Query 013989
Match_columns 432
No_of_seqs 245 out of 1676
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 03:28:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013989.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013989hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fky_A Glutamine synthetase; b 100.0 3.3E-98 1E-102 762.8 31.1 349 62-417 10-358 (370)
2 2d3a_A Glutamine synthetase; l 100.0 4.2E-96 1E-100 744.1 30.9 351 63-416 6-356 (356)
3 2ojw_A Glutamine synthetase; a 100.0 3.4E-93 1.2E-97 729.0 31.9 350 61-416 30-383 (384)
4 3ng0_A Glutamine synthetase; G 100.0 1E-85 3.5E-90 690.1 25.3 327 81-415 17-386 (473)
5 3qaj_A Glutamine synthetase; A 100.0 7.9E-86 2.7E-90 685.5 16.7 320 82-415 19-358 (444)
6 4hpp_A Probable glutamine synt 100.0 2.3E-83 8E-88 666.5 22.8 315 81-415 7-357 (443)
7 1f52_A Glutamine synthetase; A 100.0 1.2E-82 4.1E-87 666.6 26.0 326 81-415 14-382 (468)
8 4acf_A Glutamine synthetase 1; 100.0 6E-82 2.1E-86 664.2 27.4 327 81-415 26-399 (486)
9 2j9i_A Glutamate-ammonia ligas 100.0 1.8E-73 6.3E-78 589.6 11.5 307 77-415 13-344 (421)
10 3o6x_A Glutamine synthetase; t 100.0 5.4E-57 1.8E-61 483.4 16.3 283 115-415 128-500 (729)
11 1r8g_A Hypothetical protein YB 98.2 2.2E-05 7.7E-10 79.3 16.0 131 182-348 10-168 (372)
12 2gwd_A Glutamate cysteine liga 98.0 0.00017 5.7E-09 74.9 17.2 152 165-348 16-213 (449)
13 3ln6_A Glutathione biosynthesi 96.3 0.15 5.2E-06 56.0 18.5 98 248-347 54-194 (750)
14 3ln7_A Glutathione biosynthesi 88.2 2 6.8E-05 47.2 10.5 97 248-346 53-194 (757)
15 1va6_A Glutamate--cysteine lig 80.9 3.7 0.00013 43.1 8.1 38 248-285 56-94 (518)
16 2fao_A Probable ATP-dependent 79.3 15 0.0005 36.1 11.2 126 239-380 111-243 (309)
17 1nxi_A Conserved hypothetical 71.8 9 0.00031 32.7 6.7 90 171-291 22-114 (132)
18 2iru_A Putative DNA ligase-lik 66.7 13 0.00044 36.4 7.3 126 239-380 105-245 (303)
19 3nzt_A Glutamate--cysteine lig 65.0 20 0.00069 37.6 8.9 49 248-296 67-117 (525)
20 1zpv_A ACT domain protein; str 60.8 5.6 0.00019 30.6 3.0 64 232-297 19-82 (91)
21 3ose_A Serine/threonine-protei 41.8 30 0.001 28.8 4.7 63 228-290 39-120 (120)
22 1v5s_A MAP/microtubule affinit 37.4 65 0.0022 27.2 6.1 63 228-290 39-120 (126)
23 1u8s_A Glycine cleavage system 34.3 1.7E+02 0.0059 25.4 8.9 66 230-298 18-83 (192)
24 3tc3_A UV damage endonuclease; 25.3 82 0.0028 30.7 5.3 61 235-301 65-127 (310)
25 2nyi_A Unknown protein; protei 24.8 63 0.0022 28.7 4.1 66 230-298 105-176 (195)
No 1
>3fky_A Glutamine synthetase; beta-grAsp, catalytic domain, acetylation, cytoplasm, ligase, UBL conjugation; HET: FLC; 2.95A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-98 Score=762.81 Aligned_cols=349 Identities=55% Similarity=1.022 Sum_probs=306.6
Q ss_pred HHHHHHhccCCCCCCCeEEEEEEEEeCccccccceEEEEeccCCCCCCCCCccccCCCCCCCCCCCccEEEEEEeccccC
Q 013989 62 NRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDP 141 (432)
Q Consensus 62 ~~~~~~~~~~~~~~~~~v~~~yvwidg~g~Dlrgk~r~~~~p~~~~~~~~~~~fdgss~g~~~~~~~D~~L~PD~~~~~P 141 (432)
..+++||+| +|.++++++|+|+|+.| .+|||++++....+.++++++|+|||||+||.++++||++|+||+++++|
T Consensus 10 ~~~~~~~~l---~~~~i~~v~~~~~D~~G-~lR~K~~~~~~~~~~~~~~~~~~fDGss~g~~~~~~sD~~l~Pdt~~~~P 85 (370)
T 3fky_A 10 QILQKYLEL---DQRGRIIAEYVWIDGTG-NLRSKGRTLKKRITSIDQLPEWNFDGSSTNQAPGHDSDIYLKPVAYYPDP 85 (370)
T ss_dssp --------------CCCEEEEEEEECSSS-CEEEEEEEESSCCCSGGGSCCEEECGGGTTSSCCCC--EEEEEEEEEECT
T ss_pred HHHHHHhCc---ccCCeEEEEEEEEcCCC-CeEEEEEECccccchHHhCCccccCCcccccccCCCCCeeEeeeEEEEcC
Confidence 456677777 68999999999999999 69999999988888888889999999999999999999999999999999
Q ss_pred CCCCCeEEEEEEEecCCCCcCCCCHHHHHHHHHHhhccCccccEEEeeeeEEEeccCCCCCCCCCCCCCCCCCCCccccc
Q 013989 142 FRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGA 221 (432)
Q Consensus 142 ~~~~~~a~Vlcd~~~~dG~P~~~~pR~~Lk~~l~~l~~~G~~~~~G~E~EF~L~~~~~~~~~g~p~~~~p~~~g~yy~~~ 221 (432)
|+++++++|+||++++||+|++.|||++|+|++++++ |+++++|+|+|||||+.+ ..+.+||.+++|.++|+|||..
T Consensus 86 w~~~~~a~vlcd~~~~dG~P~~~~pR~iLkr~~~~~~--g~~~~~G~E~EF~Lf~~~-~~~~~~p~~~~p~~~g~yy~~~ 162 (370)
T 3fky_A 86 FRRGDNIVVLAACYNNDGTPNKFNHRHEAAKLFAAHK--DEEIWFGLEQEYTLFDMY-DDVYGWPKGGYPAPQGPYYCGV 162 (370)
T ss_dssp TTCTTCEEEEEEEECTTSSBCTTCCHHHHHHHHHHTG--GGCCEEEEEEEEEEECTT-SSBTTCCTTSBCSCSSSCTTCC
T ss_pred CCCCCeEEEEEEEEcCCCCCCCCCHHHHHHHHHHHhc--CCCceEEeeeEEEEEccC-CCcccCCCCCccCCCCcccccc
Confidence 9997799999999999999999999999999999875 999999999999999987 3477999888999999999988
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCceeeecCCCCCCcEEEEecCChHHHHhHHHHHHHHHHHHHHHHcCcEEeecccccCC
Q 013989 222 GADKSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEG 301 (432)
Q Consensus 222 ~~~~~~~~~i~~~i~~al~~~GI~ie~~h~E~gpGQ~Ei~l~p~~~l~aaD~l~~~R~~ik~VA~~~Gl~aTFmPKP~~~ 301 (432)
+.+..+.++++++|+++|+++||+|+++|||+|||||||++.|++++++||+++++|++||+||++||+.|||||||+.|
T Consensus 163 ~~~~~~~~~i~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~~~~~~~l~aAD~~~~~K~~vk~vA~~~G~~ATFmpKP~~g 242 (370)
T 3fky_A 163 GAGKVYARDMIEAHYRACLYAGLEISGINAEVMPSQWEFQVGPCTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPLKG 242 (370)
T ss_dssp STTTCSCHHHHHHHHHHHHHHTCCEEEEEECSSTTEEEEEEEEEETHHHHHHHHHHHHHHHHHHHTTTCEEECCSCSSSS
T ss_pred chhhHHHHHHHHHHHHHHHHcCCCeeeeecCcCCCceEEecCCCCHHHHHHHHHHHHHHHHHHHHHhCcEEEEcccccCC
Confidence 87776779999999999999999999999999999999999999999999999999999999999999999999999995
Q ss_pred CCCCceeeeeeccccccCCCchHHHHHHHHHHHHhHHHHhhcccccccccCCCCCCCCCCCceeeccCCCcceeeecccC
Q 013989 302 DWNGAGCHTNYSTKSMREEGGYETIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASIDSFSWGVANRGCSIRVGRET 381 (432)
Q Consensus 302 ~~~GsG~H~H~Sl~~~~~~~g~~~~~~~iaGl~L~H~~al~a~~~nsYkRL~~~~~ap~~~~~sWG~~NR~a~IRvp~~~ 381 (432)
+|+|||||+|+|||++++++|++.+++||+||.++|+++|++|+.||||||+|++|||++.+++||++||+|+||||...
T Consensus 243 d~~GSG~H~H~Sl~~~~~~~g~~~~~~~i~gl~~~h~~~i~a~~~nSYkRL~~~~eap~~~~~sWG~~NRsa~iRIp~~~ 322 (370)
T 3fky_A 243 DWNGAGCHANVSTKEMRQPGGTKYIEQAIEKLSKRHAEHIKLYGSDNDMRLTGRHETASMTAFSSGVANRGSSIRIPRSV 322 (370)
T ss_dssp SSCCCBEEEEEECHHHHSSSTHHHHHHHHHHHHHTHHHHHHSSCTTGGGC--------CCSCCCEEESCTTSSEEECHHH
T ss_pred CCCcccceeeeccccccCCCCHHHHHHHHHHHHHHhHHHHHHHccchhhhcCCCccCCCcccceEecCCCceeEEecCCC
Confidence 57999999999999877678899999999999449999999999999999999999999667999999999999999765
Q ss_pred CCCCccEEEecCCCCCCCHHHHHHHHHHHhhcCCCC
Q 013989 382 EKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEPT 417 (432)
Q Consensus 382 ~~~~~~r~E~R~pda~aNPYLalAailaagl~G~~~ 417 (432)
...+++|||+|+||++|||||++|+||+|||+|+++
T Consensus 323 ~~~~~~riE~R~pda~aNPYLa~Aailaagl~Gi~~ 358 (370)
T 3fky_A 323 AKEGYGYFEDRRPASNIDPYLVTGIMCETVCGAIDN 358 (370)
T ss_dssp HHHTCCCEEECCCBTTCCHHHHHHHHHHHHHCCBTT
T ss_pred CCCCCCEEEECCCCCCCCHHHHHHHHHHHHhcCccc
Confidence 432356999999999999999999999999999964
No 2
>2d3a_A Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A*
Probab=100.00 E-value=4.2e-96 Score=744.08 Aligned_cols=351 Identities=78% Similarity=1.388 Sum_probs=322.4
Q ss_pred HHHHHhccCCCCCCCeEEEEEEEEeCccccccceEEEEeccCCCCCCCCCccccCCCCCCCCCCCccEEEEEEeccccCC
Q 013989 63 RLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPF 142 (432)
Q Consensus 63 ~~~~~~~~~~~~~~~~v~~~yvwidg~g~Dlrgk~r~~~~p~~~~~~~~~~~fdgss~g~~~~~~~D~~L~PD~~~~~P~ 142 (432)
.+.+ |+|. +|.++++++|+|+|+.|+|+|||++++..+.+.++++++|+|||||+++..++++|++|+||+++++||
T Consensus 6 ~~~~-~~~~--~~~~~~~v~~~~vD~~g~~~r~k~~~~~~~~~~~~~~~g~~fdgss~~~~~~~~sD~~l~PDt~~~~P~ 82 (356)
T 2d3a_A 6 DLVN-LNLS--DTTEKIIAEYIWIGGSGMDLRSKARTLPGPVTDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPF 82 (356)
T ss_dssp HHHT-CCGG--GTCSCEEEEEEEECTTSSCEEEEEEEESSCCCCGGGSCCEEEEGGGTTSSCSSSCEEEEEEEEEEECTT
T ss_pred hhhc-cCCC--CCCCeEEEEEEEEcCCCCcccceEEECCcchhhHhhcCcceecccccccccCcCCcEEEEEEEEEECCc
Confidence 3434 5662 478999999999999999999999999999999988899999999999988889999999999999999
Q ss_pred CCCCeEEEEEEEecCCCCcCCCCHHHHHHHHHHhhccCccccEEEeeeeEEEeccCCCCCCCCCCCCCCCCCCCcccccc
Q 013989 143 RGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAG 222 (432)
Q Consensus 143 ~~~~~a~Vlcd~~~~dG~P~~~~pR~~Lk~~l~~l~~~G~~~~~G~E~EF~L~~~~~~~~~g~p~~~~p~~~g~yy~~~~ 222 (432)
+++++++|+||++++||+|++.|||++|+|+++++++.|+++++|+|+|||||+.+.+.+.+|+..+.|.++|+||+..+
T Consensus 83 ~~~~~a~v~cd~~~~dG~P~~~~pR~iLkr~~~~~~~~g~~~~~G~E~EF~lf~~~~~~~~~~~~~g~p~~~g~y~~~~~ 162 (356)
T 2d3a_A 83 RRGNNILVMCDCYTPAGEPIPTNKRYSAAKIFSSPEVAAEEPWYGIEQEYTLLQKDTNWPLGWPIGGFPGPQGPYYCGIG 162 (356)
T ss_dssp TCTTCEEEEEEEECTTSCBCTTCCHHHHHHHHHSHHHHHHCCEEEEEEEEEEEETTTCCBTTSCTTSBCSCSSSCTTCCS
T ss_pred CCCCceEEEEEEECCCCCCCCCCHHHHHHHHHHHHHhcCCeeEEecceEEEEEecCCCcccccccCCCCCCCCCcCcCcc
Confidence 98679999999999999999999999999999999889999999999999999976556678887778889999999988
Q ss_pred cChhhHHHHHHHHHHHHHHcCCceeeecCCCCCCcEEEEecCChHHHHhHHHHHHHHHHHHHHHHcCcEEeecccccCCC
Q 013989 223 ADKSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGD 302 (432)
Q Consensus 223 ~~~~~~~~i~~~i~~al~~~GI~ie~~h~E~gpGQ~Ei~l~p~~~l~aaD~l~~~R~~ik~VA~~~Gl~aTFmPKP~~~~ 302 (432)
.++.+.++++++|+++|+++||+||++|||+|||||||+++|++++++||+++++|++||+||++||++|||||||+.++
T Consensus 163 ~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pgQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA~~~G~~aTFmpKP~~~d 242 (356)
T 2d3a_A 163 AEKSFGRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISSGDQVWVARYILERITEIAGVVVTFDPKPIPGD 242 (356)
T ss_dssp TTTCCCHHHHHHHHHHHHHHTCCEEEEEECSSTTEEEEEEEEEETHHHHHHHHHHHHHHHHHHHHHTEEEECCSCSSCSS
T ss_pred cchHHHHHHHHHHHHHHHHCCCCEEEeecCcCCCceEEecCCCCHHHHHHHHHHHHHHHHHHHHHhCCEEEECCCccCCC
Confidence 87767799999999999999999999999999999999999999999999999999999999999999999999999744
Q ss_pred CCCceeeeeeccccccCCCchHHHHHHHHHHHHhHHHHhhcccccccccCCCCCCCCCCCceeeccCCCcceeeecccCC
Q 013989 303 WNGAGCHTNYSTKSMREEGGYETIKKAILNLSLRHKEHISAYGEGNERRLTGKHETASIDSFSWGVANRGCSIRVGRETE 382 (432)
Q Consensus 303 ~~GsG~H~H~Sl~~~~~~~g~~~~~~~iaGl~L~H~~al~a~~~nsYkRL~~~~~ap~~~~~sWG~~NR~a~IRvp~~~~ 382 (432)
++|||||+|+||++.++++|.+.+.+++.+++++|+++|+||+.||||||+|++|||++.+++||.+||+|+||||....
T Consensus 243 ~~GSG~H~H~Sl~~~~~~~g~~~f~~~~~~l~l~h~~~l~a~~~nSYkRL~pg~eap~~~~~swG~~NRsa~iRIp~~~~ 322 (356)
T 2d3a_A 243 WNGAGAHTNYSTESMRKEGGYEVIKAAIEKLKLRHKEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASVRVGRETE 322 (356)
T ss_dssp SCCCBEEEEEECTTTSSTTHHHHHHHHHHHHHHTHHHHHTTSCTTHHHHCSSSSSCCCTTCCCEESSCTTSSEECCHHHH
T ss_pred CCCCcceEEechhhhccCCCHHHHHHHHHHHHHHHHHHHHhHccChHHHccCCccCCCcceeEEeccCCeeeEEEccCCC
Confidence 79999999999988655568899988888888999999999999999999999999987799999999999999997542
Q ss_pred CCCccEEEecCCCCCCCHHHHHHHHHHHhhcCCC
Q 013989 383 KQGKGYLEDRRPASNMDPYVVTSLLAETTILWEP 416 (432)
Q Consensus 383 ~~~~~r~E~R~pda~aNPYLalAailaagl~G~~ 416 (432)
.++++|||+|+||++|||||++||+|+||++++|
T Consensus 323 ~~~~~riE~R~pd~~aNPYLa~Aailaagl~~~~ 356 (356)
T 2d3a_A 323 QNGKGYFEDRRPASNMDPYVVTSMIAETTIVWKP 356 (356)
T ss_dssp HTTCCCEEECCCBTTCCHHHHHHHHHHHHTTCC-
T ss_pred CCCCCEEEEcCCCCCCCHHHHHHHHHHHhcCCCC
Confidence 2346799999999999999999999999998865
No 3
>2ojw_A Glutamine synthetase; amino-acid biosynthesis, ligase, structural GENO structural genomics consortium, SGC; HET: ADP; 2.05A {Homo sapiens} PDB: 2qc8_A* 2uu7_A
Probab=100.00 E-value=3.4e-93 Score=729.03 Aligned_cols=350 Identities=53% Similarity=0.993 Sum_probs=312.5
Q ss_pred HHHHHHHhccCCCCCCCeEEEEEEEEeCccccccceEEEEeccCCCCCCCCCccccCCCCCCCCCCCccEEEEEEecccc
Q 013989 61 VNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKD 140 (432)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~v~~~yvwidg~g~Dlrgk~r~~~~p~~~~~~~~~~~fdgss~g~~~~~~~D~~L~PD~~~~~ 140 (432)
-+.|++||++ ++.++++++|+|+|+.|..+|||++++....+.++++++|+||||++++..++++|++|+||+++++
T Consensus 30 ~~~l~~~l~~---~~~~~~~v~~~~~D~~G~~~R~K~ip~~~~~~~~~~~p~~~~dgss~~~~~~~~sD~~l~PDt~~~~ 106 (384)
T 2ojw_A 30 KGIKQVYMSL---PQGEKVQAMYIWIDGTGEGLRCKTRTLDSEPKCVEELPEWNFDGSSTLQSEGSNSDMYLVPAAMFRD 106 (384)
T ss_dssp HHHHHHHHTS---CCCSCEEEEEEEECTTSSCEEEEEEEESSCCSSGGGSCCEEEEGGGTTSSBTTBCEEEEEEEEEEEC
T ss_pred HHHHHHHHhC---CCCCcEEEEEEEECCCCCeeeEEEEEHHHhhhhHhhCccccccCcccccccCCCCcEEEEeeEEEEC
Confidence 4678888988 5788999999999988844888887777666666777899999999998888899999999999999
Q ss_pred CCCCCCeEEEEEEEecCCCCcCCCCHHHHHHHHHHhhccCccccEEEeeeeEEEeccCCCCCCCCCCCCCCCCCCCcccc
Q 013989 141 PFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCG 220 (432)
Q Consensus 141 P~~~~~~a~Vlcd~~~~dG~P~~~~pR~~Lk~~l~~l~~~G~~~~~G~E~EF~L~~~~~~~~~g~p~~~~p~~~g~yy~~ 220 (432)
||+++++++|+||++++||+|++.|||++|+|++++++ |+++++|+|+|||||+.+. .+.+|+.+++|.++|+||+.
T Consensus 107 Pw~~~~~a~v~cd~~~~dG~P~~~~pR~iLkr~~~~~~--g~~~~~G~E~EF~Lf~~~~-~~~~~~~~g~p~~~g~y~~~ 183 (384)
T 2ojw_A 107 PFRKDPNKLVLCEVFKYNRRPAETNLRHTCKRIMDMVS--NQHPWFGMEQEYTLMGTDG-HPFGWPSNGFPGPQGPYYCG 183 (384)
T ss_dssp TTTCTTCEEEEEEEECTTSCBCTTCCHHHHHHHHHHTG--GGCCEEEEEEEEEEEC-CC-SBTTCCTTSCCSCSSSCTTC
T ss_pred CCCCCCeEEEEEEEECCCCCCCCcCHHHHHHHHHHHHh--CCEEEEEeeeEEEEEccCC-CcccccCCCccCCCCCCCcc
Confidence 99986799999999999999999999999999999986 8999999999999998763 35588877789999999998
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCceeeecCCCCCCcEEEEecCChHHHHhHHHHHHHHHHHHHHHHcCcEEeecccccC
Q 013989 221 AGADKSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIE 300 (432)
Q Consensus 221 ~~~~~~~~~~i~~~i~~al~~~GI~ie~~h~E~gpGQ~Ei~l~p~~~l~aaD~l~~~R~~ik~VA~~~Gl~aTFmPKP~~ 300 (432)
.+.++.+.++++++|+++|+++||+||++|+|+|||||||+++|++++++||+++++|++||+||++||+.|||||||+.
T Consensus 184 ~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pgQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA~~~Gl~aTFmpKP~~ 263 (384)
T 2ojw_A 184 VGADRAYGRDIVEAHYRACLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILHRVCEDFGVIATFDPKPIP 263 (384)
T ss_dssp CSTTTCCCHHHHHHHHHHHHHHTCCEEEEEECSSTTEEEEEEEEEETTHHHHHHHHHHHHHHHHHHHHTCEEECCSCSSC
T ss_pred cccchHHHHHHHHHHHHHHHHCCCCeEeeecCCCCcceEEEcCCCcHHHHHHHHHHHHHHHHHHHHHhCCEEEEeccccC
Confidence 88776677999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCceeeeeeccccccCCCchHHHHHHHHHHHHhHHHHhhcc----cccccccCCCCCCCCCCCceeeccCCCcceee
Q 013989 301 GDWNGAGCHTNYSTKSMREEGGYETIKKAILNLSLRHKEHISAY----GEGNERRLTGKHETASIDSFSWGVANRGCSIR 376 (432)
Q Consensus 301 ~~~~GsG~H~H~Sl~~~~~~~g~~~~~~~iaGl~L~H~~al~a~----~~nsYkRL~~~~~ap~~~~~sWG~~NR~a~IR 376 (432)
++++|||||+|+||+++++++|.+.++++++|++++|+++|++| +.||||||+|++|||++.+++||++||+|+||
T Consensus 264 ~d~~GSG~H~H~Sl~~~~~~~g~n~f~~~~~gl~~~h~~~i~a~~p~~~~nsykRL~pg~ea~~~~~~sWG~~NRsa~iR 343 (384)
T 2ojw_A 264 GNWNGAGCHTNFSTKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANRSASIR 343 (384)
T ss_dssp SSSCCCBEEEEEECHHHHSTTTHHHHHHHHHHHHTCHHHHHHHSSTTTTTTGGGTCC-----CCTTCCCEEETCTTSSEE
T ss_pred CCCCCCeeeEEeehhhhcCCCchhHHHHHHHHHHHHHHHHheEeccCCCCCchhhccCCcccCCCceEEeecccCCceEE
Confidence 76799999999999876555689999999999989999999999 46999999999999998899999999999999
Q ss_pred ecccCCCCCccEEEecCCCCCCCHHHHHHHHHHHhhcCCC
Q 013989 377 VGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEP 416 (432)
Q Consensus 377 vp~~~~~~~~~r~E~R~pda~aNPYLalAailaagl~G~~ 416 (432)
||......+++|||+|+||++|||||++|++|+|||++++
T Consensus 344 Ip~~~~~~~~~riE~R~pd~~aNPYLa~Aailaagl~~~~ 383 (384)
T 2ojw_A 344 IPRTVGQEKKGYFEDRRPSANCDPFSVTEALIRTCLLNET 383 (384)
T ss_dssp ECHHHHHHTCSCEEECCCBTTCCHHHHHHHHHHHHTSCCC
T ss_pred eecCCCCCCCCEEEEcCCCCCCCHHHHHHHHHHHhcCCCC
Confidence 9975432245799999999999999999999999998865
No 4
>3ng0_A Glutamine synthetase; GSI, nitrogen metabolism, synec ligase; HET: ANP; 2.80A {Synechocystis SP}
Probab=100.00 E-value=1e-85 Score=690.14 Aligned_cols=327 Identities=23% Similarity=0.307 Sum_probs=287.0
Q ss_pred EEEEEEeCccccccceEEEEeccCCCCCC-C--CCccccCCCC-CCCCCCCccEEEEEEe--ccccCCCCCCeEEEEEEE
Q 013989 81 AEYIWIGGTGIDMRSKSKTISKPVEHPSE-L--PKWNYDGSST-GQAPGEDSEVILYPQA--IFKDPFRGGNNILVICDT 154 (432)
Q Consensus 81 ~~yvwidg~g~Dlrgk~r~~~~p~~~~~~-~--~~~~fdgss~-g~~~~~~~D~~L~PD~--~~~~P~~~~~~a~Vlcd~ 154 (432)
++||++. ++|+.|+.|++.+|++.+++ + .|++||||++ |+..++++|++|+||+ ++++||+++++++|+||+
T Consensus 17 i~~V~l~--f~D~~G~~r~k~ip~~~~~~~~~~~G~~fdgss~~g~~~~~~sD~~l~PD~~T~~~~Pw~~~~~a~v~cd~ 94 (473)
T 3ng0_A 17 IKIIDLK--FIDTPGIWQHCSFYYDQLDENSFTEGIPFDGSSIRGWKAINESDMCMVPDPNTATIDPFCKEPTLSMICSI 94 (473)
T ss_dssp CCEEEEE--EECSSSCEEEEEEEGGGCCGGGGTTCEEEETTSSTTSCCGGGCEEEEEECGGGCEECTTCSSCEEEEEEEE
T ss_pred CCEEEEE--EECCCCCEEEEEEeHHHHHHHHHhCCCccccccccccccCCCCcEEEEeecCccEECCcCCCCcEEEEEEE
Confidence 3455454 66788999999999999987 4 4799999999 8888789999999996 999999987799999999
Q ss_pred ecC-CCCcCCCCHHHHHHHHHHhhccCcc--ccEEEeeeeEEEeccCC-------------CCCCCCCC---------CC
Q 013989 155 YTP-AGEPIPTNKRHRAAEIFSNSKVSAE--VPWFGIEQEYTLLQQNV-------------KWPLGWPV---------GA 209 (432)
Q Consensus 155 ~~~-dG~P~~~~pR~~Lk~~l~~l~~~G~--~~~~G~E~EF~L~~~~~-------------~~~~g~p~---------~~ 209 (432)
+++ ||+|++.|||++|+++++++++.|+ ++++|+|+|||||+.+. ..+.+|+. ++
T Consensus 95 ~~~~~g~p~~~~pR~iLkr~~~~~~~~G~~~~~~~g~E~EF~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 174 (473)
T 3ng0_A 95 KEPRTGEWYNRDPRTIAAKAAEYLRGTGIADTVYFGPEAEFFLFDDIRFGQTENSSYYFADSVEGRWNTGREEEGGNLGY 174 (473)
T ss_dssp ECTTTSSBCTTCHHHHHHHHHHHHHHHTSCSEEEEEEEECEEEESEEEEEECSSCEEEEEECTTCGGGTTCCCTTCCCCC
T ss_pred eECCCCCCCCCChHHHHHHHHHHHHHcCCCcceEEEeeeEEEEEeecccccccccccccccccccccccccccccCCCCc
Confidence 998 9999999999999999999988766 89999999999998521 11223432 23
Q ss_pred CCCCCCCcccccccChhhHHHHHHHHHHHHHHcCCceeeecCCCC-CCcEEEEecCChHHHHhHHHHHHHHHHHHHHHHc
Q 013989 210 YPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEVM-PGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQA 288 (432)
Q Consensus 210 ~p~~~g~yy~~~~~~~~~~~~i~~~i~~al~~~GI~ie~~h~E~g-pGQ~Ei~l~p~~~l~aaD~l~~~R~~ik~VA~~~ 288 (432)
.|.++++||+..+.+. ..+++++|+++|+++||+|+++|||+| ||||||++.|++++++||+++++|++||+||++|
T Consensus 175 ~~~~~~~y~~~~~~d~--~~~~~~~i~~~l~~~Gi~ve~~h~E~~~pGQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA~~~ 252 (473)
T 3ng0_A 175 KPGYKQGYFPVAPTDT--AQDIRTEMLLTMAAFGVPIEKHHHEVASGGQNELGIKFDKLVNSADNLMIYKYVIKNVAKKY 252 (473)
T ss_dssp CCCTTCCSSCCTTTCC--CHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCccccccCccch--hHHHHHHHHHHHHHCCCCeEEeecCcCCCCceEEEccCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 4667889998887776 488999999999999999999999999 9999999999999999999999999999999999
Q ss_pred CcEEeecccccCCCCCCceeeeeecccccc-----CC--Cch-HHHHHHHHHHHHhHHHHhhcccc---cccccCCCCCC
Q 013989 289 GVVLSLDPKPIEGDWNGAGCHTNYSTKSMR-----EE--GGY-ETIKKAILNLSLRHKEHISAYGE---GNERRLTGKHE 357 (432)
Q Consensus 289 Gl~aTFmPKP~~~~~~GsG~H~H~Sl~~~~-----~~--~g~-~~~~~~iaGl~L~H~~al~a~~~---nsYkRL~~~~~ 357 (432)
|++|||||||+.++ +|||||+|+|||+.. ++ .|+ ...++||+|| |+|+++|+||++ ||||||+|++|
T Consensus 253 G~~aTFmpKP~~~~-~GSG~H~H~Sl~~~g~n~F~~~~~~~lS~~~~~fiaGl-L~h~~~l~a~~~Pt~NSYkRL~pg~~ 330 (473)
T 3ng0_A 253 GKTVTFMPKPIFND-NGSGMHVHQSLWKDGQPLFAGDKYAGFSQMGLWYIGGI-LKHAPALLAFTNPTTNSYKRLVPGFE 330 (473)
T ss_dssp TCEEECCSCSSTTS-CCCCEEEEEEEEETTEETTBSSSGGGBCHHHHHHHHHH-HHHHHHHHHHHSCSTTHHHHBBTTTB
T ss_pred CCEEEEcCcccCCC-CCCeeEEEEeeccCCccccCCCCccchhHHHHHHHHHH-HHHHHHHHHHhCCCcchhhcccCCCc
Confidence 99999999999996 999999999998631 11 244 3458999999 999999999985 99999999999
Q ss_pred CCCCCceeeccCCCcceeeecccCCCCCccEEEecCCCCCCCHHHHHHHHHHHhhcCC
Q 013989 358 TASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWE 415 (432)
Q Consensus 358 ap~~~~~sWG~~NR~a~IRvp~~~~~~~~~r~E~R~pda~aNPYLalAailaagl~G~ 415 (432)
||+ +++||.+||+++||||.....++++|||+|+||++|||||++||+|+|||+|+
T Consensus 331 AP~--~~~Wg~~NRsa~iRip~~~~~~~~~RiE~R~pd~~aNPYLa~Aa~LaAGldGI 386 (473)
T 3ng0_A 331 APV--NLAYSQGNRSASVRIPLSGGNPKAKRLEFRCPDATSNPYLAFAAMLCAGIDGI 386 (473)
T ss_dssp CCC--BCCEEESCTTSSEEECCCSSCGGGCCEEECSCCTTSCHHHHHHHHHHHHHHHH
T ss_pred Ccc--ceeeeccCCcCceeeeccCCCCCcceEEeecCCCCCCHHHHHHHHHHHHHHHH
Confidence 998 99999999999999997533445789999999999999999999999999994
No 5
>3qaj_A Glutamine synthetase; AMP-PCP, ACP, ligase; HET: GLU ADP RGP CIT AMP; 3.05A {Bacillus subtilis}
Probab=100.00 E-value=7.9e-86 Score=685.54 Aligned_cols=320 Identities=25% Similarity=0.350 Sum_probs=282.2
Q ss_pred EEEEEeCccccccceEEEEeccCCCCCCC--CCccccCCCC-CCCCCCCccEEEEEEe--ccccCCCCC--CeEEEEEEE
Q 013989 82 EYIWIGGTGIDMRSKSKTISKPVEHPSEL--PKWNYDGSST-GQAPGEDSEVILYPQA--IFKDPFRGG--NNILVICDT 154 (432)
Q Consensus 82 ~yvwidg~g~Dlrgk~r~~~~p~~~~~~~--~~~~fdgss~-g~~~~~~~D~~L~PD~--~~~~P~~~~--~~a~Vlcd~ 154 (432)
+||++. ++|+.|+.|++.+|++.++++ .|++||||++ |+...+++|++|+||+ ++++||+++ ++++|+||+
T Consensus 19 ~~v~l~--~~D~~G~~r~k~ip~~~~~~~~~~G~~fdgssi~g~~~~~~~D~~l~PD~~T~~~~Pw~~~~~~~a~v~cd~ 96 (444)
T 3qaj_A 19 KYIRLQ--FTDILGTIKNVEIPVSQLGKALDNKVMFDGSSIEGFVRIEESDMYLYPDLNTFVIFPWTAEKGKVARFICDI 96 (444)
T ss_dssp CEEEEE--EECSSSCEEEEEEEGGGHHHHHTTCCEEETTTSTTSSCTTCCEEECCBCGGGCEEEHHHHHHHCEEEEEBCC
T ss_pred CEEEEE--EECCCCCEEEEEEeHHHHHHHHhCCccccCccccCccCCCCCCEEEEEecCceEECccccCCCCeEEEEEEE
Confidence 344444 567888999999999998765 4799999999 8888889999999997 999999985 599999999
Q ss_pred ecCCCCcCCCCHHHHHHHHHHhhccCccc-cEEEeeeeEEEeccCCCCCCCCCCCCCCCCCCCcccccccChhhHHHHHH
Q 013989 155 YTPAGEPIPTNKRHRAAEIFSNSKVSAEV-PWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIAD 233 (432)
Q Consensus 155 ~~~dG~P~~~~pR~~Lk~~l~~l~~~G~~-~~~G~E~EF~L~~~~~~~~~g~p~~~~p~~~g~yy~~~~~~~~~~~~i~~ 233 (432)
+++||+|++.|||++|++++++++++|++ +++|+|+|||||+.+.+ |+|. ..+.++++||+..+.+. ..++++
T Consensus 97 ~~~dG~p~~~~pR~iLkr~~~~~~~~G~~~~~~g~E~EF~l~~~~~~---g~~~-~~~~~~~~y~~~~~~d~--~~~~~~ 170 (444)
T 3qaj_A 97 YNPDGTPFEGDPRNNLKRILKEMEDLGFSDFNLGPEPEFFLFKLDEK---GEPT-LELNDKGGYFDLAPTDL--GENCRR 170 (444)
T ss_dssp BCTTSCBCSSCHHHHHHHHHHHHHTTTCCEEEEEEEECEEEEEECSS---SCEE-EEESCCCCTTCCTTTSC--CTTHHH
T ss_pred ECCCCCCCCCChHHHHHHHHHHHHHcCCCeeeEEeceEEEEEecCCC---CCCC-CcCcCCCCccccCCCcc--hHHHHH
Confidence 99999999999999999999999999999 99999999999997643 3322 24668889998877664 245666
Q ss_pred HHHHHHHHcCCceeeecCCCCCCcEEEEecCChHHHHhHHHHHHHHHHHHHHHHcCcEEeecccccCCCCCCceeeeeec
Q 013989 234 AHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYS 313 (432)
Q Consensus 234 ~i~~al~~~GI~ie~~h~E~gpGQ~Ei~l~p~~~l~aaD~l~~~R~~ik~VA~~~Gl~aTFmPKP~~~~~~GsG~H~H~S 313 (432)
+|+++|+++||+|+++|||+|||||||++.|++++++||+++++|++||+||++||+.|||||||+.++ +|||||+|+|
T Consensus 171 ~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA~~~G~~aTFmpKP~~~~-~GsG~H~H~S 249 (444)
T 3qaj_A 171 DIVLELEEMGFEIEASHHEVAPGQHEIDFKYAGAVRSCDDIQTFKLVVKTIARKHGLHATFMPKPLFGV-NGSGMHCNLS 249 (444)
T ss_dssp HHHHHHHTTTCCEEEEEECSSTTEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHTTEEEECCSCSSTTS-CCCCEEEEEE
T ss_pred HHHHHHHHCCCCeEEeEcCcCCCcEEEecCCChHHHHHHHHHHHHHHHHHHHHHcCCEEEEcCCcCCCC-CCCcceeeec
Confidence 666789999999999999999999999999999999999999999999999999999999999999995 9999999999
Q ss_pred ccccc-----C---CCch-HHHHHHHHHHHHhHHHHhhcccc---cccccCCCCCCCCCCCceeeccCCCcceeeecccC
Q 013989 314 TKSMR-----E---EGGY-ETIKKAILNLSLRHKEHISAYGE---GNERRLTGKHETASIDSFSWGVANRGCSIRVGRET 381 (432)
Q Consensus 314 l~~~~-----~---~~g~-~~~~~~iaGl~L~H~~al~a~~~---nsYkRL~~~~~ap~~~~~sWG~~NR~a~IRvp~~~ 381 (432)
||+.. + +.|+ ...++||+|| |+|+++|+||++ ||||||+|++|||+ +++||.+||+++||||...
T Consensus 250 l~~~g~n~f~~~~~~~~lS~~~~~fiaGl-L~h~~~l~a~~~PtvNSYkRl~pg~~AP~--~~~Wg~~NRsa~iRip~~~ 326 (444)
T 3qaj_A 250 LFKNGVNAFFDENADLQLSETAKHFIAGI-VKHATSFTAVTNPTVNSYKRLVPGYEAPC--YVAWSAQNRSPLIRIPASR 326 (444)
T ss_dssp EEETTEETTCCTTSSSSCCHHHHHHHHHH-HHTHHHHHHHHSCSSTHHHHSCTTSSSSC--BCCEESSCSSSSEECCSCC
T ss_pred cccCCCcccCCCCcccchHHHHHHHHHHH-HHHHHHHHHHHCCCCcccccCCCCCcCCC--cceeecCCCcceEeeccCC
Confidence 98631 1 1244 3558999999 999999999985 89999999999998 9999999999999999643
Q ss_pred CCCCccEEEecCCCCCCCHHHHHHHHHHHhhcCC
Q 013989 382 EKQGKGYLEDRRPASNMDPYVVTSLLAETTILWE 415 (432)
Q Consensus 382 ~~~~~~r~E~R~pda~aNPYLalAailaagl~G~ 415 (432)
+ +++|||+|+||++|||||++||+|+|||+|+
T Consensus 327 ~--~~~RiE~R~pd~~aNPYLa~Aa~LaAGldGI 358 (444)
T 3qaj_A 327 G--ISTRVEVRSVDPAANPYLALSVLLAAGLDGI 358 (444)
T ss_dssp G--GGCCEEECCCCTTSCHHHHHHHHHHHHHHHH
T ss_pred C--CCceEEecCCCCCCCHHHHHHHHHHHHHHHH
Confidence 3 5689999999999999999999999999994
No 6
>4hpp_A Probable glutamine synthetase; glutamine synthase homolog, glutamate, polyamine, ligase; HET: GLU; 2.50A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.3e-83 Score=666.49 Aligned_cols=315 Identities=17% Similarity=0.128 Sum_probs=276.5
Q ss_pred EEEEEEeCccccccceEEEEeccCCCCCCC--CCccccCCC--C-CCCC-------CCCccEEEEEEe--ccccCCCCC-
Q 013989 81 AEYIWIGGTGIDMRSKSKTISKPVEHPSEL--PKWNYDGSS--T-GQAP-------GEDSEVILYPQA--IFKDPFRGG- 145 (432)
Q Consensus 81 ~~yvwidg~g~Dlrgk~r~~~~p~~~~~~~--~~~~fdgss--~-g~~~-------~~~~D~~L~PD~--~~~~P~~~~- 145 (432)
++||++. ++|+.|+.|+|.+|++.+++. .|++||++. + ++.. ++++|++|+||+ ++++||+++
T Consensus 7 v~~v~l~--~~D~~G~~r~k~vp~~~~~~~~~~G~~f~~s~~~~~~~~~~~~~~~~~~~~D~~l~PD~~T~~~~Pw~~~~ 84 (443)
T 4hpp_A 7 VRLVSFV--TTDLAGITRGRSLPLATLEEQLASGCGWVPANSSLTPQDLIDESSPWGSHGDLRLLPDPNSRVRVEQGPDA 84 (443)
T ss_dssp CCEEEEE--EECTTSCEEEEEEEGGGHHHHHTTCEEECGGGGGCCTTSCCCTTCSCSSSCCEEEEECGGGCEEECCCSST
T ss_pred CCEEEEE--EECCCCCEEEEEEEHHHHHHHHhCCcccCchhheeeccCccccccCCCCCCCEEEEEcccceEECCccccc
Confidence 3455454 667889999999999988764 468888762 2 2222 235999999997 999999983
Q ss_pred ---CeEEEEEEEecCCCCcCCCCHHHHHHHHHHhhccCccccEEEeeeeEEEeccCCCCCCCCCCCCCCCCCCCcccccc
Q 013989 146 ---NNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAG 222 (432)
Q Consensus 146 ---~~a~Vlcd~~~~dG~P~~~~pR~~Lk~~l~~l~~~G~~~~~G~E~EF~L~~~~~~~~~g~p~~~~p~~~g~yy~~~~ 222 (432)
++++|+||++++||+|++.|||++|++++++++++|+++++|+|+|||||+. .|.++++||+..+
T Consensus 85 ~~~~~a~v~cd~~~~dG~p~~~~pR~~L~r~~~~~~~~G~~~~~g~E~EF~l~~~------------~p~~~~~~y~~~~ 152 (443)
T 4hpp_A 85 AAPALDYLHGNLVETDGTPWPACPRSLLRAEVERYRDSGLQVIAAFEHEFSLLGL------------PGERPAAAFSLQA 152 (443)
T ss_dssp TSCCEEEEEEEEECTTSCBCTTCHHHHHHHHHHHHHHTTEEEEEEEEEEEEEECC------------CSSSCCCTTCHHH
T ss_pred CCCCeEEEEEEEECCCCCCCCCChHHHHHHHHHHHHHcCCeEEEEeeeEEEEecc------------ccCCCCccCCCCc
Confidence 6999999999999999999999999999999999999999999999999952 3456789998877
Q ss_pred cChhhHHHHHHHHHHHHHHcCCceeeecCCCCCCcEEEEecCChHHHHhHHHHHHHHHHHHHHHHcCcEEeecccccCCC
Q 013989 223 ADKSFGRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGD 302 (432)
Q Consensus 223 ~~~~~~~~i~~~i~~al~~~GI~ie~~h~E~gpGQ~Ei~l~p~~~l~aaD~l~~~R~~ik~VA~~~Gl~aTFmPKP~~~~ 302 (432)
.+. .++++++|+++|+++||+|+++|||++||||||++.|++++++||+++++|++||+||++||++|||||||+.+
T Consensus 153 ~~~--~~~~~~~i~~~l~~~Gi~ve~~h~E~~pgQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA~~~G~~aTFmpKP~~~- 229 (443)
T 4hpp_A 153 QRA--AGQFPGWLVSALAQAGTEPEMFLPEYGQRQYEVTCRPAQGVAAADRAVNVREVTREVARQMGLRTCFAPLPAPG- 229 (443)
T ss_dssp HHH--TTTHHHHHHHHHHHTTCCEEEEEECSSTTEEEEEECCEETHHHHHHHHHHHHHHHHHHHHHTCEEECSSSSSTT-
T ss_pred ccc--hHHHHHHHHHHHHHCCCCeEEeecCCCCCceEEEecCCcHHHHHHHHHHHHHHHHHHHHHhCCEEEEecccCCC-
Confidence 665 57889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeeeeeccccccC------C---CchH-HHHHHHHHHHHhHHHHhhcccc---cccccCCCCCCCCCCCceeeccC
Q 013989 303 WNGAGCHTNYSTKSMRE------E---GGYE-TIKKAILNLSLRHKEHISAYGE---GNERRLTGKHETASIDSFSWGVA 369 (432)
Q Consensus 303 ~~GsG~H~H~Sl~~~~~------~---~g~~-~~~~~iaGl~L~H~~al~a~~~---nsYkRL~~~~~ap~~~~~sWG~~ 369 (432)
++|||||+|+|||+.++ + +|++ ..++||+|| |+|+++|+||++ ||||||+|++|||+ +++||.+
T Consensus 230 ~~GsG~H~h~Sl~~~~G~n~f~~~~~~~~lS~~~~~fiaGl-l~h~~~l~a~~~P~~NSYkRL~pg~~AP~--~~~WG~~ 306 (443)
T 4hpp_A 230 AVTNGVHLHLSLQHADGSPLLYEPGRPNDLSELGEHWAAGV-LAHLPALCALTAPTAASYLRLKPHHWSAA--YACLGLR 306 (443)
T ss_dssp CCCCCEEEEEEEEETTSCBSSBCTTSGGGBCHHHHHHHHHH-HHHHHHHHHHHSCSGGGHHHHSCSTTCCC--BCCEESS
T ss_pred CCcccceeeeeeecCCCCccccCCCCccchhHHHHHHHHHH-HHHHHHHHHHhCCCCcchhccCCCCcCCC--cceeccC
Confidence 49999999999997431 1 2444 347999999 999999999986 89999999999998 9999999
Q ss_pred CCcceeeecccC---CC--CCccEEEecCCCCCCCHHHHHHHHHHHhhcCC
Q 013989 370 NRGCSIRVGRET---EK--QGKGYLEDRRPASNMDPYVVTSLLAETTILWE 415 (432)
Q Consensus 370 NR~a~IRvp~~~---~~--~~~~r~E~R~pda~aNPYLalAailaagl~G~ 415 (432)
||+++||||... +. .+++|||+|+||++|||||++||+|+|||+|+
T Consensus 307 NRsa~iRip~~~~~~~~~~~~~~riE~R~pd~~aNPYLa~AaiLaAGl~GI 357 (443)
T 4hpp_A 307 NREAALRICPVVSVGGKPLGKQYNLEFRPMDATTCPHLAMAAVLIAGRLGI 357 (443)
T ss_dssp CTTSSEEEECCCCSSSCCSSTTCEEEEEEECTTSCHHHHHHHHHHHHHHHH
T ss_pred CCceeEEeccccccCCCccccccEEEEcCCCCCcCHHHHHHHHHHHHHHHH
Confidence 999999999864 22 25689999999999999999999999999995
No 7
>1f52_A Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A {Salmonella typhimurium} SCOP: d.15.9.1 d.128.1.1 PDB: 1f1h_A* 1fpy_A* 1lgr_A* 2lgs_A* 2gls_A
Probab=100.00 E-value=1.2e-82 Score=666.56 Aligned_cols=326 Identities=22% Similarity=0.337 Sum_probs=286.8
Q ss_pred EEEEEEeCccccccceEEEEeccCCCCCC-C--CCccccCCCC-CCCCCCCccEEEEEEe--ccccCCCCCCeEEEEEEE
Q 013989 81 AEYIWIGGTGIDMRSKSKTISKPVEHPSE-L--PKWNYDGSST-GQAPGEDSEVILYPQA--IFKDPFRGGNNILVICDT 154 (432)
Q Consensus 81 ~~yvwidg~g~Dlrgk~r~~~~p~~~~~~-~--~~~~fdgss~-g~~~~~~~D~~L~PD~--~~~~P~~~~~~a~Vlcd~ 154 (432)
++||++. ++|++|+.|++.+|++.+++ + .+++||||++ |+...+++|++|+||+ ++++||+++++++|+||+
T Consensus 14 i~~v~~~--~~D~~G~~r~k~vp~~~~~~~~~~~g~~fdgss~~g~~~~~~sD~~l~PD~~T~~~~Pw~~~~~~~v~~d~ 91 (468)
T 1f52_A 14 VKFVDLR--FTDTKGKEQHVTIPAHQVNAEFFEEGKMFDGSSIGGWKGINESDMVLMPDASTAVIDPFFADSTLIIRCDI 91 (468)
T ss_dssp CCEEEEE--EECTTSCEEEEEEEGGGCCHHHHHHCEEEEGGGSTTSCCSSCCEEEEEECGGGCEECSSCSSCEEEEEEEE
T ss_pred CCEEEEE--EECCCCCEEEEEEEHHHHHHHHhhCceeeccccccccccCCCCCEEEEEecCCcEEccccCCCceEEEEEE
Confidence 3444444 67899999999999999987 3 5799999998 8888789999999997 899999976799999999
Q ss_pred ecC-CCCcCCCCHHHHHHHHHHhhccCcc--ccEEEeeeeEEEeccCC-----C--------CCCCCCC---------CC
Q 013989 155 YTP-AGEPIPTNKRHRAAEIFSNSKVSAE--VPWFGIEQEYTLLQQNV-----K--------WPLGWPV---------GA 209 (432)
Q Consensus 155 ~~~-dG~P~~~~pR~~Lk~~l~~l~~~G~--~~~~G~E~EF~L~~~~~-----~--------~~~g~p~---------~~ 209 (432)
+++ ||+|++.|||++|++++++++++|+ ++++|+|+|||||+.+. + ...+|+. +.
T Consensus 92 ~~~~~G~p~~~~pR~ilk~~~~~l~~~G~~~~~~~G~E~EFfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 171 (468)
T 1f52_A 92 LEPGTLQGYDRDPRSIAKRAEDYLRATGIADTVLFGPEPEFFLFDDIRFGASISGSHVAIDDIEGAWNSSTKYEGGNKGH 171 (468)
T ss_dssp ECTTTCCCCTTCHHHHHHHHHHHHHHHTSCSEEEEEEEEEEEEESEEEEEEETTEEEEEEECTTCGGGGGCCCTTCCCCC
T ss_pred EeCCCCCcCCCCHHHHHHHHHHHHHHcCCCcceEEEeeeEEEEEeccccccCCccccccccccccccCCCccccccCCCC
Confidence 999 7999999999999999999999999 89999999999998631 0 0122432 23
Q ss_pred CCCCCCCcccccccChhhHHHHHHHHHHHHHHcCCceeeecCCCCCC-cEEEEecCChHHHHhHHHHHHHHHHHHHHHHc
Q 013989 210 YPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEVMPG-QWEYQVGPSVGIDAGDHIWCSRYLLERITEQA 288 (432)
Q Consensus 210 ~p~~~g~yy~~~~~~~~~~~~i~~~i~~al~~~GI~ie~~h~E~gpG-Q~Ei~l~p~~~l~aaD~l~~~R~~ik~VA~~~ 288 (432)
.|..+++||+..+.+. .++++++|+++|+++||+|++.|||+||| ||||++.|++++++||+++++|++||+||++|
T Consensus 172 ~~~~~~~Y~~~~~~~~--~~~~~~~i~~~l~~~Gi~ve~~h~E~apggQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA~~h 249 (468)
T 1f52_A 172 RPGVKGGYFPVPPVDS--AQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEIQIYKYVVHNVAHRF 249 (468)
T ss_dssp CCCTTCCSSBCTTSSC--CHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCccCCCcccc--HHHHHHHHHHHHHHCCCCeEEeecCCCCceeEEEeccCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 4677889999988775 58999999999999999999999999996 99999999999999999999999999999999
Q ss_pred CcEEeecccccCCCCCCceeeeeecccccc-----CC--Cch-HHHHHHHHHHHHhHHHHhhcccc---cccccCCCCCC
Q 013989 289 GVVLSLDPKPIEGDWNGAGCHTNYSTKSMR-----EE--GGY-ETIKKAILNLSLRHKEHISAYGE---GNERRLTGKHE 357 (432)
Q Consensus 289 Gl~aTFmPKP~~~~~~GsG~H~H~Sl~~~~-----~~--~g~-~~~~~~iaGl~L~H~~al~a~~~---nsYkRL~~~~~ 357 (432)
|+.|||||||+.++ +|||||+|+|||+.. ++ .++ ...++||+|| |+|+++|+||++ ||||||+|++|
T Consensus 250 Gl~atFmpKP~~g~-~GSG~H~h~Sl~~~g~Nlf~~~~~~~ls~~~~~~iaGl-l~h~~~l~a~~ap~~NSYkRL~pg~e 327 (468)
T 1f52_A 250 GKTATFMPKPMFGD-NGSGMHCHMSLAKNGTNLFSGDKYAGLSEQALYYIGGV-IKHAKAINALANPTTNSYKRLVPGYE 327 (468)
T ss_dssp TCEEECCSCSSTTS-CCCCEEEEEEEEETTEETTBCSSGGGBCHHHHHHHHHH-HHTHHHHHHHHSCSGGGGGTSSSCSS
T ss_pred CCEEEEeCCCCCCC-CCCCcceeeccccCCCcccCCCCcchHHHHHHHHHHHH-HHHHHHhHhHhcCCccchhccCCCCc
Confidence 99999999999996 999999999999731 11 233 3568999999 999999999975 99999999999
Q ss_pred CCCCCceeeccCCCcceeeecccCCCCCccEEEecCCCCCCCHHHHHHHHHHHhhcCC
Q 013989 358 TASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWE 415 (432)
Q Consensus 358 ap~~~~~sWG~~NR~a~IRvp~~~~~~~~~r~E~R~pda~aNPYLalAailaagl~G~ 415 (432)
||+ +++||.+||+++||||... .++++|||+|+||++|||||++|++|+|||+|+
T Consensus 328 AP~--~i~wg~~NRsa~iRiP~~~-~~~~~riE~R~pd~~aNPYLalaailaagL~GI 382 (468)
T 1f52_A 328 APV--MLAYSARNRSASIRIPVVA-SPKARRIEVRFPDPAANPYLCFAALLMAGLDGI 382 (468)
T ss_dssp CCC--EEEEESSCTTEEEECCCCS-CGGGCCEEECCCCTTSCHHHHHHHHHHHHHHHH
T ss_pred CcC--cceeccCCcccceeeCCCC-CCCCCEEEeCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 999 9999999999999999742 225689999999999999999999999999994
No 8
>4acf_A Glutamine synthetase 1; ligase, nucleotide-binding, TRI-substituted IMID TAUT state, RV2220, GLNA1; HET: 46B P3S; 2.00A {Mycobacterium tuberculosis} PDB: 2wgs_A* 2whi_A* 3zxr_A* 3zxv_A* 2bvc_A* 1hto_A* 1htq_A*
Probab=100.00 E-value=6e-82 Score=664.19 Aligned_cols=327 Identities=24% Similarity=0.329 Sum_probs=282.5
Q ss_pred EEEEEEeCccccccceEEEEeccCCCCCC-C--CCccccCCCC-CCCCCCCccEEEEEEe--ccccCCCCCCeEEEEEEE
Q 013989 81 AEYIWIGGTGIDMRSKSKTISKPVEHPSE-L--PKWNYDGSST-GQAPGEDSEVILYPQA--IFKDPFRGGNNILVICDT 154 (432)
Q Consensus 81 ~~yvwidg~g~Dlrgk~r~~~~p~~~~~~-~--~~~~fdgss~-g~~~~~~~D~~L~PD~--~~~~P~~~~~~a~Vlcd~ 154 (432)
++||.+. |+|+.|+.|++.+|++.+++ + .|+.|||||+ |+..+++||++|+||+ ++++||+++.++.|+|++
T Consensus 26 I~~V~l~--f~D~~G~~r~k~ip~~~~~~~~~~~G~~fdgssi~G~~~~~~sD~~l~PD~~T~~~~Pw~~~~~~~v~~~~ 103 (486)
T 4acf_A 26 VEYVDVR--FCDLPGIMQHFTIPASAFDKSVFDDGLAFDGSSIRGFQSIHESDMLLLPDPETARIDPFRAAKTLNINFFV 103 (486)
T ss_dssp CCEEEEE--EECSSSCEEEEEEEGGGCSHHHHHTCEEEEGGGSTTSCCGGGCEEEEEECGGGCEECSSCSSCEEEEEEEE
T ss_pred CcEEEEE--EECCCCcEEEEEEEHHHHHHHHHHCCCeeecccccccccCCCCCEEEEEccceeEECCcCCCccEEEEEEE
Confidence 3344444 56788899999999999965 3 5799999998 8988889999999998 999999998889999999
Q ss_pred ecC-CCCcCCCCHHHHHHHHHHhhccC--ccccEEEeeeeEEEeccCC-----C-------------------CCCCCCC
Q 013989 155 YTP-AGEPIPTNKRHRAAEIFSNSKVS--AEVPWFGIEQEYTLLQQNV-----K-------------------WPLGWPV 207 (432)
Q Consensus 155 ~~~-dG~P~~~~pR~~Lk~~l~~l~~~--G~~~~~G~E~EF~L~~~~~-----~-------------------~~~g~p~ 207 (432)
+++ +|+|++.|||++||++++++++. |+++++|+|+|||||+... + .+.++|.
T Consensus 104 ~d~~~g~P~~~~pR~iLk~~~~~~~~~g~~~~~~~g~E~EF~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~p~ 183 (486)
T 4acf_A 104 HDPFTLEPYSRDPRNIARKAENYLISTGIADTAYFGAEAEFYIFDSVSFDSRANGSFYEVDAISGWWNTGAATEADGSPN 183 (486)
T ss_dssp ECTTTCCBCTTCHHHHHHHHHHHHHHHSSCSEEEEEEEECEEEESEEEEEECSSCEEEEEECTTBGGGTTCSBCTTSCBC
T ss_pred eeCCCCCCCCCCchHHHHHHHHHHHHcCCcceecccceeEEEEeccccccccccCCcccCCccccccCCCCcccCCCCCC
Confidence 985 89999999999999999999875 5589999999999997421 0 0123333
Q ss_pred CCC-CCCCCCcccccccChhhHHHHHHHHHHHHHHcCCceeeecCCCCC-CcEEEEecCChHHHHhHHHHHHHHHHHHHH
Q 013989 208 GAY-PGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEVMP-GQWEYQVGPSVGIDAGDHIWCSRYLLERIT 285 (432)
Q Consensus 208 ~~~-p~~~g~yy~~~~~~~~~~~~i~~~i~~al~~~GI~ie~~h~E~gp-GQ~Ei~l~p~~~l~aaD~l~~~R~~ik~VA 285 (432)
.++ +..++.||...+.+. .++++++|+++|+++||+|+++|||+|| |||||++.|+++|++||+++++|++||+||
T Consensus 184 ~~~~~~~~~~y~~~~~~~~--~~~~~~~i~~~l~~~Gi~ve~~h~E~gp~GQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA 261 (486)
T 4acf_A 184 RGYKVRHKGGYFPVAPNDQ--YVDLRDKMLTNLINSGFILEKGHHEVGSGGQAEINYQFNSLLHAADDMQLYKYIIKNTA 261 (486)
T ss_dssp CCCCBCTTCCSSBCTTTSC--CHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccccCCccccCCcchh--HHHHHHHHHHHHHhCCceEEeeeeeeeccceeEEeccCcchhhhhhHHHHHHHHHHHHH
Confidence 333 334555666666555 4899999999999999999999999998 999999999999999999999999999999
Q ss_pred HHcCcEEeecccccCCCCCCceeeeeecccccc-----CC---Cch-HHHHHHHHHHHHhHHHHhhcccc---cccccCC
Q 013989 286 EQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSMR-----EE---GGY-ETIKKAILNLSLRHKEHISAYGE---GNERRLT 353 (432)
Q Consensus 286 ~~~Gl~aTFmPKP~~~~~~GsG~H~H~Sl~~~~-----~~---~g~-~~~~~~iaGl~L~H~~al~a~~~---nsYkRL~ 353 (432)
++||+.|||||||+.++ +|||||+|+|||+.. ++ .|+ ...++||+|| |+|+++|+||++ ||||||+
T Consensus 262 ~~~G~~aTFmpKP~~~~-~GsG~H~H~Sl~~~g~n~f~~~~~~~~lS~~~~~fiaGl-l~h~~~l~a~~~PtvNSYkRl~ 339 (486)
T 4acf_A 262 WQNGKTVTFMPKPLFGD-NGSGMHCHQSLWKDGAPLMYDETGYAGLSDTARHYIGGL-LHHAPSLLAFTNPTVNSYKRLV 339 (486)
T ss_dssp HHTTCEEECCSCSSTTS-CCCCEEEEEEEEETTEESSBCTTSGGGBCHHHHHHHHHH-HHHHHHHHHHHSCSTTHHHHSS
T ss_pred HHcCCeEEEeeccccCC-CcccceeeeeeccCCCccccccccccccchHHHHHHHHH-HHhhhcceeeecCCCcchhccC
Confidence 99999999999999995 999999999999742 12 244 4568999999 999999999975 9999999
Q ss_pred CCCCCCCCCceeeccCCCcceeeecccCCCCCccEEEecCCCCCCCHHHHHHHHHHHhhcCC
Q 013989 354 GKHETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWE 415 (432)
Q Consensus 354 ~~~~ap~~~~~sWG~~NR~a~IRvp~~~~~~~~~r~E~R~pda~aNPYLalAailaagl~G~ 415 (432)
|++|||+ +++||.+||+|+||||.....++++|||+|+||++|||||++||+|+|||+||
T Consensus 340 pg~~AP~--~~~wg~~NRsa~iRip~~~~~~~~~riE~R~pd~~aNPYLalAailaAGldGI 399 (486)
T 4acf_A 340 PGYEAPI--NLVYSQRNRSACVRIPITGSNPKAKRLEFRSPDSSGNPYLAFSAMLMAGLDGI 399 (486)
T ss_dssp TTSSSCS--BSCEEETCTTSSEEECCCTTCTTTCCEEECCCCSSSCHHHHHHHHHHHHHHHH
T ss_pred CCCcCCc--eeEEeccCCCcceEecccCCCCccceeeecCCCCCCCHHHHHHHHHHHHHHHH
Confidence 9999998 99999999999999998766566789999999999999999999999999994
No 9
>2j9i_A Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus}
Probab=100.00 E-value=1.8e-73 Score=589.64 Aligned_cols=307 Identities=15% Similarity=0.175 Sum_probs=254.1
Q ss_pred CeEEEEEEEEeCccccccceEEEEeccCCCCCCC-CCccccCCC-C-CC-CCCCCccEEEEEEe--ccccCC-CCCCeEE
Q 013989 77 DKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSEL-PKWNYDGSS-T-GQ-APGEDSEVILYPQA--IFKDPF-RGGNNIL 149 (432)
Q Consensus 77 ~~v~~~yvwidg~g~Dlrgk~r~~~~p~~~~~~~-~~~~fdgss-~-g~-~~~~~~D~~L~PD~--~~~~P~-~~~~~a~ 149 (432)
+...+++.|+| +.|+.|+|.+|++.++++ .+++|||++ + ++ ..+.++|++|+||+ ++++|| .+ ++++
T Consensus 13 ~i~~v~~~~~D-----~~G~~r~k~ip~~~~~~~~~g~~~~gs~~~~~~~~~~~~sD~~l~PD~~T~~~~Pw~~~-~~a~ 86 (421)
T 2j9i_A 13 AAAFVRFEATD-----AAGASRSKSIPAQFFEKVIHARGYLEDGEVNAGAAGAAASDIVLMPELSTAAVAAAAAA-ATAA 86 (421)
T ss_dssp TCSEEEEEEEC-----SSSCEEEEEEEGGGCCTTHHHHCEEECGGGSTTTCCTTCCCEEEEECSSCCEECTTSSS-SEEE
T ss_pred CCCEEEEEEEC-----CCCCEEEEEEEHHHHHHhhcCCeeecccCcccccccCCCCCEEEEEecCceEEcCcCCC-CeEE
Confidence 34466677666 556777778888888554 358999985 3 44 45667999999997 899999 66 6999
Q ss_pred EEEEEecCCCCcCCCCHHHHHHHHHHhhccCcc--ccEEEeeeeEEEeccCCCCCCCCCCCCCCCCCCCcccccccChhh
Q 013989 150 VICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAE--VPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSF 227 (432)
Q Consensus 150 Vlcd~~~~dG~P~~~~pR~~Lk~~l~~l~~~G~--~~~~G~E~EF~L~~~~~~~~~g~p~~~~p~~~g~yy~~~~~~~~~ 227 (432)
|+|| ||+|++.|||++|++++++++++|+ ++++|+|+|||||+.+.. +. + ...||...+.+.
T Consensus 87 v~cd----dG~P~~~~pR~iLk~~~~~~~~~G~~d~~~~g~E~EF~l~~~~~~-~~-----~----~p~y~~~~~~~~-- 150 (421)
T 2j9i_A 87 VICD----GGAAAAASPRYIARAALAQLQAAGAAAGLLSAFIADFCIFGVPEV-IN-----S----KTISFPASTTAA-- 150 (421)
T ss_dssp EEEE----EESSCSCCHHHHHHHHHHHHHHTTSCSEECCEECCCCEEESCCEE-EE-----C----SSCEEEECCCTT--
T ss_pred EEcC----CCCCCCCChHHHHHHHHHHHHhcCCccCceEEeeeEEEEEecCCC-CC-----C----CCCcCCCCcccc--
Confidence 9999 7999999999999999999999999 999999999999987531 10 1 112444334333
Q ss_pred HHHHHHHHHHHHHHcCCceeeecCCCCCCcEEEEecCCh-HHHHhHHHHHHHHHHHHHHHHcCcEEeecccccCCCCCCc
Q 013989 228 GRDIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSV-GIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGA 306 (432)
Q Consensus 228 ~~~i~~~i~~al~~~GI~ie~~h~E~gpGQ~Ei~l~p~~-~l~aaD~l~~~R~~ik~VA~~~Gl~aTFmPKP~~~~~~Gs 306 (432)
.++++++|+++|+ +||+|+++|||+|||||||++.|++ ++++||+++++|++||+||++||+.||||||| + ++||
T Consensus 151 ~~~~~~~i~~~l~-~Gi~ve~~h~E~apgQ~Ei~~~~~~~~l~aaD~~~~~k~~vk~vA~~~G~~atFmpKP--~-~~GS 226 (421)
T 2j9i_A 151 AADQPQEAAAGGA-AGAAAGAAGGAAAAGAAEICFLPEAAGAAAADNAFTLRTGLQEVARRYNAIASAAAAA--A-AAAA 226 (421)
T ss_dssp CTTGGGSCCTTCC-CSCCCBTTBCCCCCSSCCTTTTTTTCCSCTTTHHHHHHHHHHHHHHTTTCEEECCTTS--S-TTSC
T ss_pred hhHHHHHHHHHHh-CCCCeEEeecCCCCCcEEEecCCCChHHHHHHHHHHHHHHHHHHHHHhCCEEEEcCCc--C-CCCC
Confidence 3566688888999 9999999999999999999999999 99999999999999999999999999999999 6 6999
Q ss_pred eeeeeecccccc--C------CC--ch-HHHHHHHHHHHHhHHHHhhcccc---cccccCCCCCCCCC-CCceeeccCCC
Q 013989 307 GCHTNYSTKSMR--E------EG--GY-ETIKKAILNLSLRHKEHISAYGE---GNERRLTGKHETAS-IDSFSWGVANR 371 (432)
Q Consensus 307 G~H~H~Sl~~~~--~------~~--g~-~~~~~~iaGl~L~H~~al~a~~~---nsYkRL~~~~~ap~-~~~~sWG~~NR 371 (432)
|+ +|+|||+++ + ++ |+ ...++||+|| |+|+++|+||++ |||||+ .|+|. +.+++||.+||
T Consensus 227 G~-~h~Sl~~~~~~G~nlf~~~~~~~ls~~~~~~iaGi-l~h~~~l~a~~~p~~NSYk~~---~~ap~~~~~~~wG~~NR 301 (421)
T 2j9i_A 227 GA-GSHSIWDVGAAGTNAFAGASGARATLTGAKWLAGL-LAAAAAAAAAAAAAAAAAAAA---AAGAAAAAATAWGAAAA 301 (421)
T ss_dssp CC-BCCEEECEEETTEESSCSSSGGGCCHHHHHHHHHH-HHHHHHHHHHHTCSHHHHHHT---SSSTTCCCEEEEESSCT
T ss_pred ce-EEEeccccCCCCceeecCCCCccccHHHHHHHHHH-HHHHHHHHHHhCCCccccCCC---CCCCcCeeeeeeecCCC
Confidence 99 999999742 1 11 33 3458999999 999999999976 899965 45655 11449999999
Q ss_pred cceeeecccCCCCCccEEEecCCCCCCCHHHHHHHHHHHhhcCC
Q 013989 372 GCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWE 415 (432)
Q Consensus 372 ~a~IRvp~~~~~~~~~r~E~R~pda~aNPYLalAailaagl~G~ 415 (432)
+++||||.. ..++++|||+|+||++|||||++|++|+|||+|+
T Consensus 302 sa~iRip~~-~~~~~~riE~R~pd~~aNPYLa~aailaagl~GI 344 (421)
T 2j9i_A 302 ACALNIAAA-AAAKGAQIENKAGAAAANPYLVLAATVAAGLDGI 344 (421)
T ss_dssp TEEEEEECC-SSGGGCEEEECSCBTTSCHHHHHHHHHHHHHHHH
T ss_pred ccceeeccc-CCCCCCEEEEcCCCCCCChHHHHHHHHHHHhhhh
Confidence 999999976 2235689999999999999999999999999994
No 10
>3o6x_A Glutamine synthetase; type III, beta barrel,dodecamer, ligas; HET: P3S ADP; 3.50A {Bacteroides fragilis}
Probab=100.00 E-value=5.4e-57 Score=483.38 Aligned_cols=283 Identities=19% Similarity=0.209 Sum_probs=210.8
Q ss_pred ccCCCC---CCCCCCCccEEEEEEe---ccccCCCCCCeEEEEEEEecCCCC------cCCCCHHHHHHHHHHhhccCcc
Q 013989 115 YDGSST---GQAPGEDSEVILYPQA---IFKDPFRGGNNILVICDTYTPAGE------PIPTNKRHRAAEIFSNSKVSAE 182 (432)
Q Consensus 115 fdgss~---g~~~~~~~D~~L~PD~---~~~~P~~~~~~a~Vlcd~~~~dG~------P~~~~pR~~Lk~~l~~l~~~G~ 182 (432)
-||||+ |+...+++++++.||+ .+++| ++..+.|.+++.+|+ |+..|||++++++++.++..|.
T Consensus 128 ~DgSS~p~gG~r~t~earg~~~~D~ts~afi~~----~TL~IP~~f~s~~Ge~ld~ktPL~rsPR~ilk~A~~~Lk~~G~ 203 (729)
T 3o6x_A 128 PDASSFPNGGIRNTFEARGYTAWDGSSPAFVVD----TTLCIPTIFISYTGEALDYKTPLLKALAAVDKAATEVCQLFDK 203 (729)
T ss_dssp --------------------CCBCSSSCCEEET----TEEECCBCCC----CCCBSHHHHHHHHHHHHHHHHHHHHTSSS
T ss_pred CccccCCCccchhhhhccCceecCCCCCeEEeC----CeEEEEEEEEeCCCCcCCCCCchhhCHHHHHHHHHHHHHHcCC
Confidence 499998 7888889999999996 66776 489999999987885 5788999999999999999997
Q ss_pred -----ccEEEeeeeEEEeccCC--CCCC----CCCCCCCCCCCC-----CcccccccChhhHHHHHHHHHHHHHHcCCce
Q 013989 183 -----VPWFGIEQEYTLLQQNV--KWPL----GWPVGAYPGPQG-----PYYCGAGADKSFGRDIADAHYKACLYAGINI 246 (432)
Q Consensus 183 -----~~~~G~E~EF~L~~~~~--~~~~----g~p~~~~p~~~g-----~yy~~~~~~~~~~~~i~~~i~~al~~~GI~i 246 (432)
++++|+|+|||||++.. ..+. |+...+.+.++| +||...+ +. ..++++++.++|+++||+|
T Consensus 204 d~~~v~~~~G~E~EFFLfd~~~~~~r~dl~~tGrtl~G~~P~kgq~l~d~Yf~~~p-d~--~~~~~~di~~~L~~~GI~v 280 (729)
T 3o6x_A 204 NITRVFTNLGWEQEYFLVDTSLYNARPDLRLTGRTLMGHSSAKDQQLEDHYFGSIP-PR--VTAFMKELEIECHKLGIPV 280 (729)
T ss_dssp CCCCEEEEEEEEECEEEEEHHHHHSCTTHHHHSSCSCCCC--------------CC-HH--HHHHHHHHHHHHHHHTCCE
T ss_pred CCccceEEEEeccEEEEEecchhccCcccccccccccCCCCCCCCCCCCccCCCCc-hh--HHHHHHHHHHHHHHCCCCe
Confidence 69999999999998742 1111 111112222344 6776655 43 4677777778899999999
Q ss_pred eeecCCCCCCcEEEEecCChHHHHhHHHHHHHHHHHHHHHHcCcEEeecccccCCCCCCceeeeeeccccccC------C
Q 013989 247 SGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKSMRE------E 320 (432)
Q Consensus 247 e~~h~E~gpGQ~Ei~l~p~~~l~aaD~l~~~R~~ik~VA~~~Gl~aTFmPKP~~~~~~GsG~H~H~Sl~~~~~------~ 320 (432)
++.|+|+|||||||++.|++++++||+++++|++||+||++||+.|||||||+.| ++|||+|+|+|||+..+ +
T Consensus 281 e~~H~EvaPGQ~EI~~~~~~al~AAD~~~l~K~vvK~VA~~hGl~ATFMPKP~~g-~nGSG~HvH~SL~~~~G~NLF~~~ 359 (729)
T 3o6x_A 281 KTRHNEVAPNQFELAPIFENCNLANDHNQLVMDLMKRIARKHHFAVLFHEKPYNG-VNGSGKHNNWSLCTDTGINLFAPG 359 (729)
T ss_dssp EEECBCSSTTEECCEECCEEHHHHHHHHHHHHHHHHHHHHHTTEEEECSSCSSTT-SCCCBEEEEEEEEETTCCCSSCCC
T ss_pred EEeecCCCCCceEeccCCChHHHHHHHHHHHHHHHHHHHHHhCCEEEEecccCCC-CCCCcceeeccccCCCCCcCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999 59999999999997421 1
Q ss_pred C---c---h-HHHHHHHHHHHHhHHHHhhcccc---cccccCCCCCCCCCC--------------Ccee-----------
Q 013989 321 G---G---Y-ETIKKAILNLSLRHKEHISAYGE---GNERRLTGKHETASI--------------DSFS----------- 365 (432)
Q Consensus 321 ~---g---~-~~~~~~iaGl~L~H~~al~a~~~---nsYkRL~~~~~ap~~--------------~~~s----------- 365 (432)
+ + + ...++||+|+ |+|+++|+||++ ||| || |++|||+. +.+.
T Consensus 360 d~~~~~~~~s~~~~~fIaGV-LkHa~aL~A~~aPt~NSY-RL-~g~EAP~~iisi~lG~~l~~vl~~i~~~~~g~~~~~~ 436 (729)
T 3o6x_A 360 KNPKGNMLFLTFLVNVLMMV-HKNQDLLRASIMSAGNSH-RL-GANEAPPAILSIFLGSQLSATLDEIVRQVTNSKMTPE 436 (729)
T ss_dssp SSTTTCHHHHHHHHHHHHHH-HHTHHHHHHHSCCHHHHT-TS-SSSSCCCSCCCEECCHHHHHHHHCC------------
T ss_pred CCccchhhHHHHHHHHHHHH-HHhHHHHHHHhCCCcccc-cc-CCCcCCchhhhhhhhHHHHHHHHHHHhhccCCCCCcc
Confidence 1 1 1 2346899999 999999999986 899 99 99999983 0022
Q ss_pred ------ecc------------CCCcceeeecccCCCCCccEEEecCCCCCCC---HHHHHHHHHHHhhcCC
Q 013989 366 ------WGV------------ANRGCSIRVGRETEKQGKGYLEDRRPASNMD---PYVVTSLLAETTILWE 415 (432)
Q Consensus 366 ------WG~------------~NR~a~IRvp~~~~~~~~~r~E~R~pda~aN---PYLalAailaagl~G~ 415 (432)
||+ +||++++|+.+ .|||+|.|++++| ||+++++++|+||+|+
T Consensus 437 ~~~~~~~Gv~~lP~~~~d~~drNRTspfaftG-------nrfEfR~~Gss~n~a~P~l~lnaivA~~L~gi 500 (729)
T 3o6x_A 437 EKTTLKLGIGRIPEILLDTTDRNRTSPFAFTG-------NRFEFRAAGSSANCAAAMIAINAAMANQLNEF 500 (729)
T ss_dssp ---------------------CCCSSSSCBCS-------SSEEETTSBSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCcccCCCCccCcCccccCCCccccC-------CeeEEecCCcccchhhHHHHHHHHHHHHHHHH
Confidence 454 99999999872 5999999999999 9999999999999994
No 11
>1r8g_A Hypothetical protein YBDK; structural genomics, unknown function, carboxylate-amine ligase, structure 2 function project, S2F; 2.15A {Escherichia coli} SCOP: d.128.1.3 PDB: 1tt4_A
Probab=98.22 E-value=2.2e-05 Score=79.33 Aligned_cols=131 Identities=14% Similarity=0.041 Sum_probs=86.5
Q ss_pred cccEEEeeeeEEEeccCCCCCCCCCCCCCCCCCCCcccccccChhhHHHHHHHHHHHHHHcCCce--eeecCCCCCCcEE
Q 013989 182 EVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINI--SGTNGEVMPGQWE 259 (432)
Q Consensus 182 ~~~~~G~E~EF~L~~~~~~~~~g~p~~~~p~~~g~yy~~~~~~~~~~~~i~~~i~~al~~~GI~i--e~~h~E~gpGQ~E 259 (432)
-...+|+|.||.+++.++. .+.+ + . .++++. .+=.+ ..+..|..-+|.|
T Consensus 10 ~~~~~GiE~E~~~Vd~~~g---------~~~~---~------~----~~~l~~-------~~~~~~~~~it~E~~~~qlE 60 (372)
T 1r8g_A 10 EPFTLGIELEMQVVNPPGY---------DLSQ---D------S----SMLIDA-------VKNKITAGEVKHDITESMLE 60 (372)
T ss_dssp CTTCEEEEEEEEEEETTTT---------EECS---C------C----HHHHTT-------TSSSCSSSEEEECSSSSEEE
T ss_pred CCCceEEEEEEeeECCCCC---------CcCc---c------H----HHHHHh-------chhcccCCcccchhhccEEE
Confidence 3568999999999997631 1111 1 0 223221 22111 4578899999999
Q ss_pred EEecCCh-HHHHhHHHHHHHHHHHHHHHHcCcEE---eecccc-----------c----CCC-------CCCceeeeeec
Q 013989 260 YQVGPSV-GIDAGDHIWCSRYLLERITEQAGVVL---SLDPKP-----------I----EGD-------WNGAGCHTNYS 313 (432)
Q Consensus 260 i~l~p~~-~l~aaD~l~~~R~~ik~VA~~~Gl~a---TFmPKP-----------~----~~~-------~~GsG~H~H~S 313 (432)
++..|+. .-++.+.+-..+..++++|.++|... ++.|+. . ... ..-+|+|+|++
T Consensus 61 l~t~p~~~~~e~~~~L~~~~~~~~~~a~~~g~~l~~~g~~P~~~~~~~~i~~~~rY~~l~~~~g~~~~~~~i~g~hvhv~ 140 (372)
T 1r8g_A 61 LATDVCRDINQAAGQFSAMQKVVLQAATDHHLEICGGGTHPFQKWQRQEVCDNERYQRTLENFGYLIQQATVFGQHVHVG 140 (372)
T ss_dssp EECCSBSSHHHHHHHHHHHHHHHHHHHHHTTCEEECCSBCSSCCC----------------CCGGGGCSCCBCEEEEEEE
T ss_pred ecCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEecCCCCCCCCccCCCCCchHHHHHHHHHHHHHHhhceeeEEEEeC
Confidence 9999984 66699999999999999999988764 455542 1 000 12389999999
Q ss_pred cccccCCCchHHHHHHHHHHHHhHHHHhhcccccc
Q 013989 314 TKSMREEGGYETIKKAILNLSLRHKEHISAYGEGN 348 (432)
Q Consensus 314 l~~~~~~~g~~~~~~~iaGl~L~H~~al~a~~~ns 348 (432)
+.+. . ..-..+..+ +.+.|.+.|++.||
T Consensus 141 ~~~~-----~-~~~~~~~~~-~~~~p~l~aL~anS 168 (372)
T 1r8g_A 141 CASG-----D-DAIYLLHGL-SRFVPHFIALSAAS 168 (372)
T ss_dssp CSSH-----H-HHHHHHHHH-HTTHHHHHHHHCCB
T ss_pred CCCH-----H-HHHHHHHHH-HHHHHHHHHHHhCC
Confidence 9652 1 111233445 77889999887654
No 12
>2gwd_A Glutamate cysteine ligase; disulfide bridges, glutathione biosynthesis, beta-hairpin, R regulation; HET: GLU; 2.09A {Brassica juncea} PDB: 2gwc_A*
Probab=97.99 E-value=0.00017 Score=74.88 Aligned_cols=152 Identities=16% Similarity=0.096 Sum_probs=97.1
Q ss_pred CHHHHHHHHHHhhccCccccEEEeeeeEEEeccCCCCCCCCCCCCCCCCCCCcccccccChhhHHHHHHHHHHHHHHcCC
Q 013989 165 NKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGI 244 (432)
Q Consensus 165 ~pR~~Lk~~l~~l~~~G~~~~~G~E~EF~L~~~~~~~~~g~p~~~~p~~~g~yy~~~~~~~~~~~~i~~~i~~al~~~GI 244 (432)
-.+..|.+.++.--..+-...+|+|.||++++.++. .+. +|. ...++++.+.. ..|.
T Consensus 16 ~~~~~l~~~~~~~~~~~~~~~iGvE~E~~lVd~~~~---------~~~---~~~--------~~~~lL~~l~~---~~g~ 72 (449)
T 2gwd_A 16 LTREDLIAYLASGCKSKEKWRIGTEHEKFGFEVNTL---------RPM---KYD--------QIAELLNSIAE---RFEW 72 (449)
T ss_dssp CCHHHHHHHHHTTCCCGGGCCEEEEEEEEEEETTTC---------CBC---CHH--------HHHHHHHHHHH---HHTC
T ss_pred cCHHHHHHHHHhcCCCCCCCeEEEEeEEEeeecCCC---------CCC---ChH--------HHHHHHHHHHH---hhcc
Confidence 345556666654322355789999999999997632 111 111 12455554422 2342
Q ss_pred -------ce-------eeecCCCCCCcEEEEecCCh-HHHHhHHHHHHHHHHHHHHHHcCcEE---eeccc---------
Q 013989 245 -------NI-------SGTNGEVMPGQWEYQVGPSV-GIDAGDHIWCSRYLLERITEQAGVVL---SLDPK--------- 297 (432)
Q Consensus 245 -------~i-------e~~h~E~gpGQ~Ei~l~p~~-~l~aaD~l~~~R~~ik~VA~~~Gl~a---TFmPK--------- 297 (432)
++ ..+..|.+ +|+|++..|+. .-++.+.+...+..++++|+++|+.. .++|+
T Consensus 73 ~~~~~~~~~~~l~~~~~~i~~E~~-~qiEl~t~p~~~~~e~~~~l~~~~~~~~~~a~~~g~~l~~~G~~P~~~~~~~~~~ 151 (449)
T 2gwd_A 73 EKVMEGDKIIGLKQGKQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGMGFQPKWRREDIPTM 151 (449)
T ss_dssp EEEEETTEEEEEEETTEEEEECTT-CCEEEECCCBSSHHHHHHHHHHHHHHHHHHHHHHTEEEECCSBCSSCCGGGSCCC
T ss_pred CccccccccccccCCCceEEecCC-ceEEecCCCcCCHHHHHHHHHHHHHHHHHHHHHcCCceeeccCCCCCCccccCCC
Confidence 11 11666776 99999999985 55789999999999999999999764 34443
Q ss_pred --cc----------CCCCC-------CceeeeeeccccccCCCchHHHHHHHHHHHHhHHHHhhcccccc
Q 013989 298 --PI----------EGDWN-------GAGCHTNYSTKSMREEGGYETIKKAILNLSLRHKEHISAYGEGN 348 (432)
Q Consensus 298 --P~----------~~~~~-------GsG~H~H~Sl~~~~~~~g~~~~~~~iaGl~L~H~~al~a~~~ns 348 (432)
|. .+ +. -+|+|+|+++.+. ..+-..+..+ +...|.+.|+++||
T Consensus 152 ~~~RY~~m~~~~~~~g-~~g~~mm~~~~g~qVhl~~~~~------~~~~~~~~~~-~~~~P~llALsAnS 213 (449)
T 2gwd_A 152 PKGRYDIMRNYMPKVG-SLGLDMMLRTCTVQVNLDFSSE------ADMIRKFRAG-LALQPIATALFANS 213 (449)
T ss_dssp SCHHHHHHHHHGGGTC-SSHHHHHHHBCEEEEEECCSSH------HHHHHHHHHH-HHHHHHHHHHHCCB
T ss_pred CchHHHHHHHHHHHhc-hhHHHHhhcceeeEEEecCCCH------HHHHHHHHHH-HHHHHHHHHHHhCC
Confidence 21 02 22 4789999999652 1122333445 77789999887654
No 13
>3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V}
Probab=96.26 E-value=0.15 Score=55.99 Aligned_cols=98 Identities=14% Similarity=-0.006 Sum_probs=63.7
Q ss_pred eecCCCCCCcEEEEecCCh-HHHHhHHHHHHHHHHHHHH-HHcCcEEeecc-c------ccCCCCC--------------
Q 013989 248 GTNGEVMPGQWEYQVGPSV-GIDAGDHIWCSRYLLERIT-EQAGVVLSLDP-K------PIEGDWN-------------- 304 (432)
Q Consensus 248 ~~h~E~gpGQ~Ei~l~p~~-~l~aaD~l~~~R~~ik~VA-~~~Gl~aTFmP-K------P~~~~~~-------------- 304 (432)
.+.+|..-.|.|+...++. .-++-+.|-..|..+.+.+ ....+-+.=|| . |+.. |.
T Consensus 54 ~i~~d~~es~lE~~Tpv~~~~~~~~~~L~~l~~~~~~~~~~~e~lw~~smp~~l~~~~i~ia~-~~~~~~~~Yr~~l~~r 132 (750)
T 3ln6_A 54 YIQTDYSEPQLELITPIAKDSQEAIRFLKAISDVAGRSINHDEYLWPLSMPPKVREEDIQIAQ-LEDAFEYDYRKYLEKT 132 (750)
T ss_dssp SEEESSBSSEEEEECCCBSSHHHHHHHHHHHHHHHHHHSCTTEEECCSSSCSSCCTTTCCBCC-CSCHHHHHHHHHHHHH
T ss_pred CccchhhhhheeeeCcCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeecCCCCCCCCCCCccc-CCCCCcHHHHHHHHHH
Confidence 5677999999999999985 6678888988888888876 43333222222 1 3332 21
Q ss_pred -------Cceeeeeecccccc--------CCCchHHHH-----HHHHHHHHhHHHHhhccccc
Q 013989 305 -------GAGCHTNYSTKSMR--------EEGGYETIK-----KAILNLSLRHKEHISAYGEG 347 (432)
Q Consensus 305 -------GsG~H~H~Sl~~~~--------~~~g~~~~~-----~~iaGl~L~H~~al~a~~~n 347 (432)
=+|+|+|+|+-+.. +......++ .-+.++ +++.++|.+++.+
T Consensus 133 yg~~~q~i~G~Hvn~~~~~~~~~~l~~~~~~~~~~~~~~~~y~~l~r~~-~r~~w~l~~L~ga 194 (750)
T 3ln6_A 133 YGKLIQSISGIHYNLGLGQELLTSLFELSQADNAIDFQNQLYMKLSQNF-LRYRWLLTYLYGA 194 (750)
T ss_dssp HCTGGGGCCCEEEEEEECHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHH-HHHHHHHHHHTCC
T ss_pred hChhhceeeeEEEEecCChHHHHHHhhccccchHHHHhhhHHHHHHHHH-HhHHHHHHHHhhC
Confidence 24899999997631 001122232 235566 8899999999753
No 14
>3ln7_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamylcysteine ligase domain, ATP-grAsp domain, HYBR enzyme, ATP-binding; 3.20A {Pasteurella multocida}
Probab=88.17 E-value=2 Score=47.21 Aligned_cols=97 Identities=14% Similarity=0.074 Sum_probs=62.6
Q ss_pred eecCCCCCCcEEEEecCCh-HHHHhHHHHHHHHHHHHHH-HHcCcEEeec----cc----ccCCCCCC------------
Q 013989 248 GTNGEVMPGQWEYQVGPSV-GIDAGDHIWCSRYLLERIT-EQAGVVLSLD----PK----PIEGDWNG------------ 305 (432)
Q Consensus 248 ~~h~E~gpGQ~Ei~l~p~~-~l~aaD~l~~~R~~ik~VA-~~~Gl~aTFm----PK----P~~~~~~G------------ 305 (432)
.+.+|..-.|.|+...++. .-++-+.|-..|.++.+.+ ....+-+.=| |. |+.. |..
T Consensus 53 ~i~td~ses~lE~iTpv~~~~~~~~~~L~~l~~~~~~~~~~~e~lwp~smp~~l~~~~~ip~a~-~~~~~~~~Yr~~L~~ 131 (757)
T 3ln7_A 53 YIQTDFAESQLELITPPTKKLEDTFRWLSVIHEVVQRSLPEEEYIFPLSMPAGLPAEEQIRVAQ-LDNPEDVAYREYLVK 131 (757)
T ss_dssp SEECSSSTTEEEEEEEEESSHHHHHHHHHHHHHHHHHHSCTTEECCCSSSCSBCCC---CCCCC-CSSHHHHHHHHHHHH
T ss_pred CCCchhhhhheeeeCcCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCcCCCCCCCCccc-cCCCccHHHHHHHHH
Confidence 5678999999999999984 6678888888888888875 3333322222 21 4442 222
Q ss_pred ---------ceeeeeecccccc--------CC-CchHHHHH-----HHHHHHHhHHHHhhcccc
Q 013989 306 ---------AGCHTNYSTKSMR--------EE-GGYETIKK-----AILNLSLRHKEHISAYGE 346 (432)
Q Consensus 306 ---------sG~H~H~Sl~~~~--------~~-~g~~~~~~-----~iaGl~L~H~~al~a~~~ 346 (432)
+|+|+|+|+-+.. ++ .....+.+ -+.++ +++.+.|.+++.
T Consensus 132 ryG~~~q~i~GiH~n~s~~~~~~~~l~~~~~~~~~~~~~~~~~Y~~l~r~~-~r~~wll~yL~g 194 (757)
T 3ln7_A 132 IYGKNKQMVSGIHYNFQLSPDLITRLFRLQNEYQSAVDFQNDLYLKMAKNF-LRYQWILLYLLA 194 (757)
T ss_dssp HHCSHHHHCCCCEEEEEECHHHHHHHHHHCTTTCSHHHHHHHHHHHHHHHH-HHHHHHHHHHTC
T ss_pred HhchhhceeeeEEEEEecChHHHHHHhhhcccchhHHHHHhHHHHHHHHhh-HhHHHHHHHHhh
Confidence 3899999997631 11 11222322 24556 889999998864
No 15
>1va6_A Glutamate--cysteine ligase; glutathione homeostasis, beta barrel, peptide synthesis, transition state analogue; HET: P2S ADP P6G; 2.10A {Escherichia coli} SCOP: d.128.1.4 PDB: 1v4g_A* 2d32_A* 2d33_A*
Probab=80.92 E-value=3.7 Score=43.11 Aligned_cols=38 Identities=5% Similarity=-0.190 Sum_probs=30.0
Q ss_pred eecCCCCCCcEEEEecCC-hHHHHhHHHHHHHHHHHHHH
Q 013989 248 GTNGEVMPGQWEYQVGPS-VGIDAGDHIWCSRYLLERIT 285 (432)
Q Consensus 248 ~~h~E~gpGQ~Ei~l~p~-~~l~aaD~l~~~R~~ik~VA 285 (432)
.+.+|..-.|.|+...++ +.-++-+.+-..+..+.+.+
T Consensus 56 ~IttDfsEsqlE~iTpv~~s~~eal~~L~~l~~~v~~~l 94 (518)
T 1va6_A 56 WITTDFAEALLEFITPVDGDIEHMLTFMRDLHRYTARNM 94 (518)
T ss_dssp SEEECSBTTEEEEECCCBSCHHHHHHHHHHHHHHHHTSS
T ss_pred CcCCCcchhheeecCCCCCCHHHHHHHHHHHHHHHHHHc
Confidence 367788889999999998 45567888877777777777
No 16
>2fao_A Probable ATP-dependent DNA ligase; polymerase, primase, NHEJ, hydrolase/transferase complex; 1.50A {Pseudomonas aeruginosa} PDB: 2faq_A* 2far_A*
Probab=79.29 E-value=15 Score=36.05 Aligned_cols=126 Identities=13% Similarity=0.209 Sum_probs=81.3
Q ss_pred HHHcC-CceeeecCCCC----CCcEEEEecCChHHHHhHHHHHHHHHHHHHHHHcCcEEeecccccCCCCCCceeeeeec
Q 013989 239 CLYAG-INISGTNGEVM----PGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNGAGCHTNYS 313 (432)
Q Consensus 239 l~~~G-I~ie~~h~E~g----pGQ~Ei~l~p~~~l~aaD~l~~~R~~ik~VA~~~Gl~aTFmPKP~~~~~~GsG~H~H~S 313 (432)
+.++| |++..+..-.+ |.+.=|.+.|.+++.-.|-.-.++. +|++-.+.|+. +| ||- . -|.|+|+-+-
T Consensus 111 ~aq~~~lE~H~w~~~~~~~~~PD~lvfDLDP~~~~~f~~v~~aA~~-~r~~L~~lGL~-~f-~KT--S--GgkGlHV~vP 183 (309)
T 2fao_A 111 AVQMGSIEFHTWNASLANLERPDRFVLDLDPDPALPWKRMLEATQL-SLTLLDELGLR-AF-LKT--S--GGKGMHLLVP 183 (309)
T ss_dssp HHHTTEEEEEECSSCTTCTTSCSEEEEEEEECTTSCHHHHHHHHHH-HHHHHHHHTCC-CE-EEE--C--SSSSEEEEEE
T ss_pred HHHhCcEEeeCCcccCCCCCCCCEEEEECCCCcCCCHHHHHHHHHH-HHHHHHHcCCc-ee-eEc--c--CCCeeEEEEE
Confidence 45566 66665555443 8999999999988877776666655 89999999985 46 772 1 3689999999
Q ss_pred cccccCCCchHHHHHHHHHHHHhHHHHhh--cccccccccCCCCCCCCCCCceeeccCCCcceeeeccc
Q 013989 314 TKSMREEGGYETIKKAILNLSLRHKEHIS--AYGEGNERRLTGKHETASIDSFSWGVANRGCSIRVGRE 380 (432)
Q Consensus 314 l~~~~~~~g~~~~~~~iaGl~L~H~~al~--a~~~nsYkRL~~~~~ap~~~~~sWG~~NR~a~IRvp~~ 380 (432)
|... -+....+.|-..+ -+++.... .|+...-|...++. . ++-|-.++|+..+--|.+
T Consensus 184 l~~~---~~~~~vr~fa~~~-A~~l~~~~Pd~~t~~~~k~~R~gk---I--fiDy~qN~~g~T~vapYS 243 (309)
T 2fao_A 184 LERR---HGWDEVKDFAQAI-SQHLARLMPERFSAVSGPRNRVGK---I--FVDYLRNSRGASTVAAYS 243 (309)
T ss_dssp CCSC---SCHHHHHHHHHHH-HHHHHHHCTTTEECSCSGGGSTTS---E--EEECGGGSTTCCEECTTC
T ss_pred cCCC---CCHHHHHHHHHHH-HHHHHHhCcceeehhhhHhhCCCC---E--EEeCccCCCCCeEEccCC
Confidence 9652 3455555555555 34444332 23433333333332 2 788888888776666654
No 17
>1nxi_A Conserved hypothetical protein VC0424; structural genomics, AB sandwich, COG 3076, ATCC NO. 51394D, NESG target OP3, PSI; NMR {Vibrio cholerae} SCOP: d.58.47.1
Probab=71.75 E-value=9 Score=32.75 Aligned_cols=90 Identities=13% Similarity=0.064 Sum_probs=59.4
Q ss_pred HHHHHhhccCccccEEEeeeeEEEeccCCCCCCCCCCCCCCCCCCCcccccccChhhHHHHHHHHHHHHHHcCCceeeec
Q 013989 171 AEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTN 250 (432)
Q Consensus 171 k~~l~~l~~~G~~~~~G~E~EF~L~~~~~~~~~g~p~~~~p~~~g~yy~~~~~~~~~~~~i~~~i~~al~~~GI~ie~~h 250 (432)
.++++.|++.|..+..-.++||++.=++. +-++.....+...|..|+..-
T Consensus 22 ~~Vl~~L~e~Gddl~~~r~IEH~~~F~de------------------------------~~~e~~a~~~~~~Gy~v~~~~ 71 (132)
T 1nxi_A 22 RDIIQALLEDGSDPDALYEIEHHLFAEDF------------------------------DKLEKAAVEAFKMGFEVLEAE 71 (132)
T ss_dssp HHHHHHHHHHTCCTTSCEEEEEEEEESCH------------------------------HHHHHHHHHHHHHTCCCBCCC
T ss_pred HHHHHHHHhCCCCcCCCeEEEEEEEeCCH------------------------------HHHHHHHHHHHHCCCEEEecc
Confidence 56777777789999999999998875431 112223334567898886322
Q ss_pred ---CCCCCCcEEEEecCChHHHHhHHHHHHHHHHHHHHHHcCcE
Q 013989 251 ---GEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVV 291 (432)
Q Consensus 251 ---~E~gpGQ~Ei~l~p~~~l~aaD~l~~~R~~ik~VA~~~Gl~ 291 (432)
.|-+-..|++.+.-...+...+=.-...+++. +|+++|..
T Consensus 72 ~~e~e~g~~~~~~~i~~~~~l~~~~I~~~~~~L~~-lA~~~~G~ 114 (132)
T 1nxi_A 72 ETEDEDGNKLLCFDATMQSALDAKLIDEQVEKLVN-LAEKFDII 114 (132)
T ss_dssp CBCCSSCSSBEEEEEEEEECSCHHHHHHHHHHHHH-HHHHHTCE
T ss_pred cccCCCCceeEEEEEEEeccCCHHHHHHHHHHHHH-HHHHhCcE
Confidence 23333479999988877776655555555555 88888764
No 18
>2iru_A Putative DNA ligase-like protein RV0938/MT0965; polymerase, primase, NHEJ, transferase; 1.65A {Mycobacterium tuberculosis} PDB: 2irx_A* 2iry_A* 2r9l_A* 3pky_A*
Probab=66.71 E-value=13 Score=36.36 Aligned_cols=126 Identities=9% Similarity=0.099 Sum_probs=78.0
Q ss_pred HHHcC-CceeeecCCC-C-----------CCcEEEEecCChHHHHhHHHHHHHHHHHHHHHHcCcEEeecccccCCCCCC
Q 013989 239 CLYAG-INISGTNGEV-M-----------PGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEGDWNG 305 (432)
Q Consensus 239 l~~~G-I~ie~~h~E~-g-----------pGQ~Ei~l~p~~~l~aaD~l~~~R~~ik~VA~~~Gl~aTFmPKP~~~~~~G 305 (432)
+.++| |++..+..-. . |.+.=|.+.|.+++.-.|-.-.++ .+|++-.+.|+. +| ||- . -|
T Consensus 105 ~aq~g~lE~H~w~~r~~~~~~~~~~~~~~PD~lvfDLDP~~~~~f~~v~~aA~-~~r~~L~~lGL~-~f-~KT--S--Gg 177 (303)
T 2iru_A 105 IAQQAALEVHVPQWRFVAEPGSGELNPGPATRLVFDLDPGEGVMMAQLAEVAR-AVRDLLADIGLV-TF-PVT--S--GS 177 (303)
T ss_dssp HHHTTCCEEEECSEEEEECTTTCCEEEEEEEEEEEEEEECTTCCHHHHHHHHH-HHHHHHHTTTCC-CE-EEE--C--SS
T ss_pred HHHhCcEeeeCCccccccccccccCCCCCCCEEEEECCCCCCCCHHHHHHHHH-HHHHHHHHcCCc-cc-eEc--c--CC
Confidence 44566 6666554333 2 678889999998877666655554 488999999987 46 772 2 37
Q ss_pred ceeeeeeccccccCCCchHHHHHHHHHHHHhHHHHhh--cccccccccCCCCCCCCCCCceeeccCCCcceeeeccc
Q 013989 306 AGCHTNYSTKSMREEGGYETIKKAILNLSLRHKEHIS--AYGEGNERRLTGKHETASIDSFSWGVANRGCSIRVGRE 380 (432)
Q Consensus 306 sG~H~H~Sl~~~~~~~g~~~~~~~iaGl~L~H~~al~--a~~~nsYkRL~~~~~ap~~~~~sWG~~NR~a~IRvp~~ 380 (432)
.|+|+-+-|... -+....+.|-..+ -+++..-. .|+...-|...++- . ++-|-.++|+..+=-|.+
T Consensus 178 kGlHV~vPl~~~---~~~~~vr~fa~~~-A~~l~~~~Pd~~t~~~~k~~R~gk---I--fvDy~qN~~g~T~vapYS 245 (303)
T 2iru_A 178 KGLHLYTPLDEP---VSSRGATVLAKRV-AQRLEQAMPALVTSTMTKSLRAGK---V--FVDWSQNSGSKTTIAPYS 245 (303)
T ss_dssp SCEEEEEEEEEE---ECHHHHHHHHHHH-HHHHHHHCTTTEESSCCGGGCTTS---E--EEECGGGSTTCCEECTTC
T ss_pred CeEEEEEEcCCC---CCHHHHHHHHHHH-HHHHHHHCcceehhhhhHHhCCCC---E--EEECccCCCCCeeEecCc
Confidence 899999999642 2344555555555 33443332 23433334443332 2 788888888876655544
No 19
>3nzt_A Glutamate--cysteine ligase; structural genomics, center for structural genomics of infec diseases, csgid, alpha and beta proteins; HET: AMP; 2.00A {Francisella tularensis subsp}
Probab=65.02 E-value=20 Score=37.59 Aligned_cols=49 Identities=8% Similarity=-0.076 Sum_probs=35.6
Q ss_pred eecCCCCCCcEEEEecCCh-HHHHhHHHHHHHHHHHHHH-HHcCcEEeecc
Q 013989 248 GTNGEVMPGQWEYQVGPSV-GIDAGDHIWCSRYLLERIT-EQAGVVLSLDP 296 (432)
Q Consensus 248 ~~h~E~gpGQ~Ei~l~p~~-~l~aaD~l~~~R~~ik~VA-~~~Gl~aTFmP 296 (432)
.+.+|..-.|.|+...++. .-++-+.|-..+.++.+.+ ....+-+.=||
T Consensus 67 ~IttDfsEsqlE~iTp~~~s~~ea~~~L~~l~~~v~~~l~~~E~LWp~SmP 117 (525)
T 3nzt_A 67 SITVDFSENLLELITKPHDSIDKAIGELYQLSAFTLDNMHSDEIILNTSMP 117 (525)
T ss_dssp SEEESSBTTEEEEECCCBSSHHHHHHHHHHHHHHHHHHSCTTEEECCSSSC
T ss_pred CCCchhhhhHhhhcCCCCCCHHHHHHHHHHHHHHHHHhhCCCCeEEeecCC
Confidence 4566888889999998874 6667788888888877776 55555554475
No 20
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=60.81 E-value=5.6 Score=30.63 Aligned_cols=64 Identities=14% Similarity=0.119 Sum_probs=43.9
Q ss_pred HHHHHHHHHHcCCceeeecCCCCCCcEEEEecCChHHHHhHHHHHHHHHHHHHHHHcCcEEeeccc
Q 013989 232 ADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPK 297 (432)
Q Consensus 232 ~~~i~~al~~~GI~ie~~h~E~gpGQ~Ei~l~p~~~l~aaD~l~~~R~~ik~VA~~~Gl~aTFmPK 297 (432)
+.++...+.+.|++|..++.....|.+.+.+.-.- .-.+++-..+.-++++++++|+.+++.+.
T Consensus 19 la~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~--~~~~~l~~l~~~L~~~~~~~~~~~~~~~~ 82 (91)
T 1zpv_A 19 VAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSS--DEKQDFTYLRNEFEAFGQTLNVKINIQSA 82 (91)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEE--SSCCCHHHHHHHHHHHHHHHTEEEEEEEG
T ss_pred HHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEe--CCCCCHHHHHHHHHHHHHHcCCEEEEeeH
Confidence 44444567789999998887766677766655321 01224445677789999999999988754
No 21
>3ose_A Serine/threonine-protein kinase MARK1; kinase associated-1(Ka1) domain, transferase, lipid binding membrane association; 1.70A {Homo sapiens} SCOP: d.129.6.1 PDB: 1ul7_A
Probab=41.83 E-value=30 Score=28.85 Aligned_cols=63 Identities=11% Similarity=0.067 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHcCCceeeecC-------C----CCCCcEEEEecCChH-----HH---HhHHHHHHHHHHHHHHHHc
Q 013989 228 GRDIADAHYKACLYAGINISGTNG-------E----VMPGQWEYQVGPSVG-----ID---AGDHIWCSRYLLERITEQA 288 (432)
Q Consensus 228 ~~~i~~~i~~al~~~GI~ie~~h~-------E----~gpGQ~Ei~l~p~~~-----l~---aaD~l~~~R~~ik~VA~~~ 288 (432)
-.+|+.+|.++|.+.||..+.-+. + ...-|||+++---+. +. ..=..|.||.++.+|..+.
T Consensus 39 P~eIm~eI~rvL~~~gi~~~~~g~y~l~C~~~~~~~~~~v~fElEVckl~~~~l~gV~~kRi~Gd~~~yk~lc~~il~~L 118 (120)
T 3ose_A 39 PNDMMREIRKVLDANNCDYEQKERFLLFCVHGDARQDSLVQWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANEL 118 (120)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEETTEEEEEESCTTTTCCEEEEEEEEEEGGGTEEEEEEEEEESCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHCCCEEEEcCCEEEEEEecCCCCCccEEEEEEEEEecCCCceeEEEEecCCCHHHHHHHHHHHHHHh
Confidence 489999999999999998887432 1 123589988754331 11 2224568999999998876
Q ss_pred Cc
Q 013989 289 GV 290 (432)
Q Consensus 289 Gl 290 (432)
.+
T Consensus 119 ~L 120 (120)
T 3ose_A 119 KL 120 (120)
T ss_dssp CC
T ss_pred cC
Confidence 53
No 22
>1v5s_A MAP/microtubule affinity-regulating kinase 3; Ka1 domain, ELKL motif, MARK3, phosphorylation, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.129.6.1
Probab=37.39 E-value=65 Score=27.24 Aligned_cols=63 Identities=13% Similarity=0.119 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHcCCceeee--------cCCC---CCCcEEEEecCChHH-----H---HhHHHHHHHHHHHHHHHHc
Q 013989 228 GRDIADAHYKACLYAGINISGT--------NGEV---MPGQWEYQVGPSVGI-----D---AGDHIWCSRYLLERITEQA 288 (432)
Q Consensus 228 ~~~i~~~i~~al~~~GI~ie~~--------h~E~---gpGQ~Ei~l~p~~~l-----~---aaD~l~~~R~~ik~VA~~~ 288 (432)
-.+|+.+++++|.+.||+.+.. |... ..=|||+++---+.+ . ..-+.|.||.++.+|..+.
T Consensus 39 P~eIm~EI~rvL~~~~i~~k~~~~y~L~C~~~~~~~~~~vkfEiEVcKvp~l~l~GI~fKRisGd~w~YK~lc~~IL~eL 118 (126)
T 1v5s_A 39 SGDMMREIRKVLGANNCDYEQRERFLLFCVHGDGHAENLVQWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANEL 118 (126)
T ss_dssp HHHHHHHHHHHHHHTTEEEEEEETTEEEEEECSSSTTTCEEEEEECCCCTTTCSCCCEEEEEESCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCcEEEECCEEEEEEECCCCCCceEEEEEEEEEecCCCceeEEEeeccCchhHHHHHHHHHHHHH
Confidence 3899999999999999988861 2111 123899998633211 1 2224589999999999988
Q ss_pred Cc
Q 013989 289 GV 290 (432)
Q Consensus 289 Gl 290 (432)
.+
T Consensus 119 kL 120 (126)
T 1v5s_A 119 KL 120 (126)
T ss_dssp TC
T ss_pred hc
Confidence 75
No 23
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=34.33 E-value=1.7e+02 Score=25.38 Aligned_cols=66 Identities=14% Similarity=0.088 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHcCCceeeecCCCCCCcEEEEecCChHHHHhHHHHHHHHHHHHHHHHcCcEEeecccc
Q 013989 230 DIADAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKP 298 (432)
Q Consensus 230 ~i~~~i~~al~~~GI~ie~~h~E~gpGQ~Ei~l~p~~~l~aaD~l~~~R~~ik~VA~~~Gl~aTFmPKP 298 (432)
.++.++...|...|++|....--...|+|=+.+.-..+. +..-.++..+..++.+.|+...+.+.+
T Consensus 18 Giva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~~~---~~~~~l~~~L~~~~~~~~~~~~~~~~~ 83 (192)
T 1u8s_A 18 GICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGSP---SNITRVETTLPLLGQQHDLITMMKRTS 83 (192)
T ss_dssp THHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEECH---HHHHHHHHHHHHHHHHHTCEEEEEEEC
T ss_pred cHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEecCC---CCHHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 355566667889999998766544567776544332221 345566888888999999998876443
No 24
>3tc3_A UV damage endonuclease; TIM-barrel, hydrolase; 1.50A {Sulfolobus acidocaldarius}
Probab=25.29 E-value=82 Score=30.73 Aligned_cols=61 Identities=8% Similarity=-0.027 Sum_probs=41.1
Q ss_pred HHHHHHHcCCceeeecCCCCCC--cEEEEecCChHHHHhHHHHHHHHHHHHHHHHcCcEEeecccccCC
Q 013989 235 HYKACLYAGINISGTNGEVMPG--QWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKPIEG 301 (432)
Q Consensus 235 i~~al~~~GI~ie~~h~E~gpG--Q~Ei~l~p~~~l~aaD~l~~~R~~ik~VA~~~Gl~aTFmPKP~~~ 301 (432)
+.+.+.+.||.+--+..+.-|- ..|+ ++...-.+.+. =.-+.++|+++|++.||+|=+|.-
T Consensus 65 il~~n~~~~I~~yRiSS~l~P~~thp~~--~~~~~~~~~~~----l~~iG~~a~~~~iRLS~HPgqF~v 127 (310)
T 3tc3_A 65 ILEWNLKHEILFFRISSNTIPLASHPKF--HVNWKDKLSHI----LGDIGDFIKENSIRISMHPGQYVV 127 (310)
T ss_dssp HHHHHHHTTCCEEECCTTSSTTTTSTTC--CCCHHHHTHHH----HHHHHHHHHHTTCEEEECCCTTCC
T ss_pred HHHHHHHcCCEEEEeCcccCCCcccccc--ccchHHHHHHH----HHHHHHHHHHcCcEEEecCCCCcc
Confidence 5568899999999988887773 2222 22211122222 234678899999999999999864
No 25
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=24.83 E-value=63 Score=28.69 Aligned_cols=66 Identities=18% Similarity=0.039 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHcCCceeeecCCC------CCCcEEEEecCChHHHHhHHHHHHHHHHHHHHHHcCcEEeecccc
Q 013989 230 DIADAHYKACLYAGINISGTNGEV------MPGQWEYQVGPSVGIDAGDHIWCSRYLLERITEQAGVVLSLDPKP 298 (432)
Q Consensus 230 ~i~~~i~~al~~~GI~ie~~h~E~------gpGQ~Ei~l~p~~~l~aaD~l~~~R~~ik~VA~~~Gl~aTFmPKP 298 (432)
-|+.++...|.+.|++|..++.-. ..+.|-+.+.-.-+ ...| -.+|.-+..+|+++|+...|.|--
T Consensus 105 Giva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~~~-~~~~--~~l~~~l~~~a~~l~~di~~~~~~ 176 (195)
T 2nyi_A 105 GIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSRVAFP-FPLY--QEVVTALSRVEEEFGVDIDLEEVV 176 (195)
T ss_dssp THHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEEEEEE-GGGH--HHHHHHHHHHHHHHTCEEEEEECC
T ss_pred CHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEEEEcC-CCcc--HHHHHHHHHHHHHcCeEEEEEECc
Confidence 566666777889999998766543 34666655544322 1223 456888889999999999998643
Done!