNFDEIVLD--ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGV 329 (432)
Q Consensus 253 ~~fi~~~~~g~l~~~~~se~~p~~~~~~v~~l-~~~~~~~~~~~--~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~ 329 (432)
..|++.|..+++.+..++.+ +....+.|..| +..+|.+.+.. .++++||.||++||++|+.+.|.|.+||..+.+
T Consensus 87 e~fL~~~r~~Rl~el~~~~~-~~~~~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~- 164 (245)
T 1a0r_P 87 ENCLRKYRRQCMQDMHQKLS-FGPRYGFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM- 164 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHHC-CCCCCCSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT-
T ss_pred HHHHHHHHHHHHHHHHHHhh-ccCCCCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC-
Confidence 46899999999888776643 33456788889 68999998864 368999999999999999999999999999864
Q ss_pred CCEEEEEEeCCCccc-ccCCCCCCceEEEEeCCCcccCceecc---C-CCCHHHHHHHHHhcCCC
Q 013976 330 DSIVIAKMDGTTNEH-HRAKSDGFPTILFFPAGNKSFDPINVD---V-DRTVVALYKFLKKNASI 389 (432)
Q Consensus 330 ~~~~~~~id~~~~~~-~~~~i~~~P~i~~~~~g~~~~~~~~y~---g-~~~~~~l~~fi~~~~~~ 389 (432)
+.|+.||++.... ..|+|.++||+++|++|..+.+.+.+. | ..+.+.|..||.++...
T Consensus 165 --v~f~kVd~d~~~l~~~~~I~~~PTll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~g~l 227 (245)
T 1a0r_P 165 --VKFCKIKASNTGAGDRFSSDVLPTLLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEYGLL 227 (245)
T ss_dssp --SEEEEEEHHHHCCTTSSCTTTCSEEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTTTCS
T ss_pred --CEEEEEeCCcHHHHHHCCCCCCCEEEEEECCEEEEEEeCCcccccccccHHHHHHHHHHcCCC
Confidence 9999999977444 689999999999999997764333332 2 25788999999998754
No 71
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.64 E-value=7.1e-17 Score=140.85 Aligned_cols=131 Identities=18% Similarity=0.245 Sum_probs=107.0
Q ss_pred HHHHHHHHHhcCCcCccccCCCCCCCCCCceEEE-ecccchhhhhcCC--CcEEEEEeCCCChhhhhhHHHHHHHHHHhc
Q 013976 251 KIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIV-VGNNFDEIVLDES--KDVLLEIYAPWCGHCQAFEPTYNKLAKHLR 327 (432)
Q Consensus 251 ~i~~fi~~~~~g~l~~~~~se~~p~~~~~~v~~l-~~~~~~~~~~~~~--~~~lv~f~~~~c~~c~~~~~~~~~la~~~~ 327 (432)
+...|++.|..+++.+..++.. +....+.|..+ +..+|.+.+.+.+ +++||.||++||++|+.+.|.|.+++..+.
T Consensus 72 ~d~~fl~~~r~~Rl~el~~~~~-~~~~~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~ 150 (217)
T 2trc_P 72 EDEGCLRKYRRQCMQDMHQKLS-FGPRYGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP 150 (217)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHC-CCCCCCSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT
T ss_pred ccHHHHHHHHHHHHHHHHHHHH-hccCCCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC
Confidence 3467999999999977665543 33446778888 8899999886554 899999999999999999999999999885
Q ss_pred CCCCEEEEEEeCCCccc--ccCCCCCCceEEEEeCCCcccCceeccCCCC-------HHHHHHHHHhcCCC
Q 013976 328 GVDSIVIAKMDGTTNEH--HRAKSDGFPTILFFPAGNKSFDPINVDVDRT-------VVALYKFLKKNASI 389 (432)
Q Consensus 328 ~~~~~~~~~id~~~~~~--~~~~i~~~P~i~~~~~g~~~~~~~~y~g~~~-------~~~l~~fi~~~~~~ 389 (432)
.+.|+.||++ +.. ..++|.++||+++|++|..+. .+.|..+ .+.|..||.++...
T Consensus 151 ---~v~f~~vd~~-~~~l~~~~~i~~~PTl~~~~~G~~v~---~~~G~~~~~g~~~~~~~Le~~L~~~g~l 214 (217)
T 2trc_P 151 ---MVKFCKIRAS-NTGAGDRFSSDVLPTLLVYKGGELIS---NFISVAEQFAEDFFAADVESFLNEYGLL 214 (217)
T ss_dssp ---TSEEEEEEHH-HHTCSTTSCGGGCSEEEEEETTEEEE---EETTGGGGSCSSCCHHHHHHHHHTTTCS
T ss_pred ---CeEEEEEECC-cHHHHHHCCCCCCCEEEEEECCEEEE---EEeCCcccCcccCCHHHHHHHHHHcCCC
Confidence 5999999998 433 689999999999999987654 6666544 59999999988653
No 72
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.64 E-value=6e-16 Score=118.73 Aligned_cols=101 Identities=20% Similarity=0.366 Sum_probs=89.9
Q ss_pred eEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEEEE
Q 013976 281 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFF 358 (432)
Q Consensus 281 v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~~~ 358 (432)
|..++.++|++.+ ..+++++|+||++||++|+.+.+.+.+++..+.+ +.++.+|++.+.. ..+++.++|++++|
T Consensus 1 V~~l~~~~~~~~~-~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 76 (104)
T 2e0q_A 1 VIHLDSKNFDSFL-ASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ---VGFGKLNSDENPDIAARYGVMSLPTVIFF 76 (104)
T ss_dssp CEECCTTTHHHHH-HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT---SEEEEEETTTCHHHHHHTTCCSSCEEEEE
T ss_pred CeecCHHHHHHHH-hcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC---ceEEEEECCCCHHHHHhCCccccCEEEEE
Confidence 4578899999987 6678999999999999999999999999999875 9999999998876 68999999999999
Q ss_pred eCCCcccCceeccCCCCHHHHHHHHHhcCC
Q 013976 359 PAGNKSFDPINVDVDRTVVALYKFLKKNAS 388 (432)
Q Consensus 359 ~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 388 (432)
++|+.+. .+.|..+.+.|.+||+++++
T Consensus 77 ~~g~~~~---~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 77 KDGEPVD---EIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp ETTEEEE---EEESCCCHHHHHHHHHHHHT
T ss_pred ECCeEhh---hccCCCCHHHHHHHHHHHhc
Confidence 8887654 78899999999999998754
No 73
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.64 E-value=9.8e-16 Score=118.45 Aligned_cols=100 Identities=18% Similarity=0.272 Sum_probs=84.7
Q ss_pred eEEE-ecccchhhhhc-CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEE
Q 013976 281 VKIV-VGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTIL 356 (432)
Q Consensus 281 v~~l-~~~~~~~~~~~-~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~ 356 (432)
+..+ +.++|++.+.+ .+++++|.||++||++|+.+.|.|.+++..+. ++.|+.+|++.+.. .++++.++|+++
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 79 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP---QAVFLEVDVHQCQGTAATNNISATPTFQ 79 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHHTTCCSSSEEE
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC---CcEEEEEECccCHHHHHhcCCCcccEEE
Confidence 4455 45889987754 67899999999999999999999999999983 59999999998876 689999999999
Q ss_pred EEeCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 357 FFPAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 357 ~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
+|++|+.+. .+.| .+.+.|.+||++++
T Consensus 80 ~~~~G~~~~---~~~G-~~~~~l~~~l~~~l 106 (107)
T 1gh2_A 80 FFRNKVRID---QYQG-ADAVGLEEKIKQHL 106 (107)
T ss_dssp EEETTEEEE---EEES-SCHHHHHHHHHHHH
T ss_pred EEECCeEEE---EEeC-CCHHHHHHHHHHhc
Confidence 999987664 6778 45566999998865
No 74
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.63 E-value=7.9e-16 Score=125.23 Aligned_cols=105 Identities=21% Similarity=0.332 Sum_probs=79.8
Q ss_pred CceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEE
Q 013976 279 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTIL 356 (432)
Q Consensus 279 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~ 356 (432)
+.+..++.++|.+.+.+.++ ++|.||++||++|+.+.|.|.+++..+.+ ++.|+.+|++.+.. ..+++.++|+++
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 109 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPL-TLVDFFAPWCGPCRLVSPILEELARDHAG--RLKVVKVNVDEHPGLAARYGVRSVPTLV 109 (140)
T ss_dssp ----------------CCCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CccccCCHHHHHHHHHcCCC-EEEEEECCCCHHHHHHHHHHHHHHHHccC--ceEEEEEECCCCHHHHHHCCCCccCEEE
Confidence 56788999999998866666 99999999999999999999999999986 69999999998876 689999999999
Q ss_pred EEeCCCcccCceeccCCCCHHHHHHHHHhcCCC
Q 013976 357 FFPAGNKSFDPINVDVDRTVVALYKFLKKNASI 389 (432)
Q Consensus 357 ~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~ 389 (432)
+|++|..+. .+.|..+.+.|.+||+++++.
T Consensus 110 ~~~~G~~~~---~~~G~~~~~~l~~~i~~~l~~ 139 (140)
T 1v98_A 110 LFRRGAPVA---TWVGASPRRVLEERLRPYLEG 139 (140)
T ss_dssp EEETTEEEE---EEESCCCHHHHHHHHHHHHTC
T ss_pred EEeCCcEEE---EEeCCCCHHHHHHHHHHHHcc
Confidence 999887654 788999999999999987653
No 75
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.63 E-value=1e-15 Score=121.74 Aligned_cols=102 Identities=23% Similarity=0.315 Sum_probs=90.1
Q ss_pred CceEEEec-ccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceE
Q 013976 279 GDVKIVVG-NNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTI 355 (432)
Q Consensus 279 ~~v~~l~~-~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i 355 (432)
.-+..|+. ++|++.+ ..+++++|.||++||++|+.+.|.|.+++..+. ++.|+.+|++.+.. ..++|.++|++
T Consensus 19 ~mv~~l~~~~~f~~~~-~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~---~v~~~~vd~d~~~~l~~~~~v~~~Pt~ 94 (125)
T 1r26_A 19 PSVVDVYSVEQFRNIM-SEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP---TVKFAKVDADNNSEIVSKCRVLQLPTF 94 (125)
T ss_dssp SCCEEECCHHHHHHHH-HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT---TSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cceEECCCHHHHHHHH-ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC---CCEEEEEECCCCHHHHHHcCCCcccEE
Confidence 34889999 9999987 778999999999999999999999999999984 59999999998876 68999999999
Q ss_pred EEEeCCCcccCceeccCCCCHHHHHHHHHhcCC
Q 013976 356 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 388 (432)
Q Consensus 356 ~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 388 (432)
++|++|..+. .+.| .+.+.|.++|++.+.
T Consensus 95 ~i~~~G~~~~---~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 95 IIARSGKMLG---HVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp EEEETTEEEE---EEES-SCHHHHHHHHHHHHH
T ss_pred EEEeCCeEEE---EEeC-CCHHHHHHHHHHHhc
Confidence 9999887654 6788 788999999988753
No 76
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.63 E-value=1.2e-15 Score=117.51 Aligned_cols=101 Identities=25% Similarity=0.440 Sum_probs=87.7
Q ss_pred eEEEec-ccchhhhhc-CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEE
Q 013976 281 VKIVVG-NNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTIL 356 (432)
Q Consensus 281 v~~l~~-~~~~~~~~~-~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~ 356 (432)
|..++. ++|++.+.+ .+++++|.||++||++|+.+.|.|.+++..++. ++.++.+|++.+.. .++++.++|+++
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 79 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD--NVVVLKVDVDECEDIAMEYNISSMPTFV 79 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC--CeEEEEEeccchHHHHHHcCCCcccEEE
Confidence 456677 889887754 678999999999999999999999999999975 69999999998876 689999999999
Q ss_pred EEeCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 357 FFPAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 357 ~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
+|++|+.+. .+.| .+.+.|.+||++++
T Consensus 80 ~~~~G~~~~---~~~g-~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 80 FLKNGVKVE---EFAG-ANAKRLEDVIKANI 106 (106)
T ss_dssp EEETTEEEE---EEES-CCHHHHHHHHHHTC
T ss_pred EEcCCcEEE---EEcC-CCHHHHHHHHHHhC
Confidence 999887654 6788 78999999998763
No 77
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.63 E-value=7.9e-16 Score=119.41 Aligned_cols=100 Identities=23% Similarity=0.460 Sum_probs=86.3
Q ss_pred ceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEEE
Q 013976 280 DVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILF 357 (432)
Q Consensus 280 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~~ 357 (432)
.....+..+|++.+ ..+++++|.||++||++|+.+.|.|.+++..+.+ +.|+.+|++.+.. .+++|.++|++++
T Consensus 8 ~~~~~~~~~f~~~~-~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~---~~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 83 (109)
T 3f3q_A 8 VTQFKTASEFDSAI-AQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ---ADFYKLDVDELGDVAQKNEVSAMPTLLL 83 (109)
T ss_dssp CEECCSHHHHHHHT-TSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT---SEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred ccCCCCHHHHHHHH-hcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC---CEEEEEECCCCHHHHHHcCCCccCEEEE
Confidence 34556678998876 5689999999999999999999999999999865 8999999998876 6899999999999
Q ss_pred EeCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 358 FPAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 358 ~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
|.+|+.+. .+.|. +.+.|.++|++++
T Consensus 84 ~~~G~~~~---~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 84 FKNGKEVA---KVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp EETTEEEE---EEESS-CHHHHHHHHHHHC
T ss_pred EECCEEEE---EEeCC-CHHHHHHHHHhhC
Confidence 99887664 67776 7799999998864
No 78
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.62 E-value=9.5e-16 Score=133.83 Aligned_cols=108 Identities=20% Similarity=0.468 Sum_probs=96.6
Q ss_pred CCceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceE
Q 013976 278 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTI 355 (432)
Q Consensus 278 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i 355 (432)
+..+..+++.+|+..+ ..++++||.||++||++|+.+.|.|.+++..+.+ .+.|+.+|++.+.. ..++|.++|++
T Consensus 96 ~~~v~~l~~~~f~~~~-~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 172 (210)
T 3apq_A 96 DPEIITLERREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG--LLRIGAVNCGDDRMLCRMKGVNSYPSL 172 (210)
T ss_dssp CTTSEECCHHHHHHHH-HHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT--TBEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCceEEecHHHHHHHH-ccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC--ceEEEEEECCccHHHHHHcCCCcCCeE
Confidence 4568899999999987 6678999999999999999999999999999987 69999999998876 68999999999
Q ss_pred EEEeCCCcccCceeccCCCCHHHHHHHHHhcCCCCC
Q 013976 356 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPF 391 (432)
Q Consensus 356 ~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~~ 391 (432)
++|++|..+. .+.|..+.+.|.+||.+++....
T Consensus 173 ~~~~~G~~~~---~~~G~~~~~~l~~~i~~~l~~~~ 205 (210)
T 3apq_A 173 FIFRSGMAAV---KYNGDRSKESLVAFAMQHVRSTV 205 (210)
T ss_dssp EEECTTSCCE---ECCSCCCHHHHHHHHHHHHHCCS
T ss_pred EEEECCCcee---EecCCCCHHHHHHHHHHhCcccc
Confidence 9998887654 89999999999999999876544
No 79
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.62 E-value=1.3e-15 Score=139.86 Aligned_cols=105 Identities=17% Similarity=0.313 Sum_probs=94.7
Q ss_pred CCceEEEecccchhhhhc-CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCce
Q 013976 278 DGDVKIVVGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPT 354 (432)
Q Consensus 278 ~~~v~~l~~~~~~~~~~~-~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~ 354 (432)
.+.|..++..+|++.+.. .+++++|.||++||++|+.+.|.|.++++.+.+ ++.|+.||++.+.. ..++|.++||
T Consensus 6 ~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt 83 (287)
T 3qou_A 6 VENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNG--QFILAKLDCDAEQMIAAQFGLRAIPT 83 (287)
T ss_dssp CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS--SSEEEEEETTTCHHHHHTTTCCSSSE
T ss_pred CCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCC--CeEEEEEeCccCHHHHHHcCCCCCCe
Confidence 456899999999997643 268999999999999999999999999999987 69999999998876 7899999999
Q ss_pred EEEEeCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 355 ILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 355 i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
+++|++|+.+. .+.|..+.+.+..||.++.
T Consensus 84 ~~~~~~G~~~~---~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 84 VYLFQNGQPVD---GFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp EEEEETTEEEE---EEESCCCHHHHHHHHHHHS
T ss_pred EEEEECCEEEE---EeeCCCCHHHHHHHHHHHc
Confidence 99999987664 7899999999999999986
No 80
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.62 E-value=9.4e-16 Score=125.93 Aligned_cols=99 Identities=13% Similarity=0.102 Sum_probs=88.0
Q ss_pred Eecccchhhhh-cCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEEEEeC
Q 013976 284 VVGNNFDEIVL-DESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFFPA 360 (432)
Q Consensus 284 l~~~~~~~~~~-~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~~~~~ 360 (432)
.+.++|++.+. ..++++||.|||+||++|+.+.|.|.+++..+.+ .+.|+.+|++++.. ..++|.++|+++++++
T Consensus 9 ~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~--~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~ 86 (149)
T 3gix_A 9 TSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSK--MAAIYLVDVDQTAVYTQYFDISYIPSTVFFFN 86 (149)
T ss_dssp CSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTT--TEEEEEEETTTCCHHHHHTTCCSSSEEEEEET
T ss_pred CCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccC--ceEEEEEECCcCHHHHHHcCCCccCeEEEEEC
Confidence 35678998886 5679999999999999999999999999999876 59999999998877 6899999999999999
Q ss_pred CCcc---------cCceeccC-CCCHHHHHHHHHhcC
Q 013976 361 GNKS---------FDPINVDV-DRTVVALYKFLKKNA 387 (432)
Q Consensus 361 g~~~---------~~~~~y~g-~~~~~~l~~fi~~~~ 387 (432)
|+.+ . .+.| ..+.+.|.++|++..
T Consensus 87 G~~v~~~~g~~~~~---~~~G~~~~~~~l~~~l~~~~ 120 (149)
T 3gix_A 87 GQHMKVDYGSPDHT---KFVGSFKTKQDFIDLIEVIY 120 (149)
T ss_dssp TEEEEEECSSSCCS---CEESCCSSHHHHHHHHHHHH
T ss_pred CeEEEeecCCCCCC---eEeeecCCHHHHHHHHHHHH
Confidence 9776 4 7888 889999999999875
No 81
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.62 E-value=9.4e-16 Score=122.71 Aligned_cols=95 Identities=23% Similarity=0.320 Sum_probs=82.7
Q ss_pred ccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEEEEeCCCcc
Q 013976 287 NNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFFPAGNKS 364 (432)
Q Consensus 287 ~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~~~~~g~~~ 364 (432)
.++.+.....+++++|.||++||++|+.+.|.|.++++.+++ ++.++.+|++.+.. .+++|.++|++++|++|+.+
T Consensus 32 ~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~ 109 (128)
T 3ul3_B 32 SNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK--RIYLLKVDLDKNESLARKFSVKSLPTIILLKNKTML 109 (128)
T ss_dssp CSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG--GEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETTEEE
T ss_pred ccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CeEEEEEECCCCHHHHHHcCCCCcCEEEEEECCEEE
Confidence 333333456789999999999999999999999999999986 79999999998876 68999999999999988765
Q ss_pred cCceeccCCCCHHHHHHHHHhc
Q 013976 365 FDPINVDVDRTVVALYKFLKKN 386 (432)
Q Consensus 365 ~~~~~y~g~~~~~~l~~fi~~~ 386 (432)
. .+.|..+.+.|.+||+++
T Consensus 110 ~---~~~G~~~~~~l~~~l~~~ 128 (128)
T 3ul3_B 110 A---RKDHFVSSNDLIALIKKH 128 (128)
T ss_dssp E---EESSCCCHHHHHHHHTTC
T ss_pred E---EecCCCCHHHHHHHHHhC
Confidence 4 788999999999999864
No 82
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.62 E-value=1.1e-15 Score=119.09 Aligned_cols=103 Identities=20% Similarity=0.430 Sum_probs=89.0
Q ss_pred ceEEE-ecccchhhhhc-C--CCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCc
Q 013976 280 DVKIV-VGNNFDEIVLD-E--SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFP 353 (432)
Q Consensus 280 ~v~~l-~~~~~~~~~~~-~--~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P 353 (432)
.|..+ +.++|++.+.. . +++++|.||++||++|+.+.|.|.+++..+.+ ++.|+.+|++.+.. ..+++.++|
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~P 80 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAG--KVIFLKVDVDAVAAVAEAAGITAMP 80 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTTHHHHHHHTCCBSS
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC--CeEEEEEECCchHHHHHHcCCCccc
Confidence 46777 45889988754 3 78999999999999999999999999999986 69999999998765 689999999
Q ss_pred eEEEEeCCCcccCceeccCCCCHHHHHHHHHhcCC
Q 013976 354 TILFFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 388 (432)
Q Consensus 354 ~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 388 (432)
++++|++|+.+. .+.|. +.+.|.+||+++++
T Consensus 81 t~~~~~~G~~~~---~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 81 TFHVYKDGVKAD---DLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp EEEEEETTEEEE---EEESC-CHHHHHHHHHHHHC
T ss_pred EEEEEECCeEEE---EEcCC-CHHHHHHHHHHHhc
Confidence 999999887654 68887 99999999998764
No 83
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.61 E-value=1.6e-15 Score=120.21 Aligned_cols=104 Identities=21% Similarity=0.349 Sum_probs=91.4
Q ss_pred CCceEEEecccchhhhhc---CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCC
Q 013976 278 DGDVKIVVGNNFDEIVLD---ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGF 352 (432)
Q Consensus 278 ~~~v~~l~~~~~~~~~~~---~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~ 352 (432)
.+.+..++.++|++.+.. .+++++|.||++||++|+.+.|.|.+++..+.+ +.|+.+|++.+.. .++++.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~~vd~~~~~~~~~~~~v~~~ 88 (122)
T 2vlu_A 12 AEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN---AVFLKVDVDELKPIAEQFSVEAM 88 (122)
T ss_dssp CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT---SEEEEEETTTCHHHHHHTTCCSS
T ss_pred CcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC---cEEEEEECCCCHHHHHHcCCCcc
Confidence 345777888999998865 678999999999999999999999999999875 9999999998876 68999999
Q ss_pred ceEEEEeCCCcccCceeccCCCCHHHHHHHHHhcCC
Q 013976 353 PTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 388 (432)
Q Consensus 353 P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 388 (432)
|++++|++|+.+. .+.|.. .+.|.+||++++.
T Consensus 89 Pt~~~~~~G~~~~---~~~G~~-~~~l~~~l~~~l~ 120 (122)
T 2vlu_A 89 PTFLFMKEGDVKD---RVVGAI-KEELTAKVGLHAA 120 (122)
T ss_dssp SEEEEEETTEEEE---EEESSC-HHHHHHHHHHHHS
T ss_pred cEEEEEeCCEEEE---EEeCcC-HHHHHHHHHHHhc
Confidence 9999999887654 788877 9999999998764
No 84
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.61 E-value=3.5e-15 Score=137.00 Aligned_cols=158 Identities=16% Similarity=0.266 Sum_probs=122.7
Q ss_pred CCCcceeeeccCcccccCCC--------cccCccCCCCCChhHHHHHHHHhhCCCceeeCCHHHHHHHhhcCCeEEEEEe
Q 013976 1 MSWRTSTTFRASRRFTSSST--------ASIKLIMAAAPSKDAIVTWIKKKIGPGIYNITTLDEAERVLTSETKVVLGYL 72 (432)
Q Consensus 1 ~~~Ptl~~f~~g~~~~~~~~--------~~~~~~Y~G~~~~~~i~~~l~~~~~~~~~~i~~~~~l~~~~~~~~~~vv~f~ 72 (432)
.++||+++|++|+......- ......|.|.|+++.|+.||.+++.+++..|.+.++++++++.....+|++|
T Consensus 90 ~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~~~~~~vi~f 169 (298)
T 3ed3_A 90 NGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRKSPKLSVVLF 169 (298)
T ss_dssp CBSSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTSCSSEEEEEE
T ss_pred CccceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhcCCceEEEEE
Confidence 47999999999973110000 0011359999999999999999999999999999999999987544444455
Q ss_pred cCCCcchHHHHHHHh-ccCCCceEEEeCcHHHHhHcCC-----CC---------------CCCCCeEEEEecCCCceecc
Q 013976 73 NSLVGSESEVLADAS-RLEDDVNFYQTTNPDVAKIFHL-----DS---------------KVNRPALVMVKKETEKISYF 131 (432)
Q Consensus 73 ~~~~~~~~~~f~~~a-~~~~~~~F~~~~~~~~~~~~~~-----~~---------------~~~~p~i~l~~~~~~~~~~y 131 (432)
.. +......|..+| .+++.+.|+.+.+.+++..+++ +. ..+.|+|++|+..++....|
T Consensus 170 s~-~~~~~~~f~~~A~~~~~~~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~~y 248 (298)
T 3ed3_A 170 SK-QDKISPVYKSIALDWLGKFDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFWEY 248 (298)
T ss_dssp ES-SSSCCHHHHHHHHHTBTTEEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEEEC
T ss_pred cC-CCcchHHHHHHHHHhhcCcEEEEEcchHhhhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCCceEEe
Confidence 43 456778999999 7889999999998887754422 00 02469999999988899999
Q ss_pred cC-CCCCHHHHHHHHH--hcCCCceeecCCCc
Q 013976 132 AD-GKFDKSTIADFVF--SNKLPLVTIFTREN 160 (432)
Q Consensus 132 ~~-g~~~~~~l~~fi~--~~~~p~v~~l~~~~ 160 (432)
. +.++.++|..||. .+..|.+.+++..+
T Consensus 249 -~g~~~~~~~i~~fi~~~~~~~p~~~~ls~~~ 279 (298)
T 3ed3_A 249 -EGNSINKNDISKFLRDTFSITPNEGPFSRRS 279 (298)
T ss_dssp -CCSSCCHHHHHHHHHHHHTCCCSSSTTSHHH
T ss_pred -ccccCCHHHHHHHHHhhcCCCCCcCCCchHH
Confidence 6 5789999999999 88999999999865
No 85
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.61 E-value=1.6e-14 Score=127.91 Aligned_cols=194 Identities=8% Similarity=0.030 Sum_probs=147.1
Q ss_pred CHHHHHHHh--hcCCeEEEEEecCC-----Ccc---hHHHHHHHh-cc--CCCceEEEeC---cHHHHhHcCCCCCCCCC
Q 013976 53 TLDEAERVL--TSETKVVLGYLNSL-----VGS---ESEVLADAS-RL--EDDVNFYQTT---NPDVAKIFHLDSKVNRP 116 (432)
Q Consensus 53 ~~~~l~~~~--~~~~~~vv~f~~~~-----~~~---~~~~f~~~a-~~--~~~~~F~~~~---~~~~~~~~~~~~~~~~p 116 (432)
+.++++.++ +....++|.+|.+. |.+ ....+.++| .+ .+.+.|+.++ ++++|++|++.. +|
T Consensus 7 ~~~~l~~~~~~~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~---~P 83 (229)
T 2ywm_A 7 VRMQLKELAQKEFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGVDR---VP 83 (229)
T ss_dssp HHHHHHHHHHHHCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTCCB---SS
T ss_pred HHHHHHHHHHHhccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCCCc---Cc
Confidence 456777777 33444444455332 333 334455554 33 6778998864 788999999986 79
Q ss_pred eEEEEecCCCceecccCCCCCHHHHHHHHHhcC--CCceeecCCCchhhhccCCCcc-eEEEEEeC-cchhhhHHHHHHH
Q 013976 117 ALVMVKKETEKISYFADGKFDKSTIADFVFSNK--LPLVTIFTRENAPSVFESPIKN-QLLLFAVS-NDSEKLLPVFEEA 192 (432)
Q Consensus 117 ~i~l~~~~~~~~~~y~~g~~~~~~l~~fi~~~~--~p~v~~l~~~~~~~~~~~~~~~-~i~~~~~~-~~~~~~~~~~~~~ 192 (432)
++++|+. +.....| .|..+..+|..|+.... .+.+..++.+++..+...+.++ ++.||++| ++|+.+.+.+.++
T Consensus 84 tl~~~~~-~~~~~~~-~G~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~ 161 (229)
T 2ywm_A 84 TIVIEGD-KDYGIRY-IGLPAGLEFTTLINGIFHVSQRKPQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDF 161 (229)
T ss_dssp EEEEESS-SCCCEEE-ESCCCTTHHHHHHHHHHHHHTTCCSCCHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHH
T ss_pred EEEEECC-Cccccee-cCCccHHHHHHHHHHHHhccCCccCCCHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHH
Confidence 9999974 3456778 89888899999997643 2346778888888877666666 55699999 9999999999999
Q ss_pred HHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 193 AKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 193 a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
+..+ +++.|+.+|++. ++.+++.||+.+. |++++ ++ +...+.|..+.+.|.+|+...+.
T Consensus 162 ~~~~-~~v~~~~vd~~~---~~~l~~~~~v~~~--Pt~~~--~G--~~~~~~G~~~~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 162 ALAN-DYITSKVIDASE---NQDLAEQFQVVGV--PKIVI--NK--GVAEFVGAQPENAFLGYIMAVYE 220 (229)
T ss_dssp HHHC-TTEEEEEEEGGG---CHHHHHHTTCCSS--SEEEE--GG--GTEEEESCCCHHHHHHHHHHHHH
T ss_pred HHHC-CCeEEEEEECCC---CHHHHHHcCCccc--CEEEE--CC--EEEEeeCCCCHHHHHHHHHHHhh
Confidence 9999 579999999987 5689999999988 99977 33 24457899999999999999875
No 86
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.60 E-value=3e-15 Score=118.99 Aligned_cols=103 Identities=25% Similarity=0.431 Sum_probs=88.2
Q ss_pred CCceEEEecccchhhhhc-CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCC-ccc--ccCCCCCCc
Q 013976 278 DGDVKIVVGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-NEH--HRAKSDGFP 353 (432)
Q Consensus 278 ~~~v~~l~~~~~~~~~~~-~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~-~~~--~~~~i~~~P 353 (432)
.+.+..++.++|.+.+.+ .+++++|.||++||++|+.+.|.+.+++..+.+ +.++.+|++. +.. .++++.++|
T Consensus 17 ~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~---~~~~~vd~~~~~~~~~~~~~v~~~P 93 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD---VIFLKLDCNQENKTLAKELGIRVVP 93 (124)
T ss_dssp TTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT---SEEEEEECSSTTHHHHHHHCCSSSS
T ss_pred CCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC---CEEEEEecCcchHHHHHHcCCCeee
Confidence 456899999999998864 578999999999999999999999999999864 8999999983 433 579999999
Q ss_pred eEEEEeCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 354 TILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 354 ~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
+++++++|+.+. .+.|.. .+.|.++|++..
T Consensus 94 t~~~~~~G~~~~---~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 94 TFKILKENSVVG---EVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp EEEEEETTEEEE---EEESSC-HHHHHHHHHHHT
T ss_pred EEEEEeCCcEEE---EEcCCC-HHHHHHHHHHhh
Confidence 999999997654 677764 899999998764
No 87
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.60 E-value=1.9e-15 Score=117.93 Aligned_cols=101 Identities=22% Similarity=0.427 Sum_probs=89.3
Q ss_pred CceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEE
Q 013976 279 GDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTIL 356 (432)
Q Consensus 279 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~ 356 (432)
+....++..+|++.+ +.+++++|+||++||++|+.+.|.|.+++..+. ++.|+.+|++.+.. .++++.++|+++
T Consensus 9 ~~~~~~~~~~f~~~~-~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~---~v~~~~vd~~~~~~~~~~~~v~~~Pt~~ 84 (112)
T 1syr_A 9 MVKIVTSQAEFDSII-SQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT---KMVFIKVDVDEVSEVTEKENITSMPTFK 84 (112)
T ss_dssp CCEEECSHHHHHHHH-HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTTHHHHHHTTCCSSSEEE
T ss_pred eEEEECCHHHHHHHH-ccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC---CCEEEEEECCCCHHHHHHcCCCcccEEE
Confidence 457788899999977 567899999999999999999999999999886 39999999998875 689999999999
Q ss_pred EEeCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 357 FFPAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 357 ~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
+|++|+.+. .+.|. +.+.|.+||++.+
T Consensus 85 ~~~~G~~~~---~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 85 VYKNGSSVD---TLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp EEETTEEEE---EEESC-CHHHHHHHHHTTC
T ss_pred EEECCcEEE---EEeCC-CHHHHHHHHHHhh
Confidence 999887654 68887 9999999998865
No 88
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.60 E-value=4.2e-15 Score=118.13 Aligned_cols=103 Identities=22% Similarity=0.390 Sum_probs=88.9
Q ss_pred CCceEEE-ecccchhhhhc---CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCC
Q 013976 278 DGDVKIV-VGNNFDEIVLD---ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDG 351 (432)
Q Consensus 278 ~~~v~~l-~~~~~~~~~~~---~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~ 351 (432)
.+.+..+ +.++|++.+.. .+++++|+||++||++|+.+.|.|.+++..+. ++.|+.+|++.+.. .+++|.+
T Consensus 15 ~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~---~v~~~~vd~d~~~~l~~~~~v~~ 91 (124)
T 1xfl_A 15 EGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP---NVLFLKVDTDELKSVASDWAIQA 91 (124)
T ss_dssp CSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS---SEEEEEEETTTSHHHHHHTTCCS
T ss_pred CCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CcEEEEEECccCHHHHHHcCCCc
Confidence 4567777 56889988754 47899999999999999999999999999986 49999999998765 6899999
Q ss_pred CceEEEEeCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 352 FPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 352 ~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
+|++++|++|+.+. .+.| .+.+.|.++|++.+
T Consensus 92 ~Pt~~~~~~G~~~~---~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 92 MPTFMFLKEGKILD---KVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp SSEEEEEETTEEEE---EEES-CCHHHHHHHHHHHC
T ss_pred cCEEEEEECCEEEE---EEeC-CCHHHHHHHHHHhc
Confidence 99999999887654 6777 58999999998865
No 89
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.60 E-value=2.3e-15 Score=117.31 Aligned_cols=102 Identities=12% Similarity=0.242 Sum_probs=83.9
Q ss_pred eEEEec-ccchhhhh--cCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceE
Q 013976 281 VKIVVG-NNFDEIVL--DESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTI 355 (432)
Q Consensus 281 v~~l~~-~~~~~~~~--~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i 355 (432)
|..++. ++|++.+. ..+++++|.||++||++|+.+.|.|.+++..+.. +++.|+.+|++.+.. ..+++.++|++
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 80 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSN-SNVSFLSIDADENSEISELFEISAVPYF 80 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGG-TTSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCC-CCEEEEEEecccCHHHHHHcCCCcccEE
Confidence 567887 89999774 2368999999999999999999999999998643 269999999998876 68999999999
Q ss_pred EEEeCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 356 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 356 ~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
++|++|+.+. .+.|. ..+.|.++|++++
T Consensus 81 ~~~~~G~~~~---~~~G~-~~~~l~~~l~~~~ 108 (112)
T 3d6i_A 81 IIIHKGTILK---ELSGA-DPKEYVSLLEDCK 108 (112)
T ss_dssp EEEETTEEEE---EECSC-CHHHHHHHHHHHH
T ss_pred EEEECCEEEE---EecCC-CHHHHHHHHHHHH
Confidence 9999887664 67776 4567999998765
No 90
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.60 E-value=2.2e-15 Score=118.44 Aligned_cols=100 Identities=19% Similarity=0.449 Sum_probs=87.1
Q ss_pred ceEEEec-ccchhhhhc-CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceE
Q 013976 280 DVKIVVG-NNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTI 355 (432)
Q Consensus 280 ~v~~l~~-~~~~~~~~~-~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i 355 (432)
.+..++. ++|++.+.+ .+++++|.||++||++|+.+.|.|.+++..+ ++.|+.+|++.+.. .++++.++|++
T Consensus 14 ~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~----~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 89 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY----DAIFVKVDVDKLEETARKYNISAMPTF 89 (117)
T ss_dssp EEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS----SSEEEEEETTTSHHHHHHTTCCSSSEE
T ss_pred eeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc----CcEEEEEECCccHHHHHHcCCCccceE
Confidence 3778888 899998754 6789999999999999999999999998877 48999999998876 68999999999
Q ss_pred EEEeCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 356 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 356 ~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
++|++|+.+. .+.| .+.+.|.++|++++
T Consensus 90 ~~~~~G~~~~---~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 90 IAIKNGEKVG---DVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp EEEETTEEEE---EEES-SCHHHHHHHHHHHC
T ss_pred EEEeCCcEEE---EEeC-CCHHHHHHHHHHhC
Confidence 9999887654 6778 68999999998763
No 91
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.60 E-value=6e-14 Score=125.37 Aligned_cols=217 Identities=13% Similarity=0.130 Sum_probs=156.4
Q ss_pred CceeecCCCchhhhc-cCCCcceEEEEEeC-cchhhhHHHHHHHHHhccC---ceEEEEEecCCcccccchhhhhCCCCC
Q 013976 151 PLVTIFTRENAPSVF-ESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKG---KLIFVYVQMDNEDVGKPVSEYFGITGE 225 (432)
Q Consensus 151 p~v~~l~~~~~~~~~-~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~---~i~f~~vd~~~~~~~~~l~~~~~i~~~ 225 (432)
..+..++.+++...+ ..++++++.||++| ++|+.+.+.|.++++++.+ .+.|+.+||+... ++.+|+.|+|.+.
T Consensus 12 ~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~-~~~l~~~~~v~~~ 90 (244)
T 3q6o_A 12 DPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEET-NSAVCRDFNIPGF 90 (244)
T ss_dssp SSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTT-THHHHHHTTCCSS
T ss_pred CCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchh-hHHHHHHcCCCcc
Confidence 357889999998754 55578889999999 9999999999999999987 7999999996544 6799999999998
Q ss_pred CCcEEEEEeCCC----CceecCCCCCCHHHHHHHHHHHhcCCcCccccCCCCCCCCCCceEEEecccchhhhhcCC-CcE
Q 013976 226 APKVLAYTGNDD----AKKHILDGELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDES-KDV 300 (432)
Q Consensus 226 ~~P~i~i~~~~~----~~~y~~~~~~~~~~i~~fi~~~~~g~l~~~~~se~~p~~~~~~v~~l~~~~~~~~~~~~~-~~~ 300 (432)
|+++++..+. +....+.| .+.+.|.+|+.+++..... ..|.. ...+..++..++.+++.... +.+
T Consensus 91 --Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~------~~p~~-~p~l~~~~~~~l~~~~~~~~~~~~ 160 (244)
T 3q6o_A 91 --PTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHD------TWPPA-CPPLEPAXLEEIDGFFARNNEEYL 160 (244)
T ss_dssp --SEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTT------SCCTT-SCCCSCCCHHHHHTHHHHCCCSEE
T ss_pred --CEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccc------cCCCC-CCCcccccHHHHHHHhhcCCCceE
Confidence 9999997643 22334455 7999999999999874331 12211 11233345567777664443 566
Q ss_pred EEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc-ccCCCCCCceEEEEeCCCcccCceeccC-CCCHHH
Q 013976 301 LLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH-HRAKSDGFPTILFFPAGNKSFDPINVDV-DRTVVA 378 (432)
Q Consensus 301 lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~-~~~~i~~~P~i~~~~~g~~~~~~~~y~g-~~~~~~ 378 (432)
.++|....|. ...+++..+.....+.+..++-..... .+|+|+++|++++|.++.+. ..+.. ..+.+.
T Consensus 161 al~f~~~~~~-------~~~~~~~d~~~~~~i~v~~~~~~~~~l~~~f~v~~~Pslvl~~~~g~~---~~~~~~~~~r~~ 230 (244)
T 3q6o_A 161 ALIFEXGGSY-------LAREVALDLSQHKGVAVRRVLNTEANVVRKFGVTDFPSCYLLFRNGSV---SRVPVLMESRSF 230 (244)
T ss_dssp EEEEECTTCC-------HHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCCSSEEEEEETTSCE---EECCCSSSSHHH
T ss_pred EEEEEECCcc-------hHHHHHHHhccCCceEEEEEeCchHHHHHHcCCCCCCeEEEEeCCCCe---EeeccccccHHH
Confidence 6777766543 345566667665679998888554444 78999999999999765543 24553 567788
Q ss_pred HHHHHHhcCC
Q 013976 379 LYKFLKKNAS 388 (432)
Q Consensus 379 l~~fi~~~~~ 388 (432)
+..+|+...+
T Consensus 231 ~~~~l~~~~~ 240 (244)
T 3q6o_A 231 YTAYLQRLSG 240 (244)
T ss_dssp HHHHHHTC--
T ss_pred HHHHHHhCCC
Confidence 8888877655
No 92
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.59 E-value=3.7e-15 Score=114.41 Aligned_cols=99 Identities=19% Similarity=0.497 Sum_probs=84.9
Q ss_pred EEEec-ccchhhhhc-CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEEE
Q 013976 282 KIVVG-NNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILF 357 (432)
Q Consensus 282 ~~l~~-~~~~~~~~~-~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~~ 357 (432)
..++. ++|++.+.+ .+++++|.||++||++|+.+.|.+.+++..+. ++.|+.+|++.+.. ..+++.++|++++
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 78 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP---EVEFAKVDVDQNEEAAAKYSVTAMPTFVF 78 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC---CCEEEEEeccCCHHHHHHcCCccccEEEE
Confidence 44555 788887754 57899999999999999999999999999885 59999999998875 6899999999999
Q ss_pred EeCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 358 FPAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 358 ~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
|++|+.+. .+.| .+.+.|.+||++++
T Consensus 79 ~~~g~~~~---~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 79 IKDGKEVD---RFSG-ANETKLRETITRHK 104 (104)
T ss_dssp EETTEEEE---EEES-SCHHHHHHHHHHHC
T ss_pred EeCCcEEE---EEeC-CCHHHHHHHHHhhC
Confidence 99887654 6778 68999999998763
No 93
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=99.59 E-value=5.2e-15 Score=116.40 Aligned_cols=106 Identities=14% Similarity=0.245 Sum_probs=95.4
Q ss_pred HHHhhCCCcee--eCCHHHHHHHhhcCCeEEEEEecCCCcchHHHHHHHhccCCCceEEEeCcHHHHhHcCCCCCCCCCe
Q 013976 40 IKKKIGPGIYN--ITTLDEAERVLTSETKVVLGYLNSLVGSESEVLADASRLEDDVNFYQTTNPDVAKIFHLDSKVNRPA 117 (432)
Q Consensus 40 l~~~~~~~~~~--i~~~~~l~~~~~~~~~~vv~f~~~~~~~~~~~f~~~a~~~~~~~F~~~~~~~~~~~~~~~~~~~~p~ 117 (432)
|+++++|++.. |++.+++++|++.++++|||||.+.+++.++.|.++|+..+++.|++++++++++++++.. |+
T Consensus 13 m~kq~gP~~~~~~i~s~~e~e~fi~~~~v~VVGfF~~~~~~~~~~F~~~A~~~~d~~F~~t~~~~v~~~~~v~~----~~ 88 (124)
T 2l4c_A 13 SSDGPGAAQEPTWLTDVPAAMEFIAATEVAVIGFFQDLEIPAVPILHSMVQKFPGVSFGISTDSEVLTHYNITG----NT 88 (124)
T ss_dssp SCCCSCCSCCCEECCSHHHHHHHHHTSSEEEEEECSCTTSTHHHHHHHHHHHCTTSEEEEECCHHHHHHTTCCS----SC
T ss_pred HHhccCCCCcceEcCCHHHHHHHHhcCCCEEEEEECCCCChhHHHHHHHHHhCCCceEEEEChHHHHHHcCCCC----Ce
Confidence 45788898855 9999999999999999999999999999999999999444999999999999999999985 99
Q ss_pred EEEEecCCCceecccCC----CCCHHHHHHHHHhcCC
Q 013976 118 LVMVKKETEKISYFADG----KFDKSTIADFVFSNKL 150 (432)
Q Consensus 118 i~l~~~~~~~~~~y~~g----~~~~~~l~~fi~~~~~ 150 (432)
|+|||++++....| .| +++.++|.+||..+++
T Consensus 89 vvlfkkfde~~~~~-~g~~~~~~~~~~L~~FI~~n~l 124 (124)
T 2l4c_A 89 ICLFRLVDNEQLNL-EDEDIESIDATKLSRFIEINSL 124 (124)
T ss_dssp EEEEETTTTEEEEE-CHHHHTTCCHHHHHHHHHHHCC
T ss_pred EEEEEcCCCCceee-cCcccCCCCHHHHHHHHHHhcC
Confidence 99999988888889 75 7999999999998763
No 94
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=2.3e-16 Score=127.94 Aligned_cols=104 Identities=20% Similarity=0.371 Sum_probs=87.3
Q ss_pred CceEEEecccchhhhhcCC-CcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCC-----
Q 013976 279 GDVKIVVGNNFDEIVLDES-KDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSD----- 350 (432)
Q Consensus 279 ~~v~~l~~~~~~~~~~~~~-~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~----- 350 (432)
+.|..++..+|++.+.... ++++|.||++||++|+.+.|.|.+++..+.+ .++.|+.+|++.+.. .+++|.
T Consensus 7 ~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~-~~v~~~~vd~~~~~~~~~~~~v~~~~~~ 85 (137)
T 2dj0_A 7 GYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNC-TGLNFGKVDVGRYTDVSTRYKVSTSPLT 85 (137)
T ss_dssp SCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCS-SSCEEEECCTTTCHHHHHHTTCCCCSSS
T ss_pred ceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CCeEEEEEeCccCHHHHHHccCcccCCc
Confidence 4588999999999886554 4899999999999999999999999999975 269999999998876 689998
Q ss_pred -CCceEEEEeCCCcccCceeccCCCCHHHHHHHHHhc
Q 013976 351 -GFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKN 386 (432)
Q Consensus 351 -~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~ 386 (432)
++|++++|++|+.+. ++.|..+.+.|.+||.++
T Consensus 86 ~~~Pt~~~~~~G~~~~---~~~G~~~~~~l~~~l~~~ 119 (137)
T 2dj0_A 86 KQLPTLILFQGGKEAM---RRPQIDKKGRAVSWTFSE 119 (137)
T ss_dssp SCSSEEEEESSSSEEE---EESCBCSSSCBCCCCCCH
T ss_pred CCCCEEEEEECCEEEE---EecCcCchHHHHHHHhcc
Confidence 999999999887654 677877766666665443
No 95
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.59 E-value=4.3e-15 Score=114.26 Aligned_cols=96 Identities=20% Similarity=0.409 Sum_probs=83.6
Q ss_pred ecccchhhhhc-CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEEEEeCC
Q 013976 285 VGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFFPAG 361 (432)
Q Consensus 285 ~~~~~~~~~~~-~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~~~~~g 361 (432)
+.++|++.+.+ .+++++|.||++||++|+.+.|.|.+++..+++ +.|+.+|++.+.. ..+++.++|++++|++|
T Consensus 7 ~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g 83 (105)
T 3m9j_A 7 SKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN---VIFLEVDVDDCQDVASESEVKSMPTFQFFKKG 83 (105)
T ss_dssp SHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT---SEEEEEETTTCHHHHHHTTCCBSSEEEEEETT
T ss_pred CHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC---eEEEEEEhhhhHHHHHHcCCCcCcEEEEEECC
Confidence 34677777643 578999999999999999999999999999865 9999999998876 68999999999999998
Q ss_pred CcccCceeccCCCCHHHHHHHHHhcC
Q 013976 362 NKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 362 ~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
+.+. .+.|. +.+.|.++|++++
T Consensus 84 ~~~~---~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 84 QKVG---EFSGA-NKEKLEATINELV 105 (105)
T ss_dssp EEEE---EEESS-CHHHHHHHHHHHC
T ss_pred eEEE---EEeCC-CHHHHHHHHHHhC
Confidence 8764 78887 9999999998763
No 96
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.58 E-value=8.5e-15 Score=130.94 Aligned_cols=113 Identities=26% Similarity=0.440 Sum_probs=94.5
Q ss_pred CCceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcC-CCCEEEEEEeCCC--ccc--ccCCCCCC
Q 013976 278 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRG-VDSIVIAKMDGTT--NEH--HRAKSDGF 352 (432)
Q Consensus 278 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~-~~~~~~~~id~~~--~~~--~~~~i~~~ 352 (432)
.+.|..|++.+|++.+.+.+++++|.|||+||++|+.+.|.|.++++.+.+ ...+.|+.+||+. +.. .+++|.++
T Consensus 11 ~~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~ 90 (244)
T 3q6o_A 11 SDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGF 90 (244)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSS
T ss_pred CCCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCcc
Confidence 567999999999998878789999999999999999999999999999986 2369999999954 433 68999999
Q ss_pred ceEEEEeCCCccc--CceeccCCCCHHHHHHHHHhcCCCCC
Q 013976 353 PTILFFPAGNKSF--DPINVDVDRTVVALYKFLKKNASIPF 391 (432)
Q Consensus 353 P~i~~~~~g~~~~--~~~~y~g~~~~~~l~~fi~~~~~~~~ 391 (432)
|++++|.+|.+.. ..+.+.| .+.+.|.++|.+++....
T Consensus 91 Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~ 130 (244)
T 3q6o_A 91 PTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHH 130 (244)
T ss_dssp SEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCT
T ss_pred CEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhcc
Confidence 9999999876531 2234555 799999999999886543
No 97
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.58 E-value=1.2e-15 Score=123.73 Aligned_cols=106 Identities=14% Similarity=0.142 Sum_probs=77.0
Q ss_pred ceEEEecccchhhhhcCCCcEEEEEeCCC--ChhhhhhHHHHHHHHHHhcCCCCEE--EEEEeCCCccc--ccCCCCCCc
Q 013976 280 DVKIVVGNNFDEIVLDESKDVLLEIYAPW--CGHCQAFEPTYNKLAKHLRGVDSIV--IAKMDGTTNEH--HRAKSDGFP 353 (432)
Q Consensus 280 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~--c~~c~~~~~~~~~la~~~~~~~~~~--~~~id~~~~~~--~~~~i~~~P 353 (432)
.+..++.++|++.+ ..++.++|+|+++| |++|+.+.|.|+++++.+ + ++. |+.||++.+.. .+|+|.++|
T Consensus 18 ~~~~l~~~~f~~~i-~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~--~v~~~~~~Vd~d~~~~la~~~~V~~iP 93 (142)
T 2es7_A 18 GWQPVEASTVDDWI-KRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P--QFDWQVAVADLEQSEAIGDRFNVRRFP 93 (142)
T ss_dssp TCEECCCC---------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T--TSCCEEEEECHHHHHHHHHTTTCCSSS
T ss_pred cCcccccccHHHHH-HhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c--ccceeEEEEECCCCHHHHHhcCCCcCC
Confidence 47788999999987 44567888999887 999999999999999998 5 578 99999998776 689999999
Q ss_pred eEEEEeCCCcccCceeccCCCCHHHHHHHHHhcCCCCCc
Q 013976 354 TILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPFK 392 (432)
Q Consensus 354 ~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~~~ 392 (432)
|+++|++|+.+. ++.|..+.+.|.+||++.+..+..
T Consensus 94 T~~~fk~G~~v~---~~~G~~~~~~l~~~i~~~l~~~~~ 129 (142)
T 2es7_A 94 ATLVFTDGKLRG---ALSGIHPWAELLTLMRSIVDTPAA 129 (142)
T ss_dssp EEEEESCC-------CEESCCCHHHHHHHHHHHHC----
T ss_pred eEEEEeCCEEEE---EEeCCCCHHHHHHHHHHHhccccc
Confidence 999999998765 789999999999999999865443
No 98
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.58 E-value=7.1e-15 Score=129.86 Aligned_cols=104 Identities=21% Similarity=0.352 Sum_probs=90.6
Q ss_pred CCceEEEecccchhhhhcCCCcEEEEEe--CCCChhhhhhHHHHHHHHHHhcC-CCCEEEEEEeCCC-----ccc--ccC
Q 013976 278 DGDVKIVVGNNFDEIVLDESKDVLLEIY--APWCGHCQAFEPTYNKLAKHLRG-VDSIVIAKMDGTT-----NEH--HRA 347 (432)
Q Consensus 278 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~--~~~c~~c~~~~~~~~~la~~~~~-~~~~~~~~id~~~-----~~~--~~~ 347 (432)
.+.|..|+..+|++.+ +.++++||.|| ||||+ +.|.|.++|..+.+ .+++.|+.|||+. +.. .++
T Consensus 15 ~~~v~~Lt~~nF~~vi-~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~ 89 (248)
T 2c0g_A 15 CTGCVDLDELSFEKTV-ERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRY 89 (248)
T ss_dssp CTTCEECCTTTHHHHH-TTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHT
T ss_pred CCCcEECCHHHHHHHH-hcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHh
Confidence 4568899999999954 77789999999 99998 99999999999965 4579999999998 544 689
Q ss_pred CCC--CCceEEEEeCCCcccCceec--cCCCCHHHHHHHHHhcCC
Q 013976 348 KSD--GFPTILFFPAGNKSFDPINV--DVDRTVVALYKFLKKNAS 388 (432)
Q Consensus 348 ~i~--~~P~i~~~~~g~~~~~~~~y--~g~~~~~~l~~fi~~~~~ 388 (432)
+|. ++||+++|+ |... .+..| .|.++.+.|.+||+++++
T Consensus 90 ~V~~~~~PTl~~F~-G~~~-~~~~y~~~G~~~~~~L~~fi~~~~~ 132 (248)
T 2c0g_A 90 KVDDKNFPSIFLFK-GNAD-EYVQLPSHVDVTLDNLKAFVSANTP 132 (248)
T ss_dssp TCCTTSCCEEEEES-SSSS-SEEECCTTSCCCHHHHHHHHHHHSS
T ss_pred CCCcCCCCeEEEEe-CCcC-cceeecccCCCCHHHHHHHHHHhhc
Confidence 999 999999999 8732 46688 999999999999999986
No 99
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.57 E-value=1e-13 Score=136.21 Aligned_cols=220 Identities=13% Similarity=0.131 Sum_probs=159.9
Q ss_pred ceeecCCCchhhhc-cCCCcceEEEEEeC-cchhhhHHHHHHHHHhccC---ceEEEEEecCCcccccchhhhhCCCCCC
Q 013976 152 LVTIFTRENAPSVF-ESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKG---KLIFVYVQMDNEDVGKPVSEYFGITGEA 226 (432)
Q Consensus 152 ~v~~l~~~~~~~~~-~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~---~i~f~~vd~~~~~~~~~l~~~~~i~~~~ 226 (432)
.|.+++.+++...+ ..+++++|.||++| ++|+.+.+.|.++|+++.+ .+.|+.|||+.+. ++.+++.|||.+.
T Consensus 13 ~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~-~~~l~~~~~V~~~- 90 (519)
T 3t58_A 13 PLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEET-NSAVCREFNIAGF- 90 (519)
T ss_dssp SSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGG-GHHHHHHTTCCSB-
T ss_pred CcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccc-cHHHHHHcCCccc-
Confidence 47889999998754 55678889999999 9999999999999999987 7999999997544 6799999999998
Q ss_pred CcEEEEEeCCCC---ceecCCCCCCHHHHHHHHHHHhcCCcCccccCCCCCCCCCCceEEEecccchhhhhcCC-CcEEE
Q 013976 227 PKVLAYTGNDDA---KKHILDGELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDES-KDVLL 302 (432)
Q Consensus 227 ~P~i~i~~~~~~---~~y~~~~~~~~~~i~~fi~~~~~g~l~~~~~se~~p~~~~~~v~~l~~~~~~~~~~~~~-~~~lv 302 (432)
|+++++..+.. ....+.|..+.+.|.+|+.+++..... ..|.. ...+..++..++++++.... +.+++
T Consensus 91 -PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~------~~P~~-~p~l~~it~~~l~~~l~~~~~~~val 162 (519)
T 3t58_A 91 -PTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRD------TWPPA-CPPLEPAKLNDIDGFFTRNKADYLAL 162 (519)
T ss_dssp -SEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCS------CCCTT-CCCCSBCCHHHHTTGGGSCCCSEEEE
T ss_pred -CEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccc------cCCCC-CCccCcCCHHHHHHHhccCCCCeEEE
Confidence 99999985321 233456779999999999999864321 11111 12344456677877765443 56777
Q ss_pred EEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc-ccCCCCCCceEEEEeCCCcccCceeccC-CCCHHHHH
Q 013976 303 EIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH-HRAKSDGFPTILFFPAGNKSFDPINVDV-DRTVVALY 380 (432)
Q Consensus 303 ~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~-~~~~i~~~P~i~~~~~g~~~~~~~~y~g-~~~~~~l~ 380 (432)
+|.... .....+++..+.....+.+..++...... .+|+|+.+|+++++.++.+.. .+.. ..+...+.
T Consensus 163 lF~~~~-------s~~~~~~~ldl~~~~~v~v~~v~~~~~~l~~kfgV~~~Pslvl~~~nGk~~---~~~v~~~~r~~~~ 232 (519)
T 3t58_A 163 VFERED-------SYLGREVTLDLSQYHAVAVRRVLNTESDLVNKFGVTDFPSCYLLLRNGSVS---RVPVLVESRSFYT 232 (519)
T ss_dssp EEECTT-------CCHHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCCSSEEEEEETTSCEE---ECCCSSCSHHHHH
T ss_pred EecCCc-------hHHHHHHHHHhhccCCeeEEEecCchHHHHHHcCCCCCCeEEEEeCCCcee---ecccccccHHHHH
Confidence 777654 23567788888876689998887554444 789999999999997766531 2332 33446677
Q ss_pred HHHHhcCCCCC
Q 013976 381 KFLKKNASIPF 391 (432)
Q Consensus 381 ~fi~~~~~~~~ 391 (432)
.+|+.......
T Consensus 233 ~~l~~l~~~~~ 243 (519)
T 3t58_A 233 SYLRGLPGLTR 243 (519)
T ss_dssp HHHTTSTTCCC
T ss_pred HHHHHccCCCC
Confidence 78776555443
No 100
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.57 E-value=2.7e-15 Score=117.32 Aligned_cols=99 Identities=19% Similarity=0.407 Sum_probs=82.9
Q ss_pred ceEEEec-ccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEE
Q 013976 280 DVKIVVG-NNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTIL 356 (432)
Q Consensus 280 ~v~~l~~-~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~ 356 (432)
.+..++. +.|++ +.+.+++++|.||++||++|+.+.|.|.+++..+.+ +.|+.+|++.+.. .++++.++|+++
T Consensus 13 ~~~~~~~~~~~~~-~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~---v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 88 (114)
T 2oe3_A 13 SITKLTNLTEFRN-LIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD---VRFVKCDVDESPDIAKECEVTAMPTFV 88 (114)
T ss_dssp GSCBCCSHHHHHH-HHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT---SEEEEEETTTCHHHHHHTTCCSBSEEE
T ss_pred heeecCCHHHHHH-HHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC---CEEEEEECCCCHHHHHHCCCCcccEEE
Confidence 3455555 44555 446778999999999999999999999999999865 9999999998866 689999999999
Q ss_pred EEeCCCcccCceeccCCCCHHHHHHHHHhc
Q 013976 357 FFPAGNKSFDPINVDVDRTVVALYKFLKKN 386 (432)
Q Consensus 357 ~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~ 386 (432)
+|++|+.+. .+.|.. .+.|.++|+++
T Consensus 89 ~~~~G~~~~---~~~G~~-~~~l~~~l~~~ 114 (114)
T 2oe3_A 89 LGKDGQLIG---KIIGAN-PTALEKGIKDL 114 (114)
T ss_dssp EEETTEEEE---EEESSC-HHHHHHHHHTC
T ss_pred EEeCCeEEE---EEeCCC-HHHHHHHHHhC
Confidence 999887654 788877 99999999763
No 101
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.57 E-value=1.1e-14 Score=118.52 Aligned_cols=102 Identities=15% Similarity=0.188 Sum_probs=83.4
Q ss_pred ecccchhhhhc-CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEEEEeCC
Q 013976 285 VGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFFPAG 361 (432)
Q Consensus 285 ~~~~~~~~~~~-~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~~~~~g 361 (432)
+.++|++.+.+ .+++++|.|||+||++|+.+.|.|.+++..+.+ ++.|+.+|++.+.. .+++|.++|++++|++|
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~G 87 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKN--FAVIYLVDITEVPDFNKMYELYDPCTVMFFFRN 87 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTT--TEEEEEEETTTCCTTTTSSCSCSSCEEEEEETT
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC--CeEEEEEccccCHHHHHHcCCCCCCEEEEEECC
Confidence 45788877765 678999999999999999999999999999976 69999999998876 68999999999999988
Q ss_pred CcccC------ceeccCCC-CHHHHHHHHHhcCC
Q 013976 362 NKSFD------PINVDVDR-TVVALYKFLKKNAS 388 (432)
Q Consensus 362 ~~~~~------~~~y~g~~-~~~~l~~fi~~~~~ 388 (432)
+.+.. ...+.|.. +.+.+.++|++...
T Consensus 88 ~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~~ 121 (142)
T 1qgv_A 88 KHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYR 121 (142)
T ss_dssp EEEEEECC------CCSCCSCHHHHHHHHHHHHH
T ss_pred cEEEEecCCCCcceeeeecCcHHHHHHHHHHHHH
Confidence 76520 01244544 48999999988764
No 102
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.57 E-value=1.5e-14 Score=119.55 Aligned_cols=108 Identities=22% Similarity=0.353 Sum_probs=90.5
Q ss_pred CCceEEEe-cccchhhhhcC-CCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCc
Q 013976 278 DGDVKIVV-GNNFDEIVLDE-SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFP 353 (432)
Q Consensus 278 ~~~v~~l~-~~~~~~~~~~~-~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P 353 (432)
.+.+..++ .++|++.+.+. +++++|.||++||++|+.+.|.|.+++..+. ++.|+.+|++.+.. .+++|.++|
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~P 87 (153)
T 2wz9_A 11 VAAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP---QVSFVKLEAEGVPEVSEKYEISSVP 87 (153)
T ss_dssp -CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHHTTCCSSS
T ss_pred cCCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC---CeEEEEEECCCCHHHHHHcCCCCCC
Confidence 34577787 48898877443 7899999999999999999999999999974 59999999998876 689999999
Q ss_pred eEEEEeCCCcccCceeccCCCCHHHHHHHHHhcCCCCCc
Q 013976 354 TILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPFK 392 (432)
Q Consensus 354 ~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~~~ 392 (432)
++++|.+|+.+. .+.| .+.+.|.+||++.+.....
T Consensus 88 t~~~~~~G~~~~---~~~G-~~~~~l~~~i~~~l~~~~~ 122 (153)
T 2wz9_A 88 TFLFFKNSQKID---RLDG-AHAPELTKKVQRHASSGSF 122 (153)
T ss_dssp EEEEEETTEEEE---EEES-SCHHHHHHHHHHHSCTTSS
T ss_pred EEEEEECCEEEE---EEeC-CCHHHHHHHHHHHhccccC
Confidence 999999887653 5667 5788999999999876544
No 103
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.56 E-value=3.2e-15 Score=116.15 Aligned_cols=100 Identities=14% Similarity=0.226 Sum_probs=84.2
Q ss_pred EEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEEEEe
Q 013976 282 KIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFFP 359 (432)
Q Consensus 282 ~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~~~~ 359 (432)
..++.++| +.+ ..+++++|.||++||++|+.+.|.|.+++..+. ++.|+.+|++.+.. .++++.++|++++|+
T Consensus 6 ~~~~~~~f-~~~-~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~ 80 (110)
T 2l6c_A 6 DITTEAGM-AHF-EGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP---QVAISSVDSEARPELMKELGFERVPTLVFIR 80 (110)
T ss_dssp BCGGGCSH-HHH-TTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT---TSCEEEEEGGGCHHHHHHTTCCSSCEEEEEE
T ss_pred ecCCHHHH-HHH-HcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC---CcEEEEEcCcCCHHHHHHcCCcccCEEEEEE
Confidence 44667889 545 456899999999999999999999999998775 58999999987766 689999999999999
Q ss_pred CCCcccCceeccCCCCHHHHHHHHHhcCCC
Q 013976 360 AGNKSFDPINVDVDRTVVALYKFLKKNASI 389 (432)
Q Consensus 360 ~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~ 389 (432)
+|+.+. ++.|..+.+.|.++|.+....
T Consensus 81 ~G~~v~---~~~G~~~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 81 DGKVAK---VFSGIMNPRELQALYASIHHH 107 (110)
T ss_dssp SSSEEE---EEESCCCHHHHHHHHHTC---
T ss_pred CCEEEE---EEcCCCCHHHHHHHHHHHhhh
Confidence 988764 788999999999999988653
No 104
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.55 E-value=1.2e-14 Score=115.96 Aligned_cols=94 Identities=15% Similarity=0.144 Sum_probs=81.6
Q ss_pred hcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEe--CCCccc--ccCCCCCCceEEEEe-CCCcccCce
Q 013976 294 LDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMD--GTTNEH--HRAKSDGFPTILFFP-AGNKSFDPI 368 (432)
Q Consensus 294 ~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id--~~~~~~--~~~~i~~~P~i~~~~-~g~~~~~~~ 368 (432)
...+++++|.||++||++|+.+.|.|.+++..++. ++.|+.+| ++.+.. ..+++.++|++++|. +|+.+.
T Consensus 23 ~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~~--- 97 (126)
T 2l57_A 23 AKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREG--KFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKFY--- 97 (126)
T ss_dssp CCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSS--SCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEEE---
T ss_pred HhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcC--CeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEEE---
Confidence 35568999999999999999999999999999974 79999999 776655 689999999999998 776553
Q ss_pred eccCCCCHHHHHHHHHhcCCCCCc
Q 013976 369 NVDVDRTVVALYKFLKKNASIPFK 392 (432)
Q Consensus 369 ~y~g~~~~~~l~~fi~~~~~~~~~ 392 (432)
.+.|..+.+.|.++|++++.....
T Consensus 98 ~~~G~~~~~~l~~~l~~~~~~~~~ 121 (126)
T 2l57_A 98 VHQGLMRKNNIETILNSLGVKEGH 121 (126)
T ss_dssp EEESCCCHHHHHHHHHHHCCCCCC
T ss_pred EecCCCCHHHHHHHHHHHhccccc
Confidence 688999999999999999876553
No 105
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.55 E-value=5.7e-15 Score=116.84 Aligned_cols=103 Identities=22% Similarity=0.502 Sum_probs=88.1
Q ss_pred CceEEEec-ccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceE
Q 013976 279 GDVKIVVG-NNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTI 355 (432)
Q Consensus 279 ~~v~~l~~-~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i 355 (432)
+.+..++. ++|++.+ ..+++++|+||++||++|+.+.|.|.+++..+.+. ++.|+.+|++.+.. ..+++.++|++
T Consensus 15 ~~~~~i~~~~~f~~~l-~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~-~v~~~~vd~d~~~~~~~~~~v~~~Pt~ 92 (121)
T 2j23_A 15 GSVQVISSYDQFKQVT-GGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGD-KVGFYKVDVDEQSQIAQEVGIRAMPTF 92 (121)
T ss_dssp CCEEECCSHHHHHHHH-SSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHH-HSEEEEEETTTCHHHHHHHTCCSSSEE
T ss_pred cceEEcCCHHHHHHHH-cCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCC-cEEEEEEECcCCHHHHHHcCCCcccEE
Confidence 34666666 8888877 67789999999999999999999999999887752 49999999998876 68999999999
Q ss_pred EEEeCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 356 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 356 ~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
++|++|+.+. .+.|. +.+.|.+||++.+
T Consensus 93 ~~~~~G~~~~---~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 93 VFFKNGQKID---TVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp EEEETTEEEE---EEESS-CHHHHHHHHHHHT
T ss_pred EEEECCeEEe---eEcCC-CHHHHHHHHHHhh
Confidence 9999887654 67887 9999999999865
No 106
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.55 E-value=2e-15 Score=122.01 Aligned_cols=103 Identities=17% Similarity=0.289 Sum_probs=87.3
Q ss_pred CCceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeC---------CCccc--cc
Q 013976 278 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDG---------TTNEH--HR 346 (432)
Q Consensus 278 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~---------~~~~~--~~ 346 (432)
++.+..++..+|++.+.. +++|.||++||++|+.+.|.|.+++..++ +.|+.+|+ +.+.. .+
T Consensus 15 ~~~v~~l~~~~~~~~~~~---~vlv~F~a~wC~~C~~~~p~l~~l~~~~~----v~~~~vd~~~~~~~~~~d~~~~l~~~ 87 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQG---DAILAVYSKTCPHCHRDWPQLIQASKEVD----VPIVMFIWGSLIGERELSAARLEMNK 87 (135)
T ss_dssp TTEEEECCHHHHHHHHTS---SEEEEEEETTCHHHHHHHHHHHHHHTTCC----SCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred cCceeecCHHHHHHHhCC---cEEEEEECCcCHhhhHhChhHHHHHHHCC----CEEEEEECCCchhhhhhhhhHHHHHH
Confidence 466888999999998733 99999999999999999999999988774 88899998 33333 57
Q ss_pred CCCCCCceEEEEeCCCcccCceeccCCCCHHHHHHHHHhcCCCC
Q 013976 347 AKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIP 390 (432)
Q Consensus 347 ~~i~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~ 390 (432)
++|.++||+++|++|+.+. .+.|..+.+.+.++++++.+..
T Consensus 88 ~~v~~~Pt~~~~~~G~~v~---~~~G~~~~~~~~~~i~~~~~~~ 128 (135)
T 3emx_A 88 AGVEGTPTLVFYKEGRIVD---KLVGATPWSLKVEKAREIYGGE 128 (135)
T ss_dssp HTCCSSSEEEEEETTEEEE---EEESCCCHHHHHHHHHHHC---
T ss_pred cCCceeCeEEEEcCCEEEE---EEeCCCCHHHHHHHHHHHhCCC
Confidence 8999999999999988765 8899999999999999988653
No 107
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.31 E-value=4.9e-16 Score=119.72 Aligned_cols=101 Identities=30% Similarity=0.534 Sum_probs=89.5
Q ss_pred eEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEEEE
Q 013976 281 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFF 358 (432)
Q Consensus 281 v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~~~ 358 (432)
+..++.++|.+.+...+++++|.||++||++|+.+.+.+.+++..+.+ ++.++.+|++.+.. ..+++.++|++++|
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 80 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG--KVKVVKVNVDENPNTAAQYGIRSIPTLLLF 80 (106)
Confidence 567888999987777789999999999999999999999999999986 69999999988776 68999999999999
Q ss_pred eCCCcccCceeccCCCCHHHHHHHHHhc
Q 013976 359 PAGNKSFDPINVDVDRTVVALYKFLKKN 386 (432)
Q Consensus 359 ~~g~~~~~~~~y~g~~~~~~l~~fi~~~ 386 (432)
++|+.+. .+.|..+.+.|.+||++.
T Consensus 81 ~~g~~~~---~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 81 KNGQVVD---RLVGAQPKEALKERIDKH 105 (106)
Confidence 8887654 788989999999999865
No 108
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.54 E-value=1.1e-14 Score=114.68 Aligned_cols=104 Identities=15% Similarity=0.233 Sum_probs=84.9
Q ss_pred ceEEE--ecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceE
Q 013976 280 DVKIV--VGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTI 355 (432)
Q Consensus 280 ~v~~l--~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i 355 (432)
.+..+ +..+|.+.+.+.+++++|.||++||++|+.+.|.|.+++..+ . ++.|+.+|++.+.. .+++|.++|++
T Consensus 4 ~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~--~v~~~~vd~~~~~~~~~~~~i~~~Pt~ 80 (118)
T 2f51_A 4 PIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-K--DVTFIKVDVDKNGNAADAYGVSSIPAL 80 (118)
T ss_dssp CSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-T--TSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-C--CeEEEEEECCCCHHHHHhcCCCCCCEE
Confidence 35667 457888767667899999999999999999999999999998 3 69999999998876 68999999999
Q ss_pred EEEeC----CCcccCceeccCCCCHHHHHHHHHhcCCCC
Q 013976 356 LFFPA----GNKSFDPINVDVDRTVVALYKFLKKNASIP 390 (432)
Q Consensus 356 ~~~~~----g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~ 390 (432)
++|.+ |+.+. ++.|.. .+.|.+.|.++....
T Consensus 81 ~~~~~~~~~G~~~~---~~~G~~-~~~l~~~~~~~~~~~ 115 (118)
T 2f51_A 81 FFVKKEGNEIKTLD---QFVGAD-VSRIKADIEKFKHHH 115 (118)
T ss_dssp EEEEEETTEEEEEE---EEESCC-HHHHHHHHHHHC---
T ss_pred EEEeCCCCcceEEE---eecCCC-HHHHHHHHHHhhhcc
Confidence 99987 65543 677754 556999999887543
No 109
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.54 E-value=8.1e-15 Score=114.36 Aligned_cols=102 Identities=21% Similarity=0.374 Sum_probs=86.8
Q ss_pred CceEEE-ecccchhhhhc---CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCC
Q 013976 279 GDVKIV-VGNNFDEIVLD---ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGF 352 (432)
Q Consensus 279 ~~v~~l-~~~~~~~~~~~---~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~ 352 (432)
+.+..+ +.++|++.+.. .+++++|+||++||++|+.+.+.|.+++..+. ++.|+.+|++.+.. ..+++.++
T Consensus 4 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~v~~~~v~~~~~~~~~~~~~v~~~ 80 (113)
T 1ti3_A 4 GQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP---NVTFLKVDVDELKAVAEEWNVEAM 80 (113)
T ss_dssp CCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS---SEEEEEEETTTCHHHHHHHHCSST
T ss_pred CceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC---CcEEEEEEccccHHHHHhCCCCcc
Confidence 456677 56889988754 47899999999999999999999999999986 59999999998765 68999999
Q ss_pred ceEEEEeCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 353 PTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 353 P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
|++++|++|+.+. .+.| .+.+.|.++|++++
T Consensus 81 Pt~~~~~~G~~~~---~~~g-~~~~~l~~~l~~~~ 111 (113)
T 1ti3_A 81 PTFIFLKDGKLVD---KTVG-ADKDGLPTLVAKHA 111 (113)
T ss_dssp TEEEEEETTEEEE---EEEC-CCTTHHHHHHHHHH
T ss_pred cEEEEEeCCEEEE---EEec-CCHHHHHHHHHHhh
Confidence 9999999887654 5677 68899999998865
No 110
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.54 E-value=1.7e-14 Score=117.14 Aligned_cols=105 Identities=20% Similarity=0.333 Sum_probs=89.4
Q ss_pred CCceEEEe-cccchhhhh---cCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCC
Q 013976 278 DGDVKIVV-GNNFDEIVL---DESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDG 351 (432)
Q Consensus 278 ~~~v~~l~-~~~~~~~~~---~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~ 351 (432)
.+.+..++ .++|++.+. ..+++++|.||++||++|+.+.|.|.+++..+. ++.|+.+|++.+.. ..++|.+
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~---~v~~~~v~~~~~~~~~~~~~v~~ 99 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP---SLMFLVIDVDELSDFSASWEIKA 99 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHHTTCCE
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CCEEEEEeCcccHHHHHHcCCCc
Confidence 44566665 689998774 347899999999999999999999999999984 49999999998876 6899999
Q ss_pred CceEEEEeCCCcccCceeccCCCCHHHHHHHHHhcCCC
Q 013976 352 FPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASI 389 (432)
Q Consensus 352 ~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~ 389 (432)
+|+++++++|+.+. .+.|. +.+.|.++|.+.+..
T Consensus 100 ~Pt~~~~~~G~~~~---~~~G~-~~~~l~~~l~~~~~~ 133 (139)
T 3d22_A 100 TPTFFFLRDGQQVD---KLVGA-NKPELHKKITAILDS 133 (139)
T ss_dssp ESEEEEEETTEEEE---EEESC-CHHHHHHHHHHHHHT
T ss_pred ccEEEEEcCCeEEE---EEeCC-CHHHHHHHHHHHhcc
Confidence 99999999887654 67777 899999999988754
No 111
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.53 E-value=1.6e-14 Score=113.57 Aligned_cols=103 Identities=22% Similarity=0.397 Sum_probs=87.8
Q ss_pred CceEEE-ecccchhhhhc---CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCC
Q 013976 279 GDVKIV-VGNNFDEIVLD---ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGF 352 (432)
Q Consensus 279 ~~v~~l-~~~~~~~~~~~---~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~ 352 (432)
+.+..+ +.++|++.+.. .+++++|.||++||++|+.+.|.|.+++..+. ++.|+.+|++.+.. ..+++.++
T Consensus 6 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~ 82 (118)
T 2vm1_A 6 GAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP---GAIFLKVDVDELKDVAEAYNVEAM 82 (118)
T ss_dssp CCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHHTTCCSB
T ss_pred CceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC---CcEEEEEEcccCHHHHHHcCCCcC
Confidence 446666 46889887754 47899999999999999999999999999986 49999999998765 68999999
Q ss_pred ceEEEEeCCCcccCceeccCCCCHHHHHHHHHhcCC
Q 013976 353 PTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 388 (432)
Q Consensus 353 P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 388 (432)
|++++|++|+.+. .+.| .+.+.|.++|.+++.
T Consensus 83 Pt~~~~~~g~~~~---~~~g-~~~~~l~~~l~~~~~ 114 (118)
T 2vm1_A 83 PTFLFIKDGEKVD---SVVG-GRKDDIHTKIVALMG 114 (118)
T ss_dssp SEEEEEETTEEEE---EEES-CCHHHHHHHHHHHHC
T ss_pred cEEEEEeCCeEEE---EecC-CCHHHHHHHHHHHhc
Confidence 9999999887654 6777 689999999998865
No 112
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.53 E-value=4.5e-14 Score=124.35 Aligned_cols=103 Identities=20% Similarity=0.350 Sum_probs=89.3
Q ss_pred CceEEEecccchhhhhcCCCcEEEEEeC--CCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCC-----ccc--ccCCC
Q 013976 279 GDVKIVVGNNFDEIVLDESKDVLLEIYA--PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-----NEH--HRAKS 349 (432)
Q Consensus 279 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~--~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~-----~~~--~~~~i 349 (432)
..|..|+..+|++.+ +.++++||.||+ |||+ +.|.|.++|..+.+.+++.|+.|||++ +.. .+++|
T Consensus 5 ~~v~~Lt~~nF~~~i-~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V 79 (240)
T 2qc7_A 5 KGALPLDTVTFYKVI-PKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKL 79 (240)
T ss_dssp TTCEECCTTHHHHHG-GGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTC
T ss_pred CCceECCHHHHHHHH-cCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCC
Confidence 457889999999965 667899999999 9999 999999999999865579999999654 443 68999
Q ss_pred C--CCceEEEEeCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 350 D--GFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 350 ~--~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
. ++||+++|++|... .+..|.|.++.+.|.+||++++
T Consensus 80 ~~~~~PTl~~f~~G~~~-~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 80 DKESYPVFYLFRDGDFE-NPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp CGGGCSEEEEEETTCSS-CCEECCSCSCHHHHHHHHHHTT
T ss_pred CCCCCCEEEEEeCCCcC-cceeecCCCCHHHHHHHHHHhc
Confidence 9 99999999999721 3568999999999999999997
No 113
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.52 E-value=1.2e-14 Score=114.36 Aligned_cols=97 Identities=13% Similarity=0.214 Sum_probs=79.8
Q ss_pred eEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--------ccCCCCCC
Q 013976 281 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--------HRAKSDGF 352 (432)
Q Consensus 281 v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--------~~~~i~~~ 352 (432)
+..++.++|.+.+ ..+++++|+||++||++|+.+.|.|.+++..+.. .+.++ |++.... .+++|.++
T Consensus 14 ~~~~~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~--~v~~~--~~~~~~~~~~~~~~~~~~~i~~~ 88 (118)
T 1zma_A 14 LEVTTVVRAQEAL-DKKETATFFIGRKTCPYCRKFAGTLSGVVAETKA--HIYFI--NSEEPSQLNDLQAFRSRYGIPTV 88 (118)
T ss_dssp SEECCHHHHHHHH-HTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC--CCEEE--ETTCGGGHHHHHHHHHHHTCCSS
T ss_pred hhcCCHHHHHHHH-hCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC--eEEEE--ECCCcCcHHHHHHHHHHcCCCCC
Confidence 6778889999876 5578999999999999999999999999998864 45555 4443321 46899999
Q ss_pred ceEEEEeCCCcccCceeccCCCCHHHHHHHHHh
Q 013976 353 PTILFFPAGNKSFDPINVDVDRTVVALYKFLKK 385 (432)
Q Consensus 353 P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~ 385 (432)
|++++|++|+.+. ++.|..+.+.|.+||++
T Consensus 89 Pt~~~~~~G~~~~---~~~G~~~~~~l~~~l~k 118 (118)
T 1zma_A 89 PGFVHITDGQINV---RCDSSMSAQEIKDFAGL 118 (118)
T ss_dssp CEEEEEETTEEEE---ECCTTCCHHHHHHHHTC
T ss_pred CeEEEEECCEEEE---EecCCCCHHHHHHHhhC
Confidence 9999999887654 78999999999999863
No 114
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.50 E-value=1.7e-14 Score=116.10 Aligned_cols=104 Identities=11% Similarity=0.241 Sum_probs=85.8
Q ss_pred CCceEEEec-ccchhhhhcC-CCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCc
Q 013976 278 DGDVKIVVG-NNFDEIVLDE-SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFP 353 (432)
Q Consensus 278 ~~~v~~l~~-~~~~~~~~~~-~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P 353 (432)
.+.+..++. ++|++.+... ++++||.||++||++|+.+.|.|.+++..+ ++.|+.+|++.+.. .+++|.++|
T Consensus 19 ~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~----~v~~~~vd~~~~~~l~~~~~v~~~P 94 (133)
T 3cxg_A 19 QSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY----YVTLVDIDVDIHPKLNDQHNIKALP 94 (133)
T ss_dssp TEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE----ECEEEEEETTTCHHHHHHTTCCSSS
T ss_pred CccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc----CEEEEEEeccchHHHHHhcCCCCCC
Confidence 456777775 8888877443 479999999999999999999999988766 48999999998876 689999999
Q ss_pred eEEEEe--CCC--cccCceeccCCCCHHHHHHHHHhcCCC
Q 013976 354 TILFFP--AGN--KSFDPINVDVDRTVVALYKFLKKNASI 389 (432)
Q Consensus 354 ~i~~~~--~g~--~~~~~~~y~g~~~~~~l~~fi~~~~~~ 389 (432)
++++|+ +|+ .+. .+.|. +.+.|.++|++.+..
T Consensus 95 t~~~~~~~~g~g~~~~---~~~G~-~~~~l~~~l~~~l~~ 130 (133)
T 3cxg_A 95 TFEFYFNLNNEWVLVH---TVEGA-NQNDIEKAFQKYCLE 130 (133)
T ss_dssp EEEEEEEETTEEEEEE---EEESC-CHHHHHHHHHHHSEE
T ss_pred EEEEEEecCCCeEEEE---EEcCC-CHHHHHHHHHHHHHh
Confidence 999996 776 332 67776 899999999998753
No 115
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.49 E-value=8e-15 Score=140.29 Aligned_cols=101 Identities=16% Similarity=0.275 Sum_probs=84.6
Q ss_pred CCceEEEecccchhhhhcC-CCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCC------CEEEEEEeCCCccc--ccCC
Q 013976 278 DGDVKIVVGNNFDEIVLDE-SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVD------SIVIAKMDGTTNEH--HRAK 348 (432)
Q Consensus 278 ~~~v~~l~~~~~~~~~~~~-~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~------~~~~~~id~~~~~~--~~~~ 348 (432)
.+.|..|+..+|++.+... .+++||.|||+||++|+.+.|.|.++++.+.... .+.|+.||++.+.. .+++
T Consensus 22 ~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~ 101 (470)
T 3qcp_A 22 DSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYD 101 (470)
T ss_dssp CTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTT
T ss_pred CCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcC
Confidence 5679999999999987543 4799999999999999999999999999997532 49999999999876 6899
Q ss_pred CCCCceEEEEeCCCcccCceeccCCCCHHHH
Q 013976 349 SDGFPTILFFPAGNKSFDPINVDVDRTVVAL 379 (432)
Q Consensus 349 i~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l 379 (432)
|.++||+++|.+|... .+..|.|.++.+.|
T Consensus 102 V~~~PTlilf~~gg~~-~~~~y~G~r~~e~L 131 (470)
T 3qcp_A 102 INFVPRLFFFYPRDSC-RSNEECGTSSLEHV 131 (470)
T ss_dssp CCSSCEEEEEEESSCC-CTTSCCCCCCEEEE
T ss_pred CCccCeEEEEECCCce-EEEEeeCCCCHHHH
Confidence 9999999999776654 56688886555443
No 116
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.48 E-value=1.7e-13 Score=110.19 Aligned_cols=106 Identities=11% Similarity=0.129 Sum_probs=90.8
Q ss_pred ceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCC--CceE
Q 013976 280 DVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDG--FPTI 355 (432)
Q Consensus 280 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~--~P~i 355 (432)
.|..++..+|++.+ ....+++|+||++ |++|+.+.|.++++|+.|++ ++.|+++|++++.. ..|+|.+ +|++
T Consensus 7 lv~~~t~~~f~~~~-~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~g--k~~f~~vd~d~~~~~a~~~gi~~~~iPtl 82 (133)
T 2djk_A 7 LIGEIGPETYSDYM-SAGIPLAYIFAET-AEERKELSDKLKPIAEAQRG--VINFGTIDAKAFGAHAGNLNLKTDKFPAF 82 (133)
T ss_dssp CSEECCHHHHHHHH-HTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTT--TSEEEEECTTTTGGGTTTTTCCSSSSSEE
T ss_pred ceeccChHHHHHHh-cCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCC--eEEEEEEchHHhHHHHHHcCCCcccCCEE
Confidence 36788999999874 6678999999999 89999999999999999987 69999999998876 6899999 9999
Q ss_pred EEEeC--CCcccCceecc--CCCCHHHHHHHHHhcCCCCCcc
Q 013976 356 LFFPA--GNKSFDPINVD--VDRTVVALYKFLKKNASIPFKI 393 (432)
Q Consensus 356 ~~~~~--g~~~~~~~~y~--g~~~~~~l~~fi~~~~~~~~~~ 393 (432)
++|.+ |.+. .+. |..+.+.|.+||++++..+...
T Consensus 83 ~i~~~~~g~~~----~~~~~g~~~~~~l~~fi~~~l~Gkl~p 120 (133)
T 2djk_A 83 AIQEVAKNQKF----PFDQEKEITFEAIKAFVDDFVAGKIEP 120 (133)
T ss_dssp EEECTTTCCBC----CCCSSSCCCHHHHHHHHHHHHHTCCCC
T ss_pred EEEecCcCccc----CCCCccccCHHHHHHHHHHHHcCCcCc
Confidence 99987 5442 444 9999999999999998655543
No 117
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.45 E-value=3.3e-13 Score=132.62 Aligned_cols=114 Identities=25% Similarity=0.397 Sum_probs=95.7
Q ss_pred CCceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcC-CCCEEEEEEeCCC--ccc--ccCCCCCC
Q 013976 278 DGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRG-VDSIVIAKMDGTT--NEH--HRAKSDGF 352 (432)
Q Consensus 278 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~-~~~~~~~~id~~~--~~~--~~~~i~~~ 352 (432)
...|..|++++|+..+.+.+++++|.|||+||++|+.+.|.|.++++.+.+ ...+.|+.|||+. +.. .+++|.++
T Consensus 11 ~~~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~ 90 (519)
T 3t58_A 11 SDPLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGF 90 (519)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSB
T ss_pred CCCcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCccc
Confidence 456999999999998877789999999999999999999999999999986 3469999999975 333 68999999
Q ss_pred ceEEEEeCCCcccC-ceeccCCCCHHHHHHHHHhcCCCCC
Q 013976 353 PTILFFPAGNKSFD-PINVDVDRTVVALYKFLKKNASIPF 391 (432)
Q Consensus 353 P~i~~~~~g~~~~~-~~~y~g~~~~~~l~~fi~~~~~~~~ 391 (432)
|++++|.+|.+..+ ...+.|..+.+.|.++|.+.+....
T Consensus 91 PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~ 130 (519)
T 3t58_A 91 PTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHR 130 (519)
T ss_dssp SEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCC
T ss_pred CEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhcc
Confidence 99999997654211 1356778999999999999986543
No 118
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.42 E-value=1.6e-13 Score=109.83 Aligned_cols=103 Identities=20% Similarity=0.349 Sum_probs=84.8
Q ss_pred Eecccchhhhh---cCCCcEEEEEeCCCChhhhhhHHHH---HHHHHHhcCCCCEEEEEEeCCCc--cc--ccCCCCCCc
Q 013976 284 VVGNNFDEIVL---DESKDVLLEIYAPWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTTN--EH--HRAKSDGFP 353 (432)
Q Consensus 284 l~~~~~~~~~~---~~~~~~lv~f~~~~c~~c~~~~~~~---~~la~~~~~~~~~~~~~id~~~~--~~--~~~~i~~~P 353 (432)
++..+|++.+. ..+++++|.||++||++|+.+.|.+ ..++..+.. ++.++.+|++.. .. ..+++.++|
T Consensus 11 ~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~~~v~~~P 88 (130)
T 2kuc_A 11 FRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR--HFVNLKMDMEKGEGVELRKKYGVHAYP 88 (130)
T ss_dssp CBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH--HSEEEEECSSSTTHHHHHHHTTCCSSC
T ss_pred cccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc--CeEEEEEecCCcchHHHHHHcCCCCCC
Confidence 46788888663 3568999999999999999999999 777777765 689999999852 22 589999999
Q ss_pred eEEEE-eCCCcccCceeccCCCCHHHHHHHHHhcCCCCC
Q 013976 354 TILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNASIPF 391 (432)
Q Consensus 354 ~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~~ 391 (432)
++++| ++|+.+. .+.|..+.+.|.+||+++.....
T Consensus 89 t~~~~d~~G~~~~---~~~G~~~~~~l~~~l~~~~~~~~ 124 (130)
T 2kuc_A 89 TLLFINSSGEVVY---RLVGAEDAPELLKKVKLGVESEG 124 (130)
T ss_dssp EEEEECTTSCEEE---EEESCCCHHHHHHHHHHHHSCCC
T ss_pred EEEEECCCCcEEE---EecCCCCHHHHHHHHHHHHHhcc
Confidence 99999 6776653 78899999999999999876554
No 119
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.42 E-value=3.1e-14 Score=114.06 Aligned_cols=106 Identities=24% Similarity=0.420 Sum_probs=88.8
Q ss_pred CCceEEE-ecccchhhhhc---CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCC
Q 013976 278 DGDVKIV-VGNNFDEIVLD---ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDG 351 (432)
Q Consensus 278 ~~~v~~l-~~~~~~~~~~~---~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~ 351 (432)
.+.+..+ +.++|++.+.. .+++++|.||++||++|+.+.|.|.+++..+. ++.|+.+|++.+.. .++++.+
T Consensus 13 ~~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~v~~~~v~~~~~~~~~~~~~v~~ 89 (130)
T 1wmj_A 13 EGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP---GAVFLKVDVDELKEVAEKYNVEA 89 (130)
T ss_dssp CSSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT---TBCCEECCTTTSGGGHHHHTCCS
T ss_pred CcceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC---CCEEEEEeccchHHHHHHcCCCc
Confidence 3456666 45888887754 47899999999999999999999999999986 49999999998766 6899999
Q ss_pred CceEEEEeCCCcccCceeccCCCCHHHHHHHHHhcCCCC
Q 013976 352 FPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIP 390 (432)
Q Consensus 352 ~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~ 390 (432)
+|++++|++|+.+. .+.| .+.+.|.++|++.+...
T Consensus 90 ~Pt~~~~~~g~~~~---~~~g-~~~~~l~~~l~~~~~~~ 124 (130)
T 1wmj_A 90 MPTFLFIKDGAEAD---KVVG-ARKDDLQNTIVKHVGAT 124 (130)
T ss_dssp SCCCCBCTTTTCCB---CCCT-TCTTTHHHHHHHHTSSS
T ss_pred cceEEEEeCCeEEE---EEeC-CCHHHHHHHHHHHHhcc
Confidence 99999998887664 6677 58889999999988643
No 120
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.42 E-value=7.6e-13 Score=97.26 Aligned_cols=81 Identities=21% Similarity=0.275 Sum_probs=71.3
Q ss_pred CcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEEEEeCCCcccCceeccCCCC
Q 013976 298 KDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFFPAGNKSFDPINVDVDRT 375 (432)
Q Consensus 298 ~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~~~~~g~~~~~~~~y~g~~~ 375 (432)
...++.||++||++|+.+.|.+.+++..+.+ ++.++.+|++++.. .++++.++|++++ +|+. .+.|..+
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~-----~~~G~~~ 73 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD--AVEVEYINVMENPQKAMEYGIMAVPTIVI--NGDV-----EFIGAPT 73 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS--SEEEEEEESSSSCCTTTSTTTCCSSEEEE--TTEE-----ECCSSSS
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC--ceEEEEEECCCCHHHHHHCCCcccCEEEE--CCEE-----eeecCCC
Confidence 4679999999999999999999999999986 69999999988776 6899999999999 5532 6888889
Q ss_pred HHHHHHHHHhcC
Q 013976 376 VVALYKFLKKNA 387 (432)
Q Consensus 376 ~~~l~~fi~~~~ 387 (432)
.+.|.++|++++
T Consensus 74 ~~~l~~~l~~~l 85 (85)
T 1fo5_A 74 KEALVEAIKKRL 85 (85)
T ss_dssp SHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC
Confidence 999999998753
No 121
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.42 E-value=2.7e-13 Score=107.45 Aligned_cols=99 Identities=18% Similarity=0.299 Sum_probs=81.2
Q ss_pred eEEEecccchhhhhc-CCCcEEEEEeCC-------CChhhhhhHHHHHHHHHHhcCCCCEEEEEEeC-------CCccc-
Q 013976 281 VKIVVGNNFDEIVLD-ESKDVLLEIYAP-------WCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDG-------TTNEH- 344 (432)
Q Consensus 281 v~~l~~~~~~~~~~~-~~~~~lv~f~~~-------~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~-------~~~~~- 344 (432)
+...+.++|.+.+.+ .+++++|.||++ ||++|+.+.|.|.+++..+.+ ++.|+.+|+ +.+..
T Consensus 7 v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~--~~~~~~vd~~~~~~~~d~~~~~ 84 (123)
T 1wou_A 7 VSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE--GCVFIYCQVGEKPYWKDPNNDF 84 (123)
T ss_dssp EEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT--TEEEEEEECCCHHHHHCTTCHH
T ss_pred EEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC--CcEEEEEECCCchhhhchhHHH
Confidence 566677889988765 578999999999 999999999999999998876 699999999 44444
Q ss_pred -ccCCCCCCceEEEEeCCCcccCceeccCCCCHHHHHHHHHh
Q 013976 345 -HRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKK 385 (432)
Q Consensus 345 -~~~~i~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~ 385 (432)
..++|.++|++++|.++... ..+.| .+.+.|.+||.+
T Consensus 85 ~~~~~i~~~Pt~~~~~~~~~~---~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 85 RKNLKVTAVPTLLKYGTPQKL---VESEC-LQANLVEMLFSE 122 (123)
T ss_dssp HHHHCCCSSSEEEETTSSCEE---EGGGG-GCHHHHHHHHHC
T ss_pred HHHCCCCeeCEEEEEcCCceE---ecccc-CCHHHHHHHHhc
Confidence 57999999999999875543 23443 678899999875
No 122
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.40 E-value=3.3e-13 Score=108.51 Aligned_cols=87 Identities=22% Similarity=0.427 Sum_probs=74.8
Q ss_pred cCCCcEEEEEeCCCChhhhhhHHHHH--HHHHHhcCCCCEEEEEEeC---CCccc--ccCCC---CCCceEEEE-eCCCc
Q 013976 295 DESKDVLLEIYAPWCGHCQAFEPTYN--KLAKHLRGVDSIVIAKMDG---TTNEH--HRAKS---DGFPTILFF-PAGNK 363 (432)
Q Consensus 295 ~~~~~~lv~f~~~~c~~c~~~~~~~~--~la~~~~~~~~~~~~~id~---~~~~~--~~~~i---~~~P~i~~~-~~g~~ 363 (432)
..+++++|.||++||++|+.+.|.|. +++..+.+ ++.++.+|+ +.+.. ..++| .++|++++| ++|+.
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~--~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~ 104 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK--HFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKV 104 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH--HCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCE
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC--CEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCE
Confidence 45799999999999999999999999 99999976 699999999 55544 68999 999999999 78876
Q ss_pred ccCceeccC-------CCCHHHHHHHHHhc
Q 013976 364 SFDPINVDV-------DRTVVALYKFLKKN 386 (432)
Q Consensus 364 ~~~~~~y~g-------~~~~~~l~~fi~~~ 386 (432)
+. .+.| ..+.+.+.+||++.
T Consensus 105 ~~---~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 105 RY---TTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp EE---ECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred EE---EecCCcccccccCCHHHHHHHHHHh
Confidence 54 5666 67999999999875
No 123
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.40 E-value=6.8e-13 Score=106.80 Aligned_cols=99 Identities=25% Similarity=0.484 Sum_probs=80.2
Q ss_pred ecccchhhhhc-CCCcEEEEEeCCCChhhhhhHHHH---HHHHHHhcCCCCEEEEEEeCCCccc------ccCCCCCCce
Q 013976 285 VGNNFDEIVLD-ESKDVLLEIYAPWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTTNEH------HRAKSDGFPT 354 (432)
Q Consensus 285 ~~~~~~~~~~~-~~~~~lv~f~~~~c~~c~~~~~~~---~~la~~~~~~~~~~~~~id~~~~~~------~~~~i~~~P~ 354 (432)
+.++|...+.+ .++++||.||++||++|+.+.+.+ .+++..+++ +.++.+|++.+.. ..++|.++|+
T Consensus 18 ~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~---~~~~~vd~~~~~~~~~~l~~~~~v~~~Pt 94 (134)
T 2fwh_A 18 TVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD---TVLLQANVTANDAQDVALLKHLNVLGLPT 94 (134)
T ss_dssp SHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT---SEEEEEECTTCCHHHHHHHHHTTCCSSSE
T ss_pred CHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC---cEEEEEeCCCCcchHHHHHHHcCCCCCCE
Confidence 34666666643 378999999999999999999999 899988864 9999999976432 4799999999
Q ss_pred EEEE-eCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 355 ILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 355 i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
+++| ++|+.+ ....+.|..+.+.|.++|++..
T Consensus 95 ~~~~d~~G~~v-~~~~~~G~~~~~~l~~~l~~~~ 127 (134)
T 2fwh_A 95 ILFFDGQGQEH-PQARVTGFMDAETFSAHLRDRQ 127 (134)
T ss_dssp EEEECTTSCBC-GGGCBCSCCCHHHHHHHHHHC-
T ss_pred EEEECCCCCEe-eeeeeeeccCHHHHHHHHHhcC
Confidence 9999 777764 1137899999999999998764
No 124
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.40 E-value=6.8e-12 Score=111.63 Aligned_cols=195 Identities=10% Similarity=0.008 Sum_probs=136.8
Q ss_pred eeCCHHHHHHHhhc-CCeEEEEEecCC--Ccc---hHHHHHHHhccCCC------ceEEEeC---cHHHHhHcCCCCCCC
Q 013976 50 NITTLDEAERVLTS-ETKVVLGYLNSL--VGS---ESEVLADASRLEDD------VNFYQTT---NPDVAKIFHLDSKVN 114 (432)
Q Consensus 50 ~i~~~~~l~~~~~~-~~~~vv~f~~~~--~~~---~~~~f~~~a~~~~~------~~F~~~~---~~~~~~~~~~~~~~~ 114 (432)
..++.++|+.++.. ...++|.||... +.+ ....+.++|+..+. +.|+.++ ++++++.||+..
T Consensus 10 ~~~~~~ql~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~--- 86 (243)
T 2hls_A 10 SEDFRRELRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVER--- 86 (243)
T ss_dssp CHHHHHHHHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCS---
T ss_pred CHHHHHHHHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCc---
Confidence 44566788888765 234455555444 443 33345566644333 8888754 578999999985
Q ss_pred CCeEEEEecCCCceecccCCCCCHHHHHHHHHhcCC--CceeecCCCchhhhccC-CCcceEEEEEeC-cchhhhHHHHH
Q 013976 115 RPALVMVKKETEKISYFADGKFDKSTIADFVFSNKL--PLVTIFTRENAPSVFES-PIKNQLLLFAVS-NDSEKLLPVFE 190 (432)
Q Consensus 115 ~p~i~l~~~~~~~~~~y~~g~~~~~~l~~fi~~~~~--p~v~~l~~~~~~~~~~~-~~~~~i~~~~~~-~~~~~~~~~~~ 190 (432)
.|++.++ . + ...| .|......+..|+..... ..-..++.+++..+... +...++.||++| ++|+.+.+.|.
T Consensus 87 ~Pt~~i~-~-g--~~~~-~G~~~~~~l~~fv~~~l~~~~~~~~l~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~ 161 (243)
T 2hls_A 87 VPTVAFL-G-G--EVRW-TGIPAGEEIRALVEVIMRLSEDESGLEDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAH 161 (243)
T ss_dssp SSEEEET-T-T--TEEE-ESCCCTTHHHHHHHHHHHHHTTCCCCCHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHH
T ss_pred CCEEEEE-C-C--ceeE-cCCCcHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHH
Confidence 7999998 3 2 5667 777777788888765321 11123444444444322 334467799999 99999999999
Q ss_pred HHHHhcc----CceEEEEEecCCcccccchhhhhCCCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcC
Q 013976 191 EAAKSFK----GKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 262 (432)
Q Consensus 191 ~~a~~~~----~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g 262 (432)
++|..+. +++.++.+|++. ++.+++.||+.+. |++++ ++ .. .+.|.++.+.|.+|+...+..
T Consensus 162 ~la~~~~~~~~~~v~~~~vd~~~---~~~~~~~~~V~~v--Pt~~i--~G--~~-~~~G~~~~~~l~~~l~~~~~~ 227 (243)
T 2hls_A 162 MFAYEAWKQGNPVILSEAVEAYE---NPDIADKYGVMSV--PSIAI--NG--YL-VFVGVPYEEDFLDYVKSAAEG 227 (243)
T ss_dssp HHHHHHHHTTCCCEEEEEEETTT---CHHHHHHTTCCSS--SEEEE--TT--EE-EEESCCCHHHHHHHHHHHHTT
T ss_pred HHHHHcccccCCcEEEEEEECcc---CHHHHHHcCCeee--CeEEE--CC--EE-EEeCCCCHHHHHHHHHHHhhc
Confidence 9999983 569999999998 5688999999988 99977 22 22 378999999999999998864
No 125
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.39 E-value=8.7e-13 Score=96.92 Aligned_cols=80 Identities=14% Similarity=0.151 Sum_probs=70.7
Q ss_pred cEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEEEEeCCCcccCceeccCCCCH
Q 013976 299 DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFFPAGNKSFDPINVDVDRTV 376 (432)
Q Consensus 299 ~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~~~~~g~~~~~~~~y~g~~~~ 376 (432)
..+|.||++||++|+.+.|.+.+++..+.+ ++.++.+|++.+.. .++++.++|++++ +|+. .+.|..+.
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~-----~~~G~~~~ 73 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD--KIDVEKIDIMVDREKAIEYGLMAVPAIAI--NGVV-----RFVGAPSR 73 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS--SCCEEEECTTTCGGGGGGTCSSCSSEEEE--TTTE-----EEECSSCC
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC--CeEEEEEECCCCHHHHHhCCceeeCEEEE--CCEE-----EEccCCCH
Confidence 368999999999999999999999999986 69999999998876 6899999999999 5542 68888899
Q ss_pred HHHHHHHHhcC
Q 013976 377 VALYKFLKKNA 387 (432)
Q Consensus 377 ~~l~~fi~~~~ 387 (432)
+.|.++|++.+
T Consensus 74 ~~l~~~l~~~l 84 (85)
T 1nho_A 74 EELFEAINDEM 84 (85)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHHh
Confidence 99999998865
No 126
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.38 E-value=1.5e-11 Score=110.15 Aligned_cols=212 Identities=16% Similarity=0.137 Sum_probs=153.1
Q ss_pred cCCCceeecC-CCchhhhccCCCcceEEEEEeCcchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCC
Q 013976 148 NKLPLVTIFT-RENAPSVFESPIKNQLLLFAVSNDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEA 226 (432)
Q Consensus 148 ~~~p~v~~l~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~ 226 (432)
.+-|.+.+++ .+.+..++.....++|.||.++ +......|.++|..+++.+.|+.+. ...+++.++++.
T Consensus 3 ~~gP~v~~l~s~~~~~~~l~~~~v~vvgff~~~--~~~~~~~f~~~A~~lr~~~~F~~~~------~~~v~~~~~~~~-- 72 (252)
T 2h8l_A 3 LGSPASVPLRTEEEFKKFISDKDASIVGFFDDS--FSEAHSEFLKAASNLRDNYRFAHTN------VESLVNEYDDNG-- 72 (252)
T ss_dssp ---CCEEECCSHHHHHHHHTSSSCEEEEEESCT--TSHHHHHHHHHHHHTTTTSCEEEEC------CHHHHHHHCSSS--
T ss_pred cCCCCceeecCHHHHHHHhhcCCeEEEEEECCC--CChHHHHHHHHHHhcccCcEEEEEC------hHHHHHHhCCCC--
Confidence 3567788885 4556666666655566677654 5566778999999999999998874 346889999973
Q ss_pred CcEEEEEeCC------CCceecC-CCCCCHHHHHHHHHHHhcCCcCccccCCCCCCCCCCceEEEecccchhhhhcCCCc
Q 013976 227 PKVLAYTGND------DAKKHIL-DGELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKD 299 (432)
Q Consensus 227 ~P~i~i~~~~------~~~~y~~-~~~~~~~~i~~fi~~~~~g~l~~~~~se~~p~~~~~~v~~l~~~~~~~~~~~~~~~ 299 (432)
|+++++.++ ......| .|.++.+.|.+||....- +.|..++..++..+ .+.+
T Consensus 73 -p~i~~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~-----------------Plv~e~t~~n~~~~---~~~~ 131 (252)
T 2h8l_A 73 -EGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIF-----------------GICPHMTEDNKDLI---QGKD 131 (252)
T ss_dssp -EEEEEECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSS-----------------CSSCEECTTTHHHH---SSSS
T ss_pred -CcEEEEcchhhcccccccccccCCCCcCHHHHHHHHHhccc-----------------CCeeecccccHhhh---cCCC
Confidence 888877642 1345667 899999999999999652 34788999999885 2456
Q ss_pred EEEEEeCCCChhh----hhhHHHHHHHHHHhcC-CCCEEEEEEeCCCccc--ccCCC----CCCceEEEEeCCCcccCce
Q 013976 300 VLLEIYAPWCGHC----QAFEPTYNKLAKHLRG-VDSIVIAKMDGTTNEH--HRAKS----DGFPTILFFPAGNKSFDPI 368 (432)
Q Consensus 300 ~lv~f~~~~c~~c----~~~~~~~~~la~~~~~-~~~~~~~~id~~~~~~--~~~~i----~~~P~i~~~~~g~~~~~~~ 368 (432)
++|.|+...+..+ ..+...+.++|+.+++ ...+.|+.+|+..... ..+++ ..+|.++++...... .
T Consensus 132 ~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~~~~k---y 208 (252)
T 2h8l_A 132 LLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAKGEK---F 208 (252)
T ss_dssp EEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCSCSSCEEEEECTTSCE---E
T ss_pred eEEEEeecchhhcchhHHHHHHHHHHHHHHccccCceEEEEEEchHHHHHHHHHcCCCCccCCCCEEEEEeCcCcE---e
Confidence 7777775543222 2477889999999986 2349999999987765 56777 369999999543221 2
Q ss_pred eccCCCCHHH--HHHHHHhcCCCCCcc
Q 013976 369 NVDVDRTVVA--LYKFLKKNASIPFKI 393 (432)
Q Consensus 369 ~y~g~~~~~~--l~~fi~~~~~~~~~~ 393 (432)
.+.+..+.+. |.+|+++....+...
T Consensus 209 ~~~~~~t~~~~~i~~F~~~~~~Gkl~~ 235 (252)
T 2h8l_A 209 VMQEEFSRDGKALERFLQDYFDGNLKR 235 (252)
T ss_dssp ECCSCCCTTSHHHHHHHHHHHHTCSCC
T ss_pred cCCcccCcchHHHHHHHHHHHCCCccc
Confidence 4667788888 999999998776644
No 127
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.37 E-value=6.1e-13 Score=102.31 Aligned_cols=87 Identities=11% Similarity=0.108 Sum_probs=68.7
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCC---CCEEEEEEeCCCccc----ccCCCCCCceEEEEeCCCcccCce
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGV---DSIVIAKMDGTTNEH----HRAKSDGFPTILFFPAGNKSFDPI 368 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~---~~~~~~~id~~~~~~----~~~~i~~~P~i~~~~~g~~~~~~~ 368 (432)
+.+.+||+|||+||++|+.+.+. ++..+... ..+.+.++|++.+.. ..++|.++||+++|.+|+.+.
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~---i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~--- 90 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAE---IAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESG--- 90 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHH---TTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEE---
T ss_pred cCCCEEEEEECCCCHHHHHHHHH---HHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEe---
Confidence 34789999999999999999753 33334331 127788899988743 478999999999999998876
Q ss_pred eccCCCCHHHHHHHHHhcCC
Q 013976 369 NVDVDRTVVALYKFLKKNAS 388 (432)
Q Consensus 369 ~y~g~~~~~~l~~fi~~~~~ 388 (432)
+..|....+.+..||.+.+.
T Consensus 91 Ri~G~~~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 91 RLEGYPGEDFFWPMLARLIG 110 (116)
T ss_dssp EEECCCCHHHHHHHHHHHHH
T ss_pred eecCCCCHHHHHHHHHHHHh
Confidence 88999999999999988653
No 128
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.35 E-value=1.4e-12 Score=109.84 Aligned_cols=99 Identities=14% Similarity=0.214 Sum_probs=78.7
Q ss_pred Eecccchhhhh---cCCCcEEEEEeCCCChhhhhhHHHH---HHHHHHhcCCCCEEEEEEeCCCcc--------------
Q 013976 284 VVGNNFDEIVL---DESKDVLLEIYAPWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTTNE-------------- 343 (432)
Q Consensus 284 l~~~~~~~~~~---~~~~~~lv~f~~~~c~~c~~~~~~~---~~la~~~~~~~~~~~~~id~~~~~-------------- 343 (432)
++..+|++.+. ..+++++|.|||+||++|+.+.+.+ .++.+.+++ ++.++.+|++.+.
T Consensus 31 ~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~~~~ 108 (172)
T 3f9u_A 31 AKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN--DYVLITLYVDNKTPLTEPVKIMENGTE 108 (172)
T ss_dssp CCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH--HCEEEEEETTCCCEEEEEEEEEETTEE
T ss_pred cchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC--CEEEEEEecCcccccchhhhhhhcchh
Confidence 44567776553 4578999999999999999975544 666666665 6999999998776
Q ss_pred --------------cccCCCCCCceEEEE-eCCCcccCceeccCCCC-HHHHHHHHHhcC
Q 013976 344 --------------HHRAKSDGFPTILFF-PAGNKSFDPINVDVDRT-VVALYKFLKKNA 387 (432)
Q Consensus 344 --------------~~~~~i~~~P~i~~~-~~g~~~~~~~~y~g~~~-~~~l~~fi~~~~ 387 (432)
...+++.++|+++++ ++|+.+. .+.|..+ .+.+.++|++.+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~---~~~G~~~~~~~l~~~l~~~l 165 (172)
T 3f9u_A 109 RTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLN---KSYAYDEDISKYINFLQTGL 165 (172)
T ss_dssp EEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSS---CCBCSCCCHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEe---eccCCCCCHHHHHHHHHHHH
Confidence 345789999999999 7787764 6778887 999999998865
No 129
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.30 E-value=1.7e-12 Score=98.38 Aligned_cols=96 Identities=14% Similarity=0.166 Sum_probs=77.3
Q ss_pred eEEEe-cccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc------ccCCCC-CC
Q 013976 281 VKIVV-GNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH------HRAKSD-GF 352 (432)
Q Consensus 281 v~~l~-~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~------~~~~i~-~~ 352 (432)
...|+ .++|++.+ +.+++++|+|||+||++|+.+.|.|++++.. . ++.|+.+|++++.. .+++|. ..
T Consensus 8 ~~~i~s~e~f~~ii-~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~--~v~~~~vdVde~r~~Sn~IA~~~~V~h~s 82 (112)
T 3iv4_A 8 AIKLSSIDQFEQVI-EENKYVFVLKHSETCPISANAYDQFNKFLYE--R--DMDGYYLIVQQERDLSDYIAKKTNVKHES 82 (112)
T ss_dssp EEECCSHHHHHHHH-HHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--H--TCCEEEEEGGGGHHHHHHHHHHHTCCCCS
T ss_pred eeecCCHHHHHHHH-hcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--C--CceEEEEEeecCchhhHHHHHHhCCccCC
Confidence 44554 47788866 4489999999999999999999999999984 2 69999999998853 689999 59
Q ss_pred ceEEEEeCCCcccCceeccCCCCHHHHHHHH
Q 013976 353 PTILFFPAGNKSFDPINVDVDRTVVALYKFL 383 (432)
Q Consensus 353 P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi 383 (432)
|++++|++|+.+.+ .-.+..+...|.+.+
T Consensus 83 Pq~il~k~G~~v~~--~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 83 PQAFYFVNGEMVWN--RDHGDINVSSLAQAE 111 (112)
T ss_dssp SEEEEEETTEEEEE--EEGGGCSHHHHHHHT
T ss_pred CeEEEEECCEEEEE--eeccccCHHHHHHhh
Confidence 99999999988641 234577888777654
No 130
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.30 E-value=1.5e-11 Score=97.82 Aligned_cols=105 Identities=14% Similarity=0.119 Sum_probs=90.2
Q ss_pred CCceeecCCCchhhhcc-CCCcceEEEEEeC-cchhhhHHHHHHHHHhcc-----CceEEEEEecCCcccccchhhhhCC
Q 013976 150 LPLVTIFTRENAPSVFE-SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFK-----GKLIFVYVQMDNEDVGKPVSEYFGI 222 (432)
Q Consensus 150 ~p~v~~l~~~~~~~~~~-~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~-----~~i~f~~vd~~~~~~~~~l~~~~~i 222 (432)
.+.+..++.+++...+. .+++++|.||++| ++|+.+.+.|.++|..+. +.+.|+.+|++. ++.+++.|+|
T Consensus 14 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~---~~~l~~~~~v 90 (127)
T 3h79_A 14 PSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEK---YPDVIERMRV 90 (127)
T ss_dssp CCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTT---CHHHHHHTTC
T ss_pred CCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccc---cHhHHHhcCC
Confidence 34688999999998774 5778899999999 999999999999998764 569999999998 6699999999
Q ss_pred CCCCCcEEEEEeCCCCc-eecCCCCCCHHHHHHHHHHH
Q 013976 223 TGEAPKVLAYTGNDDAK-KHILDGELTLDKIKTFGEDF 259 (432)
Q Consensus 223 ~~~~~P~i~i~~~~~~~-~y~~~~~~~~~~i~~fi~~~ 259 (432)
.++ |+++++..++.. ...+.|.++.+.|.+||.+.
T Consensus 91 ~~~--Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 91 SGF--PTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp CSS--SEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred ccC--CEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 998 999999766532 36789999999999999874
No 131
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.96 E-value=2.5e-13 Score=108.79 Aligned_cols=93 Identities=19% Similarity=0.245 Sum_probs=76.9
Q ss_pred cCCCcEEEEEeCCCChhhhhhHHHH---HHHHHHhcCCCCEEEEEEeCCCc--cc--ccCCCCCCceEEEE--eCCCc--
Q 013976 295 DESKDVLLEIYAPWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTTN--EH--HRAKSDGFPTILFF--PAGNK-- 363 (432)
Q Consensus 295 ~~~~~~lv~f~~~~c~~c~~~~~~~---~~la~~~~~~~~~~~~~id~~~~--~~--~~~~i~~~P~i~~~--~~g~~-- 363 (432)
..++++||+||++||++|+.+.|.+ .++++.+.. ++.++.+|++.. .. ..++|.++|++++| .+|+.
T Consensus 17 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G~~~~ 94 (130)
T 2lst_A 17 AHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA--RFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAGAWEE 94 (130)
Confidence 4568999999999999999999999 889888876 699999998533 22 58899999999999 55665
Q ss_pred ccCceeccCCCCHHHHHHHHHhcCCCCCc
Q 013976 364 SFDPINVDVDRTVVALYKFLKKNASIPFK 392 (432)
Q Consensus 364 ~~~~~~y~g~~~~~~l~~fi~~~~~~~~~ 392 (432)
+. .+.|..+.+.|.++|++.++....
T Consensus 95 ~~---~~~G~~~~~~l~~~l~~~~~~~~~ 120 (130)
T 2lst_A 95 VG---RLFGSRPRAEFLKELRQVCVKGGA 120 (130)
Confidence 33 788989999999999988765443
No 132
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.27 E-value=1.7e-10 Score=103.14 Aligned_cols=210 Identities=12% Similarity=0.099 Sum_probs=149.7
Q ss_pred CCCceeecCC-CchhhhccC-CCcceEEEEEeCcchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCC
Q 013976 149 KLPLVTIFTR-ENAPSVFES-PIKNQLLLFAVSNDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEA 226 (432)
Q Consensus 149 ~~p~v~~l~~-~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~ 226 (432)
+-|.+.+++. +.+..++.. ...++|-||.+ .+......|.++|..+++.+.|+... ...++..++++.
T Consensus 4 ~gP~v~~l~s~~~~~~~~~~~~~v~vVgff~~--~~~~~~~~F~~~A~~lr~~~~F~~t~------~~~v~~~~~v~~-- 73 (250)
T 3ec3_A 4 GSPPSKEILTLKQVQEFLKDGDDVVILGVFQG--VGDPGYLQYQDAANTLREDYKFHHTF------STEIAKFLKVSL-- 73 (250)
T ss_dssp -CCSSEECCCHHHHHHHHHHCSSCEEEEECSC--TTCHHHHHHHHHHHHHTTTCCEEEEC------CHHHHHHHTCCS--
T ss_pred CCCCceecCCHHHHHHHHhcCCCeEEEEEEcC--CCchHHHHHHHHHHhhhcCcEEEEEC------cHHHHHHcCCCC--
Confidence 4577777765 666666665 54555556654 35677888999999999999999874 346788899864
Q ss_pred CcEEEEEeCC------CCceecCC--CCCCHHHHHHHHHHHhcCCcCccccCCCCCCCCCCceEEEecccchhhhhcCCC
Q 013976 227 PKVLAYTGND------DAKKHILD--GELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESK 298 (432)
Q Consensus 227 ~P~i~i~~~~------~~~~y~~~--~~~~~~~i~~fi~~~~~g~l~~~~~se~~p~~~~~~v~~l~~~~~~~~~~~~~~ 298 (432)
|+++++.++ ......|. |.++.+.|.+||....- +.|..++..++.... . ++
T Consensus 74 -p~ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~-----------------Plv~e~t~~n~~~~~-~-~~ 133 (250)
T 3ec3_A 74 -GKLVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHAL-----------------PLVGHRKTSNDAKRY-S-KR 133 (250)
T ss_dssp -SEEEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSS-----------------CTEEEECTTTHHHHS-C-SS
T ss_pred -CeEEEEecchhhccccccceeccCCCCCCHHHHHHHHHHcCC-----------------CceeecCccchhhhh-c-cC
Confidence 888888642 12344556 57899999999999642 348889999998865 3 67
Q ss_pred cEEEEEeCC-CC----hhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCC--C-ceEEEEeCCCcccCce
Q 013976 299 DVLLEIYAP-WC----GHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDG--F-PTILFFPAGNKSFDPI 368 (432)
Q Consensus 299 ~~lv~f~~~-~c----~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~--~-P~i~~~~~g~~~~~~~ 368 (432)
++++.|+.. .+ ..+..+...+.++|+.++ ++.|+.+|+..+.. ..+++.. + |.++++..+... .
T Consensus 134 ~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k---ki~F~~~d~~~~~~~l~~fgl~~~~~~p~~~~~~~~~~k---y 207 (250)
T 3ec3_A 134 PLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP---EYTFAIADEEDYATEVKDLGLSESGGDVNAAILDESGKK---F 207 (250)
T ss_dssp SEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT---TSEEEEEETTTTHHHHHHTTCSSCSCSCEEEEECTTSCE---E
T ss_pred ccEEEEEecccccccchhHHHHHHHHHHHHHhhc---ceeEEEEcHHHHHHHHHHcCCCccCCCcEEEEEcCCCce---e
Confidence 777777753 22 234567888999999988 49999999987655 4667763 4 467666533221 1
Q ss_pred ecc-CCCCHHHHHHHHHhcCCCCCccc
Q 013976 369 NVD-VDRTVVALYKFLKKNASIPFKIQ 394 (432)
Q Consensus 369 ~y~-g~~~~~~l~~fi~~~~~~~~~~~ 394 (432)
.+. +..+.+.|.+|+++....+....
T Consensus 208 ~~~~~~~t~~~i~~Fv~~~~~Gkl~p~ 234 (250)
T 3ec3_A 208 AMEPEEFDSDALREFVMAFKKGKLKPV 234 (250)
T ss_dssp ECCCCSCCHHHHHHHHHHHHTTCCCCC
T ss_pred cCCcccCCHHHHHHHHHHHHCCCccce
Confidence 344 67899999999999998876543
No 133
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.24 E-value=7.4e-11 Score=94.14 Aligned_cols=106 Identities=20% Similarity=0.194 Sum_probs=92.3
Q ss_pred CceeecCCCchhh-hccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCc
Q 013976 151 PLVTIFTRENAPS-VFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPK 228 (432)
Q Consensus 151 p~v~~l~~~~~~~-~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P 228 (432)
+.+..++.+++.. +...++++++.||++| +.|+.+.+.+.+++.++.+.+.|+.+|++. +..+++.|++... |
T Consensus 17 ~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~---~~~l~~~~~v~~~--P 91 (130)
T 2dml_A 17 DDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADK---HQSLGGQYGVQGF--P 91 (130)
T ss_dssp SSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTT---CHHHHHHHTCCSS--S
T ss_pred CCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCC---CHHHHHHcCCCcc--C
Confidence 3577889999987 4466778889999999 999999999999999999999999999988 5689999999988 9
Q ss_pred EEEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 229 VLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 229 ~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
++++++.+......+.|..+.+.+.+|+.+.+.
T Consensus 92 t~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 92 TIKIFGANKNKPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp EEEEESSCTTSCEECCSCCSHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCeEEEeecCCCHHHHHHHHHHHHh
Confidence 999997765446778899999999999998774
No 134
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.24 E-value=1.7e-11 Score=101.08 Aligned_cols=87 Identities=16% Similarity=0.283 Sum_probs=73.4
Q ss_pred CCCcEEEEEe-CCCChhhhhhHHHH---HHHHHHhcCCCCEEEEEEeCCCcc-----------c--ccCCCCCCceEEEE
Q 013976 296 ESKDVLLEIY-APWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTTNE-----------H--HRAKSDGFPTILFF 358 (432)
Q Consensus 296 ~~~~~lv~f~-~~~c~~c~~~~~~~---~~la~~~~~~~~~~~~~id~~~~~-----------~--~~~~i~~~P~i~~~ 358 (432)
.+++++|.|| ++||++|+.+.|.+ .+++..+.. ++.++.+|++... . ..++|.++|+++++
T Consensus 46 ~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~--~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~~~ 123 (154)
T 2ju5_A 46 DHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV--HLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGFPELVFI 123 (154)
T ss_dssp HCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH--HCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSSSEEEEE
T ss_pred CCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC--cEEEEEecCccccCCChhhHhhHHHHHHHcCCCCCCEEEEE
Confidence 4689999999 99999999999999 778776654 6999999998764 1 57999999999999
Q ss_pred -eCCCcccCceeccCCC--CHHHHHHHHHhcCC
Q 013976 359 -PAGNKSFDPINVDVDR--TVVALYKFLKKNAS 388 (432)
Q Consensus 359 -~~g~~~~~~~~y~g~~--~~~~l~~fi~~~~~ 388 (432)
++|+.+. .+ |.. +.+.+.++|++.++
T Consensus 124 d~~G~~~~---~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 124 DAEGKQLA---RM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp CTTCCEEE---EE-CCCTTCHHHHHHHHHHHHT
T ss_pred cCCCCEEE---Ee-cCCCCCHHHHHHHHHHHHh
Confidence 7777653 56 877 89999999998765
No 135
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.22 E-value=3.2e-11 Score=92.93 Aligned_cols=105 Identities=16% Similarity=0.237 Sum_probs=92.3
Q ss_pred CCceeecCCCchhhhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCc
Q 013976 150 LPLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPK 228 (432)
Q Consensus 150 ~p~v~~l~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P 228 (432)
.+.+..++.+++...+..++++++.||++| +.|+.+.+.+.+++..+.+++.|+.+|++. .+.+++.|++.+. |
T Consensus 3 ~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~i~~~--P 77 (109)
T 3tco_A 3 EDVTLVLTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDE---NQKIADKYSVLNI--P 77 (109)
T ss_dssp CCCCEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTT---CHHHHHHTTCCSS--S
T ss_pred CCeEEEecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEcccc---CHHHHHhcCcccC--C
Confidence 356788999999998888888899999999 999999999999999999899999999998 5689999999988 9
Q ss_pred EEEEEeCCCCceecCCCCCCHHHHHHHHHHHh
Q 013976 229 VLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 260 (432)
Q Consensus 229 ~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~ 260 (432)
+++++.++ .....+.|..+.+.|.+|+++++
T Consensus 78 t~~~~~~g-~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 78 TTLIFVNG-QLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp EEEEEETT-EEEEEEESCCCHHHHHHHHHHHC
T ss_pred EEEEEcCC-cEEEeeeccCCHHHHHHHHHHHh
Confidence 99888443 34456788899999999999875
No 136
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.21 E-value=9.9e-11 Score=94.71 Aligned_cols=108 Identities=13% Similarity=0.166 Sum_probs=94.0
Q ss_pred CceeecCCCchhhhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCc---eEEEEEecCCcccccchhhhhCCCCCC
Q 013976 151 PLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK---LIFVYVQMDNEDVGKPVSEYFGITGEA 226 (432)
Q Consensus 151 p~v~~l~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~---i~f~~vd~~~~~~~~~l~~~~~i~~~~ 226 (432)
..+..++.+++...+..++++++.||++| +.|+.+.+.|.+++..+.+. +.|+.+|++. +..+++.|++...
T Consensus 17 ~~v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~---~~~~~~~~~v~~~- 92 (140)
T 2dj1_A 17 NGVWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATS---ASMLASKFDVSGY- 92 (140)
T ss_dssp TTEEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTT---CHHHHHHTTCCSS-
T ss_pred CCCEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcc---cHHHHHHCCCCcc-
Confidence 34788999999998888888899999999 99999999999999999875 9999999988 5689999999988
Q ss_pred CcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcCCcC
Q 013976 227 PKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKLK 265 (432)
Q Consensus 227 ~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g~l~ 265 (432)
|+++++.++. ...+.|..+.+.|.+|+.+.+.....
T Consensus 93 -Pt~~~~~~G~--~~~~~g~~~~~~l~~~l~~~~~~~~~ 128 (140)
T 2dj1_A 93 -PTIKILKKGQ--AVDYDGSRTQEEIVAKVREVSQPDWT 128 (140)
T ss_dssp -SEEEEEETTE--EEECCSCCCHHHHHHHHHHHHSSSCC
T ss_pred -CeEEEEECCc--EEEcCCCCCHHHHHHHHHHhcCCCCC
Confidence 9999885543 66788999999999999999875543
No 137
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.20 E-value=8.9e-11 Score=91.08 Aligned_cols=103 Identities=16% Similarity=0.132 Sum_probs=89.0
Q ss_pred eeecCCCchhhhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEE
Q 013976 153 VTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLA 231 (432)
Q Consensus 153 v~~l~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~ 231 (432)
+.+++.+++...+ .++++++.||++| +.|+.+.+.+.+++.++.+++.|+.+|++. ++.+++.||+.+. |+++
T Consensus 3 v~~l~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~---~~~l~~~~~v~~~--Pt~~ 76 (112)
T 2voc_A 3 IVKATDQSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDE---NQETAGKYGVMSI--PTLL 76 (112)
T ss_dssp CEECCTTTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTT---CCSHHHHTTCCSB--SEEE
T ss_pred eEEecHHHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCC---CHHHHHHcCCCcc--cEEE
Confidence 5678999998877 7778889999999 999999999999999999889999999998 5689999999988 9999
Q ss_pred EEeCCCCceecCCCCCCHHHHHHHHHHHhcC
Q 013976 232 YTGNDDAKKHILDGELTLDKIKTFGEDFLEG 262 (432)
Q Consensus 232 i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g 262 (432)
++.++ .....+.|..+.+.|.+|+.+.+..
T Consensus 77 ~~~~G-~~~~~~~G~~~~~~l~~~l~~~~~~ 106 (112)
T 2voc_A 77 VLKDG-EVVETSVGFKPKEALQELVNKHLLE 106 (112)
T ss_dssp EEETT-EEEEEEESCCCHHHHHHHHHTTSCS
T ss_pred EEeCC-EEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 88433 3455678999999999999987753
No 138
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.19 E-value=1.1e-10 Score=96.98 Aligned_cols=117 Identities=14% Similarity=0.084 Sum_probs=94.1
Q ss_pred HHHHHhcCCCceeecCCCchhhhccC--CCcceEEEEE-------eC-cchhhhHHHHHHHHHhcc-----CceEEEEEe
Q 013976 142 ADFVFSNKLPLVTIFTRENAPSVFES--PIKNQLLLFA-------VS-NDSEKLLPVFEEAAKSFK-----GKLIFVYVQ 206 (432)
Q Consensus 142 ~~fi~~~~~p~v~~l~~~~~~~~~~~--~~~~~i~~~~-------~~-~~~~~~~~~~~~~a~~~~-----~~i~f~~vd 206 (432)
.+++....-..+.+++.++|..++.. +.++++.|++ .| +.|+.+.+.|+++|.+|. +++.|+.||
T Consensus 9 ~~l~~l~~~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD 88 (178)
T 3ga4_A 9 DDILQLKDDTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVD 88 (178)
T ss_dssp HHHHTTCCTTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEE
T ss_pred HHHHHhhccCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEE
Confidence 44444455567899999999998754 3345667777 38 899999999999999998 899999999
Q ss_pred cCCcccccchhhhhCCCCCCCcEEEEEeCCCCce-------------ecCC-C-CCCHHHHHHHHHHHhcCC
Q 013976 207 MDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKK-------------HILD-G-ELTLDKIKTFGEDFLEGK 263 (432)
Q Consensus 207 ~~~~~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~-------------y~~~-~-~~~~~~i~~fi~~~~~g~ 263 (432)
+++ ++.+++.|||++. |+++++.++.... |.+. | .++.+.|.+||.+.++-.
T Consensus 89 ~d~---~~~la~~~~I~si--Ptl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~ 155 (178)
T 3ga4_A 89 VNE---VPQLVKDLKLQNV--PHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNIS 155 (178)
T ss_dssp TTT---CHHHHHHTTCCSS--CEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCC
T ss_pred Ccc---CHHHHHHcCCCCC--CEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCC
Confidence 998 7799999999998 9999998775333 3333 4 789999999999977633
No 139
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.19 E-value=8.9e-11 Score=89.89 Aligned_cols=102 Identities=13% Similarity=0.155 Sum_probs=88.7
Q ss_pred CceeecCCCchhhhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcE
Q 013976 151 PLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKV 229 (432)
Q Consensus 151 p~v~~l~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~ 229 (432)
..+.+++.+++...+ .+++.++.||++| +.|+.+.+.+.++++++.+++.|+.+|++. ++.+++.|++.+. |+
T Consensus 3 ~~v~~l~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~v~~~--Pt 76 (106)
T 3die_A 3 MAIVKVTDADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDE---NPSTAAKYEVMSI--PT 76 (106)
T ss_dssp CCCEECCTTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT---CHHHHHHTTCCSB--SE
T ss_pred cceEECCHHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCc---CHHHHHhCCCccc--CE
Confidence 347788999999888 7778889999999 999999999999999999999999999998 5689999999998 99
Q ss_pred EEEEeCCCCceecCCCCCCHHHHHHHHHHH
Q 013976 230 LAYTGNDDAKKHILDGELTLDKIKTFGEDF 259 (432)
Q Consensus 230 i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~ 259 (432)
++++..+ .....+.|..+.+.|.+|++++
T Consensus 77 ~~~~~~G-~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 77 LIVFKDG-QPVDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp EEEEETT-EEEEEEESCCCHHHHHHHHHTT
T ss_pred EEEEeCC-eEEEEEeCCCCHHHHHHHHHHh
Confidence 9888643 3445678889999999999875
No 140
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.19 E-value=7.3e-12 Score=95.96 Aligned_cols=74 Identities=18% Similarity=0.213 Sum_probs=58.9
Q ss_pred CCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCC------Cccc--ccCCCCCCceEEEEeCCCcccCce
Q 013976 297 SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT------TNEH--HRAKSDGFPTILFFPAGNKSFDPI 368 (432)
Q Consensus 297 ~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~------~~~~--~~~~i~~~P~i~~~~~g~~~~~~~ 368 (432)
++.++|.|||+||++|+.+.|.|.+++..+. .+|++ .+.. ..++|.++||+++ +|.
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~--------~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G~------ 75 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQVP--------YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR------ 75 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGSC--------EEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TTE------
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhCC--------EEEEecccccchhHHHHHHcCCeEeCEEEE--CCE------
Confidence 4567999999999999999999999986553 45555 2222 5799999999877 553
Q ss_pred eccCCCCHHHHHHHHHhc
Q 013976 369 NVDVDRTVVALYKFLKKN 386 (432)
Q Consensus 369 ~y~g~~~~~~l~~fi~~~ 386 (432)
.|.|.++.+.|.+|+.-.
T Consensus 76 ~~~G~~~~~~l~~~~~~~ 93 (106)
T 3kp8_A 76 TYTGVRSLEALAVASGYP 93 (106)
T ss_dssp EEESCCCHHHHHHHHTCC
T ss_pred EecCCCCHHHHHHHhCCc
Confidence 589999999999998543
No 141
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.19 E-value=8.9e-11 Score=95.73 Aligned_cols=102 Identities=13% Similarity=0.199 Sum_probs=82.6
Q ss_pred EEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCc-------------------
Q 013976 282 KIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN------------------- 342 (432)
Q Consensus 282 ~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~------------------- 342 (432)
..++++.+..... .+++++|.||++||++|+.+.+.+.+++..+.+ ++.++.++++..
T Consensus 15 ~~~~g~~~~~~~~-~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 91 (148)
T 2b5x_A 15 AWLNGEVTREQLI-GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQD--QLNVVAVHMPRSEDDLDPGKIKETAAEHDIT 91 (148)
T ss_dssp EEESCCCCHHHHT-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TSEEEEEECCCSTTTSSHHHHHHHHHHTTCC
T ss_pred ccccCcccchhhc-CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcC--CcEEEEEEcCCCccccCHHHHHHHHHHcCCC
Confidence 5677777765433 568999999999999999999999999999987 389999987531
Q ss_pred --------cc--ccCCCCCCceEEEE-eCCCcccCceeccCCCCHHHHHHHHHhcCCC
Q 013976 343 --------EH--HRAKSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNASI 389 (432)
Q Consensus 343 --------~~--~~~~i~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~ 389 (432)
.. ..+++.++|+++++ ++|..+. .+.|..+.+.|.++|++.++.
T Consensus 92 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~~l~~ 146 (148)
T 2b5x_A 92 QPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRH---FQAGGSGMKMLEKRVNRVLAE 146 (148)
T ss_dssp SCEEECSSCHHHHHTCCCCSSEEEEECTTCBEEE---EEESCSTTHHHHHHHHHHHTT
T ss_pred cceEECCchhHHHHhCCCCCCEEEEECCCCcEEE---EecCCCCHHHHHHHHHHHHhc
Confidence 11 46899999999999 6776543 677888999999999987653
No 142
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.18 E-value=1.4e-10 Score=89.10 Aligned_cols=103 Identities=19% Similarity=0.284 Sum_probs=87.6
Q ss_pred ceeecCCCchhh-hccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcE
Q 013976 152 LVTIFTRENAPS-VFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKV 229 (432)
Q Consensus 152 ~v~~l~~~~~~~-~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~ 229 (432)
.+..++.+++.. +...++++++.||++| +.|+.+.+.+.+++.++.+++.|+.+|++. ++.+++.||+.+. |+
T Consensus 3 ~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~v~~~--Pt 77 (108)
T 2trx_A 3 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQ---NPGTAPKYGIRGI--PT 77 (108)
T ss_dssp TEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTT---CTTHHHHTTCCSS--SE
T ss_pred cceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCC---CHHHHHHcCCccc--CE
Confidence 477899999985 4466778888899999 999999999999999999889999999988 5689999999988 99
Q ss_pred EEEEeCCCCceecCCCCCCHHHHHHHHHHHh
Q 013976 230 LAYTGNDDAKKHILDGELTLDKIKTFGEDFL 260 (432)
Q Consensus 230 i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~ 260 (432)
++++..+ .....+.|..+.+.|.+|+++.+
T Consensus 78 ~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 78 LLLFKNG-EVAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp EEEEETT-EEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEEeCC-EEEEEEecCCCHHHHHHHHHHhh
Confidence 9888433 33455678899999999999875
No 143
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.17 E-value=1.2e-10 Score=93.45 Aligned_cols=98 Identities=18% Similarity=0.344 Sum_probs=76.1
Q ss_pred EEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCc-------------------
Q 013976 282 KIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN------------------- 342 (432)
Q Consensus 282 ~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~------------------- 342 (432)
..++++.+.-.. -.+++++|.||++||++|+.+.+.+.+++..+. ++.++.++++.+
T Consensus 10 ~~~~g~~~~l~~-~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 85 (136)
T 1lu4_A 10 TTLSGAPFDGAS-LQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP---AVTFVGIATRADVGAMQSFVSKYNLNFTNLN 85 (136)
T ss_dssp EBTTSCEEEGGG-GTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSCHHHHHHHHHHHTCCSEEEE
T ss_pred ecCCCCeecHHH-hCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC---CcEEEEEEcCCCHHHHHHHHHHcCCCceEEE
Confidence 333444443322 246899999999999999999999999999997 589999998762
Q ss_pred ---cc--ccCCCCCCceEEEE-eCCCcccCceecc---CCCCHHHHHHHHHhcC
Q 013976 343 ---EH--HRAKSDGFPTILFF-PAGNKSFDPINVD---VDRTVVALYKFLKKNA 387 (432)
Q Consensus 343 ---~~--~~~~i~~~P~i~~~-~~g~~~~~~~~y~---g~~~~~~l~~fi~~~~ 387 (432)
.. ..+++.++|+++++ ++|..+ .+. |..+.+.|.++|++.+
T Consensus 86 d~~~~~~~~~~i~~~P~~~lid~~G~i~----~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 86 DADGVIWARYNVPWQPAFVFYRADGTST----FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp CTTSHHHHHTTCCSSSEEEEECTTSCEE----EECCSSSCCCHHHHHHHHHHC-
T ss_pred CCchhHHHhcCCCCCCEEEEECCCCcEE----EEEcCCCccCHHHHHHHHHHHh
Confidence 22 46899999999999 455432 677 8899999999999865
No 144
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.17 E-value=6e-11 Score=91.75 Aligned_cols=104 Identities=17% Similarity=0.316 Sum_probs=89.8
Q ss_pred ceeecCCCchhhhc-cCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcE
Q 013976 152 LVTIFTRENAPSVF-ESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKV 229 (432)
Q Consensus 152 ~v~~l~~~~~~~~~-~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~ 229 (432)
.+..++.+++...+ ..++++++.||++| +.|+.+.+.+.++++++.+++.|+.+|++. ++.+++.|++.+. |+
T Consensus 5 ~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~---~~~l~~~~~v~~~--Pt 79 (111)
T 3gnj_A 5 SLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEE---EKTLFQRFSLKGV--PQ 79 (111)
T ss_dssp CSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTT---CHHHHHHTTCCSS--CE
T ss_pred cceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCc---ChhHHHhcCCCcC--CE
Confidence 46778899998877 67778889999999 999999999999999999899999999998 5689999999988 99
Q ss_pred EEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 230 LAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 230 i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
++++.++. ....+.|..+.+.|.+|+++++.
T Consensus 80 ~~~~~~g~-~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 80 ILYFKDGE-YKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp EEEEETTE-EEEEEESSCCHHHHHHHHHHHHH
T ss_pred EEEEECCE-EEEEEeccCCHHHHHHHHHHHhc
Confidence 98885442 34457788999999999998764
No 145
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.17 E-value=6.9e-11 Score=90.42 Aligned_cols=102 Identities=18% Similarity=0.186 Sum_probs=87.9
Q ss_pred eeecCCCchhhhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEE
Q 013976 153 VTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLA 231 (432)
Q Consensus 153 v~~l~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~ 231 (432)
+.+++.+++......++++++.||++| +.|+.+.+.+.++++++.+++.|+.+|++. ++.+++.||+.+. |+++
T Consensus 2 v~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~---~~~~~~~~~v~~~--Pt~~ 76 (105)
T 1nsw_A 2 TMTLTDANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDE---NPETTSQFGIMSI--PTLI 76 (105)
T ss_dssp CEEECTTTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTT---CHHHHHHTTCCSS--SEEE
T ss_pred ceeccHHhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcC---CHHHHHHcCCccc--cEEE
Confidence 567899999988888888889999999 999999999999999999889999999988 5689999999988 9999
Q ss_pred EEeCCCCceecCCCCCCHHHHHHHHHHHh
Q 013976 232 YTGNDDAKKHILDGELTLDKIKTFGEDFL 260 (432)
Q Consensus 232 i~~~~~~~~y~~~~~~~~~~i~~fi~~~~ 260 (432)
++.++ .....+.|..+.+.+.+|+++++
T Consensus 77 ~~~~G-~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 77 LFKGG-RPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp EEETT-EEEEEEESCCCHHHHHHHTTTTT
T ss_pred EEeCC-eEEEEEecCCCHHHHHHHHHHHh
Confidence 88443 33455678899999999998764
No 146
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=99.17 E-value=6.4e-12 Score=107.66 Aligned_cols=115 Identities=15% Similarity=0.264 Sum_probs=84.2
Q ss_pred chhhhhCCCCCCCcEEEEEeCCCCceecCC-CCCCHHHHHHHHHHHhcCCcCccccCCCCCCCCCCceEEEecccchhhh
Q 013976 215 PVSEYFGITGEAPKVLAYTGNDDAKKHILD-GELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIV 293 (432)
Q Consensus 215 ~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~-~~~~~~~i~~fi~~~~~g~l~~~~~se~~p~~~~~~v~~l~~~~~~~~~ 293 (432)
...+.+|+++. |++++ + .+|... +.++.+++..|+++++. +.+++.|+++|..... ...+.+|..+.
T Consensus 41 ~~a~~~gi~gv--P~fvi--n---gk~~~~~~~~~~~~~~~f~~~~~~--l~~~L~s~~~p~~~~~---~~~g~~y~~l~ 108 (197)
T 1un2_A 41 KAAADVQLRGV--PAMFV--N---GKYQLNPQGMDTSNMDVFVQQYAD--TVKYLSEKKGGGTGAQ---YEDGKQYTTLE 108 (197)
T ss_dssp HHHHHTTCCSS--SEEEE--T---TTEEECGGGSCCSSHHHHHHHHHH--HHHHHTC------------CCBTTTEEECS
T ss_pred HHHHHcCCCcC--CEEEE--c---ceEecCccccccccHHHHHHHHHH--HHHHHHhCcccccccc---cCCCCCceEcc
Confidence 45788999987 99966 1 234443 35677889999999988 8899999988875432 34677777654
Q ss_pred h-cCCCcEEEEEeCCCChhhhhhHHHH---HHHHHHhcCCCCEEEEEEeCCCcc
Q 013976 294 L-DESKDVLLEIYAPWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTTNE 343 (432)
Q Consensus 294 ~-~~~~~~lv~f~~~~c~~c~~~~~~~---~~la~~~~~~~~~~~~~id~~~~~ 343 (432)
. ...+++||.||+.||+||+.+.|.| .++++.+.+ ++.|.++++..+.
T Consensus 109 ~p~~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~--~v~~~~~~v~~~~ 160 (197)
T 1un2_A 109 KPVAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPE--GVKMTKYHVNFMG 160 (197)
T ss_dssp SCCTTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCT--TCCEEEEECSSSS
T ss_pred CCCCCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCC--CCEEEEeccCcCC
Confidence 3 3357899999999999999999999 999999876 7999999988763
No 147
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.16 E-value=8.4e-11 Score=95.77 Aligned_cols=88 Identities=14% Similarity=0.192 Sum_probs=63.4
Q ss_pred cCCCcEEEEEeCCCChhhhhhHHHHHHHHH---HhcCCCCEEEEEEeCCCccc-ccCCCCCCceEEEEe-CCCcccCcee
Q 013976 295 DESKDVLLEIYAPWCGHCQAFEPTYNKLAK---HLRGVDSIVIAKMDGTTNEH-HRAKSDGFPTILFFP-AGNKSFDPIN 369 (432)
Q Consensus 295 ~~~~~~lv~f~~~~c~~c~~~~~~~~~la~---~~~~~~~~~~~~id~~~~~~-~~~~i~~~P~i~~~~-~g~~~~~~~~ 369 (432)
..+++++|.|||+||++|+.+.|.+.+... ..+. ++..+.+|.+..+. ..+++.++||+++|. +|+.+. +
T Consensus 42 ~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~--~fv~V~vD~e~~~~~~~~~v~~~PT~~f~~~~G~~v~---~ 116 (151)
T 3ph9_A 42 KSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQN--KFIMLNLMHETTDKNLSPDGQYVPRIMFVDPSLTVRA---D 116 (151)
T ss_dssp HHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHH--TCEEEEESSCCSCGGGCTTCCCSSEEEEECTTSCBCT---T
T ss_pred HcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhc--CeEEEEecCCchhhHhhcCCCCCCEEEEECCCCCEEE---E
Confidence 457999999999999999999999987532 2221 35555555322222 578999999999997 887765 4
Q ss_pred ccCC----------CCHHHHHHHHHhcC
Q 013976 370 VDVD----------RTVVALYKFLKKNA 387 (432)
Q Consensus 370 y~g~----------~~~~~l~~fi~~~~ 387 (432)
..|. .+...+++.|++.+
T Consensus 117 ~~G~~~~~~~~~~~~~~~~ll~~~~~al 144 (151)
T 3ph9_A 117 IAGRYSNRLYTYEPRDLPLLIENMKKAL 144 (151)
T ss_dssp CCCSCTTSTTCCCGGGHHHHHHHHHHHH
T ss_pred EeCCcCCcccccchhhHHHHHHHHHHHH
Confidence 4554 45677777777654
No 148
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.16 E-value=1.7e-10 Score=92.38 Aligned_cols=108 Identities=19% Similarity=0.184 Sum_probs=92.6
Q ss_pred CceeecCCCchhhhc-cCCCcceEEEEEeC-cchhhhHHHHHHHHHhcc----CceEEEEEecCCcccccchhhhhCCCC
Q 013976 151 PLVTIFTRENAPSVF-ESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFK----GKLIFVYVQMDNEDVGKPVSEYFGITG 224 (432)
Q Consensus 151 p~v~~l~~~~~~~~~-~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~----~~i~f~~vd~~~~~~~~~l~~~~~i~~ 224 (432)
..+..++.+++...+ ..++++++.||++| +.|+.+.+.+.+++.++. +++.|+.+|++. ++.+++.|++..
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~---~~~l~~~~~v~~ 83 (133)
T 1x5d_A 7 GDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATV---NQVLASRYGIRG 83 (133)
T ss_dssp CSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTT---CCHHHHHHTCCS
T ss_pred CcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCC---CHHHHHhCCCCe
Confidence 457889999998764 56677888899999 999999999999999998 789999999998 568999999998
Q ss_pred CCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcCCc
Q 013976 225 EAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKL 264 (432)
Q Consensus 225 ~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g~l 264 (432)
. |+++++..+. ....+.|..+.+.|.+|+.+.+....
T Consensus 84 ~--Pt~~~~~~g~-~~~~~~G~~~~~~l~~~l~~~~~~~~ 120 (133)
T 1x5d_A 84 F--PTIKIFQKGE-SPVDYDGGRTRSDIVSRALDLFSDNA 120 (133)
T ss_dssp S--SEEEEEETTE-EEEEECSCCSHHHHHHHHHHHHHHHS
T ss_pred e--CeEEEEeCCC-ceEEecCCCCHHHHHHHHHHHhhccC
Confidence 8 9999997743 45667899999999999999987543
No 149
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.16 E-value=1.9e-10 Score=89.40 Aligned_cols=106 Identities=16% Similarity=0.242 Sum_probs=89.6
Q ss_pred CceeecCCCchhhh-ccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCc
Q 013976 151 PLVTIFTRENAPSV-FESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPK 228 (432)
Q Consensus 151 p~v~~l~~~~~~~~-~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P 228 (432)
..+..++.+++... ...+++++++||++| +.|+.+.+.+.+++..+.+++.|+.+|++. ++.+++.||+... |
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~---~~~~~~~~~v~~~--P 81 (115)
T 1thx_A 7 KGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDP---NPTTVKKYKVEGV--P 81 (115)
T ss_dssp CSEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTT---CHHHHHHTTCCSS--S
T ss_pred CceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCC---CHHHHHHcCCCce--e
Confidence 45788999999865 456778888999999 999999999999999999889999999998 5689999999988 9
Q ss_pred EEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcC
Q 013976 229 VLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 262 (432)
Q Consensus 229 ~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g 262 (432)
+++++.++ .....+.|..+.+.+.+|++.++++
T Consensus 82 t~~~~~~G-~~~~~~~g~~~~~~l~~~l~~~l~~ 114 (115)
T 1thx_A 82 ALRLVKGE-QILDSTEGVISKDKLLSFLDTHLNN 114 (115)
T ss_dssp EEEEEETT-EEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred EEEEEcCC-EEEEEecCCCCHHHHHHHHHHHhcC
Confidence 99988433 3445567889999999999998753
No 150
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.16 E-value=2.8e-11 Score=98.05 Aligned_cols=109 Identities=16% Similarity=0.203 Sum_probs=93.4
Q ss_pred CCceeecCCCchh-hhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCC
Q 013976 150 LPLVTIFTRENAP-SVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAP 227 (432)
Q Consensus 150 ~p~v~~l~~~~~~-~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~ 227 (432)
.+.+..++.+++. .+...++++++.||++| +.|+.+.+.|.+++.++.+++.|+.+|++. .+.+++.|++.+.
T Consensus 5 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~---~~~l~~~~~v~~~-- 79 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIAT---NPWTAEKYGVQGT-- 79 (140)
T ss_dssp TTTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTT---CHHHHHHHTCCEE--
T ss_pred CcceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCc---CHhHHHHCCCCcC--
Confidence 3568889999998 56677778889999999 999999999999999999999999999998 5689999999988
Q ss_pred cEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcCCc
Q 013976 228 KVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKL 264 (432)
Q Consensus 228 P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g~l 264 (432)
|+++++.++ .....+.|..+.+.|.+|++.++....
T Consensus 80 Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~l~~~~ 115 (140)
T 3hz4_A 80 PTFKFFCHG-RPVWEQVGQIYPSILKNAVRDMLQHGE 115 (140)
T ss_dssp SEEEEEETT-EEEEEEESSCCHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCC-cEEEEEcCCCCHHHHHHHHHHHhcccc
Confidence 999988544 244567888999999999999986443
No 151
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.15 E-value=9.9e-11 Score=90.06 Aligned_cols=103 Identities=16% Similarity=0.179 Sum_probs=88.9
Q ss_pred eeecCCCchhhhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEE
Q 013976 153 VTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLA 231 (432)
Q Consensus 153 v~~l~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~ 231 (432)
+.+++.+++......+++++++||++| +.|+.+.+.+.+++..+.+++.|+.+|++. ++.+++.|++.+. |+++
T Consensus 3 v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~v~~~--Pt~~ 77 (109)
T 2yzu_A 3 PIEVTDQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDE---NPKTAMRYRVMSI--PTVI 77 (109)
T ss_dssp CEECCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTT---CHHHHHHTTCCSS--SEEE
T ss_pred ceEccHhHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCC---CHhHHHhCCCCcC--CEEE
Confidence 678899999988888888889999999 999999999999999999889999999988 5689999999988 9998
Q ss_pred EEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 232 YTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 232 i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
++.++ .....+.|..+.+.+.+|+.+.+.
T Consensus 78 ~~~~g-~~~~~~~g~~~~~~l~~~l~~~l~ 106 (109)
T 2yzu_A 78 LFKDG-QPVEVLVGAQPKRNYQAKIEKHLP 106 (109)
T ss_dssp EEETT-EEEEEEESCCCHHHHHHHHHTTC-
T ss_pred EEeCC-cEeeeEeCCCCHHHHHHHHHHHhh
Confidence 88443 334456788999999999998765
No 152
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.15 E-value=4.4e-11 Score=99.63 Aligned_cols=89 Identities=18% Similarity=0.326 Sum_probs=69.0
Q ss_pred cCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc---ccCCC--CCCceEEEE-eCCCcccCce
Q 013976 295 DESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH---HRAKS--DGFPTILFF-PAGNKSFDPI 368 (432)
Q Consensus 295 ~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~---~~~~i--~~~P~i~~~-~~g~~~~~~~ 368 (432)
..++++||.||++||++|+.+.|.|.+++..+.. ++.|+.+|++.+.. ..+.+ .++|++++| ++|+.+.
T Consensus 44 ~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~--~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~~~--- 118 (164)
T 1sen_A 44 ASGLPLMVIIHKSWCGACKALKPKFAESTEISEL--SHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGKVHP--- 118 (164)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH--HTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSCBCT---
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc--CCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCCEEE---
Confidence 4578999999999999999999999998876654 34555666655433 45666 679999999 7887764
Q ss_pred eccC----------CCCHHHHHHHHHhcCC
Q 013976 369 NVDV----------DRTVVALYKFLKKNAS 388 (432)
Q Consensus 369 ~y~g----------~~~~~~l~~fi~~~~~ 388 (432)
.+.| ..+.+.|.++|++.+.
T Consensus 119 ~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~ 148 (164)
T 1sen_A 119 EIINENGNPSYKYFYVSAEQVVQGMKEAQE 148 (164)
T ss_dssp TCCCTTSCTTSTTCCCSHHHHHHHHHHHHH
T ss_pred EEeCCCCccchhcccCCHHHHHHHHHHHHH
Confidence 4555 3789999999998764
No 153
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.15 E-value=1.5e-10 Score=93.84 Aligned_cols=105 Identities=17% Similarity=0.257 Sum_probs=87.0
Q ss_pred CceeecCCCchhhhcc------------CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchh
Q 013976 151 PLVTIFTRENAPSVFE------------SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVS 217 (432)
Q Consensus 151 p~v~~l~~~~~~~~~~------------~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~ 217 (432)
+.+..++.++|...+. .++++++.||++| ++|+.+.+.+.+++..+.+++.|+.+|++. ++.++
T Consensus 22 ~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~ 98 (141)
T 3hxs_A 22 SGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDK---EPELA 98 (141)
T ss_dssp -CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTT---CHHHH
T ss_pred CCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCC---CHHHH
Confidence 3456666666665443 3667889999999 999999999999999999999999999998 56899
Q ss_pred hhhCCCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 218 EYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 218 ~~~~i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
+.||+.+. |++++++.++ ....+.|..+.+.|.+||+.++.
T Consensus 99 ~~~~v~~~--Pt~~~~~~~g-~~~~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 99 RDFGIQSI--PTIWFVPMKG-EPQVNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp HHTTCCSS--SEEEEECSSS-CCEEEESCCCHHHHHHHHHHTTC
T ss_pred HHcCCCCc--CEEEEEeCCC-CEEEEeCCCCHHHHHHHHHHHHc
Confidence 99999988 9999986554 33467888999999999999875
No 154
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.14 E-value=1.8e-10 Score=95.86 Aligned_cols=105 Identities=18% Similarity=0.285 Sum_probs=81.8
Q ss_pred eEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccC-----------
Q 013976 281 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRA----------- 347 (432)
Q Consensus 281 v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~----------- 347 (432)
+..++++.+.-... .++++||.||++||++|+.+.+.+.+++..+++. ++.++.|+++.... ..+
T Consensus 19 l~~~~g~~~~l~~~-~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~ 96 (165)
T 3or5_A 19 GVTVDGKPFSSASL-KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASR-GFTFVGIAVNEQLPNVKNYMKTQGIIYPVM 96 (165)
T ss_dssp EECTTSCEEEGGGG-TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-TEEEEEEECSCCHHHHHHHHHHHTCCSCEE
T ss_pred eeCCCCCEechhHc-CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC-CeEEEEEECCCCHHHHHHHHHHcCCCCceE
Confidence 44445555443322 4689999999999999999999999999999874 69999999886543 233
Q ss_pred ----------------CCCCCceEEEE-eCCCcccCceeccCCCCHHHHHHHHHhcCCCC
Q 013976 348 ----------------KSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNASIP 390 (432)
Q Consensus 348 ----------------~i~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~ 390 (432)
++.++|+++++ ++|..+. .+.|..+.+.|.++|++.+...
T Consensus 97 ~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~~l~~~ 153 (165)
T 3or5_A 97 MATPELIRAFNGYIDGGITGIPTSFVIDASGNVSG---VIVGPRSKADFDRIVKMALGAK 153 (165)
T ss_dssp ECCHHHHHHHHTTSTTCSCSSSEEEEECTTSBEEE---EECSCCCHHHHHHHHHHHHC--
T ss_pred ecCHHHHHHHhhhhccCCCCCCeEEEECCCCcEEE---EEcCCCCHHHHHHHHHHHHhhh
Confidence 79999999999 6666543 7889899999999999987643
No 155
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.14 E-value=1.9e-10 Score=91.51 Aligned_cols=103 Identities=19% Similarity=0.288 Sum_probs=87.6
Q ss_pred ceeecCCCchhh-hccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcE
Q 013976 152 LVTIFTRENAPS-VFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKV 229 (432)
Q Consensus 152 ~v~~l~~~~~~~-~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~ 229 (432)
.+..++.+++.. +...++++++.||++| +.|+.+.+.+.++++.+.+++.|+.+|++. ++.+++.|++... |+
T Consensus 23 ~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~---~~~l~~~~~v~~~--Pt 97 (128)
T 2o8v_B 23 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQ---NPGTAPKYGIRGI--PT 97 (128)
T ss_dssp CSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTT---CCTTSGGGTCCSS--SE
T ss_pred ccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCC---CHHHHHHcCCCcc--CE
Confidence 367889999985 4466778889999999 999999999999999999889999999998 5689999999988 99
Q ss_pred EEEEeCCCCceecCCCCCCHHHHHHHHHHHh
Q 013976 230 LAYTGNDDAKKHILDGELTLDKIKTFGEDFL 260 (432)
Q Consensus 230 i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~ 260 (432)
++++.++ .....+.|..+.+.|.+|+++++
T Consensus 98 ~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 98 LLLFKNG-EVAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp EEEEETT-EEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEEeCC-EEEEEEcCCCCHHHHHHHHHHhh
Confidence 9988433 34455788899999999999875
No 156
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.14 E-value=3.1e-10 Score=100.17 Aligned_cols=147 Identities=12% Similarity=0.023 Sum_probs=111.6
Q ss_pred CceeecCCCchhhhccCCCcceEEEE--EeCcchhhhHHHHHHHHHhcc---CceEEEEEecCCc--ccccchhhhhCCC
Q 013976 151 PLVTIFTRENAPSVFESPIKNQLLLF--AVSNDSEKLLPVFEEAAKSFK---GKLIFVYVQMDNE--DVGKPVSEYFGIT 223 (432)
Q Consensus 151 p~v~~l~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~a~~~~---~~i~f~~vd~~~~--~~~~~l~~~~~i~ 223 (432)
+.+..++..+|..++..+.+++|.|| ++|.. +.|.|.++|..+. +++.|+.|||+.+ .-++.+|+.|+|+
T Consensus 16 ~~v~~Lt~~nF~~vi~~~~~vlV~Fy~~ApWCg---l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~V~ 92 (248)
T 2c0g_A 16 TGCVDLDELSFEKTVERFPYSVVKFDIASPYGE---KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKVD 92 (248)
T ss_dssp TTCEECCTTTHHHHHTTSSEEEEEEEESSCCSH---HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTTCC
T ss_pred CCcEECCHHHHHHHHhcCCCEEEEEECCCCCCc---cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhCCC
Confidence 45788999999998877778888899 88843 9999999999995 4799999999872 1146899999999
Q ss_pred --CCCCcEEEEEeCCC-CceecC--CCCCCHHHHHHHHHHHhcCCcCccccCCCCCCCCCCceEEEecccchhhhhcCCC
Q 013976 224 --GEAPKVLAYTGNDD-AKKHIL--DGELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESK 298 (432)
Q Consensus 224 --~~~~P~i~i~~~~~-~~~y~~--~~~~~~~~i~~fi~~~~~g~l~~~~~se~~p~~~~~~v~~l~~~~~~~~~~~~~~ 298 (432)
++ |++.++. +. .....| .|.++.+.|.+||.+..... . ..+ + +-..++.++.
T Consensus 93 ~~~~--PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~~~~-----~--~~~----g-----~i~~~d~l~~---- 149 (248)
T 2c0g_A 93 DKNF--PSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANTPLY-----I--GRD----G-----CIKEFNEVLK---- 149 (248)
T ss_dssp TTSC--CEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHSSCC-----C--CCT----T-----CCHHHHHHHT----
T ss_pred cCCC--CeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhhccc-----c--CCC----C-----chHHHHHHHH----
Confidence 77 9999997 54 235567 89999999999999976411 0 011 1 1134555442
Q ss_pred cEEEEEeCCCChhhhhhHHHHHHHHHHhc
Q 013976 299 DVLLEIYAPWCGHCQAFEPTYNKLAKHLR 327 (432)
Q Consensus 299 ~~lv~f~~~~c~~c~~~~~~~~~la~~~~ 327 (432)
.|.+.||..|..+....++++..+.
T Consensus 150 ----~f~~~~~~~~~~~~~~~~~~~~~l~ 174 (248)
T 2c0g_A 150 ----NYANIPDAEQLKLIEKLQAKQEQLT 174 (248)
T ss_dssp ----TGGGSCHHHHHHHHHHHHHHHHHCC
T ss_pred ----HHhcccchhHHHHHHHHHHHHHHcc
Confidence 2678889999888888888877763
No 157
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.14 E-value=2.5e-10 Score=91.50 Aligned_cols=101 Identities=21% Similarity=0.306 Sum_probs=77.6
Q ss_pred eEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCc------------------
Q 013976 281 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN------------------ 342 (432)
Q Consensus 281 v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~------------------ 342 (432)
+..+++..+.-... .+++++|.||++||++|+.+.+.+.+++..+. ++.++.++++.+
T Consensus 10 ~~~~~g~~~~l~~~-~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 85 (136)
T 1zzo_A 10 AKTLDGHDFHGESL-LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP---EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQ 85 (136)
T ss_dssp EEBTTSCEEEGGGG-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSCHHHHHHHHHHTTCTTSEE
T ss_pred cccCCCCEeeHHHh-CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC---CeEEEEEeCCCCHHHHHHHHHHcCCCceEE
Confidence 34444555544332 46899999999999999999999999999987 588999998642
Q ss_pred -----cc--ccCCCCCCceEEEEeCCCcccCceeccCCCCHHHHHHHHHhcCC
Q 013976 343 -----EH--HRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 388 (432)
Q Consensus 343 -----~~--~~~~i~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 388 (432)
.. ..+++.++|+++++..+..+ . .+.|..+.+.|.++|++.++
T Consensus 86 ~~d~~~~~~~~~~i~~~P~~~~id~~g~i-~--~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 86 LADTDGSVWANFGVTQQPAYAFVDPHGNV-D--VVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp EECTTCHHHHHTTCCSSSEEEEECTTCCE-E--EEESCCCHHHHHHHHHHHC-
T ss_pred EEcCCcHHHHHcCCCCCceEEEECCCCCE-E--EEecCCCHHHHHHHHHHHhc
Confidence 11 46899999999999543333 1 68899999999999998764
No 158
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.14 E-value=5.3e-11 Score=85.44 Aligned_cols=73 Identities=19% Similarity=0.295 Sum_probs=60.0
Q ss_pred EEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcccccCCCCCCceEEEEeCCCcccCceeccCCC-CHHHH
Q 013976 301 LLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKSDGFPTILFFPAGNKSFDPINVDVDR-TVVAL 379 (432)
Q Consensus 301 lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~~~~~i~~~P~i~~~~~g~~~~~~~~y~g~~-~~~~l 379 (432)
.|.||++||++|+.+.|.+.+++..+.. ++.++.+| +.....+++|.++|++++ +|+.+ +.|.. +.+.|
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~~--~~~~~~v~-~~~~~~~~~v~~~Pt~~~--~G~~~-----~~G~~~~~~~l 72 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELGI--DAEFEKIK-EMDQILEAGLTALPGLAV--DGELK-----IMGRVASKEEI 72 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTTC--CEEEEEEC-SHHHHHHHTCSSSSCEEE--TTEEE-----ECSSCCCHHHH
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcCC--ceEEEEec-CHHHHHHCCCCcCCEEEE--CCEEE-----EcCCCCCHHHH
Confidence 5889999999999999999999999986 69999999 222226899999999999 66543 33876 89999
Q ss_pred HHHH
Q 013976 380 YKFL 383 (432)
Q Consensus 380 ~~fi 383 (432)
.+||
T Consensus 73 ~~~l 76 (77)
T 1ilo_A 73 KKIL 76 (77)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 8876
No 159
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.14 E-value=2.4e-10 Score=93.40 Aligned_cols=106 Identities=19% Similarity=0.244 Sum_probs=93.1
Q ss_pred CceeecCCCchhhhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcE
Q 013976 151 PLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKV 229 (432)
Q Consensus 151 p~v~~l~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~ 229 (432)
..+..++.+++......++++++.||++| +.|+.+.+.|.+++.++.+++.|+.+|++. ++.+++.|++.+. |+
T Consensus 38 ~~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~---~~~l~~~~~v~~~--Pt 112 (148)
T 3p2a_A 38 GEVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEA---EPALSTRFRIRSI--PT 112 (148)
T ss_dssp CCCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT---CHHHHHHTTCCSS--SE
T ss_pred CCceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcC---CHHHHHHCCCCcc--CE
Confidence 35778999999988888888899999999 999999999999999999889999999998 5689999999988 99
Q ss_pred EEEEeCCCCceecCCCCCCHHHHHHHHHHHhcC
Q 013976 230 LAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 262 (432)
Q Consensus 230 i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g 262 (432)
++++.++ .....+.|..+.+.|.+|+++++.+
T Consensus 113 ~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 113 IMLYRNG-KMIDMLNGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp EEEEETT-EEEEEESSCCCHHHHHHHHHHHHHS
T ss_pred EEEEECC-eEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 9888644 3445678999999999999998864
No 160
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.13 E-value=2.5e-10 Score=87.48 Aligned_cols=102 Identities=14% Similarity=0.146 Sum_probs=86.5
Q ss_pred ceeecCCCchhhhc-cCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcE
Q 013976 152 LVTIFTRENAPSVF-ESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKV 229 (432)
Q Consensus 152 ~v~~l~~~~~~~~~-~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~ 229 (432)
.+..++.+++.... ..+++++++||++| +.|+.+.+.+.+++.++.+++.|+.+|++. ++.+++.||+... |+
T Consensus 3 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~v~~~--Pt 77 (107)
T 2i4a_A 3 HTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDD---NPETPNAYQVRSI--PT 77 (107)
T ss_dssp CEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTT---CCHHHHHTTCCSS--SE
T ss_pred ceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCC---CHHHHHhcCCCcc--CE
Confidence 47789999998654 56778888899999 999999999999999999889999999988 5689999999988 99
Q ss_pred EEEEeCCCCceecCCCCCCHHHHHHHHHHH
Q 013976 230 LAYTGNDDAKKHILDGELTLDKIKTFGEDF 259 (432)
Q Consensus 230 i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~ 259 (432)
++++.++ .....+.|..+.+.|.+|++++
T Consensus 78 ~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 78 LMLVRDG-KVIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp EEEEETT-EEEEEEESCCCHHHHHHHHHHT
T ss_pred EEEEeCC-EEEEEecCCCCHHHHHHHHHhc
Confidence 9988433 3344567889999999999875
No 161
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.13 E-value=1.7e-10 Score=94.65 Aligned_cols=93 Identities=17% Similarity=0.313 Sum_probs=76.0
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc----------------------c--ccCCCCC
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE----------------------H--HRAKSDG 351 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~----------------------~--~~~~i~~ 351 (432)
.++++||.||++||++|+.+.+.+.+++..+.+. ++.++.|+++... . ..+++.+
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~-~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 103 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQ-GVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSP 103 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG-TEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC-CeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCC
Confidence 4689999999999999999999999999999863 6889999886531 1 4689999
Q ss_pred CceEEEE-eCCCcccCceeccCCCCHHHHHHHHHhcCCCCCc
Q 013976 352 FPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNASIPFK 392 (432)
Q Consensus 352 ~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~~~ 392 (432)
+|+++++ ++|..+. .+.|..+.+.|.++|++.+.....
T Consensus 104 ~P~~~lid~~G~i~~---~~~G~~~~~~l~~~l~~ll~~~~~ 142 (151)
T 2f9s_A 104 LPTTFLINPEGKVVK---VVTGTMTESMIHDYMNLIKPGETS 142 (151)
T ss_dssp SCEEEEECTTSEEEE---EEESCCCHHHHHHHHHHHSCC---
T ss_pred CCeEEEECCCCcEEE---EEeCCCCHHHHHHHHHHHHhhhhc
Confidence 9999999 6676553 677888999999999998765443
No 162
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.13 E-value=1.8e-10 Score=87.72 Aligned_cols=102 Identities=16% Similarity=0.197 Sum_probs=87.8
Q ss_pred eeecCCCchhhhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEE
Q 013976 153 VTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLA 231 (432)
Q Consensus 153 v~~l~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~ 231 (432)
|.+++.+++......++++++.||++| +.|+.+.+.+.+++..+.+ +.|+.+|++. ++.+++.|++... |+++
T Consensus 1 V~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~---~~~~~~~~~v~~~--Pt~~ 74 (104)
T 2e0q_A 1 VIHLDSKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDE---NPDIAARYGVMSL--PTVI 74 (104)
T ss_dssp CEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTT---CHHHHHHTTCCSS--CEEE
T ss_pred CeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCC---CHHHHHhCCcccc--CEEE
Confidence 457889999988887878889999999 9999999999999999988 9999999988 5689999999988 9999
Q ss_pred EEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 232 YTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 232 i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
++.++ .....+.|..+.+.+.+|++++++
T Consensus 75 ~~~~g-~~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 75 FFKDG-EPVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp EEETT-EEEEEEESCCCHHHHHHHHHHHHT
T ss_pred EEECC-eEhhhccCCCCHHHHHHHHHHHhc
Confidence 88443 334556788999999999998764
No 163
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.12 E-value=1.7e-10 Score=94.66 Aligned_cols=91 Identities=16% Similarity=0.234 Sum_probs=74.5
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--------------------------ccCC-
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--------------------------HRAK- 348 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--------------------------~~~~- 348 (432)
.++++||.||++||++|+.+.|.+.+++..+++. ++.++.|+++.... ..++
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~-~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKG-SVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGN 101 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTT-TEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC-CeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCC
Confidence 4689999999999999999999999999999653 79999999863111 3466
Q ss_pred -CCCCceEEEE-eCCCcccCceeccCCCCHHHHHHHHHhcCCCC
Q 013976 349 -SDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNASIP 390 (432)
Q Consensus 349 -i~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~ 390 (432)
+.++|+++++ ++|..+. .+.|..+.+.|.++|++..+..
T Consensus 102 ~v~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~l~~~~ 142 (151)
T 3raz_A 102 TVGVLPFTVVEAPKCGYRQ---TITGEVNEKSLTDAVKLAHSKC 142 (151)
T ss_dssp CSCCSSEEEEEETTTTEEE---ECCSCCCHHHHHHHHHHHHTC-
T ss_pred ccCCCCEEEEECCCCcEEE---EECCCCCHHHHHHHHHHHHHHh
Confidence 9999999999 6666554 7889999999999999876543
No 164
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.12 E-value=6.2e-10 Score=87.45 Aligned_cols=105 Identities=15% Similarity=0.198 Sum_probs=87.6
Q ss_pred CCceeecCCCchhhhc-cCCCcceEEEEEeC-cchhhhHHHHHHHHHhccC-----ceEEEEEecCCcccccchhhhhCC
Q 013976 150 LPLVTIFTRENAPSVF-ESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKG-----KLIFVYVQMDNEDVGKPVSEYFGI 222 (432)
Q Consensus 150 ~p~v~~l~~~~~~~~~-~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~-----~i~f~~vd~~~~~~~~~l~~~~~i 222 (432)
.+.+..++.+++...+ ..++++++.||++| ++|+.+.+.|.++++++.+ .+.|+.+|++... +++ ++
T Consensus 6 ~~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~----~~~--~v 79 (121)
T 2djj_A 6 EGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND----VPD--EI 79 (121)
T ss_dssp SCSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC----CSS--CC
T ss_pred CCCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc----ccc--cc
Confidence 3457889999998874 66778899999999 9999999999999999987 7999999998742 454 88
Q ss_pred CCCCCcEEEEEeCCCCc-eecCCCCCCHHHHHHHHHHHhcC
Q 013976 223 TGEAPKVLAYTGNDDAK-KHILDGELTLDKIKTFGEDFLEG 262 (432)
Q Consensus 223 ~~~~~P~i~i~~~~~~~-~y~~~~~~~~~~i~~fi~~~~~g 262 (432)
... |+++++..++.. ...+.|..+.+.|.+|+.+.++.
T Consensus 80 ~~~--Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~~ 118 (121)
T 2djj_A 80 QGF--PTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGKY 118 (121)
T ss_dssp SSS--SEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSSS
T ss_pred CcC--CeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccCc
Confidence 887 999999766432 56788999999999999997753
No 165
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.11 E-value=1.7e-10 Score=95.05 Aligned_cols=105 Identities=12% Similarity=0.109 Sum_probs=89.9
Q ss_pred ceeecCCCchhhhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEE
Q 013976 152 LVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVL 230 (432)
Q Consensus 152 ~v~~l~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i 230 (432)
.+.+++.+++......++++++.||++| +.|+.+.+.|++++.++.+++.|+.+|++. ++.+++.|||... |++
T Consensus 48 ~~~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~---~~~l~~~~~i~~~--Pt~ 122 (155)
T 2ppt_A 48 KVAGIDPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQA---HPAVAGRHRIQGI--PAF 122 (155)
T ss_dssp SEEECCHHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTT---STHHHHHTTCCSS--SEE
T ss_pred CCccCCHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCc---cHHHHHHcCCCcC--CEE
Confidence 3677888888887777778899999999 999999999999999999889999999998 5689999999988 999
Q ss_pred EEEeCCCCceecCCCCCCHHHHHHHHHHHhcC
Q 013976 231 AYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 262 (432)
Q Consensus 231 ~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g 262 (432)
+++.++ .....+.|..+.+.|.+|++++++.
T Consensus 123 ~~~~~G-~~~~~~~G~~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 123 ILFHKG-RELARAAGARPASELVGFVRGKLGA 153 (155)
T ss_dssp EEEETT-EEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred EEEeCC-eEEEEecCCCCHHHHHHHHHHHhcc
Confidence 988543 3345577889999999999998763
No 166
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.11 E-value=3.2e-10 Score=88.84 Aligned_cols=105 Identities=14% Similarity=0.220 Sum_probs=90.4
Q ss_pred ceeecCCCchhhhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhcc---CceEEEEEecCCcccccchhhhhCCCCCCC
Q 013976 152 LVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFK---GKLIFVYVQMDNEDVGKPVSEYFGITGEAP 227 (432)
Q Consensus 152 ~v~~l~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~---~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~ 227 (432)
.+..++.+++......+++++++||++| +.|+.+.+.+.+++..+. ..+.|+.+|+.. .+.+++.|++.+.
T Consensus 8 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~---~~~~~~~~~v~~~-- 82 (120)
T 1mek_A 8 HVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATE---ESDLAQQYGVRGY-- 82 (120)
T ss_dssp TEEECCTTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTT---CCSSHHHHTCCSS--
T ss_pred CcEEechhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCC---CHHHHHHCCCCcc--
Confidence 4788999999988888888899999999 999999999999999997 369999999988 5589999999988
Q ss_pred cEEEEEeCCCC-ceecCCCCCCHHHHHHHHHHHhc
Q 013976 228 KVLAYTGNDDA-KKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 228 P~i~i~~~~~~-~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
|+++++.++.. ....+.|..+.+.|.+|+++.++
T Consensus 83 Pt~~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~ 117 (120)
T 1mek_A 83 PTIKFFRNGDTASPKEYTAGREADDIVNWLKKRTG 117 (120)
T ss_dssp SEEEEEESSCSSSCEECCCCSSHHHHHHHHHTTSC
T ss_pred cEEEEEeCCCcCCcccccCccCHHHHHHHHHhccC
Confidence 99998865532 12677899999999999998765
No 167
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.10 E-value=3.8e-10 Score=89.43 Aligned_cols=108 Identities=18% Similarity=0.131 Sum_probs=91.3
Q ss_pred CCceeecCCCchhhhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccC-ceEEEEEecCCcccccchhhhhCCCCCCC
Q 013976 150 LPLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNEDVGKPVSEYFGITGEAP 227 (432)
Q Consensus 150 ~p~v~~l~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~-~i~f~~vd~~~~~~~~~l~~~~~i~~~~~ 227 (432)
...+..++.+++..++.. ++++.||++| +.|+.+.+.+.++++.+.+ .+.|+.+|++. +..+++.|++...
T Consensus 6 ~~~v~~l~~~~f~~~~~~--~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~---~~~~~~~~~v~~~-- 78 (126)
T 1x5e_A 6 SGNVRVITDENWRELLEG--DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTE---QPGLSGRFIINAL-- 78 (126)
T ss_dssp CCSEEECCTTTHHHHTSS--EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTT---CHHHHHHTTCCSS--
T ss_pred CCccEEecHHHHHHHhCC--CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcC---CHHHHHHcCCccc--
Confidence 345888999999987654 4788899999 9999999999999999986 79999999987 5689999999988
Q ss_pred cEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcCCcCc
Q 013976 228 KVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKLKP 266 (432)
Q Consensus 228 P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g~l~~ 266 (432)
|+++++.++ +...+.|..+.+.|.+|+++.+...+.+
T Consensus 79 Pt~~~~~~G--~~~~~~G~~~~~~l~~~l~~~~~~~~~~ 115 (126)
T 1x5e_A 79 PTIYHCKDG--EFRRYQGPRTKKDFINFISDKEWKSIEP 115 (126)
T ss_dssp SEEEEEETT--EEEECCSCCCHHHHHHHHHTCGGGGSCE
T ss_pred CEEEEEeCC--eEEEeecCCCHHHHHHHHHHHhhccCCC
Confidence 999988544 3567889999999999999988655544
No 168
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.10 E-value=4e-10 Score=90.23 Aligned_cols=109 Identities=11% Similarity=0.252 Sum_probs=90.7
Q ss_pred CCceeecCCCchhhhcc-CCCcceEEEEEeC-cchhhhHHHHHHHHHhcc--CceEEEEEecCCcccccchhhhhCCCCC
Q 013976 150 LPLVTIFTRENAPSVFE-SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFK--GKLIFVYVQMDNEDVGKPVSEYFGITGE 225 (432)
Q Consensus 150 ~p~v~~l~~~~~~~~~~-~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~--~~i~f~~vd~~~~~~~~~l~~~~~i~~~ 225 (432)
.+.+..++.+++...+. .++++++.||++| +.|+.+.+.|.+++.++. +.+.|+.+|++. +..+++.|++...
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~---~~~~~~~~~v~~~ 82 (133)
T 2dj3_A 6 SGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATA---NDITNDQYKVEGF 82 (133)
T ss_dssp SCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTT---SCCCCSSCCCSSS
T ss_pred CCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCc---CHHHHhhcCCCcC
Confidence 45688899999988765 4677888899999 999999999999999998 569999999987 4577888999988
Q ss_pred CCcEEEEEeCCCC-ceecCC-CCCCHHHHHHHHHHHhcCC
Q 013976 226 APKVLAYTGNDDA-KKHILD-GELTLDKIKTFGEDFLEGK 263 (432)
Q Consensus 226 ~~P~i~i~~~~~~-~~y~~~-~~~~~~~i~~fi~~~~~g~ 263 (432)
|+++++..+.. ....+. |..+.+.|.+|+...+...
T Consensus 83 --Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~~ 120 (133)
T 2dj3_A 83 --PTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATKR 120 (133)
T ss_dssp --SEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSSC
T ss_pred --CEEEEEeCCCcccceEecCCCcCHHHHHHHHHHhcccc
Confidence 99999876543 233566 5689999999999998654
No 169
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.10 E-value=5.8e-11 Score=98.71 Aligned_cols=65 Identities=18% Similarity=0.247 Sum_probs=55.7
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCC---CCCCceEEEEeCCCc
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAK---SDGFPTILFFPAGNK 363 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~---i~~~P~i~~~~~g~~ 363 (432)
.+++++|.|||+||++|+.+.|.+.+++..+. ++.|..+|.+.+.. ..+. +.++||+++|.+|..
T Consensus 53 ~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~---~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~~~G~ 122 (167)
T 1z6n_A 53 ERRYRLLVAGEMWCPDCQINLAALDFAQRLQP---NIELAIISKGRAEDDLRQRLALERIAIPLVLVLDEEFN 122 (167)
T ss_dssp CSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT---TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEECTTCC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHCC---CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEECCCCC
Confidence 45789999999999999999999999998774 59999999887765 4565 999999999988643
No 170
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.10 E-value=2.2e-10 Score=89.85 Aligned_cols=104 Identities=13% Similarity=0.144 Sum_probs=88.0
Q ss_pred CceeecCCCchhhh-ccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCc
Q 013976 151 PLVTIFTRENAPSV-FESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPK 228 (432)
Q Consensus 151 p~v~~l~~~~~~~~-~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P 228 (432)
+.+..++.++|... ...+++.++.||++| +.|+.+.+.+.+++.++.+++.|+.+|++. +..+++.|++.+. |
T Consensus 13 ~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~---~~~l~~~~~v~~~--P 87 (119)
T 1w4v_A 13 TTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDD---HTDLAIEYEVSAV--P 87 (119)
T ss_dssp SEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTT---THHHHHHTTCCSS--S
T ss_pred eEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCC---CHHHHHHcCCCcc--c
Confidence 46788888888774 456777888899999 999999999999999998889999999987 5689999999988 9
Q ss_pred EEEEEeCCCCceecCCCCCCHHHHHHHHHHHh
Q 013976 229 VLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 260 (432)
Q Consensus 229 ~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~ 260 (432)
+++++.++ .....+.|..+.+.|.+|+++++
T Consensus 88 t~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 88 TVLAMKNG-DVVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp EEEEEETT-EEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEEEeCC-cEEEEEcCCCCHHHHHHHHHHHh
Confidence 99888433 34456778889999999999875
No 171
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.10 E-value=2.4e-10 Score=92.75 Aligned_cols=85 Identities=13% Similarity=0.261 Sum_probs=72.0
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCC-------------------------ccc--ccCC
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-------------------------NEH--HRAK 348 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~-------------------------~~~--~~~~ 348 (432)
.++++||.||++||++|+.+.+.+.+++..+... ++.++.|+++. +.. ..++
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 111 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSD-SVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYH 111 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCS-SEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCC-CEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcC
Confidence 5689999999999999999999999999999843 69999999864 111 5789
Q ss_pred CCCCceEEEE-eCCCcccCceeccCCCCHHHHHHHHH
Q 013976 349 SDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLK 384 (432)
Q Consensus 349 i~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~ 384 (432)
+.++|+++++ ++|..+. .+.|..+.+.|.++|+
T Consensus 112 v~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~ 145 (145)
T 3erw_A 112 IITIPTSFLLNEKGEIEK---TKIGPMTAEQLKEWTE 145 (145)
T ss_dssp CCEESEEEEECTTCCEEE---EEESCCCHHHHHHHHC
T ss_pred cCccCeEEEEcCCCcEEE---EEcCCcCHHHHHHhhC
Confidence 9999999999 6776554 7889999999998873
No 172
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.09 E-value=6.9e-10 Score=110.08 Aligned_cols=176 Identities=14% Similarity=0.107 Sum_probs=123.5
Q ss_pred cceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEEEEeCCCCceecCCCCCC
Q 013976 170 KNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELT 248 (432)
Q Consensus 170 ~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~~~ 248 (432)
++.+.+|.+. +.|+++...++++|.. .+++.+...| . . . ...|++.+...+......|-|-..
T Consensus 20 ~v~l~~~~~~~~~~~~~~~~~~~~~~~-s~~i~~~~~~--~---~-~---------~~~p~~~~~~~~~~~~i~f~g~p~ 83 (521)
T 1hyu_A 20 PVELIATLDDSAKSAEIKELLAEIAEL-SDKVTFKEDN--T---L-P---------VRKPSFLITNPGSQQGPRFAGSPL 83 (521)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHHHHTT-CTTEEEEECT--T---S-S---------SCSSEEEEECTTCCCSCEEESCCC
T ss_pred CEEEEEEeCCCcchHHHHHHHHHHHHh-CCceEEEEcC--C---c-c---------cCCCEEEEecCCCcceEEEeccCc
Confidence 5556666665 5677888888887655 4567764321 1 0 0 234999888655434455667666
Q ss_pred HHHHHHHHHHHhcCCcCccccCCCCCCCCCCceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcC
Q 013976 249 LDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRG 328 (432)
Q Consensus 249 ~~~i~~fi~~~~~g~l~~~~~se~~p~~~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~ 328 (432)
-.++..|+..+++-.-. -..++.+.++....-.....++.||++||++|+.+.|.+++++..+.
T Consensus 84 g~e~~s~~~~l~~~~~~---------------~~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~- 147 (521)
T 1hyu_A 84 GHEFTSLVLALLWTGGH---------------PSKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP- 147 (521)
T ss_dssp GGGHHHHHHHHHHHTTC---------------CCCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-
T ss_pred chhHHHHHHHHHhhcCC---------------CCCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC-
Confidence 66777777776541111 12244455555432234667999999999999999999999998875
Q ss_pred CCCEEEEEEeCCCccc--ccCCCCCCceEEEEeCCCcccCceeccCCCCHHHHHHHHHhc
Q 013976 329 VDSIVIAKMDGTTNEH--HRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKN 386 (432)
Q Consensus 329 ~~~~~~~~id~~~~~~--~~~~i~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~ 386 (432)
++.+..+|.+.+.. .+++|.++|++++ +|+.+ ..|..+.+.|.+|+...
T Consensus 148 --~v~~~~vd~~~~~~~~~~~~i~svPt~~i--~g~~~-----~~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 148 --RIKHTAIDGGTFQNEITERNVMGVPAVFV--NGKEF-----GQGRMTLTEIVAKVDTG 198 (521)
T ss_dssp --TEEEEEEETTTCHHHHHHTTCCSSSEEEE--TTEEE-----EESCCCHHHHHHHHCCS
T ss_pred --ceEEEEEechhhHHHHHHhCCCccCEEEE--CCEEE-----ecCCCCHHHHHHHHhhc
Confidence 59999999998877 6899999999977 66543 44889999999998765
No 173
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.09 E-value=3.8e-10 Score=90.80 Aligned_cols=106 Identities=17% Similarity=0.276 Sum_probs=86.6
Q ss_pred ceeecCCCchhhhcc------------CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhh
Q 013976 152 LVTIFTRENAPSVFE------------SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSE 218 (432)
Q Consensus 152 ~v~~l~~~~~~~~~~------------~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~ 218 (432)
.+..++.++|...+. .++++++.||++| +.|+.+.+.+.+++.++.+++.|+.+|++. +..+++
T Consensus 10 ~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~---~~~l~~ 86 (136)
T 2l5l_A 10 KVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEK---EQELAG 86 (136)
T ss_dssp SEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTT---CHHHHH
T ss_pred ceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCC---CHHHHH
Confidence 355666666665443 4567888999999 999999999999999999889999999998 568999
Q ss_pred hhCCCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcCC
Q 013976 219 YFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGK 263 (432)
Q Consensus 219 ~~~i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g~ 263 (432)
.|++... |++++++.++ +...+.|..+.+.|.+|+++.+...
T Consensus 87 ~~~v~~~--Pt~~~~~~~G-~~~~~~G~~~~~~l~~~l~~~~~~~ 128 (136)
T 2l5l_A 87 AFGIRSI--PSILFIPMEG-KPEMAQGAMPKASFKKAIDEFLLKK 128 (136)
T ss_dssp HTTCCSS--CEEEEECSSS-CCEEEESCCCHHHHHHHHHHHHTSC
T ss_pred HcCCCCC--CEEEEECCCC-cEEEEeCCCCHHHHHHHHHHHhhcc
Confidence 9999988 9999985443 2335678899999999999987643
No 174
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.09 E-value=6.8e-10 Score=94.46 Aligned_cols=138 Identities=15% Similarity=0.231 Sum_probs=94.8
Q ss_pred CHHHHHHHHHHHhcCCcCccccCCCCCCCCCCceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhc
Q 013976 248 TLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLR 327 (432)
Q Consensus 248 ~~~~i~~fi~~~~~g~l~~~~~se~~p~~~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~ 327 (432)
...++.+|+..+..|.+...........-.+-.+..++++.+.-.- -.++++||.||++||++|....+.+.++...++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~f~l~~~~G~~~~l~~-~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~ 90 (186)
T 1jfu_A 12 AAVATAQKIAPLAHGEVAALTMASAPLKLPDLAFEDADGKPKKLSD-FRGKTLLVNLWATWCVPCRKEMPALDELQGKLS 90 (186)
T ss_dssp HHHHHHHHHGGGCCGGGTTCEECCSCCBCCCCEEECTTSCEEEGGG-GTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhhhcchhhcchhhhhccccCCCcCCCcEeEcCCCCEeeHHH-cCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhc
Confidence 3457889999999998876655332221112223333343332211 146899999999999999999999999999998
Q ss_pred CCCCEEEEEEeCCCccc-------ccCCCC-----------------------CCceEEEE-eCCCcccCceeccCCC--
Q 013976 328 GVDSIVIAKMDGTTNEH-------HRAKSD-----------------------GFPTILFF-PAGNKSFDPINVDVDR-- 374 (432)
Q Consensus 328 ~~~~~~~~~id~~~~~~-------~~~~i~-----------------------~~P~i~~~-~~g~~~~~~~~y~g~~-- 374 (432)
+. ++.++.|+++..+. .++++. ++|+++++ ++|+.+. .+.|..
T Consensus 91 ~~-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i~~---~~~g~~~~ 166 (186)
T 1jfu_A 91 GP-NFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEIA---TIAGPAEW 166 (186)
T ss_dssp BT-TEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTTCCSSSSEEEEECTTSBEEE---EEESCCCT
T ss_pred cC-CcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccccccCCCCEEEEECCCCCEEE---EEecCCcc
Confidence 42 79999999886521 234443 89999999 6666543 567755
Q ss_pred CHHHHHHHHHhcCCCC
Q 013976 375 TVVALYKFLKKNASIP 390 (432)
Q Consensus 375 ~~~~l~~fi~~~~~~~ 390 (432)
+.+.|.++|++.+..+
T Consensus 167 ~~~~l~~~l~~ll~~~ 182 (186)
T 1jfu_A 167 ASEDALKLIRAATGKA 182 (186)
T ss_dssp TSHHHHHHHHHHHC--
T ss_pred CHHHHHHHHHHHhccc
Confidence 4789999999887643
No 175
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.09 E-value=2e-10 Score=89.65 Aligned_cols=102 Identities=13% Similarity=0.213 Sum_probs=85.8
Q ss_pred CceeecCCCchhhhcc--CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCC
Q 013976 151 PLVTIFTRENAPSVFE--SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAP 227 (432)
Q Consensus 151 p~v~~l~~~~~~~~~~--~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~ 227 (432)
+.....+.++|...+. .++++++.||++| +.|+.+.+.+.++++++.+ +.|+.+|++. ++.+++.||+.+.
T Consensus 12 ~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~---~~~l~~~~~v~~~-- 85 (116)
T 3qfa_C 12 SVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDD---CQDVASECEVKSM-- 85 (116)
T ss_dssp CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTT---THHHHHHTTCCSS--
T ss_pred cccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCC---CHHHHHHcCCccc--
Confidence 4566677788888776 6778889999999 9999999999999999988 9999999998 5689999999998
Q ss_pred cEEEEEeCCCCceecCCCCCCHHHHHHHHHHHh
Q 013976 228 KVLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 260 (432)
Q Consensus 228 P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~ 260 (432)
|+++++.++ .....+.|. +.+.|.+|+++++
T Consensus 86 Pt~~~~~~G-~~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 86 PTFQFFKKG-QKVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp SEEEEESSS-SEEEEEESC-CHHHHHHHHHHHC
T ss_pred cEEEEEeCC-eEEEEEcCC-CHHHHHHHHHHhC
Confidence 999888443 344456787 9999999998763
No 176
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.09 E-value=1.9e-10 Score=95.68 Aligned_cols=105 Identities=12% Similarity=0.184 Sum_probs=80.7
Q ss_pred ceEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCC------------------
Q 013976 280 DVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT------------------ 341 (432)
Q Consensus 280 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~------------------ 341 (432)
.+..++++.+.... ..++++||.||++||++|+.+.|.|.+++..++.. ++.++.|+++.
T Consensus 22 ~l~~~~g~~~~~~~-~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~~~~~~~~~~~~~~~~~~~~~ 99 (164)
T 2h30_A 22 TMKTADNRPASVYL-KKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFS-SANLITVASPGFLHEKKDGEFQKWYAGLN 99 (164)
T ss_dssp TCEETTSSBGGGGC-CTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGT-TSEEEEEECTTSTTCCCTTHHHHHHTTSC
T ss_pred ccCCCCCCEeeHHH-hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccC-CcEEEEEEcCCCccccCHHHHHHHHHhCC
Confidence 45666777666533 34689999999999999999999999999988653 56666666431
Q ss_pred ----------ccc--ccCCCCCCceEEEE-eCCCcccCceeccCCCCHHHHHHHHHhcCCC
Q 013976 342 ----------NEH--HRAKSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNASI 389 (432)
Q Consensus 342 ----------~~~--~~~~i~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~ 389 (432)
+.. ..+++.++|+++++ ++|..+. .+.|..+.+.|.++|++....
T Consensus 100 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~i~~~~~~ 157 (164)
T 2h30_A 100 YPKLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQR---IVKGSINEAQALALIRNPNAD 157 (164)
T ss_dssp CTTSCEEECTTCHHHHHTTCCSSSEEEEECTTSCEEE---EEESCCCHHHHHHHHHCTTCC
T ss_pred CCcceEEEcCchHHHHHcCCCccceEEEECCCCcEEE---EEcCCCCHHHHHHHHHHHHHH
Confidence 111 35799999999999 6776653 678989999999999988764
No 177
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.09 E-value=6.5e-10 Score=88.08 Aligned_cols=106 Identities=8% Similarity=0.067 Sum_probs=87.6
Q ss_pred ceeecCCCchh-----hhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEe--cCCcccccchhhhhCCC
Q 013976 152 LVTIFTRENAP-----SVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQ--MDNEDVGKPVSEYFGIT 223 (432)
Q Consensus 152 ~v~~l~~~~~~-----~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd--~~~~~~~~~l~~~~~i~ 223 (432)
.+..++..++. .....++++++.||++| +.|+.+.+.+.++++++.+.+.|+.+| ++. +..+++.||+.
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~---~~~~~~~~~v~ 81 (126)
T 2l57_A 5 GIKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEK---NIDLAYKYDAN 81 (126)
T ss_dssp CSSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSH---HHHHHHHTTCC
T ss_pred ccCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCc---hHHHHHHcCCc
Confidence 34556666666 45566778889999999 999999999999999998889999999 766 56889999999
Q ss_pred CCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcC
Q 013976 224 GEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 262 (432)
Q Consensus 224 ~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g 262 (432)
+. |++++++.++.....+.|..+.+.|.+|+++.+..
T Consensus 82 ~~--Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 118 (126)
T 2l57_A 82 IV--PTTVFLDKEGNKFYVHQGLMRKNNIETILNSLGVK 118 (126)
T ss_dssp SS--SEEEEECTTCCEEEEEESCCCHHHHHHHHHHHCCC
T ss_pred ce--eEEEEECCCCCEEEEecCCCCHHHHHHHHHHHhcc
Confidence 88 99999975544555678889999999999998753
No 178
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.08 E-value=3.4e-10 Score=91.60 Aligned_cols=106 Identities=18% Similarity=0.214 Sum_probs=77.1
Q ss_pred CceeecCCCchhhhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcE
Q 013976 151 PLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKV 229 (432)
Q Consensus 151 p~v~~l~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~ 229 (432)
+.+.+++.+++......+..+++.||++| +.|+.+.+.+.+++.++.+++.|+.+|++. +..+++.|++... |+
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~---~~~l~~~~~v~~~--Pt 107 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDE---HPGLAARYGVRSV--PT 107 (140)
T ss_dssp ----------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTT---CHHHHHHTTCCSS--SE
T ss_pred CccccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCC---CHHHHHHCCCCcc--CE
Confidence 45677888888877655545788899999 999999999999999999889999999998 5689999999988 99
Q ss_pred EEEEeCCCCceecCCCCCCHHHHHHHHHHHhcC
Q 013976 230 LAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 262 (432)
Q Consensus 230 i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g 262 (432)
++++.++. ....+.|..+.+.|.+|+++++.|
T Consensus 108 ~~~~~~G~-~~~~~~G~~~~~~l~~~i~~~l~~ 139 (140)
T 1v98_A 108 LVLFRRGA-PVATWVGASPRRVLEERLRPYLEG 139 (140)
T ss_dssp EEEEETTE-EEEEEESCCCHHHHHHHHHHHHTC
T ss_pred EEEEeCCc-EEEEEeCCCCHHHHHHHHHHHHcc
Confidence 98885432 345577889999999999998875
No 179
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.08 E-value=1.8e-10 Score=90.92 Aligned_cols=103 Identities=19% Similarity=0.284 Sum_probs=81.1
Q ss_pred ceeecCCCchhh-hccCCCcceEEEEEeC-c--------------chhhhHHHHHHHHHhccCceEEEEEecCCcccccc
Q 013976 152 LVTIFTRENAPS-VFESPIKNQLLLFAVS-N--------------DSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKP 215 (432)
Q Consensus 152 ~v~~l~~~~~~~-~~~~~~~~~i~~~~~~-~--------------~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~ 215 (432)
.+.+++.+++.. +...++++++.||++| + +|+.+.+.+.+++.++.+++.|+.+|++. ++.
T Consensus 4 ~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~---~~~ 80 (123)
T 1oaz_A 4 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQ---NPG 80 (123)
T ss_dssp SCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTS---CTT
T ss_pred ccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCC---CHH
Confidence 467889999975 4567778889999999 9 99999999999999999889999999998 568
Q ss_pred hhhhhCCCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHh
Q 013976 216 VSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 260 (432)
Q Consensus 216 l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~ 260 (432)
+++.||+.+. |+++++.++ .....+.|..+.+.+.+|++..+
T Consensus 81 l~~~~~v~~~--Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 81 TAPKYGIRGI--PTLLLFKNG-EVAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp TGGGGTCCBS--SEEEEEESS-SEEEEEESCCCHHHHHHHHTTTC
T ss_pred HHHHcCCCcc--CEEEEEECC-EEEEEEeCCCCHHHHHHHHHHHh
Confidence 9999999998 999988443 34455788899999999998754
No 180
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.08 E-value=3.8e-10 Score=86.54 Aligned_cols=102 Identities=21% Similarity=0.246 Sum_probs=85.5
Q ss_pred eeecCCCchhhhc-cCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEE
Q 013976 153 VTIFTRENAPSVF-ESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVL 230 (432)
Q Consensus 153 v~~l~~~~~~~~~-~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i 230 (432)
+..++.+++.... ..++++++.||++| +.|+.+.+.+.+++.++.+++.|+.+|++. ++.+++.||+.+. |++
T Consensus 3 v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~v~~~--Pt~ 77 (107)
T 1dby_A 3 AGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDE---SPNVASEYGIRSI--PTI 77 (107)
T ss_dssp CEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT---CHHHHHHHTCCSS--CEE
T ss_pred cEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCC---CHHHHHHCCCCcC--CEE
Confidence 4567888887744 56677788899999 999999999999999999889999999987 5689999999988 999
Q ss_pred EEEeCCCCceecCCCCCCHHHHHHHHHHHh
Q 013976 231 AYTGNDDAKKHILDGELTLDKIKTFGEDFL 260 (432)
Q Consensus 231 ~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~ 260 (432)
+++.++ .....+.|..+.+.+.+++++++
T Consensus 78 ~~~~~G-~~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 78 MVFKGG-KKCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp EEESSS-SEEEEEESCCCHHHHHHHHHHHC
T ss_pred EEEeCC-EEEEEEeCCCCHHHHHHHHHHHh
Confidence 888433 34456778899999999999875
No 181
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.07 E-value=6e-10 Score=86.20 Aligned_cols=104 Identities=15% Similarity=0.199 Sum_probs=87.8
Q ss_pred ceeecCCCchhh-hccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcE
Q 013976 152 LVTIFTRENAPS-VFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKV 229 (432)
Q Consensus 152 ~v~~l~~~~~~~-~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~ 229 (432)
.+..++.+++.. +...++++++.||++| +.|+.+.+.+.+++.++.+++.|+.+|++. ++.+++.||+.+. |+
T Consensus 6 ~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~v~~~--Pt 80 (112)
T 1t00_A 6 TLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDE---NPGTAAKYGVMSI--PT 80 (112)
T ss_dssp CCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT---CHHHHHHTTCCSS--SE
T ss_pred eEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCC---CHHHHHhCCCCcc--cE
Confidence 467889999865 4456777888899999 999999999999999998889999999988 5689999999988 99
Q ss_pred EEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 230 LAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 230 i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
++++.++ .....+.|..+.+.+.+|++++++
T Consensus 81 ~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 81 LNVYQGG-EVAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp EEEEETT-EEEEEEESCCCHHHHHHHTHHHHC
T ss_pred EEEEeCC-EEEEEEeCCCCHHHHHHHHHHHhh
Confidence 9888543 344567788999999999998764
No 182
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.07 E-value=3.9e-10 Score=86.27 Aligned_cols=97 Identities=8% Similarity=0.054 Sum_probs=72.6
Q ss_pred CCCchhhhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEEEEeC
Q 013976 157 TRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGN 235 (432)
Q Consensus 157 ~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~~ 235 (432)
+.+++...+..++++++.||++| ++|+.+.+.+.+++.++. ++.|+.+|++. ++.+++.|++.+. |+++++.+
T Consensus 7 ~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~~~---~~~l~~~~~v~~~--Pt~~~~~~ 80 (105)
T 4euy_A 7 TIEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN-YVEKIEILLQD---MQEIAGRYAVFTG--PTVLLFYN 80 (105)
T ss_dssp ---CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT-TEEEEEEEECC---C---------CCC--CEEEEEET
T ss_pred CHHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC-CceEEEEECCC---CHHHHHhcCCCCC--CEEEEEeC
Confidence 45677777777888899999999 999999999999999995 59999999998 5689999999988 99998864
Q ss_pred CCCceecCCCCCCHHHHHHHHHHHh
Q 013976 236 DDAKKHILDGELTLDKIKTFGEDFL 260 (432)
Q Consensus 236 ~~~~~y~~~~~~~~~~i~~fi~~~~ 260 (432)
+ .....+.|..+.+.|.+++++++
T Consensus 81 G-~~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 81 G-KEILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp T-EEEEEEESSCCHHHHHHHHHTTC
T ss_pred C-eEEEEEeCCcCHHHHHHHHHHhh
Confidence 4 23455678899999999998764
No 183
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.06 E-value=7e-10 Score=89.82 Aligned_cols=87 Identities=17% Similarity=0.364 Sum_probs=68.6
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHH---HHHHhcCCCCEEEEEEeCCCccc--------------------------cc
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNK---LAKHLRGVDSIVIAKMDGTTNEH--------------------------HR 346 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~---la~~~~~~~~~~~~~id~~~~~~--------------------------~~ 346 (432)
.++++||.||++||++|+...|.+.+ +...+++. ++.++.|+++.+.. ..
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 104 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENG-TLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQL 104 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHT-SEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccC-CeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHH
Confidence 46899999999999999999999998 88888753 69999998875432 27
Q ss_pred CCCCCCceEEEEeCCCcccCceeccCCCCHHHHHHHHHhcCC
Q 013976 347 AKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 388 (432)
Q Consensus 347 ~~i~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 388 (432)
+++.++|+++++..+..+ .+ +..+.+.|.++|+++.+
T Consensus 105 ~~v~~~P~~~lid~~G~i----~~-~~~~~~~l~~~l~~~~~ 141 (142)
T 3ewl_A 105 YDIRATPTIYLLDGRKRV----IL-KDTSMEQLIDYLATQAG 141 (142)
T ss_dssp SCCCSSSEEEEECTTCBE----EE-CSCCHHHHHHHHHC---
T ss_pred cCCCCCCeEEEECCCCCE----Ee-cCCCHHHHHHHHHHHcc
Confidence 899999999999443332 33 56889999999998754
No 184
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.06 E-value=4e-10 Score=88.51 Aligned_cols=106 Identities=14% Similarity=0.102 Sum_probs=88.7
Q ss_pred CCceeecCCCchhh-hccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCC
Q 013976 150 LPLVTIFTRENAPS-VFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAP 227 (432)
Q Consensus 150 ~p~v~~l~~~~~~~-~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~ 227 (432)
...+..++.+++.. +...+++++++||++| +.|+.+.+.+.+++.++.+++.|+.+|++. ++.+++.|++...
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~i~~~-- 85 (121)
T 2i1u_A 11 KSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDT---NPETARNFQVVSI-- 85 (121)
T ss_dssp -CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT---CHHHHHHTTCCSS--
T ss_pred cccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCC---CHHHHHhcCCCcC--
Confidence 44578899999975 4466778888899999 999999999999999998889999999987 5689999999988
Q ss_pred cEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 228 KVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 228 P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
|+++++.++ .....+.|..+.+.|.+|++.+++
T Consensus 86 Pt~~~~~~g-~~~~~~~G~~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 86 PTLILFKDG-QPVKRIVGAKGKAALLRELSDVVP 118 (121)
T ss_dssp SEEEEEETT-EEEEEEESCCCHHHHHHHTCSCCC
T ss_pred CEEEEEECC-EEEEEecCCCCHHHHHHHHHHHHh
Confidence 999888643 234557888999999999988764
No 185
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.06 E-value=6.1e-10 Score=84.98 Aligned_cols=102 Identities=18% Similarity=0.263 Sum_probs=85.1
Q ss_pred eeecCCCchhhhc-cCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEE
Q 013976 153 VTIFTRENAPSVF-ESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVL 230 (432)
Q Consensus 153 v~~l~~~~~~~~~-~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i 230 (432)
+..++.+++.... ..+++.+++||++| +.|+.+.+.+.+++.++.+++.|+.+|++. ++.+++.|++.+. |++
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~v~~~--Pt~ 76 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDE---APGIATQYNIRSI--PTV 76 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT---CHHHHHHTTCCSS--SEE
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcc---hHHHHHhCCCCcc--cEE
Confidence 4578888988754 45667788899999 999999999999999999889999999987 5689999999988 999
Q ss_pred EEEeCCCCceecCCCCCCHHHHHHHHHHHh
Q 013976 231 AYTGNDDAKKHILDGELTLDKIKTFGEDFL 260 (432)
Q Consensus 231 ~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~ 260 (432)
+++.++ .....+.|..+.+.+.+++++++
T Consensus 77 ~~~~~g-~~~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 77 LFFKNG-ERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp EEEETT-EEEEEEEECCCHHHHHHHHHHHC
T ss_pred EEEeCC-eEEEEEecCCCHHHHHHHHHhhC
Confidence 888543 23445678899999999998763
No 186
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.05 E-value=2.2e-10 Score=90.25 Aligned_cols=104 Identities=18% Similarity=0.109 Sum_probs=87.1
Q ss_pred ceeecCCCchh-hhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcE
Q 013976 152 LVTIFTRENAP-SVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKV 229 (432)
Q Consensus 152 ~v~~l~~~~~~-~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~ 229 (432)
.+..++.+++. .+...++++++.||++| +.|+.+.+.+.+++.++.+++.|+.+|++. ++.+++.|++.+. |+
T Consensus 4 ~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~---~~~~~~~~~v~~~--Pt 78 (122)
T 3aps_A 4 ASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQA---YPQTCQKAGIKAY--PS 78 (122)
T ss_dssp CSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTT---CHHHHHHTTCCSS--SE
T ss_pred chhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcC---CHHHHHHcCCCcc--ce
Confidence 36778888884 46677778889999999 999999999999999999889999999998 5689999999988 99
Q ss_pred EEEEeCCCCceecCCCC----CCHHHHHHHHHHHhc
Q 013976 230 LAYTGNDDAKKHILDGE----LTLDKIKTFGEDFLE 261 (432)
Q Consensus 230 i~i~~~~~~~~y~~~~~----~~~~~i~~fi~~~~~ 261 (432)
+++++.+.. ...+.|. .+.+.|.+|++..+.
T Consensus 79 ~~~~~~~~~-~~~~~g~~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 79 VKLYQYERA-KKSIWEEQINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp EEEEEEEGG-GTEEEEEEECCSCHHHHHHHHHHHHH
T ss_pred EEEEeCCCc-cceeeccccCcCCHHHHHHHHHHHHH
Confidence 998865542 3334443 799999999999876
No 187
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.05 E-value=3.7e-10 Score=92.86 Aligned_cols=86 Identities=19% Similarity=0.222 Sum_probs=71.8
Q ss_pred CcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCC---------------------------Cccc--ccCC
Q 013976 298 KDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT---------------------------TNEH--HRAK 348 (432)
Q Consensus 298 ~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~---------------------------~~~~--~~~~ 348 (432)
+++||.||++||++|+.+.+.+.+++..+ ++.++.|+++ .+.. ..++
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~----~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 106 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET----GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFK 106 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH----CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSS
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc----CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhC
Confidence 89999999999999999999999999999 3777778872 1111 5789
Q ss_pred CCCCceEEEE-eCCCcccCceeccCCCCHHHHHHHHHhcCCCC
Q 013976 349 SDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNASIP 390 (432)
Q Consensus 349 i~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~ 390 (432)
+.++|+++++ ++|+.+. .+.|..+.+.|.++|+++.+..
T Consensus 107 v~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~~~~~~ 146 (154)
T 3ia1_A 107 VLGQPWTFVVDREGKVVA---LFAGRAGREALLDALLLAGADL 146 (154)
T ss_dssp BCSSCEEEEECTTSEEEE---EEESBCCHHHHHHHHHHTTCCC
T ss_pred CCcccEEEEECCCCCEEE---EEcCCCCHHHHHHHHHhccCcc
Confidence 9999999888 6676554 7888999999999999997654
No 188
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.05 E-value=9.9e-10 Score=96.32 Aligned_cols=109 Identities=19% Similarity=0.285 Sum_probs=94.5
Q ss_pred CCceeecCCCchhh-hccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCC
Q 013976 150 LPLVTIFTRENAPS-VFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAP 227 (432)
Q Consensus 150 ~p~v~~l~~~~~~~-~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~ 227 (432)
.+.+..++.++|.. +...++++++.||++| +.|+.+.+.|.++++++.+++.|+.+|++. ++.+++.|++.+.
T Consensus 11 ~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~---~~~l~~~~~v~~~-- 85 (222)
T 3dxb_A 11 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQ---NPGTAPKYGIRGI-- 85 (222)
T ss_dssp SCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT---CTTTGGGGTCCSB--
T ss_pred CCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCC---CHHHHHHcCCCcC--
Confidence 45688999999987 5677778899999999 999999999999999999999999999998 5689999999988
Q ss_pred cEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcCCc
Q 013976 228 KVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKL 264 (432)
Q Consensus 228 P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g~l 264 (432)
|+++++..+. ....+.|..+.+.|.+|++..+.+..
T Consensus 86 Pt~~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l~~~~ 121 (222)
T 3dxb_A 86 PTLLLFKNGE-VAATKVGALSKGQLKEFLDANLAGSA 121 (222)
T ss_dssp SEEEEEETTE-EEEEEESCCCHHHHHHHHHHHSCCSC
T ss_pred CEEEEEECCe-EEEEeccccChHHHHHHHHhhccccc
Confidence 9999886442 34466788999999999999987654
No 189
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.05 E-value=3.9e-10 Score=86.11 Aligned_cols=94 Identities=18% Similarity=0.260 Sum_probs=76.2
Q ss_pred CCchhhhcc--CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEEEEe
Q 013976 158 RENAPSVFE--SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTG 234 (432)
Q Consensus 158 ~~~~~~~~~--~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~ 234 (432)
.++|...+. .++++++.||++| ++|+.+.+.+.+++..+.+ +.|+.+|+++ ++++++.|||++. |+++++.
T Consensus 8 ~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~vd~d~---~~~l~~~~~V~~~--PT~~~~~ 81 (105)
T 3zzx_A 8 QEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD-VVFLKVDVDE---CEDIAQDNQIACM--PTFLFMK 81 (105)
T ss_dssp HHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEETTT---CHHHHHHTTCCBS--SEEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC-eEEEEEeccc---CHHHHHHcCCCee--cEEEEEE
Confidence 356666553 2456677799999 9999999999999999876 8999999988 6799999999998 9999886
Q ss_pred CCCCceecCCCCCCHHHHHHHHHHH
Q 013976 235 NDDAKKHILDGELTLDKIKTFGEDF 259 (432)
Q Consensus 235 ~~~~~~y~~~~~~~~~~i~~fi~~~ 259 (432)
++. ....+.| .+.+.|.+||+++
T Consensus 82 ~G~-~v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 82 NGQ-KLDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp TTE-EEEEEES-CCHHHHHHHHHHH
T ss_pred CCE-EEEEEeC-cCHHHHHHHHHhc
Confidence 543 3344567 6899999999874
No 190
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.04 E-value=5.9e-10 Score=88.09 Aligned_cols=103 Identities=14% Similarity=0.133 Sum_probs=87.8
Q ss_pred eeecCCCchhhhccCCC-cceEEEEEeC---cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCc
Q 013976 153 VTIFTRENAPSVFESPI-KNQLLLFAVS---NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPK 228 (432)
Q Consensus 153 v~~l~~~~~~~~~~~~~-~~~i~~~~~~---~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P 228 (432)
+..++.++|+..+.... ++++.|+++| ++|+.+.+.+.++|.+|.+++.|+.||.++ ++.+...|||.+. |
T Consensus 17 ~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe---~~~la~~ygV~si--P 91 (137)
T 2qsi_A 17 PTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEA---ERGLMARFGVAVC--P 91 (137)
T ss_dssp CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGG---HHHHHHHHTCCSS--S
T ss_pred CcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCC---CHHHHHHcCCccC--C
Confidence 34788999988765555 7788888977 689999999999999999999999999988 6799999999998 9
Q ss_pred EEEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 229 VLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 229 ~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
+++++.+++ ..-...|..+.+.|.++|+.++.
T Consensus 92 TlilFkdG~-~v~~~vG~~~k~~l~~~l~~~l~ 123 (137)
T 2qsi_A 92 SLAVVQPER-TLGVIAKIQDWSSYLAQIGAMLA 123 (137)
T ss_dssp EEEEEECCE-EEEEEESCCCHHHHHHHHHHHHH
T ss_pred EEEEEECCE-EEEEEeCCCCHHHHHHHHHHHhc
Confidence 999997664 33456788999999999999874
No 191
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.04 E-value=5.9e-10 Score=91.37 Aligned_cols=91 Identities=15% Similarity=0.344 Sum_probs=76.3
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc------------------------c-ccCCCC
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE------------------------H-HRAKSD 350 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~------------------------~-~~~~i~ 350 (432)
.++++||.||++||++|+.+.+.+.++...+.+. ++.++.|+++.+. . ..+++.
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 107 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGK-DIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLIN 107 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTS-SEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCC
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccC-CeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcC
Confidence 3589999999999999999999999999999763 6999999988763 1 468999
Q ss_pred CCceEEEEe-CCCcccCceeccCCCCHHHHHHHHHhcCCCC
Q 013976 351 GFPTILFFP-AGNKSFDPINVDVDRTVVALYKFLKKNASIP 390 (432)
Q Consensus 351 ~~P~i~~~~-~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~ 390 (432)
++|+++++. +|..+. .+.|..+.+.|.++|++..+..
T Consensus 108 ~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~~~~~~ 145 (152)
T 2lja_A 108 GIPRFILLDRDGKIIS---ANMTRPSDPKTAEKFNELLGLE 145 (152)
T ss_dssp SSCCEEEECTTSCEEE---SSCCCTTCHHHHHHHHHHHTCC
T ss_pred CCCEEEEECCCCeEEE---ccCCCCCHHHHHHHHHHHhccc
Confidence 999999996 666553 5678889999999999887643
No 192
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.04 E-value=6.6e-10 Score=96.58 Aligned_cols=109 Identities=14% Similarity=0.183 Sum_probs=94.5
Q ss_pred CCceeecCCCchhhhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCc
Q 013976 150 LPLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPK 228 (432)
Q Consensus 150 ~p~v~~l~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P 228 (432)
.+.+..++.+++......+++++|.||++| +.|+.+.+.|.+++.++.+++.|+.||++. ++.+++.||+.+. |
T Consensus 96 ~~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~---~~~l~~~~~v~~~--P 170 (210)
T 3apq_A 96 DPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGD---DRMLCRMKGVNSY--P 170 (210)
T ss_dssp CTTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTT---CHHHHHHTTCCSS--S
T ss_pred CCceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCc---cHHHHHHcCCCcC--C
Confidence 345778888899887778888899999999 999999999999999999999999999998 5689999999988 9
Q ss_pred EEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcCCc
Q 013976 229 VLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKL 264 (432)
Q Consensus 229 ~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g~l 264 (432)
+++++..+ .....+.|..+.+.|.+|+.+.++..+
T Consensus 171 t~~~~~~G-~~~~~~~G~~~~~~l~~~i~~~l~~~~ 205 (210)
T 3apq_A 171 SLFIFRSG-MAAVKYNGDRSKESLVAFAMQHVRSTV 205 (210)
T ss_dssp EEEEECTT-SCCEECCSCCCHHHHHHHHHHHHHCCS
T ss_pred eEEEEECC-CceeEecCCCCHHHHHHHHHHhCcccc
Confidence 99988443 345667899999999999999987544
No 193
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.03 E-value=9.3e-10 Score=84.87 Aligned_cols=102 Identities=17% Similarity=0.167 Sum_probs=87.1
Q ss_pred CceeecCCCchhhhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhcc---CceEEEEEecCCcccccchhhhhCCCCCC
Q 013976 151 PLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFK---GKLIFVYVQMDNEDVGKPVSEYFGITGEA 226 (432)
Q Consensus 151 p~v~~l~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~---~~i~f~~vd~~~~~~~~~l~~~~~i~~~~ 226 (432)
..+..++.+++...+. ++++++.||++| +.|+.+.+.+.++++++. ..+.|+.+|++. .+.+++.|++...
T Consensus 5 ~~v~~l~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~---~~~l~~~~~v~~~- 79 (111)
T 3uvt_A 5 STVLALTENNFDDTIA-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTA---ERNICSKYSVRGY- 79 (111)
T ss_dssp CCSEECCTTTHHHHHH-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTT---CHHHHHHTTCCSS-
T ss_pred CcceEcChhhHHHHhc-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccc---cHhHHHhcCCCcc-
Confidence 3578899999998877 568888899999 999999999999999986 469999999998 5689999999988
Q ss_pred CcEEEEEeCCCCceecCCCCCCHHHHHHHHHHH
Q 013976 227 PKVLAYTGNDDAKKHILDGELTLDKIKTFGEDF 259 (432)
Q Consensus 227 ~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~ 259 (432)
|+++++.++. ....+.|..+.+.|.+|+.+.
T Consensus 80 -Pt~~~~~~g~-~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 80 -PTLLLFRGGK-KVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp -SEEEEEETTE-EEEEECSCCSHHHHHHHHHHH
T ss_pred -cEEEEEeCCc-EEEeccCCcCHHHHHHHHHhc
Confidence 9998885443 445678999999999999863
No 194
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.03 E-value=2e-10 Score=87.11 Aligned_cols=75 Identities=13% Similarity=0.146 Sum_probs=64.4
Q ss_pred cEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEEEEeCCCcccCceeccCCCCH
Q 013976 299 DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFFPAGNKSFDPINVDVDRTV 376 (432)
Q Consensus 299 ~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~~~~~g~~~~~~~~y~g~~~~ 376 (432)
..|++|+++||++|+.+.+.+++++..+. +.+..+|+++++. .++++. +|++++|.+|+.+ +.|..+.
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~----i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~~v-----~~g~~~~ 99 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW----FELEVINIDGNEHLTRLYNDR-VPVLFAVNEDKEL-----CHYFLDS 99 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC----CCCEEEETTTCHHHHHHSTTS-CSEEEETTTTEEE-----ECSSCCC
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC----CeEEEEECCCCHHHHHHhCCC-CceEEEEECCEEE-----EecCCCH
Confidence 57999999999999999999999998863 7888999997766 578887 9999999988653 4577899
Q ss_pred HHHHHHH
Q 013976 377 VALYKFL 383 (432)
Q Consensus 377 ~~l~~fi 383 (432)
+.|.+||
T Consensus 100 ~~L~~~L 106 (107)
T 2fgx_A 100 DVIGAYL 106 (107)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999887
No 195
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.03 E-value=1.8e-10 Score=84.24 Aligned_cols=74 Identities=11% Similarity=0.041 Sum_probs=59.7
Q ss_pred EEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--ccCCCCCCceEEEEeCCCcccCceeccCCCCHHH
Q 013976 301 LLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVA 378 (432)
Q Consensus 301 lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~~~i~~~P~i~~~~~g~~~~~~~~y~g~~~~~~ 378 (432)
+++||++||++|+.+.|.+++++..+ +..+|+++++. .++++. +|++++ .+|+.+ . |..+.+.
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-------~~~vdid~~~~l~~~~g~~-vPtl~~-~~G~~v----~--g~~~~~~ 67 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-------FFSVFIDDDAALESAYGLR-VPVLRD-PMGREL----D--WPFDAPR 67 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-------EEEEECTTCHHHHHHHTTT-CSEEEC-TTCCEE----E--SCCCHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-------eEEEECCCCHHHHHHhCCC-cCeEEE-ECCEEE----e--CCCCHHH
Confidence 78999999999999999998874322 67899998776 578998 999998 766543 2 7889999
Q ss_pred HHHHHHhcCCC
Q 013976 379 LYKFLKKNASI 389 (432)
Q Consensus 379 l~~fi~~~~~~ 389 (432)
|.++|.+.+..
T Consensus 68 L~~~l~~~~~~ 78 (87)
T 1ttz_A 68 LRAWLDAAPHA 78 (87)
T ss_dssp HHHHHHTCC--
T ss_pred HHHHHHHHHHH
Confidence 99999987653
No 196
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.03 E-value=5.9e-10 Score=88.62 Aligned_cols=103 Identities=11% Similarity=0.106 Sum_probs=84.7
Q ss_pred CCceeecCCCchhhhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCc
Q 013976 150 LPLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPK 228 (432)
Q Consensus 150 ~p~v~~l~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P 228 (432)
.|.+...+.+.+......++++++.||++| +.|+.+.+.+.++++++.+++.|+.+|++. .+.+++.|++.+. |
T Consensus 24 ~~~~~~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~---~~~l~~~~~v~~~--P 98 (128)
T 3ul3_B 24 VPRLQQNGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDK---NESLARKFSVKSL--P 98 (128)
T ss_dssp --CCCCCCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGG---CHHHHHHTTCCSS--S
T ss_pred CCccccCCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCC---CHHHHHHcCCCCc--C
Confidence 444555556666666677778889999999 999999999999999999889999999998 5689999999988 9
Q ss_pred EEEEEeCCCCceecCCCCCCHHHHHHHHHH
Q 013976 229 VLAYTGNDDAKKHILDGELTLDKIKTFGED 258 (432)
Q Consensus 229 ~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~ 258 (432)
+++++.++ .....+.|..+.+.|.+|+++
T Consensus 99 t~~~~~~G-~~~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 99 TIILLKNK-TMLARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp EEEEEETT-EEEEEESSCCCHHHHHHHHTT
T ss_pred EEEEEECC-EEEEEecCCCCHHHHHHHHHh
Confidence 99988543 345567889999999999875
No 197
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.02 E-value=1.2e-09 Score=89.57 Aligned_cols=93 Identities=14% Similarity=0.190 Sum_probs=75.4
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCc-----------------------cc--ccCCCC
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN-----------------------EH--HRAKSD 350 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~-----------------------~~--~~~~i~ 350 (432)
.++++||.||++||++|+.+.+.+.+++..+.+. ++.++.++.+.. .. ..+++.
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~ 105 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNK-NFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQ 105 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGT-TEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC-CeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCC
Confidence 4689999999999999999999999999999863 688887774321 11 467999
Q ss_pred CCceEEEE-eCCCcccCceeccCCCCHHHHHHHHHhcCCCCCc
Q 013976 351 GFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNASIPFK 392 (432)
Q Consensus 351 ~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~~~ 392 (432)
++|+++++ ++|..+. .+.|..+.+.|.++|++.+.....
T Consensus 106 ~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~ll~~~~~ 145 (153)
T 2l5o_A 106 VYPTSVLIGKKGEILK---TYVGEPDFGKLYQEIDTAWRNSDA 145 (153)
T ss_dssp SSSEEEEECSSSCCCE---EEESSCCHHHHHHHHHHHHHCCSS
T ss_pred ccCeEEEECCCCcEEE---EEcCCCCHHHHHHHHHHHHHhhhh
Confidence 99999999 6676553 688999999999999988765443
No 198
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.02 E-value=8e-10 Score=88.59 Aligned_cols=86 Identities=22% Similarity=0.320 Sum_probs=70.8
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCC----------------------------ccc--c
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT----------------------------NEH--H 345 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~----------------------------~~~--~ 345 (432)
.++++||.||++||++|+.+.+.+.+++..+.. ++.++.+++.. +.. .
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 98 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGD--DYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLE 98 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT--TEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC--CcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHH
Confidence 468999999999999999999999999998655 68888885432 111 4
Q ss_pred cCCCCCCceEEEE-eCCCcccCceeccCCCCHHHHHHHHHhc
Q 013976 346 RAKSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKN 386 (432)
Q Consensus 346 ~~~i~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~ 386 (432)
.+++.++|+++++ ++|+.+. .+.|..+.+.|.++|++.
T Consensus 99 ~~~v~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 99 TYGVRSYPTQAFIDKEGKLVK---THPGFMEKDAILQTLKEL 137 (138)
T ss_dssp HTTCCSSSEEEEECTTCCEEE---EEESCCCHHHHHHHHHHC
T ss_pred HcCcccCCeEEEECCCCcEEE---eecCCCcHHHHHHHHHhh
Confidence 6899999999999 6776554 788999999999999875
No 199
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.02 E-value=1.3e-09 Score=90.19 Aligned_cols=90 Identities=17% Similarity=0.215 Sum_probs=73.9
Q ss_pred CCCcEEEEEeCCCChhhhh-hHHHHHHHHHHhcCCCCEEEEEEeCC----------------------------Cc-c--
Q 013976 296 ESKDVLLEIYAPWCGHCQA-FEPTYNKLAKHLRGVDSIVIAKMDGT----------------------------TN-E-- 343 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~-~~~~~~~la~~~~~~~~~~~~~id~~----------------------------~~-~-- 343 (432)
.++++||.||++||++|.. +.|.+.+++..+++. ++.++.|+++ .. .
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~-~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 107 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDES-QVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQ 107 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT-TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTC
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcC-CcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccc
Confidence 4689999999999999999 699999999999874 6999998863 11 1
Q ss_pred ----c-ccCCCCCCceEEEE-eCCCcccCceeccCCCCHHHHHHHHHhcCCC
Q 013976 344 ----H-HRAKSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNASI 389 (432)
Q Consensus 344 ----~-~~~~i~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~ 389 (432)
. ..+++.++|+++++ ++|+.+. .+.|..+.+.|.++|++.++.
T Consensus 108 ~~~~~~~~~~v~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~i~~ll~~ 156 (160)
T 3lor_A 108 RIPSTMKKYRLEGTPSIILADRKGRIRQ---VQFGQVDDFVLGLLLGSLLSE 156 (160)
T ss_dssp SSCHHHHHTTCCSSSEEEEECTTSBEEE---EEESCCCHHHHHHHHHHHHTC
T ss_pred hhhhHHHhcccCccceEEEECCCCcEEE---EecCcCCHHHHHHHHHHHHhc
Confidence 2 46899999999999 5666543 677999999999999988754
No 200
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.02 E-value=8.7e-10 Score=88.53 Aligned_cols=106 Identities=8% Similarity=0.045 Sum_probs=84.3
Q ss_pred eeecCC-Cchhhhc--cCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCc
Q 013976 153 VTIFTR-ENAPSVF--ESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPK 228 (432)
Q Consensus 153 v~~l~~-~~~~~~~--~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P 228 (432)
+..++. ++|+..+ ...+++++-|+++| ++|+.+.+.++++|+++.+++.|+.||+++ ++++...|+|... |
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe---~~e~a~~y~V~si--P 97 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITE---VPDFNTMYELYDP--V 97 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTT---CCTTTTTTTCCSS--E
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCC---CHHHHHHcCCCCC--C
Confidence 444444 6676554 35667888899999 999999999999999999999999999998 6799999999887 9
Q ss_pred EEEEEeCCCCce-e-------cCCCCCC-HHHHHHHHHHHhcCC
Q 013976 229 VLAYTGNDDAKK-H-------ILDGELT-LDKIKTFGEDFLEGK 263 (432)
Q Consensus 229 ~i~i~~~~~~~~-y-------~~~~~~~-~~~i~~fi~~~~~g~ 263 (432)
+++++.+++... - ...|... .+.|.++|+.++.|-
T Consensus 98 T~~fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r~a 141 (160)
T 2av4_A 98 SVMFFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFRGA 141 (160)
T ss_dssp EEEEEETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHHHH
T ss_pred EEEEEECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHHHh
Confidence 998886553211 1 5667666 899999998887643
No 201
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.00 E-value=9.4e-10 Score=90.84 Aligned_cols=90 Identities=14% Similarity=0.177 Sum_probs=74.1
Q ss_pred CCCcEEEEEeCCCChhhhhh-HHHHHHHHHHhcCCCCEEEEEEeCCC----------------------------cc---
Q 013976 296 ESKDVLLEIYAPWCGHCQAF-EPTYNKLAKHLRGVDSIVIAKMDGTT----------------------------NE--- 343 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~-~~~~~~la~~~~~~~~~~~~~id~~~----------------------------~~--- 343 (432)
.++++||.||++||++|+.. .|.+.+++..+++. ++.++.|+++. ..
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~-~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 105 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPED-KVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGA 105 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT-TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcC-CEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchh
Confidence 46899999999999999995 99999999999863 69999988641 11
Q ss_pred ---c-ccCCCCCCceEEEE-eCCCcccCceeccCCCCHHHHHHHHHhcCCC
Q 013976 344 ---H-HRAKSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNASI 389 (432)
Q Consensus 344 ---~-~~~~i~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~ 389 (432)
. ..+++.++|+++++ ++|..+. .+.|..+.+.|.++|++.++.
T Consensus 106 ~~~~~~~~~v~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~i~~ll~~ 153 (158)
T 3eyt_A 106 MPRTMAAYQMRGTPSLLLIDKAGDLRA---HHFGDVSELLLGAEIATLLGE 153 (158)
T ss_dssp SCHHHHHTTCCSSSEEEEECTTSEEEE---EEESCCCHHHHHHHHHHHHTS
T ss_pred hHHHHHHcCCCCCCEEEEECCCCCEEE---EEeCCCCHHHHHHHHHHHhcc
Confidence 1 46899999999999 5666543 677899999999999998764
No 202
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.00 E-value=1.8e-09 Score=87.43 Aligned_cols=83 Identities=12% Similarity=0.191 Sum_probs=66.8
Q ss_pred CCcEEEEEeCCCChhhhhhHHHHHH---HHHHhcCCCCEEEEEEeCCCcc--------------------------cccC
Q 013976 297 SKDVLLEIYAPWCGHCQAFEPTYNK---LAKHLRGVDSIVIAKMDGTTNE--------------------------HHRA 347 (432)
Q Consensus 297 ~~~~lv~f~~~~c~~c~~~~~~~~~---la~~~~~~~~~~~~~id~~~~~--------------------------~~~~ 347 (432)
++++||.||++||++|+...|.+.+ +...+++. ++.++.|+.+.+. ...+
T Consensus 31 gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~-~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 109 (142)
T 3eur_A 31 AEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAK-KLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLY 109 (142)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTT-SEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCS
T ss_pred CCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccC-CeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhc
Confidence 5899999999999999999999999 99999763 7999999987651 2467
Q ss_pred CCCCCceEEEEeCCCcccCceeccCCCCHHHHHHHHHh
Q 013976 348 KSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKK 385 (432)
Q Consensus 348 ~i~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~ 385 (432)
++.++|+++++..+..+ .+.+ .+.+.|.+||++
T Consensus 110 ~v~~~P~~~lid~~G~i----~~~~-~~~~~l~~~l~e 142 (142)
T 3eur_A 110 DLRAIPTLYLLDKNKTV----LLKD-ATLQKVEQYLAE 142 (142)
T ss_dssp CCTTCSEEEEECTTCBE----EEEE-ECHHHHHHHHHC
T ss_pred CCCcCCeEEEECCCCcE----EecC-CCHHHHHHHHhC
Confidence 89999999999544443 3333 368899998864
No 203
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.00 E-value=1.5e-09 Score=88.33 Aligned_cols=86 Identities=17% Similarity=0.273 Sum_probs=70.0
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHh-cCCCCEEEEEEeCCCcc-----------------------c----ccC
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHL-RGVDSIVIAKMDGTTNE-----------------------H----HRA 347 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~-~~~~~~~~~~id~~~~~-----------------------~----~~~ 347 (432)
.++++||.||++||++|+.+.|.+.+++..+ .+ .++.++.++++... . ..+
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKN-KNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQY 110 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTC-TTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-CCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhc
Confidence 4689999999999999999999999999999 54 36999999888643 1 578
Q ss_pred CCCCCceEEEE-eCCCcccCceeccCCCCHHHHHHHHHhcCC
Q 013976 348 KSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 388 (432)
Q Consensus 348 ~i~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 388 (432)
++.++|+++++ ++|..+ +... +.+.+.++|++.+.
T Consensus 111 ~v~~~P~~~lid~~G~i~-----~~~~-~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 111 AILTLPTNILLSPTGKIL-----ARDI-QGEALTGKLKELLK 146 (148)
T ss_dssp TCCSSSEEEEECTTSBEE-----EESC-CHHHHHHHHHHHC-
T ss_pred CCCCcCEEEEECCCCeEE-----EecC-CHHHHHHHHHHHHc
Confidence 99999999999 566543 2222 88999999988764
No 204
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=98.99 E-value=1.3e-09 Score=83.32 Aligned_cols=100 Identities=14% Similarity=0.182 Sum_probs=82.7
Q ss_pred eeecCC-Cchhhhcc--CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCc
Q 013976 153 VTIFTR-ENAPSVFE--SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPK 228 (432)
Q Consensus 153 v~~l~~-~~~~~~~~--~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P 228 (432)
+.+++. +++...+. .+++.++.||++| +.|+.+.+.+.+++.++.+.+.|+.+|++. .+.+++.||+.+. |
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~v~~~--P 76 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDE---CEDIAMEYNISSM--P 76 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTT---CHHHHHHTTCCSS--S
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccc---hHHHHHHcCCCcc--c
Confidence 456677 77777666 6777888899999 999999999999999998889999999987 5689999999988 9
Q ss_pred EEEEEeCCCCceecCCCCCCHHHHHHHHHHH
Q 013976 229 VLAYTGNDDAKKHILDGELTLDKIKTFGEDF 259 (432)
Q Consensus 229 ~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~ 259 (432)
+++++.++. ....+.| .+.+.+.+|++++
T Consensus 77 t~~~~~~G~-~~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 77 TFVFLKNGV-KVEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp EEEEEETTE-EEEEEES-CCHHHHHHHHHHT
T ss_pred EEEEEcCCc-EEEEEcC-CCHHHHHHHHHHh
Confidence 998885442 3445667 7899999999875
No 205
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=98.99 E-value=9.2e-10 Score=90.48 Aligned_cols=125 Identities=16% Similarity=0.134 Sum_probs=89.4
Q ss_pred CceeecC-CCchhhhccC--CCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCC
Q 013976 151 PLVTIFT-RENAPSVFES--PIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEA 226 (432)
Q Consensus 151 p~v~~l~-~~~~~~~~~~--~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~ 226 (432)
..+..++ .+++...+.. ++++++.||++| +.|+.+.+.|.++++++. ++.|+.+|++. ++.+++.||+.+.
T Consensus 12 ~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~~~---~~~l~~~~~v~~~- 86 (153)
T 2wz9_A 12 AAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP-QVSFVKLEAEG---VPEVSEKYEISSV- 86 (153)
T ss_dssp CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTT---SHHHHHHTTCCSS-
T ss_pred CCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC-CeEEEEEECCC---CHHHHHHcCCCCC-
Confidence 3455665 4777776665 778889999999 999999999999999985 59999999988 5689999999988
Q ss_pred CcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcCCcCccccCCCCCCCCCCceEEEecccchhhh
Q 013976 227 PKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKLKPFFKSDPIPETNDGDVKIVVGNNFDEIV 293 (432)
Q Consensus 227 ~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g~l~~~~~se~~p~~~~~~v~~l~~~~~~~~~ 293 (432)
|+++++.++ .....+.| .+.+.|.+||+++++.... .....+..++..+|++..
T Consensus 87 -Pt~~~~~~G-~~~~~~~G-~~~~~l~~~i~~~l~~~~~----------~~~~~~~~l~~~~f~~~~ 140 (153)
T 2wz9_A 87 -PTFLFFKNS-QKIDRLDG-AHAPELTKKVQRHASSGSF----------LPSAKVKVDTDPNSSSVD 140 (153)
T ss_dssp -SEEEEEETT-EEEEEEES-SCHHHHHHHHHHHSCTTSS----------CSCCCCCCC---------
T ss_pred -CEEEEEECC-EEEEEEeC-CCHHHHHHHHHHHhccccC----------CCccccccCCCCChhhHH
Confidence 999999733 23344556 5788999999998864322 113346667888888755
No 206
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=98.99 E-value=8.8e-10 Score=87.18 Aligned_cols=102 Identities=14% Similarity=0.099 Sum_probs=86.3
Q ss_pred ceeecCC-CchhhhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcE
Q 013976 152 LVTIFTR-ENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKV 229 (432)
Q Consensus 152 ~v~~l~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~ 229 (432)
.+.+++. +++...+..++++++.||++| +.|+.+.+.+.+++.++. .+.|+.+|++. .+.+++.|++... |+
T Consensus 20 mv~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~d~---~~~l~~~~~v~~~--Pt 93 (125)
T 1r26_A 20 SVVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP-TVKFAKVDADN---NSEIVSKCRVLQL--PT 93 (125)
T ss_dssp CCEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT-TSEEEEEETTT---CHHHHHHTTCCSS--SE
T ss_pred ceEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCC---CHHHHHHcCCCcc--cE
Confidence 3778888 888888878888899999999 999999999999999995 49999999987 5689999999988 99
Q ss_pred EEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 230 LAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 230 i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
++++..+. ....+.| .+.+.|.+|++++++
T Consensus 94 ~~i~~~G~-~~~~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 94 FIIARSGK-MLGHVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp EEEEETTE-EEEEEES-SCHHHHHHHHHHHHH
T ss_pred EEEEeCCe-EEEEEeC-CCHHHHHHHHHHHhc
Confidence 98885442 3344567 789999999999875
No 207
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.99 E-value=1.7e-09 Score=88.57 Aligned_cols=92 Identities=16% Similarity=0.251 Sum_probs=73.7
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc------------------------ccCCCCC
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH------------------------HRAKSDG 351 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~------------------------~~~~i~~ 351 (432)
.++++||.||++||++|..+.+.+.+++..+.+. ++.++.++++.+.. ..+++.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 105 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAK-GFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKG 105 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGG-TEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcC-CeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCC
Confidence 4689999999999999999999999999999874 58999999886541 3589999
Q ss_pred CceEEEE-eCCCcccCceeccC--CCCHHHHHHHHHhcCCCCC
Q 013976 352 FPTILFF-PAGNKSFDPINVDV--DRTVVALYKFLKKNASIPF 391 (432)
Q Consensus 352 ~P~i~~~-~~g~~~~~~~~y~g--~~~~~~l~~fi~~~~~~~~ 391 (432)
+|+++++ ++|..+. .+.| ..+.+.|.++|+++.....
T Consensus 106 ~P~~~lid~~G~i~~---~~~g~~~~~~~~l~~~i~~~~~~~~ 145 (152)
T 3gl3_A 106 MPTSFLIDRNGKVLL---QHVGFRPADKEALEQQILAALGGNE 145 (152)
T ss_dssp SSEEEEECTTSBEEE---EEESCCTTTHHHHHHHHHHHTC---
T ss_pred CCeEEEECCCCCEEE---EEccCCCcCHHHHHHHHHHHHcccc
Confidence 9999999 6666543 5666 3466999999999876544
No 208
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=98.98 E-value=8.6e-10 Score=85.30 Aligned_cols=102 Identities=22% Similarity=0.284 Sum_probs=83.4
Q ss_pred eeec-CCCchhhhccC----CCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCC
Q 013976 153 VTIF-TRENAPSVFES----PIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEA 226 (432)
Q Consensus 153 v~~l-~~~~~~~~~~~----~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~ 226 (432)
+..+ +.+++...+.. ++++++.||++| +.|+.+.+.+.+++.++.+++.|+.+|++. .+.+++.|++.+.
T Consensus 4 v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~---~~~~~~~~~v~~~- 79 (112)
T 1ep7_A 4 VIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDA---VAAVAEAAGITAM- 79 (112)
T ss_dssp EEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTT---THHHHHHHTCCBS-
T ss_pred EEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCc---hHHHHHHcCCCcc-
Confidence 4455 45667766654 678888999999 999999999999999999889999999987 5689999999988
Q ss_pred CcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 227 PKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 227 ~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
|+++++..+ .....+.|. +.+.|.+|++++++
T Consensus 80 -Pt~~~~~~G-~~~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 80 -PTFHVYKDG-VKADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp -SEEEEEETT-EEEEEEESC-CHHHHHHHHHHHHC
T ss_pred -cEEEEEECC-eEEEEEcCC-CHHHHHHHHHHHhc
Confidence 999888543 234456776 99999999998874
No 209
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=98.98 E-value=3.2e-09 Score=81.91 Aligned_cols=104 Identities=16% Similarity=0.209 Sum_probs=84.7
Q ss_pred CCceeecCCCchhhhcc--CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCC
Q 013976 150 LPLVTIFTRENAPSVFE--SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEA 226 (432)
Q Consensus 150 ~p~v~~l~~~~~~~~~~--~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~ 226 (432)
...+..++.+++...+. .++++++.||++| +.|+.+.+.+.+++.++.+ +.|+.+|++.. ...+++.||+.+.
T Consensus 4 ~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~-v~~~~vd~~~~--~~~~~~~~~v~~~- 79 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD-VIFLKLDCNQE--NKTLAKELGIRVV- 79 (111)
T ss_dssp TTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSST--THHHHHHHCCSBS-
T ss_pred cCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC-eEEEEEecCcc--hHHHHHHcCCCee-
Confidence 45688899999988776 4677888899999 9999999999999999986 99999999832 5689999999988
Q ss_pred CcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHh
Q 013976 227 PKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 260 (432)
Q Consensus 227 ~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~ 260 (432)
|+++++..+ .....+.|. +.+.|.+|++.++
T Consensus 80 -Pt~~~~~~G-~~~~~~~G~-~~~~l~~~l~~~~ 110 (111)
T 2pu9_C 80 -PTFKILKEN-SVVGEVTGA-KYDKLLEAIQAAR 110 (111)
T ss_dssp -SEEEEESSS-SEEEEEESS-CHHHHHHHHHHHH
T ss_pred -eEEEEEeCC-cEEEEEcCC-CHHHHHHHHHHhh
Confidence 998777443 233445665 5899999998875
No 210
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=98.98 E-value=3.7e-10 Score=89.61 Aligned_cols=104 Identities=10% Similarity=0.094 Sum_probs=88.9
Q ss_pred ceeecCCCchhhhccCCCcceEEEEEeC---cchhhhHHHHHHHHHhccCc-eEEEEEecCCcccccchhhhhCCCCCCC
Q 013976 152 LVTIFTRENAPSVFESPIKNQLLLFAVS---NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNEDVGKPVSEYFGITGEAP 227 (432)
Q Consensus 152 ~v~~l~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~a~~~~~~-i~f~~vd~~~~~~~~~l~~~~~i~~~~~ 227 (432)
-+..++.++|+..+.++.++++.|+++| ++|+.+.+.+.++|.+|.++ +.|+.||.++ ++.+...|||.+.
T Consensus 18 g~~~~t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe---~~~lA~~ygV~sI-- 92 (140)
T 2qgv_A 18 GWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQ---SEAIGDRFGAFRF-- 92 (140)
T ss_dssp TCEECCHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHH---HHHHHHHHTCCSS--
T ss_pred CCccCCHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCC---CHHHHHHcCCccC--
Confidence 3558899999887766667777777887 68999999999999999999 9999999998 6799999999998
Q ss_pred cEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 228 KVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 228 P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
|+++++.+++ ..-...|..+.+.|.++|+.++.
T Consensus 93 PTlilFk~G~-~v~~~~G~~~k~~l~~~i~~~l~ 125 (140)
T 2qgv_A 93 PATLVFTGGN-YRGVLNGIHPWAELINLMRGLVE 125 (140)
T ss_dssp SEEEEEETTE-EEEEEESCCCHHHHHHHHHHHHC
T ss_pred CEEEEEECCE-EEEEEecCCCHHHHHHHHHHHhc
Confidence 9999997664 33456788999999999999884
No 211
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.98 E-value=1.7e-09 Score=98.90 Aligned_cols=106 Identities=15% Similarity=0.279 Sum_probs=92.3
Q ss_pred CCceeecCCCchhhhccC--CCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCC
Q 013976 150 LPLVTIFTRENAPSVFES--PIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEA 226 (432)
Q Consensus 150 ~p~v~~l~~~~~~~~~~~--~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~ 226 (432)
.+.|.+++.++|..++.. +++++|.||++| ++|+.+.+.+.++++++.+++.|+.||++. ++.+++.|||.+.
T Consensus 6 ~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~---~~~~~~~~~v~~~- 81 (287)
T 3qou_A 6 VENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDA---EQMIAAQFGLRAI- 81 (287)
T ss_dssp CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTT---CHHHHHTTTCCSS-
T ss_pred CCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCcc---CHHHHHHcCCCCC-
Confidence 567999999999998754 678889999999 999999999999999999999999999998 5699999999988
Q ss_pred CcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 227 PKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 227 ~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
|+++++..+. ....+.|..+.+.+.+|+...+.
T Consensus 82 -Pt~~~~~~G~-~~~~~~g~~~~~~l~~~l~~~lp 114 (287)
T 3qou_A 82 -PTVYLFQNGQ-PVDGFQGPQPEEAIRALLDXVLP 114 (287)
T ss_dssp -SEEEEEETTE-EEEEEESCCCHHHHHHHHHHHSC
T ss_pred -CeEEEEECCE-EEEEeeCCCCHHHHHHHHHHHcC
Confidence 9999885442 34457788999999999999874
No 212
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=98.96 E-value=1.3e-09 Score=85.74 Aligned_cols=105 Identities=17% Similarity=0.247 Sum_probs=86.8
Q ss_pred CCceeecCCCchhhhcc----CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCC
Q 013976 150 LPLVTIFTRENAPSVFE----SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITG 224 (432)
Q Consensus 150 ~p~v~~l~~~~~~~~~~----~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~ 224 (432)
.+.+..++.+++...+. .+++.++.||++| +.|+.+.+.|.+++.++.+ +.|+.+|++. ++.+++.||+.+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~---~~~~~~~~~v~~ 87 (122)
T 2vlu_A 12 AEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDE---LKPIAEQFSVEA 87 (122)
T ss_dssp CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTT---CHHHHHHTTCCS
T ss_pred CcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCC---CHHHHHHcCCCc
Confidence 45677778888877654 3677888899999 9999999999999999988 9999999998 568999999998
Q ss_pred CCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcC
Q 013976 225 EAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 262 (432)
Q Consensus 225 ~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g 262 (432)
. |+++++.++ .....+.|.. .+.|.+|++.++++
T Consensus 88 ~--Pt~~~~~~G-~~~~~~~G~~-~~~l~~~l~~~l~~ 121 (122)
T 2vlu_A 88 M--PTFLFMKEG-DVKDRVVGAI-KEELTAKVGLHAAA 121 (122)
T ss_dssp S--SEEEEEETT-EEEEEEESSC-HHHHHHHHHHHHSC
T ss_pred c--cEEEEEeCC-EEEEEEeCcC-HHHHHHHHHHHhcc
Confidence 8 999888543 2344567877 99999999998753
No 213
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=98.95 E-value=8.9e-10 Score=89.74 Aligned_cols=88 Identities=14% Similarity=0.114 Sum_probs=71.9
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc--------------------------c-ccCC
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--------------------------H-HRAK 348 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~--------------------------~-~~~~ 348 (432)
.++++||.||++||++|+.+.|.+.+++..+.+. ++.++.++++.+. . ..++
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 108 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAK-GIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYD 108 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGG-TEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC-CEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcC
Confidence 4689999999999999999999999999999874 6999999988553 2 4578
Q ss_pred CCCCceEEEE-eCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 349 SDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 349 i~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
+.++|+++++ ++|..+. .+.|..+.+.+++.+.+.+
T Consensus 109 i~~~P~~~lid~~G~i~~---~~~g~~~~~~~l~~l~~~l 145 (148)
T 3hcz_A 109 IYATPVLYVLDKNKVIIA---KRIGYENLDDFLVQYEKSL 145 (148)
T ss_dssp CCSSCEEEEECTTCBEEE---ESCCGGGHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCcEEE---ecCCHHHHHHHHHHHHHHh
Confidence 9999999999 6676553 6677777777777776543
No 214
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=98.95 E-value=3.7e-09 Score=81.00 Aligned_cols=97 Identities=8% Similarity=0.116 Sum_probs=78.8
Q ss_pred cCCCchhhhc--cCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEEE
Q 013976 156 FTRENAPSVF--ESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAY 232 (432)
Q Consensus 156 l~~~~~~~~~--~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i 232 (432)
-+.+++...+ ..+++.++.||++| ++|+.+.+.+.++++++. ++.|+.+|++. ++.+++.||+.+. |++++
T Consensus 7 ~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~-~~~~~~vd~~~---~~~~~~~~~v~~~--Pt~~~ 80 (107)
T 1gh2_A 7 GSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP-QAVFLEVDVHQ---CQGTAATNNISAT--PTFQF 80 (107)
T ss_dssp CSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT-TSEEEEEETTT---SHHHHHHTTCCSS--SEEEE
T ss_pred cCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC-CcEEEEEECcc---CHHHHHhcCCCcc--cEEEE
Confidence 3567888777 46778889999999 999999999999999994 59999999987 5689999999988 99988
Q ss_pred EeCCCCceecCCCCCCHHHHHHHHHHHh
Q 013976 233 TGNDDAKKHILDGELTLDKIKTFGEDFL 260 (432)
Q Consensus 233 ~~~~~~~~y~~~~~~~~~~i~~fi~~~~ 260 (432)
+.++. ....+.| .+.+.|.+|+++++
T Consensus 81 ~~~G~-~~~~~~G-~~~~~l~~~l~~~l 106 (107)
T 1gh2_A 81 FRNKV-RIDQYQG-ADAVGLEEKIKQHL 106 (107)
T ss_dssp EETTE-EEEEEES-SCHHHHHHHHHHHH
T ss_pred EECCe-EEEEEeC-CCHHHHHHHHHHhc
Confidence 85443 3344567 45566999998875
No 215
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=98.95 E-value=2.4e-09 Score=82.47 Aligned_cols=98 Identities=13% Similarity=0.075 Sum_probs=82.0
Q ss_pred eecCCCchhhhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEEE
Q 013976 154 TIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAY 232 (432)
Q Consensus 154 ~~l~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i 232 (432)
...+.+++......++++++.||++| +.|+.+.+.+.++++++.+ +.|+.+|++. .+.+++.|++.+. |++++
T Consensus 10 ~~~~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~-~~~~~vd~~~---~~~l~~~~~v~~~--Pt~~~ 83 (109)
T 3f3q_A 10 QFKTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ-ADFYKLDVDE---LGDVAQKNEVSAM--PTLLL 83 (109)
T ss_dssp ECCSHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTT---CHHHHHHTTCCSS--SEEEE
T ss_pred CCCCHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEECCC---CHHHHHHcCCCcc--CEEEE
Confidence 34556777777788888899999999 9999999999999999987 9999999988 5689999999998 99998
Q ss_pred EeCCCCceecCCCCCCHHHHHHHHHHH
Q 013976 233 TGNDDAKKHILDGELTLDKIKTFGEDF 259 (432)
Q Consensus 233 ~~~~~~~~y~~~~~~~~~~i~~fi~~~ 259 (432)
+..+ .....+.|. +.+.|.++++++
T Consensus 84 ~~~G-~~~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 84 FKNG-KEVAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp EETT-EEEEEEESS-CHHHHHHHHHHH
T ss_pred EECC-EEEEEEeCC-CHHHHHHHHHhh
Confidence 8743 334455675 789999999875
No 216
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=98.93 E-value=1.6e-09 Score=83.86 Aligned_cols=102 Identities=19% Similarity=0.262 Sum_probs=85.9
Q ss_pred CceeecCCCchhhhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcE
Q 013976 151 PLVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKV 229 (432)
Q Consensus 151 p~v~~l~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~ 229 (432)
+....++.+++...+..++++++.||++| +.|+.+.+.+.+++.++.+ +.|+.+|++. .+.+++.|++... |+
T Consensus 9 ~~~~~~~~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~-v~~~~vd~~~---~~~~~~~~~v~~~--Pt 82 (112)
T 1syr_A 9 MVKIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTK-MVFIKVDVDE---VSEVTEKENITSM--PT 82 (112)
T ss_dssp CCEEECSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTT---THHHHHHTTCCSS--SE
T ss_pred eEEEECCHHHHHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CEEEEEECCC---CHHHHHHcCCCcc--cE
Confidence 45677888889888888888889999999 9999999999999999986 9999999987 5689999999988 99
Q ss_pred EEEEeCCCCceecCCCCCCHHHHHHHHHHHh
Q 013976 230 LAYTGNDDAKKHILDGELTLDKIKTFGEDFL 260 (432)
Q Consensus 230 i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~ 260 (432)
++++..+ .....+.|. +.+.|.+|+++++
T Consensus 83 ~~~~~~G-~~~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 83 FKVYKNG-SSVDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp EEEEETT-EEEEEEESC-CHHHHHHHHHTTC
T ss_pred EEEEECC-cEEEEEeCC-CHHHHHHHHHHhh
Confidence 9888643 234456787 9999999998764
No 217
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=98.93 E-value=3.3e-09 Score=81.98 Aligned_cols=102 Identities=17% Similarity=0.171 Sum_probs=80.8
Q ss_pred eeecCC-CchhhhccC---CCcceEEEEEeC-cchhhhHHHHHHHHHhcc-CceEEEEEecCCcccccchhhhhCCCCCC
Q 013976 153 VTIFTR-ENAPSVFES---PIKNQLLLFAVS-NDSEKLLPVFEEAAKSFK-GKLIFVYVQMDNEDVGKPVSEYFGITGEA 226 (432)
Q Consensus 153 v~~l~~-~~~~~~~~~---~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~-~~i~f~~vd~~~~~~~~~l~~~~~i~~~~ 226 (432)
+.+++. +++...+.. +++.++.||++| ++|+.+.+.+.+++.++. ..+.|+.+|++. .+.+++.||+.+.
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~---~~~~~~~~~v~~~- 77 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADE---NSEISELFEISAV- 77 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTT---CHHHHHHTTCCSS-
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEeccc---CHHHHHHcCCCcc-
Confidence 456776 778777765 677888899999 999999999999999963 459999999988 5689999999988
Q ss_pred CcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 227 PKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 227 ~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
|+++++..+ .....+.|. +.+.|.++++++++
T Consensus 78 -Pt~~~~~~G-~~~~~~~G~-~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 78 -PYFIIIHKG-TILKELSGA-DPKEYVSLLEDCKN 109 (112)
T ss_dssp -SEEEEEETT-EEEEEECSC-CHHHHHHHHHHHHH
T ss_pred -cEEEEEECC-EEEEEecCC-CHHHHHHHHHHHHh
Confidence 999888543 234456675 56679999998775
No 218
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.93 E-value=1.9e-09 Score=91.44 Aligned_cols=89 Identities=11% Similarity=0.229 Sum_probs=71.3
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCE------EEEEEeCCC-ccc--cc--------------------
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSI------VIAKMDGTT-NEH--HR-------------------- 346 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~------~~~~id~~~-~~~--~~-------------------- 346 (432)
.++++||.||++||++|+.+.+.|.+++..+++. ++ .|+.|+++. +.. ..
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 136 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAA-GNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTA 136 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHC-C---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhc-CCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHH
Confidence 4689999999999999999999999999999763 36 999999887 222 22
Q ss_pred -----CCCCCCceEEEE-eCCCcccCceeccCCCCHHHHHHHHHhcCC
Q 013976 347 -----AKSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 388 (432)
Q Consensus 347 -----~~i~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 388 (432)
+.+..+|+++++ ++|+.+. .+.|..+.+.|.++|++.+.
T Consensus 137 ~~~~~~~v~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 137 ASLGGVPASVIPTTIVLDKQHRPAA---VFLREVTSKDVLDVALPLVD 181 (183)
T ss_dssp GGTTTCCTTCCSEEEEECTTSCEEE---EECSCCCHHHHHHHHHHHHH
T ss_pred HHhccCCCCCCCeEEEECCCCcEEE---EEcCCCCHHHHHHHHHHHHh
Confidence 257899987777 6676553 67888999999999988753
No 219
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.93 E-value=5.1e-09 Score=92.03 Aligned_cols=105 Identities=10% Similarity=0.059 Sum_probs=87.5
Q ss_pred CceeecCCCchhhhccCCCcceEEEEE--eCcchhhhHHHHHHHHHhcc--CceEEEEEecCC--cccccchhhhhCCC-
Q 013976 151 PLVTIFTRENAPSVFESPIKNQLLLFA--VSNDSEKLLPVFEEAAKSFK--GKLIFVYVQMDN--EDVGKPVSEYFGIT- 223 (432)
Q Consensus 151 p~v~~l~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~a~~~~--~~i~f~~vd~~~--~~~~~~l~~~~~i~- 223 (432)
..|..++.++|..++..+.+++|.||+ +|.. +.|.|.++|..+. +.+.|+.||+++ ...++.+|+.|+|+
T Consensus 5 ~~v~~Lt~~nF~~~i~~~~~vlV~FyA~~pWCg---l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~~ 81 (240)
T 2qc7_A 5 KGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGE---KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLDK 81 (240)
T ss_dssp TTCEECCTTHHHHHGGGCSEEEEEECCSSCCSH---HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCCG
T ss_pred CCceECCHHHHHHHHcCCCCEEEEEeCCCCCCc---chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCCC
Confidence 457889999999988777788889999 8833 9999999999997 469999999654 11267899999999
Q ss_pred -CCCCcEEEEEeCCC-CceecCCCCCCHHHHHHHHHHHh
Q 013976 224 -GEAPKVLAYTGNDD-AKKHILDGELTLDKIKTFGEDFL 260 (432)
Q Consensus 224 -~~~~P~i~i~~~~~-~~~y~~~~~~~~~~i~~fi~~~~ 260 (432)
++ |++.++..+. .....|.|.++.+.|.+|+.+..
T Consensus 82 ~~~--PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 82 ESY--PVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp GGC--SEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred CCC--CEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 77 9999997765 34667889999999999999874
No 220
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=98.92 E-value=2.3e-09 Score=82.73 Aligned_cols=102 Identities=9% Similarity=0.140 Sum_probs=82.8
Q ss_pred eeecCCCchhhhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEE
Q 013976 153 VTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLA 231 (432)
Q Consensus 153 v~~l~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~ 231 (432)
+..++.+++ ..+..+++.++.||++| +.|+.+.+.+.+++..+. .+.|+.+|++. .+.+++.||+.+. |+++
T Consensus 5 ~~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~---~~~l~~~~~v~~~--Pt~~ 77 (110)
T 2l6c_A 5 RDITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-QVAISSVDSEA---RPELMKELGFERV--PTLV 77 (110)
T ss_dssp SBCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-TSCEEEEEGGG---CHHHHHHTTCCSS--CEEE
T ss_pred eecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-CcEEEEEcCcC---CHHHHHHcCCccc--CEEE
Confidence 456777888 55566678888999999 999999999999999987 59999999987 5689999999988 9999
Q ss_pred EEeCCCCceecCCCCCCHHHHHHHHHHHhcC
Q 013976 232 YTGNDDAKKHILDGELTLDKIKTFGEDFLEG 262 (432)
Q Consensus 232 i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g 262 (432)
++.++ .....+.|..+.+.|.+++..++++
T Consensus 78 ~~~~G-~~v~~~~G~~~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 78 FIRDG-KVAKVFSGIMNPRELQALYASIHHH 107 (110)
T ss_dssp EEESS-SEEEEEESCCCHHHHHHHHHTC---
T ss_pred EEECC-EEEEEEcCCCCHHHHHHHHHHHhhh
Confidence 88544 3445667889999999999998653
No 221
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.92 E-value=3.8e-09 Score=86.65 Aligned_cols=90 Identities=17% Similarity=0.268 Sum_probs=71.2
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc------------------------c-ccCCCC
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE------------------------H-HRAKSD 350 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~------------------------~-~~~~i~ 350 (432)
.++++||.||++||++|+.+.+.+.+++..+.+. ++.++.++++.+. . ..+++.
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 105 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGK-PFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTT 105 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTS-SEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC-CeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCC
Confidence 4689999999999999999999999999999873 6999999988751 1 357999
Q ss_pred CCceEEEE-eCCCcccCceeccCCC--CHHHHHHHHHhcCCC
Q 013976 351 GFPTILFF-PAGNKSFDPINVDVDR--TVVALYKFLKKNASI 389 (432)
Q Consensus 351 ~~P~i~~~-~~g~~~~~~~~y~g~~--~~~~l~~fi~~~~~~ 389 (432)
++|+++++ ++|+.+. .+.|.. +.+.+.++|++....
T Consensus 106 ~~P~~~lid~~G~i~~---~~~g~~~~~~~~l~~~l~~l~~~ 144 (154)
T 3kcm_A 106 GVPETFVIDRHGVILK---KVVGAMEWDHPEVIAFLNNELSK 144 (154)
T ss_dssp SBCEEEEECTTSBEEE---EEESCCCTTSHHHHHHHHTC---
T ss_pred CCCeEEEECCCCcEEE---EEcCCCccccHHHHHHHHHHHHH
Confidence 99987777 6666543 566754 778999999887643
No 222
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.92 E-value=1.4e-09 Score=87.84 Aligned_cols=104 Identities=8% Similarity=0.068 Sum_probs=74.5
Q ss_pred ceeecCCCchhhhccCCCcceEEEEEeC---cchhhhHHHHHHHHHhccCceE--EEEEecCCcccccchhhhhCCCCCC
Q 013976 152 LVTIFTRENAPSVFESPIKNQLLLFAVS---NDSEKLLPVFEEAAKSFKGKLI--FVYVQMDNEDVGKPVSEYFGITGEA 226 (432)
Q Consensus 152 ~v~~l~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~a~~~~~~i~--f~~vd~~~~~~~~~l~~~~~i~~~~ 226 (432)
-+..++.++|+..+..+...+++|++.| ++|+.+.+.|.+++++| +++. |+.||+++ ++.+++.|||.+.
T Consensus 18 ~~~~l~~~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~---~~~la~~~~V~~i- 92 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQ---SEAIGDRFNVRRF- 92 (142)
T ss_dssp TCEECCCC--------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHH---HHHHHHTTTCCSS-
T ss_pred cCcccccccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCC---CHHHHHhcCCCcC-
Confidence 5678899999988876655556565655 68999999999999999 8888 99999987 5689999999998
Q ss_pred CcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcC
Q 013976 227 PKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 262 (432)
Q Consensus 227 ~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g 262 (432)
|+++++.++ .....+.|..+.+.|.+|++.+++.
T Consensus 93 -PT~~~fk~G-~~v~~~~G~~~~~~l~~~i~~~l~~ 126 (142)
T 2es7_A 93 -PATLVFTDG-KLRGALSGIHPWAELLTLMRSIVDT 126 (142)
T ss_dssp -SEEEEESCC-----CEESCCCHHHHHHHHHHHHC-
T ss_pred -CeEEEEeCC-EEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 999998544 3445667889999999999998863
No 223
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=98.91 E-value=1.9e-09 Score=82.15 Aligned_cols=96 Identities=11% Similarity=0.214 Sum_probs=79.1
Q ss_pred CCCchhhhcc--CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEEEE
Q 013976 157 TRENAPSVFE--SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYT 233 (432)
Q Consensus 157 ~~~~~~~~~~--~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~ 233 (432)
+.+++...+. .+++.++.||++| +.|+.+.+.+.+++.++.+ +.|+.+|++. ++.+++.|++.+. |+++++
T Consensus 7 ~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~---~~~~~~~~~v~~~--Pt~~~~ 80 (105)
T 3m9j_A 7 SKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDD---CQDVASESEVKSM--PTFQFF 80 (105)
T ss_dssp SHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETTT---CHHHHHHTTCCBS--SEEEEE
T ss_pred CHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhhh---hHHHHHHcCCCcC--cEEEEE
Confidence 3455556555 5677888899999 9999999999999999988 9999999988 5689999999988 999998
Q ss_pred eCCCCceecCCCCCCHHHHHHHHHHHh
Q 013976 234 GNDDAKKHILDGELTLDKIKTFGEDFL 260 (432)
Q Consensus 234 ~~~~~~~y~~~~~~~~~~i~~fi~~~~ 260 (432)
.+++ ....+.|. +.+.|.+|+++++
T Consensus 81 ~~g~-~~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 81 KKGQ-KVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp ETTE-EEEEEESS-CHHHHHHHHHHHC
T ss_pred ECCe-EEEEEeCC-CHHHHHHHHHHhC
Confidence 5443 34456787 9999999998763
No 224
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=98.91 E-value=1.2e-09 Score=90.76 Aligned_cols=75 Identities=19% Similarity=0.338 Sum_probs=59.6
Q ss_pred ccchhhhhcCCCcEEEEEeCCCChhhhhhHHH-H--HHHHHHhcCCCCEEEEEEeCCCccc--ccC--------CCCCCc
Q 013976 287 NNFDEIVLDESKDVLLEIYAPWCGHCQAFEPT-Y--NKLAKHLRGVDSIVIAKMDGTTNEH--HRA--------KSDGFP 353 (432)
Q Consensus 287 ~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~-~--~~la~~~~~~~~~~~~~id~~~~~~--~~~--------~i~~~P 353 (432)
+.|.... ..++++||.||++||++|+.|.+. | .+++..+.+ ++.++.+|++++.. ..+ ++.++|
T Consensus 30 ea~~~A~-~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~--~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g~P 106 (173)
T 3ira_A 30 EAFEKAR-KENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE--AFVSIKVDREERPDIDNIYMTVCQIILGRGGWP 106 (173)
T ss_dssp HHHHHHH-HHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH--HCEEEEEETTTCHHHHHHHHHHHHHHHSCCCSS
T ss_pred HHHHHHH-HhCCCEEEecccchhHhhccccccccCCHHHHHHHHh--cCceeeeCCcccCcHHHHHHHHHHHHcCCCCCc
Confidence 4555533 567999999999999999999983 4 567777766 69999999998765 345 899999
Q ss_pred eEEEEe-CCCcc
Q 013976 354 TILFFP-AGNKS 364 (432)
Q Consensus 354 ~i~~~~-~g~~~ 364 (432)
+++++. +|+.+
T Consensus 107 t~v~l~~dG~~v 118 (173)
T 3ira_A 107 LNIIMTPGKKPF 118 (173)
T ss_dssp EEEEECTTSCEE
T ss_pred ceeeECCCCCce
Confidence 999995 66554
No 225
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=98.91 E-value=3.6e-09 Score=80.43 Aligned_cols=99 Identities=12% Similarity=0.195 Sum_probs=79.6
Q ss_pred eecCC-Cchhhhcc--CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcE
Q 013976 154 TIFTR-ENAPSVFE--SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKV 229 (432)
Q Consensus 154 ~~l~~-~~~~~~~~--~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~ 229 (432)
.+++. +++...+. .+++.++.||++| +.|+.+.+.+.+++.++. .+.|+.+|++. ++.+++.||+... |+
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~---~~~~~~~~~v~~~--Pt 75 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQ---NEEAAAKYSVTAM--PT 75 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTT---CHHHHHHTTCCSS--SE
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEeccC---CHHHHHHcCCccc--cE
Confidence 34555 66766665 5667788899999 999999999999999997 59999999987 5689999999988 99
Q ss_pred EEEEeCCCCceecCCCCCCHHHHHHHHHHHh
Q 013976 230 LAYTGNDDAKKHILDGELTLDKIKTFGEDFL 260 (432)
Q Consensus 230 i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~ 260 (432)
++++.++. ....+.| .+.+.+.+|+++++
T Consensus 76 ~~~~~~g~-~~~~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 76 FVFIKDGK-EVDRFSG-ANETKLRETITRHK 104 (104)
T ss_dssp EEEEETTE-EEEEEES-SCHHHHHHHHHHHC
T ss_pred EEEEeCCc-EEEEEeC-CCHHHHHHHHHhhC
Confidence 98886442 3445567 68999999998763
No 226
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.91 E-value=1e-09 Score=91.71 Aligned_cols=99 Identities=21% Similarity=0.314 Sum_probs=71.2
Q ss_pred eEEE--ecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCc----------------
Q 013976 281 VKIV--VGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN---------------- 342 (432)
Q Consensus 281 v~~l--~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~---------------- 342 (432)
+..+ .+..+.......++++||.||++||++|+.+.|.+.++++. ++.++.|+++..
T Consensus 33 l~~~~~~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~-----~v~vv~v~~~~~~~~~~~~~~~~~~~~~ 107 (168)
T 2b1k_A 33 LESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ-----GIRVVGMNYKDDRQKAISWLKELGNPYA 107 (168)
T ss_dssp EEESSSTTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT-----TCCEEEEEESCCHHHHHHHHHHHCCCCS
T ss_pred eecccCCCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC-----CCEEEEEECCCChHHHHHHHHHcCCCCc
Confidence 4444 45555433334678999999999999999999999999875 366666664321
Q ss_pred -------cc--ccCCCCCCceEEEE-eCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 343 -------EH--HRAKSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 343 -------~~--~~~~i~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
.. ..+++.++|+.+++ ++|..+. .+.|..+.+.+.++|++.+
T Consensus 108 ~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~~l 159 (168)
T 2b1k_A 108 LSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRY---RHAGDLNPRVWEEEIKPLW 159 (168)
T ss_dssp EEEEETTCHHHHHHTCCSSSEEEEECTTSBEEE---EEESCCCHHHHHHTTHHHH
T ss_pred eeeECcchHHHHHcCccccCEEEEECCCCeEEE---EEeCCCCHHHHHHHHHHHH
Confidence 11 35799999966666 6666543 6778889999998888765
No 227
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=98.91 E-value=3.2e-09 Score=83.45 Aligned_cols=102 Identities=17% Similarity=0.213 Sum_probs=84.5
Q ss_pred ceeecCC-CchhhhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCc-eEEEEEecCCcccccchhhhhCCCCCCCc
Q 013976 152 LVTIFTR-ENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNEDVGKPVSEYFGITGEAPK 228 (432)
Q Consensus 152 ~v~~l~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~-i~f~~vd~~~~~~~~~l~~~~~i~~~~~P 228 (432)
.+..++. +++...+..++++++.||++| +.|+.+.+.+.+++..+.++ +.|+.+|++. ++.+++.|++... |
T Consensus 16 ~~~~i~~~~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~---~~~~~~~~~v~~~--P 90 (121)
T 2j23_A 16 SVQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDE---QSQIAQEVGIRAM--P 90 (121)
T ss_dssp CEEECCSHHHHHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTT---CHHHHHHHTCCSS--S
T ss_pred ceEEcCCHHHHHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcC---CHHHHHHcCCCcc--c
Confidence 3555555 777777777778889999999 99999999999999999876 9999999998 5689999999988 9
Q ss_pred EEEEEeCCCCceecCCCCCCHHHHHHHHHHHh
Q 013976 229 VLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 260 (432)
Q Consensus 229 ~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~ 260 (432)
+++++.++ .....+.|. +.+.|.+|++.++
T Consensus 91 t~~~~~~G-~~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 91 TFVFFKNG-QKIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp EEEEEETT-EEEEEEESS-CHHHHHHHHHHHT
T ss_pred EEEEEECC-eEEeeEcCC-CHHHHHHHHHHhh
Confidence 99888643 234456777 9999999999875
No 228
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.91 E-value=4.6e-09 Score=86.06 Aligned_cols=88 Identities=19% Similarity=0.279 Sum_probs=69.3
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCc-------------------------cc--ccCC
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN-------------------------EH--HRAK 348 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~-------------------------~~--~~~~ 348 (432)
.+++++|.||++||++|+.+.|.+.+++..+.+. ++.++.|+++.. .. ..++
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 106 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDK-GFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYC 106 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTT-TEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccC-CeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhC
Confidence 4689999999999999999999999999999873 699999998863 12 4789
Q ss_pred CCCCceEEEE-eCCCcccCceeccCCCCHHHHHHHHHhcCCCC
Q 013976 349 SDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNASIP 390 (432)
Q Consensus 349 i~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~~ 390 (432)
+.++|+++++ ++|..+. .+ .+.+.+.++|++.....
T Consensus 107 v~~~P~~~lid~~G~i~~---~~---~~~~~l~~~l~~l~~~~ 143 (152)
T 2lrn_A 107 IVGFPHIILVDPEGKIVA---KE---LRGDDLYNTVEKFVNGA 143 (152)
T ss_dssp CCSSCEEEEECTTSEEEE---EC---CCTTHHHHHHHHHHTSS
T ss_pred CCcCCeEEEECCCCeEEE---ee---CCHHHHHHHHHHHHhhc
Confidence 9999999999 6665542 22 34567777777765543
No 229
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.91 E-value=5e-09 Score=86.50 Aligned_cols=89 Identities=19% Similarity=0.371 Sum_probs=71.1
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCC-------------------ccc--ccCCCCCCce
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-------------------NEH--HRAKSDGFPT 354 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~-------------------~~~--~~~~i~~~P~ 354 (432)
.++++||.||++||++|+.+.+.+.+++..+.+. ++.++.++++. +.. ..+++.++|+
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~ 118 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKG-DLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPD 118 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTT-SEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSSE
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccC-CeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcce
Confidence 4689999999999999999999999999999853 79999999887 112 5789999999
Q ss_pred EEEE-eCCCcccCceeccC--CCCHHHHHHHHHhcCC
Q 013976 355 ILFF-PAGNKSFDPINVDV--DRTVVALYKFLKKNAS 388 (432)
Q Consensus 355 i~~~-~~g~~~~~~~~y~g--~~~~~~l~~fi~~~~~ 388 (432)
++++ ++|..+. .+.| ..+..++++.+.+...
T Consensus 119 ~~lid~~G~i~~---~~~G~~~~~~~~~~~~~~~~~~ 152 (158)
T 3hdc_A 119 TFIVDRKGIIRQ---RVTGGIEWDAPKVVSYLKSLEG 152 (158)
T ss_dssp EEEECTTSBEEE---EEESCCCTTSHHHHHHHHTTC-
T ss_pred EEEEcCCCCEEE---EEeCCCccchHHHHHHHHhhcc
Confidence 8888 6665543 6677 4566888888776653
No 230
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=98.90 E-value=4.2e-09 Score=82.15 Aligned_cols=99 Identities=18% Similarity=0.308 Sum_probs=81.8
Q ss_pred eeecCC-Cchhhhcc--CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCc
Q 013976 153 VTIFTR-ENAPSVFE--SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPK 228 (432)
Q Consensus 153 v~~l~~-~~~~~~~~--~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P 228 (432)
+.+++. +++...+. .++++++.||++| +.|+.+.+.+.+++.++ .+.|+.+|++. ++.+++.||+.+. |
T Consensus 15 v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~---~~~~~~~~~v~~~--P 87 (117)
T 2xc2_A 15 LIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVDK---LEETARKYNISAM--P 87 (117)
T ss_dssp EEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETTT---SHHHHHHTTCCSS--S
T ss_pred eEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECCc---cHHHHHHcCCCcc--c
Confidence 677777 88877766 6777888899999 99999999999999999 69999999987 5689999999988 9
Q ss_pred EEEEEeCCCCceecCCCCCCHHHHHHHHHHHh
Q 013976 229 VLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 260 (432)
Q Consensus 229 ~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~ 260 (432)
+++++.++. ....+.| .+.+.|.+|+++++
T Consensus 88 t~~~~~~G~-~~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 88 TFIAIKNGE-KVGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp EEEEEETTE-EEEEEES-SCHHHHHHHHHHHC
T ss_pred eEEEEeCCc-EEEEEeC-CCHHHHHHHHHHhC
Confidence 998885442 3344567 68999999998763
No 231
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.90 E-value=6e-09 Score=86.63 Aligned_cols=85 Identities=16% Similarity=0.255 Sum_probs=69.6
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCC------------------Ccc--------------
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT------------------TNE-------------- 343 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~------------------~~~-------------- 343 (432)
.++++||.||++||++|+.+.+.+.++...+. ++.|+.|+++ .+.
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~---~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR---EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPS 112 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT---TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTT
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC---CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCC
Confidence 46899999999999999999999999999998 5999999987 221
Q ss_pred ---------c-ccCCCCCCceEEEE-eCCCcccCceeccCCC-CHHHHHHHHHhcCC
Q 013976 344 ---------H-HRAKSDGFPTILFF-PAGNKSFDPINVDVDR-TVVALYKFLKKNAS 388 (432)
Q Consensus 344 ---------~-~~~~i~~~P~i~~~-~~g~~~~~~~~y~g~~-~~~~l~~fi~~~~~ 388 (432)
. ..+++.++|+++++ ++|+.+ +.|.. +.+.|.++|++..+
T Consensus 113 ~~~~~d~~~~~~~~~v~~~P~~~lid~~G~i~-----~~g~~~~~~~l~~~l~~l~~ 164 (165)
T 3ha9_A 113 WIMVMDDGSLVEKFNVRSIDYIVIMDKSSNVL-----YAGTTPSLGELESVIKSVQG 164 (165)
T ss_dssp SEEEECCSHHHHHTTCCSSSEEEEEETTCCEE-----EEEESCCHHHHHHHHHHC--
T ss_pred eeEEeChHHHHHHhCCCCceEEEEEcCCCcEE-----EeCCCCCHHHHHHHHHHHhc
Confidence 1 46899999999999 555443 37877 99999999988753
No 232
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=98.87 E-value=1.2e-08 Score=80.32 Aligned_cols=105 Identities=15% Similarity=0.185 Sum_probs=85.1
Q ss_pred CCCceeecCCCchhhhcc--CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCC
Q 013976 149 KLPLVTIFTRENAPSVFE--SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGE 225 (432)
Q Consensus 149 ~~p~v~~l~~~~~~~~~~--~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~ 225 (432)
....+..++.+++...+. .++++++.||++| ++|+.+.+.+.++++++.+ +.|+.+|++.. ++.+++.||+.+.
T Consensus 16 ~~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~--~~~~~~~~~v~~~ 92 (124)
T 1faa_A 16 IVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD-VIFLKLDCNQE--NKTLAKELGIRVV 92 (124)
T ss_dssp TTTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSST--THHHHHHHCCSSS
T ss_pred cCCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC-CEEEEEecCcc--hHHHHHHcCCCee
Confidence 345688899999987765 5677888899999 9999999999999999986 99999999842 5688999999988
Q ss_pred CCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHh
Q 013976 226 APKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 260 (432)
Q Consensus 226 ~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~ 260 (432)
|+++++.++. ....+.|.. .+.+.++++.++
T Consensus 93 --Pt~~~~~~G~-~~~~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 93 --PTFKILKENS-VVGEVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp --SEEEEEETTE-EEEEEESSC-HHHHHHHHHHHT
T ss_pred --eEEEEEeCCc-EEEEEcCCC-HHHHHHHHHHhh
Confidence 9988875443 334456654 899999998865
No 233
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.86 E-value=5.9e-09 Score=84.87 Aligned_cols=96 Identities=14% Similarity=0.161 Sum_probs=72.1
Q ss_pred ccchhhh---hcCCCcEEEEEeCCCChhhhhhHHHH---HHHHHHhcCCCCEEEEEEeCCCccc----ccCCCCCCceEE
Q 013976 287 NNFDEIV---LDESKDVLLEIYAPWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTTNEH----HRAKSDGFPTIL 356 (432)
Q Consensus 287 ~~~~~~~---~~~~~~~lv~f~~~~c~~c~~~~~~~---~~la~~~~~~~~~~~~~id~~~~~~----~~~~i~~~P~i~ 356 (432)
.+|++.+ ...+++++|.||++||..|+.|.... .+++..++. ++.+..+|.+..+. ..|++.++|+++
T Consensus 29 ~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~--~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~ 106 (153)
T 2dlx_A 29 GSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIRE--HFIFWQVYHDSEEGQRYIQFYKLGDFPYVS 106 (153)
T ss_dssp SCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHH--TEEEEEEESSSHHHHHHHHHHTCCSSSEEE
T ss_pred cCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHc--CeEEEEEecCCHhHHHHHHHcCCCCCCEEE
Confidence 4666655 23479999999999999999997654 456666655 69999999965443 478999999999
Q ss_pred EEeC--CCcccCceeccCCCCHHHHHHHHHhcCC
Q 013976 357 FFPA--GNKSFDPINVDVDRTVVALYKFLKKNAS 388 (432)
Q Consensus 357 ~~~~--g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 388 (432)
++.. |..+. .+.| .+.+.++++|.+...
T Consensus 107 fld~~~G~~l~---~~~g-~~~~~fl~~L~~~l~ 136 (153)
T 2dlx_A 107 ILDPRTGQKLV---EWHQ-LDVSSFLDQVTGFLG 136 (153)
T ss_dssp EECTTTCCCCE---EESS-CCHHHHHHHHHHHHH
T ss_pred EEeCCCCcEee---ecCC-CCHHHHHHHHHHHHH
Confidence 9944 44542 3455 899999888877764
No 234
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=98.85 E-value=4.5e-09 Score=85.81 Aligned_cols=101 Identities=12% Similarity=0.074 Sum_probs=83.4
Q ss_pred CCCchhhhc--cCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEEEE
Q 013976 157 TRENAPSVF--ESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYT 233 (432)
Q Consensus 157 ~~~~~~~~~--~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~ 233 (432)
+.+++...+ ..++++++.||++| ++|+.+.+.+.++++++.+++.|+.+|+++ .+.+++.|+|... |+++++
T Consensus 10 ~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~---~~~l~~~~~v~~~--Pt~~~~ 84 (149)
T 3gix_A 10 SKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQ---TAVYTQYFDISYI--PSTVFF 84 (149)
T ss_dssp SHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTT---CCHHHHHTTCCSS--SEEEEE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCc---CHHHHHHcCCCcc--CeEEEE
Confidence 455666655 45778889999999 999999999999999999999999999987 5689999999988 999877
Q ss_pred eCCCCce---------ecCCC-CCCHHHHHHHHHHHhcCC
Q 013976 234 GNDDAKK---------HILDG-ELTLDKIKTFGEDFLEGK 263 (432)
Q Consensus 234 ~~~~~~~---------y~~~~-~~~~~~i~~fi~~~~~g~ 263 (432)
..+. .. ..+.| ..+.+.|.++++.++.|.
T Consensus 85 ~~G~-~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~~~~ 123 (149)
T 3gix_A 85 FNGQ-HMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYRGA 123 (149)
T ss_dssp ETTE-EEEEECSSSCCSCEESCCSSHHHHHHHHHHHHHHH
T ss_pred ECCe-EEEeecCCCCCCeEeeecCCHHHHHHHHHHHHHHh
Confidence 6543 23 35667 789999999999987543
No 235
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.85 E-value=6.4e-09 Score=85.27 Aligned_cols=85 Identities=13% Similarity=0.081 Sum_probs=68.7
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc------------------------c-ccCCCC
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE------------------------H-HRAKSD 350 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~------------------------~-~~~~i~ 350 (432)
.++++||.||++||++|....|.+.+++..+++. ++.++.|+++... . ..|++.
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~ 112 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQ-GFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVT 112 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG-TEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCC
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccC-CeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCcc
Confidence 3579999999999999999999999999999874 6999999988654 1 356899
Q ss_pred CCceEEEE-eCCCcccCceeccCCCCHHHHHHHHH
Q 013976 351 GFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLK 384 (432)
Q Consensus 351 ~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~ 384 (432)
++|+++++ ++|..+. .+.|..+.+....-+.
T Consensus 113 ~~P~~~lid~~G~i~~---~~~g~~~~e~~~~~~~ 144 (152)
T 2lrt_A 113 NLPSVFLVNRNNELSA---RGENIKDLDEAIKKLL 144 (152)
T ss_dssp SCSEEEEEETTTEEEE---ETTTCSCHHHHHHHHH
T ss_pred cCceEEEECCCCeEEE---ecCCHHHHHHHHHHHH
Confidence 99999999 5666554 6778888766655544
No 236
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.84 E-value=6.1e-09 Score=97.06 Aligned_cols=89 Identities=11% Similarity=0.153 Sum_probs=73.9
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCc----------------------------cc-cc
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN----------------------------EH-HR 346 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~----------------------------~~-~~ 346 (432)
.++++||.||++||.+|+.+.|.+.+++..+++. ++.++.|+++.. .. ..
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~-~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~ 159 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDS-GLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTN 159 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG-TEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcC-CeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHH
Confidence 3689999999999999999999999999999863 699999987531 11 46
Q ss_pred CCCCCCceEEEE-eCCCcccCceeccCCCCHHHHHHHHHhcCC
Q 013976 347 AKSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 388 (432)
Q Consensus 347 ~~i~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 388 (432)
+++..+|+++++ ++|+.+. .+.|..+.+.|.++|++.+.
T Consensus 160 ygV~~~Pt~~lID~~G~Iv~---~~~G~~~~~~l~~~I~~lL~ 199 (352)
T 2hyx_A 160 YRNRYWPAEYLIDATGTVRH---IKFGEGDYNVTETLVRQLLN 199 (352)
T ss_dssp TTCCEESEEEEECTTSBEEE---EEESBCCHHHHHHHHHHHHH
T ss_pred cCCCccCEEEEEeCCCeEEE---EEcCCCCHHHHHHHHHHHHh
Confidence 899999999999 6676554 67888899999999988764
No 237
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.82 E-value=3.4e-09 Score=87.15 Aligned_cols=85 Identities=18% Similarity=0.293 Sum_probs=67.1
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc-----------------------c--ccCCCC
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-----------------------H--HRAKSD 350 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~-----------------------~--~~~~i~ 350 (432)
.+++++|.||++||++|+.+.+.+.+++.. .++.++.++++.+. . ..+++.
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~----~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 116 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD----KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVY 116 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC----TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCC
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc----CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcC
Confidence 368999999999999999999999988765 25888888865321 1 358999
Q ss_pred CCceEEEE-eCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 351 GFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 351 ~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
++|+++++ ++|..+. .+.|..+.+.|.++|++.+
T Consensus 117 ~~P~~~~id~~G~i~~---~~~g~~~~~~l~~~l~~~l 151 (156)
T 1kng_A 117 GVPETFVVGREGTIVY---KLVGPITPDNLRSVLLPQM 151 (156)
T ss_dssp SSCEEEEECTTSBEEE---EEESCCCHHHHHHTHHHHH
T ss_pred ccCeEEEEcCCCCEEE---EEeCCCCHHHHHHHHHHHH
Confidence 99977777 6776543 6788889999999988765
No 238
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.81 E-value=1.4e-08 Score=84.55 Aligned_cols=65 Identities=20% Similarity=0.407 Sum_probs=55.9
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc------------------------c--ccCCC
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE------------------------H--HRAKS 349 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~------------------------~--~~~~i 349 (432)
.++++||+||++||++|+.+.|.+.++++.+++..++.++.|+++... . ..|++
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 468999999999999999999999999999986447888888887652 1 46899
Q ss_pred CCCceEEEEeC
Q 013976 350 DGFPTILFFPA 360 (432)
Q Consensus 350 ~~~P~i~~~~~ 360 (432)
.++|+++++..
T Consensus 127 ~~~Pt~~lid~ 137 (165)
T 3s9f_A 127 ESIPTLIGLNA 137 (165)
T ss_dssp CSSSEEEEEET
T ss_pred CCCCEEEEEeC
Confidence 99999999974
No 239
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.81 E-value=5.9e-09 Score=89.37 Aligned_cols=88 Identities=8% Similarity=0.096 Sum_probs=70.2
Q ss_pred CcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCc-----------------------------cc--cc
Q 013976 298 KDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN-----------------------------EH--HR 346 (432)
Q Consensus 298 ~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~-----------------------------~~--~~ 346 (432)
.++||.||++||++|+...+.+.+++..+.+. ++.++.|+++.. .. ..
T Consensus 47 ~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 125 (196)
T 2ywi_A 47 AATVIMFICNHCPFVKHVQHELVRLANDYMPK-GVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAKA 125 (196)
T ss_dssp SEEEEEECCSSCHHHHHHHHHHHHHHHHHGGG-TCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHH
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHHHhC-CcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHHH
Confidence 35999999999999999999999999999863 588999988531 11 46
Q ss_pred CCCCCCceEEEE-eCCCcccCcee---------ccCCCCHHHHHHHHHhcCCC
Q 013976 347 AKSDGFPTILFF-PAGNKSFDPIN---------VDVDRTVVALYKFLKKNASI 389 (432)
Q Consensus 347 ~~i~~~P~i~~~-~~g~~~~~~~~---------y~g~~~~~~l~~fi~~~~~~ 389 (432)
+++..+|+++++ ++|..+. . +.|..+.+.|.++|++.+..
T Consensus 126 ~~v~~~P~~~lid~~G~i~~---~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~ 175 (196)
T 2ywi_A 126 YDAACTPDFYIFDRDLKCVY---RGQLDDSRPNNGIPVTGESIRAALDALLEG 175 (196)
T ss_dssp HTCCEESEEEEEETTCBEEE---EECSSSCCTTTCCCCCCHHHHHHHHHHHHT
T ss_pred hCCCCCCeEEEEcCCCeEEE---ccccCcccccccCccCHHHHHHHHHHHHcC
Confidence 789999999999 5565432 2 45677889999999988754
No 240
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=98.80 E-value=8.9e-09 Score=81.23 Aligned_cols=101 Identities=18% Similarity=0.182 Sum_probs=80.3
Q ss_pred ceeec-CCCchhhhcc----CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCC
Q 013976 152 LVTIF-TRENAPSVFE----SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGE 225 (432)
Q Consensus 152 ~v~~l-~~~~~~~~~~----~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~ 225 (432)
.+.++ +.+++...+. .++++++.||++| +.|+.+.+.+.+++.++. .+.|+.+|++. .+.+++.|++...
T Consensus 17 ~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d~---~~~l~~~~~v~~~ 92 (124)
T 1xfl_A 17 QVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTDE---LKSVASDWAIQAM 92 (124)
T ss_dssp CCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETTT---SHHHHHHTTCCSS
T ss_pred cEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECcc---CHHHHHHcCCCcc
Confidence 34455 5566666554 3667888899999 999999999999999997 59999999987 5689999999988
Q ss_pred CCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHh
Q 013976 226 APKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 260 (432)
Q Consensus 226 ~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~ 260 (432)
|+++++.++. ....+.| .+.+.|.+++++++
T Consensus 93 --Pt~~~~~~G~-~~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 93 --PTFMFLKEGK-ILDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp --SEEEEEETTE-EEEEEES-CCHHHHHHHHHHHC
T ss_pred --CEEEEEECCE-EEEEEeC-CCHHHHHHHHHHhc
Confidence 9998885432 3344567 68999999998875
No 241
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.80 E-value=1.2e-08 Score=82.62 Aligned_cols=83 Identities=17% Similarity=0.197 Sum_probs=62.7
Q ss_pred eEEEecccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc-----------------
Q 013976 281 VKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE----------------- 343 (432)
Q Consensus 281 v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~----------------- 343 (432)
+..++++.+.-.- -.++++||.||++||++|+.+.|.+.+++..+++..++.++.|+++...
T Consensus 13 l~~~~g~~~~l~~-~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~ 91 (144)
T 1i5g_A 13 VLKGAAADIALPS-LAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPF 91 (144)
T ss_dssp EEETTEEEEEGGG-GTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCT
T ss_pred EEcCCCCEecHHH-cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCcccccc
Confidence 3444444433221 2468999999999999999999999999999985347999999988632
Q ss_pred --------c-ccCCCCCCceEEEEe--CCCcc
Q 013976 344 --------H-HRAKSDGFPTILFFP--AGNKS 364 (432)
Q Consensus 344 --------~-~~~~i~~~P~i~~~~--~g~~~ 364 (432)
. ..+++.++|+++++. +|..+
T Consensus 92 ~~~d~~~~~~~~~~v~~~P~~~lid~~~G~i~ 123 (144)
T 1i5g_A 92 EDRKGMEFLTTGFDVKSIPTLVGVEADSGNII 123 (144)
T ss_dssp TCHHHHHHHHHHTTCCSSSEEEEEETTTCCEE
T ss_pred CchHHHHHHHHHcCCCCCCEEEEEECCCCcEE
Confidence 1 468999999999996 56543
No 242
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=98.80 E-value=4.6e-09 Score=84.26 Aligned_cols=102 Identities=13% Similarity=0.165 Sum_probs=84.1
Q ss_pred ceeecCCCchhhhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEec---------CCcccccchhhhhC
Q 013976 152 LVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQM---------DNEDVGKPVSEYFG 221 (432)
Q Consensus 152 ~v~~l~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~---------~~~~~~~~l~~~~~ 221 (432)
.+..++.+++...+.. ++++.||++| ++|+.+.+.+.++++++. +.|+.+|+ +. ++.+++.||
T Consensus 17 ~v~~l~~~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~---~~~l~~~~~ 89 (135)
T 3emx_A 17 RLIYITPEEFRQLLQG--DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSA---ARLEMNKAG 89 (135)
T ss_dssp EEEECCHHHHHHHHTS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHH---HHHHHHHHT
T ss_pred ceeecCHHHHHHHhCC--cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhh---hHHHHHHcC
Confidence 4667788888877665 7888899999 999999999999999997 89999999 44 568899999
Q ss_pred CCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcCC
Q 013976 222 ITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGK 263 (432)
Q Consensus 222 i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g~ 263 (432)
+.+. |+++++..+ .....+.|..+.+.+..+++..+++.
T Consensus 90 v~~~--Pt~~~~~~G-~~v~~~~G~~~~~~~~~~i~~~~~~~ 128 (135)
T 3emx_A 90 VEGT--PTLVFYKEG-RIVDKLVGATPWSLKVEKAREIYGGE 128 (135)
T ss_dssp CCSS--SEEEEEETT-EEEEEEESCCCHHHHHHHHHHHC---
T ss_pred Ccee--CeEEEEcCC-EEEEEEeCCCCHHHHHHHHHHHhCCC
Confidence 9998 999998744 34456789999999999999988653
No 243
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=98.80 E-value=5e-09 Score=81.35 Aligned_cols=98 Identities=11% Similarity=0.134 Sum_probs=78.7
Q ss_pred eeecCC-CchhhhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEE
Q 013976 153 VTIFTR-ENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVL 230 (432)
Q Consensus 153 v~~l~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i 230 (432)
+.+++. +.+..+...+++.++.||++| +.|+.+.+.+.+++.++.+ +.|+.+|++. ++.+++.|++... |++
T Consensus 14 ~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~---~~~l~~~~~v~~~--Pt~ 87 (114)
T 2oe3_A 14 ITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDE---SPDIAKECEVTAM--PTF 87 (114)
T ss_dssp SCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTT---CHHHHHHTTCCSB--SEE
T ss_pred eeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCC---CHHHHHHCCCCcc--cEE
Confidence 444444 445566677778889999999 9999999999999999988 9999999987 5689999999988 999
Q ss_pred EEEeCCCCceecCCCCCCHHHHHHHHHH
Q 013976 231 AYTGNDDAKKHILDGELTLDKIKTFGED 258 (432)
Q Consensus 231 ~i~~~~~~~~y~~~~~~~~~~i~~fi~~ 258 (432)
+++..+ .....+.|.. .+.|.+|+++
T Consensus 88 ~~~~~G-~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 88 VLGKDG-QLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp EEEETT-EEEEEEESSC-HHHHHHHHHT
T ss_pred EEEeCC-eEEEEEeCCC-HHHHHHHHHh
Confidence 887543 2334567766 8999999875
No 244
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=98.80 E-value=9.2e-09 Score=83.20 Aligned_cols=101 Identities=7% Similarity=0.003 Sum_probs=79.6
Q ss_pred CCchhhhc-c-CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEEEEe
Q 013976 158 RENAPSVF-E-SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTG 234 (432)
Q Consensus 158 ~~~~~~~~-~-~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~ 234 (432)
.+++...+ . .++++++.||++| ++|+.+.+.+.++++++.+++.|+.+|+++ ++.+++.|++.+. |+++++.
T Consensus 11 ~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~---~~~~~~~~~i~~~--Pt~~~~~ 85 (142)
T 1qgv_A 11 GWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITE---VPDFNKMYELYDP--CTVMFFF 85 (142)
T ss_dssp HHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTT---CCTTTTSSCSCSS--CEEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEcccc---CHHHHHHcCCCCC--CEEEEEE
Confidence 45555433 3 4677888999999 999999999999999998889999999998 5689999999988 9998886
Q ss_pred CCCCce--------ecCCCCCC-HHHHHHHHHHHhcCC
Q 013976 235 NDDAKK--------HILDGELT-LDKIKTFGEDFLEGK 263 (432)
Q Consensus 235 ~~~~~~--------y~~~~~~~-~~~i~~fi~~~~~g~ 263 (432)
+++... ....|..+ .+.+.++++.++.|.
T Consensus 86 ~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~~~~ 123 (142)
T 1qgv_A 86 RNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYRGA 123 (142)
T ss_dssp TTEEEEEECC------CCSCCSCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcceeeeecCcHHHHHHHHHHHHHHH
Confidence 553221 13455554 899999999988753
No 245
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.79 E-value=1.2e-09 Score=87.86 Aligned_cols=102 Identities=13% Similarity=0.126 Sum_probs=80.5
Q ss_pred CceeecCCCchhhhccCCC--cceEEEEEeC-cchhhhHHHHHHHHHhccC-ceEEEEEecCCcccccchhhhhCCC---
Q 013976 151 PLVTIFTRENAPSVFESPI--KNQLLLFAVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNEDVGKPVSEYFGIT--- 223 (432)
Q Consensus 151 p~v~~l~~~~~~~~~~~~~--~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~-~i~f~~vd~~~~~~~~~l~~~~~i~--- 223 (432)
..+..++.+++...+..+. ++++.||++| ++|+.+.+.|.+++.++.+ ++.|+.+|++. ++.+++.|++.
T Consensus 7 ~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~---~~~~~~~~~v~~~~ 83 (137)
T 2dj0_A 7 GYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGR---YTDVSTRYKVSTSP 83 (137)
T ss_dssp SCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTT---CHHHHHHTTCCCCS
T ss_pred ceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcc---CHHHHHHccCcccC
Confidence 3578899999988765554 6688899999 9999999999999999986 79999999988 56899999998
Q ss_pred ---CCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHH
Q 013976 224 ---GEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGED 258 (432)
Q Consensus 224 ---~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~ 258 (432)
.. |+++++..+. ....+.|..+.+.|.+|+.+
T Consensus 84 ~~~~~--Pt~~~~~~G~-~~~~~~G~~~~~~l~~~l~~ 118 (137)
T 2dj0_A 84 LTKQL--PTLILFQGGK-EAMRRPQIDKKGRAVSWTFS 118 (137)
T ss_dssp SSSCS--SEEEEESSSS-EEEEESCBCSSSCBCCCCCC
T ss_pred CcCCC--CEEEEEECCE-EEEEecCcCchHHHHHHHhc
Confidence 66 9998885443 34445676666655555543
No 246
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.78 E-value=1.9e-08 Score=81.76 Aligned_cols=68 Identities=16% Similarity=0.321 Sum_probs=57.1
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc----------------------c----ccCCC
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE----------------------H----HRAKS 349 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~----------------------~----~~~~i 349 (432)
.++++||.||++||++|+.+.|.+.+++..+++..++.++.|+++... . ..+++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNV 106 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTC
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCC
Confidence 468999999999999999999999999999984337899999888632 1 46899
Q ss_pred CCCceEEEEe--CCCc
Q 013976 350 DGFPTILFFP--AGNK 363 (432)
Q Consensus 350 ~~~P~i~~~~--~g~~ 363 (432)
.++|+++++. +|..
T Consensus 107 ~~~Pt~~lid~~~G~i 122 (146)
T 1o8x_A 107 ESIPTLIGVDADSGDV 122 (146)
T ss_dssp CSSSEEEEEETTTCCE
T ss_pred CCCCEEEEEECCCCeE
Confidence 9999999997 5654
No 247
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=98.25 E-value=7.8e-10 Score=84.40 Aligned_cols=101 Identities=23% Similarity=0.243 Sum_probs=82.7
Q ss_pred eeecCCCchhhh-ccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEE
Q 013976 153 VTIFTRENAPSV-FESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVL 230 (432)
Q Consensus 153 v~~l~~~~~~~~-~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i 230 (432)
+..++.+++... ...+++.+++||++| +.|+.+.+.+.+++.++.+++.|+.+|++. +..+++.||+... |++
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~v~~~--Pt~ 77 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDE---NPNTAAQYGIRSI--PTL 77 (106)
Confidence 456777887754 456677888899999 999999999999999999889999999987 5588999999987 999
Q ss_pred EEEeCCCCceecCCCCCCHHHHHHHHHHH
Q 013976 231 AYTGNDDAKKHILDGELTLDKIKTFGEDF 259 (432)
Q Consensus 231 ~i~~~~~~~~y~~~~~~~~~~i~~fi~~~ 259 (432)
+++.++ .....+.|..+.+.+.+|+++.
T Consensus 78 ~~~~~g-~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 78 LLFKNG-QVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 888433 3445667888899999998764
No 248
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=98.75 E-value=4.4e-08 Score=71.30 Aligned_cols=81 Identities=15% Similarity=0.108 Sum_probs=69.4
Q ss_pred cceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEEEEeCCCCceecCCCCCC
Q 013976 170 KNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELT 248 (432)
Q Consensus 170 ~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~~~ 248 (432)
..+++|+++| +.|+.+.+.+++++.++.+++.|+.+|+++ ++.+++.||+.+. |++++ + ++. .+.|..+
T Consensus 4 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~---~~~~~~~~~v~~~--Pt~~~--~--G~~-~~~G~~~ 73 (85)
T 1fo5_A 4 VKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVME---NPQKAMEYGIMAV--PTIVI--N--GDV-EFIGAPT 73 (85)
T ss_dssp EEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSS---SCCTTTSTTTCCS--SEEEE--T--TEE-ECCSSSS
T ss_pred eEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCC---CHHHHHHCCCccc--CEEEE--C--CEE-eeecCCC
Confidence 4577889999 999999999999999999889999999987 5588999999988 99977 2 233 6788889
Q ss_pred HHHHHHHHHHHh
Q 013976 249 LDKIKTFGEDFL 260 (432)
Q Consensus 249 ~~~i~~fi~~~~ 260 (432)
.+.+.+++++.+
T Consensus 74 ~~~l~~~l~~~l 85 (85)
T 1fo5_A 74 KEALVEAIKKRL 85 (85)
T ss_dssp SHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC
Confidence 999999998753
No 249
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.74 E-value=2.1e-08 Score=81.13 Aligned_cols=68 Identities=21% Similarity=0.411 Sum_probs=56.9
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc----------------------c----ccCCC
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE----------------------H----HRAKS 349 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~----------------------~----~~~~i 349 (432)
.++++||.||++||++|+.+.|.+.++++.+++..++.++.|+++... . ..+++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGV 106 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTC
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCC
Confidence 468999999999999999999999999999984347899999888642 1 35799
Q ss_pred CCCceEEEEe--CCCc
Q 013976 350 DGFPTILFFP--AGNK 363 (432)
Q Consensus 350 ~~~P~i~~~~--~g~~ 363 (432)
.++|+++++. +|..
T Consensus 107 ~~~Pt~~lid~~~G~i 122 (144)
T 1o73_A 107 ESIPTLITINADTGAI 122 (144)
T ss_dssp CSSSEEEEEETTTCCE
T ss_pred CCCCEEEEEECCCCeE
Confidence 9999999998 5544
No 250
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=98.74 E-value=2e-08 Score=78.20 Aligned_cols=102 Identities=22% Similarity=0.230 Sum_probs=81.9
Q ss_pred ceeec-CCCchhhhccC----CCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCC
Q 013976 152 LVTIF-TRENAPSVFES----PIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGE 225 (432)
Q Consensus 152 ~v~~l-~~~~~~~~~~~----~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~ 225 (432)
.+..+ +.+++...+.. +++.++.||++| +.|+.+.+.+.+++.++. .+.|+.+|++. ++.+++.|++...
T Consensus 7 ~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~---~~~~~~~~~v~~~ 82 (118)
T 2vm1_A 7 AVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVDE---LKDVAEAYNVEAM 82 (118)
T ss_dssp CEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTT---SHHHHHHTTCCSB
T ss_pred ceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEccc---CHHHHHHcCCCcC
Confidence 34555 45677766554 667888899999 999999999999999998 59999999987 5688999999988
Q ss_pred CCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 226 APKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 226 ~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
|+++++.++. ....+.| .+.+.|.+++.++++
T Consensus 83 --Pt~~~~~~g~-~~~~~~g-~~~~~l~~~l~~~~~ 114 (118)
T 2vm1_A 83 --PTFLFIKDGE-KVDSVVG-GRKDDIHTKIVALMG 114 (118)
T ss_dssp --SEEEEEETTE-EEEEEES-CCHHHHHHHHHHHHC
T ss_pred --cEEEEEeCCe-EEEEecC-CCHHHHHHHHHHHhc
Confidence 9998885443 3344567 689999999999875
No 251
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=98.74 E-value=1.9e-08 Score=79.96 Aligned_cols=106 Identities=13% Similarity=0.135 Sum_probs=85.2
Q ss_pred eecCCCchhhhc----cCCCcceEEEEEeC-cchhhhHHHH---HHHHHhccCceEEEEEecCCcccccchhhhhCCCCC
Q 013976 154 TIFTRENAPSVF----ESPIKNQLLLFAVS-NDSEKLLPVF---EEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGE 225 (432)
Q Consensus 154 ~~l~~~~~~~~~----~~~~~~~i~~~~~~-~~~~~~~~~~---~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~ 225 (432)
..++..++...+ ..++++++.||++| +.|+.+.+.+ ..++..+...+.++.+|++... ...+++.||+.+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-~~~~~~~~~v~~~ 87 (130)
T 2kuc_A 9 IAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGE-GVELRKKYGVHAY 87 (130)
T ss_dssp CCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTT-HHHHHHHTTCCSS
T ss_pred CCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcc-hHHHHHHcCCCCC
Confidence 345667776654 35667888899999 9999999998 7788877778999999998533 5688999999988
Q ss_pred CCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcC
Q 013976 226 APKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 262 (432)
Q Consensus 226 ~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g 262 (432)
|++++++.++...+.+.|..+.+.|.+|+++.+.+
T Consensus 88 --Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 88 --PTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp --CEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSC
T ss_pred --CEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHh
Confidence 99999965554556678889999999999998764
No 252
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=98.74 E-value=1.3e-08 Score=78.56 Aligned_cols=101 Identities=20% Similarity=0.215 Sum_probs=80.0
Q ss_pred eeec-CCCchhhhccC----CCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCC
Q 013976 153 VTIF-TRENAPSVFES----PIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEA 226 (432)
Q Consensus 153 v~~l-~~~~~~~~~~~----~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~ 226 (432)
+..+ +.+++...+.. +++.++.||++| +.|+.+.+.+.+++..+. .+.|+.+|++. .+.+++.||+...
T Consensus 6 v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~---~~~~~~~~~v~~~- 80 (113)
T 1ti3_A 6 VIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVDE---LKAVAEEWNVEAM- 80 (113)
T ss_dssp EEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETTT---CHHHHHHHHCSST-
T ss_pred eeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEccc---cHHHHHhCCCCcc-
Confidence 3344 55666665543 667788899999 999999999999999997 59999999987 5689999999988
Q ss_pred CcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 227 PKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 227 ~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
|+++++.++. ....+.| .+.+.|.++++++++
T Consensus 81 -Pt~~~~~~G~-~~~~~~g-~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 81 -PTFIFLKDGK-LVDKTVG-ADKDGLPTLVAKHAT 112 (113)
T ss_dssp -TEEEEEETTE-EEEEEEC-CCTTHHHHHHHHHHH
T ss_pred -cEEEEEeCCE-EEEEEec-CCHHHHHHHHHHhhc
Confidence 9998885432 3344567 688999999998874
No 253
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=98.74 E-value=1.8e-08 Score=81.18 Aligned_cols=101 Identities=15% Similarity=0.176 Sum_probs=81.2
Q ss_pred ecCCCchhhhcc----CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcE
Q 013976 155 IFTRENAPSVFE----SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKV 229 (432)
Q Consensus 155 ~l~~~~~~~~~~----~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~ 229 (432)
..+.+++...+. .++++++.||++| +.|+.+.+.+.+++.++. .+.|+.+|++. ++.+++.||+.+. |+
T Consensus 29 i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~v~~~~---~~~~~~~~~v~~~--Pt 102 (139)
T 3d22_A 29 ITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP-SLMFLVIDVDE---LSDFSASWEIKAT--PT 102 (139)
T ss_dssp ECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTT---SHHHHHHTTCCEE--SE
T ss_pred eCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCEEEEEeCcc---cHHHHHHcCCCcc--cE
Confidence 334567766542 4667888999999 999999999999999995 49999999988 5689999999988 99
Q ss_pred EEEEeCCCCceecCCCCCCHHHHHHHHHHHhcCC
Q 013976 230 LAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGK 263 (432)
Q Consensus 230 i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g~ 263 (432)
++++.++ .....+.|. +.+.|.++++.++++.
T Consensus 103 ~~~~~~G-~~~~~~~G~-~~~~l~~~l~~~~~~~ 134 (139)
T 3d22_A 103 FFFLRDG-QQVDKLVGA-NKPELHKKITAILDSL 134 (139)
T ss_dssp EEEEETT-EEEEEEESC-CHHHHHHHHHHHHHTS
T ss_pred EEEEcCC-eEEEEEeCC-CHHHHHHHHHHHhccC
Confidence 9888443 334456676 8999999999998753
No 254
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.73 E-value=3.9e-08 Score=83.65 Aligned_cols=94 Identities=9% Similarity=0.041 Sum_probs=70.1
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCc-----------------------------cc--
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN-----------------------------EH-- 344 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~-----------------------------~~-- 344 (432)
.++++||.||++||.+|+...+.+.+++..+.+. +.++.|+++.. ..
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~--~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~ 109 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK--VAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVA 109 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT--EEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC--eEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHH
Confidence 3589999999999999999999999999999873 99999998431 11
Q ss_pred ccCCCCCCceEEEE-eCCCcccCcee-----ccCCCCHHHHHHHHHhcCCCCC
Q 013976 345 HRAKSDGFPTILFF-PAGNKSFDPIN-----VDVDRTVVALYKFLKKNASIPF 391 (432)
Q Consensus 345 ~~~~i~~~P~i~~~-~~g~~~~~~~~-----y~g~~~~~~l~~fi~~~~~~~~ 391 (432)
..|++.++|+++++ ++|..+..-.. +.|..+.+.|.+.|++.+....
T Consensus 110 ~~~~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~~~ 162 (188)
T 2cvb_A 110 KAYRALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRGEE 162 (188)
T ss_dssp HHTTCCEESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTTCC
T ss_pred HHcCCCCCCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHcCCC
Confidence 46899999999999 55544310000 1233467889999998876443
No 255
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.73 E-value=6.5e-08 Score=78.93 Aligned_cols=85 Identities=12% Similarity=0.195 Sum_probs=68.2
Q ss_pred CCCcEEEEEeCCCChh--hhhhHHHHHHHHHHh-cCCCCEEEEEEeCCCcc-----------------------c----c
Q 013976 296 ESKDVLLEIYAPWCGH--CQAFEPTYNKLAKHL-RGVDSIVIAKMDGTTNE-----------------------H----H 345 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~--c~~~~~~~~~la~~~-~~~~~~~~~~id~~~~~-----------------------~----~ 345 (432)
.++++||.||++||++ |+...|.+.++...+ ++ .++.++.|+++... . .
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~-~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 110 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKN-KYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAK 110 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTC-SSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccC-CCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHH
Confidence 4689999999999999 999999999999999 54 36999999988653 1 4
Q ss_pred cCCCCCCceEEEE-eCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 346 RAKSDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 346 ~~~i~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
.|++.++|+++++ ++|..+ +.. .+.+.+.+.|++.+
T Consensus 111 ~~~v~~~P~~~lid~~G~i~-----~~~-~~~~~l~~~l~~ll 147 (150)
T 3fw2_A 111 QYSIYKIPANILLSSDGKIL-----AKN-LRGEELKKKIENIV 147 (150)
T ss_dssp HTTCCSSSEEEEECTTSBEE-----EES-CCHHHHHHHHHHHH
T ss_pred HcCCCccCeEEEECCCCEEE-----Ecc-CCHHHHHHHHHHHH
Confidence 6899999999999 666543 222 37888888887654
No 256
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=98.71 E-value=7.2e-09 Score=80.95 Aligned_cols=103 Identities=11% Similarity=0.127 Sum_probs=79.5
Q ss_pred ceeecCCCchhhhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCc-ccccchhhhhCCCCCCCcE
Q 013976 152 LVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNE-DVGKPVSEYFGITGEAPKV 229 (432)
Q Consensus 152 ~v~~l~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~-~~~~~l~~~~~i~~~~~P~ 229 (432)
.+..++.+++...+..+.++++.||++| ++|+.+.+.+.+++.++...+.++-++.... +..+.+++.||+.+. |+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~--Pt 90 (118)
T 1zma_A 13 DLEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPTV--PG 90 (118)
T ss_dssp TSEECCHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCCSS--CE
T ss_pred hhhcCCHHHHHHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCCCC--Ce
Confidence 4667788888887777888889999999 9999999999999999887666553332210 113467899999988 99
Q ss_pred EEEEeCCCCceecCCCCCCHHHHHHHHH
Q 013976 230 LAYTGNDDAKKHILDGELTLDKIKTFGE 257 (432)
Q Consensus 230 i~i~~~~~~~~y~~~~~~~~~~i~~fi~ 257 (432)
++++.++. ....+.|..+.+.|.+|+.
T Consensus 91 ~~~~~~G~-~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 91 FVHITDGQ-INVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp EEEEETTE-EEEECCTTCCHHHHHHHHT
T ss_pred EEEEECCE-EEEEecCCCCHHHHHHHhh
Confidence 98886443 3456789999999999985
No 257
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.70 E-value=4.1e-08 Score=79.40 Aligned_cols=83 Identities=13% Similarity=0.095 Sum_probs=64.7
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc-------------------------c---ccC
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-------------------------H---HRA 347 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~-------------------------~---~~~ 347 (432)
.++++||.||++||++|....|.+.++.+.|++. ++.++.|+++.+. . ..|
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 109 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPD-KIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKY 109 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTT-TEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcC-CEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHc
Confidence 4589999999999999999999999999999864 7999999887432 0 347
Q ss_pred CCCCCceEEEEe-CCCcccCceeccCCCCHHHHHHHHHh
Q 013976 348 KSDGFPTILFFP-AGNKSFDPINVDVDRTVVALYKFLKK 385 (432)
Q Consensus 348 ~i~~~P~i~~~~-~g~~~~~~~~y~g~~~~~~l~~fi~~ 385 (432)
++.++|+.+++. +|+.+ +. ..+.+.+.++|++
T Consensus 110 ~v~~~P~~~lid~~G~i~-----~~-~~~~~~l~~~l~~ 142 (143)
T 4fo5_A 110 DLRKGFKNFLINDEGVII-----AA-NVTPEKLTEILKA 142 (143)
T ss_dssp TGGGCCCEEEECTTSBEE-----EE-SCCHHHHHHHHTC
T ss_pred CCCCCCcEEEECCCCEEE-----Ec-cCCHHHHHHHHHh
Confidence 899999999995 55432 33 2457778877754
No 258
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.68 E-value=6.2e-08 Score=84.50 Aligned_cols=89 Identities=10% Similarity=0.122 Sum_probs=69.9
Q ss_pred CC-cEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCC-----------------------------ccc--
Q 013976 297 SK-DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-----------------------------NEH-- 344 (432)
Q Consensus 297 ~~-~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~-----------------------------~~~-- 344 (432)
++ .+||.||++||++|....|.+.+++..|++. ++.|+.|+++. +..
T Consensus 58 gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~ 136 (218)
T 3u5r_E 58 DSPALLVAFISNRCPFVVLIREALAKFAGDYAGQ-GLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVA 136 (218)
T ss_dssp TCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTT-TEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHH
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhC-CcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHH
Confidence 45 5999999999999999999999999999874 59999999852 111
Q ss_pred ccCCCCCCceEEEE-eCCCcccCceeccC-----------CCCHHHHHHHHHhcCCCCC
Q 013976 345 HRAKSDGFPTILFF-PAGNKSFDPINVDV-----------DRTVVALYKFLKKNASIPF 391 (432)
Q Consensus 345 ~~~~i~~~P~i~~~-~~g~~~~~~~~y~g-----------~~~~~~l~~fi~~~~~~~~ 391 (432)
..|++..+|+++++ ++|+. .|.| ..+.+.|.+.|++.++...
T Consensus 137 ~~~~v~~~P~~~liD~~G~i-----~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~~~ 190 (218)
T 3u5r_E 137 KAYGAACTPDFFLYDRERRL-----VYHGQFDDARPGNGKDVTGADLRAAVDAVLKGKD 190 (218)
T ss_dssp HHHTCCEESEEEEECTTCBE-----EEEECSSSCCTTSCCCCCCHHHHHHHHHHHTTCC
T ss_pred HHcCCCCCCeEEEECCCCcE-----EEeccccccccccccccCHHHHHHHHHHHHcCCC
Confidence 46799999999999 55543 3443 3457899999999876543
No 259
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=98.68 E-value=2.2e-08 Score=78.21 Aligned_cols=103 Identities=18% Similarity=0.258 Sum_probs=79.0
Q ss_pred ceeec--CCCchh-hhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCC
Q 013976 152 LVTIF--TRENAP-SVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAP 227 (432)
Q Consensus 152 ~v~~l--~~~~~~-~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~ 227 (432)
.+..+ +.+++. .+...++++++.||++| +.|+.+.+.+.+++.++ +.+.|+.+|++. .+.+++.|++...
T Consensus 4 ~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~---~~~~~~~~~i~~~-- 77 (118)
T 2f51_A 4 PIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDK---NGNAADAYGVSSI-- 77 (118)
T ss_dssp CSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTT---CHHHHHHTTCCSS--
T ss_pred cceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCC---CHHHHHhcCCCCC--
Confidence 34555 456666 34456778888999999 99999999999999999 679999999998 5689999999988
Q ss_pred cEEEEEeCC---CCceecCCCCCCHHHHHHHHHHHhc
Q 013976 228 KVLAYTGND---DAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 228 P~i~i~~~~---~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
|+++++..+ +.....+.|. ..+.|.+.+..+..
T Consensus 78 Pt~~~~~~~~~~G~~~~~~~G~-~~~~l~~~~~~~~~ 113 (118)
T 2f51_A 78 PALFFVKKEGNEIKTLDQFVGA-DVSRIKADIEKFKH 113 (118)
T ss_dssp SEEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHC-
T ss_pred CEEEEEeCCCCcceEEEeecCC-CHHHHHHHHHHhhh
Confidence 999988651 1223345564 45669999988753
No 260
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.67 E-value=2.4e-08 Score=83.95 Aligned_cols=85 Identities=16% Similarity=0.289 Sum_probs=65.8
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc-----------------------c--ccCCCC
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-----------------------H--HRAKSD 350 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~-----------------------~--~~~~i~ 350 (432)
.++++||.||++||++|+...|.+.+++.. ++.++.|+++... . ..|++.
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~-----~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 131 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ-----GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVY 131 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT-----TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC-----CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCC
Confidence 368999999999999999999999998875 3677777743211 1 357899
Q ss_pred CCceEEEE-eCCCcccCceeccCCCCHHHHHHHHHhcCC
Q 013976 351 GFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 388 (432)
Q Consensus 351 ~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 388 (432)
++|+++++ ++|..+. .+.|..+.+.+.++|.+.+.
T Consensus 132 ~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~~l~ 167 (176)
T 3kh7_A 132 GAPETYLIDKQGIIRH---KIVGVVDQKVWREQLAPLYQ 167 (176)
T ss_dssp SSCEEEEECTTCBEEE---EEESCCCHHHHHHHTHHHHH
T ss_pred CCCeEEEECCCCeEEE---EEcCCCCHHHHHHHHHHHHH
Confidence 99988888 5665543 67788899998888887654
No 261
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=98.67 E-value=3.3e-08 Score=78.98 Aligned_cols=102 Identities=14% Similarity=0.172 Sum_probs=80.7
Q ss_pred ceeecCC-CchhhhccC--CCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCC
Q 013976 152 LVTIFTR-ENAPSVFES--PIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAP 227 (432)
Q Consensus 152 ~v~~l~~-~~~~~~~~~--~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~ 227 (432)
.+.+++. +++...+.. ++++++.||++| +.|+.+.+.+.+++..+ .+.|+.+|++. +..+++.||+.+.
T Consensus 21 ~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~~---~~~l~~~~~v~~~-- 93 (133)
T 3cxg_A 21 IYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVDI---HPKLNDQHNIKAL-- 93 (133)
T ss_dssp EEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETTT---CHHHHHHTTCCSS--
T ss_pred cEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEeccc---hHHHHHhcCCCCC--
Confidence 4566664 677766654 357788899999 99999999999999988 59999999987 5689999999988
Q ss_pred cEEEEEe--CCCC-ceecCCCCCCHHHHHHHHHHHhc
Q 013976 228 KVLAYTG--NDDA-KKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 228 P~i~i~~--~~~~-~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
|+++++. ++++ ....+.|. +.+.|.++++.++.
T Consensus 94 Pt~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 94 PTFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCL 129 (133)
T ss_dssp SEEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSE
T ss_pred CEEEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHH
Confidence 9998884 3322 33445675 89999999999875
No 262
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.67 E-value=4.8e-09 Score=94.37 Aligned_cols=73 Identities=18% Similarity=0.205 Sum_probs=56.5
Q ss_pred cEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCC------ccc--ccCCCCCCceEEEEeCCCcccCceec
Q 013976 299 DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT------NEH--HRAKSDGFPTILFFPAGNKSFDPINV 370 (432)
Q Consensus 299 ~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~------~~~--~~~~i~~~P~i~~~~~g~~~~~~~~y 370 (432)
..+|+||||||++|+.+.|.|+++++.+. .+|++. +.. .+++|+++||+.+ +|+ .|
T Consensus 199 ~~vV~F~A~WC~~Ck~l~p~le~lA~~l~--------~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i--~G~------~~ 262 (291)
T 3kp9_A 199 IGGTMYGAYWCPHCQDQKELFGAAFDQVP--------YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR------TY 262 (291)
T ss_dssp TTCEEEECTTCHHHHHHHHHHGGGGGGSC--------EEESCSSCSSSCCCHHHHTTTCCSTTEEEE--TTE------EE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHcC--------EEEEeecCchhhHHHHHHHcCCcccCeEEE--CCE------Ee
Confidence 34799999999999999999999986542 345552 222 5899999999554 553 58
Q ss_pred cCCCCHHHHHHHHHhcC
Q 013976 371 DVDRTVVALYKFLKKNA 387 (432)
Q Consensus 371 ~g~~~~~~l~~fi~~~~ 387 (432)
.|.++.+.|.+|+.-..
T Consensus 263 ~G~~~~~~L~~~l~~~~ 279 (291)
T 3kp9_A 263 TGVRSLEALAVASGYPL 279 (291)
T ss_dssp ESCCCHHHHHHHTCCCC
T ss_pred cCCCCHHHHHHHHCCCC
Confidence 99999999999986443
No 263
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=98.67 E-value=4.2e-08 Score=78.27 Aligned_cols=93 Identities=15% Similarity=0.142 Sum_probs=76.5
Q ss_pred cCCCcceEEEEEeC-cchhhhHHHHH--HHHHhccCceEEEEEecCCcccccchhhhhCC---CCCCCcEEEEEeCCCCc
Q 013976 166 ESPIKNQLLLFAVS-NDSEKLLPVFE--EAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGI---TGEAPKVLAYTGNDDAK 239 (432)
Q Consensus 166 ~~~~~~~i~~~~~~-~~~~~~~~~~~--~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i---~~~~~P~i~i~~~~~~~ 239 (432)
..++++++.|+++| ++|+.+.+.|. +++..+.+++.|+.+|++..+-+..+++.||+ .+. |++++++.++..
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~--Pt~~~~d~~G~~ 104 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGI--PAVVVVNSDGKV 104 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCS--SEEEEECTTSCE
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCcc--ceEEEECCCCCE
Confidence 45678889999999 99999999999 99999988899999999322126789999999 887 999999666555
Q ss_pred eecCCC-------CCCHHHHHHHHHHHh
Q 013976 240 KHILDG-------ELTLDKIKTFGEDFL 260 (432)
Q Consensus 240 ~y~~~~-------~~~~~~i~~fi~~~~ 260 (432)
.+...| ..+.+.+.+|++.+.
T Consensus 105 ~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 105 RYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp EEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred EEEecCCcccccccCCHHHHHHHHHHhc
Confidence 556666 578999999998763
No 264
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=98.67 E-value=5.2e-08 Score=70.87 Aligned_cols=80 Identities=15% Similarity=0.137 Sum_probs=68.8
Q ss_pred ceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEEEEeCCCCceecCCCCCCH
Q 013976 171 NQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTL 249 (432)
Q Consensus 171 ~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~~~~ 249 (432)
.+++|+++| +.|+.+.+.+.++++++.+++.|+.+|++. ++.+++.||+.+. |++++ ++ +. .+.|..+.
T Consensus 4 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~---~~~~~~~~~v~~~--Pt~~~--~G--~~-~~~G~~~~ 73 (85)
T 1nho_A 4 NIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMV---DREKAIEYGLMAV--PAIAI--NG--VV-RFVGAPSR 73 (85)
T ss_dssp CEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTT---CGGGGGGTCSSCS--SEEEE--TT--TE-EEECSSCC
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCC---CHHHHHhCCceee--CEEEE--CC--EE-EEccCCCH
Confidence 467888999 999999999999999999889999999987 5588999999988 99977 32 33 56787899
Q ss_pred HHHHHHHHHHh
Q 013976 250 DKIKTFGEDFL 260 (432)
Q Consensus 250 ~~i~~fi~~~~ 260 (432)
+.+.+++++.+
T Consensus 74 ~~l~~~l~~~l 84 (85)
T 1nho_A 74 EELFEAINDEM 84 (85)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHHh
Confidence 99999998865
No 265
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.11 E-value=2.7e-09 Score=88.22 Aligned_cols=89 Identities=15% Similarity=0.241 Sum_probs=65.6
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHH-HHHHhcCCCCEEEEEEeCCCccc--ccCC------------------------
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNK-LAKHLRGVDSIVIAKMDGTTNEH--HRAK------------------------ 348 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~-la~~~~~~~~~~~~~id~~~~~~--~~~~------------------------ 348 (432)
.+++++|.||++||++|+.+.|.+.+ +...+....++.++.|+++.... ..+.
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 35799999999999999999999998 88888722378888888876532 2332
Q ss_pred CCCCceEEEE-eCCCcccCceeccCCCCHHHHHHHHHhcCC
Q 013976 349 SDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 388 (432)
Q Consensus 349 i~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 388 (432)
+.++|+++++ ++|+.+. .+.| .+.+.+.++|++..+
T Consensus 112 ~~~~P~~~lid~~G~i~~---~~~g-~~~~~l~~~l~~l~~ 148 (159)
T 2ls5_A 112 DAGITRNVLIDREGKIVK---LTRL-YNEEEFASLVQQINE 148 (159)
Confidence 5679999999 7776653 4444 556667776665543
No 266
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=98.65 E-value=3.5e-08 Score=77.66 Aligned_cols=101 Identities=17% Similarity=0.144 Sum_probs=78.8
Q ss_pred CceeecCCCchhhhccC--CCcceEEEEEe-------C-cchhhhHHHHHHHHHhccCceEEEEEec-------CCcccc
Q 013976 151 PLVTIFTRENAPSVFES--PIKNQLLLFAV-------S-NDSEKLLPVFEEAAKSFKGKLIFVYVQM-------DNEDVG 213 (432)
Q Consensus 151 p~v~~l~~~~~~~~~~~--~~~~~i~~~~~-------~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~-------~~~~~~ 213 (432)
..+...+.+++...+.. ++++++.||++ | ++|+.+.+.+.++++++.+++.|+.+|+ +. +
T Consensus 5 ~~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~---~ 81 (123)
T 1wou_A 5 EEVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDP---N 81 (123)
T ss_dssp EEEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCT---T
T ss_pred eeEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhch---h
Confidence 34555667777766554 67888999999 9 9999999999999999988899999999 44 5
Q ss_pred cchhhhhCCCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHH
Q 013976 214 KPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGED 258 (432)
Q Consensus 214 ~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~ 258 (432)
..+++.|++.+. |+++++... .....+.+ .+.+.|.+|+++
T Consensus 82 ~~~~~~~~i~~~--Pt~~~~~~~-~~~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 82 NDFRKNLKVTAV--PTLLKYGTP-QKLVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp CHHHHHHCCCSS--SEEEETTSS-CEEEGGGG-GCHHHHHHHHHC
T ss_pred HHHHHHCCCCee--CEEEEEcCC-ceEecccc-CCHHHHHHHHhc
Confidence 688999999988 999888652 22222233 578889998864
No 267
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.63 E-value=3.3e-08 Score=74.58 Aligned_cols=78 Identities=19% Similarity=0.186 Sum_probs=60.3
Q ss_pred CCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCC--Cccc--ccCCCCCCceEEEEeCCCcccCceeccC
Q 013976 297 SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT--TNEH--HRAKSDGFPTILFFPAGNKSFDPINVDV 372 (432)
Q Consensus 297 ~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~--~~~~--~~~~i~~~P~i~~~~~g~~~~~~~~y~g 372 (432)
+.+.+++|+++||++|+.+.+.+.+++ . ++.|..+|++ .+.. .+++ .++|++ +.+|+. ...+
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~----~--~i~~~~vdi~~~~~~el~~~~g-~~vP~l--~~~g~~-----~~~~ 80 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYK----D--RFILQEVDITLPENSTWYERYK-FDIPVF--HLNGQF-----LMMH 80 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTS----S--SSEEEEEETTSSTTHHHHHHSS-SSCSEE--EESSSE-----EEES
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhh----h--CCeEEEEECCCcchHHHHHHHC-CCCCEE--EECCEE-----EEec
Confidence 467899999999999999999888763 2 4899999998 4432 4788 999976 456654 2345
Q ss_pred CCCHHHHHHHHHhcCC
Q 013976 373 DRTVVALYKFLKKNAS 388 (432)
Q Consensus 373 ~~~~~~l~~fi~~~~~ 388 (432)
..+.+.|.++|.++..
T Consensus 81 g~~~~~l~~~l~~~~~ 96 (100)
T 1wjk_A 81 RVNTSKLEKQLRKLSG 96 (100)
T ss_dssp SCCHHHHHHHHHSSSC
T ss_pred CCCHHHHHHHHHHHHh
Confidence 6899999999987654
No 268
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.62 E-value=1.6e-07 Score=75.08 Aligned_cols=100 Identities=11% Similarity=0.020 Sum_probs=77.2
Q ss_pred CCceeecCCCchhhhccC---CCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCC
Q 013976 150 LPLVTIFTRENAPSVFES---PIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGE 225 (432)
Q Consensus 150 ~p~v~~l~~~~~~~~~~~---~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~ 225 (432)
...+.+++.+++...+.. ++++++.||++| ++|+.+.+.|.++|.++.+ +.|+.+|++.. .+.|+|...
T Consensus 9 ~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~~-v~~~~vd~~~~------~~~~~i~~~ 81 (135)
T 2dbc_A 9 FGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFPE-TKFVKAIVNSC------IEHYHDNCL 81 (135)
T ss_dssp CCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCSS-EEEEEECCSSS------CSSCCSSCC
T ss_pred CCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC-cEEEEEEhhcC------cccCCCCCC
Confidence 445677788888775543 246788899999 9999999999999999964 99999999873 277899887
Q ss_pred CCcEEEEEeCCCCceecCCCC-------CCHHHHHHHHHHH
Q 013976 226 APKVLAYTGNDDAKKHILDGE-------LTLDKIKTFGEDF 259 (432)
Q Consensus 226 ~~P~i~i~~~~~~~~y~~~~~-------~~~~~i~~fi~~~ 259 (432)
|+++++.++. ....+.|. ++.+.|.+|+..+
T Consensus 82 --Pt~~~~~~G~-~v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 82 --PTIFVYKNGQ-IEGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp --SEEEEESSSS-CSEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred --CEEEEEECCE-EEEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 9999887554 22233332 4889999999986
No 269
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.60 E-value=2.9e-08 Score=82.98 Aligned_cols=88 Identities=14% Similarity=0.109 Sum_probs=68.2
Q ss_pred CCCcEEEEEeCCCChh-hhhhHHHHHHHHHHhcCC--CCEEEEEEeCCCccc----------------------------
Q 013976 296 ESKDVLLEIYAPWCGH-CQAFEPTYNKLAKHLRGV--DSIVIAKMDGTTNEH---------------------------- 344 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~-c~~~~~~~~~la~~~~~~--~~~~~~~id~~~~~~---------------------------- 344 (432)
.++++||.||++||.+ |....|.+.++...++.. .++.++.|+++.+..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 4689999999999997 999999999999988743 269999999875311
Q ss_pred --c---------------cCCCCCCceEEEEeCCCcccCceeccCCC--CHHHHHHHHHhc
Q 013976 345 --H---------------RAKSDGFPTILFFPAGNKSFDPINVDVDR--TVVALYKFLKKN 386 (432)
Q Consensus 345 --~---------------~~~i~~~P~i~~~~~g~~~~~~~~y~g~~--~~~~l~~fi~~~ 386 (432)
. .+.+..+|+++++.+|+.+. .+.|.. +.+.|.+.|++.
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i~~---~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRLVL---LYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEEEE---EECHHHHTCHHHHHHHHHHC
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEEEE---EECCCCCCCHHHHHHHHHHh
Confidence 0 12356889999999554433 566766 899999999875
No 270
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=98.59 E-value=1.6e-07 Score=72.90 Aligned_cols=100 Identities=10% Similarity=-0.013 Sum_probs=77.3
Q ss_pred CCceeecCCCchhhhccC-CC--cceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCC
Q 013976 150 LPLVTIFTRENAPSVFES-PI--KNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGE 225 (432)
Q Consensus 150 ~p~v~~l~~~~~~~~~~~-~~--~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~ 225 (432)
+..+.+++.+++...+.. +. ++++.||++| ++|+.+.+.++++|.+|.+ +.|+.+|+++. ...|++...
T Consensus 2 ~G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~-v~f~kvd~d~~------~~~~~v~~~ 74 (118)
T 3evi_A 2 FGELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPE-TKFVKAIVNSC------IQHYHDNCL 74 (118)
T ss_dssp CCSCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTT-SEEEEEEGGGT------STTCCGGGC
T ss_pred CcceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCC-CEEEEEEhHHh------HHHCCCCCC
Confidence 345778899998875543 33 6788899999 9999999999999999975 99999999862 478899887
Q ss_pred CCcEEEEEeCCCCc--eecCC---C-CCCHHHHHHHHHH
Q 013976 226 APKVLAYTGNDDAK--KHILD---G-ELTLDKIKTFGED 258 (432)
Q Consensus 226 ~~P~i~i~~~~~~~--~y~~~---~-~~~~~~i~~fi~~ 258 (432)
|+++++.+++.. ..-+. | .++.+.|..++.+
T Consensus 75 --PT~~~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 75 --PTIFVYKNGQIEAKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp --SEEEEEETTEEEEEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred --CEEEEEECCEEEEEEeChhhhCCCCCCHHHHHHHHHH
Confidence 999999776421 11111 1 5789999999977
No 271
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=98.58 E-value=2.5e-08 Score=79.21 Aligned_cols=102 Identities=18% Similarity=0.222 Sum_probs=80.8
Q ss_pred eeec-CCCchhhhcc----CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCC
Q 013976 153 VTIF-TRENAPSVFE----SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEA 226 (432)
Q Consensus 153 v~~l-~~~~~~~~~~----~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~ 226 (432)
+.++ +.+++...+. .+++.++.||++| +.|+.+.+.+.+++.++. .+.|+.+|++. +..+++.|++...
T Consensus 16 ~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~---~~~~~~~~~v~~~- 90 (130)
T 1wmj_A 16 VIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVDE---LKEVAEKYNVEAM- 90 (130)
T ss_dssp SBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTTT---SGGGHHHHTCCSS-
T ss_pred eEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEeccc---hHHHHHHcCCCcc-
Confidence 4445 4466665554 3668889999999 999999999999999997 49999999987 5689999999988
Q ss_pred CcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcC
Q 013976 227 PKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 262 (432)
Q Consensus 227 ~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g 262 (432)
|+++++.++ .....+.| .+.+.|.+|+.+++..
T Consensus 91 -Pt~~~~~~g-~~~~~~~g-~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 91 -PTFLFIKDG-AEADKVVG-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp -CCCCBCTTT-TCCBCCCT-TCTTTHHHHHHHHTSS
T ss_pred -ceEEEEeCC-eEEEEEeC-CCHHHHHHHHHHHHhc
Confidence 998877433 33445567 6889999999998864
No 272
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=98.58 E-value=3.3e-08 Score=94.73 Aligned_cols=109 Identities=13% Similarity=0.148 Sum_probs=85.6
Q ss_pred CceeecCCCchhhhccCC--CcceEEEEEeC-cchhhhHHHHHHHHHhcc---C-----ceEEEEEecCCcccccchhhh
Q 013976 151 PLVTIFTRENAPSVFESP--IKNQLLLFAVS-NDSEKLLPVFEEAAKSFK---G-----KLIFVYVQMDNEDVGKPVSEY 219 (432)
Q Consensus 151 p~v~~l~~~~~~~~~~~~--~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~---~-----~i~f~~vd~~~~~~~~~l~~~ 219 (432)
..+..++.++|...+..+ ++++|.||++| ++|+.+.+.|.++++++. + ++.|+.||++. ++.+++.
T Consensus 23 ~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~---~~~la~~ 99 (470)
T 3qcp_A 23 SSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCAS---EVDLCRK 99 (470)
T ss_dssp TTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTT---CHHHHHH
T ss_pred CCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCC---CHHHHHH
Confidence 358889999999887644 56889999999 999999999999999997 3 59999999998 5689999
Q ss_pred hCCCCCCCcEEEEEeCCCC-ceecCCCC------------CCHHHHHHHHHHHhcCCc
Q 013976 220 FGITGEAPKVLAYTGNDDA-KKHILDGE------------LTLDKIKTFGEDFLEGKL 264 (432)
Q Consensus 220 ~~i~~~~~P~i~i~~~~~~-~~y~~~~~------------~~~~~i~~fi~~~~~g~l 264 (432)
|+|.++ |+++++..++. ....|.|. ++.+.+...++.+++..+
T Consensus 100 y~V~~~--PTlilf~~gg~~~~~~y~G~r~~e~L~fI~k~l~~~eLe~~~e~Link~~ 155 (470)
T 3qcp_A 100 YDINFV--PRLFFFYPRDSCRSNEECGTSSLEHVAFENSHLEVDELESEVRRLVNKHM 155 (470)
T ss_dssp TTCCSS--CEEEEEEESSCCCTTSCCCCCCEEEEECSCTTCCHHHHHHHHHHHHHHHC
T ss_pred cCCCcc--CeEEEEECCCceEEEEeeCCCCHHHHHHHHHhcCHHHHHHHHHHHhhhcc
Confidence 999998 99998865442 33345553 455667776666655443
No 273
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=98.58 E-value=8.5e-08 Score=76.63 Aligned_cols=99 Identities=7% Similarity=0.080 Sum_probs=77.6
Q ss_pred CchhhhccC--CCcceEEEEEeC-cchhhhHHHH---HHHHHhccCceEEEEEecCCc-ccccchhhhhCCCCCCCcEEE
Q 013976 159 ENAPSVFES--PIKNQLLLFAVS-NDSEKLLPVF---EEAAKSFKGKLIFVYVQMDNE-DVGKPVSEYFGITGEAPKVLA 231 (432)
Q Consensus 159 ~~~~~~~~~--~~~~~i~~~~~~-~~~~~~~~~~---~~~a~~~~~~i~f~~vd~~~~-~~~~~l~~~~~i~~~~~P~i~ 231 (432)
+.+...+.. ++++++.||++| +.|+.+.+.+ .++++.+.+ +.|+.+|++.. +....+++.||+.+. |+++
T Consensus 20 ~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~-~~~~~vd~~~~~~~~~~l~~~~~v~~~--Pt~~ 96 (134)
T 2fwh_A 20 DELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD-TVLLQANVTANDAQDVALLKHLNVLGL--PTIL 96 (134)
T ss_dssp HHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT-SEEEEEECTTCCHHHHHHHHHTTCCSS--SEEE
T ss_pred HHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-cEEEEEeCCCCcchHHHHHHHcCCCCC--CEEE
Confidence 444443332 667888999999 9999999988 899999987 99999999542 115688999999988 9999
Q ss_pred EEeCCCCce--ecCCCCCCHHHHHHHHHHHh
Q 013976 232 YTGNDDAKK--HILDGELTLDKIKTFGEDFL 260 (432)
Q Consensus 232 i~~~~~~~~--y~~~~~~~~~~i~~fi~~~~ 260 (432)
+++.++... +.+.|..+.+.|.++++..-
T Consensus 97 ~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~~ 127 (134)
T 2fwh_A 97 FFDGQGQEHPQARVTGFMDAETFSAHLRDRQ 127 (134)
T ss_dssp EECTTSCBCGGGCBCSCCCHHHHHHHHHHC-
T ss_pred EECCCCCEeeeeeeeeccCHHHHHHHHHhcC
Confidence 996554333 57889999999999998753
No 274
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.57 E-value=2.4e-07 Score=78.64 Aligned_cols=89 Identities=13% Similarity=0.124 Sum_probs=68.4
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCC-------ccc------c-c---------------
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-------NEH------H-R--------------- 346 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~-------~~~------~-~--------------- 346 (432)
.++++||.||++||++|....|.+.++...|++. ++.++.|+++. ... . .
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~-~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~ 123 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ-GFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNG 123 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGG-TCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhC-CeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCC
Confidence 4689999999999999999999999999999874 58888887652 000 0 1
Q ss_pred -----------------CCCCCCc---eEEEE-eCCCcccCceeccCCCCHHHHHHHHHhcCC
Q 013976 347 -----------------AKSDGFP---TILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 388 (432)
Q Consensus 347 -----------------~~i~~~P---~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 388 (432)
+++..+| +.+++ ++|..+. .+.|..+.+.|.+.|++.+.
T Consensus 124 ~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~---~~~g~~~~~~l~~~i~~lL~ 183 (187)
T 3dwv_A 124 ENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVE---RFSPGASVKDIEEKLIPLLG 183 (187)
T ss_dssp C-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEE---EECTTCCHHHHHHHHHHHC-
T ss_pred cchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEE---EECCCCCHHHHHHHHHHHHh
Confidence 0234566 87777 7777654 67888899999999998875
No 275
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.57 E-value=1.4e-07 Score=78.65 Aligned_cols=89 Identities=11% Similarity=0.137 Sum_probs=70.3
Q ss_pred CCcEEEEEeCCCChh-hhhhHHHHHHHHHHhcC---CCCEEEEEEeCCCcc-----------------------------
Q 013976 297 SKDVLLEIYAPWCGH-CQAFEPTYNKLAKHLRG---VDSIVIAKMDGTTNE----------------------------- 343 (432)
Q Consensus 297 ~~~~lv~f~~~~c~~-c~~~~~~~~~la~~~~~---~~~~~~~~id~~~~~----------------------------- 343 (432)
++++||.||++||++ |....+.+.++...++. ..++.++.|+++...
T Consensus 26 gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 105 (171)
T 2rli_A 26 GQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVAQ 105 (171)
T ss_dssp TSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHHH
T ss_pred CCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHH
Confidence 589999999999998 99999999999999963 137898888887421
Q ss_pred c-ccCCCCCCc---------------eEEEE-eCCCcccCceeccCCCCHHHHHHHHHhcCC
Q 013976 344 H-HRAKSDGFP---------------TILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 388 (432)
Q Consensus 344 ~-~~~~i~~~P---------------~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 388 (432)
. ..|++...| +++++ ++|..+. .+.|..+.+.|.+.|++.+.
T Consensus 106 ~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 106 ASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTD---YYGRSRSAEQISDSVRRHMA 164 (171)
T ss_dssp HHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEE---EEESSCCHHHHHHHHHHHHH
T ss_pred HHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEE---EECCCCCHHHHHHHHHHHHH
Confidence 1 257777777 77777 6776654 67888899999999988763
No 276
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.56 E-value=1.5e-07 Score=77.96 Aligned_cols=90 Identities=7% Similarity=0.052 Sum_probs=71.0
Q ss_pred CCCcEEEEEeCCCChh-hhhhHHHHHHHHHHhcCC---CCEEEEEEeCCCcc----------------------------
Q 013976 296 ESKDVLLEIYAPWCGH-CQAFEPTYNKLAKHLRGV---DSIVIAKMDGTTNE---------------------------- 343 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~-c~~~~~~~~~la~~~~~~---~~~~~~~id~~~~~---------------------------- 343 (432)
.++++||.||++||++ |....+.+.++...++.. .++.++.|+++...
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 3689999999999998 999999999999999741 36888888876521
Q ss_pred -c-ccCCCCCCc---------------eEEEE-eCCCcccCceeccCCCCHHHHHHHHHhcCC
Q 013976 344 -H-HRAKSDGFP---------------TILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 388 (432)
Q Consensus 344 -~-~~~~i~~~P---------------~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 388 (432)
. ..+++...| +++++ ++|..+. .+.|..+.+.|.+.|++.+.
T Consensus 102 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~---~~~g~~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 102 QVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLD---YFGQNKRKGEIAASIATHMR 161 (164)
T ss_dssp HHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEE---EEETTCCHHHHHHHHHHHHG
T ss_pred HHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEE---EeCCCCCHHHHHHHHHHHHH
Confidence 1 357888888 66666 6776654 67788899999999987653
No 277
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=97.96 E-value=8.2e-09 Score=83.46 Aligned_cols=68 Identities=19% Similarity=0.363 Sum_probs=54.5
Q ss_pred CC-cEEEEEeCCCChhhhhhHHHHHHHHHHhcCC-CCEEEEEEeCCCcc--------------------------c-ccC
Q 013976 297 SK-DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGV-DSIVIAKMDGTTNE--------------------------H-HRA 347 (432)
Q Consensus 297 ~~-~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~-~~~~~~~id~~~~~--------------------------~-~~~ 347 (432)
++ +++|.||++||++|+.+.|.+.+++..++.. .++.++.|+++... . ..+
T Consensus 25 gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (143)
T 2lus_A 25 DKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKY 104 (143)
Confidence 45 9999999999999999999999999998532 36777777776542 1 467
Q ss_pred CCCCCceEEEEe-CCCcc
Q 013976 348 KSDGFPTILFFP-AGNKS 364 (432)
Q Consensus 348 ~i~~~P~i~~~~-~g~~~ 364 (432)
++.++|+++++. +|..+
T Consensus 105 ~v~~~P~~~lid~~G~i~ 122 (143)
T 2lus_A 105 GITGIPALVIVKKDGTLI 122 (143)
Confidence 899999999996 66554
No 278
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.54 E-value=1.9e-08 Score=78.29 Aligned_cols=78 Identities=18% Similarity=0.351 Sum_probs=55.9
Q ss_pred CcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCc-----c-c-ccCCCCCCceEEEEeCCCcccCceec
Q 013976 298 KDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN-----E-H-HRAKSDGFPTILFFPAGNKSFDPINV 370 (432)
Q Consensus 298 ~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~-----~-~-~~~~i~~~P~i~~~~~g~~~~~~~~y 370 (432)
+.+++ ||++||++|+.+.+.|.+++. .+.++.+|.+.+ . . ..+++.++|++ |.+|+.+. .+
T Consensus 20 ~~vv~-f~a~~C~~C~~~~~~l~~~~~------~~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~~g~~v~---~~ 87 (116)
T 2e7p_A 20 APVVV-FSKTYCGYCNRVKQLLTQVGA------SYKVVELDELSDGSQLQSALAHWTGRGTVPNV--FIGGKQIG---GC 87 (116)
T ss_dssp SSEEE-EECTTCHHHHHHHHHHHHHTC------CCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTEEEE---CH
T ss_pred CCEEE-EECCCChhHHHHHHHHHHcCC------CeEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EECCEEEC---Ch
Confidence 45555 999999999999999988842 356666665554 1 2 46899999999 55776543 44
Q ss_pred cCCC---CHHHHHHHHHhcC
Q 013976 371 DVDR---TVVALYKFLKKNA 387 (432)
Q Consensus 371 ~g~~---~~~~l~~fi~~~~ 387 (432)
.|.. +.+.|.++|++..
T Consensus 88 ~~~~~~~~~~~l~~~l~~~g 107 (116)
T 2e7p_A 88 DTVVEKHQRNELLPLLQDAA 107 (116)
T ss_dssp HHHHHHHHTTCHHHHHHHTT
T ss_pred HHHHHHHhCChHHHHHHHcc
Confidence 4433 5668889998764
No 279
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.54 E-value=2.1e-07 Score=76.83 Aligned_cols=86 Identities=13% Similarity=0.119 Sum_probs=64.3
Q ss_pred CCc-EEEEEe-CCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCC---------------------ccc--ccCCCCC
Q 013976 297 SKD-VLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT---------------------NEH--HRAKSDG 351 (432)
Q Consensus 297 ~~~-~lv~f~-~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~---------------------~~~--~~~~i~~ 351 (432)
++. +||.|| ++||++|....+.+.+++..+++. ++.++.|+++. +.. ..|++.+
T Consensus 28 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~-~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (161)
T 3drn_A 28 GKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDY-DVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKG 106 (161)
T ss_dssp TTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTT-CEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCC
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHc-CCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCC
Confidence 455 999999 999999999999999999999864 68888888862 111 4678888
Q ss_pred ----CceEEEE-eCCCcccCceeccC----CCCHHHHHHHHHhc
Q 013976 352 ----FPTILFF-PAGNKSFDPINVDV----DRTVVALYKFLKKN 386 (432)
Q Consensus 352 ----~P~i~~~-~~g~~~~~~~~y~g----~~~~~~l~~fi~~~ 386 (432)
+|+++++ ++|..+. .+.| ....+.+++.|++.
T Consensus 107 ~~~~~P~~~lid~~G~i~~---~~~g~~~~~~~~~~il~~l~~l 147 (161)
T 3drn_A 107 FILPARITFVIDKKGIIRH---IYNSQMNPANHVNEALKALKQI 147 (161)
T ss_dssp SSSCCCEEEEECTTSBEEE---EEECSSCTTHHHHHHHHHHHHH
T ss_pred cCcccceEEEECCCCEEEE---EEecCCCCCcCHHHHHHHHHHh
Confidence 9999999 5665543 4555 23345666666543
No 280
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.53 E-value=1.9e-07 Score=77.69 Aligned_cols=89 Identities=15% Similarity=0.144 Sum_probs=68.8
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCC-------cc-c-----c-cC--------------
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-------NE-H-----H-RA-------------- 347 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~-------~~-~-----~-~~-------------- 347 (432)
.++++||.||++||++|....|.+.+++..+++. ++.++.|+++. .. . . ++
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 109 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQ-GLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNG 109 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSS
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccC-CEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCC
Confidence 4689999999999999999999999999999864 69999998752 00 0 1 11
Q ss_pred ---------------CC--CCCc---eEEEE-eCCCcccCceeccCCCCHHHHHHHHHhcCC
Q 013976 348 ---------------KS--DGFP---TILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 388 (432)
Q Consensus 348 ---------------~i--~~~P---~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 388 (432)
++ .++| +.+++ ++|..+. .+.|..+.+.|.++|++.++
T Consensus 110 ~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~---~~~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 110 ENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVD---RYYPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp TTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEE---EECTTSCGGGGHHHHHHHTT
T ss_pred CchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEE---eeCCCCCHHHHHHHHHHHhh
Confidence 23 5678 77777 7776654 67788888899999988764
No 281
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.52 E-value=1.4e-07 Score=78.79 Aligned_cols=88 Identities=14% Similarity=0.105 Sum_probs=67.7
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCC-----------------cc-----------c---
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-----------------NE-----------H--- 344 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~-----------------~~-----------~--- 344 (432)
.++++||.||++||++|+ ..|.+.++...+++. ++.++.|+++. .. .
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~-~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~ 108 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDE-GFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNG 108 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGG-TEEEEEEEECSCC------------------CCCSCBBCCCBSSS
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccC-CeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCC
Confidence 468999999999999999 999999999999873 58888887631 00 0
Q ss_pred ------------ccCCCCCCc------eEEEE-eCCCcccCceeccCCCCHHHHHHHHHhcCC
Q 013976 345 ------------HRAKSDGFP------TILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 388 (432)
Q Consensus 345 ------------~~~~i~~~P------~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 388 (432)
..+++.++| +.+++ ++|..+. .+.|..+.+.|.+.|++.++
T Consensus 109 ~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~---~~~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 109 GNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYE---RYSSLTKPSSLSETIEELLK 168 (171)
T ss_dssp TTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEE---EECTTSCGGGGHHHHHHHHT
T ss_pred ccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEE---EeCCCCCHHHHHHHHHHHHH
Confidence 024677899 77666 7776654 67788888889998888764
No 282
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.52 E-value=1e-07 Score=79.31 Aligned_cols=89 Identities=9% Similarity=-0.031 Sum_probs=66.9
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCc------c---cc---------------------
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN------E---HH--------------------- 345 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~------~---~~--------------------- 345 (432)
.++++||.||++||++|....|.+.++...+++. ++.++.|+++.. . ..
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 108 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGK-GLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNG 108 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCSS
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcC-CeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeecC
Confidence 4689999999999999999999999999999863 689999987530 0 00
Q ss_pred -----cC--------C-----CCCCceEEEE-eCCCcccCceeccCCCCHHHHHHHHHhcCC
Q 013976 346 -----RA--------K-----SDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 388 (432)
Q Consensus 346 -----~~--------~-----i~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 388 (432)
.+ + +..+|+++++ ++|..+. .+.|..+.+.|.+.|++.++
T Consensus 109 ~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~i~~ll~ 167 (169)
T 2v1m_A 109 SDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVK---RYSPTTAPYDIEGDIMELLE 167 (169)
T ss_dssp TTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEE---EECTTSCGGGGHHHHHHHHH
T ss_pred ccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEE---EcCCCCCHHHHHHHHHHHhc
Confidence 00 2 3445888777 6676654 67787788888888887654
No 283
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.49 E-value=1.7e-07 Score=79.85 Aligned_cols=89 Identities=12% Similarity=0.040 Sum_probs=69.7
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCc-----------------------------cc--
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN-----------------------------EH-- 344 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~-----------------------------~~-- 344 (432)
.++++||.||++||++|....|.+.++...+++. ++.++.|+++.. +.
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~-~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~ 125 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ-GFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNG 125 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSS
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcC-CeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCc
Confidence 4689999999999999999999999999999863 588888887620 00
Q ss_pred c------------cCCCCCCc------eEEEE-eCCCcccCceeccCCCCHHHHHHHHHhcCC
Q 013976 345 H------------RAKSDGFP------TILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNAS 388 (432)
Q Consensus 345 ~------------~~~i~~~P------~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~ 388 (432)
. .+++.++| +.+++ ++|+.+. .+.|..+.+.|.+.|++.++
T Consensus 126 ~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~---~~~g~~~~~~l~~~i~~ll~ 185 (190)
T 2vup_A 126 ENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVE---RFSPGASVKDIEKKLIPLLE 185 (190)
T ss_dssp TTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEE---EECTTCCHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEE---EECCCCCHHHHHHHHHHHHh
Confidence 0 13667788 66666 7777654 67788899999999988764
No 284
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.48 E-value=3.2e-07 Score=77.51 Aligned_cols=87 Identities=10% Similarity=-0.052 Sum_probs=65.3
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCc----------------------------cc--c
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN----------------------------EH--H 345 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~----------------------------~~--~ 345 (432)
.++++||.||++||++|....|.+.++...+++. ++.++.|+++.. +. .
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~-~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAEC-GLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGD 124 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSST
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcC-CeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCCc
Confidence 4689999999999999999999999999999863 689999987520 00 0
Q ss_pred ----cC----------C-----CCCCceEEEE-eCCCcccCceeccCCCCHHHHHHHHHhc
Q 013976 346 ----RA----------K-----SDGFPTILFF-PAGNKSFDPINVDVDRTVVALYKFLKKN 386 (432)
Q Consensus 346 ----~~----------~-----i~~~P~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~ 386 (432)
.+ + +..+|+++++ ++|..+. .+.|..+.+.|.+.|++.
T Consensus 125 ~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~---~~~g~~~~~~l~~~i~~l 182 (183)
T 2obi_A 125 DAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVK---RYGPMEEPLVIEKDLPHY 182 (183)
T ss_dssp TSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEE---EECTTSCTHHHHTTSGGG
T ss_pred chhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEE---EeCCCCCHHHHHHHHHHh
Confidence 01 2 3345998888 6676654 677888888888877654
No 285
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=97.87 E-value=1.6e-08 Score=80.33 Aligned_cols=102 Identities=7% Similarity=0.076 Sum_probs=81.3
Q ss_pred CchhhhccCCCcceEEEEEeC-cchhhhHHHH---HHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEEEEe
Q 013976 159 ENAPSVFESPIKNQLLLFAVS-NDSEKLLPVF---EEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTG 234 (432)
Q Consensus 159 ~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~---~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~ 234 (432)
+.+......++++++.||++| +.|+.+.+.+ .++++.+.+++.|+.+|++... ...+++.|++.+. |++++++
T Consensus 10 ~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-~~~~~~~~~v~~~--Pt~~~~d 86 (130)
T 2lst_A 10 EALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPE-GQELARRYRVPGT--PTFVFLV 86 (130)
Confidence 334444456667888899999 9999999999 9999999888999999996433 6688999999988 9999986
Q ss_pred CCCCc---eecCCCCCCHHHHHHHHHHHhcCC
Q 013976 235 NDDAK---KHILDGELTLDKIKTFGEDFLEGK 263 (432)
Q Consensus 235 ~~~~~---~y~~~~~~~~~~i~~fi~~~~~g~ 263 (432)
..+++ ...+.|..+.+.|.++++.++.+.
T Consensus 87 ~~~G~~~~~~~~~G~~~~~~l~~~l~~~~~~~ 118 (130)
T 2lst_A 87 PKAGAWEEVGRLFGSRPRAEFLKELRQVCVKG 118 (130)
Confidence 43333 455788889999999999987643
No 286
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=98.47 E-value=8e-07 Score=71.87 Aligned_cols=104 Identities=13% Similarity=0.153 Sum_probs=81.2
Q ss_pred CCCchhhhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCC------------------------cc
Q 013976 157 TRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDN------------------------ED 211 (432)
Q Consensus 157 ~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~------------------------~~ 211 (432)
+.+.+..-...+++.++.||++| +.|+...+.+.++++++.+++.|+.++++. .+
T Consensus 18 ~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 97 (148)
T 2b5x_A 18 NGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVD 97 (148)
T ss_dssp SCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEEC
T ss_pred cCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEEC
Confidence 34444333335667788899999 999999999999999999889999998653 11
Q ss_pred cccchhhhhCCCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcC
Q 013976 212 VGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 262 (432)
Q Consensus 212 ~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g 262 (432)
....+++.||+... |++++++.++...+.+.|..+.+.+.++++..+.+
T Consensus 98 ~~~~~~~~~~v~~~--P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 146 (148)
T 2b5x_A 98 SDHALTDAFENEYV--PAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLAE 146 (148)
T ss_dssp SSCHHHHHTCCCCS--SEEEEECTTCBEEEEEESCSTTHHHHHHHHHHHTT
T ss_pred CchhHHHHhCCCCC--CEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHhc
Confidence 14578899999887 99999976655566677888999999999998763
No 287
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.46 E-value=4e-07 Score=76.78 Aligned_cols=88 Identities=13% Similarity=0.060 Sum_probs=67.2
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCc-------cc------cc----------------
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN-------EH------HR---------------- 346 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~-------~~------~~---------------- 346 (432)
.++++||.||++||++|....|.+.+++..+++. ++.++.|+++.. .. .+
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~-~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g 126 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPH-HFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTG 126 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSS
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcC-CEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCC
Confidence 4689999999999999999999999999999873 699999987530 00 01
Q ss_pred --------CCCCCCc-------eEEEE-eCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 347 --------AKSDGFP-------TILFF-PAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 347 --------~~i~~~P-------~i~~~-~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
+.+..+| +.+++ ++|..+. .+.|..+.+.|.+.|++.+
T Consensus 127 ~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~---~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 127 TGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVG---AWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp TTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEE---EECTTSCHHHHHHHHHTTC
T ss_pred ccchhhhhhhhhcCCCccccceeEEEEcCCCCEEE---EeCCCCCHHHHHHHHHHHh
Confidence 1144578 55555 7777654 6788889999999998765
No 288
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.45 E-value=1.7e-07 Score=68.16 Aligned_cols=73 Identities=15% Similarity=0.164 Sum_probs=55.8
Q ss_pred EEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc-----c-ccCC--CCCCceEEEEeCCCcccCceeccC
Q 013976 301 LLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-----H-HRAK--SDGFPTILFFPAGNKSFDPINVDV 372 (432)
Q Consensus 301 lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~-----~-~~~~--i~~~P~i~~~~~g~~~~~~~~y~g 372 (432)
+++|+++||++|+.+.+.|.+++..+.+ +.+..+|++.+. . ..++ +.++|++ |.+|..+ .|
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~---i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i--~~~g~~i------~~ 71 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERDD---FQYQYVDIRAEGITKEDLQQKAGKPVETVPQI--FVDQQHI------GG 71 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSS---CEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE--EETTEEE------ES
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCC---ceEEEEecccChHHHHHHHHHhCCCCceeCeE--EECCEEE------EC
Confidence 6789999999999999999999988754 889999987654 1 3567 8999998 4466432 22
Q ss_pred CCCHHHHHHHHHhcC
Q 013976 373 DRTVVALYKFLKKNA 387 (432)
Q Consensus 373 ~~~~~~l~~fi~~~~ 387 (432)
.+.|.+++++..
T Consensus 72 ---~~~l~~~~~~~~ 83 (85)
T 1ego_A 72 ---YTDFAAWVKENL 83 (85)
T ss_dssp ---SHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHhc
Confidence 267888887653
No 289
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.44 E-value=3.4e-08 Score=71.16 Aligned_cols=59 Identities=14% Similarity=0.240 Sum_probs=42.7
Q ss_pred EEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCC-Cccc--ccCCCCCCceEEEEeCCC
Q 013976 300 VLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT-TNEH--HRAKSDGFPTILFFPAGN 362 (432)
Q Consensus 300 ~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~-~~~~--~~~~i~~~P~i~~~~~g~ 362 (432)
.+++|+++||++|+.+.+.+++++..+.. .+.+..+|.+ .+.. .++++.++|++++ +|+
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i--~g~ 64 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSKY--TVEIVHLGTDKARIAEAEKAGVKSVPALVI--DGA 64 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTTE--EEEEEETTTCSSTHHHHHHHTCCEEEEEEE--TTE
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcCC--eEEEEEecCChhhHHHHHHcCCCcCCEEEE--CCE
Confidence 47889999999999999999988655432 3555555543 1222 5789999999987 554
No 290
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.43 E-value=5.4e-07 Score=77.79 Aligned_cols=44 Identities=20% Similarity=0.185 Sum_probs=39.4
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCC
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 340 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~ 340 (432)
.++++||.||++||++|....|.+.+++..|++. ++.++.|+++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~-g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPR-GLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCC-CeEEEEEECC
Confidence 4679999999999999999999999999999863 6899999875
No 291
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=98.40 E-value=1.9e-06 Score=68.37 Aligned_cols=91 Identities=19% Similarity=0.231 Sum_probs=73.7
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCc--------------------ccccchhhhhCCCCC
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNE--------------------DVGKPVSEYFGITGE 225 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~--------------------~~~~~l~~~~~i~~~ 225 (432)
.+++.++.||++| +.|+...+.+.+++.++. ++.|+.++++.. +....+++.||+...
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~ 102 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQ 102 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCSS
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCCC
Confidence 4567788899999 999999999999999998 699999998541 114577899999887
Q ss_pred CCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 226 APKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 226 ~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
|++++++.++... .+.|..+.+.|.++++..++
T Consensus 103 --P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 103 --PAYAFVDPHGNVD-VVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp --SEEEEECTTCCEE-EEESCCCHHHHHHHHHHHC-
T ss_pred --ceEEEECCCCCEE-EEecCCCHHHHHHHHHHHhc
Confidence 9999997655444 67788899999999998764
No 292
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.39 E-value=2.2e-06 Score=68.12 Aligned_cols=90 Identities=9% Similarity=0.138 Sum_probs=73.0
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCc-------------------ccccchhhhhCCCCCC
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNE-------------------DVGKPVSEYFGITGEA 226 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~-------------------~~~~~l~~~~~i~~~~ 226 (432)
.+++.++.||++| +.|+...+.+.+++.++. .+.|+.++++.. +....+++.||+...
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~- 100 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQ- 100 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSS-
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCCC-
Confidence 4567788899999 999999999999999998 799999998761 013478899999887
Q ss_pred CcEEEEEeCCCCceecCC---CCCCHHHHHHHHHHHh
Q 013976 227 PKVLAYTGNDDAKKHILD---GELTLDKIKTFGEDFL 260 (432)
Q Consensus 227 ~P~i~i~~~~~~~~y~~~---~~~~~~~i~~fi~~~~ 260 (432)
|++++++.++... .+. |..+.+.|.+++++++
T Consensus 101 -P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 101 -PAFVFYRADGTST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp -SEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred -CEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHHh
Confidence 9999997665444 567 8899999999998864
No 293
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=98.39 E-value=8.1e-07 Score=72.74 Aligned_cols=92 Identities=12% Similarity=0.014 Sum_probs=74.4
Q ss_pred CCCcceEEEE-EeC-cchhhhHHHH---HHHHHhccCceEEEEEecCCcc--------cccchhhhhCCCCCCCcEEEEE
Q 013976 167 SPIKNQLLLF-AVS-NDSEKLLPVF---EEAAKSFKGKLIFVYVQMDNED--------VGKPVSEYFGITGEAPKVLAYT 233 (432)
Q Consensus 167 ~~~~~~i~~~-~~~-~~~~~~~~~~---~~~a~~~~~~i~f~~vd~~~~~--------~~~~l~~~~~i~~~~~P~i~i~ 233 (432)
.+++++|.|| ++| +.|+.+.+.+ .+++..+..++.++.+|++... .+..+++.|++.+. |+++++
T Consensus 46 ~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~--Pt~~~~ 123 (154)
T 2ju5_A 46 DHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGF--PELVFI 123 (154)
T ss_dssp HCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSS--SEEEEE
T ss_pred CCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCCC--CEEEEE
Confidence 4667788888 899 9999999999 7887776667999999997631 12478899999987 999999
Q ss_pred eCCCCceecCCCCC--CHHHHHHHHHHHhc
Q 013976 234 GNDDAKKHILDGEL--TLDKIKTFGEDFLE 261 (432)
Q Consensus 234 ~~~~~~~y~~~~~~--~~~~i~~fi~~~~~ 261 (432)
+.++...+.+ |.. +.+.+.++++.++.
T Consensus 124 d~~G~~~~~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 124 DAEGKQLARM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp CTTCCEEEEE-CCCTTCHHHHHHHHHHHHT
T ss_pred cCCCCEEEEe-cCCCCCHHHHHHHHHHHHh
Confidence 7665566667 877 89999999999875
No 294
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.38 E-value=4e-07 Score=77.20 Aligned_cols=89 Identities=13% Similarity=0.090 Sum_probs=69.7
Q ss_pred CCCcEEEEEe-CCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCc------------------------cc---ccC
Q 013976 296 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN------------------------EH---HRA 347 (432)
Q Consensus 296 ~~~~~lv~f~-~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~------------------------~~---~~~ 347 (432)
.++++||.|| ++||++|....+.+.+++..+++. ++.++.|+++.. .. ..|
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~-~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 108 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKL-GVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQF 108 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHT-TEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHc-CCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHh
Confidence 3589999999 999999999999999999999863 688888887641 11 357
Q ss_pred CCC------CCceEEEE-eCCCcccCceeccCC----CCHHHHHHHHHhcCC
Q 013976 348 KSD------GFPTILFF-PAGNKSFDPINVDVD----RTVVALYKFLKKNAS 388 (432)
Q Consensus 348 ~i~------~~P~i~~~-~~g~~~~~~~~y~g~----~~~~~l~~fi~~~~~ 388 (432)
++. .+|+++++ ++|..+. .+.|. .+.+.|.+.|++...
T Consensus 109 ~v~~~~~g~~~P~~~lid~~G~i~~---~~~g~~~~~~~~~~l~~~l~~l~~ 157 (187)
T 1we0_A 109 DVLNEETGLADRGTFIIDPDGVIQA---IEINADGIGRDASTLINKVKAAQY 157 (187)
T ss_dssp TCEETTTTEECEEEEEECTTSBEEE---EEEECTTSCCCTTHHHHHHHHHHH
T ss_pred CCCcCCCCceeeEEEEECCCCeEEE---EEecCCCCCCCHHHHHHHHHHHhh
Confidence 887 89999999 6666543 45453 378889999887764
No 295
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.37 E-value=5.6e-07 Score=76.88 Aligned_cols=88 Identities=14% Similarity=0.138 Sum_probs=69.8
Q ss_pred CCcEEEEEe-CCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCc------------------------cc---ccCC
Q 013976 297 SKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN------------------------EH---HRAK 348 (432)
Q Consensus 297 ~~~~lv~f~-~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~------------------------~~---~~~~ 348 (432)
++++||.|| ++||++|....+.+.++...++.. ++.++.|+++.. .. ..|+
T Consensus 45 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 123 (195)
T 2bmx_A 45 GKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDR-DAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAG 123 (195)
T ss_dssp TCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHT
T ss_pred CCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhC
Confidence 579999999 999999999999999999999863 688888888641 01 2468
Q ss_pred CC-----CCceEEEE-eCCCcccCceeccCC----CCHHHHHHHHHhcCC
Q 013976 349 SD-----GFPTILFF-PAGNKSFDPINVDVD----RTVVALYKFLKKNAS 388 (432)
Q Consensus 349 i~-----~~P~i~~~-~~g~~~~~~~~y~g~----~~~~~l~~fi~~~~~ 388 (432)
+. .+|+++++ ++|..+. .+.|. .+.+.|.+.|++...
T Consensus 124 v~~~~g~~~P~~~lid~~G~i~~---~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 124 VLNADGVADRVTFIVDPNNEIQF---VSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp CBCTTSSBCEEEEEECTTSBEEE---EEEECTTCCCCHHHHHHHHHHHHC
T ss_pred CcccCCCccceEEEEcCCCeEEE---EEecCCCCCCCHHHHHHHHHHHhh
Confidence 88 89999999 5665543 44453 378999999998876
No 296
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.36 E-value=5.7e-07 Score=74.06 Aligned_cols=85 Identities=14% Similarity=0.097 Sum_probs=63.7
Q ss_pred CcEEEEEe-CCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCc----------------------cc---ccCCCC-
Q 013976 298 KDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN----------------------EH---HRAKSD- 350 (432)
Q Consensus 298 ~~~lv~f~-~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~----------------------~~---~~~~i~- 350 (432)
++++|.|| ++||++|....+.+.+++..+++. ++.++.|+++.. .. ..|++.
T Consensus 37 ~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~-~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~ 115 (160)
T 1xvw_A 37 KNVLLVFFPLAFTGICQGELDQLRDHLPEFEND-DSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGVFN 115 (160)
T ss_dssp CEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSS-SEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTCEE
T ss_pred CCEEEEEECCCCCCchHHHHHHHHHHHHHHHHC-CcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCCcc
Confidence 48999998 999999999999999999998753 688888887641 11 467887
Q ss_pred ---CCc--eEEEE-eCCCcccCceeccCC----CCHHHHHHHHHhc
Q 013976 351 ---GFP--TILFF-PAGNKSFDPINVDVD----RTVVALYKFLKKN 386 (432)
Q Consensus 351 ---~~P--~i~~~-~~g~~~~~~~~y~g~----~~~~~l~~fi~~~ 386 (432)
++| +++++ ++|..+. .+.|. ...+.+++.|++.
T Consensus 116 ~~~~~p~~~~~lid~~G~i~~---~~~g~~~~~~~~~~l~~~l~~l 158 (160)
T 1xvw_A 116 EQAGIANRGTFVVDRSGIIRF---AEMKQPGEVRDQRLWTDALAAL 158 (160)
T ss_dssp TTTTEECSEEEEECTTSBEEE---EEECCTTCCCCHHHHHHHHHHT
T ss_pred ccCCCeeeeEEEECCCCeEEE---EEecCCCCCCCHHHHHHHHHHh
Confidence 889 66666 6666543 44453 3567888877754
No 297
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=98.34 E-value=2.1e-07 Score=70.41 Aligned_cols=93 Identities=10% Similarity=0.061 Sum_probs=73.2
Q ss_pred CCCchhhhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccc----hhhhhCCC-CCCCcEE
Q 013976 157 TRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKP----VSEYFGIT-GEAPKVL 230 (432)
Q Consensus 157 ~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~----l~~~~~i~-~~~~P~i 230 (432)
+.+.++.++..+.+.++.++++| +.|+.+.+.+++++.. +++.|+.+|.++ +++ ++..+||. .. |++
T Consensus 13 s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~~v~~~~vdVde---~r~~Sn~IA~~~~V~h~s--Pq~ 85 (112)
T 3iv4_A 13 SIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYE--RDMDGYYLIVQQ---ERDLSDYIAKKTNVKHES--PQA 85 (112)
T ss_dssp SHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--HTCCEEEEEGGG---GHHHHHHHHHHHTCCCCS--SEE
T ss_pred CHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--CCceEEEEEeec---CchhhHHHHHHhCCccCC--CeE
Confidence 44557777776777788888999 9999999999999985 569999999998 445 79999998 46 999
Q ss_pred EEEeCCCCceecCCCCCCHHHHHHHH
Q 013976 231 AYTGNDDAKKHILDGELTLDKIKTFG 256 (432)
Q Consensus 231 ~i~~~~~~~~y~~~~~~~~~~i~~fi 256 (432)
+++.+++.....--+.++.+.|.+.+
T Consensus 86 il~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 86 FYFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp EEEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred EEEECCEEEEEeeccccCHHHHHHhh
Confidence 99977753333345678988887765
No 298
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.34 E-value=4.5e-07 Score=77.70 Aligned_cols=88 Identities=8% Similarity=0.069 Sum_probs=68.5
Q ss_pred CCCcEEEEEe-CCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCc---------------------------cc---
Q 013976 296 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN---------------------------EH--- 344 (432)
Q Consensus 296 ~~~~~lv~f~-~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~---------------------------~~--- 344 (432)
.++++||.|| ++||++|....|.+.+++..+++. ++.++.|+++.. ..
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEK-GFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSIS 110 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHc-CCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHH
Confidence 3579999999 999999999999999999999763 688888887641 01
Q ss_pred ccCCCC-----CCceEEEE-eCCCcccCceeccCCC----CHHHHHHHHHhcC
Q 013976 345 HRAKSD-----GFPTILFF-PAGNKSFDPINVDVDR----TVVALYKFLKKNA 387 (432)
Q Consensus 345 ~~~~i~-----~~P~i~~~-~~g~~~~~~~~y~g~~----~~~~l~~fi~~~~ 387 (432)
..|++. .+|+++++ ++|..+. .+.|.. +.+.|.+.|++..
T Consensus 111 ~~~~v~~~~g~~~P~~~lid~~G~i~~---~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 111 RDYDVLFEEAIALRGAFLIDKNMKVRH---AVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp HHTTCEETTTEECEEEEEEETTTEEEE---EEEESSSCCCHHHHHHHHHHHHH
T ss_pred HHhCCcccCCcccceEEEECCCCEEEE---EEecCCCCCCCHHHHHHHHHHHH
Confidence 357888 99999999 5665543 444533 6889999988775
No 299
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=98.33 E-value=1.4e-06 Score=72.76 Aligned_cols=102 Identities=12% Similarity=0.098 Sum_probs=76.7
Q ss_pred ecCCCchhhhc----cCCCcceEEEEEeC-cchhhhHHHH---HHHHHhccCceEEEEEecCCcccccch----------
Q 013976 155 IFTRENAPSVF----ESPIKNQLLLFAVS-NDSEKLLPVF---EEAAKSFKGKLIFVYVQMDNEDVGKPV---------- 216 (432)
Q Consensus 155 ~l~~~~~~~~~----~~~~~~~i~~~~~~-~~~~~~~~~~---~~~a~~~~~~i~f~~vd~~~~~~~~~l---------- 216 (432)
..+..++...+ ..+++++|.||++| +.|+.+.+.+ .++.+.+++++.|+.+|++.. ..+
T Consensus 30 ~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~---~~~~~~~~~~~~~ 106 (172)
T 3f9u_A 30 HAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNK---TPLTEPVKIMENG 106 (172)
T ss_dssp CCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCC---CEEEEEEEEEETT
T ss_pred ccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcc---cccchhhhhhhcc
Confidence 34555555544 56778888999999 9999974444 556666666799999999863 233
Q ss_pred ----------------hhhhCCCCCCCcEEEEEeCCCCceecCCCCCC-HHHHHHHHHHHhc
Q 013976 217 ----------------SEYFGITGEAPKVLAYTGNDDAKKHILDGELT-LDKIKTFGEDFLE 261 (432)
Q Consensus 217 ----------------~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~~~-~~~i~~fi~~~~~ 261 (432)
++.||+.+. |++++++.++.....+.|..+ .+.+.+|+++.+.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~v~~~--Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l~ 166 (172)
T 3f9u_A 107 TERTLRTVGDKWSYLQRVKFGANAQ--PFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGLE 166 (172)
T ss_dssp EEEEEEEHHHHHHHHHHHHHSCCCS--SEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhhHHHHHHcCCCCc--ceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHHH
Confidence 688999987 999999766655566678888 9999999988764
No 300
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=98.32 E-value=3.6e-07 Score=79.27 Aligned_cols=102 Identities=11% Similarity=0.105 Sum_probs=79.1
Q ss_pred CCceeec-CCCchhhhccCC---CcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCC
Q 013976 150 LPLVTIF-TRENAPSVFESP---IKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITG 224 (432)
Q Consensus 150 ~p~v~~l-~~~~~~~~~~~~---~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~ 224 (432)
...|.++ +.++|...+... .+++|.||++| ++|+.+.+.|.++|.+|. .+.|+.+|++ ++.++..|++..
T Consensus 98 ~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~v~f~~vd~~----~~~l~~~~~i~~ 172 (217)
T 2trc_P 98 YGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-MVKFCKIRAS----NTGAGDRFSSDV 172 (217)
T ss_dssp CCSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-TSEEEEEEHH----HHTCSTTSCGGG
T ss_pred CCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEEECC----cHHHHHHCCCCC
Confidence 3457777 778887766433 67788899999 999999999999999996 5999999997 346788999998
Q ss_pred CCCcEEEEEeCCCCceecCCCC-------CCHHHHHHHHHHH
Q 013976 225 EAPKVLAYTGNDDAKKHILDGE-------LTLDKIKTFGEDF 259 (432)
Q Consensus 225 ~~~P~i~i~~~~~~~~y~~~~~-------~~~~~i~~fi~~~ 259 (432)
. |+++++.++. ....+.|. ++.+.|..|+..+
T Consensus 173 ~--PTl~~~~~G~-~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 173 L--PTLLVYKGGE-LISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp C--SEEEEEETTE-EEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred C--CEEEEEECCE-EEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 8 9999887543 22334443 4468999999874
No 301
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.32 E-value=1.5e-06 Score=73.22 Aligned_cols=45 Identities=13% Similarity=0.044 Sum_probs=40.0
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCC
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 341 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~ 341 (432)
.++.+||.||++||++|....|.+.+++..|++. ++.++.|+++.
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~-~~~vi~is~d~ 81 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPS-HFSVLAFPCNQ 81 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTT-SEEEEEEECCC
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccC-CeEEEEEECCc
Confidence 4679999999999999999999999999999874 68899888754
No 302
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=98.31 E-value=4.2e-06 Score=69.02 Aligned_cols=93 Identities=15% Similarity=0.197 Sum_probs=73.9
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCc-eEEEEEecCCcccccchhhhh------------------------
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNEDVGKPVSEYF------------------------ 220 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~-i~f~~vd~~~~~~~~~l~~~~------------------------ 220 (432)
.+++.++.||++| +.|....+.+.+++.++.+. +.|+.++++.. ...++.+
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQ---LPNVKNYMKTQGIIYPVMMATPELIRAFNGY 109 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCC---HHHHHHHHHHHTCCSCEEECCHHHHHHHHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCC---HHHHHHHHHHcCCCCceEecCHHHHHHHhhh
Confidence 4567788899999 89999999999999999875 99999998863 2344444
Q ss_pred ---CCCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcCCc
Q 013976 221 ---GITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKL 264 (432)
Q Consensus 221 ---~i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g~l 264 (432)
++... |++++++.++...+.+.|..+.+.+.++|+..+....
T Consensus 110 ~~~~i~~~--P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~~~ 154 (165)
T 3or5_A 110 IDGGITGI--PTSFVIDASGNVSGVIVGPRSKADFDRIVKMALGAKA 154 (165)
T ss_dssp STTCSCSS--SEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC---
T ss_pred hccCCCCC--CeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHhhhc
Confidence 77776 9998887766556677898999999999999986443
No 303
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=98.29 E-value=5.3e-06 Score=67.50 Aligned_cols=99 Identities=15% Similarity=0.103 Sum_probs=77.8
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCc-eEEEEEecCCc--------------------ccccchhhhhCCCC
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNE--------------------DVGKPVSEYFGITG 224 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~-i~f~~vd~~~~--------------------~~~~~l~~~~~i~~ 224 (432)
.+++.++.||++| +.|+...+.+.++++++.+. +.|+.++.+.. +....+++.||+..
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 106 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQV 106 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCCc
Confidence 4567788889999 89999999999999999864 77777663210 01456889999988
Q ss_pred CCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcCCcCcc
Q 013976 225 EAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKLKPF 267 (432)
Q Consensus 225 ~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g~l~~~ 267 (432)
. |++++++.++...+.+.|..+.+.|.++|+..+.+.-.+-
T Consensus 107 ~--P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~~~~~~ 147 (153)
T 2l5o_A 107 Y--PTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWRNSDAEG 147 (153)
T ss_dssp S--SEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHHCCSSCC
T ss_pred c--CeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHhhhhcc
Confidence 7 9999987666556667888999999999999998765543
No 304
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=98.28 E-value=2.1e-06 Score=69.10 Aligned_cols=88 Identities=16% Similarity=0.180 Sum_probs=72.9
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhcc-CceEEEEEecCC-----------------------cccccchhhhhC
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFK-GKLIFVYVQMDN-----------------------EDVGKPVSEYFG 221 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~-~~i~f~~vd~~~-----------------------~~~~~~l~~~~~ 221 (432)
.++++++.||++| +.|+...+.+.++++++. ..+.|+.++++. .. ...+++.|+
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~ 111 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDS-KGELMKEYH 111 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECS-SSHHHHHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcC-chhHHHhcC
Confidence 5667788899999 899999999999999998 569999998864 11 447889999
Q ss_pred CCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHH
Q 013976 222 ITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGE 257 (432)
Q Consensus 222 i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~ 257 (432)
+... |++++++.++...+.+.|..+.+.|.++++
T Consensus 112 v~~~--P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 145 (145)
T 3erw_A 112 IITI--PTSFLLNEKGEIEKTKIGPMTAEQLKEWTE 145 (145)
T ss_dssp CCEE--SEEEEECTTCCEEEEEESCCCHHHHHHHHC
T ss_pred cCcc--CeEEEEcCCCcEEEEEcCCcCHHHHHHhhC
Confidence 9887 999999776656667789899999998874
No 305
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.28 E-value=1.4e-06 Score=73.65 Aligned_cols=44 Identities=9% Similarity=-0.002 Sum_probs=39.3
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCC
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 340 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~ 340 (432)
.++++||.||++||++|....|.+.++...+++. ++.++.|+++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~-~v~vv~is~d 91 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAEC-GLRILAFPCN 91 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECC
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcC-CeEEEEEECc
Confidence 4589999999999999999999999999999863 6899989875
No 306
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=98.28 E-value=4.8e-06 Score=67.69 Aligned_cols=97 Identities=12% Similarity=0.095 Sum_probs=76.3
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccC-ceEEEEEecCCcc---------------------cccchhhhhC--
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNED---------------------VGKPVSEYFG-- 221 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~-~i~f~~vd~~~~~---------------------~~~~l~~~~~-- 221 (432)
.++++++.||++| +.|....+.+.+++.++++ .+.|+.|+++..+ ....+++.||
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNT 102 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCc
Confidence 4667788899999 8899999999999999964 5999999886211 1345677888
Q ss_pred CCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcCCcC
Q 013976 222 ITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKLK 265 (432)
Q Consensus 222 i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g~l~ 265 (432)
+... |++++++.++...+.+.|..+.+.|.++++....+.-.
T Consensus 103 v~~~--P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~~~~~ 144 (151)
T 3raz_A 103 VGVL--PFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHSKCRE 144 (151)
T ss_dssp SCCS--SEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHTC---
T ss_pred cCCC--CEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHHHhhc
Confidence 6665 99989987776777889999999999999998876543
No 307
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=98.26 E-value=1.3e-06 Score=76.92 Aligned_cols=102 Identities=11% Similarity=0.103 Sum_probs=79.9
Q ss_pred CCceeec-CCCchhhhcc---CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCC
Q 013976 150 LPLVTIF-TRENAPSVFE---SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITG 224 (432)
Q Consensus 150 ~p~v~~l-~~~~~~~~~~---~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~ 224 (432)
...|.++ +.++|...+. .+.+++|.||++| ++|+.+.+.|.++|.+|.+ +.|+.||++. ..++..|++.+
T Consensus 111 ~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~-v~f~kVd~d~----~~l~~~~~I~~ 185 (245)
T 1a0r_P 111 YGFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM-VKFCKIKASN----TGAGDRFSSDV 185 (245)
T ss_dssp CCSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT-SEEEEEEHHH----HCCTTSSCTTT
T ss_pred CCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC-CEEEEEeCCc----HHHHHHCCCCC
Confidence 3467777 6788877663 3567788899999 9999999999999999987 9999999975 36788999988
Q ss_pred CCCcEEEEEeCCCCceecCCC-------CCCHHHHHHHHHHH
Q 013976 225 EAPKVLAYTGNDDAKKHILDG-------ELTLDKIKTFGEDF 259 (432)
Q Consensus 225 ~~~P~i~i~~~~~~~~y~~~~-------~~~~~~i~~fi~~~ 259 (432)
. |+++++..+. ....+.| .++.+.|..|+..+
T Consensus 186 ~--PTll~~~~G~-~v~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 186 L--PTLLVYKGGE-LLSNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp C--SEEEEEETTE-EEEEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred C--CEEEEEECCE-EEEEEeCCcccccccccHHHHHHHHHHc
Confidence 8 9998887543 2122222 36788999999885
No 308
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=98.24 E-value=5.1e-06 Score=67.45 Aligned_cols=97 Identities=13% Similarity=0.178 Sum_probs=76.4
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccC-ceEEEEEecCCcc-------------------cccchhhhhCCCCC
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNED-------------------VGKPVSEYFGITGE 225 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~-~i~f~~vd~~~~~-------------------~~~~l~~~~~i~~~ 225 (432)
.+++.++.||++| +.|+...+.+.+++.++.+ .+.|+.++++... ....+++.||+...
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 104 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPL 104 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCC
Confidence 4567788889999 9999999999999999986 4889888886420 02367889999887
Q ss_pred CCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcCCcC
Q 013976 226 APKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKLK 265 (432)
Q Consensus 226 ~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g~l~ 265 (432)
|++++++.++...+.+.|..+.+.|.++++..+++...
T Consensus 105 --P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~~~~ 142 (151)
T 2f9s_A 105 --PTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPGETS 142 (151)
T ss_dssp --CEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSCC---
T ss_pred --CeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHhhhhc
Confidence 99988876655556677888999999999999876543
No 309
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=98.24 E-value=5.8e-06 Score=67.15 Aligned_cols=95 Identities=14% Similarity=0.114 Sum_probs=76.8
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccC-ceEEEEEecCCcc--------------------cccchhhhhCCCC
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNED--------------------VGKPVSEYFGITG 224 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~-~i~f~~vd~~~~~--------------------~~~~l~~~~~i~~ 224 (432)
.+++.++.||++| +.|+...+.+.++++++.+ .+.|+.++++... ....+++.||+..
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 108 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLING 108 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCS
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCC
Confidence 3556778888999 9999999999999999987 4999999887631 0126788899988
Q ss_pred CCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcCC
Q 013976 225 EAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGK 263 (432)
Q Consensus 225 ~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g~ 263 (432)
. |++++++.++...+.+.|..+.+.|.++++..+.+.
T Consensus 109 ~--P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 145 (152)
T 2lja_A 109 I--PRFILLDRDGKIISANMTRPSDPKTAEKFNELLGLE 145 (152)
T ss_dssp S--CCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHTCC
T ss_pred C--CEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhccc
Confidence 7 999999866656666778889999999999988754
No 310
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.23 E-value=7.1e-07 Score=64.20 Aligned_cols=71 Identities=6% Similarity=0.024 Sum_probs=51.7
Q ss_pred EEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--c---cCCCCCCceEEEEeCCCcccCceeccCCCC
Q 013976 301 LLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--H---RAKSDGFPTILFFPAGNKSFDPINVDVDRT 375 (432)
Q Consensus 301 lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~---~~~i~~~P~i~~~~~g~~~~~~~~y~g~~~ 375 (432)
+++|+++||++|+.+.+.+.++ ++.+..+|++.+.. . ++++.++|+++ .+|.. .++.+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~--------~i~~~~vdi~~~~~~~~~~~~~g~~~vP~~~--~~g~~-------~~g~~ 65 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR--------GFDFEMINVDRVPEAAEALRAQGFRQLPVVI--AGDLS-------WSGFR 65 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT--------TCCCEEEETTTCHHHHHHHHHTTCCSSCEEE--ETTEE-------EESCC
T ss_pred EEEEcCCCChhHHHHHHHHHHC--------CCCeEEEECCCCHHHHHHHHHhCCCccCEEE--ECCEE-------EecCC
Confidence 6789999999999999988864 46777889887644 2 47999999983 35532 23467
Q ss_pred HHHHHHHHHhcCC
Q 013976 376 VVALYKFLKKNAS 388 (432)
Q Consensus 376 ~~~l~~fi~~~~~ 388 (432)
.+.|.++|.++++
T Consensus 66 ~~~l~~~l~~~~~ 78 (81)
T 1h75_A 66 PDMINRLHPAPHA 78 (81)
T ss_dssp HHHHGGGSCCC--
T ss_pred HHHHHHHHhcccc
Confidence 7888887766543
No 311
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.22 E-value=2.3e-06 Score=73.10 Aligned_cols=88 Identities=10% Similarity=0.053 Sum_probs=67.2
Q ss_pred CCCcEEEEEe-CCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc-----------------------------c-
Q 013976 296 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-----------------------------H- 344 (432)
Q Consensus 296 ~~~~~lv~f~-~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~-----------------------------~- 344 (432)
.++++||+|| ++||.+|....+.+.+++..|++. ++.++.|+++... .
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~ 111 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKL-GCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLS 111 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHH
Confidence 3578999999 999999999999999999999763 6889988887421 0
Q ss_pred ccCCCC------CCceEEEE-eCCCcccCceeccC----CCCHHHHHHHHHhcC
Q 013976 345 HRAKSD------GFPTILFF-PAGNKSFDPINVDV----DRTVVALYKFLKKNA 387 (432)
Q Consensus 345 ~~~~i~------~~P~i~~~-~~g~~~~~~~~y~g----~~~~~~l~~fi~~~~ 387 (432)
..|++. .+|+++++ ++|..+. .+.| .++.+.+++.|+...
T Consensus 112 ~~~gv~~~~~~~~~P~~~lid~~G~i~~---~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 112 EDYGVLKTDEGIAYRGLFIIDGKGVLRQ---ITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEE---EEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHcCCccCCCCceeeEEEEECCCCcEEE---EEeCCCCCCCCHHHHHHHHHhcc
Confidence 246777 79999998 5565432 3334 457889999988764
No 312
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.22 E-value=5e-06 Score=69.28 Aligned_cols=91 Identities=11% Similarity=0.168 Sum_probs=67.4
Q ss_pred CCCcEEEEEeCCCCh-hhhhhHHHHHHHHHHhcCCC-CEEEEEEeCCCc--cc-------cc------------------
Q 013976 296 ESKDVLLEIYAPWCG-HCQAFEPTYNKLAKHLRGVD-SIVIAKMDGTTN--EH-------HR------------------ 346 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~-~c~~~~~~~~~la~~~~~~~-~~~~~~id~~~~--~~-------~~------------------ 346 (432)
.++++||.||++||. +|....+.+.++...++... ++.++.|+++.. .. .+
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 468899999999999 99999999999999987642 488888887631 00 00
Q ss_pred -------------------CCCCCCceEEEE-eCCCcccCceeccCCC--CHHHHHHHHHhcCCC
Q 013976 347 -------------------AKSDGFPTILFF-PAGNKSFDPINVDVDR--TVVALYKFLKKNASI 389 (432)
Q Consensus 347 -------------------~~i~~~P~i~~~-~~g~~~~~~~~y~g~~--~~~~l~~fi~~~~~~ 389 (432)
+.+...|+++++ ++|..+. .+.|.. +.+.|.+.|++.++.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~---~~~g~~~~~~~~l~~~l~~ll~~ 173 (174)
T 1xzo_A 112 IEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLK---DYNGVENTPYDDIISDVKSASTL 173 (174)
T ss_dssp HHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEE---EEESSSSCCHHHHHHHHHHHTCC
T ss_pred HHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEE---EEcCCCCCCHHHHHHHHHHHHhc
Confidence 235668987777 5665543 566754 589999999987653
No 313
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.20 E-value=3.3e-05 Score=76.40 Aligned_cols=181 Identities=12% Similarity=0.136 Sum_probs=124.1
Q ss_pred HHHHHHhhc--CCeEEEEEecCCC-cchHHHHH-HHhccCCCceEEEeCcHHHHhHcCCCCCCCCCeEEEEecCCCceec
Q 013976 55 DEAERVLTS--ETKVVLGYLNSLV-GSESEVLA-DASRLEDDVNFYQTTNPDVAKIFHLDSKVNRPALVMVKKETEKISY 130 (432)
Q Consensus 55 ~~l~~~~~~--~~~~vv~f~~~~~-~~~~~~f~-~~a~~~~~~~F~~~~~~~~~~~~~~~~~~~~p~i~l~~~~~~~~~~ 130 (432)
++|+.++.. +++.++.|.++.. ..+.+.|. +++.+.+.+.+-...+. . . ..|++.+.+........
T Consensus 8 ~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~s~~i~~~~~~~~------~-~---~~p~~~~~~~~~~~~i~ 77 (521)
T 1hyu_A 8 TQLRAYLEKLTKPVELIATLDDSAKSAEIKELLAEIAELSDKVTFKEDNTL------P-V---RKPSFLITNPGSQQGPR 77 (521)
T ss_dssp HHHHHHHTTCCSCEEEEEECCSSHHHHHHHHHHHHHHTTCTTEEEEECTTS------S-S---CSSEEEEECTTCCCSCE
T ss_pred HHHHHHHHhCCCCEEEEEEeCCCcchHHHHHHHHHHHHhCCceEEEEcCCc------c-c---CCCEEEEecCCCcceEE
Confidence 556666543 4666666655422 23444554 46777777776443211 0 1 24999999865456678
Q ss_pred ccCCCCCHHHHHHHHHh----cCCCceeecCCCchhhhccCCCc-ceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEE
Q 013976 131 FADGKFDKSTIADFVFS----NKLPLVTIFTRENAPSVFESPIK-NQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVY 204 (432)
Q Consensus 131 y~~g~~~~~~l~~fi~~----~~~p~v~~l~~~~~~~~~~~~~~-~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~ 204 (432)
| .|--.-.++.+||.. ...| ..++.+.+..+.....+ .+.+|+++| ++|+.+.+.++++|..+. ++.+..
T Consensus 78 f-~g~p~g~e~~s~~~~l~~~~~~~--~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~-~v~~~~ 153 (521)
T 1hyu_A 78 F-AGSPLGHEFTSLVLALLWTGGHP--SKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP-RIKHTA 153 (521)
T ss_dssp E-ESCCCGGGHHHHHHHHHHHTTCC--CCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-TEEEEE
T ss_pred E-eccCcchhHHHHHHHHHhhcCCC--CCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC-ceEEEE
Confidence 8 777666667777654 3333 45677777766433333 456677889 999999999999999987 699999
Q ss_pred EecCCcccccchhhhhCCCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHH
Q 013976 205 VQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDF 259 (432)
Q Consensus 205 vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~ 259 (432)
+|.+. ++++.+.||+... |++++ ++ +.. ..|..+.+.|.+|+...
T Consensus 154 vd~~~---~~~~~~~~~i~sv--Pt~~i--~g--~~~-~~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 154 IDGGT---FQNEITERNVMGV--PAVFV--NG--KEF-GQGRMTLTEIVAKVDTG 198 (521)
T ss_dssp EETTT---CHHHHHHTTCCSS--SEEEE--TT--EEE-EESCCCHHHHHHHHCCS
T ss_pred Eechh---hHHHHHHhCCCcc--CEEEE--CC--EEE-ecCCCCHHHHHHHHhhc
Confidence 99987 6789999999987 99966 22 222 34888999999998764
No 314
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=98.17 E-value=8.4e-07 Score=73.47 Aligned_cols=98 Identities=14% Similarity=0.165 Sum_probs=72.9
Q ss_pred hhhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEEEEeCCCCce
Q 013976 162 PSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKK 240 (432)
Q Consensus 162 ~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~ 240 (432)
......+++++|.||++| +.|+.+.+.|.+++..+...+.|+.||++... ..++..+++.....|++++++.+....
T Consensus 40 ~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~--~~~~~~~~~~~~~~Pt~~~~d~~G~~~ 117 (164)
T 1sen_A 40 KEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEE--EPKDEDFSPDGGYIPRILFLDPSGKVH 117 (164)
T ss_dssp HHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGG--SCSCGGGCTTCSCSSEEEEECTTSCBC
T ss_pred HHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCc--hHHHHHhcccCCcCCeEEEECCCCCEE
Confidence 334456678899999999 99999999999988777656777888887632 126788888654459999996554444
Q ss_pred ecCCC----------CCCHHHHHHHHHHHhc
Q 013976 241 HILDG----------ELTLDKIKTFGEDFLE 261 (432)
Q Consensus 241 y~~~~----------~~~~~~i~~fi~~~~~ 261 (432)
..+.| ..+.+.|.++++..+.
T Consensus 118 ~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~ 148 (164)
T 1sen_A 118 PEIINENGNPSYKYFYVSAEQVVQGMKEAQE 148 (164)
T ss_dssp TTCCCTTSCTTSTTCCCSHHHHHHHHHHHHH
T ss_pred EEEeCCCCccchhcccCCHHHHHHHHHHHHH
Confidence 44555 3788999999998875
No 315
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.16 E-value=5.2e-06 Score=64.80 Aligned_cols=96 Identities=9% Similarity=0.130 Sum_probs=74.6
Q ss_pred eEEEe-cccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcccccCCCCCCceEEEEe
Q 013976 281 VKIVV-GNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKSDGFPTILFFP 359 (432)
Q Consensus 281 v~~l~-~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~~~~~i~~~P~i~~~~ 359 (432)
+..|+ ..++++++ .....++|-|+++||++| .+.|.++|..+ + .+.|+..+. ..-...++++ .|++++|+
T Consensus 23 ~~~i~s~~e~e~fi-~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~--d~~F~~t~~-~~v~~~~~v~-~~~vvlfk 93 (124)
T 2l4c_A 23 PTWLTDVPAAMEFI-AATEVAVIGFFQDLEIPA---VPILHSMVQKF-P--GVSFGISTD-SEVLTHYNIT-GNTICLFR 93 (124)
T ss_dssp CEECCSHHHHHHHH-HTSSEEEEEECSCTTSTH---HHHHHHHHHHC-T--TSEEEEECC-HHHHHHTTCC-SSCEEEEE
T ss_pred ceEcCCHHHHHHHH-hcCCCEEEEEECCCCChh---HHHHHHHHHhC-C--CceEEEECh-HHHHHHcCCC-CCeEEEEE
Confidence 44454 36677766 556778999999999999 56899999999 5 599998863 2222678887 89999999
Q ss_pred CCCcccCceeccC----CCCHHHHHHHHHhcC
Q 013976 360 AGNKSFDPINVDV----DRTVVALYKFLKKNA 387 (432)
Q Consensus 360 ~g~~~~~~~~y~g----~~~~~~l~~fi~~~~ 387 (432)
.... +.+.|.| ..+.+.|.+||..+.
T Consensus 94 kfde--~~~~~~g~~~~~~~~~~L~~FI~~n~ 123 (124)
T 2l4c_A 94 LVDN--EQLNLEDEDIESIDATKLSRFIEINS 123 (124)
T ss_dssp TTTT--EEEEECHHHHTTCCHHHHHHHHHHHC
T ss_pred cCCC--CceeecCcccCCCCHHHHHHHHHHhc
Confidence 8764 4567886 789999999999864
No 316
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=98.13 E-value=9.8e-06 Score=57.32 Aligned_cols=72 Identities=18% Similarity=0.170 Sum_probs=58.8
Q ss_pred eEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEEEEeCCCCceecCCCCC-CH
Q 013976 172 QLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGEL-TL 249 (432)
Q Consensus 172 ~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~~-~~ 249 (432)
.+.||++| +.|+.+.+.+++++.++.+++.++.+| ...+++.||+.+. |++++ ++ +... .|.. +.
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~------~~~~~~~~~v~~~--Pt~~~--~G--~~~~-~G~~~~~ 69 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK------EMDQILEAGLTAL--PGLAV--DG--ELKI-MGRVASK 69 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC------SHHHHHHHTCSSS--SCEEE--TT--EEEE-CSSCCCH
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec------CHHHHHHCCCCcC--CEEEE--CC--EEEE-cCCCCCH
Confidence 47789999 999999999999999999889999998 2367899999988 99977 22 3222 2876 89
Q ss_pred HHHHHHH
Q 013976 250 DKIKTFG 256 (432)
Q Consensus 250 ~~i~~fi 256 (432)
+.|.+|+
T Consensus 70 ~~l~~~l 76 (77)
T 1ilo_A 70 EEIKKIL 76 (77)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9988875
No 317
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=98.11 E-value=2e-06 Score=65.40 Aligned_cols=76 Identities=14% Similarity=0.089 Sum_probs=59.6
Q ss_pred CcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcc---cccchhhhhCCCCCCCcEEEEEeCCCCceecCC
Q 013976 169 IKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNED---VGKPVSEYFGITGEAPKVLAYTGNDDAKKHILD 244 (432)
Q Consensus 169 ~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~---~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~ 244 (432)
+..++.||++| +.|+.+.+.|.+++..+. .+|++... -++.+++.|||.+. |++++ ++ +. +.
T Consensus 13 k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~------~v~~~~~~~~~~~~~l~~~~~V~~~--PT~~i--~G--~~--~~ 78 (106)
T 3kp8_A 13 QIGGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAGITSY--PTWII--NG--RT--YT 78 (106)
T ss_dssp HHTCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCTTCTTSCCCHHHHHTTCCSS--SEEEE--TT--EE--EE
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHhCC------EEEEecccccchhHHHHHHcCCeEe--CEEEE--CC--EE--ec
Confidence 35688999999 999999999999998775 45555210 15689999999998 99876 22 33 67
Q ss_pred CCCCHHHHHHHHHH
Q 013976 245 GELTLDKIKTFGED 258 (432)
Q Consensus 245 ~~~~~~~i~~fi~~ 258 (432)
|..+.+.|.+|+.-
T Consensus 79 G~~~~~~l~~~~~~ 92 (106)
T 3kp8_A 79 GVRSLEALAVASGY 92 (106)
T ss_dssp SCCCHHHHHHHHTC
T ss_pred CCCCHHHHHHHhCC
Confidence 99999999999854
No 318
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=98.11 E-value=1.4e-05 Score=64.42 Aligned_cols=89 Identities=12% Similarity=0.066 Sum_probs=69.2
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCc-eEEEEEecCCcccccc-------------------------hhhh
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNEDVGKP-------------------------VSEY 219 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~-i~f~~vd~~~~~~~~~-------------------------l~~~ 219 (432)
.+++.++.||++| +.|+...+.+.++++++.++ +.|+.++++.. .. +++.
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~---~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 106 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERK---DEEWLKFIRSKKIGGWLNVRDSKNHTDFKIT 106 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSS---SHHHHHHHHHHTCTTSEEEECTTCCCCHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCC---HHHHHHHHHHcCCCCceEEeccccchhHHHh
Confidence 4567788899999 89999999999999999876 99999998853 23 8899
Q ss_pred hCCCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHh
Q 013976 220 FGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 260 (432)
Q Consensus 220 ~~i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~ 260 (432)
||+... |++++++.++...+.+.|..+.+.+.+.+.+.+
T Consensus 107 ~~i~~~--P~~~lid~~G~i~~~~~g~~~~~~~l~~l~~~l 145 (148)
T 3hcz_A 107 YDIYAT--PVLYVLDKNKVIIAKRIGYENLDDFLVQYEKSL 145 (148)
T ss_dssp HCCCSS--CEEEEECTTCBEEEESCCGGGHHHHHHHHHHHH
T ss_pred cCcCCC--CEEEEECCCCcEEEecCCHHHHHHHHHHHHHHh
Confidence 999887 999999776655666666655555555555443
No 319
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.09 E-value=6.2e-06 Score=58.06 Aligned_cols=67 Identities=10% Similarity=0.149 Sum_probs=50.8
Q ss_pred EEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--c---cCCCCCCceEEEEeCCCcccCceeccCCCC
Q 013976 301 LLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--H---RAKSDGFPTILFFPAGNKSFDPINVDVDRT 375 (432)
Q Consensus 301 lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~---~~~i~~~P~i~~~~~g~~~~~~~~y~g~~~ 375 (432)
+++|+++||++|+.+.+.++++ ++.+..+|++.++. . .+++.++|+++. +|. . .++.+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~--------~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~--~g~------~-~~g~~ 65 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA--------GLAYNTVDISLDDEARDYVMALGYVQAPVVEV--DGE------H-WSGFR 65 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT--------TCCCEEEETTTCHHHHHHHHHTTCBCCCEEEE--TTE------E-EESCC
T ss_pred EEEEeCCCChHHHHHHHHHHHc--------CCCcEEEECCCCHHHHHHHHHcCCCccCEEEE--CCe------E-EcCCC
Confidence 6789999999999999988875 36677788887654 3 688999999974 442 2 33467
Q ss_pred HHHHHHHHH
Q 013976 376 VVALYKFLK 384 (432)
Q Consensus 376 ~~~l~~fi~ 384 (432)
.+.|.++|+
T Consensus 66 ~~~l~~~l~ 74 (75)
T 1r7h_A 66 PERIKQLQA 74 (75)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 888888773
No 320
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=98.09 E-value=1.7e-05 Score=62.73 Aligned_cols=91 Identities=18% Similarity=0.140 Sum_probs=72.4
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCc-------------------------ccccchhhhh
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNE-------------------------DVGKPVSEYF 220 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~-------------------------~~~~~l~~~~ 220 (432)
.+++.++.||++| +.|....+.+.++++++.+.+.++.+++... +....+++.|
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 100 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETY 100 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHHc
Confidence 4567788889999 8999999999999999888899998854220 0134678899
Q ss_pred CCCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHH
Q 013976 221 GITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDF 259 (432)
Q Consensus 221 ~i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~ 259 (432)
|+... |++++++.++...+.+.|..+.+.+.++++.+
T Consensus 101 ~v~~~--P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 101 GVRSY--PTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp TCCSS--SEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred CcccC--CeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 99887 99999977665666778889999999998763
No 321
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=98.08 E-value=3.9e-06 Score=69.19 Aligned_cols=108 Identities=14% Similarity=0.067 Sum_probs=80.0
Q ss_pred ceeecCCCchhhhccCCCcceEEEEEeC-cchhhhHHHHHHHHHhccC-ceEEEEEecCC------------------c-
Q 013976 152 LVTIFTRENAPSVFESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDN------------------E- 210 (432)
Q Consensus 152 ~v~~l~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~-~i~f~~vd~~~------------------~- 210 (432)
.+..++.+.+......++++++.||++| +.|+...+.+.+++++|++ .+.|+.+.++. .
T Consensus 22 ~l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~ 101 (164)
T 2h30_A 22 TMKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYP 101 (164)
T ss_dssp TCEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCT
T ss_pred ccCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCC
Confidence 3445555555544445667888899999 8999999999999999753 36666665421 0
Q ss_pred ------ccccchhhhhCCCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 211 ------DVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 211 ------~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
+....+++.||+... |++++++.++...+.+.|..+.+.|.++++..+.
T Consensus 102 ~~~~~~d~~~~~~~~~~v~~~--P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 102 KLPVVTDNGGTIAQNLNISVY--PSWALIGKDGDVQRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp TSCEEECTTCHHHHHTTCCSS--SEEEEECTTSCEEEEEESCCCHHHHHHHHHCTTC
T ss_pred cceEEEcCchHHHHHcCCCcc--ceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 013467888999887 9999987766566677888999999999999765
No 322
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.07 E-value=2.1e-05 Score=64.80 Aligned_cols=91 Identities=8% Similarity=0.130 Sum_probs=71.1
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecC------------------Ccc--------------c-
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMD------------------NED--------------V- 212 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~------------------~~~--------------~- 212 (432)
.++++++.||++| +.|....+.+.++++++. .+.|+.++++ ... +
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWI 114 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSE
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCee
Confidence 4567788899999 999999999999999999 7999999887 210 0
Q ss_pred ----ccchhhhhCCCCCCCcEEEEEeCCCCceecCCCCC-CHHHHHHHHHHHhcC
Q 013976 213 ----GKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGEL-TLDKIKTFGEDFLEG 262 (432)
Q Consensus 213 ----~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~~-~~~~i~~fi~~~~~g 262 (432)
...+++.|++... |++++++.++...+ .|.. +.+.|.++++..++|
T Consensus 115 ~~~d~~~~~~~~~v~~~--P~~~lid~~G~i~~--~g~~~~~~~l~~~l~~l~~g 165 (165)
T 3ha9_A 115 MVMDDGSLVEKFNVRSI--DYIVIMDKSSNVLY--AGTTPSLGELESVIKSVQGG 165 (165)
T ss_dssp EEECCSHHHHHTTCCSS--SEEEEEETTCCEEE--EEESCCHHHHHHHHHHC---
T ss_pred EEeChHHHHHHhCCCCc--eEEEEEcCCCcEEE--eCCCCCHHHHHHHHHHHhcC
Confidence 0267888999887 99999977654444 6777 999999999987754
No 323
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.07 E-value=6.3e-06 Score=70.70 Aligned_cols=87 Identities=11% Similarity=0.101 Sum_probs=66.4
Q ss_pred CCcEEEEEe-CCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc---------------------------c---c
Q 013976 297 SKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE---------------------------H---H 345 (432)
Q Consensus 297 ~~~~lv~f~-~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~---------------------------~---~ 345 (432)
++.+||+|| ++||.+|....+.+.+++..|++. ++.++.|+++... . .
T Consensus 36 gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~-~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 114 (202)
T 1uul_A 36 GKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDI-GCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMK 114 (202)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHH
Confidence 579999999 999999999999999999999763 6889999886410 0 2
Q ss_pred cCCCC------CCceEEEE-eCCCcccCceeccC----CCCHHHHHHHHHhcC
Q 013976 346 RAKSD------GFPTILFF-PAGNKSFDPINVDV----DRTVVALYKFLKKNA 387 (432)
Q Consensus 346 ~~~i~------~~P~i~~~-~~g~~~~~~~~y~g----~~~~~~l~~fi~~~~ 387 (432)
.|++. .+|+++++ ++|..+. .+.| ..+.+.|.+.|+...
T Consensus 115 ~ygv~~~~~g~~~P~~~lid~~G~i~~---~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 115 SYGVLKEEDGVAYRGLFIIDPKQNLRQ---ITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEEE---EEEECTTBCCCHHHHHHHHHHHH
T ss_pred HcCCccCCCCceeeEEEEECCCCEEEE---EEeCCCCCCCCHHHHHHHHHHhh
Confidence 45777 89999999 5555432 2333 456788988888664
No 324
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.07 E-value=1.7e-05 Score=65.00 Aligned_cols=94 Identities=6% Similarity=0.054 Sum_probs=74.7
Q ss_pred CCCcceEEEEEeC-cchhh-hHHHHHHHHHhccCc-eEEEEEecCC-------------------------cccccc---
Q 013976 167 SPIKNQLLLFAVS-NDSEK-LLPVFEEAAKSFKGK-LIFVYVQMDN-------------------------EDVGKP--- 215 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~-~~~~~~~~a~~~~~~-i~f~~vd~~~-------------------------~~~~~~--- 215 (432)
.++++++.||++| +.|.. ..+.+.+++++|.++ +.|+.|+++- .+....
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQR 108 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCS
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccch
Confidence 4567788899999 99999 599999999999875 8888887620 000223
Q ss_pred ---hhhhhCCCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcC
Q 013976 216 ---VSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 262 (432)
Q Consensus 216 ---l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g 262 (432)
+.+.||+... |++++++.++...+.+.|..+.+.+.++|+..++.
T Consensus 109 ~~~~~~~~~v~~~--P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 156 (160)
T 3lor_A 109 IPSTMKKYRLEGT--PSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLSE 156 (160)
T ss_dssp SCHHHHHTTCCSS--SEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred hhhHHHhcccCcc--ceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHhc
Confidence 7889999887 99989977665666778889999999999998863
No 325
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.06 E-value=5.2e-06 Score=70.61 Aligned_cols=88 Identities=11% Similarity=0.114 Sum_probs=66.6
Q ss_pred CCCcEEEEEe-CCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc---------------------------c---
Q 013976 296 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE---------------------------H--- 344 (432)
Q Consensus 296 ~~~~~lv~f~-~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~---------------------------~--- 344 (432)
.++.+||+|| ++||.+|....+.+.+++..|++. ++.++.|+++... .
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 108 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKER-NVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIA 108 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHH
Confidence 4579999999 999999999999999999999752 6888888876310 0
Q ss_pred ccCCCC-----CCceEEEE-eCCCcccCceeccC----CCCHHHHHHHHHhcC
Q 013976 345 HRAKSD-----GFPTILFF-PAGNKSFDPINVDV----DRTVVALYKFLKKNA 387 (432)
Q Consensus 345 ~~~~i~-----~~P~i~~~-~~g~~~~~~~~y~g----~~~~~~l~~fi~~~~ 387 (432)
..|++. .+|+++++ ++|..+. .+.| ..+.+.+.+.|++..
T Consensus 109 ~~~gv~~~~g~~~P~~~liD~~G~i~~---~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 109 RSYDVLFNESVALRAFVLIDKQGVVQH---LLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp HHTTCEETTTEECCEEEEECTTSBEEE---EEEGGGSSGGGHHHHHHHHHHHH
T ss_pred HHhCCcCcCCceeeEEEEEcCCCEEEE---EEeCCCCCCCCHHHHHHHHHHHh
Confidence 246888 89999999 5665442 3333 346788888887664
No 326
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=98.06 E-value=2.4e-05 Score=63.00 Aligned_cols=90 Identities=9% Similarity=0.031 Sum_probs=70.4
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhc-cCc-eEEEEEecCCcc----------------------cccchhhhhC
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSF-KGK-LIFVYVQMDNED----------------------VGKPVSEYFG 221 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~-~~~-i~f~~vd~~~~~----------------------~~~~l~~~~~ 221 (432)
.++++++.||++| +.|+...+.+.++++++ .++ +.|+.++++... ....+++.||
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 4567788899999 89999999999999999 664 889988877521 0237789999
Q ss_pred CCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 222 ITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 222 i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
+... |++++++.++...+.+. +.+.+.++++.+++
T Consensus 112 v~~~--P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 112 ILTL--PTNILLSPTGKILARDI---QGEALTGKLKELLK 146 (148)
T ss_dssp CCSS--SEEEEECTTSBEEEESC---CHHHHHHHHHHHC-
T ss_pred CCCc--CEEEEECCCCeEEEecC---CHHHHHHHHHHHHc
Confidence 9987 99989876654444332 89999999998875
No 327
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.04 E-value=8.1e-06 Score=71.01 Aligned_cols=87 Identities=13% Similarity=0.137 Sum_probs=66.9
Q ss_pred CCcEEEEEe-CCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc---------------------------c---c
Q 013976 297 SKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE---------------------------H---H 345 (432)
Q Consensus 297 ~~~~lv~f~-~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~---------------------------~---~ 345 (432)
++++||+|| ++||..|....+.+.+++..|++. ++.++.|+++... . .
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~-~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~ 134 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDV-NCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISR 134 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHH
Confidence 589999999 999999999999999999999753 6888888876410 0 2
Q ss_pred cCCCC------CCceEEEE-eCCCcccCceeccC----CCCHHHHHHHHHhcC
Q 013976 346 RAKSD------GFPTILFF-PAGNKSFDPINVDV----DRTVVALYKFLKKNA 387 (432)
Q Consensus 346 ~~~i~------~~P~i~~~-~~g~~~~~~~~y~g----~~~~~~l~~fi~~~~ 387 (432)
.|++. .+|+++++ ++|..+. .+.| ..+.+.+++.|+...
T Consensus 135 ~ygv~~~~~g~~~P~~~liD~~G~I~~---~~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 135 DYGVLLEGPGLALRGLFIIDPNGVIKH---LSVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEE---EEEECTTCCCCHHHHHHHHHHHH
T ss_pred HhCCeecCCCcccceEEEECCCCEEEE---EEecCCCCCCCHHHHHHHHHHhh
Confidence 46787 89999999 5665432 2233 367789998888765
No 328
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.04 E-value=7.2e-06 Score=68.51 Aligned_cols=80 Identities=10% Similarity=0.083 Sum_probs=61.1
Q ss_pred CCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc---------------------------------
Q 013976 297 SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--------------------------------- 343 (432)
Q Consensus 297 ~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~--------------------------------- 343 (432)
.+.+|+.|+++||++|..+.|.+.++...+.+ +.+...+.....
T Consensus 22 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~---v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~~ 98 (175)
T 3gyk_A 22 GDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN---VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGKA 98 (175)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT---EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSCC
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHhCCC---EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCCC
Confidence 46789999999999999999999999888654 555555532100
Q ss_pred -------------------------------c-------ccCCCCCCceEEEEeCCCcccCceeccCCCCHHHHHHHHHh
Q 013976 344 -------------------------------H-------HRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKK 385 (432)
Q Consensus 344 -------------------------------~-------~~~~i~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~ 385 (432)
. ..++|.++|++++ +|. .+.|..+.+.|.++|.+
T Consensus 99 ~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i--~g~------~~~G~~~~~~l~~~i~~ 170 (175)
T 3gyk_A 99 NETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV--EDA------LVPGFVEQSQLQDAVDR 170 (175)
T ss_dssp SHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTE------EECSCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE--CCE------EeeCCCCHHHHHHHHHH
Confidence 0 2468999999987 452 56788899999999987
Q ss_pred cC
Q 013976 386 NA 387 (432)
Q Consensus 386 ~~ 387 (432)
..
T Consensus 171 ~l 172 (175)
T 3gyk_A 171 AR 172 (175)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 329
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.04 E-value=7.3e-06 Score=71.10 Aligned_cols=80 Identities=15% Similarity=0.243 Sum_probs=58.2
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCC----------------------------------
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT---------------------------------- 341 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~---------------------------------- 341 (432)
+.+.+++.||++||++|+.+.+.+.+++.. ++.+..+..-.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~-----~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~ 159 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL-----GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVA 159 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT-----TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC-----CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCC
Confidence 357899999999999999999999988652 34554433210
Q ss_pred -----ccc-------ccCCCCCCceEEEEeCCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 342 -----NEH-------HRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 342 -----~~~-------~~~~i~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
... ..++|.++|++ ++.+|. .+.|..+.+.|.++|.+..
T Consensus 160 ~~~~~~~v~~~~~l~~~~gV~gtPt~-v~~dG~------~~~G~~~~~~l~~~l~~~~ 210 (216)
T 1eej_A 160 PASCDVDIADHYALGVQLGVSGTPAV-VLSNGT------LVPGYQPPKEMKEFLDEHQ 210 (216)
T ss_dssp CCCCSCCHHHHHHHHHHHTCCSSSEE-ECTTSC------EEESCCCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCccCEE-EEcCCe------EecCCCCHHHHHHHHHHhh
Confidence 011 35699999999 455663 5678889999999988753
No 330
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.03 E-value=1.9e-05 Score=64.06 Aligned_cols=96 Identities=14% Similarity=0.117 Sum_probs=72.8
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCc-eEEEEEecCCcc-------------------cccchhhhhCCCCC
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNED-------------------VGKPVSEYFGITGE 225 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~-i~f~~vd~~~~~-------------------~~~~l~~~~~i~~~ 225 (432)
.++++++.||++| +.|....+.+.+++.++.++ +.|+.++++... ....+++.||+...
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 106 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKGM 106 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCCC
Confidence 4557788889999 99999999999999999875 889988887521 01256788999887
Q ss_pred CCcEEEEEeCCCCceecCCCC--CCHHHHHHHHHHHhcCCc
Q 013976 226 APKVLAYTGNDDAKKHILDGE--LTLDKIKTFGEDFLEGKL 264 (432)
Q Consensus 226 ~~P~i~i~~~~~~~~y~~~~~--~~~~~i~~fi~~~~~g~l 264 (432)
|++++++.++...+.+.|. .+.+.|.++|+..+.+.-
T Consensus 107 --P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~~~ 145 (152)
T 3gl3_A 107 --PTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGGNE 145 (152)
T ss_dssp --SEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC---
T ss_pred --CeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHcccc
Confidence 9988887665555556563 466899999999887543
No 331
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=98.03 E-value=9.7e-06 Score=66.01 Aligned_cols=92 Identities=10% Similarity=0.048 Sum_probs=73.6
Q ss_pred CcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCc------------------------ccccchhhhhCCC
Q 013976 169 IKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNE------------------------DVGKPVSEYFGIT 223 (432)
Q Consensus 169 ~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~------------------------~~~~~l~~~~~i~ 223 (432)
++.++.||++| +.|+...+.+.++++++ .+.|+.|+++.. .....+++.||+.
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~ 108 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVL 108 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBC
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCCC
Confidence 56788899999 99999999999999999 588888888210 0145778899998
Q ss_pred CCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcCCc
Q 013976 224 GEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKL 264 (432)
Q Consensus 224 ~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g~l 264 (432)
.. |++++++.++...+.+.|..+.+.|.++|++...+.-
T Consensus 109 ~~--P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~~ 147 (154)
T 3ia1_A 109 GQ--PWTFVVDREGKVVALFAGRAGREALLDALLLAGADLE 147 (154)
T ss_dssp SS--CEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCCC-
T ss_pred cc--cEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCccc
Confidence 77 9988887665556667888999999999999876543
No 332
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.02 E-value=2.3e-05 Score=69.13 Aligned_cols=52 Identities=8% Similarity=0.195 Sum_probs=38.4
Q ss_pred CcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc-----ccCCCCCCceEEE
Q 013976 298 KDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH-----HRAKSDGFPTILF 357 (432)
Q Consensus 298 ~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~-----~~~~i~~~P~i~~ 357 (432)
...+++|+.+||+.|+.+...+.+. ++.+-.+|++.+.. ..++..++|++++
T Consensus 169 ~~~i~ly~~~~Cp~C~~a~~~L~~~--------~i~~~~~~i~~~~~~~~l~~~~g~~~vP~~~~ 225 (241)
T 1nm3_A 169 QESISIFTKPGCPFCAKAKQLLHDK--------GLSFEEIILGHDATIVSVRAVSGRTTVPQVFI 225 (241)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHH--------TCCCEEEETTTTCCHHHHHHHTCCSSSCEEEE
T ss_pred cceEEEEECCCChHHHHHHHHHHHc--------CCceEEEECCCchHHHHHHHHhCCCCcCEEEE
Confidence 3457889999999999998888875 35566677776543 2467789999753
No 333
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.01 E-value=1.5e-05 Score=69.37 Aligned_cols=87 Identities=13% Similarity=0.123 Sum_probs=65.2
Q ss_pred CCCcEEEEEeC-CCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc------------------------------
Q 013976 296 ESKDVLLEIYA-PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH------------------------------ 344 (432)
Q Consensus 296 ~~~~~lv~f~~-~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~------------------------------ 344 (432)
.++++||.||+ +||.+|....|.+.++...|++. ++.++.|+++....
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~-~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 146 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSR-NCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEIS 146 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHH
Confidence 46799999996 99999999999999999999863 68888888874210
Q ss_pred ccCCCC------CCceEEEE-eCCCcccCceeccC----CCCHHHHHHHHHhc
Q 013976 345 HRAKSD------GFPTILFF-PAGNKSFDPINVDV----DRTVVALYKFLKKN 386 (432)
Q Consensus 345 ~~~~i~------~~P~i~~~-~~g~~~~~~~~y~g----~~~~~~l~~fi~~~ 386 (432)
..|++. .+|+.+++ ++|..+. .+.| ....+.+++.|+..
T Consensus 147 ~~ygv~~~~~g~~~P~~~lID~~G~I~~---~~~g~~~~~~~~~~il~~l~~l 196 (222)
T 3ztl_A 147 KAYGVFDEEDGNAFRGLFIIDPNGILRQ---ITINDKPVGRSVDETLRLLDAF 196 (222)
T ss_dssp HHTTCBCTTTSSBCEEEEEECTTSEEEE---EEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCeecCCCCccceEEEECCCCeEEE---EEecCCCCCCCHHHHHHHHHHh
Confidence 246777 89999999 5565432 3333 34578888888754
No 334
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.00 E-value=2.2e-05 Score=64.97 Aligned_cols=86 Identities=13% Similarity=0.139 Sum_probs=62.0
Q ss_pred CCCcEEEEEeCCC-ChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc----------------------c---ccCCC
Q 013976 296 ESKDVLLEIYAPW-CGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE----------------------H---HRAKS 349 (432)
Q Consensus 296 ~~~~~lv~f~~~~-c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~----------------------~---~~~~i 349 (432)
.+++++|.||++| |++|....|.+.+++..+ . ++.++.|+.+... . ..+++
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~--~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v 119 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-G--DVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGV 119 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-S--SCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTC
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-C--CCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCC
Confidence 3679999999999 999999999999999999 3 6888888876411 0 23455
Q ss_pred CC------CceEEEE-eCCCcccCceeccC-----CCCHHHHHHHHHhcC
Q 013976 350 DG------FPTILFF-PAGNKSFDPINVDV-----DRTVVALYKFLKKNA 387 (432)
Q Consensus 350 ~~------~P~i~~~-~~g~~~~~~~~y~g-----~~~~~~l~~fi~~~~ 387 (432)
.. .|+.+++ ++|..+. .+.| ..+.+.+++.|++.+
T Consensus 120 ~~~~~g~~~p~~~lid~~G~i~~---~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 120 YIKELRLLARSVFVLDENGKVVY---AEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp BBTTTCSBCCEEEEECTTSCEEE---EEECSBTTSCCCSHHHHHHHHHHH
T ss_pred ccccCCceeeEEEEEcCCCcEEE---EEecCCcCCCCCHHHHHHHHHHhh
Confidence 54 4988888 5565543 3332 335688888887653
No 335
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=97.99 E-value=1.1e-05 Score=69.76 Aligned_cols=88 Identities=11% Similarity=0.096 Sum_probs=65.5
Q ss_pred CCCcEEEEEe-CCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc---------------------------c---
Q 013976 296 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE---------------------------H--- 344 (432)
Q Consensus 296 ~~~~~lv~f~-~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~---------------------------~--- 344 (432)
.++++||+|| ++||..|....+.+.+++..|++. ++.++.|+++... .
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~ 129 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHER-NVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSIS 129 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHH
Confidence 4578999999 999999999999999999999742 6888888876410 0
Q ss_pred ccCCCC-----CCceEEEE-eCCCcccCceeccC----CCCHHHHHHHHHhcC
Q 013976 345 HRAKSD-----GFPTILFF-PAGNKSFDPINVDV----DRTVVALYKFLKKNA 387 (432)
Q Consensus 345 ~~~~i~-----~~P~i~~~-~~g~~~~~~~~y~g----~~~~~~l~~fi~~~~ 387 (432)
..|++. .+|+++++ ++|..+. .+.| .++.+.|++.|+...
T Consensus 130 ~~ygv~~~~g~~~p~~~lID~~G~i~~---~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 130 KDYNVLFDDSVSLRAFVLIDMNGIVQH---LLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp HHTTCEETTTEECEEEEEECTTSBEEE---EEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHhCCccccCCcccEEEEECCCCEEEE---EEecCCCCCCCHHHHHHHHHHHH
Confidence 246777 89999998 5555432 2333 356888988888654
No 336
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=97.95 E-value=2.9e-05 Score=63.37 Aligned_cols=94 Identities=11% Similarity=0.049 Sum_probs=74.1
Q ss_pred CCCcceEEEEEeC-cchhhh-HHHHHHHHHhccC-ceEEEEEecCCc-------------------------cccc----
Q 013976 167 SPIKNQLLLFAVS-NDSEKL-LPVFEEAAKSFKG-KLIFVYVQMDNE-------------------------DVGK---- 214 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~-~~~~~~~a~~~~~-~i~f~~vd~~~~-------------------------~~~~---- 214 (432)
.++++++.||++| +.|... .+.+.+++++|.+ .+.|+.++++.. +...
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 106 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAM 106 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhh
Confidence 3567788899999 899995 9999999999984 588888875310 0011
Q ss_pred -chhhhhCCCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcC
Q 013976 215 -PVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 262 (432)
Q Consensus 215 -~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g 262 (432)
.+++.||+... |++++++.++...+.+.|..+.+.+.++|+..++.
T Consensus 107 ~~~~~~~~v~~~--P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 153 (158)
T 3eyt_A 107 PRTMAAYQMRGT--PSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLGE 153 (158)
T ss_dssp CHHHHHTTCCSS--SEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHTS
T ss_pred HHHHHHcCCCCC--CEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 47889999887 99988877665566777889999999999998864
No 337
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=97.94 E-value=3.7e-05 Score=62.46 Aligned_cols=96 Identities=14% Similarity=0.146 Sum_probs=71.5
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccC-ceEEEEEecCCcc--------------------cccchhhhhCCCC
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNED--------------------VGKPVSEYFGITG 224 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~-~i~f~~vd~~~~~--------------------~~~~l~~~~~i~~ 224 (432)
.+++.++.||++| +.|....+.+.+++.++.+ .+.|+.++++... ....+++.||+..
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTG 106 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCC
Confidence 4567788899999 9999999999999999987 6888888887630 0134788899988
Q ss_pred CCCcEEEEEeCCCCceecCCCC--CCHHHHHHHHHHHhcCCc
Q 013976 225 EAPKVLAYTGNDDAKKHILDGE--LTLDKIKTFGEDFLEGKL 264 (432)
Q Consensus 225 ~~~P~i~i~~~~~~~~y~~~~~--~~~~~i~~fi~~~~~g~l 264 (432)
. |++++++.++...+.+.|. .+.+.+.++|+.+..+.-
T Consensus 107 ~--P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~~~~ 146 (154)
T 3kcm_A 107 V--PETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELSKAR 146 (154)
T ss_dssp B--CEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC-----
T ss_pred C--CeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHHHHhh
Confidence 7 9888887665555556664 477899999999766443
No 338
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=97.94 E-value=4.4e-05 Score=61.94 Aligned_cols=93 Identities=18% Similarity=0.132 Sum_probs=72.0
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCc-eEEEEEecCCccc----------------------ccchhhhhCC
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNEDV----------------------GKPVSEYFGI 222 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~-i~f~~vd~~~~~~----------------------~~~l~~~~~i 222 (432)
.++++++.||++| +.|....+.+.+++.++.++ +.|+.++++.... ...+++.||+
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 107 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCI 107 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCC
Confidence 4567788899999 99999999999999999875 9999998875210 2467889999
Q ss_pred CCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcCCc
Q 013976 223 TGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKL 264 (432)
Q Consensus 223 ~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g~l 264 (432)
... |++++++.++...+.+ .+.+.+.++++.++.+..
T Consensus 108 ~~~--P~~~lid~~G~i~~~~---~~~~~l~~~l~~l~~~~~ 144 (152)
T 2lrn_A 108 VGF--PHIILVDPEGKIVAKE---LRGDDLYNTVEKFVNGAK 144 (152)
T ss_dssp CSS--CEEEEECTTSEEEEEC---CCTTHHHHHHHHHHTSSS
T ss_pred CcC--CeEEEECCCCeEEEee---CCHHHHHHHHHHHHhhcc
Confidence 887 9998887655444443 456789999999887544
No 339
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=97.94 E-value=8.9e-06 Score=62.27 Aligned_cols=86 Identities=12% Similarity=-0.032 Sum_probs=66.5
Q ss_pred CcceEEEEEeC-cchhhhHHHHHHHHHhccCc-----eEEEEEecCCcccccchhhhhCCCCCCCcEEEEEeCCCCceec
Q 013976 169 IKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-----LIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHI 242 (432)
Q Consensus 169 ~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~-----i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~ 242 (432)
...+|+||++| +.|+.+.+ .++..+... +.+..+|.+... ...+...++|.+. |+++++.++ .....
T Consensus 19 ~~~LV~F~A~wC~~Ck~~~~---~i~~~~~~~a~~~~~~l~~vdv~~~~-~~~la~~~~V~g~--PT~i~f~~G-~ev~R 91 (116)
T 3dml_A 19 ELRLLMFEQPGCLYCARWDA---EIAPQYPLTDEGRAAPVQRLQMRDPL-PPGLELARPVTFT--PTFVLMAGD-VESGR 91 (116)
T ss_dssp CEEEEEEECTTCHHHHHHHH---HTTTTGGGSHHHHHSCEEEEETTSCC-CTTCBCSSCCCSS--SEEEEEETT-EEEEE
T ss_pred CCEEEEEECCCCHHHHHHHH---HHHhhHHHhhhcccceEEEEECCCCC-chhHHHHCCCCCC--CEEEEEECC-EEEee
Confidence 35688999999 99999975 344455443 778888988753 4567788899877 999999844 34556
Q ss_pred CCCCCCHHHHHHHHHHHhc
Q 013976 243 LDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 243 ~~~~~~~~~i~~fi~~~~~ 261 (432)
..|.+..+.+.+|++..+.
T Consensus 92 i~G~~~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 92 LEGYPGEDFFWPMLARLIG 110 (116)
T ss_dssp EECCCCHHHHHHHHHHHHH
T ss_pred ecCCCCHHHHHHHHHHHHh
Confidence 7899999999999998764
No 340
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=97.93 E-value=1.3e-05 Score=69.25 Aligned_cols=79 Identities=15% Similarity=0.196 Sum_probs=57.8
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCC-----------------------------------
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT----------------------------------- 340 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~----------------------------------- 340 (432)
+.+.+++.|+++||++|+.+.+.+.++... ++.+..+..-
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~-----~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~ 159 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL-----GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPK 159 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT-----TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCS
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC-----CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCC
Confidence 357899999999999999999999987542 2444433221
Q ss_pred ----Cccc-------ccCCCCCCceEEEEeCCCcccCceeccCCCCHHHHHHHHHhc
Q 013976 341 ----TNEH-------HRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKN 386 (432)
Q Consensus 341 ----~~~~-------~~~~i~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~ 386 (432)
.... ..++|+++|++++ .+|. .+.|..+.+.|.++|.+.
T Consensus 160 ~~~~~~~v~~~~~l~~~~gV~gTPt~vi-~nG~------~~~G~~~~~~l~~~l~~~ 209 (211)
T 1t3b_A 160 EVKTPNIVKKHYELGIQFGVRGTPSIVT-STGE------LIGGYLKPADLLRALEET 209 (211)
T ss_dssp SCCCSSHHHHHHHHHHHHTCCSSCEEEC-TTSC------CCCSCCCHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHHcCCCcCCEEEE-eCCE------EecCCCCHHHHHHHHHhc
Confidence 0000 3579999999998 6664 457888999999999864
No 341
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=97.92 E-value=1.1e-05 Score=69.03 Aligned_cols=46 Identities=9% Similarity=-0.041 Sum_probs=37.7
Q ss_pred CCCcEEEEEeCCCChh-hhhhHHHHHHHHHHhcC--CCCEEEEEEeCCC
Q 013976 296 ESKDVLLEIYAPWCGH-CQAFEPTYNKLAKHLRG--VDSIVIAKMDGTT 341 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~-c~~~~~~~~~la~~~~~--~~~~~~~~id~~~ 341 (432)
.++++||.||++||++ |....+.+.++...+.. ..++.++.|+++.
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~ 88 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDP 88 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCT
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCC
Confidence 4689999999999998 99999999998887763 1267888887763
No 342
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=97.92 E-value=2.2e-05 Score=64.62 Aligned_cols=87 Identities=11% Similarity=0.058 Sum_probs=62.8
Q ss_pred CCcEEEEEeC-CCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc-----------------------ccCCCCC-
Q 013976 297 SKDVLLEIYA-PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH-----------------------HRAKSDG- 351 (432)
Q Consensus 297 ~~~~lv~f~~-~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~-----------------------~~~~i~~- 351 (432)
+++++|+||+ +||++|....+.+.++...|++. ++.++.|.++.... ..|++..
T Consensus 35 gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~-~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 113 (163)
T 3gkn_A 35 GHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKA-GAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKE 113 (163)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEE
T ss_pred CCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCccc
Confidence 5689999998 99999999999999999999863 57777777763111 2345555
Q ss_pred -----------CceEEEE-eCCCcccCceeccC---CCCHHHHHHHHHhcC
Q 013976 352 -----------FPTILFF-PAGNKSFDPINVDV---DRTVVALYKFLKKNA 387 (432)
Q Consensus 352 -----------~P~i~~~-~~g~~~~~~~~y~g---~~~~~~l~~fi~~~~ 387 (432)
.|+.+++ ++|..+. .+.+ ....+.+++.|++..
T Consensus 114 ~~~~~~~~~~~~p~~~lid~~G~i~~---~~~~~~~~~~~~~il~~l~~l~ 161 (163)
T 3gkn_A 114 KNMYGKQVLGIERSTFLLSPEGQVVQ---AWRKVKVAGHADAVLAALKAHA 161 (163)
T ss_dssp EEETTEEEEEECCEEEEECTTSCEEE---EECSCCSTTHHHHHHHHHHHHC
T ss_pred cccccccccCcceEEEEECCCCeEEE---EEcCCCcccCHHHHHHHHHHHh
Confidence 8999999 5565432 3333 345578888887654
No 343
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=97.91 E-value=3.2e-05 Score=62.97 Aligned_cols=91 Identities=16% Similarity=0.176 Sum_probs=70.8
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCc--------------------ccccchhhhhCCCCC
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNE--------------------DVGKPVSEYFGITGE 225 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~--------------------~~~~~l~~~~~i~~~ 225 (432)
.+++.++.||++| +.|+...+.+.+++.+ +++.|+.++++.. +-...+++.||+...
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 118 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGV 118 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC--TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCSS
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCcc
Confidence 3567788899999 8999999999999887 5688888876421 113467788999887
Q ss_pred CCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 226 APKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 226 ~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
|++++++.++...+.+.|..+.+.+.++++..+.
T Consensus 119 --P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l~ 152 (156)
T 1kng_A 119 --PETFVVGREGTIVYKLVGPITPDNLRSVLLPQME 152 (156)
T ss_dssp --CEEEEECTTSBEEEEEESCCCHHHHHHTHHHHHH
T ss_pred --CeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHHH
Confidence 9777776665555667888999999999998764
No 344
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=97.87 E-value=6.5e-05 Score=60.84 Aligned_cols=93 Identities=14% Similarity=0.096 Sum_probs=71.3
Q ss_pred cCCCcceEEEEEeC-cchhhhHHHH---HHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEEEEeCCCC-ce
Q 013976 166 ESPIKNQLLLFAVS-NDSEKLLPVF---EEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDA-KK 240 (432)
Q Consensus 166 ~~~~~~~i~~~~~~-~~~~~~~~~~---~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~~~~~-~~ 240 (432)
..+++++|.|+++| ..|+.+.... .+|+..++.++.++.+|.+..+ ...+++.|++.+. |++++++...+ ..
T Consensus 40 ~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~-~~~l~~~y~v~~~--P~~~fld~~~G~~l 116 (153)
T 2dlx_A 40 MQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEE-GQRYIQFYKLGDF--PYVSILDPRTGQKL 116 (153)
T ss_dssp HHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHH-HHHHHHHHTCCSS--SEEEEECTTTCCCC
T ss_pred HcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHh-HHHHHHHcCCCCC--CEEEEEeCCCCcEe
Confidence 34667788899999 9999987554 4566666667999999997654 6678999999887 99999987633 33
Q ss_pred ecCCCCCCHHHHHHHHHHHhcC
Q 013976 241 HILDGELTLDKIKTFGEDFLEG 262 (432)
Q Consensus 241 y~~~~~~~~~~i~~fi~~~~~g 262 (432)
....| ++.+.+.++++.++..
T Consensus 117 ~~~~g-~~~~~fl~~L~~~l~~ 137 (153)
T 2dlx_A 117 VEWHQ-LDVSSFLDQVTGFLGE 137 (153)
T ss_dssp EEESS-CCHHHHHHHHHHHHHH
T ss_pred eecCC-CCHHHHHHHHHHHHHh
Confidence 33445 8999999999998753
No 345
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=97.85 E-value=7.3e-05 Score=62.75 Aligned_cols=91 Identities=4% Similarity=-0.009 Sum_probs=69.5
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCc-e------EEEEEecCCcccccchhhhh------------------
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-L------IFVYVQMDNEDVGKPVSEYF------------------ 220 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~-i------~f~~vd~~~~~~~~~l~~~~------------------ 220 (432)
.+++++|.||++| +.|....+.+.+++++|.++ + .|+.|+++.. .+..++.|
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~--~~~~~~~~~~~~~~~~~~~~d~~~~~ 135 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDY--SRDIAQDFVTDNGLDYPSIYDPPFMT 135 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCC--CHHHHHHHHHHTTCCSCEEECTTCGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCC--CHHHHHHHHHHcCCCccEEECCcchH
Confidence 4567788899999 88999999999999999865 7 9999998761 11223333
Q ss_pred -------CCCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 221 -------GITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 221 -------~i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
++... |++++++.+....+.+.|..+.+.|.++++.++.
T Consensus 136 ~~~~~~~~v~~~--P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 136 AASLGGVPASVI--PTTIVLDKQHRPAAVFLREVTSKDVLDVALPLVD 181 (183)
T ss_dssp GGGTTTCCTTCC--SEEEEECTTSCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred HHHhccCCCCCC--CeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 34444 9888887766666777888999999999999875
No 346
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=97.82 E-value=6.8e-05 Score=63.69 Aligned_cols=93 Identities=13% Similarity=0.109 Sum_probs=73.5
Q ss_pred cceEEEEEeC-cchhhhHHHHHHHHHhccCc-eEEEEEecCCc--------------------------ccccchhhhhC
Q 013976 170 KNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNE--------------------------DVGKPVSEYFG 221 (432)
Q Consensus 170 ~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~-i~f~~vd~~~~--------------------------~~~~~l~~~~~ 221 (432)
++++.||++| +.|....+.+.+++.+|.++ +.|+.++++.. +....+++.|+
T Consensus 48 ~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 127 (196)
T 2ywi_A 48 ATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAKAYD 127 (196)
T ss_dssp EEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHHHT
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHHHhC
Confidence 3778888999 89999999999999999864 89999987421 11346788999
Q ss_pred CCCCCCcEEEEEeCCCCceec---------CCCCCCHHHHHHHHHHHhcCCc
Q 013976 222 ITGEAPKVLAYTGNDDAKKHI---------LDGELTLDKIKTFGEDFLEGKL 264 (432)
Q Consensus 222 i~~~~~P~i~i~~~~~~~~y~---------~~~~~~~~~i~~fi~~~~~g~l 264 (432)
+... |++++++.++...+. +.|..+.+.|.+.|+.++.++-
T Consensus 128 v~~~--P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~~~ 177 (196)
T 2ywi_A 128 AACT--PDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEGRP 177 (196)
T ss_dssp CCEE--SEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHTCC
T ss_pred CCCC--CeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHcCCC
Confidence 9877 999888766544554 4577899999999999987643
No 347
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=97.82 E-value=9.2e-05 Score=63.88 Aligned_cols=43 Identities=23% Similarity=0.383 Sum_probs=37.5
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCC
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 340 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~ 340 (432)
.++.+||.|||+||++|. ..|.|.++...|++. ++.+.-|+|+
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~-g~~Vlgvs~d 97 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPY-GLVVLGFPCN 97 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGG-TEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccC-CeEEEEEEcc
Confidence 468999999999999999 788999999999864 6888888865
No 348
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.81 E-value=4.7e-06 Score=63.16 Aligned_cols=78 Identities=13% Similarity=0.118 Sum_probs=49.3
Q ss_pred EEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc--------c-ccCCCCCCceEEEEeCCCcccCceec
Q 013976 300 VLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--------H-HRAKSDGFPTILFFPAGNKSFDPINV 370 (432)
Q Consensus 300 ~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~--------~-~~~~i~~~P~i~~~~~g~~~~~~~~y 370 (432)
.+++|+++||++|+.+.+.|.+++..+. . +..+|++.++ . ..+++.++|++ |.+|..+. .+
T Consensus 13 ~v~~f~~~~C~~C~~~~~~L~~~~~~~~---~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i--~~~g~~i~---g~ 82 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKTQELLSQLPFKEG---L--LEFVDITATSDTNEIQDYLQQLTGARTVPRV--FIGKECIG---GC 82 (105)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHSCBCTT---S--EEEEEGGGSTTHHHHHHHHHHHHSCCCSCEE--EETTEEEE---SH
T ss_pred CEEEEEcCCCHhHHHHHHHHHHcCCCCC---c--cEEEEccCCCCHHHHHHHHHHHhCCCCcCeE--EECCEEEe---cc
Confidence 4778999999999999999988743321 2 4556666552 1 35689999997 44665432 22
Q ss_pred c---CCCCHHHHHHHHHhcC
Q 013976 371 D---VDRTVVALYKFLKKNA 387 (432)
Q Consensus 371 ~---g~~~~~~l~~fi~~~~ 387 (432)
. +......|.++|++..
T Consensus 83 ~~~~~~~~~g~L~~~l~~~g 102 (105)
T 1kte_A 83 TDLESMHKRGELLTRLQQVG 102 (105)
T ss_dssp HHHHHHHHHTHHHHHHHHHT
T ss_pred HHHHHHHHCCcHHHHHHHcC
Confidence 1 1122456666666543
No 349
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=97.80 E-value=7.1e-05 Score=62.42 Aligned_cols=85 Identities=15% Similarity=0.140 Sum_probs=59.2
Q ss_pred CCCcEEEEEeCCC-ChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc-----------------------c-ccCCCC
Q 013976 296 ESKDVLLEIYAPW-CGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-----------------------H-HRAKSD 350 (432)
Q Consensus 296 ~~~~~lv~f~~~~-c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~-----------------------~-~~~~i~ 350 (432)
.++++||.||++| |++|....|.+.++... . ++.++.|+.+... . ..|++.
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~--~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 118 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA--S--GATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVT 118 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH--T--TCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTCB
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh--c--CCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCc
Confidence 3578999999998 99999999999999988 3 5888888876210 1 246666
Q ss_pred CC---------ceEEEE-eCCCcccCceecc--C---CCCHHHHHHHHHhcC
Q 013976 351 GF---------PTILFF-PAGNKSFDPINVD--V---DRTVVALYKFLKKNA 387 (432)
Q Consensus 351 ~~---------P~i~~~-~~g~~~~~~~~y~--g---~~~~~~l~~fi~~~~ 387 (432)
.. |+.+++ ++|..+. .+. + ....+.+++.+.+-+
T Consensus 119 ~~~~~~~g~~~p~~~lid~~G~I~~---~~~g~~~~~~~~~~~~l~~l~~~~ 167 (175)
T 1xvq_A 119 IADGPMAGLLARAIVVIGADGNVAY---TELVPEIAQEPNYEAALAALGATS 167 (175)
T ss_dssp BCSSTTTTSBCSEEEEECTTSBEEE---EEECSBTTCCCCHHHHHHHHHHTC
T ss_pred ccccccCCcccceEEEECCCCeEEE---EEECCCcCCCCCHHHHHHHHHhhc
Confidence 65 888888 5565542 332 1 335677777666544
No 350
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.78 E-value=2.7e-06 Score=65.61 Aligned_cols=80 Identities=14% Similarity=0.089 Sum_probs=50.8
Q ss_pred CcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc--------c-ccCCCCCCceEEEEeCCCcccCce
Q 013976 298 KDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--------H-HRAKSDGFPTILFFPAGNKSFDPI 368 (432)
Q Consensus 298 ~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~--------~-~~~~i~~~P~i~~~~~g~~~~~~~ 368 (432)
...+++|+++||++|+.+.+.|.+++... +. +..+|++.++ . ..+++.++|++++ +|+.+.
T Consensus 18 ~~~vv~f~~~~Cp~C~~~~~~L~~~~~~~---~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i--~g~~ig--- 87 (114)
T 2hze_A 18 NNKVTIFVKYTCPFCRNALDILNKFSFKR---GA--YEIVDIKEFKPENELRDYFEQITGGKTVPRIFF--GKTSIG--- 87 (114)
T ss_dssp TTCEEEEECTTCHHHHHHHHHHTTSCBCT---TS--EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEE--TTEEEE---
T ss_pred cCCEEEEEeCCChhHHHHHHHHHHcCCCc---Cc--eEEEEccCCCChHHHHHHHHHHhCCCCcCEEEE--CCEEEe---
Confidence 44688899999999999998887653211 12 7778887764 1 3578999998743 665432
Q ss_pred eccC---CCCHHHHHHHHHhcC
Q 013976 369 NVDV---DRTVVALYKFLKKNA 387 (432)
Q Consensus 369 ~y~g---~~~~~~l~~fi~~~~ 387 (432)
.+.+ ..+...|.++|+...
T Consensus 88 g~~~~~~~~~~~~L~~~L~~~g 109 (114)
T 2hze_A 88 GYSDLLEIDNMDALGDILSSIG 109 (114)
T ss_dssp SHHHHHHHHHTTCHHHHHHHTT
T ss_pred CcHHHHHHHHCChHHHHHHHcC
Confidence 2221 112345667776544
No 351
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=97.77 E-value=4.3e-05 Score=63.11 Aligned_cols=91 Identities=10% Similarity=0.029 Sum_probs=69.3
Q ss_pred cCCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCc--------------------ccccchhhhhCCCC
Q 013976 166 ESPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNE--------------------DVGKPVSEYFGITG 224 (432)
Q Consensus 166 ~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~--------------------~~~~~l~~~~~i~~ 224 (432)
..+++.++.||++| +.|....+.+.+++++ .+.|+.++++.. +....+++.||+..
T Consensus 49 ~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 125 (168)
T 2b1k_A 49 TQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYG 125 (168)
T ss_dssp CCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTCCS
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHC---CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCccc
Confidence 35667788899999 8999999999999987 477777774321 11446788999988
Q ss_pred CCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 225 EAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 225 ~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
. |+.++++.++...+.+.|..+.+.+.++++..+.
T Consensus 126 ~--P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 160 (168)
T 2b1k_A 126 A--PETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLWE 160 (168)
T ss_dssp S--SEEEEECTTSBEEEEEESCCCHHHHHHTTHHHHH
T ss_pred c--CEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 7 9777776655555667788999999999988764
No 352
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=97.75 E-value=0.00014 Score=58.52 Aligned_cols=111 Identities=11% Similarity=0.088 Sum_probs=79.6
Q ss_pred CceEEEecccchhhhhcCCCcEEE-EEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCC--Cccc--ccCCCCC--
Q 013976 279 GDVKIVVGNNFDEIVLDESKDVLL-EIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT--TNEH--HRAKSDG-- 351 (432)
Q Consensus 279 ~~v~~l~~~~~~~~~~~~~~~~lv-~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~--~~~~--~~~~i~~-- 351 (432)
+.|..++.++...+. +..-++.+ +|....-..-..+.+.+.++|+.+++ ++.|+.+|.+ .+.. ..++++.
T Consensus 14 PLV~e~t~en~~~~~-~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkg--ki~Fv~vd~~~~~~~~~l~~fGl~~~~ 90 (147)
T 3bj5_A 14 PLVIEFTEQTAPKIF-GGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKG--KILFAFIDSDHTDNQRILEFFGLKKEE 90 (147)
T ss_dssp -CEEECCTTTHHHHH-SSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTT--TCEEEEECTTCGGGHHHHHHTTCCGGG
T ss_pred CeeEEeccccHHHHh-cCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCC--ceEEEEEecchHhHHHHHHHcCCCccc
Confidence 458899999988865 44444444 45443334456788999999999998 7999999984 3322 5688885
Q ss_pred CceEEEEeC-CCcccCceecc-CCCCHHHHHHHHHhcCCCCCccc
Q 013976 352 FPTILFFPA-GNKSFDPINVD-VDRTVVALYKFLKKNASIPFKIQ 394 (432)
Q Consensus 352 ~P~i~~~~~-g~~~~~~~~y~-g~~~~~~l~~fi~~~~~~~~~~~ 394 (432)
+|+++++.. +... +. .+. +..+.+.|.+|+++....+....
T Consensus 91 ~P~v~i~~~~~~~~-Ky-~~~~~~~t~~~i~~Fv~d~l~GkL~p~ 133 (147)
T 3bj5_A 91 CPAVRLITLEEEMT-KY-KPESEELTAERITEFCHRFLEGKIKPH 133 (147)
T ss_dssp CSEEEEEECSSSCE-EE-CCSCCCCCHHHHHHHHHHHHTTCSCEE
T ss_pred CCEEEEEecccccc-cC-CCCcccCCHHHHHHHHHHHHcCCcccc
Confidence 999999975 3322 21 333 78899999999999998777543
No 353
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=97.75 E-value=0.00018 Score=58.05 Aligned_cols=90 Identities=14% Similarity=0.139 Sum_probs=69.7
Q ss_pred CCCcceEEEEEeC-cc--hhhhHHHHHHHHHhc-cCc-eEEEEEecCCcc----------------------cccchhhh
Q 013976 167 SPIKNQLLLFAVS-ND--SEKLLPVFEEAAKSF-KGK-LIFVYVQMDNED----------------------VGKPVSEY 219 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~--~~~~~~~~~~~a~~~-~~~-i~f~~vd~~~~~----------------------~~~~l~~~ 219 (432)
.++++++.||++| ++ |....+.+.+++++| .++ +.|+.|+.+... ....+.+.
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 4567788899999 89 999999999999999 654 888888877531 01367889
Q ss_pred hCCCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 220 FGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 220 ~~i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
||+... |++++++.++...+.+ .+.+.+.+.++.++.
T Consensus 112 ~~v~~~--P~~~lid~~G~i~~~~---~~~~~l~~~l~~ll~ 148 (150)
T 3fw2_A 112 YSIYKI--PANILLSSDGKILAKN---LRGEELKKKIENIVE 148 (150)
T ss_dssp TTCCSS--SEEEEECTTSBEEEES---CCHHHHHHHHHHHHH
T ss_pred cCCCcc--CeEEEECCCCEEEEcc---CCHHHHHHHHHHHHh
Confidence 999877 9999997665444443 388889999888764
No 354
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=97.74 E-value=0.00011 Score=61.88 Aligned_cols=96 Identities=10% Similarity=0.102 Sum_probs=72.6
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCc--------------------------ccccchhhh
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNE--------------------------DVGKPVSEY 219 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~--------------------------~~~~~l~~~ 219 (432)
.++.+++.|+++| +.|....+.+.+++++|.+++.|+.++++.. +....+.+.
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 111 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKA 111 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHH
Confidence 3467788899999 8899999999999999998788888887421 013467888
Q ss_pred hCCCCCCCcEEEEEeCCCCceec--------CCCCCCHHHHHHHHHHHhcCCc
Q 013976 220 FGITGEAPKVLAYTGNDDAKKHI--------LDGELTLDKIKTFGEDFLEGKL 264 (432)
Q Consensus 220 ~~i~~~~~P~i~i~~~~~~~~y~--------~~~~~~~~~i~~fi~~~~~g~l 264 (432)
||+... |++++++.+....+. +.|..+.+.|.+.|+..+.++-
T Consensus 112 ~~v~~~--P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~~~ 162 (188)
T 2cvb_A 112 YRALRT--PEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRGEE 162 (188)
T ss_dssp TTCCEE--SEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTTCC
T ss_pred cCCCCC--CeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHcCCC
Confidence 999877 999888765543343 1233478899999999987654
No 355
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.69 E-value=6.2e-05 Score=55.14 Aligned_cols=75 Identities=20% Similarity=0.349 Sum_probs=56.0
Q ss_pred EEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--c---c--CCCCCCceEEEEeCCCcccCceeccC
Q 013976 300 VLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--H---R--AKSDGFPTILFFPAGNKSFDPINVDV 372 (432)
Q Consensus 300 ~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~---~--~~i~~~P~i~~~~~g~~~~~~~~y~g 372 (432)
-++.|.++||++|......|.+. ++.|..+|++.++. . + .+..++|+|++ .+|.. . +
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~~--------gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~i-~Dg~~------l-~ 68 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTAN--------RIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVKF-ADGST------L-T 68 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHT--------TCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEEE-TTSCE------E-E
T ss_pred cEEEEcCCCCHhHHHHHHHHHhc--------CCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEEE-eCCEE------E-e
Confidence 47889999999999998877764 57788899988765 1 1 25778998754 44532 2 2
Q ss_pred CCCHHHHHHHHHhcCCCC
Q 013976 373 DRTVVALYKFLKKNASIP 390 (432)
Q Consensus 373 ~~~~~~l~~fi~~~~~~~ 390 (432)
+.+.+.|.++|.+.++..
T Consensus 69 ~~~~~el~~~L~el~gL~ 86 (92)
T 2lqo_A 69 NPSADEVKAKLVKIAGLE 86 (92)
T ss_dssp SCCHHHHHHHHHHHHCCS
T ss_pred CCCHHHHHHHHHHhcCCc
Confidence 478899999999887654
No 356
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=97.68 E-value=4.4e-05 Score=63.21 Aligned_cols=90 Identities=11% Similarity=0.096 Sum_probs=66.2
Q ss_pred HHHhcCCCceeec--CCCchhhhccCCCcceEEEEEeC-cchhhhHHH-H--HHHHHhccCceEEEEEecCCcccccchh
Q 013976 144 FVFSNKLPLVTIF--TRENAPSVFESPIKNQLLLFAVS-NDSEKLLPV-F--EEAAKSFKGKLIFVYVQMDNEDVGKPVS 217 (432)
Q Consensus 144 fi~~~~~p~v~~l--~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~-~--~~~a~~~~~~i~f~~vd~~~~~~~~~l~ 217 (432)
++..+....|.-. +.+.+......+++++|.|+++| +.|+.+.+. | .+++..+.+++.++.||.++ .+++.
T Consensus 13 yl~~ha~~~v~W~~~~~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de---~~~l~ 89 (173)
T 3ira_A 13 YLLQHAYNPVDWYPWGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREE---RPDID 89 (173)
T ss_dssp HHHTTTTSSSCCBCSSHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTT---CHHHH
T ss_pred HHHhccCCCCCCCCcCHHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcc---cCcHH
Confidence 4455554444332 33556666677888899999999 999999882 3 57888887789999999987 55777
Q ss_pred hhh--------CCCCCCCcEEEEEeCCCC
Q 013976 218 EYF--------GITGEAPKVLAYTGNDDA 238 (432)
Q Consensus 218 ~~~--------~i~~~~~P~i~i~~~~~~ 238 (432)
+.| |+.+. |+++++++++.
T Consensus 90 ~~y~~~~q~~~gv~g~--Pt~v~l~~dG~ 116 (173)
T 3ira_A 90 NIYMTVCQIILGRGGW--PLNIIMTPGKK 116 (173)
T ss_dssp HHHHHHHHHHHSCCCS--SEEEEECTTSC
T ss_pred HHHHHHHHHHcCCCCC--cceeeECCCCC
Confidence 777 88887 99999976543
No 357
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=97.66 E-value=0.00024 Score=57.94 Aligned_cols=90 Identities=14% Similarity=0.203 Sum_probs=67.7
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhcc-CceEEEEEecCCc----------------ccccchhhhhCCCCCCCc
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFK-GKLIFVYVQMDNE----------------DVGKPVSEYFGITGEAPK 228 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~-~~i~f~~vd~~~~----------------~~~~~l~~~~~i~~~~~P 228 (432)
.++++++.||++| +.|+...+.+.++++++. ..+.|+.++++.. +....+++.||+... |
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~--P 117 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRL--P 117 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSS--S
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCc--c
Confidence 4567788899999 899999999999999998 4699999988761 113478899999887 9
Q ss_pred EEEEEeCCCCceecCCCC--CCHHHHHHHHHH
Q 013976 229 VLAYTGNDDAKKHILDGE--LTLDKIKTFGED 258 (432)
Q Consensus 229 ~i~i~~~~~~~~y~~~~~--~~~~~i~~fi~~ 258 (432)
++++++.++...+.+.|. .+..++.+.+..
T Consensus 118 ~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~ 149 (158)
T 3hdc_A 118 DTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKS 149 (158)
T ss_dssp EEEEECTTSBEEEEEESCCCTTSHHHHHHHHT
T ss_pred eEEEEcCCCCEEEEEeCCCccchHHHHHHHHh
Confidence 988887766556666664 344455555443
No 358
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.65 E-value=4.5e-05 Score=64.67 Aligned_cols=42 Identities=26% Similarity=0.484 Sum_probs=37.1
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeC
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDG 339 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~ 339 (432)
+.+.+|+.|+++||++|..+.|.+.++.+.+.+ ++.|..+.+
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA--DVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT--TEEEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC--CeEEEEEeh
Confidence 457799999999999999999999999999877 688887776
No 359
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=97.63 E-value=0.00016 Score=59.19 Aligned_cols=70 Identities=10% Similarity=0.127 Sum_probs=50.0
Q ss_pred CcEEEEEe-CCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc--------------------c---ccCCCCCCc
Q 013976 298 KDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--------------------H---HRAKSDGFP 353 (432)
Q Consensus 298 ~~~lv~f~-~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~--------------------~---~~~~i~~~P 353 (432)
+.+||+|| +.||++|....|.|.++...+++. . .++.|+++... . ..|++...|
T Consensus 36 ~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~-~-~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~p 113 (159)
T 2a4v_A 36 RVVVFFVYPRASTPGSTRQASGFRDNYQELKEY-A-AVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKTP 113 (159)
T ss_dssp SEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTT-C-EEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCBSSS
T ss_pred CeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhC-C-cEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhCCcccc
Confidence 46888887 899999999999999999999875 3 66666665311 0 245787888
Q ss_pred -------eEEEEeCCCcccCceeccCC
Q 013976 354 -------TILFFPAGNKSFDPINVDVD 373 (432)
Q Consensus 354 -------~i~~~~~g~~~~~~~~y~g~ 373 (432)
++++ ++|..+. .+.|.
T Consensus 114 ~~g~~~~~~li-~~G~i~~---~~~g~ 136 (159)
T 2a4v_A 114 LSGSIRSHFIF-VDGKLKF---KRVKI 136 (159)
T ss_dssp SSCBCCEEEEE-ETTEEEE---EEESC
T ss_pred cCCccceEEEE-cCCEEEE---EEccC
Confidence 5666 8776543 45553
No 360
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=97.61 E-value=0.00025 Score=59.54 Aligned_cols=97 Identities=10% Similarity=0.057 Sum_probs=71.0
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhcc-CceEEEEEecCCc--ccccchhhhhCCCC------------------
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFK-GKLIFVYVQMDNE--DVGKPVSEYFGITG------------------ 224 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~-~~i~f~~vd~~~~--~~~~~l~~~~~i~~------------------ 224 (432)
.++.+++.||++| +.|....+.+.++++++. ..+.++.|+++.. +....+++.+++..
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 138 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAI 138 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTT
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccc
Confidence 4557788889999 899999999999999998 4688888887753 11245566667641
Q ss_pred ---CCCcEEEEEeCCCCceecCCCCC--CHHHHHHHHHHHhcCC
Q 013976 225 ---EAPKVLAYTGNDDAKKHILDGEL--TLDKIKTFGEDFLEGK 263 (432)
Q Consensus 225 ---~~~P~i~i~~~~~~~~y~~~~~~--~~~~i~~fi~~~~~g~ 263 (432)
...|++++++.++...+.+.|.. +.+.+.++|+..+.++
T Consensus 139 ~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~~ 182 (186)
T 1jfu_A 139 GRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATGKA 182 (186)
T ss_dssp TCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC--
T ss_pred cccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHhccc
Confidence 13599988877665556666654 4789999999988753
No 361
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=97.60 E-value=0.0002 Score=58.00 Aligned_cols=84 Identities=7% Similarity=0.040 Sum_probs=64.4
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCc-eEEEEEecCCccc-----------------cc---chhhhhCCCC
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNEDV-----------------GK---PVSEYFGITG 224 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~-i~f~~vd~~~~~~-----------------~~---~l~~~~~i~~ 224 (432)
.++++++.||++| +.|....+.+.+++++|.++ +.++.++++.... .. .+.+.||+..
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~ 113 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVTN 113 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCS
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCccc
Confidence 3557788899999 89999999999999999875 8999998876320 00 2778899987
Q ss_pred CCCcEEEEEeCCCCceecCCCCCCHHHH
Q 013976 225 EAPKVLAYTGNDDAKKHILDGELTLDKI 252 (432)
Q Consensus 225 ~~~P~i~i~~~~~~~~y~~~~~~~~~~i 252 (432)
. |++++++.++...+.+.|..+.++.
T Consensus 114 ~--P~~~lid~~G~i~~~~~g~~~~e~~ 139 (152)
T 2lrt_A 114 L--PSVFLVNRNNELSARGENIKDLDEA 139 (152)
T ss_dssp C--SEEEEEETTTEEEEETTTCSCHHHH
T ss_pred C--ceEEEECCCCeEEEecCCHHHHHHH
Confidence 7 9999998766556667776665543
No 362
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=97.59 E-value=0.00015 Score=67.32 Aligned_cols=94 Identities=14% Similarity=0.071 Sum_probs=75.6
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccC-ceEEEEEecCCc------------------------ccccchhhhh
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNE------------------------DVGKPVSEYF 220 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~-~i~f~~vd~~~~------------------------~~~~~l~~~~ 220 (432)
.+++++|.||++| +.|+...+.+.+++++|.+ .+.|+.|+++.. +....+++.|
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~y 160 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNY 160 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHc
Confidence 3567788899999 8999999999999999986 489999887531 0024678889
Q ss_pred CCCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcC
Q 013976 221 GITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 262 (432)
Q Consensus 221 ~i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g 262 (432)
++... |++++++.+....+.+.|..+.+.+.++|++++..
T Consensus 161 gV~~~--Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL~e 200 (352)
T 2hyx_A 161 RNRYW--PAEYLIDATGTVRHIKFGEGDYNVTETLVRQLLND 200 (352)
T ss_dssp TCCEE--SEEEEECTTSBEEEEEESBCCHHHHHHHHHHHHHH
T ss_pred CCCcc--CEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 99877 99988877665666778888999999999998753
No 363
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=97.58 E-value=0.00011 Score=53.32 Aligned_cols=75 Identities=12% Similarity=0.166 Sum_probs=58.2
Q ss_pred eEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEEEEeCCCCceecCCCCCCHH
Q 013976 172 QLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLD 250 (432)
Q Consensus 172 ~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~~~~~ 250 (432)
+++|+++| +.|+.+.+.+++++.++ +..+|+++ ++.+...||++ . |++++ .++ +.. .|.++.+
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-----~~~vdid~---~~~l~~~~g~~-v--Ptl~~-~~G--~~v--~g~~~~~ 66 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-----FFSVFIDD---DAALESAYGLR-V--PVLRD-PMG--REL--DWPFDAP 66 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-----EEEEECTT---CHHHHHHHTTT-C--SEEEC-TTC--CEE--ESCCCHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-----eEEEECCC---CHHHHHHhCCC-c--CeEEE-ECC--EEE--eCCCCHH
Confidence 67788999 99999999999988765 57899987 56888999996 5 99976 332 332 2778999
Q ss_pred HHHHHHHHHhcC
Q 013976 251 KIKTFGEDFLEG 262 (432)
Q Consensus 251 ~i~~fi~~~~~g 262 (432)
.|.+|++.++..
T Consensus 67 ~L~~~l~~~~~~ 78 (87)
T 1ttz_A 67 RLRAWLDAAPHA 78 (87)
T ss_dssp HHHHHHHTCC--
T ss_pred HHHHHHHHHHHH
Confidence 999999886653
No 364
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=97.58 E-value=0.00012 Score=60.47 Aligned_cols=75 Identities=5% Similarity=-0.095 Sum_probs=56.9
Q ss_pred CCCchhhhcc-CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhC---CCCCCCcEEE
Q 013976 157 TRENAPSVFE-SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFG---ITGEAPKVLA 231 (432)
Q Consensus 157 ~~~~~~~~~~-~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~---i~~~~~P~i~ 231 (432)
+.+.+..+-. .++..++.|+++| ++|+...|.+.+++..+. ++.|+.+|.+. ++.++..|+ +.+. |+++
T Consensus 42 ~~~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-~v~~~~v~~d~---~~~~~~~~~~~~v~~i--Pt~i 115 (167)
T 1z6n_A 42 PSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIISKGR---AEDDLRQRLALERIAI--PLVL 115 (167)
T ss_dssp CHHHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT-TEEEEEECHHH---HHHHTTTTTTCSSCCS--SEEE
T ss_pred CHHHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CcEEEEEECCC---CHHHHHHHHHcCCCCc--CeEE
Confidence 4444444322 3456678899999 999999999999999886 59999999876 456777776 7666 9999
Q ss_pred EEeCCC
Q 013976 232 YTGNDD 237 (432)
Q Consensus 232 i~~~~~ 237 (432)
+++.++
T Consensus 116 ~~~~~G 121 (167)
T 1z6n_A 116 VLDEEF 121 (167)
T ss_dssp EECTTC
T ss_pred EECCCC
Confidence 987654
No 365
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=97.57 E-value=0.00027 Score=58.85 Aligned_cols=90 Identities=8% Similarity=0.093 Sum_probs=70.1
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCc--------------------ccccchhhhhCCCCC
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNE--------------------DVGKPVSEYFGITGE 225 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~--------------------~~~~~l~~~~~i~~~ 225 (432)
.++++++.||++| +.|....+.+.+++++ .+.|+.|++++. +....+++.||+...
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 133 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ---GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYGA 133 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC---CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCCC
Confidence 3567788899999 8999999999999987 377777764220 013467788999887
Q ss_pred CCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 226 APKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 226 ~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
|+.++++.++...+.+.|..+.+.+.+++..++.
T Consensus 134 --P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 167 (176)
T 3kh7_A 134 --PETYLIDKQGIIRHKIVGVVDQKVWREQLAPLYQ 167 (176)
T ss_dssp --CEEEEECTTCBEEEEEESCCCHHHHHHHTHHHHH
T ss_pred --CeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 9888887766666777888999999999998875
No 366
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.56 E-value=0.00013 Score=64.25 Aligned_cols=83 Identities=10% Similarity=0.141 Sum_probs=59.9
Q ss_pred CCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCC-----------------------------------
Q 013976 297 SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT----------------------------------- 341 (432)
Q Consensus 297 ~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~----------------------------------- 341 (432)
.+.+|+.|+.+||++|+.+.+.+.++.+. + ++.+..++..-
T Consensus 97 ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g--~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~ 172 (241)
T 1v58_A 97 APVIVYVFADPFCPYCKQFWQQARPWVDS--G--KVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLN 172 (241)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHT--T--SEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCC
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHhC--C--cEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCC
Confidence 45689999999999999999998887653 2 57776655421
Q ss_pred --------c--cc-------ccCCCCCCceEEEEeC-CCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 342 --------N--EH-------HRAKSDGFPTILFFPA-GNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 342 --------~--~~-------~~~~i~~~P~i~~~~~-g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
. .. ..++|.++|++++... |.. ....|..+.+.|.++|++..
T Consensus 173 ~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~----~~~~G~~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 173 VPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTL----QQAVGLPDQKTLNIIMGNKL 232 (241)
T ss_dssp CCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEE----EEEESSCCHHHHHHHTTC--
T ss_pred ccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCE----EEecCCCCHHHHHHHHHHHH
Confidence 0 00 2469999999999863 421 15778889999999988764
No 367
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=97.56 E-value=0.00021 Score=57.00 Aligned_cols=89 Identities=8% Similarity=0.143 Sum_probs=63.8
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHH---HHHhccC-ceEEEEEecCCcc-ccc------------------ch--hhhh
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEE---AAKSFKG-KLIFVYVQMDNED-VGK------------------PV--SEYF 220 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~---~a~~~~~-~i~f~~vd~~~~~-~~~------------------~l--~~~~ 220 (432)
.++++++.||++| +.|....+.+.+ +++++++ .+.++.++.+... ... .+ .+.|
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLY 105 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHc
Confidence 4567788899999 899999999888 8888865 4888888877521 000 11 2378
Q ss_pred CCCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHh
Q 013976 221 GITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 260 (432)
Q Consensus 221 ~i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~ 260 (432)
|+... |++++++.++...+ +..+.+.|.+++++..
T Consensus 106 ~v~~~--P~~~lid~~G~i~~---~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 106 DIRAT--PTIYLLDGRKRVIL---KDTSMEQLIDYLATQA 140 (142)
T ss_dssp CCCSS--SEEEEECTTCBEEE---CSCCHHHHHHHHHC--
T ss_pred CCCCC--CeEEEECCCCCEEe---cCCCHHHHHHHHHHHc
Confidence 88777 99988876543333 5688999999998754
No 368
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=97.56 E-value=0.00015 Score=54.63 Aligned_cols=76 Identities=13% Similarity=0.115 Sum_probs=60.8
Q ss_pred cceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEEEEeCCCCceecCCCCCC
Q 013976 170 KNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELT 248 (432)
Q Consensus 170 ~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~~~ 248 (432)
+.+++|+++| +.|+.+.+.+++++.++. +.|..+|+++ .+.+...||++ .|+++++.++ +.. ..|.++
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~--i~~~~vDId~---d~~l~~~ygv~---VP~l~~~~dG--~~v-~~g~~~ 98 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW--FELEVINIDG---NEHLTRLYNDR---VPVLFAVNED--KEL-CHYFLD 98 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC--CCCEEEETTT---CHHHHHHSTTS---CSEEEETTTT--EEE-ECSSCC
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC--CeEEEEECCC---CHHHHHHhCCC---CceEEEEECC--EEE-EecCCC
Confidence 4477888889 999999999999999875 8899999987 45788899985 5999776443 222 357789
Q ss_pred HHHHHHHH
Q 013976 249 LDKIKTFG 256 (432)
Q Consensus 249 ~~~i~~fi 256 (432)
.+.|.+|+
T Consensus 99 ~~~L~~~L 106 (107)
T 2fgx_A 99 SDVIGAYL 106 (107)
T ss_dssp CHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999887
No 369
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=97.54 E-value=0.00016 Score=62.80 Aligned_cols=88 Identities=11% Similarity=0.101 Sum_probs=63.7
Q ss_pred CCCcEEEEEe-CCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc------------------------------
Q 013976 296 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH------------------------------ 344 (432)
Q Consensus 296 ~~~~~lv~f~-~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~------------------------------ 344 (432)
.++++||+|| ++||..|....|.|.++...|+.. ++.++.|+++....
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~-~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~ 133 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENK-NVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDIS 133 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHH
Confidence 4578999999 999999999999999999999752 68888887754110
Q ss_pred ccCCC-----CCCceEEEEe-CCCcccCceeccC----CCCHHHHHHHHHhcC
Q 013976 345 HRAKS-----DGFPTILFFP-AGNKSFDPINVDV----DRTVVALYKFLKKNA 387 (432)
Q Consensus 345 ~~~~i-----~~~P~i~~~~-~g~~~~~~~~y~g----~~~~~~l~~fi~~~~ 387 (432)
..|++ ..+|+.+++. +|..+. .+.| ..+.+.|++.|+...
T Consensus 134 ~~ygv~~~~g~~~P~~~lID~~G~I~~---~~~g~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 134 KNYNVLYDNSFALRGLFIIDKNGCVRH---QTVNDLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp HHTTCEETTTEECEEEEEECTTSBEEE---EEEECTTCCCCHHHHHHHHHHHH
T ss_pred HHcCCcccCCCccceEEEECCCCeEEE---EEecCCCCCCCHHHHHHHHHHHh
Confidence 12355 3579999994 554432 2223 357889998888764
No 370
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.53 E-value=2.3e-05 Score=61.84 Aligned_cols=74 Identities=8% Similarity=0.077 Sum_probs=48.5
Q ss_pred EEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCc---c-----c-ccCCCCCCceEEEEeCCCcccCceec-
Q 013976 301 LLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN---E-----H-HRAKSDGFPTILFFPAGNKSFDPINV- 370 (432)
Q Consensus 301 lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~---~-----~-~~~~i~~~P~i~~~~~g~~~~~~~~y- 370 (432)
+++|+++||++|+.+.+.|.++. +.+..+|++.+ . . ..+++.++|+++ .+|..+. .+
T Consensus 29 vvvf~~~~Cp~C~~~~~~L~~~~--------i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~--i~G~~ig---g~~ 95 (130)
T 2cq9_A 29 VVIFSKTSCSYCTMAKKLFHDMN--------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF--VNGTFIG---GAT 95 (130)
T ss_dssp EEEEECSSCSHHHHHHHHHHHHT--------CCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEE--ETTEEEE---EHH
T ss_pred EEEEEcCCChHHHHHHHHHHHcC--------CCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEE--ECCEEEc---ChH
Confidence 45599999999999999998872 44556777765 2 1 356899999984 3665431 21
Q ss_pred --cCCCCHHHHHHHHHhcC
Q 013976 371 --DVDRTVVALYKFLKKNA 387 (432)
Q Consensus 371 --~g~~~~~~l~~fi~~~~ 387 (432)
.+......|.++|++..
T Consensus 96 ~l~~~~~~~~L~~~L~~~g 114 (130)
T 2cq9_A 96 DTHRLHKEGKLLPLVHQCY 114 (130)
T ss_dssp HHHHHHHHTSSHHHHHHHS
T ss_pred HHHHHHHcCcHHHHHHHcC
Confidence 11223445677777653
No 371
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.51 E-value=0.00016 Score=54.41 Aligned_cols=71 Identities=14% Similarity=0.129 Sum_probs=49.9
Q ss_pred CCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc--c-----c----cCCCCCCceEEEEeCCCccc
Q 013976 297 SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--H-----H----RAKSDGFPTILFFPAGNKSF 365 (432)
Q Consensus 297 ~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~--~-----~----~~~i~~~P~i~~~~~g~~~~ 365 (432)
+...+++|+++||++|+.+.+.+.++ ++.+-.+|++..+ . . ..+..++|++++ +|.
T Consensus 20 ~~~~v~ly~~~~Cp~C~~ak~~L~~~--------~i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i--~~~--- 86 (103)
T 3nzn_A 20 DRGKVIMYGLSTCVWCKKTKKLLTDL--------GVDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII--NDE--- 86 (103)
T ss_dssp CCSCEEEEECSSCHHHHHHHHHHHHH--------TBCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE--TTT---
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHc--------CCCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE--CCC---
Confidence 45567889999999999999999887 2445556665421 1 1 147899999876 331
Q ss_pred CceeccCCCCHHHHHHHH
Q 013976 366 DPINVDVDRTVVALYKFL 383 (432)
Q Consensus 366 ~~~~y~g~~~~~~l~~fi 383 (432)
.+.|+.+.+.|.++|
T Consensus 87 ---~~igg~~~~~l~~~L 101 (103)
T 3nzn_A 87 ---KAIVGFKEKEIRESL 101 (103)
T ss_dssp ---EEEESCCHHHHHHHT
T ss_pred ---EEEEcCCHHHHHHHh
Confidence 345678888888776
No 372
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=97.50 E-value=0.00067 Score=58.66 Aligned_cols=96 Identities=11% Similarity=0.108 Sum_probs=73.1
Q ss_pred CCc-ceEEEEEeC-cchhhhHHHHHHHHHhccCc-eEEEEEecCCc--------------------------ccccchhh
Q 013976 168 PIK-NQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNE--------------------------DVGKPVSE 218 (432)
Q Consensus 168 ~~~-~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~-i~f~~vd~~~~--------------------------~~~~~l~~ 218 (432)
+++ +++.|+++| +.|....+.+.+++++|.++ +.|+.|+++.. +....+.+
T Consensus 58 gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 137 (218)
T 3u5r_E 58 DSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAK 137 (218)
T ss_dssp TCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHH
Confidence 444 677888999 89999999999999999875 88999988421 11357789
Q ss_pred hhCCCCCCCcEEEEEeCCCCceec---------CCCCCCHHHHHHHHHHHhcCCcC
Q 013976 219 YFGITGEAPKVLAYTGNDDAKKHI---------LDGELTLDKIKTFGEDFLEGKLK 265 (432)
Q Consensus 219 ~~~i~~~~~P~i~i~~~~~~~~y~---------~~~~~~~~~i~~fi~~~~~g~l~ 265 (432)
.||+... |++++++.+....|. ..+..+.+.|.+.|+.++.|+-.
T Consensus 138 ~~~v~~~--P~~~liD~~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~~~~ 191 (218)
T 3u5r_E 138 AYGAACT--PDFFLYDRERRLVYHGQFDDARPGNGKDVTGADLRAAVDAVLKGKDV 191 (218)
T ss_dssp HHTCCEE--SEEEEECTTCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHTTCCC
T ss_pred HcCCCCC--CeEEEECCCCcEEEeccccccccccccccCHHHHHHHHHHHHcCCCC
Confidence 9999887 999898766544443 12346789999999999987643
No 373
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=97.49 E-value=0.00016 Score=60.52 Aligned_cols=86 Identities=8% Similarity=0.025 Sum_probs=60.2
Q ss_pred CCcEEEEEe-CCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc-----------------------ccCCCCC-
Q 013976 297 SKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH-----------------------HRAKSDG- 351 (432)
Q Consensus 297 ~~~~lv~f~-~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~-----------------------~~~~i~~- 351 (432)
++++||+|| +.||..|....+.+.++...|+.. ++.++.|.++.... ..|++..
T Consensus 51 Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~-~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~ 129 (179)
T 3ixr_A 51 NQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQI-NATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIKE 129 (179)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTT-TEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEEE
T ss_pred CCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCccc
Confidence 567888887 999999999999999999999864 68888887764221 1234432
Q ss_pred -----------CceEEEE-eCCCcccCceeccC---CCCHHHHHHHHHhc
Q 013976 352 -----------FPTILFF-PAGNKSFDPINVDV---DRTVVALYKFLKKN 386 (432)
Q Consensus 352 -----------~P~i~~~-~~g~~~~~~~~y~g---~~~~~~l~~fi~~~ 386 (432)
.|+.+++ ++|..+. .+.+ ....+.+++.|++.
T Consensus 130 ~~~~g~~~~~~~p~~~lID~~G~I~~---~~~~~~~~~~~~~il~~l~~l 176 (179)
T 3ixr_A 130 KTMYGRQVIGIERSTFLIGPTHRIVE---AWRQVKVPGHAEEVLNKLKAH 176 (179)
T ss_dssp ECCC--CEEEECCEEEEECTTSBEEE---EECSCCSTTHHHHHHHHHHHH
T ss_pred ccccCcccCCcceEEEEECCCCEEEE---EEcCCCCCCCHHHHHHHHHHH
Confidence 5888888 5555432 2333 44567788777754
No 374
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.48 E-value=7.8e-05 Score=54.73 Aligned_cols=68 Identities=12% Similarity=0.091 Sum_probs=47.8
Q ss_pred EEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc--------c---ccCCCCCCceEEEEeCCCcccCce
Q 013976 300 VLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--------H---HRAKSDGFPTILFFPAGNKSFDPI 368 (432)
Q Consensus 300 ~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~--------~---~~~~i~~~P~i~~~~~g~~~~~~~ 368 (432)
.+++|+++||++|+.+...+.++. +.+-.+|++..+ . ..+++.++|++++ +|.
T Consensus 13 ~v~ly~~~~Cp~C~~~~~~L~~~g--------i~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g~------ 76 (92)
T 3ic4_A 13 EVLMYGLSTCPHCKRTLEFLKREG--------VDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GDK------ 76 (92)
T ss_dssp SSEEEECTTCHHHHHHHHHHHHHT--------CCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TTE------
T ss_pred eEEEEECCCChHHHHHHHHHHHcC--------CCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CCE------
Confidence 367799999999999998888872 334445555211 1 2457889999987 442
Q ss_pred eccCCCCHHHHHHHHH
Q 013976 369 NVDVDRTVVALYKFLK 384 (432)
Q Consensus 369 ~y~g~~~~~~l~~fi~ 384 (432)
..++.+.+.|.++|.
T Consensus 77 -~i~G~~~~~l~~~l~ 91 (92)
T 3ic4_A 77 -HVLGYNEEKLKELIR 91 (92)
T ss_dssp -EEESCCHHHHHHHHH
T ss_pred -EEeCCCHHHHHHHhc
Confidence 234568999999885
No 375
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.48 E-value=0.00012 Score=53.30 Aligned_cols=54 Identities=19% Similarity=0.369 Sum_probs=39.7
Q ss_pred EEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCC--Cccc--ccC-CCCCCceEEEEeCCCc
Q 013976 300 VLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT--TNEH--HRA-KSDGFPTILFFPAGNK 363 (432)
Q Consensus 300 ~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~--~~~~--~~~-~i~~~P~i~~~~~g~~ 363 (432)
.+++|+++||++|+.+.+.+.++ .+.+..+|++ .... ..+ ++.++|+++ .+|..
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~--------~i~~~~vdv~~~~~~~l~~~~~~~~~vP~l~--~~g~~ 65 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKK--------GVKYTDIDASTSLRQEMVQRANGRNTFPQIF--IGDYH 65 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHH--------TCCEEEECSCHHHHHHHHHHHHSSCCSCEEE--ETTEE
T ss_pred eEEEEECCCChhHHHHHHHHHHc--------CCCcEEEECCHHHHHHHHHHhCCCCCcCEEE--ECCEE
Confidence 47789999999999999988876 3567778887 1111 346 899999984 35543
No 376
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.46 E-value=0.00018 Score=51.33 Aligned_cols=66 Identities=12% Similarity=0.159 Sum_probs=45.9
Q ss_pred EEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc------ccCCCCCCceEEEEeCCCcccCceeccCCC
Q 013976 301 LLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH------HRAKSDGFPTILFFPAGNKSFDPINVDVDR 374 (432)
Q Consensus 301 lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~------~~~~i~~~P~i~~~~~g~~~~~~~~y~g~~ 374 (432)
+++|+++||++|+.+.+.+.++ ++.+..+|++.+.. ..+++.++|+++ .+|..+ .
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~--------~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~--~~g~~i------~--- 63 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK--------GVSFQELPIDGNAAKREEMIKRSGRTTVPQIF--IDAQHI------G--- 63 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH--------TCCCEEEECTTCSHHHHHHHHHHSSCCSCEEE--ETTEEE------E---
T ss_pred EEEEECCCChhHHHHHHHHHHC--------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEEE--ECCEEE------e---
Confidence 6789999999999999888875 35566778776533 246889999984 355432 2
Q ss_pred CHHHHHHHHHh
Q 013976 375 TVVALYKFLKK 385 (432)
Q Consensus 375 ~~~~l~~fi~~ 385 (432)
....|.+++++
T Consensus 64 g~~~i~~~~~~ 74 (82)
T 1fov_A 64 GYDDLYALDAR 74 (82)
T ss_dssp SHHHHHHHHHT
T ss_pred CHHHHHHHHHC
Confidence 23566666654
No 377
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.45 E-value=1.9e-05 Score=63.66 Aligned_cols=76 Identities=8% Similarity=0.105 Sum_probs=46.2
Q ss_pred EEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCc---cc------ccCCCCCCceEEEEeCCCcccCceecc
Q 013976 301 LLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN---EH------HRAKSDGFPTILFFPAGNKSFDPINVD 371 (432)
Q Consensus 301 lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~---~~------~~~~i~~~P~i~~~~~g~~~~~~~~y~ 371 (432)
+++|+++||++|+.+.+.|.+++ +.+..+|++.+ .. ..+++.++|+++ .+|..+...-...
T Consensus 51 Vvvf~~~~Cp~C~~~k~~L~~~~--------i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~if--i~G~~igG~d~l~ 120 (146)
T 2ht9_A 51 VVIFSKTSCSYCTMAKKLFHDMN--------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF--VNGTFIGGATDTH 120 (146)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHT--------CCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEE--ETTEEEESHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHHcC--------CCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEE--ECCEEEeCchHHH
Confidence 45599999999999999998872 34455666654 21 356899999984 4664431000011
Q ss_pred CCCCHHHHHHHHHhc
Q 013976 372 VDRTVVALYKFLKKN 386 (432)
Q Consensus 372 g~~~~~~l~~fi~~~ 386 (432)
+......|.++|++.
T Consensus 121 ~l~~~g~L~~~L~~~ 135 (146)
T 2ht9_A 121 RLHKEGKLLPLVHQC 135 (146)
T ss_dssp HHHHTTCHHHHHHHT
T ss_pred HHHHcChHHHHHHHc
Confidence 112233466666654
No 378
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.42 E-value=0.00013 Score=54.37 Aligned_cols=57 Identities=11% Similarity=0.111 Sum_probs=43.2
Q ss_pred CCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--cc----C-CCCCCceEEEEeCCCc
Q 013976 297 SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--HR----A-KSDGFPTILFFPAGNK 363 (432)
Q Consensus 297 ~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~~----~-~i~~~P~i~~~~~g~~ 363 (432)
+..-+++|+++||+.|+.+...|.++ ++.+..+|++.++. .. . +..++|++ |-+|..
T Consensus 14 ~~~~v~vy~~~~Cp~C~~ak~~L~~~--------~i~y~~idI~~~~~~~~~l~~~~~g~~~vP~i--fi~g~~ 77 (99)
T 3qmx_A 14 VSAKIEIYTWSTCPFCMRALALLKRK--------GVEFQEYCIDGDNEAREAMAARANGKRSLPQI--FIDDQH 77 (99)
T ss_dssp CCCCEEEEECTTCHHHHHHHHHHHHH--------TCCCEEEECTTCHHHHHHHHHHTTTCCCSCEE--EETTEE
T ss_pred CCCCEEEEEcCCChhHHHHHHHHHHC--------CCCCEEEEcCCCHHHHHHHHHHhCCCCCCCEE--EECCEE
Confidence 45678889999999999999999887 36677788887654 22 2 78899987 446643
No 379
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=97.40 E-value=0.00034 Score=56.54 Aligned_cols=90 Identities=10% Similarity=0.042 Sum_probs=58.9
Q ss_pred ccCCCcceEEEEEeC-cchhhhHHHHHHHHH--hccCceEEEEEecCCcccccchhhhhCCCCCCCcEEEEEeCCCCcee
Q 013976 165 FESPIKNQLLLFAVS-NDSEKLLPVFEEAAK--SFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKH 241 (432)
Q Consensus 165 ~~~~~~~~i~~~~~~-~~~~~~~~~~~~~a~--~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y 241 (432)
...+++++|.|+++| +.|+.+.+.+.+... .+.+ ..|+.|+++.+ ...+...+++.+. |++++++.++....
T Consensus 41 ~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~-~~fv~V~vD~e--~~~~~~~~~v~~~--PT~~f~~~~G~~v~ 115 (151)
T 3ph9_A 41 QKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ-NKFIMLNLMHE--TTDKNLSPDGQYV--PRIMFVDPSLTVRA 115 (151)
T ss_dssp HHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH-HTCEEEEESSC--CSCGGGCTTCCCS--SEEEEECTTSCBCT
T ss_pred HHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh-cCeEEEEecCC--chhhHhhcCCCCC--CEEEEECCCCCEEE
Confidence 356778889999999 999999998876421 2212 23455555432 3355677888776 99999985554555
Q ss_pred cCCCC-------CCHHHHHHHHHHH
Q 013976 242 ILDGE-------LTLDKIKTFGEDF 259 (432)
Q Consensus 242 ~~~~~-------~~~~~i~~fi~~~ 259 (432)
...|. ...+.+.++++..
T Consensus 116 ~~~G~~~~~~~~~~~~~~~~ll~~~ 140 (151)
T 3ph9_A 116 DIAGRYSNRLYTYEPRDLPLLIENM 140 (151)
T ss_dssp TCCCSCTTSTTCCCGGGHHHHHHHH
T ss_pred EEeCCcCCcccccchhhHHHHHHHH
Confidence 56665 5556555555554
No 380
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=97.39 E-value=0.00085 Score=55.45 Aligned_cols=91 Identities=9% Similarity=0.071 Sum_probs=65.4
Q ss_pred CCcEEEEEeCCCCh-hhhhhHHHHHHHHHHhcCC-CCEEEEEEeCCCccc------------------------------
Q 013976 297 SKDVLLEIYAPWCG-HCQAFEPTYNKLAKHLRGV-DSIVIAKMDGTTNEH------------------------------ 344 (432)
Q Consensus 297 ~~~~lv~f~~~~c~-~c~~~~~~~~~la~~~~~~-~~~~~~~id~~~~~~------------------------------ 344 (432)
++++||.||++||. .|....+.+.++...+... .++.++.|.++..+.
T Consensus 28 Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~ 107 (170)
T 3me7_A 28 GKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLF 107 (170)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHHH
T ss_pred CCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHHH
Confidence 68999999999997 6999999999999999642 357777777652110
Q ss_pred ---ccCC---------CCCCceEEEE-eCCCcccCceeccC-CCCHHHHHHHHHhcCCCC
Q 013976 345 ---HRAK---------SDGFPTILFF-PAGNKSFDPINVDV-DRTVVALYKFLKKNASIP 390 (432)
Q Consensus 345 ---~~~~---------i~~~P~i~~~-~~g~~~~~~~~y~g-~~~~~~l~~fi~~~~~~~ 390 (432)
..++ +...|+++++ ++|+.+. .|.| ..+.+.|.+.|++.....
T Consensus 108 ~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~---~~~g~~~~~~~i~~~l~~~~~~~ 164 (170)
T 3me7_A 108 KLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKD---YIYGVNYNYLEFVNALRLARGEG 164 (170)
T ss_dssp HHHHHTTCCCEEETTEEECCCEEEEECTTSBEEE---EEESSSCCHHHHHHHHHHHTTCS
T ss_pred HHHHHCCeEEecCCCccccCceEEEECCCCeEEE---EEeCCCCCHHHHHHHHHHhhccc
Confidence 0111 3455788888 5555432 4566 578999999999887643
No 381
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.39 E-value=2e-05 Score=61.04 Aligned_cols=57 Identities=14% Similarity=0.272 Sum_probs=41.1
Q ss_pred EEEEeCCCChhhhhh-HHHHHHHHHHhcCCCCEEEEEEeCCCccc---------ccCCCCCCceEEEEeCCCcc
Q 013976 301 LLEIYAPWCGHCQAF-EPTYNKLAKHLRGVDSIVIAKMDGTTNEH---------HRAKSDGFPTILFFPAGNKS 364 (432)
Q Consensus 301 lv~f~~~~c~~c~~~-~~~~~~la~~~~~~~~~~~~~id~~~~~~---------~~~~i~~~P~i~~~~~g~~~ 364 (432)
+++|+++||++|+.+ .+.+.+++. ..+.+..+|++.++. ..+++.++|++ |.+|+.+
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~~~~-----~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~v--fi~g~~i 93 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEKLKV-----PRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNI--YINGKHI 93 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTSCC-----CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTEEE
T ss_pred EEEEEcCCCcCHHHHHHHHHHHcCC-----CCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEE--EECCEEE
Confidence 667999999999998 777766531 137777888876641 35688999987 5566543
No 382
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=97.37 E-value=0.00021 Score=62.98 Aligned_cols=87 Identities=11% Similarity=0.077 Sum_probs=62.3
Q ss_pred CCc-EEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc--------------------------c---cc
Q 013976 297 SKD-VLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--------------------------H---HR 346 (432)
Q Consensus 297 ~~~-~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~--------------------------~---~~ 346 (432)
++. +|++|+++||..|....+.|.+++..|++. ++.++.|+++... . ..
T Consensus 33 GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~-gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~~ 111 (249)
T 3a2v_A 33 GKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRL-GVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARR 111 (249)
T ss_dssp TCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHHH
T ss_pred CCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhC-CcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHHHH
Confidence 454 566789999999999999999999999863 6888888886421 0 23
Q ss_pred CCCC-------CCceEEEE-eCCCcccCceeccC----CCCHHHHHHHHHhcC
Q 013976 347 AKSD-------GFPTILFF-PAGNKSFDPINVDV----DRTVVALYKFLKKNA 387 (432)
Q Consensus 347 ~~i~-------~~P~i~~~-~~g~~~~~~~~y~g----~~~~~~l~~fi~~~~ 387 (432)
|++. .+|+++++ ++|.... .+.| +++.+.|...|+...
T Consensus 112 ygv~~~~~g~~~~p~~fIID~dG~I~~---~~~~~~~~gr~~~Ellr~I~alq 161 (249)
T 3a2v_A 112 LGLLHAESATHTVRGVFIVDARGVIRT---MLYYPMELGRLVDEILRIVKALK 161 (249)
T ss_dssp HTCCCTTCSSSCCEEEEEECTTSBEEE---EEEECTTBCCCHHHHHHHHHHHH
T ss_pred hCCccccCCCcccceEEEECCCCeEEE---EEecCCcccchhHHHHHHHHHHH
Confidence 4565 89999999 4554431 2222 368888888887653
No 383
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.34 E-value=0.0028 Score=52.51 Aligned_cols=99 Identities=14% Similarity=0.103 Sum_probs=69.2
Q ss_pred ccchhhhhc-------CCCcEEEEEeCCCChhhhhhHHHH---HHHHHHhcCCCCEEEEEEeCCCcc-------------
Q 013976 287 NNFDEIVLD-------ESKDVLLEIYAPWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTTNE------------- 343 (432)
Q Consensus 287 ~~~~~~~~~-------~~~~~lv~f~~~~c~~c~~~~~~~---~~la~~~~~~~~~~~~~id~~~~~------------- 343 (432)
.+|.+.+.. ..|.++|+++++||..|..+.... .++...++. ++.+..+|++..+
T Consensus 38 gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~--nfV~w~~dv~~~e~~~~~~~~~~~~~ 115 (178)
T 2ec4_A 38 GSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQ--NFITWAWDLTKDSNRARFLTMCNRHF 115 (178)
T ss_dssp SCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHH--TEEEEEEECCSHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHc--CEEEEEEeCCCchhhhhhhhhhhhhh
Confidence 566665532 358899999999999998886332 235555555 6999999998776
Q ss_pred c-------ccCCCCCCceEEEEe-CCCcccCceeccCCCCHHHHHHHHHhcC
Q 013976 344 H-------HRAKSDGFPTILFFP-AGNKSFDPINVDVDRTVVALYKFLKKNA 387 (432)
Q Consensus 344 ~-------~~~~i~~~P~i~~~~-~g~~~~~~~~y~g~~~~~~l~~fi~~~~ 387 (432)
. ..+.+.++|++.++. .+....-.-...|..+.+.+++.|.+..
T Consensus 116 g~~~a~~~~~~~~~~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~ 167 (178)
T 2ec4_A 116 GSVVAQTIRTQKTDQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAM 167 (178)
T ss_dssp CHHHHHHHHHSCSTTCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHH
Confidence 1 127999999999993 3322111125789999999888876543
No 384
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=97.34 E-value=0.00051 Score=54.86 Aligned_cols=69 Identities=10% Similarity=0.043 Sum_probs=55.4
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhcc--CceEEEEEecCCcc---------------------cccchhhhhCC
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFK--GKLIFVYVQMDNED---------------------VGKPVSEYFGI 222 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~--~~i~f~~vd~~~~~---------------------~~~~l~~~~~i 222 (432)
.++++++.|+++| +.|+...+.+.++++++. +.+.++.|+++... ....+++.||+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDV 106 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCC
Confidence 4567788899999 999999999999999998 47888888887521 02467889999
Q ss_pred CCCCCcEEEEEe-CCC
Q 013976 223 TGEAPKVLAYTG-NDD 237 (432)
Q Consensus 223 ~~~~~P~i~i~~-~~~ 237 (432)
... |++++++ .++
T Consensus 107 ~~~--P~~~lid~~~G 120 (144)
T 1i5g_A 107 KSI--PTLVGVEADSG 120 (144)
T ss_dssp CSS--SEEEEEETTTC
T ss_pred CCC--CEEEEEECCCC
Confidence 887 9999997 443
No 385
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=97.33 E-value=0.001 Score=54.72 Aligned_cols=94 Identities=10% Similarity=0.037 Sum_probs=70.0
Q ss_pred CCcceEEEEEeC-cc-hhhhHHHHHHHHHhcc-----CceEEEEEecCCccc-------------------------ccc
Q 013976 168 PIKNQLLLFAVS-ND-SEKLLPVFEEAAKSFK-----GKLIFVYVQMDNEDV-------------------------GKP 215 (432)
Q Consensus 168 ~~~~~i~~~~~~-~~-~~~~~~~~~~~a~~~~-----~~i~f~~vd~~~~~~-------------------------~~~ 215 (432)
++.+++.|++.| ++ |....+.+.+++.+|. ..+.++.|.++.... ...
T Consensus 26 gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 105 (171)
T 2rli_A 26 GQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVAQ 105 (171)
T ss_dssp TSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHHH
T ss_pred CCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHH
Confidence 556778888999 77 9999999999999995 368888887763100 114
Q ss_pred hhhhhCCCCCC-------------CcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 216 VSEYFGITGEA-------------PKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 216 l~~~~~i~~~~-------------~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
+++.||+...+ .|++++++.++...+.+.|..+.+.|.+.|+.++.
T Consensus 106 ~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 106 ASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHMA 164 (171)
T ss_dssp HHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 67788887651 12777887666566667788899999999998875
No 386
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=97.33 E-value=0.00045 Score=56.52 Aligned_cols=93 Identities=10% Similarity=0.055 Sum_probs=69.9
Q ss_pred CCCcceEEEEEeC-cc-hhhhHHHHHHHHHhccC-----ceEEEEEecCCccc-------------------------cc
Q 013976 167 SPIKNQLLLFAVS-ND-SEKLLPVFEEAAKSFKG-----KLIFVYVQMDNEDV-------------------------GK 214 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~-~~~~~~~~~~~a~~~~~-----~i~f~~vd~~~~~~-------------------------~~ 214 (432)
.++.+++.|++.| ++ |....+.+.++..++.+ .+.++.|.++.... ..
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 3557778888999 87 99999999999999863 68888887764210 11
Q ss_pred chhhhhCCCCCCCc---------------EEEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 215 PVSEYFGITGEAPK---------------VLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 215 ~l~~~~~i~~~~~P---------------~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
.+.+.||+... | ++++++.++...+.+.|..+.+.|.+.|...+.
T Consensus 102 ~~~~~~~v~~~--p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 102 QVARAYRVYYS--PGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHMR 161 (164)
T ss_dssp HHHHTTTCCEE--EEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHHHG
T ss_pred HHHHhcCeEEE--ecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 36778888765 5 677777666566667788899999999998764
No 387
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=97.32 E-value=0.00077 Score=55.68 Aligned_cols=92 Identities=9% Similarity=0.017 Sum_probs=65.1
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCc-eEEEEEecCC--------cccccchh-h-----------------
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDN--------EDVGKPVS-E----------------- 218 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~-i~f~~vd~~~--------~~~~~~l~-~----------------- 218 (432)
.++++++.||++| +.|. ..+.+.+++.+|.++ +.++.|+++. .+....++ +
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~~ 109 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGG 109 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCCc
Confidence 4567788899999 8999 999999999999875 8888887631 00011222 1
Q ss_pred ------------hhCCCCCCCc------EEEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 219 ------------YFGITGEAPK------VLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 219 ------------~~~i~~~~~P------~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
.+|+.+. | +.++++.++...+.+.|..+.+.|.+.|+.++.
T Consensus 110 ~~~~~~~~~~~~~~~v~~~--P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 110 NEDPVYKFLKSQKSGMLGL--RGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELLK 168 (171)
T ss_dssp TBCHHHHHHHHHSCCSSSC--CSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHHHT
T ss_pred cchHHHHHHHhccCCcCCC--CcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHHHH
Confidence 2455554 7 777777666666777888899999999998875
No 388
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=97.32 E-value=0.00052 Score=55.03 Aligned_cols=69 Identities=14% Similarity=0.151 Sum_probs=55.2
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhcc--CceEEEEEecCCcc---------------------cccchhhhhCC
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFK--GKLIFVYVQMDNED---------------------VGKPVSEYFGI 222 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~--~~i~f~~vd~~~~~---------------------~~~~l~~~~~i 222 (432)
.++++++.|+++| +.|+...+.+.++++++. +.+.++.++++... ....+++.||+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNV 106 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTC
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCC
Confidence 4557788899999 999999999999999998 46888888887521 12467889999
Q ss_pred CCCCCcEEEEEe-CCC
Q 013976 223 TGEAPKVLAYTG-NDD 237 (432)
Q Consensus 223 ~~~~~P~i~i~~-~~~ 237 (432)
... |++++++ .++
T Consensus 107 ~~~--Pt~~lid~~~G 120 (146)
T 1o8x_A 107 ESI--PTLIGVDADSG 120 (146)
T ss_dssp CSS--SEEEEEETTTC
T ss_pred CCC--CEEEEEECCCC
Confidence 887 9999997 443
No 389
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=97.32 E-value=0.00063 Score=55.94 Aligned_cols=68 Identities=12% Similarity=0.101 Sum_probs=55.3
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccC--ceEEEEEecCCccc---------------------ccchhhhhCC
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKG--KLIFVYVQMDNEDV---------------------GKPVSEYFGI 222 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~--~i~f~~vd~~~~~~---------------------~~~l~~~~~i 222 (432)
.+++++|.||++| +.|+...+.+.+++++|.+ .+.|+.|+++.... ...+++.|++
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 4567788899999 9999999999999999985 68888888776410 0578899999
Q ss_pred CCCCCcEEEEEeCC
Q 013976 223 TGEAPKVLAYTGND 236 (432)
Q Consensus 223 ~~~~~P~i~i~~~~ 236 (432)
... |++++++.+
T Consensus 127 ~~~--Pt~~lid~~ 138 (165)
T 3s9f_A 127 ESI--PTLIGLNAD 138 (165)
T ss_dssp CSS--SEEEEEETT
T ss_pred CCC--CEEEEEeCC
Confidence 887 999999865
No 390
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=97.28 E-value=0.00033 Score=59.99 Aligned_cols=43 Identities=23% Similarity=0.191 Sum_probs=37.0
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCC
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 340 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~ 340 (432)
.++.+||.||++||++| ...|.|.++...|++. ++.+.-|+++
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~-g~~vlgvs~d 79 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPF-GLVILGFPCN 79 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGG-TEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccC-CEEEEEEECc
Confidence 36799999999999999 5788999999999864 6888888865
No 391
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=97.26 E-value=0.0006 Score=54.38 Aligned_cols=66 Identities=15% Similarity=0.158 Sum_probs=53.6
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhcc--CceEEEEEecCCcc---------------------cccchhhhhCC
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFK--GKLIFVYVQMDNED---------------------VGKPVSEYFGI 222 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~--~~i~f~~vd~~~~~---------------------~~~~l~~~~~i 222 (432)
.++++++.|+++| +.|+...+.+.++++++. +.+.++.++++... ....+++.||+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGV 106 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTC
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCC
Confidence 4557788899999 899999999999999998 46888888877521 02467889999
Q ss_pred CCCCCcEEEEEe
Q 013976 223 TGEAPKVLAYTG 234 (432)
Q Consensus 223 ~~~~~P~i~i~~ 234 (432)
... |++++++
T Consensus 107 ~~~--Pt~~lid 116 (144)
T 1o73_A 107 ESI--PTLITIN 116 (144)
T ss_dssp CSS--SEEEEEE
T ss_pred CCC--CEEEEEE
Confidence 887 9999998
No 392
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=97.25 E-value=0.00024 Score=63.77 Aligned_cols=75 Identities=15% Similarity=0.099 Sum_probs=58.9
Q ss_pred cceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcc---cccchhhhhCCCCCCCcEEEEEeCCCCceecCCC
Q 013976 170 KNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNED---VGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDG 245 (432)
Q Consensus 170 ~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~---~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~ 245 (432)
..+++||++| ++|+.+.+.++++|+++. .+|++..+ .++++++.+|+++. |++.+ ++ +. +.|
T Consensus 199 ~~vV~F~A~WC~~Ck~l~p~le~lA~~l~------~Vd~d~~d~~~~~~~la~~~gI~~v--PT~~i--~G--~~--~~G 264 (291)
T 3kp9_A 199 IGGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAGITSY--PTWII--NG--RT--YTG 264 (291)
T ss_dssp TTCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCSSCSSSCCCHHHHTTTCCST--TEEEE--TT--EE--EES
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHcC------EEEEeecCchhhHHHHHHHcCCccc--CeEEE--CC--EE--ecC
Confidence 3478999999 999999999999998763 45665211 16789999999998 99755 33 33 689
Q ss_pred CCCHHHHHHHHHH
Q 013976 246 ELTLDKIKTFGED 258 (432)
Q Consensus 246 ~~~~~~i~~fi~~ 258 (432)
..+.+++.+|+.-
T Consensus 265 ~~~~~~L~~~l~~ 277 (291)
T 3kp9_A 265 VRSLEALAVASGY 277 (291)
T ss_dssp CCCHHHHHHHTCC
T ss_pred CCCHHHHHHHHCC
Confidence 9999999999864
No 393
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.21 E-value=0.00045 Score=58.57 Aligned_cols=43 Identities=30% Similarity=0.463 Sum_probs=39.0
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCC
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 340 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~ 340 (432)
+.+.+|+.|+++||++|+.+.+.+.++.+.+.+ ++.|..+++.
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ--DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT--TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC--CeEEEEEecc
Confidence 457899999999999999999999999999887 6999999986
No 394
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.20 E-value=0.00082 Score=56.88 Aligned_cols=41 Identities=29% Similarity=0.514 Sum_probs=35.6
Q ss_pred CCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeC
Q 013976 297 SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDG 339 (432)
Q Consensus 297 ~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~ 339 (432)
.+.+|+.|+.+||++|..+.+.+.++.+.+.. ++.|..+.+
T Consensus 22 ~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p~ 62 (195)
T 2znm_A 22 GKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS--DAYLRTEHV 62 (195)
T ss_dssp SSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT--TEEEEEEEC
T ss_pred CCcEEEEEECCCChhHHHHhHHHHHHHHHCCC--ceEEEEecc
Confidence 46789999999999999999999999998876 677777765
No 395
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=97.19 E-value=0.00087 Score=53.37 Aligned_cols=85 Identities=11% Similarity=0.078 Sum_probs=61.8
Q ss_pred CCcceEEEEEeC-cchhhhHHHHHH---HHHhccC-ceEEEEEecCCcccc---------------------cchhhhhC
Q 013976 168 PIKNQLLLFAVS-NDSEKLLPVFEE---AAKSFKG-KLIFVYVQMDNEDVG---------------------KPVSEYFG 221 (432)
Q Consensus 168 ~~~~~i~~~~~~-~~~~~~~~~~~~---~a~~~~~-~i~f~~vd~~~~~~~---------------------~~l~~~~~ 221 (432)
++++++.||++| ++|+...+.+.+ +.+++++ .+.++.++.+..... ..+.+.|+
T Consensus 31 gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (142)
T 3eur_A 31 AEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYD 110 (142)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSC
T ss_pred CCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhcC
Confidence 457788899999 899999999999 9999964 588888887763100 01356778
Q ss_pred CCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHH
Q 013976 222 ITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGE 257 (432)
Q Consensus 222 i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~ 257 (432)
+... |++++++.++...+. ..+.+.|.+|++
T Consensus 111 v~~~--P~~~lid~~G~i~~~---~~~~~~l~~~l~ 141 (142)
T 3eur_A 111 LRAI--PTLYLLDKNKTVLLK---DATLQKVEQYLA 141 (142)
T ss_dssp CTTC--SEEEEECTTCBEEEE---EECHHHHHHHHH
T ss_pred CCcC--CeEEEECCCCcEEec---CCCHHHHHHHHh
Confidence 8776 999888765533332 246788888875
No 396
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=97.19 E-value=0.00019 Score=58.56 Aligned_cols=90 Identities=13% Similarity=0.183 Sum_probs=53.4
Q ss_pred CCCcEEEEEe-CCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc-----------------------ccCCCC-
Q 013976 296 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH-----------------------HRAKSD- 350 (432)
Q Consensus 296 ~~~~~lv~f~-~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~-----------------------~~~~i~- 350 (432)
.++.++|.|| ++||++|....|.+.++...++.. ++.++.|+.+.... ..|++.
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~-~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v~~~ygv~~ 107 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQV-NAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVVKKYNVAW 107 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGGGGC-SSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCEE
T ss_pred CCCeEEEEecCCCCCCccccchhhccccccccccc-CceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHHHHHcCCcc
Confidence 3578888888 999999999999999988888764 67777777664221 112331
Q ss_pred ----------CCceEEEE-eCCCcccCce--eccCCCCHHHHHHHHHhc
Q 013976 351 ----------GFPTILFF-PAGNKSFDPI--NVDVDRTVVALYKFLKKN 386 (432)
Q Consensus 351 ----------~~P~i~~~-~~g~~~~~~~--~y~g~~~~~~l~~fi~~~ 386 (432)
..|+.+++ ++|......+ ...+..+.+.+.+.|+..
T Consensus 108 ~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~L 156 (157)
T 4g2e_A 108 EFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKSL 156 (157)
T ss_dssp ECTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHHT
T ss_pred ccccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHh
Confidence 35777777 4454321001 123456788899888764
No 397
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=97.18 E-value=0.0012 Score=55.64 Aligned_cols=93 Identities=12% Similarity=0.022 Sum_probs=67.7
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCc-eEEEEEecCC--------cccccchh-hh----------------
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDN--------EDVGKPVS-EY---------------- 219 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~-i~f~~vd~~~--------~~~~~~l~-~~---------------- 219 (432)
.++++++.|+++| +.|....+.+.+++++|.++ +.++.|+++. .+....++ +.
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~ 126 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 126 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCcc
Confidence 4567788899999 99999999999999999875 8888888762 00011222 22
Q ss_pred -------------hCCCCCCCc------EEEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 220 -------------FGITGEAPK------VLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 220 -------------~~i~~~~~P------~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
+|+.+. | +.++++.++...+.+.|..+.+.+.+.|...+.
T Consensus 127 ~~~~~~~~l~~~~~~v~~~--P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 185 (190)
T 2vup_A 127 NAHPLYEYMKKTKPGILKT--KAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPLLE 185 (190)
T ss_dssp TBCHHHHHHHHHSCCGGGC--CSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCcCCC--ccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHh
Confidence 244333 6 677777666566677888899999999999876
No 398
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=97.18 E-value=0.00048 Score=56.61 Aligned_cols=42 Identities=21% Similarity=0.347 Sum_probs=36.4
Q ss_pred CCcEEEEEe-CCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCC
Q 013976 297 SKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 341 (432)
Q Consensus 297 ~~~~lv~f~-~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~ 341 (432)
++++||.|| +.||.+|....+.+.++...+ . ++.++.|+++.
T Consensus 43 gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~--~v~vv~Is~d~ 85 (165)
T 1q98_A 43 SKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-S--NTIVLCISADL 85 (165)
T ss_dssp TSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-T--TEEEEEEESSC
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHc-C--CCEEEEEeCCC
Confidence 578999998 899999999999999999998 3 68888888764
No 399
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=97.14 E-value=0.0029 Score=53.09 Aligned_cols=96 Identities=13% Similarity=0.037 Sum_probs=65.8
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCc-eEEEEEecCC--------cccccchhh-hh---------------
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDN--------EDVGKPVSE-YF--------------- 220 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~-i~f~~vd~~~--------~~~~~~l~~-~~--------------- 220 (432)
.+++++|.|+++| +.|....+.+.+++++|+++ +.++.|.++. .+....+++ .|
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 124 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSCC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCCc
Confidence 4567788899999 88999999999999999875 8888887652 000011111 11
Q ss_pred --------------CCCCC-CCc---EEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcC
Q 013976 221 --------------GITGE-APK---VLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 262 (432)
Q Consensus 221 --------------~i~~~-~~P---~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g 262 (432)
++.+. ..| +.++++.++...+.+.|..+.+.|.+.|+..+++
T Consensus 125 ~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL~~ 184 (187)
T 3dwv_A 125 NAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIPLLGS 184 (187)
T ss_dssp -CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHC--
T ss_pred chhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCCCCHHHHHHHHHHHHhc
Confidence 11111 235 7778877666667778889999999999998864
No 400
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=97.13 E-value=0.0012 Score=55.93 Aligned_cols=95 Identities=11% Similarity=0.156 Sum_probs=69.8
Q ss_pred CCcceEEEE-EeC-cchhhhHHHHHHHHHhccC-ceEEEEEecCCcc----------------------cccchhhhhCC
Q 013976 168 PIKNQLLLF-AVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNED----------------------VGKPVSEYFGI 222 (432)
Q Consensus 168 ~~~~~i~~~-~~~-~~~~~~~~~~~~~a~~~~~-~i~f~~vd~~~~~----------------------~~~~l~~~~~i 222 (432)
+++++|.|| +.| +.|....+.+.+++.+|.+ .+.|+.|..+..+ ....+.+.||+
T Consensus 45 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 124 (195)
T 2bmx_A 45 GKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGV 124 (195)
T ss_dssp TCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTC
T ss_pred CCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhCC
Confidence 456778888 889 9999999999999999986 4888888776310 03456788998
Q ss_pred C-----CCCCcEEEEEeCCCCceecCCCC----CCHHHHHHHHHHHhcCCc
Q 013976 223 T-----GEAPKVLAYTGNDDAKKHILDGE----LTLDKIKTFGEDFLEGKL 264 (432)
Q Consensus 223 ~-----~~~~P~i~i~~~~~~~~y~~~~~----~~~~~i~~fi~~~~~g~l 264 (432)
. .. |++++++.+....+.+.|. .+.+.|.+.++.+..|..
T Consensus 125 ~~~~g~~~--P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~~~~ 173 (195)
T 2bmx_A 125 LNADGVAD--RVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQSDEL 173 (195)
T ss_dssp BCTTSSBC--EEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC---
T ss_pred cccCCCcc--ceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhhCCC
Confidence 7 54 9998887665445554443 378999999999887544
No 401
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=97.13 E-value=0.0027 Score=52.44 Aligned_cols=45 Identities=13% Similarity=0.189 Sum_probs=36.3
Q ss_pred CCCcEEEEEeCCCCh-hhhhhHHHHHHHHHHhcCC-CCEEEEEEeCC
Q 013976 296 ESKDVLLEIYAPWCG-HCQAFEPTYNKLAKHLRGV-DSIVIAKMDGT 340 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~-~c~~~~~~~~~la~~~~~~-~~~~~~~id~~ 340 (432)
.++.+||.||.+||. .|....+.+.++.+.++.. .++.++.|.++
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvD 77 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVD 77 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecC
Confidence 468999999999995 7999999999988888642 35777777665
No 402
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.10 E-value=0.00036 Score=51.08 Aligned_cols=54 Identities=17% Similarity=0.328 Sum_probs=40.3
Q ss_pred EEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--c----cCCCCCCceEEEEeCCCc
Q 013976 300 VLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--H----RAKSDGFPTILFFPAGNK 363 (432)
Q Consensus 300 ~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~----~~~i~~~P~i~~~~~g~~ 363 (432)
.+++|+++||++|+.+.+.+.+. ++.+..+|++.+.. . .+++.++|++ |.+|..
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~--------~i~~~~~di~~~~~~~~~l~~~~~~~~vP~l--~~~g~~ 66 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK--------GAEFNEIDASATPELRAEMQERSGRNTFPQI--FIGSVH 66 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT--------TCCCEEEESTTSHHHHHHHHHHHTSSCCCEE--EETTEE
T ss_pred cEEEEECCCChhHHHHHHHHHHc--------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEE--EECCEE
Confidence 47789999999999998888775 36677788876543 2 4688899975 446643
No 403
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=97.07 E-value=0.0013 Score=53.97 Aligned_cols=95 Identities=12% Similarity=0.048 Sum_probs=67.6
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCc-eEEEEEecCC--------cccccchhh-hh---------------
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDN--------EDVGKPVSE-YF--------------- 220 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~-i~f~~vd~~~--------~~~~~~l~~-~~--------------- 220 (432)
.++++++.|+++| +.|....+.+.+++.+|.++ +.++.|+++. .+....+++ .+
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNGE 110 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCCC
Confidence 4567788899999 99999999999999999875 8899888752 000122223 32
Q ss_pred --------------CCCCCCCc---EEEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 221 --------------GITGEAPK---VLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 221 --------------~i~~~~~P---~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
|+.....| +.++++.++...+.+.|..+.+.|.+.|+..++
T Consensus 111 ~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 111 NASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp TBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHTT
T ss_pred chHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHHhh
Confidence 22112246 777777666566677888899999999998775
No 404
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.04 E-value=0.00033 Score=52.79 Aligned_cols=53 Identities=13% Similarity=0.276 Sum_probs=39.3
Q ss_pred EEEEeC-----CCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc------ccCCCCCCceEEEEeCCCc
Q 013976 301 LLEIYA-----PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH------HRAKSDGFPTILFFPAGNK 363 (432)
Q Consensus 301 lv~f~~-----~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~------~~~~i~~~P~i~~~~~g~~ 363 (432)
+++|++ +||++|+.+.+.|.++ ++.+..+|++.++. ...+..++|++ |.+|..
T Consensus 19 vvvf~~g~~~~~~C~~C~~~~~~L~~~--------~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v--~i~g~~ 82 (105)
T 2yan_A 19 VMLFMKGNKQEAKCGFSKQILEILNST--------GVEYETFDILEDEEVRQGLKAYSNWPTYPQL--YVKGEL 82 (105)
T ss_dssp EEEEESBCSSSBCTTHHHHHHHHHHHH--------TCCCEEEEGGGCHHHHHHHHHHHTCCSSCEE--EETTEE
T ss_pred EEEEEecCCCCCCCccHHHHHHHHHHC--------CCCeEEEECCCCHHHHHHHHHHHCCCCCCeE--EECCEE
Confidence 444777 9999999999999887 36677888877644 12578899998 446643
No 405
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.04 E-value=9.4e-05 Score=56.71 Aligned_cols=53 Identities=13% Similarity=0.395 Sum_probs=37.6
Q ss_pred EEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCc----cc------ccCCCCCCceEEEEeCCCc
Q 013976 301 LLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTN----EH------HRAKSDGFPTILFFPAGNK 363 (432)
Q Consensus 301 lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~----~~------~~~~i~~~P~i~~~~~g~~ 363 (432)
+++|+++||++|+.+.+.|.++ ++.+..+|++.. .. ...+..++|++ |.+|+.
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~~--------~i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~i--fi~g~~ 83 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKRL--------GVQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNV--FVCGKH 83 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT--------TCCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEE--EETTEE
T ss_pred EEEEECCCChhHHHHHHHHHHc--------CCCCeEEEeecCCCChHHHHHHHHHHhCCCCcCEE--EECCEE
Confidence 7779999999999999988875 344455666552 11 12478899998 556654
No 406
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=97.00 E-value=0.00079 Score=56.96 Aligned_cols=44 Identities=25% Similarity=0.479 Sum_probs=38.9
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCC
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 341 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~ 341 (432)
+.+.+||.|++.||++|..+.|.+.++.+.+.+ ++.|..+++.-
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~--~v~~~~~p~~~ 66 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD--DMYLRTEHVVW 66 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT--TEEEEEEECCC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC--CeEEEEecCCC
Confidence 357799999999999999999999999988877 69999998763
No 407
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=96.99 E-value=0.00082 Score=57.77 Aligned_cols=87 Identities=8% Similarity=0.064 Sum_probs=63.0
Q ss_pred CCcEEEEEe-CCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc------------------------------c
Q 013976 297 SKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH------------------------------H 345 (432)
Q Consensus 297 ~~~~lv~f~-~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~------------------------------~ 345 (432)
++++||+|| ++||.+|....+.|.++...|+.. ++.++.|+++.... .
T Consensus 48 Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~-~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 126 (211)
T 2pn8_A 48 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI-NTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 126 (211)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHH
Confidence 578999999 999999999999999999999763 68888887764210 1
Q ss_pred cCCCC------CCceEEEEe-CCCcccCceeccC----CCCHHHHHHHHHhcC
Q 013976 346 RAKSD------GFPTILFFP-AGNKSFDPINVDV----DRTVVALYKFLKKNA 387 (432)
Q Consensus 346 ~~~i~------~~P~i~~~~-~g~~~~~~~~y~g----~~~~~~l~~fi~~~~ 387 (432)
.|++. ..|+.+++. +|..+. .+.| ..+.+.+++.|+...
T Consensus 127 ~ygv~~~~~g~~~p~~~lID~~G~I~~---~~~g~~~~~~~~~ell~~l~~l~ 176 (211)
T 2pn8_A 127 DYGVYLEDSGHTLRGLFIIDDKGILRQ---ITLNDLPVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEE---EEEECTTBCCCHHHHHHHHHHHH
T ss_pred HcCCcccCCCcccceEEEECCCCEEEE---EEecCCCCCCCHHHHHHHHHHhh
Confidence 23452 589999994 554432 2222 357888888888754
No 408
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=96.99 E-value=0.0017 Score=51.73 Aligned_cols=87 Identities=10% Similarity=0.108 Sum_probs=62.9
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccC-ceEEEEEecCCcc-------------c----------ccchhhhhC
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNED-------------V----------GKPVSEYFG 221 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~-~i~f~~vd~~~~~-------------~----------~~~l~~~~~ 221 (432)
.++++++.||++| +.|....+.+.+++++|.+ .+.|+.|+.+... + ...+.+.||
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYD 110 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcC
Confidence 4557788899999 8899999999999999985 4888888776421 0 134667888
Q ss_pred CCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHH
Q 013976 222 ITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGED 258 (432)
Q Consensus 222 i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~ 258 (432)
+... |+.++++.++...+. ..+.+.+.+++++
T Consensus 111 v~~~--P~~~lid~~G~i~~~---~~~~~~l~~~l~~ 142 (143)
T 4fo5_A 111 LRKG--FKNFLINDEGVIIAA---NVTPEKLTEILKA 142 (143)
T ss_dssp GGGC--CCEEEECTTSBEEEE---SCCHHHHHHHHTC
T ss_pred CCCC--CcEEEECCCCEEEEc---cCCHHHHHHHHHh
Confidence 8877 988888755433333 2467778777754
No 409
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=96.99 E-value=0.00077 Score=55.55 Aligned_cols=45 Identities=20% Similarity=0.234 Sum_probs=36.0
Q ss_pred CCCcEEEEEe-CCCChhhhh-hHHHHHHHHHHhcCCCCE-EEEEEeCCC
Q 013976 296 ESKDVLLEIY-APWCGHCQA-FEPTYNKLAKHLRGVDSI-VIAKMDGTT 341 (432)
Q Consensus 296 ~~~~~lv~f~-~~~c~~c~~-~~~~~~~la~~~~~~~~~-~~~~id~~~ 341 (432)
.++.++|+|| +.||+.|.. ..|.|.++...+++. ++ .++.|+.+.
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~-gv~~vv~Is~d~ 77 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGK-GVDIIACMAVND 77 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHT-TCCEEEEEESSC
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEeCCC
Confidence 3567777775 999999999 899999999998753 67 788887654
No 410
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=96.98 E-value=0.00075 Score=55.29 Aligned_cols=45 Identities=18% Similarity=0.259 Sum_probs=36.2
Q ss_pred CCCcEEEEEe-CCCChhhh-hhHHHHHHHHHHhcCCCCEE-EEEEeCCC
Q 013976 296 ESKDVLLEIY-APWCGHCQ-AFEPTYNKLAKHLRGVDSIV-IAKMDGTT 341 (432)
Q Consensus 296 ~~~~~lv~f~-~~~c~~c~-~~~~~~~~la~~~~~~~~~~-~~~id~~~ 341 (432)
.++.++|+|| +.||..|. ...|.|.++...+++. ++. ++.|+.+.
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~-~v~~vv~Is~d~ 81 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSK-GVTEILCISVND 81 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHT-TCCCEEEEESSC
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEECCC
Confidence 4578999999 89999999 8999999999998743 566 66666553
No 411
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=96.96 E-value=0.00069 Score=56.00 Aligned_cols=42 Identities=5% Similarity=0.048 Sum_probs=35.4
Q ss_pred CCcEEEEEe-CCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCC
Q 013976 297 SKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 341 (432)
Q Consensus 297 ~~~~lv~f~-~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~ 341 (432)
+++++|.|| +.||..|....+.+.++...+ . ++.++.|.++.
T Consensus 47 gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~--~v~vv~Is~d~ 89 (171)
T 2yzh_A 47 DVVQVIITVPSLDTPVCETETKKFNEIMAGM-E--GVDVTVVSMDL 89 (171)
T ss_dssp SSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T--TEEEEEEESSC
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHc-C--CceEEEEeCCC
Confidence 578999998 899999999999999998888 3 67888877654
No 412
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=96.95 E-value=0.00038 Score=57.67 Aligned_cols=43 Identities=14% Similarity=0.305 Sum_probs=35.1
Q ss_pred CcEEEEEeCCCChhhhhh-HHHHHHHHHHhcCCCCEE-EEEEeCCC
Q 013976 298 KDVLLEIYAPWCGHCQAF-EPTYNKLAKHLRGVDSIV-IAKMDGTT 341 (432)
Q Consensus 298 ~~~lv~f~~~~c~~c~~~-~~~~~~la~~~~~~~~~~-~~~id~~~ 341 (432)
+.+|++||+.||.+|..- .|.|.++...++.. ++. ++-|+.+.
T Consensus 45 ~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~-g~~~vv~Is~d~ 89 (171)
T 2pwj_A 45 KVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAK-GVDSVICVAIND 89 (171)
T ss_dssp EEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHT-TCSEEEEEESSC
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEeCCC
Confidence 467788999999999997 99999999998753 566 77777654
No 413
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=96.95 E-value=0.0038 Score=51.08 Aligned_cols=96 Identities=13% Similarity=0.015 Sum_probs=67.3
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCc-eEEEEEecCCc--------ccccch-hhhh---------------
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNE--------DVGKPV-SEYF--------------- 220 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~-i~f~~vd~~~~--------~~~~~l-~~~~--------------- 220 (432)
.++.+++.|+++| +.|....+.+.+++.+|.++ +.++.|+++.. +....+ .+.+
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 109 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNGS 109 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCSST
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeecCc
Confidence 4567788899999 99999999999999999874 88888887531 001122 1222
Q ss_pred --------------CCCCC---CCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcC
Q 013976 221 --------------GITGE---APKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEG 262 (432)
Q Consensus 221 --------------~i~~~---~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g 262 (432)
|+.+. ..|+.++++.++...+.+.|..+.+.|.+.|+..+.+
T Consensus 110 ~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 168 (169)
T 2v1m_A 110 DADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIMELLEK 168 (169)
T ss_dssp TSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHHHC
T ss_pred cccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHHHHHhcc
Confidence 22211 1267777776666666778888899999999988764
No 414
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=96.90 E-value=0.0011 Score=58.34 Aligned_cols=45 Identities=20% Similarity=0.361 Sum_probs=37.6
Q ss_pred CCCcEEEEEe-CCCChhhh-hhHHHHHHHHHHhcCCCCE-EEEEEeCCC
Q 013976 296 ESKDVLLEIY-APWCGHCQ-AFEPTYNKLAKHLRGVDSI-VIAKMDGTT 341 (432)
Q Consensus 296 ~~~~~lv~f~-~~~c~~c~-~~~~~~~~la~~~~~~~~~-~~~~id~~~ 341 (432)
.++.++|+|| +.||.+|. ...|.|.+++..+++. ++ .++.|+.+.
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~-~~~~vv~is~d~ 79 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKY-GVDDILVVSVND 79 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHT-TCCEEEEEESSC
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEEcCC
Confidence 4578899998 99999999 8999999999999753 67 777777654
No 415
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=95.95 E-value=0.00015 Score=59.26 Aligned_cols=97 Identities=8% Similarity=-0.000 Sum_probs=63.5
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHH-HHHhcc--CceEEEEEecCCcc-cccchhh------------------hhCCC
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEE-AAKSFK--GKLIFVYVQMDNED-VGKPVSE------------------YFGIT 223 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~-~a~~~~--~~i~f~~vd~~~~~-~~~~l~~------------------~~~i~ 223 (432)
.++++++.|+++| +.|....+.+.+ ++.++. ..+.++.|+++... ....+++ .||+.
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 3557788899999 899999999998 888887 45888888776531 1122222 23322
Q ss_pred CCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcCCc
Q 013976 224 GEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGKL 264 (432)
Q Consensus 224 ~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g~l 264 (432)
....|++++++.++...+.+.| .+.+.+.++++.+..+.-
T Consensus 112 ~~~~P~~~lid~~G~i~~~~~g-~~~~~l~~~l~~l~~~~~ 151 (159)
T 2ls5_A 112 DAGITRNVLIDREGKIVKLTRL-YNEEEFASLVQQINEMLK 151 (159)
Confidence 2224888888665544444555 567778888877665443
No 416
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=96.90 E-value=0.0015 Score=53.82 Aligned_cols=92 Identities=11% Similarity=0.115 Sum_probs=66.2
Q ss_pred CCCcceEEEEEeC-cc-hhhhHHHHHHHHHhccC----ceEEEEEecCCcccc-------------------------cc
Q 013976 167 SPIKNQLLLFAVS-ND-SEKLLPVFEEAAKSFKG----KLIFVYVQMDNEDVG-------------------------KP 215 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~-~~~~~~~~~~~a~~~~~----~i~f~~vd~~~~~~~-------------------------~~ 215 (432)
.++++++.|++.| ++ |....+.+.+++.++.+ .+.|+.|+++..... ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 3557788888999 76 99999999999999984 589999987642101 24
Q ss_pred hhhhhCCCC-------------CCCcEEEEEeCCCCceecCCCCC--CHHHHHHHHHHH
Q 013976 216 VSEYFGITG-------------EAPKVLAYTGNDDAKKHILDGEL--TLDKIKTFGEDF 259 (432)
Q Consensus 216 l~~~~~i~~-------------~~~P~i~i~~~~~~~~y~~~~~~--~~~~i~~fi~~~ 259 (432)
+++.||+.. ...|++++++ +....+.+.|.. +.+.|.+.|+.+
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECHHHHTCHHHHHHHHHHC
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECCCCCCCHHHHHHHHHHh
Confidence 556666521 1348888888 654556667766 888999888764
No 417
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=96.89 E-value=0.0027 Score=51.73 Aligned_cols=92 Identities=13% Similarity=0.227 Sum_probs=64.2
Q ss_pred CCc-ceEEEE-EeC-cchhhhHHHHHHHHHhccCc-eEEEEEecCCcc------------------cccchhhhhCCCC-
Q 013976 168 PIK-NQLLLF-AVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNED------------------VGKPVSEYFGITG- 224 (432)
Q Consensus 168 ~~~-~~i~~~-~~~-~~~~~~~~~~~~~a~~~~~~-i~f~~vd~~~~~------------------~~~~l~~~~~i~~- 224 (432)
++. .++.|| +.| +.|....+.+.+++.+|+++ +.|+.|..+..+ ....+.+.||+.+
T Consensus 28 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 107 (161)
T 3drn_A 28 GKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKGF 107 (161)
T ss_dssp TTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCCS
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCCc
Confidence 444 677788 888 89999999999999999864 888888776210 1357788899986
Q ss_pred -CCCcEEEEEeCCCCceecCCCCC----CHHHHHHHHHHH
Q 013976 225 -EAPKVLAYTGNDDAKKHILDGEL----TLDKIKTFGEDF 259 (432)
Q Consensus 225 -~~~P~i~i~~~~~~~~y~~~~~~----~~~~i~~fi~~~ 259 (432)
...|+.++++.++...+.+.|.. +.+.+.+.++..
T Consensus 108 ~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~~l 147 (161)
T 3drn_A 108 ILPARITFVIDKKGIIRHIYNSQMNPANHVNEALKALKQI 147 (161)
T ss_dssp SSCCCEEEEECTTSBEEEEEECSSCTTHHHHHHHHHHHHH
T ss_pred CcccceEEEECCCCEEEEEEecCCCCCcCHHHHHHHHHHh
Confidence 12498888877665555555522 344555555554
No 418
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.83 E-value=0.0013 Score=49.04 Aligned_cols=79 Identities=10% Similarity=0.037 Sum_probs=57.4
Q ss_pred cceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEEEEeCCCCceecCCCCCC
Q 013976 170 KNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELT 248 (432)
Q Consensus 170 ~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~~~ 248 (432)
+.+++|+++| +.|+.+.+.+.+++.. +.|..+|.++.+ .+.+...+| ... |+++ . ++ +.. ..+.++
T Consensus 17 ~~v~~f~~~~C~~C~~~~~~L~~l~~~----i~~~~vdi~~~~-~~el~~~~g-~~v--P~l~-~-~g--~~~-~~~g~~ 83 (100)
T 1wjk_A 17 PVLTLFTKAPCPLCDEAKEVLQPYKDR----FILQEVDITLPE-NSTWYERYK-FDI--PVFH-L-NG--QFL-MMHRVN 83 (100)
T ss_dssp CEEEEEECSSCHHHHHHHHHTSTTSSS----SEEEEEETTSST-THHHHHHSS-SSC--SEEE-E-SS--SEE-EESSCC
T ss_pred CEEEEEeCCCCcchHHHHHHHHHhhhC----CeEEEEECCCcc-hHHHHHHHC-CCC--CEEE-E-CC--EEE-EecCCC
Confidence 4567777888 8999999888876543 899999998322 568888999 665 9874 3 22 222 235589
Q ss_pred HHHHHHHHHHHhc
Q 013976 249 LDKIKTFGEDFLE 261 (432)
Q Consensus 249 ~~~i~~fi~~~~~ 261 (432)
.+.|.++++.++.
T Consensus 84 ~~~l~~~l~~~~~ 96 (100)
T 1wjk_A 84 TSKLEKQLRKLSG 96 (100)
T ss_dssp HHHHHHHHHSSSC
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987653
No 419
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=96.82 E-value=0.0013 Score=55.98 Aligned_cols=43 Identities=26% Similarity=0.367 Sum_probs=36.6
Q ss_pred CCCcEEEEEe-CCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCC
Q 013976 296 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 341 (432)
Q Consensus 296 ~~~~~lv~f~-~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~ 341 (432)
.++.++|.|| +.||..|....+.+.++...+ . ++.++.|.++.
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~--~v~vv~Is~D~ 120 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-E--NTVVLCISSDL 120 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-T--TEEEEEEESSC
T ss_pred CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-C--CCEEEEEECCC
Confidence 3578899998 789999999999999999998 3 68888888764
No 420
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=96.77 E-value=0.0016 Score=54.67 Aligned_cols=88 Identities=8% Similarity=-0.021 Sum_probs=62.6
Q ss_pred CCcEEEEEeC-CCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc---------------------------ccCC
Q 013976 297 SKDVLLEIYA-PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH---------------------------HRAK 348 (432)
Q Consensus 297 ~~~~lv~f~~-~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~---------------------------~~~~ 348 (432)
++++||+||+ .||..|....|.|.++...|++. ++.++.|.++.... ..|+
T Consensus 30 Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~-~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~yg 108 (186)
T 1n8j_A 30 GRWSVFFFYPADFTFVSPTELGDVADHYEELQKL-GVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFD 108 (186)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHT-TEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTT
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhC
Confidence 5789999995 99999999999999999999753 68888887663211 1234
Q ss_pred CC------CCceEEEEe-CCCcccCceeccC----CCCHHHHHHHHHhcCC
Q 013976 349 SD------GFPTILFFP-AGNKSFDPINVDV----DRTVVALYKFLKKNAS 388 (432)
Q Consensus 349 i~------~~P~i~~~~-~g~~~~~~~~y~g----~~~~~~l~~fi~~~~~ 388 (432)
+. ..|+.+++. +|..+. .+.| ..+.+.|.+.|+....
T Consensus 109 v~~~~~g~~~p~~~lID~~G~i~~---~~~~~~~~~~~~~~l~~~l~~l~~ 156 (186)
T 1n8j_A 109 NMREDEGLADRATFVVDPQGIIQA---IEVTAEGIGRDASDLLRKIKAAQY 156 (186)
T ss_dssp CEETTTTEECEEEEEECTTSBEEE---EEEECTTBCCCHHHHHHHHHHHHH
T ss_pred CccCCCCceeeEEEEECCCCeEEE---EEecCCCCCCCHHHHHHHHHHHHH
Confidence 43 369999994 554432 3333 2368888888887653
No 421
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=96.72 E-value=0.0022 Score=46.24 Aligned_cols=72 Identities=10% Similarity=0.041 Sum_probs=46.5
Q ss_pred EEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc-----c-ccCCC-----CCCceEEEEeCCCcccCce
Q 013976 300 VLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-----H-HRAKS-----DGFPTILFFPAGNKSFDPI 368 (432)
Q Consensus 300 ~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~-----~-~~~~i-----~~~P~i~~~~~g~~~~~~~ 368 (432)
.+++|+++||++|+.+...+.++. - .+.+..+|...+. . ...+. .++|++.+ +|..+
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~~~----i--~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i--~g~~i---- 72 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEENN----I--AFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI--DDEHI---- 72 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTT----C--CCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE--TTEEE----
T ss_pred EEEEEEcCCChhHHHHHHHHHHcC----C--CceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE--CCEEE----
Confidence 478899999999999988887652 1 3455555554431 1 23455 89999854 55332
Q ss_pred eccCCCCHHHHHHHHHhcCC
Q 013976 369 NVDVDRTVVALYKFLKKNAS 388 (432)
Q Consensus 369 ~y~g~~~~~~l~~fi~~~~~ 388 (432)
| ....+.+++++...
T Consensus 73 ---~--g~~~i~~~~~~~~~ 87 (89)
T 3msz_A 73 ---G--GFTELKANADKILN 87 (89)
T ss_dssp ---E--SHHHHHHTHHHHTT
T ss_pred ---e--ChHHHHHHHHHHhc
Confidence 2 45667777766543
No 422
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=96.70 E-value=0.0026 Score=53.05 Aligned_cols=94 Identities=4% Similarity=0.066 Sum_probs=64.9
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCc-eEEEEEecCCc--------ccccchhhh-hCCC----------C-
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNE--------DVGKPVSEY-FGIT----------G- 224 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~-i~f~~vd~~~~--------~~~~~l~~~-~~i~----------~- 224 (432)
.++.+++.|+++| +.|....+.+.+++++|.++ +.++.|+++.. +....+++. +++. +
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g~ 127 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGT 127 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCCc
Confidence 4557788899999 99999999999999999875 88888887531 001223333 3321 0
Q ss_pred ----------CCCc-------EEEEEeCCCCceecCCCCCCHHHHHHHHHHHh
Q 013976 225 ----------EAPK-------VLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 260 (432)
Q Consensus 225 ----------~~~P-------~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~ 260 (432)
...| +.++++.++...+.+.|..+.+.|.+.|+..+
T Consensus 128 ~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 128 GAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp TSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHTTC
T ss_pred cchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHHHHHh
Confidence 0236 56677666555666778888999998888754
No 423
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=96.66 E-value=0.0016 Score=53.36 Aligned_cols=43 Identities=16% Similarity=0.230 Sum_probs=35.9
Q ss_pred CCCcEEEEEeC-CCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCC
Q 013976 296 ESKDVLLEIYA-PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 341 (432)
Q Consensus 296 ~~~~~lv~f~~-~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~ 341 (432)
.++++||.||+ .||.+|....+.+.++...+ . ++.++.|+++.
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~--~v~vv~is~d~ 84 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-D--NTVVLTVSMDL 84 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-T--TEEEEEEESSC
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-C--CcEEEEEECCC
Confidence 35789999995 99999999999999998888 3 68888887764
No 424
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=96.65 E-value=0.0025 Score=54.05 Aligned_cols=93 Identities=13% Similarity=0.176 Sum_probs=68.0
Q ss_pred CCCcceEEEE-EeC-cchhhhHHHHHHHHHhccC-ceEEEEEecCCcc-------------------------cccchhh
Q 013976 167 SPIKNQLLLF-AVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNED-------------------------VGKPVSE 218 (432)
Q Consensus 167 ~~~~~~i~~~-~~~-~~~~~~~~~~~~~a~~~~~-~i~f~~vd~~~~~-------------------------~~~~l~~ 218 (432)
.++++++.|| +.| +.|....+.+.+++.+|.+ .+.++.|+.+..+ ....+.+
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISR 111 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHH
Confidence 3556777788 888 9999999999999999975 4888888776310 0245778
Q ss_pred hhCCC-----CCCCcEEEEEeCCCCceecCCCC----CCHHHHHHHHHHHhc
Q 013976 219 YFGIT-----GEAPKVLAYTGNDDAKKHILDGE----LTLDKIKTFGEDFLE 261 (432)
Q Consensus 219 ~~~i~-----~~~~P~i~i~~~~~~~~y~~~~~----~~~~~i~~fi~~~~~ 261 (432)
.||+. .. |+.++++.++...+.+.|. .+.+.|.+.++....
T Consensus 112 ~~~v~~~~g~~~--P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 161 (198)
T 1zof_A 112 DYDVLFEEAIAL--RGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALLH 161 (198)
T ss_dssp HTTCEETTTEEC--EEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHHH
T ss_pred HhCCcccCCccc--ceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHHH
Confidence 88987 54 9888887765444544443 367889999988763
No 425
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=96.61 E-value=0.0076 Score=50.08 Aligned_cols=39 Identities=31% Similarity=0.575 Sum_probs=32.0
Q ss_pred CCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEE
Q 013976 297 SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKM 337 (432)
Q Consensus 297 ~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~i 337 (432)
.+++||.|..-.|++|+.+.+.+.++.+.+.+. +.+..+
T Consensus 21 ~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~--~~~~~~ 59 (184)
T 4dvc_A 21 SSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEG--AKFQKN 59 (184)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTT--CEEEEE
T ss_pred CCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCc--eEEEEE
Confidence 467899999999999999999999999888763 444443
No 426
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=96.60 E-value=0.0032 Score=52.72 Aligned_cols=95 Identities=11% Similarity=-0.039 Sum_probs=69.2
Q ss_pred CCCcceEEEE-EeC-cchhhhHHHHHHHHHhccC-ceEEEEEecCCcc----------------------cccchhhhhC
Q 013976 167 SPIKNQLLLF-AVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNED----------------------VGKPVSEYFG 221 (432)
Q Consensus 167 ~~~~~~i~~~-~~~-~~~~~~~~~~~~~a~~~~~-~i~f~~vd~~~~~----------------------~~~~l~~~~~ 221 (432)
.+++.++.|| +.| +.|....+.+.+++.+|.+ .+.++.|..+... ....+.+.||
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 109 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFD 109 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhC
Confidence 3456777788 899 9999999999999999985 4888888776410 0345778889
Q ss_pred CCC----CCCcEEEEEeCCCCceecCCCC----CCHHHHHHHHHHHhc
Q 013976 222 ITG----EAPKVLAYTGNDDAKKHILDGE----LTLDKIKTFGEDFLE 261 (432)
Q Consensus 222 i~~----~~~P~i~i~~~~~~~~y~~~~~----~~~~~i~~fi~~~~~ 261 (432)
+.. ...|++++++.++...+.+.|. .+.+.|.+.++.+..
T Consensus 110 v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 157 (187)
T 1we0_A 110 VLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQY 157 (187)
T ss_dssp CEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHHH
T ss_pred CCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 871 1349999997665445544443 378899999998775
No 427
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.60 E-value=0.0018 Score=48.98 Aligned_cols=64 Identities=11% Similarity=0.275 Sum_probs=43.6
Q ss_pred ccchhhhhcCCCcEEEEEeC-----CCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--c----cCCCCCCceE
Q 013976 287 NNFDEIVLDESKDVLLEIYA-----PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--H----RAKSDGFPTI 355 (432)
Q Consensus 287 ~~~~~~~~~~~~~~lv~f~~-----~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~----~~~i~~~P~i 355 (432)
+.+++.+ . ... +++|+. +||++|+.+...|.++ ++.+..+|++.++. . ..+..++|.|
T Consensus 6 ~~~~~~i-~-~~~-vvvy~~g~~~~~~Cp~C~~ak~~L~~~--------~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~i 74 (109)
T 1wik_A 6 SGLKVLT-N-KAS-VMLFMKGNKQEAKCGFSKQILEILNST--------GVEYETFDILEDEEVRQGLKTFSNWPTYPQL 74 (109)
T ss_dssp CCHHHHH-T-TSS-EEEEESSTTTCCCSSTHHHHHHHHHHT--------CSCEEEEESSSCHHHHHHHHHHHSCCSSCEE
T ss_pred HHHHHHh-c-cCC-EEEEEecCCCCCCCchHHHHHHHHHHc--------CCCeEEEECCCCHHHHHHHHHHhCCCCCCEE
Confidence 4455655 2 233 445666 9999999999888776 46788889887643 1 2467789974
Q ss_pred EEEeCCCc
Q 013976 356 LFFPAGNK 363 (432)
Q Consensus 356 ~~~~~g~~ 363 (432)
|.+|..
T Consensus 75 --fi~g~~ 80 (109)
T 1wik_A 75 --YVRGDL 80 (109)
T ss_dssp --ECSSSE
T ss_pred --EECCEE
Confidence 566654
No 428
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=96.60 E-value=0.00052 Score=56.41 Aligned_cols=93 Identities=11% Similarity=0.112 Sum_probs=60.3
Q ss_pred cCCCcEEEEEe-CCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc-----------------------ccCCCC
Q 013976 295 DESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH-----------------------HRAKSD 350 (432)
Q Consensus 295 ~~~~~~lv~f~-~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~-----------------------~~~~i~ 350 (432)
.+++++++.|| ++||++|....+.|.++...|++. ++.++.|+.+.... ..|++.
T Consensus 31 ~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~-~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~ 109 (164)
T 4gqc_A 31 KRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKA-NAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVIKLYNVY 109 (164)
T ss_dssp HTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGS-SSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCE
T ss_pred cCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhcc-CceEEEecCCCHHHHHHHHHhcCcccceeecCchHHHHHcCCc
Confidence 35678888877 999999999888898888888764 67777787664221 112331
Q ss_pred ----------CCceEEEE-eCCCcccCce--eccCCCCHHHHHHHHHhcCC
Q 013976 351 ----------GFPTILFF-PAGNKSFDPI--NVDVDRTVVALYKFLKKNAS 388 (432)
Q Consensus 351 ----------~~P~i~~~-~~g~~~~~~~--~y~g~~~~~~l~~fi~~~~~ 388 (432)
..|+.++. ++|......+ ...+..+.+.+++.|++.++
T Consensus 110 ~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l~~ 160 (164)
T 4gqc_A 110 HEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKIAG 160 (164)
T ss_dssp EEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHHHH
T ss_pred ccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHHhc
Confidence 36777777 4454321000 11234578888888877653
No 429
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=96.54 E-value=0.0046 Score=51.57 Aligned_cols=93 Identities=9% Similarity=-0.049 Sum_probs=62.5
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCc-eEEEEEecCCc--------ccccchhhhh----------------
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNE--------DVGKPVSEYF---------------- 220 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~-i~f~~vd~~~~--------~~~~~l~~~~---------------- 220 (432)
.++.+++.|+++| +.|....+.+.+++.+|.++ +.++.|+++.. +....+++.+
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~ 125 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDD 125 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSSTT
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCCcc
Confidence 4567788889999 99999999999999999864 88888876520 0011111222
Q ss_pred ---------------CCCC---CCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHH
Q 013976 221 ---------------GITG---EAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDF 259 (432)
Q Consensus 221 ---------------~i~~---~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~ 259 (432)
|+.+ ...|+.++++.+....+.+.|..+.+.|.+.|+.+
T Consensus 126 ~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 182 (183)
T 2obi_A 126 AHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 182 (183)
T ss_dssp SCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHHHTTSGGG
T ss_pred hhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHh
Confidence 2211 01378778876665666677888888887776654
No 430
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=96.53 E-value=0.01 Score=49.22 Aligned_cols=95 Identities=8% Similarity=0.039 Sum_probs=64.0
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCc-eEEEEEecCC--------cccccchhhh-hCCCCC----------
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDN--------EDVGKPVSEY-FGITGE---------- 225 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~-i~f~~vd~~~--------~~~~~~l~~~-~~i~~~---------- 225 (432)
.++.++|.|+++| +.|....+.+.+++++|+++ +.++.|.++. .+....+++. +++.-.
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 116 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGS 116 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCceeeeeeccCc
Confidence 4557778889999 99999999999999999875 8888887543 1112334454 544210
Q ss_pred --------------CCcE----EEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 226 --------------APKV----LAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 226 --------------~~P~----i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
..|. .++++.++...+.+.|..+.+.+.+.|..++.
T Consensus 117 ~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL~ 170 (180)
T 3kij_A 117 EGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALVR 170 (180)
T ss_dssp TCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHHHHHH
T ss_pred cccHHHHHHHhcCCCCccccceEEEECCCCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 1354 55666655556667787787777777766654
No 431
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=96.52 E-value=0.0035 Score=54.90 Aligned_cols=87 Identities=8% Similarity=0.083 Sum_probs=62.9
Q ss_pred CCCcEEEEEeC-CCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc------------------------------
Q 013976 296 ESKDVLLEIYA-PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH------------------------------ 344 (432)
Q Consensus 296 ~~~~~lv~f~~-~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~------------------------------ 344 (432)
.++.+||+||+ .||..|....+.|.++...|++. ++.++.|.++....
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~-gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~ 154 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAI-NTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQIS 154 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTT-TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHH
Confidence 35789999999 99999999999999999999864 68888888764221
Q ss_pred ccCCCC------CCceEEEE-eCCCcccCceeccC----CCCHHHHHHHHHhc
Q 013976 345 HRAKSD------GFPTILFF-PAGNKSFDPINVDV----DRTVVALYKFLKKN 386 (432)
Q Consensus 345 ~~~~i~------~~P~i~~~-~~g~~~~~~~~y~g----~~~~~~l~~fi~~~ 386 (432)
..|++. .+|+.+++ ++|..+. .+.+ ..+.+.+++.|+..
T Consensus 155 ~~ygv~~~~~g~~~p~~flID~~G~I~~---~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 155 KDYGVYLEDQGHTLRGLFIIDEKGVLRQ---ITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEE---EEEECTTBCCCHHHHHHHHHHH
T ss_pred HHhCCccccCCCccceEEEEcCCCeEEE---EEecCCCCCCCHHHHHHHHHHh
Confidence 123554 57999999 4554432 2222 56778888888764
No 432
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=96.51 E-value=0.0026 Score=53.27 Aligned_cols=44 Identities=18% Similarity=0.238 Sum_probs=34.6
Q ss_pred CC-cEEEEEeCCCChhhhh-hHHHHHHHHHHhcCCCCEE-EEEEeCCC
Q 013976 297 SK-DVLLEIYAPWCGHCQA-FEPTYNKLAKHLRGVDSIV-IAKMDGTT 341 (432)
Q Consensus 297 ~~-~~lv~f~~~~c~~c~~-~~~~~~~la~~~~~~~~~~-~~~id~~~ 341 (432)
++ .+|++||+.||..|.. -.|.|.+++..|+.. ++. ++-|+.+.
T Consensus 56 Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~-gv~~vv~Is~d~ 102 (184)
T 3uma_A 56 GKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILAR-GVDDIAVVAVND 102 (184)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTT-TCCEEEEEESSC
T ss_pred CCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHc-CCCEEEEEECCC
Confidence 45 4566677999999999 699999999999864 566 77777654
No 433
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=96.47 E-value=0.0015 Score=46.23 Aligned_cols=58 Identities=12% Similarity=0.087 Sum_probs=43.8
Q ss_pred ceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEEE
Q 013976 171 NQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAY 232 (432)
Q Consensus 171 ~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i 232 (432)
.+++|+++| +.|+.+.+.+++++.++...+.++.+|.+. . ...+++.+|+... |++++
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~-~-~~~~~~~~gv~~v--Pt~~i 61 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDK-A-RIAEAEKAGVKSV--PALVI 61 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCS-S-THHHHHHHTCCEE--EEEEE
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCCh-h-hHHHHHHcCCCcC--CEEEE
Confidence 367888999 999999999999988875555555555431 1 4577889999887 99976
No 434
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=96.43 E-value=0.01 Score=47.45 Aligned_cols=80 Identities=19% Similarity=0.333 Sum_probs=57.4
Q ss_pred CCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCC-----c----------------------------
Q 013976 296 ESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT-----N---------------------------- 342 (432)
Q Consensus 296 ~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~-----~---------------------------- 342 (432)
+.+.+|+.|..++|++|+.+.+.+.++ + ++.+...+.-. +
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l-----~--~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~ 85 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKM-----T--DVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFP 85 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTC-----C--SEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhc-----C--ceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCC
Confidence 457889999999999999999887654 2 35554433111 0
Q ss_pred --------cc-------ccCCCCCCceEEEEeCCCcccCceeccCCCCHHHHHHHHHhcCCC
Q 013976 343 --------EH-------HRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASI 389 (432)
Q Consensus 343 --------~~-------~~~~i~~~P~i~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~ 389 (432)
.. ..++|+++|++++ .+|. .+.|..+.+.|.++|.+....
T Consensus 86 ~~~~~~~~~v~~~~~la~~~gI~gtPt~vi-~nG~------~i~G~~~~~~l~~~i~~~~~~ 140 (147)
T 3gv1_A 86 VGGSICDNPVAETTSLGEQFGFNGTPTLVF-PNGR------TQSGYSPMPQLEEIIRKNQQE 140 (147)
T ss_dssp TTCCCCSCSHHHHHHHHHHTTCCSSCEEEC-TTSC------EEESCCCTTHHHHHHHHTSCC
T ss_pred CccHHHHHHHHHHHHHHHHhCCCccCEEEE-ECCE------EeeCCCCHHHHHHHHHHHHHh
Confidence 00 2459999999998 5554 467888999999999887653
No 435
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=96.40 E-value=0.0029 Score=48.31 Aligned_cols=53 Identities=9% Similarity=0.253 Sum_probs=37.5
Q ss_pred EEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc---------ccCCCCCCceEEEEeCCCc
Q 013976 301 LLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH---------HRAKSDGFPTILFFPAGNK 363 (432)
Q Consensus 301 lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~---------~~~~i~~~P~i~~~~~g~~ 363 (432)
+++|+++||++|..+.+.|.++ ++.+..+|++..+. ...+..++|++.+ +|+.
T Consensus 19 v~vy~~~~Cp~C~~ak~~L~~~--------~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi--~g~~ 80 (114)
T 3h8q_A 19 VVIFSKSYCPHSTRVKELFSSL--------GVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFV--NKVH 80 (114)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT--------TCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEE--TTEE
T ss_pred EEEEEcCCCCcHHHHHHHHHHc--------CCCcEEEEecCCCChHHHHHHHHHHhCCCccCEEEE--CCEE
Confidence 5569999999999999888876 35566677765321 2346788999855 6643
No 436
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=95.39 E-value=0.00054 Score=54.52 Aligned_cols=68 Identities=16% Similarity=0.246 Sum_probs=50.8
Q ss_pred CC-cceEEEEEeC-cchhhhHHHHHHHHHhcc---CceEEEEEecCCcc----------------------cccchhhhh
Q 013976 168 PI-KNQLLLFAVS-NDSEKLLPVFEEAAKSFK---GKLIFVYVQMDNED----------------------VGKPVSEYF 220 (432)
Q Consensus 168 ~~-~~~i~~~~~~-~~~~~~~~~~~~~a~~~~---~~i~f~~vd~~~~~----------------------~~~~l~~~~ 220 (432)
++ ++++.|+++| +.|+...+.+.+++++++ ..+.++.++++... ....+++.|
T Consensus 25 gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (143)
T 2lus_A 25 DKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKY 104 (143)
Confidence 44 6788899999 999999999999999993 35777777766421 013577888
Q ss_pred CCCCCCCcEEEEEeCCC
Q 013976 221 GITGEAPKVLAYTGNDD 237 (432)
Q Consensus 221 ~i~~~~~P~i~i~~~~~ 237 (432)
|+... |++++++.++
T Consensus 105 ~v~~~--P~~~lid~~G 119 (143)
T 2lus_A 105 GITGI--PALVIVKKDG 119 (143)
Confidence 88776 8888887443
No 437
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=96.33 E-value=0.0015 Score=55.04 Aligned_cols=43 Identities=19% Similarity=0.367 Sum_probs=35.3
Q ss_pred CCcEEEEEeCCCChhhhhhHHHH---HHHHHHhcCCCCEEEEEEeCCC
Q 013976 297 SKDVLLEIYAPWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGTT 341 (432)
Q Consensus 297 ~~~~lv~f~~~~c~~c~~~~~~~---~~la~~~~~~~~~~~~~id~~~ 341 (432)
.++++|.|++.||++|+.+.|.+ .++.+.+.+ ++.|..++..-
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~ 59 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQ--GSRMVKYHVSL 59 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCT--TCCEEEEECSS
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCC--CCEEEEEechh
Confidence 36889999999999999999986 678777765 57787777654
No 438
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=96.33 E-value=0.01 Score=50.59 Aligned_cols=42 Identities=7% Similarity=-0.006 Sum_probs=36.0
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCc-eEEEEEecC
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMD 208 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~-i~f~~vd~~ 208 (432)
.+++++|.|+++| +.|....+.+.+++++|.++ +.++.|+++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 4567788899999 88999999999999999865 888888875
No 439
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=96.33 E-value=0.0022 Score=52.58 Aligned_cols=85 Identities=11% Similarity=0.069 Sum_probs=54.5
Q ss_pred CCcEEEEEe-CCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc-------------------------ccCCCC
Q 013976 297 SKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH-------------------------HRAKSD 350 (432)
Q Consensus 297 ~~~~lv~f~-~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~-------------------------~~~~i~ 350 (432)
+++++|.|| +.||.+|....+.+.++... .++.++.|+.+.... ..|++.
T Consensus 46 Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~----~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~ 121 (166)
T 3p7x_A 46 GKKKLISVVPSIDTGVCDQQTRKFNSDASK----EEGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVV 121 (166)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHSCT----TTSEEEEEESSCHHHHHHHHHHHTCSSCEEEECTTTCHHHHHHTCE
T ss_pred CCcEEEEEECCCCCCccHHHHHHHHHHhhc----CCCEEEEEECCCHHHHHHHHHHcCCCceEEccCCchhHHHHHhCCc
Confidence 578888888 78999999988888888665 257777777654211 123443
Q ss_pred C------CceEEEE-eCCCcccCce--eccCCCCHHHHHHHHHh
Q 013976 351 G------FPTILFF-PAGNKSFDPI--NVDVDRTVVALYKFLKK 385 (432)
Q Consensus 351 ~------~P~i~~~-~~g~~~~~~~--~y~g~~~~~~l~~fi~~ 385 (432)
. .|+.+++ ++|..+...+ ...+..+.+.+++.|++
T Consensus 122 ~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 122 MEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp ETTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred cccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 3 7888888 4554431000 02235567888888765
No 440
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=96.32 E-value=0.0078 Score=50.28 Aligned_cols=93 Identities=8% Similarity=-0.044 Sum_probs=61.2
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCc-eEEEEEecCC----c----ccccchhhhhCCC-------------
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDN----E----DVGKPVSEYFGIT------------- 223 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~-i~f~~vd~~~----~----~~~~~l~~~~~i~------------- 223 (432)
.++.+++.|+++| +.|....+.+.+++.+|.++ +.++.+.++. . +....+++.+++.
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~ 127 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDD 127 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHTTCCSEEBCCCBSSSTT
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCHHHHHHHHHHcCCCCeeeeeeccCChh
Confidence 4557788889999 99999999999999999864 8888887652 0 0012233333331
Q ss_pred ------------------CC---CCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHH
Q 013976 224 ------------------GE---APKVLAYTGNDDAKKHILDGELTLDKIKTFGEDF 259 (432)
Q Consensus 224 ------------------~~---~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~ 259 (432)
+. ..|+.++++.++...+.+.|..+.+.|.+.|+..
T Consensus 128 ~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 184 (185)
T 2gs3_A 128 AHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 184 (185)
T ss_dssp BCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGGGHHHH
T ss_pred hhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHHHHHHHHHHh
Confidence 10 0256667766555556667777777777766654
No 441
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=96.29 E-value=0.0081 Score=49.38 Aligned_cols=96 Identities=13% Similarity=0.026 Sum_probs=63.1
Q ss_pred CCCcceEEEEEeC-c-chhhhHHHHHHHHHhccC---ceEEEEEecCCc----ccccchh--------------------
Q 013976 167 SPIKNQLLLFAVS-N-DSEKLLPVFEEAAKSFKG---KLIFVYVQMDNE----DVGKPVS-------------------- 217 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~-~~~~~~~~~~~~a~~~~~---~i~f~~vd~~~~----~~~~~l~-------------------- 217 (432)
.++++++.|++.| + .|....+.+.++..++.+ ++.++.|.++.. +....++
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 3557788899999 6 899999999999999875 388888887521 0001111
Q ss_pred -hhhCC--------------CCCCCcEEEEEeCCCCceecCCCCC--CHHHHHHHHHHHhcC
Q 013976 218 -EYFGI--------------TGEAPKVLAYTGNDDAKKHILDGEL--TLDKIKTFGEDFLEG 262 (432)
Q Consensus 218 -~~~~i--------------~~~~~P~i~i~~~~~~~~y~~~~~~--~~~~i~~fi~~~~~g 262 (432)
+.|++ .....|+.++++.++...+.+.|.. +.+.|.+.|+..++.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~ 173 (174)
T 1xzo_A 112 IEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSASTL 173 (174)
T ss_dssp HHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHHTCC
T ss_pred HHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHHHhc
Confidence 22221 0123477778876654555555654 588999999988753
No 442
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=96.28 E-value=0.0045 Score=51.20 Aligned_cols=44 Identities=14% Similarity=0.296 Sum_probs=31.9
Q ss_pred CCcE-EEEEeCCCChhhh-hhHHHHHHHHHHhcCCCCEEEEE-EeCCC
Q 013976 297 SKDV-LLEIYAPWCGHCQ-AFEPTYNKLAKHLRGVDSIVIAK-MDGTT 341 (432)
Q Consensus 297 ~~~~-lv~f~~~~c~~c~-~~~~~~~~la~~~~~~~~~~~~~-id~~~ 341 (432)
++.+ |++|++.||..|. .-.|.|.+++..|+.. ++.++- +..+.
T Consensus 43 gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~-gv~vv~~iS~D~ 89 (173)
T 3mng_A 43 GKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAK-GVQVVACLSVND 89 (173)
T ss_dssp TSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTT-TCCEEEEEESSC
T ss_pred CCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEEcCCC
Confidence 4545 4555699999999 5889999999999864 455543 65554
No 443
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=96.27 E-value=0.0041 Score=54.94 Aligned_cols=45 Identities=9% Similarity=0.168 Sum_probs=38.7
Q ss_pred CCCcEEEEEe-CCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCC
Q 013976 296 ESKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 341 (432)
Q Consensus 296 ~~~~~lv~f~-~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~ 341 (432)
.++.+||+|| +.||..|....+.|.+++..|++. ++.++.|.++.
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~-gv~vv~IS~D~ 135 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI-NTEVVACSVDS 135 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTT-TEEEEEEESSC
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHc-CCEEEEEcCCC
Confidence 3578899998 999999999999999999999864 68888888764
No 444
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=96.26 E-value=0.0099 Score=48.13 Aligned_cols=89 Identities=10% Similarity=0.035 Sum_probs=61.6
Q ss_pred cceEEEE-EeC-cchhhhHHHHHHHHHhccC-ceEEEEEecCCcc------------------c--ccchhhhhCCC---
Q 013976 170 KNQLLLF-AVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNED------------------V--GKPVSEYFGIT--- 223 (432)
Q Consensus 170 ~~~i~~~-~~~-~~~~~~~~~~~~~a~~~~~-~i~f~~vd~~~~~------------------~--~~~l~~~~~i~--- 223 (432)
+.++.|| +.| +.|....+.+.+++.++.+ .+.++.|.++..+ . ...+.+.||+.
T Consensus 38 ~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~~ 117 (160)
T 1xvw_A 38 NVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGVFNEQ 117 (160)
T ss_dssp EEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTCEETT
T ss_pred CEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCCcccc
Confidence 5677787 889 9999999999999999975 4888888775311 0 34678889987
Q ss_pred -CCCCcEEEEEeCCCCceecCCCCC----CHHHHHHHHHH
Q 013976 224 -GEAPKVLAYTGNDDAKKHILDGEL----TLDKIKTFGED 258 (432)
Q Consensus 224 -~~~~P~i~i~~~~~~~~y~~~~~~----~~~~i~~fi~~ 258 (432)
+.+.|+.++++.++...+.+.|.. ..+.+.+.++.
T Consensus 118 ~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 118 AGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp TTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHH
T ss_pred CCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 552227777776654455554533 45666666654
No 445
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=95.96 E-value=0.017 Score=48.78 Aligned_cols=94 Identities=16% Similarity=0.151 Sum_probs=67.1
Q ss_pred CCCcceEEEE-EeC-cchhhhHHHHHHHHHhccC-ceEEEEEecCCcc-------------------------cccchhh
Q 013976 167 SPIKNQLLLF-AVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNED-------------------------VGKPVSE 218 (432)
Q Consensus 167 ~~~~~~i~~~-~~~-~~~~~~~~~~~~~a~~~~~-~i~f~~vd~~~~~-------------------------~~~~l~~ 218 (432)
.+++.++.|| +.| +.|....+.+.+++.+|++ .+.|+.|.++... ....+.+
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 112 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSE 112 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHH
Confidence 3456677788 888 9999999999999999975 4888888776410 0235678
Q ss_pred hhCCCCC----CCcEEEEEeCCCCceecCCC----CCCHHHHHHHHHHHh
Q 013976 219 YFGITGE----APKVLAYTGNDDAKKHILDG----ELTLDKIKTFGEDFL 260 (432)
Q Consensus 219 ~~~i~~~----~~P~i~i~~~~~~~~y~~~~----~~~~~~i~~fi~~~~ 260 (432)
.||+... ..|+.++++.+....+.+.| ..+.+.+.+.++...
T Consensus 113 ~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 113 DYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhcc
Confidence 8888621 24888888766544444433 356788999888865
No 446
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=95.91 E-value=0.0026 Score=49.79 Aligned_cols=56 Identities=11% Similarity=0.240 Sum_probs=37.1
Q ss_pred EEEEeCCCChhhhhh-HHHHHHHHHHhcCCCCEEEEEEeCCCcc--------c-ccCCCCCCceEEEEeCCCc
Q 013976 301 LLEIYAPWCGHCQAF-EPTYNKLAKHLRGVDSIVIAKMDGTTNE--------H-HRAKSDGFPTILFFPAGNK 363 (432)
Q Consensus 301 lv~f~~~~c~~c~~~-~~~~~~la~~~~~~~~~~~~~id~~~~~--------~-~~~~i~~~P~i~~~~~g~~ 363 (432)
+++|+++||++|..+ .+.+.+++. ..+.+..+|++..+ . ...+..++|++ |-+|..
T Consensus 39 Vvvy~~~~Cp~C~~a~k~~L~~~~~-----~~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~v--fi~g~~ 104 (129)
T 3ctg_A 39 VFVAAKTYCPYCKATLSTLFQELNV-----PKSKALVLELDEMSNGSEIQDALEEISGQKTVPNV--YINGKH 104 (129)
T ss_dssp EEEEECTTCHHHHHHHHHHHTTSCC-----CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTEE
T ss_pred EEEEECCCCCchHHHHHHHHHhcCc-----cCCCcEEEEccccCCHHHHHHHHHHHhCCCCCCEE--EECCEE
Confidence 678999999999998 777766531 12445555655432 1 24678899996 556643
No 447
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=95.89 E-value=0.0046 Score=51.75 Aligned_cols=40 Identities=30% Similarity=0.504 Sum_probs=34.7
Q ss_pred CCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCC
Q 013976 297 SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 340 (432)
Q Consensus 297 ~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~ 340 (432)
++++||.|++.||++|..+.|.+.++.+.+ + +.|..+++.
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~-~---v~~~~~p~~ 61 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA-G---TDIGKMHIT 61 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH-T---SCCEEEECC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh-C---CeEEEEecc
Confidence 578999999999999999999999999998 3 666677764
No 448
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=95.82 E-value=0.017 Score=48.98 Aligned_cols=93 Identities=15% Similarity=0.096 Sum_probs=66.5
Q ss_pred CCcceEEEE-EeC-cchhhhHHHHHHHHHhccC-ceEEEEEecCCcc-------------------------cccchhhh
Q 013976 168 PIKNQLLLF-AVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNED-------------------------VGKPVSEY 219 (432)
Q Consensus 168 ~~~~~i~~~-~~~-~~~~~~~~~~~~~a~~~~~-~i~f~~vd~~~~~-------------------------~~~~l~~~ 219 (432)
++..++.|| +.| +.|....+.+.+++.+|++ .+.|+.|.++... ....+.+.
T Consensus 36 gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ 115 (202)
T 1uul_A 36 GKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKS 115 (202)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHHH
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHHH
Confidence 456677777 788 8999999999999999975 4888888775410 02456788
Q ss_pred hCCCC----CCCcEEEEEeCCCCceecCCC----CCCHHHHHHHHHHHh
Q 013976 220 FGITG----EAPKVLAYTGNDDAKKHILDG----ELTLDKIKTFGEDFL 260 (432)
Q Consensus 220 ~~i~~----~~~P~i~i~~~~~~~~y~~~~----~~~~~~i~~fi~~~~ 260 (432)
||+.. ...|++++++.++...+.+.| ..+.+.+.+.++.+.
T Consensus 116 ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 116 YGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred cCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 88871 124988888776544444333 356789999998876
No 449
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=95.76 E-value=0.021 Score=49.17 Aligned_cols=95 Identities=17% Similarity=0.147 Sum_probs=67.8
Q ss_pred CCcceEEEE-EeC-cchhhhHHHHHHHHHhccC-ceEEEEEecCCcc-------------------------cccchhhh
Q 013976 168 PIKNQLLLF-AVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNED-------------------------VGKPVSEY 219 (432)
Q Consensus 168 ~~~~~i~~~-~~~-~~~~~~~~~~~~~a~~~~~-~i~f~~vd~~~~~-------------------------~~~~l~~~ 219 (432)
++..++.|| +.| +.|....+.+.+++.+|++ .+.++.|.++... ....+.+.
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ 135 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRD 135 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHHH
Confidence 456677778 788 9999999999999999964 4888888765310 02457788
Q ss_pred hCCC----CCCCcEEEEEeCCCCceecCCC----CCCHHHHHHHHHHHhcC
Q 013976 220 FGIT----GEAPKVLAYTGNDDAKKHILDG----ELTLDKIKTFGEDFLEG 262 (432)
Q Consensus 220 ~~i~----~~~~P~i~i~~~~~~~~y~~~~----~~~~~~i~~fi~~~~~g 262 (432)
||+. +...|++++++.+....+.+.| ..+.+++.+.++.+...
T Consensus 136 ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~~~ 186 (220)
T 1zye_A 136 YGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQFV 186 (220)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHHT
T ss_pred hCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhhhh
Confidence 8887 1134999999776644444333 36778999999987753
No 450
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=95.74 E-value=0.055 Score=44.01 Aligned_cols=93 Identities=10% Similarity=0.028 Sum_probs=63.5
Q ss_pred CCCcceEEEEEeC--cchhhhHHHHHHHHHhccCceEEEEEecCCccc--------------------ccchhhhhCCCC
Q 013976 167 SPIKNQLLLFAVS--NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDV--------------------GKPVSEYFGITG 224 (432)
Q Consensus 167 ~~~~~~i~~~~~~--~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~--------------------~~~l~~~~~i~~ 224 (432)
.+++.++.||+.| +.|....+.+.+++++| ..+.++.|+.+..+. ...+.+.||+..
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~ 121 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYI 121 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCBB
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCcc
Confidence 3556778888887 78999999999999999 668888887764210 234556677654
Q ss_pred C----CCcEEEEEeCCCCceecCCC-----CCCHHHHHHHHHHHh
Q 013976 225 E----APKVLAYTGNDDAKKHILDG-----ELTLDKIKTFGEDFL 260 (432)
Q Consensus 225 ~----~~P~i~i~~~~~~~~y~~~~-----~~~~~~i~~fi~~~~ 260 (432)
. ..|+.++++.++...+.+.| ..+.+.+.+.++.++
T Consensus 122 ~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 122 KELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp TTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred ccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 2 13888888766555554432 335678888887654
No 451
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=95.70 E-value=0.03 Score=47.33 Aligned_cols=97 Identities=6% Similarity=-0.062 Sum_probs=65.3
Q ss_pred CCCcceEEEEEeC-cc-hhhhHHHHHHHHHhcc----CceEEEEEecCCcc------------c-------------ccc
Q 013976 167 SPIKNQLLLFAVS-ND-SEKLLPVFEEAAKSFK----GKLIFVYVQMDNED------------V-------------GKP 215 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~-~~~~~~~~~~~a~~~~----~~i~f~~vd~~~~~------------~-------------~~~ 215 (432)
.++.+++.|++.| ++ |....+.|.++..++. +.+.++.|.++... + ...
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 119 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKN 119 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHH
Confidence 3556778888899 76 9999999999777765 35777777765210 0 124
Q ss_pred hhhhhCCC-CC-------------CCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhcCC
Q 013976 216 VSEYFGIT-GE-------------APKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLEGK 263 (432)
Q Consensus 216 l~~~~~i~-~~-------------~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~g~ 263 (432)
+++.||+. .. ..|+.++++.++...+.+.|..+.+.+.+.|...+..-
T Consensus 120 ~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~~l~~l 181 (200)
T 2b7k_A 120 ACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHVKSY 181 (200)
T ss_dssp HHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHHHHHHHHHHC
T ss_pred HHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHHHHHHHHHHHHHh
Confidence 56778876 22 12366677766655666777788888888888877643
No 452
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=95.68 E-value=0.0097 Score=42.30 Aligned_cols=77 Identities=9% Similarity=0.155 Sum_probs=54.2
Q ss_pred eEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcc-cccchhhhhC--CCCCCCcEEEEEeCCCCceecCCCCC
Q 013976 172 QLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNED-VGKPVSEYFG--ITGEAPKVLAYTGNDDAKKHILDGEL 247 (432)
Q Consensus 172 ~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~-~~~~l~~~~~--i~~~~~P~i~i~~~~~~~~y~~~~~~ 247 (432)
+++|+.+| +.|+.+.+.+.+++.++.+ +.+..+|..... ....+.+.+| +... |++++ ++ +.. |
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~-i~~~~vdi~~~~~~~~~l~~~~~~~~~~v--P~i~~--~g--~~i---~-- 70 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERDD-FQYQYVDIRAEGITKEDLQQKAGKPVETV--PQIFV--DQ--QHI---G-- 70 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSS-CEEEEECHHHHTCCSHHHHHHTCCCSCCS--CEEEE--TT--EEE---E--
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCC-ceEEEEecccChHHHHHHHHHhCCCCcee--CeEEE--CC--EEE---E--
Confidence 45666788 9999999999999998876 899999986521 0136777888 6666 99843 22 222 1
Q ss_pred CHHHHHHHHHHHh
Q 013976 248 TLDKIKTFGEDFL 260 (432)
Q Consensus 248 ~~~~i~~fi~~~~ 260 (432)
..+.|.+++++-+
T Consensus 71 ~~~~l~~~~~~~~ 83 (85)
T 1ego_A 71 GYTDFAAWVKENL 83 (85)
T ss_dssp SSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhc
Confidence 2367888887643
No 453
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=95.65 E-value=0.016 Score=50.12 Aligned_cols=87 Identities=10% Similarity=0.041 Sum_probs=59.2
Q ss_pred cEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc---------------------------------c
Q 013976 299 DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH---------------------------------H 345 (432)
Q Consensus 299 ~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~---------------------------------~ 345 (432)
.+|++|+++||..|....+.+.+++..|++. ++.++.|.++.... .
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~-~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va~ 112 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKR-NVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELAI 112 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTT-TEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHHH
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchHHHH
Confidence 4666678999999999999999999999864 67888777764210 1
Q ss_pred cCCCC------------CCceEEEEeCCCcccCcee-cc--CCCCHHHHHHHHHhcC
Q 013976 346 RAKSD------------GFPTILFFPAGNKSFDPIN-VD--VDRTVVALYKFLKKNA 387 (432)
Q Consensus 346 ~~~i~------------~~P~i~~~~~g~~~~~~~~-y~--g~~~~~~l~~fi~~~~ 387 (432)
.|++. .+|+++++.....+ +... +. ..++.+.|+..|+...
T Consensus 113 ~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I-~~~~~~~~~~gr~~~eil~~i~~l~ 168 (224)
T 1prx_A 113 LLGMLDPAEKDEKGMPVTARVVFVFGPDKKL-KLSILYPATTGRNFDEILRVVISLQ 168 (224)
T ss_dssp HTTSSCSCTTCSSSCCTTCCEEEEECTTSBE-EEEEECCTTBCCCHHHHHHHHHHHH
T ss_pred HhCCCCcccccCCCccccceEEEEECCCCEE-EEEEecCCCCCCCHHHHHHHHHHHH
Confidence 23442 47999999444333 1211 11 2468899988887654
No 454
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=95.49 E-value=0.03 Score=47.86 Aligned_cols=94 Identities=11% Similarity=0.151 Sum_probs=65.6
Q ss_pred CCCcceEEEE-EeC-cchhhhHHHHHHHHHhccC-ceEEEEEecCCcc-------------------------cccchhh
Q 013976 167 SPIKNQLLLF-AVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNED-------------------------VGKPVSE 218 (432)
Q Consensus 167 ~~~~~~i~~~-~~~-~~~~~~~~~~~~~a~~~~~-~i~f~~vd~~~~~-------------------------~~~~l~~ 218 (432)
.++..+|.|| +.| +.|....+.+.+++++|++ .+.++.|..+... ....+.+
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 130 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISK 130 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHH
Confidence 3456677777 788 8999999999999999963 4777777665310 0235677
Q ss_pred hhCCC---CCCCcEEEEEeCCCCceecCCC----CCCHHHHHHHHHHHh
Q 013976 219 YFGIT---GEAPKVLAYTGNDDAKKHILDG----ELTLDKIKTFGEDFL 260 (432)
Q Consensus 219 ~~~i~---~~~~P~i~i~~~~~~~~y~~~~----~~~~~~i~~fi~~~~ 260 (432)
.||+. +...|+.++++.+....+.+.| ..+.+.+.+.|+.+.
T Consensus 131 ~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 131 DYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 88887 1124888888776644454433 356889999988876
No 455
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=95.47 E-value=0.014 Score=50.68 Aligned_cols=88 Identities=5% Similarity=-0.045 Sum_probs=60.2
Q ss_pred CcEEEEEe-CCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc-----------------c--------------c
Q 013976 298 KDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-----------------H--------------H 345 (432)
Q Consensus 298 ~~~lv~f~-~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~-----------------~--------------~ 345 (432)
+.+||+|| ++||..|....+.+.++...|+.. ++.++.|.++... . .
T Consensus 30 ~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~-~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va~ 108 (233)
T 2v2g_A 30 SWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKR-GVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRELAV 108 (233)
T ss_dssp SEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHT-TEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHHH
T ss_pred CeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHHHHH
Confidence 47888888 899999999999999999999753 6778777766421 0 1
Q ss_pred cCCCC------------CCceEEEEeCCCcccCcee-cc--CCCCHHHHHHHHHhcC
Q 013976 346 RAKSD------------GFPTILFFPAGNKSFDPIN-VD--VDRTVVALYKFLKKNA 387 (432)
Q Consensus 346 ~~~i~------------~~P~i~~~~~g~~~~~~~~-y~--g~~~~~~l~~fi~~~~ 387 (432)
.|++. .+|+++++.....+ +... +. ..++.+.|++.|+...
T Consensus 109 ~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I-~~~~~~~~~~gr~~~eilr~l~~Lq 164 (233)
T 2v2g_A 109 KLGMVDPDERTSTGMPLTCRAVFIIGPDKKL-KLSILYPATTGRNFSEILRVIDSLQ 164 (233)
T ss_dssp HTTCEEEEEECTTCCEEECEEEEEECTTSBE-EEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HhCCcCcccccCCCcccccceEEEECCCCEE-EEEEecCCCCCCCHHHHHHHHHHHH
Confidence 23442 47899999444333 1211 21 1468899998887653
No 456
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=95.36 E-value=0.0038 Score=47.58 Aligned_cols=80 Identities=6% Similarity=0.093 Sum_probs=50.1
Q ss_pred ceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCc--ccccchhhhhCCCCCCCcEEEEEeCCCCceecCCCCC
Q 013976 171 NQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNE--DVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGEL 247 (432)
Q Consensus 171 ~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~--~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~~ 247 (432)
.+++|+++| +.|+.+.+.+.+++..| .++.+|.... .....+++.+|+... |++ +. ++. ....+.|..
T Consensus 21 ~vv~f~a~~C~~C~~~~~~l~~~~~~~----~~v~v~~~~~~~~~~~~l~~~~~v~~~--Pt~-~~-~g~-~v~~~~~~~ 91 (116)
T 2e7p_A 21 PVVVFSKTYCGYCNRVKQLLTQVGASY----KVVELDELSDGSQLQSALAHWTGRGTV--PNV-FI-GGK-QIGGCDTVV 91 (116)
T ss_dssp SEEEEECTTCHHHHHHHHHHHHHTCCC----EEEEGGGSTTHHHHHHHHHHHHSCCSS--CEE-EE-TTE-EEECHHHHH
T ss_pred CEEEEECCCChhHHHHHHHHHHcCCCe----EEEEccCCCChHHHHHHHHHHhCCCCc--CEE-EE-CCE-EECChHHHH
Confidence 356699999 99999999999886553 4444444331 001357889999887 999 44 221 222222322
Q ss_pred ---CHHHHHHHHHHH
Q 013976 248 ---TLDKIKTFGEDF 259 (432)
Q Consensus 248 ---~~~~i~~fi~~~ 259 (432)
+.+.|.+++...
T Consensus 92 ~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 92 EKHQRNELLPLLQDA 106 (116)
T ss_dssp HHHHTTCHHHHHHHT
T ss_pred HHHhCChHHHHHHHc
Confidence 556788888773
No 457
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=95.31 E-value=0.034 Score=46.59 Aligned_cols=94 Identities=13% Similarity=0.180 Sum_probs=66.3
Q ss_pred CCCcceEEEE-EeC-cchhhhHHHHHHHHHhccC-ceEEEEEecCCcc-------------------------cccchhh
Q 013976 167 SPIKNQLLLF-AVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNED-------------------------VGKPVSE 218 (432)
Q Consensus 167 ~~~~~~i~~~-~~~-~~~~~~~~~~~~~a~~~~~-~i~f~~vd~~~~~-------------------------~~~~l~~ 218 (432)
.++..++.|| +.| +.|....+.+.+++.+|++ .+.++.|..+... ....+.+
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 109 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIAR 109 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHH
Confidence 3556677788 888 9999999999999999963 4788888765310 0235678
Q ss_pred hhCCC---CCCCcEEEEEeCCCCceecCCC----CCCHHHHHHHHHHHh
Q 013976 219 YFGIT---GEAPKVLAYTGNDDAKKHILDG----ELTLDKIKTFGEDFL 260 (432)
Q Consensus 219 ~~~i~---~~~~P~i~i~~~~~~~~y~~~~----~~~~~~i~~fi~~~~ 260 (432)
.||+. +...|++++++.++...+.+.| ..+.+.+.+.++.+.
T Consensus 110 ~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 110 SYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp HTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHHH
T ss_pred HhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 88987 1124999999776644444433 246788888888765
No 458
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=95.25 E-value=0.039 Score=45.33 Aligned_cols=83 Identities=8% Similarity=0.134 Sum_probs=59.6
Q ss_pred cceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCc--------------------------------------
Q 013976 170 KNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNE-------------------------------------- 210 (432)
Q Consensus 170 ~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~-------------------------------------- 210 (432)
..++.|+..+ +.|..+.+.+.++.+++.+ +.+.+.+..-.
T Consensus 24 v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~~~~~~ 102 (175)
T 3gyk_A 24 VTVVEFFDYNCPYCRRAMAEVQGLVDADPN-VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGKANETG 102 (175)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSCCSHHH
T ss_pred EEEEEEECCCCccHHHHHHHHHHHHHhCCC-EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCCCCHHH
Confidence 3456677777 9999999999999998766 77777664310
Q ss_pred ----------------------------ccccchhhhhCCCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 211 ----------------------------DVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 211 ----------------------------~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
.-...+.+.+|+.+. |++++. + + .+.|..+.+.+.+.|+..+.
T Consensus 103 l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gt--Pt~~i~--g--~--~~~G~~~~~~l~~~i~~~l~ 173 (175)
T 3gyk_A 103 VLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGT--PSFVVE--D--A--LVPGFVEQSQLQDAVDRARK 173 (175)
T ss_dssp HHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSS--SEEEET--T--E--EECSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccC--CEEEEC--C--E--EeeCCCCHHHHHHHHHHHHh
Confidence 001234577899988 999762 2 2 45788899999999988653
No 459
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.20 E-value=0.027 Score=42.56 Aligned_cols=53 Identities=19% Similarity=0.154 Sum_probs=36.2
Q ss_pred EEEEEeCCCChhhh------hhHHHHHHHHHHhcCCCCEEEEEEeCCCccc------ccC--------CCCCCceEEEEe
Q 013976 300 VLLEIYAPWCGHCQ------AFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH------HRA--------KSDGFPTILFFP 359 (432)
Q Consensus 300 ~lv~f~~~~c~~c~------~~~~~~~~la~~~~~~~~~~~~~id~~~~~~------~~~--------~i~~~P~i~~~~ 359 (432)
.+++|+.+||+.|+ .+...|.+. ++.+..+|++.++. ..+ +..++|.| |-
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~~--------gi~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g~~tvP~v--fi 78 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEAN--------KIEFEEVDITMSEEQRQWMYKNVPPEKKPTQGNPLPPQI--FN 78 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHHT--------TCCEEEEETTTCHHHHHHHHHSCCTTTCCSSSSCCSCEE--EE
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHHc--------CCCEEEEECCCCHHHHHHHHHHhcccccccCCCCCCCEE--EE
Confidence 47788999999999 566555543 57788889887643 122 55678876 44
Q ss_pred CCC
Q 013976 360 AGN 362 (432)
Q Consensus 360 ~g~ 362 (432)
+|.
T Consensus 79 ~g~ 81 (111)
T 2ct6_A 79 GDR 81 (111)
T ss_dssp TTE
T ss_pred CCE
Confidence 553
No 460
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=95.09 E-value=0.045 Score=45.02 Aligned_cols=44 Identities=9% Similarity=0.034 Sum_probs=34.9
Q ss_pred CCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCC
Q 013976 297 SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT 340 (432)
Q Consensus 297 ~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~ 340 (432)
.+..|+.|+..+|++|..+.+.+.++.+.+.+..++.+...+..
T Consensus 27 a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 70 (175)
T 1z6m_A 27 APVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLFD 70 (175)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeCC
Confidence 35689999999999999999999999888822226777776653
No 461
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=95.09 E-value=0.019 Score=49.37 Aligned_cols=87 Identities=11% Similarity=0.166 Sum_probs=58.7
Q ss_pred cEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc------------------------------ccCC
Q 013976 299 DVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH------------------------------HRAK 348 (432)
Q Consensus 299 ~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~------------------------------~~~~ 348 (432)
.+|++|+++||..|....+.+.++...|++. ++.++.|.++.... ..|+
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~-~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va~~yg 112 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKL-NCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKLK 112 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTT-TEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHHHHHT
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHc-CCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHHHHHhC
Confidence 4555568999999999999999999999863 68888887764210 0124
Q ss_pred CC------------CCceEEEEeCCCcccCcee-cc--CCCCHHHHHHHHHhcC
Q 013976 349 SD------------GFPTILFFPAGNKSFDPIN-VD--VDRTVVALYKFLKKNA 387 (432)
Q Consensus 349 i~------------~~P~i~~~~~g~~~~~~~~-y~--g~~~~~~l~~fi~~~~ 387 (432)
+. .+|+++++.....+ +... +. ..++.+.|+..|+...
T Consensus 113 v~~~~~~~~~g~~~~~p~~flID~~G~I-~~~~~~~~~~g~~~~ell~~i~~lq 165 (220)
T 1xcc_A 113 IMDEQEKDITGLPLTCRCLFFISPEKKI-KATVLYPATTGRNAHEILRVLKSLQ 165 (220)
T ss_dssp CEEEEEECTTSCEEECEEEEEECTTSBE-EEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred CCCcccccCCCCCcccceEEEECCCCEE-EEEEecCCCCCCCHHHHHHHHHHHH
Confidence 41 37899999444343 2222 21 2578899988887654
No 462
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=94.94 E-value=0.025 Score=41.11 Aligned_cols=52 Identities=13% Similarity=0.068 Sum_probs=36.1
Q ss_pred EEEEeCCCChhh------hhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc------ccCC--CCCCceEEEEeCCC
Q 013976 301 LLEIYAPWCGHC------QAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH------HRAK--SDGFPTILFFPAGN 362 (432)
Q Consensus 301 lv~f~~~~c~~c------~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~------~~~~--i~~~P~i~~~~~g~ 362 (432)
+++|+++||+.| ..+...|.+. ++.+..+|++.++. ...+ ..++|.|. -+|.
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~~~--------~i~~~~~di~~~~~~~~~l~~~~g~~~~~vP~if--i~g~ 69 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILDGK--------RIQYQLVDISQDNALRDEMRTLAGNPKATPPQIV--NGNH 69 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHHT--------TCCCEEEETTSCHHHHHHHHHHTTCTTCCSCEEE--ETTE
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHHHC--------CCceEEEECCCCHHHHHHHHHHhCCCCCCCCEEE--ECCE
Confidence 677899999999 6766666543 46788889886643 1345 56899874 4553
No 463
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=94.91 E-value=0.038 Score=46.21 Aligned_cols=41 Identities=17% Similarity=0.361 Sum_probs=35.3
Q ss_pred CCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeC
Q 013976 297 SKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDG 339 (432)
Q Consensus 297 ~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~ 339 (432)
.+..|+.|+.++|++|..+.+.+.++.+.+.. ++.+..+..
T Consensus 25 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p~ 65 (193)
T 2rem_A 25 GKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK--DVRFTLVPA 65 (193)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT--TEEEEEEEC
T ss_pred CCeEEEEEECCCChhHhhhhHHHHHHHHhcCC--ceEEEEeCc
Confidence 45689999999999999999999999888865 688877776
No 464
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=94.90 E-value=0.022 Score=40.82 Aligned_cols=53 Identities=13% Similarity=0.231 Sum_probs=36.2
Q ss_pred EEEEeCC----CChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCC-----Cccc------ccCCCC-----CCceEEEEeC
Q 013976 301 LLEIYAP----WCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGT-----TNEH------HRAKSD-----GFPTILFFPA 360 (432)
Q Consensus 301 lv~f~~~----~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~-----~~~~------~~~~i~-----~~P~i~~~~~ 360 (432)
+++|+.+ ||+.|..+...|.+. ++.+..+|++ .+.. ...+.. ++|++.+ .+
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~--------gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~i-~~ 72 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK--------KQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFA-PD 72 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT--------TCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEEC-TT
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc--------CCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEEE-EC
Confidence 5678899 999999998887774 4667777877 3322 123555 8898654 34
Q ss_pred CC
Q 013976 361 GN 362 (432)
Q Consensus 361 g~ 362 (432)
|.
T Consensus 73 g~ 74 (87)
T 1aba_A 73 GS 74 (87)
T ss_dssp SC
T ss_pred CE
Confidence 43
No 465
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=94.89 E-value=0.057 Score=46.46 Aligned_cols=93 Identities=13% Similarity=0.166 Sum_probs=64.1
Q ss_pred CCCcceEEEEE-eC-cchhhhHHHHHHHHHhccCc-eEEEEEecCCcc-------------------------cccchhh
Q 013976 167 SPIKNQLLLFA-VS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNED-------------------------VGKPVSE 218 (432)
Q Consensus 167 ~~~~~~i~~~~-~~-~~~~~~~~~~~~~a~~~~~~-i~f~~vd~~~~~-------------------------~~~~l~~ 218 (432)
.+++++|.||+ .| +.|....+.+.+++++|+++ +.|+.|.++... ....+.+
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 147 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISK 147 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHH
Confidence 45567777885 88 89999999999999999864 888888776421 0234667
Q ss_pred hhCCC----CCCCcEEEEEeCCCCceecCCC----CCCHHHHHHHHHHH
Q 013976 219 YFGIT----GEAPKVLAYTGNDDAKKHILDG----ELTLDKIKTFGEDF 259 (432)
Q Consensus 219 ~~~i~----~~~~P~i~i~~~~~~~~y~~~~----~~~~~~i~~fi~~~ 259 (432)
.||+. +...|+.++++.+....+.+.| ....+.+.+.+...
T Consensus 148 ~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~l 196 (222)
T 3ztl_A 148 AYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAF 196 (222)
T ss_dssp HTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 88886 1134988888776644444433 23567777777654
No 466
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=94.70 E-value=0.012 Score=46.21 Aligned_cols=54 Identities=22% Similarity=0.296 Sum_probs=36.3
Q ss_pred cEEEEEeC----CCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--c----cCCCCCCceEEEEeCCC
Q 013976 299 DVLLEIYA----PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--H----RAKSDGFPTILFFPAGN 362 (432)
Q Consensus 299 ~~lv~f~~----~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~----~~~i~~~P~i~~~~~g~ 362 (432)
.++|+.++ +||+.|..+...|.++ ++.+..+|++.++. . ..+..++|.| |-+|.
T Consensus 36 ~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~--------gv~y~~vdI~~d~~~~~~L~~~~G~~tvP~V--fI~G~ 99 (135)
T 2wci_A 36 PILLYMKGSPKLPSCGFSAQAVQALAAC--------GERFAYVDILQNPDIRAELPKYANWPTFPQL--WVDGE 99 (135)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHTT--------CSCCEEEEGGGCHHHHHHHHHHHTCCSSCEE--EETTE
T ss_pred CEEEEEEecCCCCCCccHHHHHHHHHHc--------CCceEEEECCCCHHHHHHHHHHHCCCCcCEE--EECCE
Confidence 45554443 8999999988887765 46677788876543 1 2366788876 44554
No 467
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=94.22 E-value=0.11 Score=41.96 Aligned_cols=92 Identities=9% Similarity=-0.021 Sum_probs=59.4
Q ss_pred CCcceEEEEE-eC-cchhhhHHHHHHHHHhccCc-eEEEEEecCCcc------------------cccchhhhhCCCCC-
Q 013976 168 PIKNQLLLFA-VS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNED------------------VGKPVSEYFGITGE- 225 (432)
Q Consensus 168 ~~~~~i~~~~-~~-~~~~~~~~~~~~~a~~~~~~-i~f~~vd~~~~~------------------~~~~l~~~~~i~~~- 225 (432)
+++.++.||. .| +.|....+.+.++.++|+++ +.++.|.++..+ ....+.+.||+...
T Consensus 35 gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~ 114 (163)
T 3gkn_A 35 GHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKEK 114 (163)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEEE
T ss_pred CCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCcccc
Confidence 4456677776 78 88999999999999999753 777777665321 12345566776541
Q ss_pred ---------CCcEEEEEeCCCCceecCCCC---CCHHHHHHHHHHH
Q 013976 226 ---------APKVLAYTGNDDAKKHILDGE---LTLDKIKTFGEDF 259 (432)
Q Consensus 226 ---------~~P~i~i~~~~~~~~y~~~~~---~~~~~i~~fi~~~ 259 (432)
..|+.++++.++...+.+.+. ...+.+.+.++..
T Consensus 115 ~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 115 NMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKAH 160 (163)
T ss_dssp EETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred ccccccccCcceEEEEECCCCeEEEEEcCCCcccCHHHHHHHHHHH
Confidence 048888887766555444332 3345666666654
No 468
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=94.09 E-value=0.035 Score=46.57 Aligned_cols=42 Identities=24% Similarity=0.506 Sum_probs=34.1
Q ss_pred CCcEEEEEeCCCChhhhhhHHHH---HHHHHHhcCCCCEEEEEEeCC
Q 013976 297 SKDVLLEIYAPWCGHCQAFEPTY---NKLAKHLRGVDSIVIAKMDGT 340 (432)
Q Consensus 297 ~~~~lv~f~~~~c~~c~~~~~~~---~~la~~~~~~~~~~~~~id~~ 340 (432)
.++.||.|+..||++|..+.+.+ .++.+.+.+ ++.|..++..
T Consensus 21 ~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~--~v~~~~~~~~ 65 (191)
T 3l9s_A 21 GEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPE--GTKMTKYHVE 65 (191)
T ss_dssp SSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCT--TCCEEEEECS
T ss_pred CCCeEEEEECCCChhHHHhChhccchHHHHHhCCC--CcEEEEEecc
Confidence 37899999999999999999986 689999876 4666665543
No 469
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=94.09 E-value=0.027 Score=42.61 Aligned_cols=53 Identities=17% Similarity=0.343 Sum_probs=36.3
Q ss_pred EEEEEeC-----CCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--c----cCCCCCCceEEEEeCCC
Q 013976 300 VLLEIYA-----PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--H----RAKSDGFPTILFFPAGN 362 (432)
Q Consensus 300 ~lv~f~~-----~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~----~~~i~~~P~i~~~~~g~ 362 (432)
-+|+|.. +||+.|......|.+. ++.+..+|++.++. . ..+..++|.+. -+|.
T Consensus 17 ~Vvlf~kg~~~~~~Cp~C~~ak~~L~~~--------gi~y~~~di~~d~~~~~~l~~~~g~~tvP~if--i~g~ 80 (111)
T 3zyw_A 17 PCMLFMKGTPQEPRCGFSKQMVEILHKH--------NIQFSSFDIFSDEEVRQGLKAYSSWPTYPQLY--VSGE 80 (111)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHHT--------TCCCEEEEGGGCHHHHHHHHHHHTCCSSCEEE--ETTE
T ss_pred CEEEEEecCCCCCcchhHHHHHHHHHHc--------CCCeEEEECcCCHHHHHHHHHHHCCCCCCEEE--ECCE
Confidence 3456777 9999999998888765 45667778776543 1 12567889874 4553
No 470
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=94.02 E-value=0.058 Score=46.19 Aligned_cols=83 Identities=11% Similarity=0.195 Sum_probs=57.1
Q ss_pred CCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCC-------------------------------------
Q 013976 168 PIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDN------------------------------------- 209 (432)
Q Consensus 168 ~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~------------------------------------- 209 (432)
++..+++|+.+| +.|+.+.+.+.+++.. .+.+.++...-
T Consensus 86 ~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~---~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~~ 162 (216)
T 1eej_A 86 EKHVITVFTDITCGYCHKLHEQMADYNAL---GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPAS 162 (216)
T ss_dssp CCEEEEEEECTTCHHHHHHHTTHHHHHHT---TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCCC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHhC---CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChhH
Confidence 345567788888 9999999999998764 36665553210
Q ss_pred ---c-ccccchhhhhCCCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHh
Q 013976 210 ---E-DVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFL 260 (432)
Q Consensus 210 ---~-~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~ 260 (432)
. +-+..+.+.+|+++. |++++. ++ . .+.|..+.+.|.++++...
T Consensus 163 ~~~~v~~~~~l~~~~gV~gt--Pt~v~~-dG--~--~~~G~~~~~~l~~~l~~~~ 210 (216)
T 1eej_A 163 CDVDIADHYALGVQLGVSGT--PAVVLS-NG--T--LVPGYQPPKEMKEFLDEHQ 210 (216)
T ss_dssp CSCCHHHHHHHHHHHTCCSS--SEEECT-TS--C--EEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcc--CEEEEc-CC--e--EecCCCCHHHHHHHHHHhh
Confidence 0 002346688999998 999543 22 2 4468789999999998764
No 471
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=93.47 E-value=0.14 Score=43.53 Aligned_cols=81 Identities=12% Similarity=0.204 Sum_probs=55.6
Q ss_pred CCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCc------------------------------------
Q 013976 168 PIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNE------------------------------------ 210 (432)
Q Consensus 168 ~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~------------------------------------ 210 (432)
++..+++|+.+| +.|+.+.+.+.+++.. + +.+.++...-.
T Consensus 86 ~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~--~-v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~~ 162 (211)
T 1t3b_A 86 EKHVVTVFMDITCHYCHLLHQQLKEYNDL--G-ITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEVK 162 (211)
T ss_dssp CSEEEEEEECTTCHHHHHHHTTHHHHHHT--T-EEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSCC
T ss_pred CCEEEEEEECCCCHhHHHHHHHHHHHHhC--C-cEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChHH
Confidence 334566777888 9999999999997663 3 66655433210
Q ss_pred -----ccccchhhhhCCCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHH
Q 013976 211 -----DVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGED 258 (432)
Q Consensus 211 -----~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~ 258 (432)
+-+..+.+.+|+++. |++++ .++ + .+.|..+.+.|.++++.
T Consensus 163 ~~~~v~~~~~l~~~~gV~gT--Pt~vi-~nG--~--~~~G~~~~~~l~~~l~~ 208 (211)
T 1t3b_A 163 TPNIVKKHYELGIQFGVRGT--PSIVT-STG--E--LIGGYLKPADLLRALEE 208 (211)
T ss_dssp CSSHHHHHHHHHHHHTCCSS--CEEEC-TTS--C--CCCSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcC--CEEEE-eCC--E--EecCCCCHHHHHHHHHh
Confidence 002345678999998 99976 333 2 45688899999999876
No 472
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=93.35 E-value=0.47 Score=41.69 Aligned_cols=80 Identities=15% Similarity=0.181 Sum_probs=53.4
Q ss_pred CcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc-------------------c-ccCCCCCC--ceE
Q 013976 298 KDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-------------------H-HRAKSDGF--PTI 355 (432)
Q Consensus 298 ~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~-------------------~-~~~~i~~~--P~i 355 (432)
...+.+|++++|++|......+.+++..+ ++....++++..+ . ..++..++ |.+
T Consensus 43 ~~~VelyTs~gCp~C~~Ak~lL~~~~~~~----~vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G~~tVyTPqI 118 (270)
T 2axo_A 43 KGVVELFTSQGCASCPPADEALRKMIQKG----DVVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALGRNGVYTPQA 118 (270)
T ss_dssp CCEEEEEECTTCTTCHHHHHHHHHHHHHT----SSEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTTCSCCCSSEE
T ss_pred CcEEEEEeCCCCCChHHHHHHHHHhhccC----CeeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhCCCcccCCEE
Confidence 35788999999999999999999998764 3433333433222 1 24577888 987
Q ss_pred EEEeCCCcccCceeccCCCCHHHHHHHHHhcCCC
Q 013976 356 LFFPAGNKSFDPINVDVDRTVVALYKFLKKNASI 389 (432)
Q Consensus 356 ~~~~~g~~~~~~~~y~g~~~~~~l~~fi~~~~~~ 389 (432)
++ +|.. ..++.+.+.|.+.|.+....
T Consensus 119 ~I--ng~~------~v~G~d~~~l~~~l~~~~~~ 144 (270)
T 2axo_A 119 IL--NGRD------HVKGADVRGIYDRLDAFKRE 144 (270)
T ss_dssp EE--TTTE------EEETTCHHHHHHHHHHHHHT
T ss_pred EE--CCEE------eecCCCHHHHHHHHHHhhcc
Confidence 66 5542 23345678888888765443
No 473
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=93.27 E-value=0.049 Score=40.93 Aligned_cols=46 Identities=20% Similarity=0.442 Sum_probs=32.1
Q ss_pred CCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCccc--c----cCCCCCCceEEEEeCCC
Q 013976 307 PWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH--H----RAKSDGFPTILFFPAGN 362 (432)
Q Consensus 307 ~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~~--~----~~~i~~~P~i~~~~~g~ 362 (432)
|||+.|+.....|.+. ++.+..+|++.++. . ..+..++|.+ |-+|.
T Consensus 31 p~Cp~C~~ak~~L~~~--------gi~~~~~dI~~~~~~~~~l~~~~g~~tvP~i--fi~g~ 82 (109)
T 3ipz_A 31 PMCGFSNTVVQILKNL--------NVPFEDVNILENEMLRQGLKEYSNWPTFPQL--YIGGE 82 (109)
T ss_dssp BSSHHHHHHHHHHHHT--------TCCCEEEEGGGCHHHHHHHHHHHTCSSSCEE--EETTE
T ss_pred CCChhHHHHHHHHHHc--------CCCcEEEECCCCHHHHHHHHHHHCCCCCCeE--EECCE
Confidence 5999999998888875 45667778765544 1 2267789965 44554
No 474
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=93.27 E-value=0.14 Score=43.12 Aligned_cols=42 Identities=10% Similarity=0.108 Sum_probs=37.7
Q ss_pred CCcceEEEEEeC-cchhhhHHHH---HHHHHhccCceEEEEEecCC
Q 013976 168 PIKNQLLLFAVS-NDSEKLLPVF---EEAAKSFKGKLIFVYVQMDN 209 (432)
Q Consensus 168 ~~~~~i~~~~~~-~~~~~~~~~~---~~~a~~~~~~i~f~~vd~~~ 209 (432)
.++.++.||..| ++|..+.+.+ .++++++.+++.|..++...
T Consensus 113 ~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~ 158 (197)
T 1un2_A 113 GAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNF 158 (197)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSS
T ss_pred CCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCc
Confidence 446788899999 9999999998 99999999899999999875
No 475
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=93.27 E-value=0.044 Score=42.50 Aligned_cols=95 Identities=11% Similarity=0.075 Sum_probs=51.3
Q ss_pred ccchhhhhcCCCcEEEEEeCCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCCcc--c---c----cCCCCCCceEEE
Q 013976 287 NNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--H---H----RAKSDGFPTILF 357 (432)
Q Consensus 287 ~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~~~--~---~----~~~i~~~P~i~~ 357 (432)
.+|++.+ +. .+ +++|..+||+.|..+...|.+. ..- ++.+..+|++..+ . . ..+..++|.|.
T Consensus 5 ~~~~~ii-~~-~~-Vvvysk~~Cp~C~~ak~lL~~~---~~~--~v~~~~idid~~~d~~~~~~~l~~~~G~~tVP~If- 75 (127)
T 3l4n_A 5 KEYSLIL-DL-SP-IIIFSKSTCSYSKGMKELLENE---YQF--IPNYYIIELDKHGHGEELQEYIKLVTGRGTVPNLL- 75 (127)
T ss_dssp HHHHHHH-TS-CS-EEEEECTTCHHHHHHHHHHHHH---EEE--ESCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEE-
T ss_pred HHHHHHH-cc-CC-EEEEEcCCCccHHHHHHHHHHh---ccc--CCCcEEEEecCCCCHHHHHHHHHHHcCCCCcceEE-
Confidence 3456654 22 23 7889999999999998887774 111 1233444544332 1 1 13667899984
Q ss_pred EeCCCcccCceeccC---CCCHHHHHHHHHhcCCCCCccc
Q 013976 358 FPAGNKSFDPINVDV---DRTVVALYKFLKKNASIPFKIQ 394 (432)
Q Consensus 358 ~~~g~~~~~~~~y~g---~~~~~~l~~fi~~~~~~~~~~~ 394 (432)
-+|..+. .++. ......|...|+..+...+.+.
T Consensus 76 -I~G~~IG---G~ddl~~l~~~G~L~~lL~~~g~~~~~~~ 111 (127)
T 3l4n_A 76 -VNGVSRG---GNEEIKKLHTQGKLLESLQVWSDGKFSVE 111 (127)
T ss_dssp -ETTEECC---CHHHHHHHHHTTCHHHHHHHTCTTSCEEE
T ss_pred -ECCEEEc---CHHHHHHHHHCCCHHHHHHHhcCCcEEEE
Confidence 4554331 1111 1112345556666666555443
No 476
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=92.70 E-value=0.14 Score=39.31 Aligned_cols=55 Identities=15% Similarity=0.211 Sum_probs=35.8
Q ss_pred CcEEEEEeC----CCChhhhhhHHHHHHHHHHhcCCCCEE---EEEEeCCCccc--c----cCCCCCCceEEEEeCCC
Q 013976 298 KDVLLEIYA----PWCGHCQAFEPTYNKLAKHLRGVDSIV---IAKMDGTTNEH--H----RAKSDGFPTILFFPAGN 362 (432)
Q Consensus 298 ~~~lv~f~~----~~c~~c~~~~~~~~~la~~~~~~~~~~---~~~id~~~~~~--~----~~~i~~~P~i~~~~~g~ 362 (432)
.+++|+-.+ |||++|..+...|.++ ++. +..+|+..+.. . ..+..++|.| |-+|.
T Consensus 16 ~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~--------gv~~~~~~~~dv~~~~~~~~~l~~~sg~~tvP~v--fI~g~ 83 (121)
T 3gx8_A 16 APVVLFMKGTPEFPKCGFSRATIGLLGNQ--------GVDPAKFAAYNVLEDPELREGIKEFSEWPTIPQL--YVNKE 83 (121)
T ss_dssp CSEEEEESBCSSSBCTTHHHHHHHHHHHH--------TBCGGGEEEEECTTCHHHHHHHHHHHTCCSSCEE--EETTE
T ss_pred CCEEEEEeccCCCCCCccHHHHHHHHHHc--------CCCcceEEEEEecCCHHHHHHHHHHhCCCCCCeE--EECCE
Confidence 344444443 5999999999888886 344 66778776544 1 2356788887 44554
No 477
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=92.65 E-value=0.14 Score=44.64 Aligned_cols=86 Identities=8% Similarity=0.023 Sum_probs=57.7
Q ss_pred ceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCc---------------------------------------
Q 013976 171 NQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNE--------------------------------------- 210 (432)
Q Consensus 171 ~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~--------------------------------------- 210 (432)
.+++|+.++ +.|+++.+.+.++... +++.|.++...-.
T Consensus 100 ~v~~F~D~~Cp~C~~~~~~l~~~~~~--g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~~~~~~ 177 (241)
T 1v58_A 100 IVYVFADPFCPYCKQFWQQARPWVDS--GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNVPANV 177 (241)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHT--TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCCCSSC
T ss_pred EEEEEECCCChhHHHHHHHHHHHHhC--CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCCccccC
Confidence 355566677 8999999999887775 5688777654210
Q ss_pred --------ccccchhhhhCCCCCCCcEEEEEeCCCCceecCCCCCCHHHHHHHHHHHhc
Q 013976 211 --------DVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLDKIKTFGEDFLE 261 (432)
Q Consensus 211 --------~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~~~~~~i~~fi~~~~~ 261 (432)
+-+..+.+.+|+++. |++++.+.+ +......|..+.+.|.++++..+.
T Consensus 178 ~~~~~~~v~~~~~l~~~~gv~gt--Pt~vi~~~~-G~~~~~~G~~~~~~L~~~l~~~~~ 233 (241)
T 1v58_A 178 STEQMKVLSDNEKLMDDLGANVT--PAIYYMSKE-NTLQQAVGLPDQKTLNIIMGNKLQ 233 (241)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCSS--CEEEEEETT-TEEEEEESSCCHHHHHHHTTC---
T ss_pred CHHHHHHHHHHHHHHHHcCCCCC--CEEEEECCC-CCEEEecCCCCHHHHHHHHHHHHH
Confidence 001234578899988 999887532 333356788899999998887553
No 478
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=92.65 E-value=0.32 Score=39.75 Aligned_cols=92 Identities=14% Similarity=0.073 Sum_probs=57.8
Q ss_pred CCCcceEEEEEeC--cchhhhHHHHHHHHHhccCceEEEEEecCCcc-------------------cccchhhhhCCCCC
Q 013976 167 SPIKNQLLLFAVS--NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNED-------------------VGKPVSEYFGITGE 225 (432)
Q Consensus 167 ~~~~~~i~~~~~~--~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~-------------------~~~~l~~~~~i~~~ 225 (432)
.+++.++.||+.| +.|....+.+.+++++ ..+.|+.|+.+... ....+.+.||+...
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~ 120 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA--SGATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVTIA 120 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH--TTCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTCBBC
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh--cCCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCccc
Confidence 3556677788777 7899999999999998 45888888775211 02456778887543
Q ss_pred C-------CcEEEEEeCCCCceecCCC-CC-CHHHHHHHHHHHh
Q 013976 226 A-------PKVLAYTGNDDAKKHILDG-EL-TLDKIKTFGEDFL 260 (432)
Q Consensus 226 ~-------~P~i~i~~~~~~~~y~~~~-~~-~~~~i~~fi~~~~ 260 (432)
. .|+.++++.++...+.+.| .. ....+.+.++.+.
T Consensus 121 ~~~~~g~~~p~~~lid~~G~I~~~~~g~~~~~~~~~~~~l~~l~ 164 (175)
T 1xvq_A 121 DGPMAGLLARAIVVIGADGNVAYTELVPEIAQEPNYEAALAALG 164 (175)
T ss_dssp SSTTTTSBCSEEEEECTTSBEEEEEECSBTTCCCCHHHHHHHHH
T ss_pred ccccCCcccceEEEECCCCeEEEEEECCCcCCCCCHHHHHHHHH
Confidence 1 2777777765544444432 22 3334555555443
No 479
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=92.62 E-value=0.49 Score=40.30 Aligned_cols=41 Identities=10% Similarity=0.047 Sum_probs=33.2
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCc-eEEEEEecC
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMD 208 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~-i~f~~vd~~ 208 (432)
.++.++|.|++.| +.|. ..+.|.++.++|.++ +.++.+.++
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d 97 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCN 97 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEcc
Confidence 4567788888999 8898 788999999999754 888888765
No 480
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=92.36 E-value=0.15 Score=41.85 Aligned_cols=43 Identities=23% Similarity=0.357 Sum_probs=33.5
Q ss_pred CcEEEEEeCCCChhhhh-hHHHHHHHHHHhcCCCCE-EEEEEeCCC
Q 013976 298 KDVLLEIYAPWCGHCQA-FEPTYNKLAKHLRGVDSI-VIAKMDGTT 341 (432)
Q Consensus 298 ~~~lv~f~~~~c~~c~~-~~~~~~~la~~~~~~~~~-~~~~id~~~ 341 (432)
..+|++|++.||+.|.. -.+.|.+++..|+.. ++ .++-|.++.
T Consensus 49 ~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~-g~d~VigIS~D~ 93 (176)
T 4f82_A 49 RVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAA-GIDEIWCVSVND 93 (176)
T ss_dssp EEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHT-TCCEEEEEESSC
T ss_pred eEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhC-CCCEEEEEeCCC
Confidence 35677888999999998 899999999999753 45 666666654
No 481
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=92.28 E-value=0.1 Score=39.81 Aligned_cols=46 Identities=15% Similarity=0.297 Sum_probs=31.7
Q ss_pred CCChhhhhhHHHHHHHHHHhcCCCCEE-EEEEeCCCccc--cc----CCCCCCceEEEEeCCC
Q 013976 307 PWCGHCQAFEPTYNKLAKHLRGVDSIV-IAKMDGTTNEH--HR----AKSDGFPTILFFPAGN 362 (432)
Q Consensus 307 ~~c~~c~~~~~~~~~la~~~~~~~~~~-~~~id~~~~~~--~~----~~i~~~P~i~~~~~g~ 362 (432)
|||++|......|.++ ++. +..+|++.++. .. .+..++|.| |-+|+
T Consensus 33 p~Cp~C~~ak~lL~~~--------gv~~~~~vdV~~d~~~~~~l~~~tg~~tvP~v--fI~g~ 85 (118)
T 2wem_A 33 PQCGFSNAVVQILRLH--------GVRDYAAYNVLDDPELRQGIKDYSNWPTIPQV--YLNGE 85 (118)
T ss_dssp BSSHHHHHHHHHHHHT--------TCCCCEEEESSSCHHHHHHHHHHHTCCSSCEE--EETTE
T ss_pred CccHHHHHHHHHHHHc--------CCCCCEEEEcCCCHHHHHHHHHHhCCCCcCeE--EECCE
Confidence 5999999998888775 453 66778776543 11 256789987 44554
No 482
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=91.87 E-value=0.11 Score=44.54 Aligned_cols=89 Identities=10% Similarity=0.007 Sum_probs=55.0
Q ss_pred CCcEEEEEeCCC-Chhhh-----hhHHHHHHHHHHhcCCCCEEEEEEeCCCcc----------------------c---c
Q 013976 297 SKDVLLEIYAPW-CGHCQ-----AFEPTYNKLAKHLRGVDSIVIAKMDGTTNE----------------------H---H 345 (432)
Q Consensus 297 ~~~~lv~f~~~~-c~~c~-----~~~~~~~~la~~~~~~~~~~~~~id~~~~~----------------------~---~ 345 (432)
++.+||+||+.| |+.|. ...+.|.++ +. ++.++-|+++... . .
T Consensus 48 Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~~---gv~VvgIS~Ds~~~~~~f~~~~gl~~fplLsD~~~~~vak 121 (224)
T 3keb_A 48 HTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---WP---HLKLIVITVDSPSSLARARHEHGLPNIALLSTLRGRDFHK 121 (224)
T ss_dssp TCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---CT---TSEEEEEESSCHHHHHHHHHHHCCTTCEEEESTTCTTHHH
T ss_pred CCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---cC---CCEEEEEECCCHHHHHHHHHHcCCCCceEEEcCCchHHHH
Confidence 578999999888 99999 666666666 42 4666666655310 0 2
Q ss_pred cCCCCC---------CceEEEEe-CCCcccCc--eeccCCCCHHHHHHHHHhcCCCCC
Q 013976 346 RAKSDG---------FPTILFFP-AGNKSFDP--INVDVDRTVVALYKFLKKNASIPF 391 (432)
Q Consensus 346 ~~~i~~---------~P~i~~~~-~g~~~~~~--~~y~g~~~~~~l~~fi~~~~~~~~ 391 (432)
.|++.. .|+.+++. +|.....- ..+.+..+.+.+++.|+.......
T Consensus 122 ~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l~~~~~ 179 (224)
T 3keb_A 122 RYGVLITEYPLSGYTSPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQEGEQQAM 179 (224)
T ss_dssp HTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHHHHHHC-
T ss_pred HhCCccccccccCCccCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHHhhhccc
Confidence 344443 69999995 55432100 112346778889888887654333
No 483
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=91.73 E-value=0.6 Score=39.44 Aligned_cols=41 Identities=5% Similarity=-0.084 Sum_probs=32.5
Q ss_pred CCCcceEEEEEeC-cchhhhHHHHHHHHHhccCc-eEEEEEecC
Q 013976 167 SPIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMD 208 (432)
Q Consensus 167 ~~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~-i~f~~vd~~ 208 (432)
.++.++|.|++.| +.| ...+.|.++.++|.++ +.++.+.++
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d 79 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCN 79 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECc
Confidence 4557778888999 889 5778999999999864 777777754
No 484
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=91.58 E-value=0.38 Score=39.52 Aligned_cols=92 Identities=10% Similarity=-0.017 Sum_probs=56.6
Q ss_pred CCcceEEEE-EeC-cchhhhHHHHHHHHHhccCc-eEEEEEecCCccc------------------ccchhhhhCCCCC-
Q 013976 168 PIKNQLLLF-AVS-NDSEKLLPVFEEAAKSFKGK-LIFVYVQMDNEDV------------------GKPVSEYFGITGE- 225 (432)
Q Consensus 168 ~~~~~i~~~-~~~-~~~~~~~~~~~~~a~~~~~~-i~f~~vd~~~~~~------------------~~~l~~~~~i~~~- 225 (432)
+++.+++|| +.| +.|....+.+.++.++|+++ +.++.|.++..+. ...+.+.||+...
T Consensus 51 Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~~ 130 (179)
T 3ixr_A 51 NQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIKEK 130 (179)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEEEE
T ss_pred CCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCcccc
Confidence 445566666 677 78999999999999999763 6666665554221 2344556666321
Q ss_pred ---------CCcEEEEEeCCCCceecCCC---CCCHHHHHHHHHHH
Q 013976 226 ---------APKVLAYTGNDDAKKHILDG---ELTLDKIKTFGEDF 259 (432)
Q Consensus 226 ---------~~P~i~i~~~~~~~~y~~~~---~~~~~~i~~fi~~~ 259 (432)
..|+.++++.+....+.+.+ ..+.+.+.+.++.+
T Consensus 131 ~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~~~~il~~l~~l 176 (179)
T 3ixr_A 131 TMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLNKLKAH 176 (179)
T ss_dssp CCC--CEEEECCEEEEECTTSBEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred cccCcccCCcceEEEEECCCCEEEEEEcCCCCCCCHHHHHHHHHHH
Confidence 13777777766544444433 23455666666554
No 485
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=91.50 E-value=0.22 Score=37.94 Aligned_cols=37 Identities=19% Similarity=0.070 Sum_probs=26.1
Q ss_pred EEEEEeCCCChhhh------hhHHHHHHHHHHhcCCCCEEEEEEeCCCccc
Q 013976 300 VLLEIYAPWCGHCQ------AFEPTYNKLAKHLRGVDSIVIAKMDGTTNEH 344 (432)
Q Consensus 300 ~lv~f~~~~c~~c~------~~~~~~~~la~~~~~~~~~~~~~id~~~~~~ 344 (432)
++++|++++|+.|+ .+...|... ++.|-.+|++.++.
T Consensus 1 ~V~vYtt~~c~~c~~kk~c~~aK~lL~~k--------gV~feEidI~~d~~ 43 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIKKKQQDVLGFLEAN--------KIGFEEKDIAANEE 43 (121)
T ss_dssp CEEEEECTTCSCHHHHHHHHHHHHHHHHT--------TCCEEEEECTTCHH
T ss_pred CEEEEecCCCCCccchHHHHHHHHHHHHC--------CCceEEEECCCCHH
Confidence 47889999999994 333333322 68899999987644
No 486
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=91.34 E-value=0.45 Score=40.42 Aligned_cols=44 Identities=11% Similarity=0.051 Sum_probs=37.6
Q ss_pred CCcEEEEEe-CCCChhhhhhHHHHHHHHHHhcCCCCEEEEEEeCCC
Q 013976 297 SKDVLLEIY-APWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTT 341 (432)
Q Consensus 297 ~~~~lv~f~-~~~c~~c~~~~~~~~~la~~~~~~~~~~~~~id~~~ 341 (432)
++.+|++|| +.||..|..-...|.++...|+.. ++.+.-|.++.
T Consensus 52 GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~-g~~vigiS~Ds 96 (216)
T 3sbc_A 52 GKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQ-GAQVLFASTDS 96 (216)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHT-TEEEEEEESSC
T ss_pred CCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccC-CceEEEeecCc
Confidence 578888999 899999999999999999999864 67888788764
No 487
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=91.13 E-value=0.3 Score=33.19 Aligned_cols=71 Identities=13% Similarity=0.145 Sum_probs=45.5
Q ss_pred eEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEEEEeCCCCceecCCCCCCHH
Q 013976 172 QLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLD 250 (432)
Q Consensus 172 ~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~~~~~ 250 (432)
+++|+.+| +.|+...+.++++ .+.|..+|.+........++.+|+... |++++ ++ .. -+..+.+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~------~i~~~~~di~~~~~~~~~~~~~~~~~v--P~l~~--~g--~~---~~g~~~~ 67 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA------GLAYNTVDISLDDEARDYVMALGYVQA--PVVEV--DG--EH---WSGFRPE 67 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHTTCBCC--CEEEE--TT--EE---EESCCHH
T ss_pred EEEEeCCCChHHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHcCCCcc--CEEEE--CC--eE---EcCCCHH
Confidence 45666777 8999998887764 266778888763211122236787766 99864 22 22 2346788
Q ss_pred HHHHHHH
Q 013976 251 KIKTFGE 257 (432)
Q Consensus 251 ~i~~fi~ 257 (432)
.|.++++
T Consensus 68 ~l~~~l~ 74 (75)
T 1r7h_A 68 RIKQLQA 74 (75)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 8888763
No 488
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=91.07 E-value=0.32 Score=40.39 Aligned_cols=42 Identities=7% Similarity=0.379 Sum_probs=34.0
Q ss_pred CCcEEEEEeCCCChhhhhhHHHH-HHHHHHhcCCCCEEEEEEeCC
Q 013976 297 SKDVLLEIYAPWCGHCQAFEPTY-NKLAKHLRGVDSIVIAKMDGT 340 (432)
Q Consensus 297 ~~~~lv~f~~~~c~~c~~~~~~~-~~la~~~~~~~~~~~~~id~~ 340 (432)
.+.++|.|+..+|++|..+.+.+ .++.+.+.. ++.+..+...
T Consensus 17 ~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~--~v~~~~~~l~ 59 (195)
T 3c7m_A 17 ADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKD--IVAFTPFHLE 59 (195)
T ss_dssp CTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTT--TCEEEEEECT
T ss_pred CCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCC--ceEEEEEecC
Confidence 45688889999999999999999 999988875 4666666544
No 489
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=91.04 E-value=0.58 Score=40.01 Aligned_cols=95 Identities=12% Similarity=0.124 Sum_probs=62.8
Q ss_pred CCCcceEEEE-EeC-cchhhhHHHHHHHHHhccC-ceEEEEEecCCccc-------------------------ccchhh
Q 013976 167 SPIKNQLLLF-AVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNEDV-------------------------GKPVSE 218 (432)
Q Consensus 167 ~~~~~~i~~~-~~~-~~~~~~~~~~~~~a~~~~~-~i~f~~vd~~~~~~-------------------------~~~l~~ 218 (432)
.+++++|.|| +.| +.|....+.|.++.++|++ .+.++.|..+.... ...+.+
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 134 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISK 134 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHHH
Confidence 3556777788 888 8999999999999999863 47777776543110 123445
Q ss_pred hhCCC---CCCCcEEEEEeCCCCceecCCC----CCCHHHHHHHHHHHhc
Q 013976 219 YFGIT---GEAPKVLAYTGNDDAKKHILDG----ELTLDKIKTFGEDFLE 261 (432)
Q Consensus 219 ~~~i~---~~~~P~i~i~~~~~~~~y~~~~----~~~~~~i~~fi~~~~~ 261 (432)
.||+. +...|+.++++.+....+...| ..+.+.+.+.|+.+..
T Consensus 135 ~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L~~ 184 (221)
T 2c0d_A 135 NYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSIIH 184 (221)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHH
T ss_pred HcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 56663 1124888888766544444322 3578889988888653
No 490
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=91.00 E-value=0.43 Score=38.15 Aligned_cols=79 Identities=10% Similarity=-0.005 Sum_probs=45.4
Q ss_pred ceEE-EE-EeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcc------------------cccchhhhhCCCCCC---
Q 013976 171 NQLL-LF-AVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNED------------------VGKPVSEYFGITGEA--- 226 (432)
Q Consensus 171 ~~i~-~~-~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~------------------~~~~l~~~~~i~~~~--- 226 (432)
++++ || +.| +.|....+.|.++.++|+++-.++.|.++..+ ....+.+.||+...+
T Consensus 37 ~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~p~~g 116 (159)
T 2a4v_A 37 VVVFFVYPRASTPGSTRQASGFRDNYQELKEYAAVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKTPLSG 116 (159)
T ss_dssp EEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTCEEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCBSSSSSC
T ss_pred eEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhCCcccccCC
Confidence 3444 44 678 88999999999999998753245555443211 123567778887651
Q ss_pred -CcEEEEEeCCCCceecCCCCCCHH
Q 013976 227 -PKVLAYTGNDDAKKHILDGELTLD 250 (432)
Q Consensus 227 -~P~i~i~~~~~~~~y~~~~~~~~~ 250 (432)
.|+.+++ .++...+.+.|.....
T Consensus 117 ~~~~~~li-~~G~i~~~~~g~~~~~ 140 (159)
T 2a4v_A 117 SIRSHFIF-VDGKLKFKRVKISPEV 140 (159)
T ss_dssp BCCEEEEE-ETTEEEEEEESCCHHH
T ss_pred ccceEEEE-cCCEEEEEEccCCccc
Confidence 1244444 4443445555544333
No 491
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=90.85 E-value=0.43 Score=39.50 Aligned_cols=94 Identities=7% Similarity=-0.097 Sum_probs=59.9
Q ss_pred CCcceEEEEE-eC-cchhhhHHHHHHHHHhccC-ceEEEEEecCCccc----------------------ccchhhhhCC
Q 013976 168 PIKNQLLLFA-VS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNEDV----------------------GKPVSEYFGI 222 (432)
Q Consensus 168 ~~~~~i~~~~-~~-~~~~~~~~~~~~~a~~~~~-~i~f~~vd~~~~~~----------------------~~~l~~~~~i 222 (432)
++++++.||. .| +.|....+.|.++..+|++ .+.++.|..+.... ...+.+.||+
T Consensus 30 Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv 109 (186)
T 1n8j_A 30 GRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDN 109 (186)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTTC
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhCC
Confidence 4455666664 67 8899999999999998874 47777666543210 1223445555
Q ss_pred CC----CCCcEEEEEeCCCCceecCCCC----CCHHHHHHHHHHHhc
Q 013976 223 TG----EAPKVLAYTGNDDAKKHILDGE----LTLDKIKTFGEDFLE 261 (432)
Q Consensus 223 ~~----~~~P~i~i~~~~~~~~y~~~~~----~~~~~i~~fi~~~~~ 261 (432)
.. ...|+.++++.+....+.+.|. .+.+.+.+.++.+..
T Consensus 110 ~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l~~ 156 (186)
T 1n8j_A 110 MREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQY 156 (186)
T ss_dssp EETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred ccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHHH
Confidence 41 1248888887665444444332 368888888888754
No 492
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=90.79 E-value=0.27 Score=42.97 Aligned_cols=86 Identities=10% Similarity=0.026 Sum_probs=60.2
Q ss_pred EEeC-cchhhhHHHHHHHHHhccC-ceEEEEEecCCcc------------------------cccchhhhhCCCC-----
Q 013976 176 FAVS-NDSEKLLPVFEEAAKSFKG-KLIFVYVQMDNED------------------------VGKPVSEYFGITG----- 224 (432)
Q Consensus 176 ~~~~-~~~~~~~~~~~~~a~~~~~-~i~f~~vd~~~~~------------------------~~~~l~~~~~i~~----- 224 (432)
+++| +.|....+.+.+++.+|++ .+.++.|.++... ....+.+.||+..
T Consensus 42 pa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~~ygv~~~~~g~ 121 (249)
T 3a2v_A 42 PADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLLHAESAT 121 (249)
T ss_dssp SCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHHHHTCCCTTCSS
T ss_pred cCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHHHHhCCccccCCC
Confidence 4667 8899999999999999975 4777777775411 1245778889862
Q ss_pred CCCcEEEEEeCCCCceecCCC----CCCHHHHHHHHHHHhc
Q 013976 225 EAPKVLAYTGNDDAKKHILDG----ELTLDKIKTFGEDFLE 261 (432)
Q Consensus 225 ~~~P~i~i~~~~~~~~y~~~~----~~~~~~i~~fi~~~~~ 261 (432)
...|++++++.++...+.+.+ ..+.++|.+.|+.+..
T Consensus 122 ~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~alq~ 162 (249)
T 3a2v_A 122 HTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKL 162 (249)
T ss_dssp SCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred cccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHHHh
Confidence 145988888776544443322 3578999999888653
No 493
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=90.64 E-value=0.087 Score=36.77 Aligned_cols=75 Identities=11% Similarity=0.017 Sum_probs=46.5
Q ss_pred eEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCCCCCCCcEEEEEeCCCCceecCCCCCCHH
Q 013976 172 QLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGITGEAPKVLAYTGNDDAKKHILDGELTLD 250 (432)
Q Consensus 172 ~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i~~~~~P~i~i~~~~~~~~y~~~~~~~~~ 250 (432)
+++|+.+| +.|+...+.+.+. .+.|..+|++........+..+|+... |+++ . ++ .. -+..+.+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~------~i~~~~vdi~~~~~~~~~~~~~g~~~v--P~~~-~-~g--~~---~~g~~~~ 67 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR------GFDFEMINVDRVPEAAEALRAQGFRQL--PVVI-A-GD--LS---WSGFRPD 67 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHTTCCSS--CEEE-E-TT--EE---EESCCHH
T ss_pred EEEEcCCCChhHHHHHHHHHHC------CCCeEEEECCCCHHHHHHHHHhCCCcc--CEEE-E-CC--EE---EecCCHH
Confidence 45677788 8999998888763 266778898763211222335788766 9984 3 22 22 2346777
Q ss_pred HHHHHHHHHhc
Q 013976 251 KIKTFGEDFLE 261 (432)
Q Consensus 251 ~i~~fi~~~~~ 261 (432)
.|.++++.+.+
T Consensus 68 ~l~~~l~~~~~ 78 (81)
T 1h75_A 68 MINRLHPAPHA 78 (81)
T ss_dssp HHGGGSCCC--
T ss_pred HHHHHHhcccc
Confidence 77777765443
No 494
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=90.17 E-value=0.52 Score=39.13 Aligned_cols=40 Identities=13% Similarity=0.098 Sum_probs=32.9
Q ss_pred CCcceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEec
Q 013976 168 PIKNQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQM 207 (432)
Q Consensus 168 ~~~~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~ 207 (432)
+...++.|+..+ +.|..+.+.+.++.+++.+++.|..+..
T Consensus 25 ~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 65 (192)
T 3h93_A 25 GKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLPA 65 (192)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEEC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHhCCCCeEEEEEeh
Confidence 334567777778 9999999999999999998888887665
No 495
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=89.66 E-value=0.69 Score=37.29 Aligned_cols=89 Identities=12% Similarity=0.070 Sum_probs=50.9
Q ss_pred CCcceEEEE-EeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchh--------------------hhhCCCCC
Q 013976 168 PIKNQLLLF-AVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVS--------------------EYFGITGE 225 (432)
Q Consensus 168 ~~~~~i~~~-~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~--------------------~~~~i~~~ 225 (432)
+++.++.|| +.| +.|....+.+.++..+ . .+.++.+..+..+....++ +.||+...
T Consensus 46 Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~-~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~ 123 (166)
T 3p7x_A 46 GKKKLISVVPSIDTGVCDQQTRKFNSDASK-E-EGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVME 123 (166)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHSCT-T-TSEEEEEESSCHHHHHHHHHHHTCSSCEEEECTTTCHHHHHHTCEET
T ss_pred CCcEEEEEECCCCCCccHHHHHHHHHHhhc-C-CCEEEEEECCCHHHHHHHHHHcCCCceEEccCCchhHHHHHhCCccc
Confidence 445566666 556 7899988888888877 3 3666666555422122333 44444320
Q ss_pred ----CCcEEEEEeCCCCceec-----CCCCCCHHHHHHHHHH
Q 013976 226 ----APKVLAYTGNDDAKKHI-----LDGELTLDKIKTFGED 258 (432)
Q Consensus 226 ----~~P~i~i~~~~~~~~y~-----~~~~~~~~~i~~fi~~ 258 (432)
..|+.++++.++...+. ..+..+.+.+.+.++.
T Consensus 124 ~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 124 ELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp TTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred cCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 14777777665543333 2234566777766653
No 496
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=89.62 E-value=0.22 Score=36.74 Aligned_cols=57 Identities=5% Similarity=0.027 Sum_probs=39.9
Q ss_pred ceEEEEEeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcc----cccchhhhhCCCCCCCcEEEE
Q 013976 171 NQLLLFAVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNED----VGKPVSEYFGITGEAPKVLAY 232 (432)
Q Consensus 171 ~~i~~~~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~----~~~~l~~~~~i~~~~~P~i~i 232 (432)
.+++|+.+| +.|+.+.+.+.+++..+.+ |..+|++... ....+.+.+|+... |++++
T Consensus 13 ~v~~f~~~~C~~C~~~~~~L~~~~~~~~~---~~~vdi~~~~~~~~~~~~l~~~~g~~~v--P~i~~ 74 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKTQELLSQLPFKEGL---LEFVDITATSDTNEIQDYLQQLTGARTV--PRVFI 74 (105)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHSCBCTTS---EEEEEGGGSTTHHHHHHHHHHHHSCCCS--CEEEE
T ss_pred CEEEEEcCCCHhHHHHHHHHHHcCCCCCc---cEEEEccCCCCHHHHHHHHHHHhCCCCc--CeEEE
Confidence 367778888 9999999999988776653 5556766531 01246677888776 99844
No 497
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=89.13 E-value=0.4 Score=38.73 Aligned_cols=54 Identities=15% Similarity=0.190 Sum_probs=37.5
Q ss_pred CCcceEEEE-EeC-cchhhhHHHHHHHHHhccCceEEEEEecCCcccccchhhhhCC
Q 013976 168 PIKNQLLLF-AVS-NDSEKLLPVFEEAAKSFKGKLIFVYVQMDNEDVGKPVSEYFGI 222 (432)
Q Consensus 168 ~~~~~i~~~-~~~-~~~~~~~~~~~~~a~~~~~~i~f~~vd~~~~~~~~~l~~~~~i 222 (432)
+++.++.|| +.| +.|....+.+.++..+| ..+.++.|..+.......+++.+++
T Consensus 43 gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~ 98 (165)
T 1q98_A 43 SKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-SNTIVLCISADLPFAQARFCGAEGI 98 (165)
T ss_dssp TSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-TTEEEEEEESSCHHHHTTCTTTTTC
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 445566666 678 89999999999999999 6688888877653212233444444
No 498
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=88.73 E-value=1.1 Score=36.20 Aligned_cols=94 Identities=7% Similarity=-0.066 Sum_probs=60.3
Q ss_pred CCcceEEEEEeC-c-chhhhHHHHHHHHHhcc---CceEEEEEecCCcc----------------------------ccc
Q 013976 168 PIKNQLLLFAVS-N-DSEKLLPVFEEAAKSFK---GKLIFVYVQMDNED----------------------------VGK 214 (432)
Q Consensus 168 ~~~~~i~~~~~~-~-~~~~~~~~~~~~a~~~~---~~i~f~~vd~~~~~----------------------------~~~ 214 (432)
++.+++.|+..| + .|....+.+.++.+++. .++.++.+.++..+ ...
T Consensus 28 Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~ 107 (170)
T 3me7_A 28 GKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLF 107 (170)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHHH
T ss_pred CCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHHH
Confidence 566778888888 5 49999999999999985 34666666544100 011
Q ss_pred chhhhhCCCC-------CCCcEEEEEeCCCCceecCCC-CCCHHHHHHHHHHHhc
Q 013976 215 PVSEYFGITG-------EAPKVLAYTGNDDAKKHILDG-ELTLDKIKTFGEDFLE 261 (432)
Q Consensus 215 ~l~~~~~i~~-------~~~P~i~i~~~~~~~~y~~~~-~~~~~~i~~fi~~~~~ 261 (432)
.+++.||+.. ...|++++++.++.....+.| ..+.+.|.+.|.....
T Consensus 108 ~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~~~ 162 (170)
T 3me7_A 108 KLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLARG 162 (170)
T ss_dssp HHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHHTT
T ss_pred HHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHhhc
Confidence 2344444321 123667777766544444445 4789999999988764
No 499
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=88.55 E-value=0.85 Score=38.32 Aligned_cols=44 Identities=14% Similarity=0.248 Sum_probs=34.3
Q ss_pred CCcEEEEEeCCCChhhhhhHHHH-HHHHHHhcCCCCEEEEEEeCC
Q 013976 297 SKDVLLEIYAPWCGHCQAFEPTY-NKLAKHLRGVDSIVIAKMDGT 340 (432)
Q Consensus 297 ~~~~lv~f~~~~c~~c~~~~~~~-~~la~~~~~~~~~~~~~id~~ 340 (432)
.+..|+.|....|++|..+.+.+ ..+.+.|.+..++.|...+.-
T Consensus 29 a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~p 73 (202)
T 3gha_A 29 APVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVM 73 (202)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEECC
T ss_pred CCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEecC
Confidence 35689999999999999998875 567677754447888887754
No 500
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.04 E-value=2.2 Score=34.94 Aligned_cols=90 Identities=8% Similarity=0.023 Sum_probs=56.0
Q ss_pred CCcceEEEEEeC-cchhhhHHHH---HHHHHhccCceEEEEEecCCccccc-------------chh---hhhCCCCCCC
Q 013976 168 PIKNQLLLFAVS-NDSEKLLPVF---EEAAKSFKGKLIFVYVQMDNEDVGK-------------PVS---EYFGITGEAP 227 (432)
Q Consensus 168 ~~~~~i~~~~~~-~~~~~~~~~~---~~~a~~~~~~i~f~~vd~~~~~~~~-------------~l~---~~~~i~~~~~ 227 (432)
++..+|++..++ .+|..+.... .++..-++.++.+...|....+ ++ .++ +.++++.+
T Consensus 55 ~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~nfV~w~~dv~~~e-~~~~~~~~~~~~~g~~~a~~~~~~~~~~~-- 131 (178)
T 2ec4_A 55 RKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKDS-NRARFLTMCNRHFGSVVAQTIRTQKTDQF-- 131 (178)
T ss_dssp CCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHHTEEEEEEECCSHH-HHHHHHHHHHHHTCHHHHHHHHHSCSTTC--
T ss_pred CcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHcCEEEEEEeCCCch-hhhhhhhhhhhhhHHHHHHHHhhcCCCCC--
Confidence 333345555566 7777765322 2355555567888888988743 21 233 33778777
Q ss_pred cEEEEEeCCCCc---eecCCCCCCHHHHHHHHHHHh
Q 013976 228 KVLAYTGNDDAK---KHILDGELTLDKIKTFGEDFL 260 (432)
Q Consensus 228 P~i~i~~~~~~~---~y~~~~~~~~~~i~~fi~~~~ 260 (432)
|.++++...... .....|..+.+.+..-+...+
T Consensus 132 P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~ 167 (178)
T 2ec4_A 132 PLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAM 167 (178)
T ss_dssp SEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHH
T ss_pred CeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHH
Confidence 999999755321 244678899988887776654
Done!