Query 013991
Match_columns 432
No_of_seqs 410 out of 1619
Neff 10.7
Searched_HMMs 46136
Date Fri Mar 29 00:46:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013991.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013991hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK14995 methyl viologen resis 100.0 1E-32 2.2E-37 268.1 33.6 358 40-428 5-396 (495)
2 COG2814 AraJ Arabinose efflux 100.0 8.1E-33 1.8E-37 249.9 30.0 288 37-376 9-298 (394)
3 PRK10406 alpha-ketoglutarate t 100.0 1.1E-31 2.4E-36 256.8 32.2 344 42-427 23-380 (432)
4 TIGR00903 2A0129 major facilit 100.0 5.3E-32 1.2E-36 251.9 29.1 316 54-427 4-324 (368)
5 TIGR02332 HpaX 4-hydroxyphenyl 100.0 1.2E-31 2.5E-36 254.8 31.3 363 38-428 5-378 (412)
6 KOG2615 Permease of the major 100.0 5.9E-33 1.3E-37 242.5 19.6 350 57-427 41-396 (451)
7 TIGR00711 efflux_EmrB drug res 100.0 1.3E-31 2.9E-36 261.1 30.9 357 42-428 3-393 (485)
8 TIGR01299 synapt_SV2 synaptic 100.0 6.7E-32 1.4E-36 267.3 29.0 365 43-427 169-692 (742)
9 TIGR00891 2A0112 putative sial 100.0 2.6E-31 5.6E-36 252.9 30.7 359 37-427 8-372 (405)
10 COG2271 UhpC Sugar phosphate p 100.0 1.8E-32 3.8E-37 244.1 20.6 349 41-426 29-389 (448)
11 TIGR00900 2A0121 H+ Antiporter 100.0 1.9E-31 4E-36 250.2 28.7 336 46-428 4-346 (365)
12 TIGR00893 2A0114 d-galactonate 100.0 1.8E-31 3.8E-36 253.1 28.1 347 51-428 4-356 (399)
13 PRK03545 putative arabinose tr 100.0 5.9E-31 1.3E-35 248.9 31.1 328 40-427 8-337 (390)
14 PRK09556 uhpT sugar phosphate 100.0 5.1E-32 1.1E-36 261.7 23.7 354 43-427 31-393 (467)
15 PF07690 MFS_1: Major Facilita 100.0 4.3E-31 9.4E-36 246.5 27.3 338 47-428 2-344 (352)
16 PRK11551 putative 3-hydroxyphe 100.0 1.2E-30 2.6E-35 248.3 30.7 336 38-427 12-352 (406)
17 TIGR00710 efflux_Bcr_CflA drug 100.0 3E-30 6.6E-35 243.9 32.5 338 41-428 5-344 (385)
18 PRK10642 proline/glycine betai 100.0 1.7E-30 3.7E-35 252.4 31.0 357 41-426 16-385 (490)
19 PRK12307 putative sialic acid 100.0 2.8E-30 6.2E-35 247.4 30.4 346 39-427 16-365 (426)
20 PRK11663 regulatory protein Uh 100.0 2.7E-30 5.8E-35 247.4 29.4 351 42-427 24-381 (434)
21 PRK10504 putative transporter; 100.0 1.2E-29 2.7E-34 246.0 34.0 357 40-428 9-398 (471)
22 PRK10213 nepI ribonucleoside t 100.0 1.9E-29 4.1E-34 238.2 34.0 322 39-422 18-343 (394)
23 PRK10133 L-fucose transporter; 100.0 1.1E-29 2.4E-34 242.4 31.0 345 40-424 25-387 (438)
24 TIGR00881 2A0104 phosphoglycer 100.0 1.2E-30 2.7E-35 245.8 23.9 347 49-428 3-355 (379)
25 TIGR00890 2A0111 Oxalate/Forma 100.0 4.7E-30 1E-34 241.7 27.5 324 53-428 15-340 (377)
26 PRK11195 lysophospholipid tran 100.0 2.7E-29 5.9E-34 237.0 30.6 335 42-429 4-340 (393)
27 PRK15402 multidrug efflux syst 100.0 3.6E-29 7.7E-34 238.1 31.6 335 45-428 17-353 (406)
28 PRK09705 cynX putative cyanate 100.0 4.9E-29 1.1E-33 235.5 31.7 310 58-427 26-337 (393)
29 PRK09952 shikimate transporter 100.0 4.8E-29 1E-33 238.7 31.7 352 41-427 22-387 (438)
30 PRK15075 citrate-proton sympor 100.0 6.3E-29 1.4E-33 238.0 31.6 344 40-426 14-374 (434)
31 PRK10077 xylE D-xylose transpo 100.0 8.6E-29 1.9E-33 240.8 32.6 364 40-427 11-408 (479)
32 PRK15403 multidrug efflux syst 100.0 1.4E-28 3E-33 233.6 32.2 335 45-429 20-357 (413)
33 PRK05122 major facilitator sup 100.0 1.3E-28 2.8E-33 233.8 31.9 324 39-427 13-346 (399)
34 TIGR00879 SP MFS transporter, 100.0 1.7E-29 3.7E-34 245.7 26.0 354 46-428 33-428 (481)
35 TIGR00886 2A0108 nitrite extru 100.0 2.7E-29 5.9E-34 235.7 26.3 352 43-427 3-361 (366)
36 TIGR00895 2A0115 benzoate tran 100.0 5.4E-29 1.2E-33 236.3 28.2 354 40-428 16-383 (398)
37 PRK03633 putative MFS family t 100.0 2.6E-28 5.7E-33 229.9 31.8 321 41-425 6-327 (381)
38 PRK12382 putative transporter; 100.0 2.3E-28 5E-33 231.5 31.5 323 40-427 14-346 (392)
39 PLN00028 nitrate transmembrane 100.0 7.1E-29 1.5E-33 239.7 28.4 284 40-354 35-318 (476)
40 PRK15034 nitrate/nitrite trans 100.0 1.8E-28 3.9E-33 229.7 29.2 290 37-368 30-330 (462)
41 TIGR00887 2A0109 phosphate:H+ 100.0 7E-29 1.5E-33 241.9 27.5 374 39-427 14-436 (502)
42 PRK11102 bicyclomycin/multidru 100.0 2E-28 4.3E-33 230.8 29.2 325 55-428 5-331 (377)
43 PRK10091 MFS transport protein 100.0 3.2E-28 7E-33 229.3 30.1 279 41-372 3-283 (382)
44 PRK11043 putative transporter; 100.0 7.1E-28 1.5E-32 228.8 32.3 333 43-429 8-341 (401)
45 PRK03699 putative transporter; 100.0 8.3E-28 1.8E-32 227.5 32.1 327 40-423 6-333 (394)
46 PRK11273 glpT sn-glycerol-3-ph 100.0 1.7E-28 3.7E-33 236.2 27.1 346 47-427 35-391 (452)
47 PRK10489 enterobactin exporter 100.0 2E-28 4.4E-33 233.6 25.9 333 43-428 19-357 (417)
48 PRK03893 putative sialic acid 100.0 5.9E-28 1.3E-32 235.9 29.7 357 39-427 18-410 (496)
49 TIGR00898 2A0119 cation transp 100.0 1.7E-28 3.7E-33 240.2 25.7 327 62-427 110-454 (505)
50 PRK11646 multidrug resistance 100.0 1.8E-27 3.9E-32 225.2 31.5 327 44-428 13-342 (400)
51 PRK09874 drug efflux system pr 100.0 2E-27 4.3E-32 226.4 31.3 340 41-427 14-355 (408)
52 KOG1330 Sugar transporter/spin 100.0 1.2E-29 2.6E-34 228.2 14.9 351 36-427 28-393 (493)
53 TIGR00892 2A0113 monocarboxyla 100.0 2E-27 4.4E-32 228.4 30.2 353 40-428 18-378 (455)
54 PRK11652 emrD multidrug resist 100.0 3.3E-27 7.2E-32 223.7 31.2 335 39-427 6-342 (394)
55 TIGR00899 2A0120 sugar efflux 100.0 4.4E-27 9.5E-32 221.5 31.3 323 48-428 4-332 (375)
56 TIGR00894 2A0114euk Na(+)-depe 100.0 1E-27 2.3E-32 232.0 27.5 283 40-354 18-327 (465)
57 TIGR00897 2A0118 polyol permea 100.0 7.6E-27 1.6E-31 221.5 32.4 340 41-428 13-359 (402)
58 TIGR00885 fucP L-fucose:H+ sym 100.0 8.3E-27 1.8E-31 220.6 32.2 344 42-423 4-361 (410)
59 KOG0569 Permease of the major 100.0 2.5E-27 5.4E-32 220.9 27.8 345 68-428 46-413 (485)
60 TIGR00902 2A0127 phenyl propri 100.0 9.7E-27 2.1E-31 219.2 32.2 324 44-426 7-335 (382)
61 PRK10473 multidrug efflux syst 100.0 8.9E-27 1.9E-31 220.6 32.0 283 43-374 5-289 (392)
62 TIGR00712 glpT glycerol-3-phos 100.0 9.8E-28 2.1E-32 230.1 24.5 354 42-427 28-389 (438)
63 COG2223 NarK Nitrate/nitrite t 100.0 5.7E-28 1.2E-32 215.9 20.3 292 37-375 10-305 (417)
64 PRK10054 putative transporter; 100.0 6.2E-27 1.3E-31 221.1 28.7 331 41-425 7-340 (395)
65 cd06174 MFS The Major Facilita 100.0 9E-27 2E-31 217.1 29.4 306 45-428 3-310 (352)
66 TIGR00883 2A0106 metabolite-pr 100.0 4.3E-27 9.3E-32 222.9 27.1 333 51-425 3-354 (394)
67 TIGR00901 2A0125 AmpG-related 100.0 3.6E-26 7.7E-31 213.7 30.9 331 56-427 3-353 (356)
68 TIGR00896 CynX cyanate transpo 100.0 2.5E-26 5.5E-31 214.5 29.5 313 55-426 14-329 (355)
69 PRK11128 putative 3-phenylprop 100.0 1.1E-25 2.4E-30 212.1 29.7 318 50-426 13-335 (382)
70 PRK15011 sugar efflux transpor 99.9 1.3E-24 2.9E-29 205.5 33.8 325 42-426 16-347 (393)
71 PF05977 MFS_3: Transmembrane 99.9 3E-25 6.5E-30 213.2 28.5 341 37-428 6-352 (524)
72 KOG2532 Permease of the major 99.9 1.4E-25 3E-30 211.8 25.3 277 69-378 66-357 (466)
73 PRK08633 2-acyl-glycerophospho 99.9 1.1E-25 2.5E-30 241.2 28.1 351 41-428 9-367 (1146)
74 TIGR00805 oat sodium-independe 99.9 9E-27 1.9E-31 230.4 18.0 311 45-370 37-415 (633)
75 PRK11010 ampG muropeptide tran 99.9 1.1E-24 2.4E-29 210.9 32.2 339 39-426 10-359 (491)
76 KOG0254 Predicted transporter 99.9 8.6E-25 1.9E-29 213.3 29.8 362 47-427 51-439 (513)
77 KOG2533 Permease of the major 99.9 1.2E-25 2.7E-30 212.5 22.5 344 46-418 50-402 (495)
78 PRK06814 acylglycerophosphoeth 99.9 6.9E-25 1.5E-29 234.4 29.2 307 84-428 54-379 (1140)
79 PRK11902 ampG muropeptide tran 99.9 5.8E-24 1.3E-28 201.9 31.4 328 47-422 5-346 (402)
80 PRK10207 dipeptide/tripeptide 99.9 7E-24 1.5E-28 204.3 30.8 361 39-428 12-424 (489)
81 COG0738 FucP Fucose permease [ 99.9 1.4E-23 3.1E-28 186.5 28.3 337 39-416 11-357 (422)
82 TIGR00924 yjdL_sub1_fam amino 99.9 2.1E-23 4.6E-28 200.9 32.1 364 41-427 10-425 (475)
83 TIGR00889 2A0110 nucleoside tr 99.9 1.4E-23 3E-28 199.5 29.8 333 45-426 6-351 (418)
84 KOG3764 Vesicular amine transp 99.9 1.3E-25 2.8E-30 197.9 12.9 316 45-407 25-389 (464)
85 TIGR00882 2A0105 oligosacchari 99.9 1.9E-23 4.1E-28 198.0 28.4 335 41-423 2-347 (396)
86 PRK09528 lacY galactoside perm 99.9 1.3E-23 2.9E-28 200.6 25.8 336 41-423 10-355 (420)
87 PF06609 TRI12: Fungal trichot 99.9 3.3E-22 7.1E-27 191.5 32.2 344 53-429 56-451 (599)
88 KOG2504 Monocarboxylate transp 99.9 3.5E-22 7.6E-27 191.1 28.2 354 40-429 45-434 (509)
89 TIGR00806 rfc RFC reduced fola 99.9 5.5E-22 1.2E-26 182.6 27.9 357 40-429 25-399 (511)
90 TIGR00792 gph sugar (Glycoside 99.9 1.9E-22 4E-27 194.0 24.5 326 57-427 15-362 (437)
91 TIGR02718 sider_RhtX_FptX side 99.9 4E-21 8.7E-26 181.8 32.2 336 43-427 3-348 (390)
92 KOG0253 Synaptic vesicle trans 99.9 2.9E-22 6.3E-27 174.7 20.7 354 39-423 76-474 (528)
93 PRK09584 tppB putative tripept 99.9 1.1E-20 2.3E-25 183.3 30.5 359 41-425 21-424 (500)
94 KOG0255 Synaptic vesicle trans 99.9 5.4E-21 1.2E-25 187.7 27.4 318 69-425 111-448 (521)
95 PF00083 Sugar_tr: Sugar (and 99.9 1.6E-26 3.4E-31 223.1 -17.2 362 48-427 7-393 (451)
96 COG2807 CynX Cyanate permease 99.9 3.9E-19 8.4E-24 156.0 30.3 311 56-426 27-340 (395)
97 KOG0252 Inorganic phosphate tr 99.9 5.4E-23 1.2E-27 184.7 5.1 377 37-425 34-448 (538)
98 PF03825 Nuc_H_symport: Nucleo 99.9 1E-18 2.2E-23 163.5 30.7 336 45-427 6-345 (400)
99 PRK15462 dipeptide/tripeptide 99.9 1.4E-18 3E-23 165.2 31.8 361 40-426 8-420 (493)
100 TIGR01301 GPH_sucrose GPH fami 99.9 7.3E-19 1.6E-23 166.4 28.8 366 39-427 2-426 (477)
101 PRK09669 putative symporter Ya 99.8 2E-18 4.3E-23 166.0 27.0 330 38-414 6-350 (444)
102 KOG4686 Predicted sugar transp 99.8 1.6E-20 3.4E-25 158.3 9.7 342 44-427 47-396 (459)
103 PRK10429 melibiose:sodium symp 99.8 2.3E-18 5E-23 166.7 25.8 335 41-414 6-355 (473)
104 TIGR00788 fbt folate/biopterin 99.8 4.8E-19 1.1E-23 170.3 20.0 356 39-428 24-396 (468)
105 PTZ00207 hypothetical protein; 99.8 9.6E-18 2.1E-22 162.0 26.6 129 58-194 44-180 (591)
106 PF13347 MFS_2: MFS/sugar tran 99.8 1E-18 2.2E-23 167.3 18.9 321 62-427 23-366 (428)
107 PRK09848 glucuronide transport 99.8 3.8E-17 8.2E-22 157.5 28.2 339 38-428 5-371 (448)
108 PF01306 LacY_symp: LacY proto 99.8 5.2E-17 1.1E-21 149.2 24.8 337 40-424 6-353 (412)
109 KOG2816 Predicted transporter 99.8 9.2E-17 2E-21 151.4 25.7 346 45-429 26-376 (463)
110 KOG2325 Predicted transporter/ 99.8 4E-17 8.7E-22 151.6 22.5 200 36-246 29-239 (488)
111 COG2211 MelB Na+/melibiose sym 99.8 1.5E-16 3.3E-21 147.6 23.9 336 37-414 8-358 (467)
112 TIGR01272 gluP glucose/galacto 99.8 1.6E-16 3.5E-21 144.5 23.5 261 130-423 5-269 (310)
113 PRK11462 putative transporter; 99.8 1.4E-15 3E-20 146.4 29.4 327 39-413 7-348 (460)
114 PF11700 ATG22: Vacuole efflux 99.7 4.5E-15 9.8E-20 141.6 31.2 321 81-427 69-424 (477)
115 KOG2563 Permease of the major 99.7 2.1E-15 4.5E-20 136.4 21.1 341 43-422 47-398 (480)
116 COG3104 PTR2 Dipeptide/tripept 99.7 3E-14 6.6E-19 131.2 27.5 364 41-428 21-439 (498)
117 PF03137 OATP: Organic Anion T 99.7 2.6E-18 5.6E-23 166.0 -0.2 308 45-364 7-384 (539)
118 COG2270 Permeases of the major 99.7 3.6E-14 7.8E-19 127.9 25.2 322 79-427 55-385 (438)
119 PF03209 PUCC: PUCC protein; 99.7 1E-13 2.2E-18 125.4 27.8 315 67-425 6-343 (403)
120 KOG3626 Organic anion transpor 99.7 1.6E-15 3.5E-20 146.7 15.4 310 45-366 101-473 (735)
121 PRK10642 proline/glycine betai 99.6 2.8E-14 6.1E-19 138.9 18.6 174 51-245 260-438 (490)
122 TIGR00889 2A0110 nucleoside tr 99.6 1.1E-14 2.4E-19 138.5 15.0 174 59-242 226-408 (418)
123 TIGR01299 synapt_SV2 synaptic 99.6 3.4E-14 7.4E-19 141.8 18.3 140 85-241 598-738 (742)
124 PF05631 DUF791: Protein of un 99.6 7.5E-13 1.6E-17 117.9 23.3 264 54-363 47-318 (354)
125 PRK15011 sugar efflux transpor 99.6 9E-14 2E-18 131.6 18.1 156 60-238 235-392 (393)
126 TIGR00880 2_A_01_02 Multidrug 99.6 2.5E-14 5.5E-19 114.3 11.6 136 87-238 3-140 (141)
127 PRK11551 putative 3-hydroxyphe 99.6 1.2E-13 2.6E-18 131.5 16.9 135 55-195 234-369 (406)
128 TIGR00890 2A0111 Oxalate/Forma 99.6 5.1E-14 1.1E-18 132.5 14.1 144 46-195 210-356 (377)
129 PRK09528 lacY galactoside perm 99.6 2.3E-14 5E-19 137.0 11.9 139 84-238 264-405 (420)
130 PRK05122 major facilitator sup 99.6 1.7E-13 3.6E-18 130.3 17.2 159 58-240 233-392 (399)
131 TIGR00902 2A0127 phenyl propri 99.5 1.8E-13 3.9E-18 129.1 16.4 149 40-195 204-354 (382)
132 TIGR00899 2A0120 sugar efflux 99.5 5.5E-13 1.2E-17 125.6 17.3 154 62-238 220-375 (375)
133 cd06174 MFS The Major Facilita 99.5 5.3E-13 1.1E-17 124.2 17.0 163 50-234 184-349 (352)
134 PRK10489 enterobactin exporter 99.5 4E-13 8.6E-18 128.4 15.1 162 60-243 242-406 (417)
135 PRK09874 drug efflux system pr 99.5 4.9E-13 1.1E-17 127.5 15.4 159 57-233 235-394 (408)
136 TIGR00892 2A0113 monocarboxyla 99.5 2.3E-13 5E-18 131.2 12.4 149 41-195 241-394 (455)
137 PRK09705 cynX putative cyanate 99.5 2.6E-12 5.7E-17 121.6 19.3 179 42-243 206-388 (393)
138 PRK12382 putative transporter; 99.5 1.1E-12 2.4E-17 124.3 16.7 154 56-233 231-385 (392)
139 PRK03633 putative MFS family t 99.5 1.8E-12 3.9E-17 122.3 16.9 129 58-195 217-346 (381)
140 TIGR00897 2A0118 polyol permea 99.5 1.5E-12 3.3E-17 123.7 15.9 172 42-236 223-400 (402)
141 PRK03699 putative transporter; 99.5 1.6E-12 3.4E-17 123.2 15.3 147 42-195 206-354 (394)
142 PRK03545 putative arabinose tr 99.4 3.9E-12 8.5E-17 120.4 17.6 145 65-233 230-376 (390)
143 TIGR00893 2A0114 d-galactonate 99.4 3.5E-12 7.6E-17 120.7 17.1 148 41-195 215-372 (399)
144 PRK03893 putative sialic acid 99.4 3.4E-12 7.3E-17 125.0 16.2 131 59-195 293-427 (496)
145 PRK09952 shikimate transporter 99.4 6.2E-12 1.4E-16 120.7 17.4 168 52-239 261-435 (438)
146 TIGR00879 SP MFS transporter, 99.4 5.1E-12 1.1E-16 122.9 16.9 174 45-240 288-474 (481)
147 TIGR00883 2A0106 metabolite-pr 99.4 1.7E-12 3.7E-17 122.9 12.7 147 43-195 221-374 (394)
148 PF01770 Folate_carrier: Reduc 99.4 6.7E-10 1.4E-14 102.0 28.3 336 65-429 28-386 (412)
149 PRK11128 putative 3-phenylprop 99.4 7.7E-12 1.7E-16 118.0 16.4 147 42-195 206-354 (382)
150 PRK09556 uhpT sugar phosphate 99.4 8.4E-12 1.8E-16 121.0 15.5 149 41-195 258-411 (467)
151 TIGR00895 2A0115 benzoate tran 99.4 6.1E-12 1.3E-16 119.3 13.0 142 46-193 255-397 (398)
152 PRK11273 glpT sn-glycerol-3-ph 99.4 1.1E-11 2.4E-16 119.6 14.7 172 41-234 253-432 (452)
153 TIGR00887 2A0109 phosphate:H+ 99.4 1.4E-11 3.1E-16 120.5 15.2 178 59-242 306-494 (502)
154 PRK11663 regulatory protein Uh 99.4 2.4E-11 5.2E-16 116.6 16.3 167 42-231 244-418 (434)
155 TIGR00900 2A0121 H+ Antiporter 99.3 6E-12 1.3E-16 117.9 11.4 128 62-195 232-362 (365)
156 TIGR00891 2A0112 putative sial 99.3 1.1E-11 2.4E-16 117.9 13.2 130 60-195 257-389 (405)
157 PF11700 ATG22: Vacuole efflux 99.3 6.2E-11 1.3E-15 113.4 17.2 179 41-240 281-471 (477)
158 PRK12307 putative sialic acid 99.3 3.8E-11 8.2E-16 115.2 15.4 130 60-195 250-382 (426)
159 PF06963 FPN1: Ferroportin1 (F 99.3 1E-08 2.2E-13 96.0 30.8 354 42-425 3-398 (432)
160 PRK10504 putative transporter; 99.3 4.6E-11 1E-15 116.1 15.7 149 41-195 261-414 (471)
161 PF05977 MFS_3: Transmembrane 99.3 1.4E-10 3.1E-15 112.2 18.7 137 53-195 230-368 (524)
162 COG2814 AraJ Arabinose efflux 99.3 1.5E-10 3.3E-15 105.7 17.0 173 39-235 209-384 (394)
163 TIGR00882 2A0105 oligosacchari 99.3 5.2E-11 1.1E-15 113.0 14.2 129 84-228 256-386 (396)
164 KOG0569 Permease of the major 99.3 3.3E-10 7.2E-15 106.7 17.6 168 53-243 282-461 (485)
165 PF03092 BT1: BT1 family; Int 99.3 1.5E-10 3.3E-15 110.1 15.5 334 61-427 10-362 (433)
166 PLN00028 nitrate transmembrane 99.3 6.5E-11 1.4E-15 114.8 13.2 153 61-237 272-433 (476)
167 TIGR02718 sider_RhtX_FptX side 99.3 8.4E-11 1.8E-15 111.3 13.7 158 51-230 218-384 (390)
168 TIGR00898 2A0119 cation transp 99.3 6.9E-11 1.5E-15 116.0 13.4 137 88-242 361-500 (505)
169 TIGR00792 gph sugar (Glycoside 99.2 3E-11 6.5E-16 116.3 10.2 148 41-195 222-379 (437)
170 PRK10077 xylE D-xylose transpo 99.2 6.8E-10 1.5E-14 108.2 19.7 132 57-194 287-424 (479)
171 PRK15075 citrate-proton sympor 99.2 1.2E-10 2.7E-15 111.8 14.2 137 53-195 250-393 (434)
172 TIGR00881 2A0104 phosphoglycer 99.2 5.7E-11 1.2E-15 111.8 11.7 147 43-195 218-371 (379)
173 PRK15402 multidrug efflux syst 99.2 2E-10 4.4E-15 109.4 15.4 127 62-195 236-369 (406)
174 TIGR00712 glpT glycerol-3-phos 99.2 1.7E-10 3.7E-15 111.0 14.7 176 43-240 253-437 (438)
175 TIGR00896 CynX cyanate transpo 99.2 3E-10 6.5E-15 106.1 16.0 148 42-196 198-348 (355)
176 PRK11010 ampG muropeptide tran 99.2 2.5E-09 5.3E-14 104.1 22.6 153 65-239 247-405 (491)
177 COG2271 UhpC Sugar phosphate p 99.2 1.3E-10 2.7E-15 105.1 12.4 159 39-210 250-416 (448)
178 PRK10213 nepI ribonucleoside t 99.2 6.2E-10 1.4E-14 105.4 17.6 125 64-195 240-365 (394)
179 PRK10054 putative transporter; 99.2 1.4E-10 2.9E-15 109.9 12.9 111 84-195 246-358 (395)
180 KOG2504 Monocarboxylate transp 99.2 1.9E-10 4.1E-15 110.8 13.5 176 41-237 298-476 (509)
181 PRK10406 alpha-ketoglutarate t 99.2 7.1E-10 1.5E-14 106.5 16.7 135 54-194 256-397 (432)
182 COG2270 Permeases of the major 99.2 5.3E-10 1.2E-14 101.3 13.7 177 42-239 253-431 (438)
183 PF03825 Nuc_H_symport: Nucleo 99.2 7.3E-10 1.6E-14 104.1 15.2 183 41-239 207-398 (400)
184 PRK11646 multidrug resistance 99.1 5.1E-10 1.1E-14 106.2 13.2 129 61-195 228-358 (400)
185 PRK10091 MFS transport protein 99.1 1.3E-09 2.9E-14 102.8 15.8 123 65-195 224-349 (382)
186 TIGR01272 gluP glucose/galacto 99.1 1.5E-09 3.2E-14 98.9 14.6 146 41-195 140-289 (310)
187 PRK11902 ampG muropeptide tran 99.1 8.9E-10 1.9E-14 104.8 13.2 149 65-239 234-392 (402)
188 PF06813 Nodulin-like: Nodulin 99.1 6.1E-09 1.3E-13 90.1 16.7 132 56-195 17-156 (250)
189 TIGR00901 2A0125 AmpG-related 99.1 2.9E-10 6.3E-15 106.3 9.3 132 43-180 211-355 (356)
190 KOG4686 Predicted sugar transp 99.1 4.1E-09 8.9E-14 90.0 14.9 147 43-197 266-415 (459)
191 KOG0253 Synaptic vesicle trans 99.1 7.1E-10 1.5E-14 98.1 10.7 126 92-238 391-520 (528)
192 TIGR00894 2A0114euk Na(+)-depe 99.1 2.3E-09 5.1E-14 104.0 15.1 176 41-236 261-449 (465)
193 KOG0637 Sucrose transporter an 99.1 6.5E-09 1.4E-13 94.9 16.5 147 41-193 32-202 (498)
194 COG2223 NarK Nitrate/nitrite t 99.1 1.2E-09 2.7E-14 98.9 11.6 146 40-195 217-374 (417)
195 PF13347 MFS_2: MFS/sugar tran 99.1 4.5E-09 9.8E-14 100.8 16.2 151 40-196 224-384 (428)
196 TIGR00711 efflux_EmrB drug res 99.1 1.3E-09 2.9E-14 106.4 12.7 147 43-195 257-409 (485)
197 PRK08633 2-acyl-glycerophospho 99.0 3.2E-09 7E-14 114.7 15.6 131 59-195 250-383 (1146)
198 TIGR02332 HpaX 4-hydroxyphenyl 99.0 3.4E-09 7.3E-14 101.0 14.0 147 43-195 244-394 (412)
199 PRK10473 multidrug efflux syst 99.0 3.9E-09 8.4E-14 100.1 14.1 120 66-195 229-348 (392)
200 PF01306 LacY_symp: LacY proto 99.0 4.5E-09 9.8E-14 97.2 13.8 142 84-241 261-405 (412)
201 PRK14995 methyl viologen resis 99.0 3.2E-09 7E-14 103.7 13.6 143 47-195 265-412 (495)
202 PF07690 MFS_1: Major Facilita 99.0 9E-10 2E-14 102.6 9.1 135 47-187 212-352 (352)
203 TIGR00710 efflux_Bcr_CflA drug 99.0 5.1E-09 1.1E-13 98.9 14.1 123 61-190 226-356 (385)
204 PRK09848 glucuronide transport 99.0 8.4E-10 1.8E-14 106.5 8.3 149 41-195 228-387 (448)
205 PRK11195 lysophospholipid tran 99.0 3.5E-08 7.7E-13 93.4 17.6 122 66-194 231-354 (393)
206 TIGR00926 2A1704 Peptide:H+ sy 99.0 7.6E-07 1.6E-11 88.5 27.0 158 61-233 8-178 (654)
207 PRK06814 acylglycerophosphoeth 99.0 8.6E-09 1.9E-13 111.2 14.6 147 43-195 227-395 (1140)
208 PRK11043 putative transporter; 98.9 1.8E-08 3.9E-13 95.9 14.9 128 61-195 223-356 (401)
209 KOG3098 Uncharacterized conser 98.9 4.1E-07 8.9E-12 85.3 23.3 318 84-423 51-392 (461)
210 PRK10429 melibiose:sodium symp 98.9 1.9E-09 4E-14 104.7 8.2 150 41-196 231-393 (473)
211 TIGR00903 2A0129 major facilit 98.9 3.8E-08 8.2E-13 92.1 16.4 144 41-194 192-340 (368)
212 PRK11102 bicyclomycin/multidru 98.9 2.5E-08 5.3E-13 94.0 14.6 124 61-191 214-344 (377)
213 PRK09669 putative symporter Ya 98.9 6.2E-09 1.3E-13 100.3 10.2 113 84-196 266-388 (444)
214 PRK10133 L-fucose transporter; 98.9 1.9E-08 4.2E-13 96.5 13.2 119 68-195 287-406 (438)
215 PRK15034 nitrate/nitrite trans 98.9 4.4E-08 9.4E-13 92.9 15.1 148 41-195 252-427 (462)
216 TIGR00788 fbt folate/biopterin 98.8 1.2E-08 2.7E-13 98.5 9.8 122 69-196 281-413 (468)
217 COG0477 ProP Permeases of the 98.8 2.1E-07 4.5E-12 84.6 16.8 142 48-195 9-157 (338)
218 PF02487 CLN3: CLN3 protein; 98.8 2.5E-06 5.4E-11 78.8 23.2 175 45-239 4-198 (402)
219 TIGR00769 AAA ADP/ATP carrier 98.8 8.2E-06 1.8E-10 77.7 26.7 292 41-366 7-345 (472)
220 KOG3574 Acetyl-CoA transporter 98.8 5.5E-07 1.2E-11 80.4 16.7 354 37-428 27-414 (510)
221 KOG2532 Permease of the major 98.8 1.3E-07 2.9E-12 90.2 13.8 180 36-236 247-446 (466)
222 KOG4332 Predicted sugar transp 98.8 9.7E-08 2.1E-12 81.1 11.2 322 53-423 49-384 (454)
223 PRK11652 emrD multidrug resist 98.7 2.2E-07 4.8E-12 88.1 14.2 123 66-195 233-359 (394)
224 COG2807 CynX Cyanate permease 98.7 9.5E-07 2.1E-11 78.8 16.6 148 43-197 210-360 (395)
225 COG2211 MelB Na+/melibiose sym 98.7 2.4E-07 5.1E-12 86.9 13.1 152 40-197 235-397 (467)
226 PRK11462 putative transporter; 98.7 2.2E-07 4.9E-12 89.7 13.4 147 43-195 230-386 (460)
227 KOG3762 Predicted transporter 98.7 3.9E-08 8.4E-13 91.6 7.5 151 47-210 377-529 (618)
228 TIGR00885 fucP L-fucose:H+ sym 98.7 3.1E-07 6.7E-12 87.4 13.2 146 43-195 234-380 (410)
229 TIGR00924 yjdL_sub1_fam amino 98.7 4.6E-07 1E-11 87.8 14.4 150 44-195 275-442 (475)
230 KOG3764 Vesicular amine transp 98.6 1.1E-07 2.5E-12 85.4 7.5 157 50-228 279-445 (464)
231 PF03209 PUCC: PUCC protein; 98.6 1.3E-06 2.8E-11 79.8 14.2 172 50-233 217-394 (403)
232 TIGR00886 2A0108 nitrite extru 98.6 9.9E-07 2.1E-11 82.7 13.6 129 284-425 3-132 (366)
233 KOG0252 Inorganic phosphate tr 98.6 5.3E-08 1.1E-12 89.1 4.3 194 41-245 304-506 (538)
234 PF00083 Sugar_tr: Sugar (and 98.6 4.5E-10 9.9E-15 108.6 -9.7 164 58-244 270-444 (451)
235 PRK15462 dipeptide/tripeptide 98.6 1.3E-06 2.9E-11 83.8 13.7 136 281-427 8-146 (493)
236 COG0738 FucP Fucose permease [ 98.5 9.4E-07 2E-11 80.0 11.5 148 39-195 234-383 (422)
237 PF06779 DUF1228: Protein of u 98.5 4E-07 8.7E-12 63.7 6.6 80 53-138 4-83 (85)
238 PF05978 UNC-93: Ion channel r 98.5 4E-06 8.8E-11 67.0 13.1 108 87-195 42-150 (156)
239 TIGR01301 GPH_sucrose GPH fami 98.5 5.4E-06 1.2E-10 79.3 15.5 187 41-241 258-476 (477)
240 PRK09584 tppB putative tripept 98.5 2.5E-06 5.4E-11 83.3 13.6 141 274-425 12-156 (500)
241 KOG3762 Predicted transporter 98.4 6.2E-06 1.3E-10 77.3 14.5 137 278-427 367-503 (618)
242 PRK15403 multidrug efflux syst 98.4 3.5E-06 7.7E-11 80.4 13.2 148 41-195 218-372 (413)
243 PRK10207 dipeptide/tripeptide 98.4 3.9E-06 8.4E-11 81.6 12.7 134 282-426 14-150 (489)
244 KOG3810 Micronutrient transpor 98.4 4.1E-06 9E-11 74.0 10.9 312 93-429 53-372 (433)
245 PF12832 MFS_1_like: MFS_1 lik 98.4 1.3E-06 2.9E-11 60.7 6.1 70 46-121 5-74 (77)
246 KOG0254 Predicted transporter 98.3 2E-05 4.3E-10 77.5 16.1 136 43-185 297-446 (513)
247 TIGR00806 rfc RFC reduced fola 98.3 2.5E-05 5.5E-10 73.4 15.1 102 318-427 56-158 (511)
248 PTZ00207 hypothetical protein; 98.3 8.6E-06 1.9E-10 79.8 12.3 183 41-233 353-548 (591)
249 KOG1330 Sugar transporter/spin 98.3 3.5E-06 7.5E-11 77.7 8.3 103 318-427 63-165 (493)
250 PF13000 Acatn: Acetyl-coenzym 98.2 0.00021 4.4E-09 67.0 18.7 365 44-427 3-449 (544)
251 KOG2533 Permease of the major 98.2 3.2E-06 6.9E-11 81.1 7.2 140 42-187 274-421 (495)
252 PF06609 TRI12: Fungal trichot 98.1 2.7E-05 5.8E-10 76.0 11.1 195 41-242 310-559 (599)
253 PF03219 TLC: TLC ATP/ADP tran 98.0 0.00051 1.1E-08 66.0 18.6 259 84-362 60-357 (491)
254 KOG2816 Predicted transporter 98.0 4.7E-05 1E-09 72.6 10.7 124 66-195 267-391 (463)
255 KOG1237 H+/oligopeptide sympor 97.9 0.013 2.8E-07 57.7 26.6 158 40-210 36-227 (571)
256 COG3202 ATP/ADP translocase [E 97.9 0.0041 8.9E-08 58.4 21.4 300 40-367 26-365 (509)
257 TIGR00880 2_A_01_02 Multidrug 97.9 3.5E-05 7.5E-10 60.9 7.0 90 331-427 6-95 (141)
258 KOG0255 Synaptic vesicle trans 97.9 0.0008 1.7E-08 66.4 17.0 141 87-244 355-500 (521)
259 COG3104 PTR2 Dipeptide/tripept 97.8 0.00022 4.7E-09 67.0 11.7 133 277-416 15-150 (498)
260 PF12832 MFS_1_like: MFS_1 lik 97.7 0.00036 7.7E-09 48.6 8.7 70 287-363 5-74 (77)
261 PF00854 PTR2: POT family; In 97.7 0.0017 3.6E-08 61.1 15.7 107 113-235 2-121 (372)
262 TIGR00805 oat sodium-independe 97.7 6.2E-05 1.3E-09 75.5 5.7 114 314-428 59-217 (633)
263 KOG2615 Permease of the major 97.6 0.00086 1.9E-08 60.7 11.6 121 69-195 290-413 (451)
264 TIGR00939 2a57 Equilibrative N 97.3 0.031 6.7E-07 53.4 18.5 37 387-423 376-412 (437)
265 KOG2563 Permease of the major 97.3 0.00047 1E-08 63.8 5.6 149 41-195 266-420 (480)
266 PF05978 UNC-93: Ion channel r 97.1 0.023 5E-07 45.6 13.4 91 329-427 43-133 (156)
267 KOG1479 Nucleoside transporter 97.1 0.12 2.7E-06 47.9 19.0 34 386-419 346-379 (406)
268 PF02487 CLN3: CLN3 protein; 97.0 0.015 3.3E-07 54.2 13.0 107 84-194 283-395 (402)
269 KOG3097 Predicted membrane pro 97.0 0.23 4.9E-06 44.5 19.0 72 92-164 68-140 (390)
270 PF06813 Nodulin-like: Nodulin 97.0 0.004 8.6E-08 54.3 8.3 104 317-423 31-135 (250)
271 PF03092 BT1: BT1 family; Int 96.9 0.0017 3.7E-08 62.2 6.3 150 84-242 257-418 (433)
272 PRK03612 spermidine synthase; 96.8 0.056 1.2E-06 53.0 15.9 122 66-195 40-170 (521)
273 PF06963 FPN1: Ferroportin1 (F 96.7 0.019 4.1E-07 54.4 11.3 130 60-195 277-417 (432)
274 KOG3880 Predicted small molecu 96.7 0.041 9E-07 48.6 11.8 174 43-235 14-197 (409)
275 PF07672 MFS_Mycoplasma: Mycop 96.6 0.067 1.4E-06 46.3 12.5 106 166-295 2-107 (267)
276 KOG3098 Uncharacterized conser 96.6 0.038 8.3E-07 52.5 12.1 146 41-192 240-410 (461)
277 PF05631 DUF791: Protein of un 96.5 0.093 2E-06 47.8 13.7 83 318-408 64-146 (354)
278 PF06779 DUF1228: Protein of u 95.9 0.091 2E-06 37.0 8.3 73 297-376 7-79 (85)
279 KOG2325 Predicted transporter/ 95.8 0.015 3.3E-07 55.4 5.3 157 37-195 258-449 (488)
280 TIGR00939 2a57 Equilibrative N 95.7 0.12 2.6E-06 49.5 10.9 109 84-193 309-431 (437)
281 KOG2601 Iron transporter [Inor 95.4 0.16 3.5E-06 46.2 9.8 77 41-122 27-103 (503)
282 PF03137 OATP: Organic Anion T 95.3 0.0045 9.7E-08 60.8 0.0 148 42-195 306-513 (539)
283 PF01770 Folate_carrier: Reduc 95.1 0.59 1.3E-05 43.9 13.0 98 79-176 282-382 (412)
284 KOG4830 Predicted sugar transp 94.6 0.01 2.2E-07 50.8 0.3 64 272-340 191-254 (412)
285 TIGR00926 2A1704 Peptide:H+ sy 94.5 0.21 4.5E-06 50.4 9.1 112 300-417 5-119 (654)
286 PF01733 Nucleoside_tran: Nucl 94.0 0.018 3.9E-07 52.5 0.4 107 86-192 186-306 (309)
287 COG0477 ProP Permeases of the 92.6 2.5 5.4E-05 37.6 12.4 99 323-426 39-138 (338)
288 KOG0637 Sucrose transporter an 91.6 0.48 1E-05 44.6 6.1 133 287-426 37-186 (498)
289 KOG1479 Nucleoside transporter 90.3 4.8 0.0001 37.7 11.4 109 82-192 282-401 (406)
290 PF01733 Nucleoside_tran: Nucl 89.0 0.15 3.2E-06 46.5 0.6 38 386-423 251-288 (309)
291 TIGR00769 AAA ADP/ATP carrier 88.8 21 0.00046 34.7 14.9 102 321-425 41-171 (472)
292 PF07672 MFS_Mycoplasma: Mycop 88.1 6.7 0.00015 34.3 9.9 103 84-186 143-255 (267)
293 KOG3880 Predicted small molecu 82.6 6.9 0.00015 35.2 7.5 75 119-193 326-401 (409)
294 PRK03612 spermidine synthase; 82.3 55 0.0012 32.4 15.2 56 289-350 21-76 (521)
295 KOG4332 Predicted sugar transp 79.4 33 0.00072 30.4 10.4 98 84-181 284-391 (454)
296 PRK11469 hypothetical protein; 78.1 39 0.00084 28.2 14.6 51 319-369 130-180 (188)
297 PF07857 DUF1632: CEO family ( 77.0 48 0.001 29.1 10.9 19 220-238 119-137 (254)
298 PF13000 Acatn: Acetyl-coenzym 70.5 39 0.00085 32.9 9.4 54 142-195 412-466 (544)
299 KOG3626 Organic anion transpor 69.7 6.4 0.00014 40.0 4.3 76 43-124 394-473 (735)
300 KOG3810 Micronutrient transpor 67.3 51 0.0011 30.5 8.9 112 81-195 270-384 (433)
301 KOG1237 H+/oligopeptide sympor 65.9 77 0.0017 31.8 10.9 112 296-413 51-182 (571)
302 PTZ00101 rhomboid-1 protease; 61.7 94 0.002 27.8 9.6 37 93-129 119-156 (278)
303 KOG3574 Acetyl-CoA transporter 59.1 30 0.00066 32.4 6.1 54 142-195 376-430 (510)
304 PF07760 DUF1616: Protein of u 55.1 1.6E+02 0.0035 26.5 12.0 57 138-194 22-78 (287)
305 COG2233 UraA Xanthine/uracil p 55.0 63 0.0014 31.0 7.8 80 37-124 12-91 (451)
306 COG5336 Uncharacterized protei 54.1 43 0.00093 24.7 5.0 31 86-116 46-77 (116)
307 TIGR00267 conserved hypothetic 52.0 49 0.0011 27.0 5.8 31 95-125 126-156 (169)
308 PF11947 DUF3464: Protein of u 50.2 47 0.001 26.5 5.2 50 134-185 96-145 (153)
309 PF06912 DUF1275: Protein of u 47.0 1.8E+02 0.0038 24.6 13.4 25 171-195 163-187 (209)
310 PF11947 DUF3464: Protein of u 46.7 1.1E+02 0.0023 24.5 6.7 43 382-427 96-138 (153)
311 COG1268 BioY Uncharacterized c 46.3 79 0.0017 26.2 6.2 24 88-111 88-111 (184)
312 PRK09664 tryptophan permease T 45.4 2.8E+02 0.0061 26.5 14.5 41 384-424 195-235 (415)
313 PF02694 UPF0060: Uncharacteri 43.6 55 0.0012 24.1 4.3 48 84-131 56-103 (107)
314 PF02632 BioY: BioY family; I 41.1 1.2E+02 0.0026 24.2 6.3 26 88-113 59-84 (148)
315 PRK02237 hypothetical protein; 40.5 1.3E+02 0.0029 22.3 5.8 48 84-131 58-105 (109)
316 KOG2881 Predicted membrane pro 40.5 1.4E+02 0.0031 26.1 6.9 24 343-366 259-282 (294)
317 TIGR02230 ATPase_gene1 F0F1-AT 39.5 1.5E+02 0.0032 21.8 6.0 19 342-360 61-79 (100)
318 PF09527 ATPase_gene1: Putativ 39.3 99 0.0021 19.5 5.5 35 89-123 7-42 (55)
319 COG1971 Predicted membrane pro 39.1 2.3E+02 0.0049 23.6 16.4 27 342-368 155-181 (190)
320 PF00854 PTR2: POT family; In 37.8 1.5E+02 0.0032 27.7 7.7 85 47-132 37-122 (372)
321 COG3559 TnrB3 Putative exporte 37.0 3.8E+02 0.0083 25.6 21.0 23 319-341 340-362 (536)
322 PF02990 EMP70: Endomembrane p 36.3 4.4E+02 0.0096 26.2 11.1 24 329-353 303-326 (521)
323 PF11299 DUF3100: Protein of u 36.1 33 0.00071 29.4 2.5 50 143-193 179-229 (241)
324 PF06341 DUF1056: Protein of u 34.6 96 0.0021 20.4 3.9 36 134-169 27-62 (63)
325 PF07857 DUF1632: CEO family ( 32.7 1.5E+02 0.0032 26.1 6.1 11 41-51 180-190 (254)
326 TIGR02840 spore_YtaF putative 32.1 3.2E+02 0.0068 23.2 15.8 32 319-350 153-184 (206)
327 TIGR02230 ATPase_gene1 F0F1-AT 31.6 2.1E+02 0.0046 21.0 5.8 30 95-124 55-85 (100)
328 TIGR00801 ncs2 uracil-xanthine 31.1 3.1E+02 0.0067 26.2 8.6 97 69-173 31-133 (415)
329 PF11085 YqhR: Conserved membr 31.0 2.9E+02 0.0064 22.5 10.5 64 305-371 50-116 (173)
330 PF10785 NADH-u_ox-rdase: NADH 29.2 2.1E+02 0.0046 20.3 5.5 41 95-135 31-78 (86)
331 COG4769 Predicted membrane pro 28.2 97 0.0021 25.0 3.8 53 89-147 80-132 (181)
332 TIGR03644 marine_trans_1 proba 26.3 5.2E+02 0.011 24.7 9.0 29 161-189 315-343 (404)
333 PF11151 DUF2929: Protein of u 26.1 1.9E+02 0.0041 18.7 5.9 46 178-239 10-55 (57)
334 COG2119 Predicted membrane pro 26.0 3.9E+02 0.0083 22.2 9.1 38 90-127 142-179 (190)
335 PF09605 Trep_Strep: Hypotheti 24.9 3.9E+02 0.0084 22.2 7.1 40 91-130 37-76 (186)
336 PF03219 TLC: TLC ATP/ADP tran 24.5 6.9E+02 0.015 24.6 15.7 51 145-195 292-344 (491)
337 PF11283 DUF3084: Protein of u 24.2 1.6E+02 0.0034 20.4 3.7 28 330-359 8-35 (79)
338 PRK13629 threonine/serine tran 23.6 6.8E+02 0.015 24.3 14.2 30 163-192 17-46 (443)
339 PRK11469 hypothetical protein; 23.6 3.2E+02 0.007 22.7 6.4 76 39-127 104-180 (188)
340 PF04281 Tom22: Mitochondrial 23.6 2.8E+02 0.0061 21.7 5.5 27 158-184 59-85 (137)
341 KOG3097 Predicted membrane pro 23.1 3.3E+02 0.0071 25.3 6.6 25 343-367 77-101 (390)
342 PF11298 DUF3099: Protein of u 21.8 1.8E+02 0.0039 19.9 3.7 31 105-135 10-40 (73)
343 COG3619 Predicted membrane pro 20.9 5.5E+02 0.012 22.2 15.6 28 84-111 57-84 (226)
344 TIGR00367 K+-dependent Na+/Ca+ 20.4 4.9E+02 0.011 23.7 7.5 36 42-77 171-206 (307)
No 1
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=1e-32 Score=268.12 Aligned_cols=358 Identities=13% Similarity=0.055 Sum_probs=274.4
Q ss_pred chhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHH
Q 013991 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (432)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (432)
+..+..+.+..++..++..+++..+|.+.+++|.+.++ .+|+.+.|.++..++.+++|+++||+|||++++++.
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~------~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~ 78 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNE------LLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGG 78 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhH------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 34566788899999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-Hhhhhhhc-ccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccC
Q 013991 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIF-REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (432)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 197 (432)
+++.++++++++++|++.++++|+++|++.+...+. ...+.+.+ |+++|++++++......+|..+||.+++++.+
T Consensus 79 ~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~-- 156 (495)
T PRK14995 79 TLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLE-- 156 (495)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--
Confidence 999999999999999999999999999998887775 67776665 78999999999999999999999999999998
Q ss_pred CcCCCcccccccccCccchHHHHHHHHHHHHH-HHHHhhcccccCCCCCCCcchhhhH---------HHhhhhhh-----
Q 013991 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSY---------DALESASA----- 262 (432)
Q Consensus 198 ~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~---------~~~~~~~~----- 262 (432)
.+|||+. +++.....++. ++..+.+||++++++++.+...... ...++..+
T Consensus 157 -----~~gwr~~---------f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~ 222 (495)
T PRK14995 157 -----HFYWGSV---------FLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSL 222 (495)
T ss_pred -----cCChHHH---------HHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCch
Confidence 4555544 46555444443 3444567775543222211111000 00000000
Q ss_pred -----------------hhhhhhccCCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchh
Q 013991 263 -----------------EVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMV 325 (432)
Q Consensus 263 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~ 325 (432)
...|.+.+.+....+++|++.+....+..++......+...++|.|++.. +|+++.++
T Consensus 223 ~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v-----~g~s~~~a 297 (495)
T PRK14995 223 WVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFV-----HGLSPLEA 297 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHH
Confidence 01122333445556789999888877777777777777777889888876 69999999
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHH
Q 013991 326 GEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLF 405 (432)
Q Consensus 326 g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (432)
|..+.+..++..++. ++.+++.||+++|+.+..+..+..++..++.......+ .+ .......+.+++.+...+...
T Consensus 298 g~~~~~~~~~~~~~~-~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~--~~-~~~~~~~l~G~g~g~~~~~~~ 373 (495)
T PRK14995 298 GMFMLPVMVASGFSG-PIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQ--QW-QAWGLMALLGFSAASALLAST 373 (495)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCc--hH-HHHHHHHHHHHhHHHHHHHHH
Confidence 999999999999988 68999999999999888887777666655543322121 11 223445566677777777888
Q ss_pred HHHhccccccchhhhhhHHHHHh
Q 013991 406 ILQNRAVVRVLTYTLSCHFWFVK 428 (432)
Q Consensus 406 ~~~~~~~p~~~~g~~~~~~~~~~ 428 (432)
....+.+|+++++.+++.+++.+
T Consensus 374 ~~~~~~~~~~~~g~~~~~~~~~~ 396 (495)
T PRK14995 374 SAIMAAAPPEKAAAAGAIETMAY 396 (495)
T ss_pred HHHHhcCCHHhcchHHHHHHHHH
Confidence 88888999999999999988876
No 2
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.1e-33 Score=249.88 Aligned_cols=288 Identities=20% Similarity=0.216 Sum_probs=245.3
Q ss_pred CCCchhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHH
Q 013991 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (432)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~ 116 (432)
+..+..++.+.++.|............+|++.+|+|+|..+ .|+..+.|.++..+++|+...++||+.||++++
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~------aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl 82 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGA------AGQLITAYALGVALGAPLLALLTGRLERRRLLL 82 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHcccchHHHHH
Confidence 45567788899999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 117 MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
..+.++.++++++++++||+.++++|++.|+..|.+.+. .++.+++.|+++|++++++...+.+++.++|.++|.++.+
T Consensus 83 ~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~ 162 (394)
T COG2814 83 GLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQ 162 (394)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 999999999999999999999999999999999998886 9999999999999999999999999999999999999999
Q ss_pred cCCcCCCcccccccccCccchHHHHHHHHHHHHHHH-HHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCC
Q 013991 196 PAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP 274 (432)
Q Consensus 196 ~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (432)
.+ +||.+|.+.+.++++.++ .+..+| |+...++.+ .+...
T Consensus 163 -------~~---------GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~~~~~---------------------~~~~~ 203 (394)
T COG2814 163 -------LF---------GWRATFLAIAVLALLALLLLWKLLP--PSEISGSLP---------------------GPLRT 203 (394)
T ss_pred -------Hh---------hHHHHHHHHHHHHHHHHHHHHHhCC--CccCCCCCC---------------------cchhH
Confidence 44 455555788777777544 456678 221111110 01123
Q ss_pred ccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChh
Q 013991 275 KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (432)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 354 (432)
..+.+|+|.++...+...+.....+...+++..++++. .|++.+..++.+..+++++++++ .+++++.|| +.+
T Consensus 204 ~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v-----~g~s~~~vs~~Ll~~Gv~~~~Gn-~~gGrl~dr-~~~ 276 (394)
T COG2814 204 LLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESV-----AGFSVSAVSLVLLAFGIAGFIGN-LLGGRLADR-GPR 276 (394)
T ss_pred HHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHc-----cCCCHhHHHHHHHHHHHHHHHHH-HHHhhhccc-cch
Confidence 45678999999998888888887777777877787776 69999999999999999999999 599999999 888
Q ss_pred HHHHHHHHHHHHHHHHhhHHHh
Q 013991 355 MVARIAGVLTIPLLTSYPYIAM 376 (432)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~ 376 (432)
+.+.....+..+.++.+.+...
T Consensus 277 ~~l~~~~~l~a~~~l~l~~~~~ 298 (394)
T COG2814 277 RALIAALLLLALALLALTFTGA 298 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHhcc
Confidence 8888777777776666655543
No 3
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=1.1e-31 Score=256.84 Aligned_cols=344 Identities=13% Similarity=0.066 Sum_probs=234.2
Q ss_pred hHHHHHHHHHHhhccccchhhhHHHHHHHhcCC---ccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHH
Q 013991 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIA---KREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (432)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s---~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~ 118 (432)
.+...+++.+++.++...+....|.+.++++.+ ..+ ....+...+...++..++++++|+++||+|||+++.++
T Consensus 23 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~ 99 (432)
T PRK10406 23 AIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQ---LLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLIS 99 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 344566778899999999999999999998643 322 00123344455566669999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhHH--------HHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHH
Q 013991 119 TASVVIFNTLFGLSVNFW--------MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPAL 189 (432)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~--------~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 189 (432)
.++++++++++++++++. .+++.|+++|++.|...+. .++++|++|+++|++..+..+.+...|..+++.+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~ 179 (432)
T PRK10406 100 VCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLV 179 (432)
T ss_pred HHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988764 6899999999998887775 9999999999999999999988888888888877
Q ss_pred HhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhc
Q 013991 190 GGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEG 269 (432)
Q Consensus 190 ~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (432)
...+.....+ .....++||.+|.+.+++.++.++....+||++++++++ +
T Consensus 180 ~~~~~~~~~~--------~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~~---------------------~- 229 (432)
T PRK10406 180 VVVLQQTLED--------AELREWGWRIPFALGAVLAVVALWLRRQLDETSQQETRA---------------------L- 229 (432)
T ss_pred HHHHHHhCCH--------HHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHHHhh---------------------h-
Confidence 6655431000 000145677777887777666554444566654321100 0
Q ss_pred cCCCCccccccchhHHHHHHHHHHH-HHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHH
Q 013991 270 REATPKKSLLKNWPLMSSIIVYCVF-SLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLE 348 (432)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~ 348 (432)
++..+.++++|+++.+...+...+. ......+..++|.|+.+. +|++..+.+.......+...+++ .+.+++.
T Consensus 230 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~-----~g~s~~~~~~~~~i~~~~~~i~~-~~~G~l~ 303 (432)
T PRK10406 230 KEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNT-----AGMHANVASGIMTAALFVFMLIQ-PLIGALS 303 (432)
T ss_pred cccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 0112456677888776655544432 455666777888888665 68888888888888788877777 4779999
Q ss_pred HHhChhHHHHHHHHHHHHHHHHhhH-HHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 349 RILGPIMVARIAGVLTIPLLTSYPY-IAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
||++||+...++.++..+....+.. ...... . +. ......+..+..+...+....+.+|.+|++.|+++.|+.+.+
T Consensus 304 Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~-~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~ 380 (432)
T PRK10406 304 DKIGRRTSMLCFGSLAALFTVPILSALQNVSS-P-YA-AFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAV 380 (432)
T ss_pred HHcCchHHHHHHHHHHHHHHHHHHHHHHcCCc-H-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHH
Confidence 9999998876665543332221111 111111 1 11 111111111122223345667889999999999999998754
No 4
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=5.3e-32 Score=251.89 Aligned_cols=316 Identities=14% Similarity=0.054 Sum_probs=224.7
Q ss_pred hccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhh
Q 013991 54 ALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV 133 (432)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 133 (432)
......+.+.+|.+.+|+|.|+.+ .|++.+.+.+++.+++++.|+++||+|||+++..+......+......++
T Consensus 4 ~~~~~~~~~~lp~i~~~~~~s~~~------~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~ 77 (368)
T TIGR00903 4 QAIWVTFSPVLSLVAEDIDVSKEE------LGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPF 77 (368)
T ss_pred hHHHHHHHhhHHHHHHHhCcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhc
Confidence 344566789999999999999999 99999999999999999999999999999987766555555443333347
Q ss_pred hHHHHHHHHHHHhhhccchhhHHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCc
Q 013991 134 NFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKF 213 (432)
Q Consensus 134 ~~~~l~~~r~~~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~ 213 (432)
+++.+++.|+++|++.+...+....++|++|+++|++++++.+.+..+|.++++.+++++.+ .+|
T Consensus 78 ~~~~l~~~R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~-------~~g-------- 142 (368)
T TIGR00903 78 NYEWLLACQLLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYT-------AGG-------- 142 (368)
T ss_pred cHHHHHHHHHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------ccc--------
Confidence 99999999999999988765566777999999999999999999999999999999999987 344
Q ss_pred cchHHHHHHHHHHHH-HHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHH
Q 013991 214 PYFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYC 292 (432)
Q Consensus 214 ~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (432)
||..+++.+++.++ .++..+.+||+|++++++.+ . + + . .+..++++|+|.++...+.++
T Consensus 143 -Wr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~~~~~----~-~-------~---~----~~~~~~ll~~~~~~~~~~~~~ 202 (368)
T TIGR00903 143 -LQLLIIPIAAVAAAGIILVLAALPALPFQAAEGFG----F-K-------D---A----VKEFGALAGRKDLWIIGAILG 202 (368)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcc----h-H-------H---H----HHHHHHHHcChhHHHHHHHHH
Confidence 55555776665554 44456678987754321110 0 0 0 0 012467889999999999999
Q ss_pred HHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhCh---hHH-HHHHHHHHHHHH
Q 013991 293 VFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP---IMV-ARIAGVLTIPLL 368 (432)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~-~~~~~~~~~~~~ 368 (432)
+......++.++.|.|+.+. |++.. .+.......+.+.++. +++.||.+| |+. ......+..+.+
T Consensus 203 ~~~~~~~~~~~wlp~~L~~~------g~s~~-~~~~~~l~~~~g~~g~----~~~~d~~~r~~~r~~~~~~~~~~~a~~~ 271 (368)
T TIGR00903 203 FGVALFDNLAIWLEAALRPA------GLEDI-AGDAVALAILAGLIGV----AVIPDRVARAGLRSIYIRAAALLIAAFF 271 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHC------CCChH-HHHHHHHHHHHHHHHH----HHhhHHhhhhhhHHHHHHHHHHHHHHHH
Confidence 98988999999999999652 55643 5666666555555554 455555543 232 222333333333
Q ss_pred HHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 369 TSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
..++..... + .......+.+++....++..+++.+|..|++.||++.|..+..
T Consensus 272 ~~~~~~~~~-----~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~ 324 (368)
T TIGR00903 272 LALAFELNR-----L-ALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFT 324 (368)
T ss_pred HHHHHcccc-----H-HHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHH
Confidence 332222111 1 1222333344455666677888999999999999999998863
No 5
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=1.2e-31 Score=254.75 Aligned_cols=363 Identities=12% Similarity=0.018 Sum_probs=252.6
Q ss_pred CCchhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHH
Q 013991 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (432)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~ 117 (432)
.+|+.+..+++..++++++........|.+.+|+|.+..+ .|++.+++.+++.+++++.|+++||+|||+++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~ 78 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATM------FGLAATLFYAAYVICGIPSNIMLAIIGARRWIAG 78 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHH------HHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHH
Confidence 3556677888888999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhccc
Q 013991 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (432)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (432)
+.++..++.+++++++|++++++.|++.|++.+...+. ..++.|++|+++|++++++++.+.++|.++++.+++++.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~ 158 (412)
T TIGR02332 79 IMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILAL 158 (412)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999998888776 78899999999999999999999999999999999988641
Q ss_pred CCcCCCcccccccccCccchHHHHHHHHHHHH-HHHHHhhcccccCCCCCCCcc-hhhhHHHhhhhhhh---hhhhhccC
Q 013991 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDS-CDVSYDALESASAE---VKEEEGRE 271 (432)
Q Consensus 197 ~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~ 271 (432)
.+ ..+ .++||..+.+.++..++ .++..+++||+|++.+.-.++ ++...+..+....+ .++..+++
T Consensus 159 ~~-~~~---------~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (412)
T TIGR02332 159 DG-LMA---------LKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHA 228 (412)
T ss_pred CC-CCC---------ccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccc
Confidence 10 001 23455555776666654 344556778887543211111 11110111100000 00000000
Q ss_pred C----CCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHH
Q 013991 272 A----TPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFL 347 (432)
Q Consensus 272 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l 347 (432)
+ ..++.++ ++.++...+.+++.......+..++|.|+++. +.+++..+++.......++..++. ++.+++
T Consensus 229 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~----~~~~s~~~~~~~~~~~~l~~~~g~-l~~g~l 302 (412)
T TIGR02332 229 AMPQRSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSF----NQGSSNIMIGLLAAIPQFCTIFGM-IWWSRH 302 (412)
T ss_pred cccHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCCcHHHhHHHhhHHHHHHHHHH-HHHHHH
Confidence 0 1123333 46777777777777777778888999998762 146678888999999999999988 599999
Q ss_pred HHHhChhHH-HHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHH
Q 013991 348 ERILGPIMV-ARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWF 426 (432)
Q Consensus 348 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~ 426 (432)
+||+++|+. .........+.+.+. ... .... . ......+..++.....+.......+..|+++|+++.|..+.
T Consensus 303 ~dr~~~r~~~~~~~~~~~~~~~~~~-~~~--~~~~--~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~ 376 (412)
T TIGR02332 303 SDRLKERKHHTALPYLFAAAGWLLA-SAT--DHNL--I-QLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINA 376 (412)
T ss_pred hcccCccHHHHHHHHHHHHHHHHHH-Hhc--CCHH--H-HHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHH
Confidence 999987664 333333333332221 111 1111 1 11111111122222233444555677899999999998886
Q ss_pred Hh
Q 013991 427 VK 428 (432)
Q Consensus 427 ~~ 428 (432)
..
T Consensus 377 ~~ 378 (412)
T TIGR02332 377 TG 378 (412)
T ss_pred hh
Confidence 54
No 6
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=100.00 E-value=5.9e-33 Score=242.53 Aligned_cols=350 Identities=37% Similarity=0.559 Sum_probs=252.7
Q ss_pred ccchhhhHHHHHHHhcCCccccc--hhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhh
Q 013991 57 ISSLFPFLYFMIKDFQIAKREED--IGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN 134 (432)
Q Consensus 57 ~~~~~~~~~~~~~~~~~s~~~~~--~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~ 134 (432)
.....+......++|+.-..+.+ ...+.|.+.+.+++.+.+.++.+|.++||+|||++++++++..++...+.+.+.|
T Consensus 41 ~~~L~~~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~ 120 (451)
T KOG2615|consen 41 VSSLYPFVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRN 120 (451)
T ss_pred ccchhHHHHHhhHHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555566677776555544 6788999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccchhhHHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCcc
Q 013991 135 FWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 214 (432)
Q Consensus 135 ~~~l~~~r~~~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~ 214 (432)
+..++++|++.|+..|...+..++++|++++|+|+++++.++.++++|.++||.+||++.+.. ..++++.
T Consensus 121 F~afv~aR~l~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~----------~~~g~~p 190 (451)
T KOG2615|consen 121 FAAFVLARFLGGIFKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFS----------SISGSYP 190 (451)
T ss_pred HHHHHHHHHhhhhccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhH----------hhhccCc
Confidence 977777799999999999999999999999999999999999999999999999999998711 1122445
Q ss_pred chHHHHHHHHHHHH-HHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHH
Q 013991 215 YFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCV 293 (432)
Q Consensus 215 ~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (432)
+..|.++..+.... .....+++||+-+.+++. ++.....+..++. .+..+.+.......+||++....+..+..
T Consensus 191 ~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~~-~~~~~~~~~~~~~----~~~~~~~~~~~v~~lrn~p~~~~i~~~~i 265 (451)
T KOG2615|consen 191 FALPCLLVFILAAGDVTFFPWFLPETLPLRKRN-DEHSTLQEAADDR----LALLKFARIFKVAALRNPPLLDFISVLRI 265 (451)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCccccchhhc-ccccchhhhhhhh----hhhcchhhhhhhhhhcCccccchHHHHHH
Confidence 55555555555554 455668899997665544 1111111111111 11111111222345566665555555555
Q ss_pred HHHHhhhHHHHHHhhhcCCCcC--CCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhC-hhHHHHHHHHHHHHHHHH
Q 013991 294 FSLHDMAYSEIFSLWANSPKKL--GGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG-PIMVARIAGVLTIPLLTS 370 (432)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~--~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~ 370 (432)
+......+..+++.+....... +++|+++.+.|.+++..++.+.+.+..+.+++.+..+ .+-.+..+..++...+++
T Consensus 266 ~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~ll 345 (451)
T KOG2615|consen 266 FGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLL 345 (451)
T ss_pred HHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHH
Confidence 5555566666666555444333 5699999999999999999999888655554433332 223334444444444555
Q ss_pred hhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 371 YPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
+...... ..++++..+..+..+...++.+.++++..|.++||+++|++..+
T Consensus 346 ls~~~~~------~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl 396 (451)
T KOG2615|consen 346 LSLARTP------VVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSL 396 (451)
T ss_pred Hhccccc------hhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHH
Confidence 4444332 36778888888899999999999999999999999999998765
No 7
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=1.3e-31 Score=261.06 Aligned_cols=357 Identities=14% Similarity=0.154 Sum_probs=269.9
Q ss_pred hHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHH
Q 013991 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (432)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 121 (432)
.+..+.+..++..++.....+..|.+.+++|.+.++ .+++.+.+.++..++.++.|+++||+|||++++++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 76 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQ------VQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFA 76 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhh------hhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHH
Confidence 345667788888889999999999999999999998 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcC
Q 013991 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (432)
Q Consensus 122 ~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 200 (432)
..++.++++.+++++.+++.|+++|++.+...+. .+++.|++|+++|++++++.+....+|..+||.+++++.+
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~----- 151 (485)
T TIGR00711 77 FTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIE----- 151 (485)
T ss_pred HHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhcc-----
Confidence 9999999999999999999999999998888775 9999999999999999999999999999999999999987
Q ss_pred CCcccccccccCccchHHHHHHHHHHHHHH-HHHhhcccccCCCCCCCcchhhhH------------HHh-hhhhh----
Q 013991 201 PNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSY------------DAL-ESASA---- 262 (432)
Q Consensus 201 ~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~------------~~~-~~~~~---- 262 (432)
.+|||+.| .+.+...++.. +..+.+||+++..+++.+...... ++. ++...
T Consensus 152 --~~~w~~~f---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (485)
T TIGR00711 152 --NYHWRWIF---------LINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNE 220 (485)
T ss_pred --CcCceehh---------hhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchH
Confidence 55665554 55444444333 334456664432222111110000 000 00000
Q ss_pred ---------------hhhhhhccCCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhH
Q 013991 263 ---------------EVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGE 327 (432)
Q Consensus 263 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~ 327 (432)
..++.+.+++....+.+++++++...+..++..+.......++|.|+++. +|+++.+.+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~g~s~~~~g~ 295 (485)
T TIGR00711 221 ILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQV-----LGYTALQAGL 295 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHH
Confidence 00122223344445678899888887777777777777888889998876 6899999999
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHH
Q 013991 328 VLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFIL 407 (432)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (432)
......++..++. ++.+++.||+++|+.+..+..+..++..++.+...... ..........+.+++.+...+.....
T Consensus 296 ~~~~~~~~~~~~~-~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~g~g~~~~~~~~~~~ 372 (485)
T TIGR00711 296 HILPVGLAPMLSS-PIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDT--PFLAIALPQFIRGFGMGCFFMPLTTI 372 (485)
T ss_pred HHHHHHHHHHHHH-HHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888 58899999999999988888777776665542111111 11122333455566666666666777
Q ss_pred HhccccccchhhhhhHHHHHh
Q 013991 408 QNRAVVRVLTYTLSCHFWFVK 428 (432)
Q Consensus 408 ~~~~~p~~~~g~~~~~~~~~~ 428 (432)
..+..|++++|++++.+++.+
T Consensus 373 ~~~~~~~~~~g~~~~~~~~~~ 393 (485)
T TIGR00711 373 ALSGLPPHKIARGSSLSNFTR 393 (485)
T ss_pred HHhcCCHHHHhHHHHHHHHHH
Confidence 778899999999999998876
No 8
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=6.7e-32 Score=267.27 Aligned_cols=365 Identities=15% Similarity=0.120 Sum_probs=261.4
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHH
Q 013991 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (432)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 122 (432)
++.+.++.+..+++...+...+|.+.++++.+..+ .+++.+++.++.+++++++|+++||+|||+++++++++.
T Consensus 169 ~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~------~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~ 242 (742)
T TIGR01299 169 FFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSG------KGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVN 242 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 33555566666777778888999999999999988 999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCC
Q 013991 123 VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (432)
Q Consensus 123 ~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 201 (432)
+++.++++++++++.++++|++.|++.|...+. .+++.|++|+++|++.++++..+..+|.++++.++..+..
T Consensus 243 ~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~------ 316 (742)
T TIGR01299 243 GFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIP------ 316 (742)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 999999999999999999999999998887775 9999999999999999999999999999999999988876
Q ss_pred Cccccccc----ccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhH--HHhhhhh--------------
Q 013991 202 NLFSSESL----FGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSY--DALESAS-------------- 261 (432)
Q Consensus 202 ~~~gw~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~~~~~~-------------- 261 (432)
.+||+.. +...+||..+++.++..++.++..+++||+|++...+.+..+... .......
T Consensus 317 -~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~ 395 (742)
T TIGR01299 317 -HYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVN 395 (742)
T ss_pred -hccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHH
Confidence 5666532 224578988888888877777778889999987544332221110 0000000
Q ss_pred ---hhhhhh-----hccCC------------------CCccccccchhH---HHHHHHHHHHHHHhhhHHHHHHhhhcCC
Q 013991 262 ---AEVKEE-----EGREA------------------TPKKSLLKNWPL---MSSIIVYCVFSLHDMAYSEIFSLWANSP 312 (432)
Q Consensus 262 ---~~~~~~-----~~~~~------------------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (432)
....+. +++.. ..++.+++.+.. +...+.++...+.+.++..++|..+...
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~ 475 (742)
T TIGR01299 396 HIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHL 475 (742)
T ss_pred HHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 00000 012334444332 3445556666677788888888653210
Q ss_pred ---C-------------c--------------CCCc------cc------------------------------------
Q 013991 313 ---K-------------K--------------LGGL------NY------------------------------------ 320 (432)
Q Consensus 313 ---~-------------~--------------~~~~------g~------------------------------------ 320 (432)
. . .+++ |+
T Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~ 555 (742)
T TIGR01299 476 QADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTL 555 (742)
T ss_pred HHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhh
Confidence 0 0 0000 00
Q ss_pred -------------------------------------ccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHH
Q 013991 321 -------------------------------------STQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 363 (432)
Q Consensus 321 -------------------------------------s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 363 (432)
+.........+.+++.+++. ++.+++.||+|||+++.++.++
T Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~-il~g~L~Dr~GRr~~l~~~~~l 634 (742)
T TIGR01299 556 FENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGN-IVSALLMDKIGRLRMLAGSMVL 634 (742)
T ss_pred ccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHH
Confidence 00112333555667777887 5999999999999999999888
Q ss_pred HHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 364 TIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
.+++++++++..... .+++..++.+++.....+....+++|.+|++.|+++.|+.+..
T Consensus 635 sai~~ll~~~~~s~~------~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~ 692 (742)
T TIGR01299 635 SCISCFFLSFGNSES------AMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNAL 692 (742)
T ss_pred HHHHHHHHHHHccHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 888877766543322 1223334445566667788999999999999999999887654
No 9
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=2.6e-31 Score=252.93 Aligned_cols=359 Identities=13% Similarity=0.123 Sum_probs=251.2
Q ss_pred CCCchhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHH
Q 013991 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (432)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~ 116 (432)
+.+++.+...++..+.+.++.....+..|.+.+++|.+..+ .+++.+.+.++..+++++.|+++||+|||++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~ 81 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVD------AASLISAALISRWFGALMFGLWGDRYGRRLPMV 81 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhh------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 34556677888999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 117 MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
++.++.+++.++++++++++.+++.|++.|++.+...+. .+++.|++|+++|+++.++.+.+..+|..+++.+++.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~ 161 (405)
T TIGR00891 82 TSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVP 161 (405)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998887775 9999999999999999999999999999999999999886
Q ss_pred cCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhc---cCC
Q 013991 196 PAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEG---REA 272 (432)
Q Consensus 196 ~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 272 (432)
..+ .+|+..+.+.++..++.++....+||+++++++++++++.. +..++...+....+. +..
T Consensus 162 -------~~~-------~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 226 (405)
T TIGR00891 162 -------VWG-------DGWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVR-TMVDILYGGEHRIANIVMTLA 226 (405)
T ss_pred -------hcC-------ccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhh-hHHHHHhccchhhhhhhhhhh
Confidence 222 12555556665555555555566777654322111110000 000000000000000 000
Q ss_pred CCccccc-cch-hHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHH
Q 013991 273 TPKKSLL-KNW-PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (432)
Q Consensus 273 ~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 350 (432)
...+... +++ .+...................++|.|+.+. +|++..+.+.+.+..+++..++. ++.+++.||
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~s~~~~~~~~~~~~~~~~~g~-~~~g~l~dr 300 (405)
T TIGR00891 227 AAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKAD-----LGLSPHTVANIVVFSNIGAIVGG-CVFGFLGDW 300 (405)
T ss_pred HHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH-----hCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 0001101 111 122222333333344445556677777654 68899999999999999999988 589999999
Q ss_pred hChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 351 LGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
+++|+.+..+.....+........ ... . ....+...+.+++.....+.....+.+..|+++|+++.|..+..
T Consensus 301 ~g~~~~~~~~~~~~~~~~~~~~~~--~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 372 (405)
T TIGR00891 301 LGRRKAYVCSLLAGQLLIIPVFAI--GAN--V-AVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQL 372 (405)
T ss_pred hCchhhhHHHHHHHHHHHHHHHHh--CCc--h-HHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHH
Confidence 999998877766543322221111 111 1 12222323334445555667778889999999999999987764
No 10
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-32 Score=244.11 Aligned_cols=349 Identities=17% Similarity=0.117 Sum_probs=273.4
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 120 (432)
+.++.+++++...++.+..+....|.+.++.+.|.+| .|++.+++.+.+.++..+.|.++||.+.|+.+.++++
T Consensus 29 qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~------lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLi 102 (448)
T COG2271 29 QIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQ------LGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLI 102 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHH
Confidence 3455778888888888999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhh-HHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHH--hhhcccC
Q 013991 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG--GFLAQPA 197 (432)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--~~l~~~~ 197 (432)
+.++.+++++++++.+.+.+..++.|..+|+-.| +...++.|++++|||+..++.+.+.++|..+.|++. +++..
T Consensus 103 lsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~-- 180 (448)
T COG2271 103 LSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAF-- 180 (448)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHh--
Confidence 9999999999999999999999999999999877 499999999999999999999999999999999999 78776
Q ss_pred CcCCCcccccccccCccchHHHHHHHHHHHH-HHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhcc-----C
Q 013991 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGR-----E 271 (432)
Q Consensus 198 ~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 271 (432)
+++ |+..|+.-++++++ .++.++..+++|+..--.+- ++...+..+.. ++++++ .
T Consensus 181 -----~~~---------w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~i-e~~~~d~~e~~----~~~~~~~~ls~~ 241 (448)
T COG2271 181 -----HGG---------WRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPI-EEYRGDPLEIY----EEEKENEGLTAW 241 (448)
T ss_pred -----ccc---------hhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCH-HHhhcCchhhh----hhhccCCCccHH
Confidence 334 44445777766665 55556677777765322111 11110111110 111111 1
Q ss_pred CCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHh
Q 013991 272 ATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL 351 (432)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 351 (432)
....+.+++||.+|.+.+.+.+.+.+-.+...+-|+|+.+. .|+|..+++...+.+-.+++++. ++.||++||+
T Consensus 242 ~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~-----k~~s~~~a~~a~~lfE~agl~G~-Ll~GwlSDkl 315 (448)
T COG2271 242 QIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEV-----KGFSLVKANWAISLFEVAGLPGT-LLAGWLSDKL 315 (448)
T ss_pred HHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh-----cCCCHHHHHHHHHHHHHHhhHHH-HHHHHHHHHh
Confidence 23456778999999999999999999999999999999987 79999999999999999999998 5999999996
Q ss_pred --ChhHHHHHH-HHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHH
Q 013991 352 --GPIMVARIA-GVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWF 426 (432)
Q Consensus 352 --~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~ 426 (432)
|||....+. ++...++++.+-..+.. .+.+..+..++.|++..+.....-....|.+|++..|+++|..-+
T Consensus 316 fkgrR~p~~~i~~~~i~~~~~~~w~~~~~----~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Gl 389 (448)
T COG2271 316 FKGRRGPMALIFMLLITASLVLYWLAPNG----SYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGL 389 (448)
T ss_pred cccccchHHHHHHHHHHHHHHHHHcCCCc----cHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhh
Confidence 455444433 33333333333222222 334555666667777777777777788999999999999987654
No 11
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=1.9e-31 Score=250.21 Aligned_cols=336 Identities=15% Similarity=0.072 Sum_probs=256.5
Q ss_pred HHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHH
Q 013991 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (432)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 125 (432)
+....++..++.....+.+|.+..+++.+..+ .+++.+++.++..+++++.|+++||+|||+++..+.++..++
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~ 77 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTGSASV------LSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVL 77 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccHHH------HHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHH
Confidence 45667777888888889999999999999988 999999999999999999999999999999999999999998
Q ss_pred HHHHhhhh-----hHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCc
Q 013991 126 NTLFGLSV-----NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (432)
Q Consensus 126 ~~~~~~~~-----~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 199 (432)
.++..+++ +++.+++.|++.|++.+...+. .+++.|++|+++|++.+++.+.+..+|.++||.+++.+.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~---- 153 (365)
T TIGR00900 78 VAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYA---- 153 (365)
T ss_pred HHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH----
Confidence 88888887 9999999999999998888876 9999999999999999999999999999999999999987
Q ss_pred CCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccc
Q 013991 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLL 279 (432)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (432)
.++|+..+.+.++..++..+..+.++++++.++++++.++.. .++.....+..+
T Consensus 154 ------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~ 207 (365)
T TIGR00900 154 ------------TLGIKWAIWVDAVGFAISALLIVSVRIPELAASEIQALSNAV--------------LRDTREGIKFVL 207 (365)
T ss_pred ------------HhhHHHHHHHHHHHHHHHHHHHHhcccccCCCccccccchhH--------------HHHHHhHHHHHH
Confidence 344555556665555444433333322111111111000000 000011345567
Q ss_pred cchhHHHHHHHHHHHHHHhhhHH-HHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHH
Q 013991 280 KNWPLMSSIIVYCVFSLHDMAYS-EIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (432)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 358 (432)
|+|.++......++......... .+.|.|..+. +|.++.+.+......+++..++. ++.+++.||.++++...
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~ 281 (365)
T TIGR00900 208 KNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKY-----LGRGSTHYGWVLAAFGLGALLGA-LLLGLLGRYFKRMALMT 281 (365)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-----hCCchHHHHHHHHHHHHHHHHHH-HHHHHHHHHhchhHHHH
Confidence 78888777776666666555554 6777777654 68889999999999999998887 57889999999999888
Q ss_pred HHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHHh
Q 013991 359 IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFVK 428 (432)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~~ 428 (432)
.+..+..+.+....+... + .....+..++.+++.+...+...++..+.+|+++|+++.+.++...
T Consensus 282 ~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 346 (365)
T TIGR00900 282 GAIFVIGLAILVVGLTPP-N----FPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLS 346 (365)
T ss_pred HHHHHHHHHHHHHHhhch-h----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 776666666555544332 1 2234455566677777788889999999999999999999988764
No 12
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=1.8e-31 Score=253.08 Aligned_cols=347 Identities=15% Similarity=0.105 Sum_probs=249.5
Q ss_pred HHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHh
Q 013991 51 LCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG 130 (432)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~ 130 (432)
++..++...+....|.+.+++|.+..+ .+++.+++.++..++.++.|+++||+|||+++.++.++.+++.++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~ 77 (399)
T TIGR00893 4 VINYLDRANLSFAAPMLQEDLGLSAAQ------YGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQA 77 (399)
T ss_pred hHHHHHHHhhhHhHHHHHHhhCCChhh------HHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHH
Confidence 345566677788889999999999999 99999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCccccccc
Q 013991 131 LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESL 209 (432)
Q Consensus 131 ~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~ 209 (432)
++++++.+++.|++.|++.+...+. .+++.|++|+++|++.+++.+...++|..++|.+++.+.+
T Consensus 78 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-------------- 143 (399)
T TIGR00893 78 FAGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILI-------------- 143 (399)
T ss_pred HHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH--------------
Confidence 9999999999999999998887776 9999999999999999999999999999999999999887
Q ss_pred ccCccchHHHHHHHHHHHHHHHH-HhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccchhHHHHH
Q 013991 210 FGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSI 288 (432)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (432)
..+|+..+.+.++..++..+. .+..||++++.+...++++....+....+.+.++++++.....++.+++++++...
T Consensus 144 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (399)
T TIGR00893 144 --HFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLA 221 (399)
T ss_pred --hCCchHHHHHHHHHHHHHHHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHH
Confidence 344555556666655554333 34556654432221111111000000000001111222334466788899998888
Q ss_pred HHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHH-HHHHHHHH
Q 013991 289 IVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARI-AGVLTIPL 367 (432)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~ 367 (432)
+..++..........+.|.|..+. +|.++.+.+.+.....+..+++. ++.+++.||+++|+.... ........
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~ 295 (399)
T TIGR00893 222 LGQFLVNIGLGFFLTWFPTYLVQE-----RGLSILEAGFMASLPGIVGFIGM-ILGGRLSDLLLRRGKSLVFARKTAIIA 295 (399)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHH-----hcccHHHhhHHHHHHHHHHHHHH-HHHHHHHHHHhhcccchhHHHHHHHHH
Confidence 888888888888888899888765 68889999999999999998888 588999999998851111 11111111
Q ss_pred ---HHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHHh
Q 013991 368 ---LTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFVK 428 (432)
Q Consensus 368 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~~ 428 (432)
............ .. . ........+.+..+..+....+..|..|+++|+++.+.+....
T Consensus 296 ~~~~~~~~~~~~~~~-~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 356 (399)
T TIGR00893 296 GLVLSLLMFATNYVN-IP-Y-AALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLG 356 (399)
T ss_pred HHHHHHHHHHhccch-hH-H-HHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHH
Confidence 111111111010 11 1 1222222233344478889999999999999999999887754
No 13
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=5.9e-31 Score=248.88 Aligned_cols=328 Identities=15% Similarity=0.113 Sum_probs=235.1
Q ss_pred chhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHH
Q 013991 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (432)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (432)
+..++.+.+..+..........+.+|.+.+++|.++.+ .|+..+.+.+++.+++++.|+++||+|||+++..+.
T Consensus 8 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 81 (390)
T PRK03545 8 WLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQ------VGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLF 81 (390)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 33445555555554444445666789999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCC
Q 013991 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (432)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (432)
++.+++++++++++|++.+++.|+++|++.+...+. .+++.|++|+++|++++++.+.+.++|..+||.+++.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~--- 158 (390)
T PRK03545 82 VLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQ--- 158 (390)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHH---
Confidence 999999999999999999999999999988887775 8999999999999999999999999999999999999987
Q ss_pred cCCCcccccccccCccchHHHHHHHHHHHHHHH-HHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccc
Q 013991 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKS 277 (432)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (432)
.+| |+..+.+.++..++..+ ....+||.+++++ + + .+..++
T Consensus 159 ----~~g---------w~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~---~--~--------------------~~~~~~ 200 (390)
T PRK03545 159 ----YLG---------WRTTFLAIGGGALITLLLLIKLLPLLPSEHS---G--S--------------------LKSLPL 200 (390)
T ss_pred ----Hhc---------HHHHHHHHHHHHHHHHHHHHHhCCCCCCCCc---c--h--------------------HHHHHH
Confidence 344 45555666665554433 3344565432110 0 0 012345
Q ss_pred cccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHH
Q 013991 278 LLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVA 357 (432)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 357 (432)
.+|++.++......++..........+.+.+..+. +|++..+.+.+....+++..+++ ++.+++.||.+++...
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~g~s~~~~~~~~~~~~~~~~~g~-~~~g~l~dr~~~~~~~ 274 (390)
T PRK03545 201 LFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQV-----AGLSENFATLLLLLFGGAGIIGS-VLFSRLGNRHPSGFLL 274 (390)
T ss_pred HHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCccHHHHHHHHHHHHHHHHH-HHHHHHhhccchhHHH
Confidence 67788776655554444444444445566666554 68899999999999999999998 5889999999877643
Q ss_pred HHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 358 RIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
.+..+..+....+.... .+ . ..+.+...+.+++.....+.....+.+..| +.++++.|.+...
T Consensus 275 -~~~~~~~~~~~~l~~~~--~~--~-~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~ 337 (390)
T PRK03545 275 -IAIALLLVCLLLLLPAA--NS--E-WHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGI 337 (390)
T ss_pred -HHHHHHHHHHHHHHHHh--ch--H-HHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHH
Confidence 44333333333222111 11 1 123334444455555555666777777766 5778888876654
No 14
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=5.1e-32 Score=261.75 Aligned_cols=354 Identities=13% Similarity=0.050 Sum_probs=244.5
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHH
Q 013991 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (432)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 122 (432)
+...++..++.+++...+.+..|.+.+++|.+..+ .|++.+++.+++.+++++.|+++||+|||+++.++.++.
T Consensus 31 ~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~ 104 (467)
T PRK09556 31 YLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTE------LGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILS 104 (467)
T ss_pred HHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHH
Confidence 33566677777888999999999999999999999 999999999999999999999999999999998888888
Q ss_pred HHHHHHHhh-----hhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhccc
Q 013991 123 VIFNTLFGL-----SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (432)
Q Consensus 123 ~~~~~~~~~-----~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (432)
+++.++.+. +++++.+++.|+++|++.+...+. .++++|++|+++|++++++.+.+.++|.++++.+..++.+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~- 183 (467)
T PRK09556 105 AICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGAN- 183 (467)
T ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHH-
Confidence 777766654 589999999999999998887775 8899999999999999999999999999999998877654
Q ss_pred CCcCCCcccccccccCccchHHHHHHHHHHHHH-HHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCC-C-
Q 013991 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREA-T- 273 (432)
Q Consensus 197 ~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 273 (432)
.+ + ..+|+..+.+.+++.++. ++..++.+++|++....++++... +...+.++ ..++++... .
T Consensus 184 ------~~-----~-~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~ 249 (467)
T PRK09556 184 ------YF-----F-DGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIFG-EPISEEDK-ETESTDMTKWQI 249 (467)
T ss_pred ------hh-----c-cCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhccc-Cccchhhh-ccccccCcHHHH
Confidence 11 0 112444445555544443 333444565543322111100000 00000000 000000000 0
Q ss_pred CccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhCh
Q 013991 274 PKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP 353 (432)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 353 (432)
..+..+|++.++...+..++......+...+.|.|+++. +|++..+++.......++.++++ ++.++++||+++
T Consensus 250 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~-----~g~s~~~a~~~~~~~~~~~~ig~-~~~G~lsDr~g~ 323 (467)
T PRK09556 250 FVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQE-----LGFSKEDAINTFTLFEIGALVGS-LLWGWLSDLANG 323 (467)
T ss_pred HHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCC
Confidence 112367899999888888887777777888999998775 78999999999998889988888 699999999998
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 354 IMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
|+..........+....+.... ..+ . ....+..++.+++..+..........|..|++.+|+++|+.+..
T Consensus 324 r~~~~~~~~~~~~~~~~~~~~~-~~~--~-~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~ 393 (467)
T PRK09556 324 RRALVACIALALIIFTLGVYQH-ATS--E-YMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTF 393 (467)
T ss_pred CchHHHHHHHHHHHHHHHHHHh-cCc--H-HHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHH
Confidence 8876554433333222222111 111 1 11222233333332232223345667999999999999998755
No 15
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=4.3e-31 Score=246.48 Aligned_cols=338 Identities=24% Similarity=0.341 Sum_probs=254.7
Q ss_pred HHHHHHhhccccchhhhHH-HHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHH
Q 013991 47 WIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (432)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 125 (432)
++..++..+......+.+| .+.+++|.+..+ .+++.+++.++..+++++.|+++||+|||+++.++.++.+++
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~ 75 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQ------IGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALG 75 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHC------HHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhH
Confidence 4567778888888899999 889999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcc
Q 013991 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLF 204 (432)
Q Consensus 126 ~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~ 204 (432)
.++..++++.+.+++.|++.|++.+...+. .+++.|++|+++|++++++.+...++|.+++|.+++.+.+ .+
T Consensus 76 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~-------~~ 148 (352)
T PF07690_consen 76 SLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLIS-------YF 148 (352)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------HC
T ss_pred HHHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhh-------cc
Confidence 777667688889999999999998888776 9999999999999999999999999999999999999987 44
Q ss_pred cccccccCccchHHHHHHHHHHHHHHHH-HhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCC-Cccccccch
Q 013991 205 SSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT-PKKSLLKNW 282 (432)
Q Consensus 205 gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 282 (432)
|| +.++.+.++..++..+. ..++++++++++.++++++. ++++++.. ..+..++++
T Consensus 149 ~~---------~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~ 206 (352)
T PF07690_consen 149 GW---------RWAFLISAILSLIAAILFILFLPEPPPPRERESPKESE-------------SKKPKPLKPGFKSLFKNP 206 (352)
T ss_dssp HH---------CCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT---------------HHHCCCH-CTHHHHHH
T ss_pred cc---------ccccccccchhhhhhhhHhhhhhhcccccccccccccc-------------cccccccccccccccccc
Confidence 44 44447777666665443 34555554443332221110 00111112 256667777
Q ss_pred hHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccc-cchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHH
Q 013991 283 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYS-TQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 361 (432)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 361 (432)
.++......+...+.......+.|.|..+. +|++ ..+.+......++...+++ ++.+++.||+++++......
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~ 280 (352)
T PF07690_consen 207 VLWILLIAFFLFFFVFSGFSFFLPLYLQEV-----LGFSGPSQAGLLFSIFGIVGIIGS-LLAGRLSDRFGRRRRLLIAI 280 (352)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHCCHH-----HHCCTHHHHHHHHHHHHHHHHHHH-HHHHHHHHHTTCHHHHHHHH
T ss_pred hhhhhhhhhhHHHHHHHHhhcccchhhhhc-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCcHHHHHHHH
Confidence 776455555555556667888888886655 6888 7899999999999998887 58899999999877777666
Q ss_pred HHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHHh
Q 013991 362 VLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFVK 428 (432)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~~ 428 (432)
....+....+.......+ .........+.+++.+...+.......+.+|++++|++.|.+....
T Consensus 281 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 344 (352)
T PF07690_consen 281 LLLILGALGLLLLPFSSS---PVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIG 344 (352)
T ss_dssp HHHHHHHHHHCCSHHHCH---HHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 665555554444333311 1223334555666777788999999999999999999999988764
No 16
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=1.2e-30 Score=248.31 Aligned_cols=336 Identities=16% Similarity=0.074 Sum_probs=249.7
Q ss_pred CCchhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHH
Q 013991 38 LPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (432)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~ 117 (432)
.++..+...+...+++.++.....+..|.+.+++|.++++ .+++.+.+.++..+++++.|+++||+|||+++..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 85 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQ------MGWAFSAGILGLLPGALLGGRLADRIGRKRILIV 85 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHH
Confidence 3344556777788888999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhccc
Q 013991 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (432)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (432)
+.++..++.+++.++++++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+.+..+|..+++.+++.+.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~- 164 (406)
T PRK11551 86 SVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAG- 164 (406)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-
Confidence 99999999999999999999999999999998887775 8999999999999999999999999999999999988876
Q ss_pred CCcCCCcccccccccCccchHHHHHHHHHHHHH-HHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCc
Q 013991 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPK 275 (432)
Q Consensus 197 ~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (432)
..+|+..+.+.++..++. .+...++||++++.+++.++++. +. ..
T Consensus 165 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~-----------------~~ 210 (406)
T PRK11551 165 ---------------DAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQR--AP-----------------VL 210 (406)
T ss_pred ---------------ccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhh--hh-----------------hH
Confidence 344555556655544443 33445678876543221110000 00 00
Q ss_pred cccc---cchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhC
Q 013991 276 KSLL---KNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG 352 (432)
Q Consensus 276 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 352 (432)
+..+ +.+..+......+...........+.|.+..+ .|+++.+.+......+++.++++ ++.+++.||++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~------~g~s~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g 283 (406)
T PRK11551 211 RALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG------QGLSRSQAGLVQIAFNIGGALGS-LLIGALMDRLR 283 (406)
T ss_pred HHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CCCChhhhhHHHHHHHHHHHHHH-HHHHHHHHHHh
Confidence 0011 11222223333333334444555667777755 48899999999999999999998 58899999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 353 PIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
+++.+..+.+...+++..+....... ...+..++.+++..+..+...++..+.+|+++|+++.|..+..
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~ 352 (406)
T PRK11551 284 PRRVVLLIYAGILASLAALAAAPSFA------GMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAV 352 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcHH------HHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHh
Confidence 99988776665555544443332111 2233444555566667788889999999999999999988764
No 17
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=3e-30 Score=243.89 Aligned_cols=338 Identities=17% Similarity=0.153 Sum_probs=254.0
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 120 (432)
+..+.+....++...+.....+..|.+.+++|.++++ .+++.+.+.++..+++++.|+++||+|||+++..+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~ 78 (385)
T TIGR00710 5 AFALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASI------VQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLF 78 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHH
Confidence 4444555556667777888889999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCc
Q 013991 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (432)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 199 (432)
+..++.+++.++++++.+++.|++.|++.+...+. .+++.|++|+++|++.+++.+....+|..++|.+++.+.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~---- 154 (385)
T TIGR00710 79 IFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILV---- 154 (385)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 99999999999999999999999999998887775 9999999999999999999999999999999999999887
Q ss_pred CCCcccccccccCccchHHHHHHHHHHHHHHH-HHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCcccc
Q 013991 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 278 (432)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (432)
.++|+.++.+.++..++..+ ..+..||+++++++++ .+. .....++.
T Consensus 155 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------------------~~~~~~~~ 202 (385)
T TIGR00710 155 ------------WLSWHAIFAFLSLAGILLSALIFFILPETLPYEARIQ--IST------------------YFETFLLL 202 (385)
T ss_pred ------------HcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccCC--HHH------------------HHHHHHHH
Confidence 34455555666655554333 3445666543322110 000 00123456
Q ss_pred ccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHH
Q 013991 279 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (432)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 358 (432)
+|+++++...+...+..........+.|.+..+. +|+++.+.+.+.....++..+++ ++.+++.||+++|+...
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~g~~~~~~~~~~~~~~-~~~g~l~~~~~~~~~~~ 276 (385)
T TIGR00710 203 LKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDI-----MGVSPSVFGLLFALNIIAMIFGG-FLNGRFIKKWGAKSLLR 276 (385)
T ss_pred HcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHH
Confidence 7778877766666555555555666667666544 68899999999999999888887 58899999999999888
Q ss_pred HHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHHh
Q 013991 359 IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFVK 428 (432)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~~ 428 (432)
.+..+..++..++........ ..+........+.+.+.+...+.......+..| ++++++.+.+....
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~ 344 (385)
T TIGR00710 277 MGLILFAVSAVLLEITAILGL-GSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLR 344 (385)
T ss_pred HHHHHHHHHHHHHHHHHHhcc-chHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHH
Confidence 877766666555543322111 112233334445556666677777777777776 57888888877654
No 18
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=1.7e-30 Score=252.40 Aligned_cols=357 Identities=13% Similarity=0.083 Sum_probs=236.1
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhH-HHHHHhHHHHHHHHhhhhhhhccCChHHHHHHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGY-VGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~-~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (432)
+.+....++.+++.++...+....|.+.++++.+.++.. .....+ ..++..++..++++++|+++||+|||+++.++.
T Consensus 16 ~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 16 KAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSV-QMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 445567789999999999999999999999976554310 111111 247788999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhHHH--------HHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHH
Q 013991 120 ASVVIFNTLFGLSVNFWM--------AVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (432)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~--------l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 190 (432)
++++++++++++++|+++ ++++|+++|++.|...+. .++++|++|+++|++..++.+.+..+|..+|+.+.
T Consensus 95 ~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~ 174 (490)
T PRK10642 95 VIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVV 174 (490)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999875 899999999998887775 99999999999999999999988888888888776
Q ss_pred hhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhcc
Q 013991 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGR 270 (432)
Q Consensus 191 ~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (432)
..+.....+ .....++||.++++.+++.++.++....+||+|++.+.+++.++ ..++. .+++
T Consensus 175 ~~~~~~~~~--------~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~--------~~~~~--~~~~ 236 (490)
T PRK10642 175 VLISTIVGE--------ANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQ--------GDREG--LQDG 236 (490)
T ss_pred HHHHHhcCH--------HHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhh--------hcccc--cccc
Confidence 655431100 00114567777777766655555555678887664321110000 00000 0001
Q ss_pred CCCCccccccc-hhHHH-HHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHH
Q 013991 271 EATPKKSLLKN-WPLMS-SIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLE 348 (432)
Q Consensus 271 ~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~ 348 (432)
...+.++++++ ++.+. .....++..........+.|.|+.+. +|++..+.+.......++..++. ++.+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~s~~~~~~~~~~~~~~~~~~~-~~~g~l~ 310 (490)
T PRK10642 237 PKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHN-----LHYSEDHGVLIIIAIMIGMLFVQ-PVMGLLS 310 (490)
T ss_pred ccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 12234444442 22222 22223334455566677888887654 57777777777777777777776 5889999
Q ss_pred HHhChhHHHHHHHHHHHHHHHH-hhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHH
Q 013991 349 RILGPIMVARIAGVLTIPLLTS-YPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWF 426 (432)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~ 426 (432)
||+|||+.+..+.+...+.... +..... .. ...+.+..++.+++.+...+.......+..|++.||++.+..+.
T Consensus 311 dr~grr~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~ 385 (490)
T PRK10642 311 DRFGRRPFVILGSVALFVLAIPAFILINS-NV---IGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFN 385 (490)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHhC-CC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHH
Confidence 9999999887776543332222 211111 11 11122233333333344445566677789999999998886443
No 19
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=2.8e-30 Score=247.37 Aligned_cols=346 Identities=15% Similarity=0.197 Sum_probs=242.7
Q ss_pred CchhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHH
Q 013991 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (432)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~ 118 (432)
+++.++..++..+.+.++.....+..|.+.+++|.++.+ .+++.+++.++..+++++.|+++||+|||+++.++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~------~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~ 89 (426)
T PRK12307 16 QKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDME------GAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWS 89 (426)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHH
Confidence 345566778888888899988999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccC
Q 013991 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (432)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 197 (432)
.++.+++.++++++++++.++++|+++|++.+...+. ..++.|++|+|+|+++.++...+.++|.++++.+.+.+.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~-- 167 (426)
T PRK12307 90 IVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAE-- 167 (426)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcc--
Confidence 9999999999999999999999999999998877765 8999999999999999999999999999999999988887
Q ss_pred CcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccc
Q 013991 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKS 277 (432)
Q Consensus 198 ~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (432)
.+| |+.++.+..+..++.+......||++++.+++.++ ..++.++..+......++
T Consensus 168 -----~~~---------w~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~ 223 (426)
T PRK12307 168 -----AYG---------WRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLSG----------KGKHSQSAWSVFSLSMKG 223 (426)
T ss_pred -----cCC---------HHHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhhc----------cccccccchhhhhHHHHH
Confidence 344 44444554333322222222334433211110000 000000000001123556
Q ss_pred cccchhHHHHHHHHHH---HHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChh
Q 013991 278 LLKNWPLMSSIIVYCV---FSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (432)
Q Consensus 278 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 354 (432)
.++++.++........ ..........++|.|..+ .|+++.+.+.+.+...++..+++ ++.+++.||+++|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~g~-~~~g~l~dr~~~~ 296 (426)
T PRK12307 224 LFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG------EGFDTGVVSNLMTAAAFGTVLGN-IVWGLCADRIGLK 296 (426)
T ss_pred HHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccH
Confidence 7777776554333222 222223355677877765 47888899999999899999988 5889999999999
Q ss_pred HHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 355 MVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
+....+.++..+.++.+....... . .......+..++...+..+.....+.|.+|++.||++.|..+.+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~ 365 (426)
T PRK12307 297 KTFSIGLLMSFLFIFPLFRIPQDN--Y--LLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNL 365 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccc--H--HHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHH
Confidence 988887776655544433222111 1 11111111111222233345566778999999999999976543
No 20
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.98 E-value=2.7e-30 Score=247.36 Aligned_cols=351 Identities=13% Similarity=0.102 Sum_probs=240.8
Q ss_pred hHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHH
Q 013991 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (432)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 121 (432)
.+....+..++..+....+...+|.+.+++|.+..+ .|++.+.+.++..+++++.|+++||+|||+++.++.++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~ 97 (434)
T PRK11663 24 ILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSD------IGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIA 97 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHH
Confidence 344556677777777778888999999999999998 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcC
Q 013991 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (432)
Q Consensus 122 ~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 200 (432)
.+++.++++++++++.+++.|++.|++.|...+. .+++.|++|+++|++++++.+.+.++|..++|.+++++.+
T Consensus 98 ~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~----- 172 (434)
T PRK11663 98 TGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIAL----- 172 (434)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 9999999999999999999999999987776665 8999999999999999999999999999999999999987
Q ss_pred CCcccccccccCccchHHHHHHHHHHHH-HHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCC-c-cc
Q 013991 201 PNLFSSESLFGKFPYFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP-K-KS 277 (432)
Q Consensus 201 ~~~~gw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~ 277 (432)
.++|+..+.+.++..++ .++..+.+||++++....+..+... +. ++..++. +.++.+... . ..
T Consensus 173 -----------~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~-~~~~~~~-~~~~~~~~~~~~~~ 238 (434)
T PRK11663 173 -----------HYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRH-DA-LELAQQQ-EGAGLSRKEILTKY 238 (434)
T ss_pred -----------cccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccc-cc-cccchhc-cccCCChhhhHHHH
Confidence 34455555666655444 3344456777654321111000000 00 0000000 000000111 1 12
Q ss_pred cccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHh--ChhH
Q 013991 278 LLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL--GPIM 355 (432)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~ 355 (432)
.++++.++...+..++..........++|.|+.+. +|++..+++...+...+++.+++ ++.+++.||+ ++|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~s~~~a~~~~~~~~~~~~~g~-~~~g~l~dr~~~~~r~ 312 (434)
T PRK11663 239 VLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSET-----LGVDLVTANSAVSMFELGGFIGA-LVAGWGSDKLFNGNRG 312 (434)
T ss_pred HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHH-HHHhhhHHHhccCCcc
Confidence 56778888777777776777777778889888655 68999999999999999999998 5999999998 3322
Q ss_pred HH-HHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 356 VA-RIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 356 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
.. ........+....+....... .. ......+..+++.............+..|++.||++.|..+..
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 381 (434)
T PRK11663 313 PMNLIFAAGILLSVGSLWLMPFAS---YV-MQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLF 381 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHccccc---HH-HHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHH
Confidence 22 221111111111111111111 11 1111222222222222223345667888999999999988754
No 21
>PRK10504 putative transporter; Provisional
Probab=99.98 E-value=1.2e-29 Score=245.98 Aligned_cols=357 Identities=14% Similarity=0.113 Sum_probs=263.0
Q ss_pred chhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHH
Q 013991 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (432)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (432)
.+.++.++...++..++.....+.+|.+.+++|.+..+ .+++.+.+.++..++.+++|+++||+|||++++.+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~ 82 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLH------MHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAI 82 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHH
Confidence 34567778888888888889999999999999999998 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCC
Q 013991 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (432)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (432)
++.+++.++++++++++.+++.|+++|++.+...+. .+++.|.+|+++|+++.+..+...++|..+||.+++.+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~--- 159 (471)
T PRK10504 83 VLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVE--- 159 (471)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh---
Confidence 999999999999999999999999999998888776 8899999999999999999999999999999999999988
Q ss_pred cCCCcccccccccCccchHHHHHHHHHHHHHHH-HHhhcccccCCCCCCCcchhhhHH---------Hhhhhh-------
Q 013991 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYD---------ALESAS------- 261 (432)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~---------~~~~~~------- 261 (432)
..|| +..+.+......+..+ .....|+.+... .+.+....... ..++.+
T Consensus 160 ----~~gw---------~~~f~~~~~~~~l~~~~~~~~~~~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (471)
T PRK10504 160 ----YASW---------HWIFLINIPVGIIGAIATLMLMPNYTMQT-RRFDLSGFLLLAVGMATLTLALDGSKGLGLSPL 225 (471)
T ss_pred ----hccH---------HHHHHHHHHHHHHHHHHHHHhCCCccccC-CCCChHHHHHHHHHHHHHHHHHhcCCcCCcchH
Confidence 3444 4444555544444333 333444433221 11111100000 000000
Q ss_pred ---------------hhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhh
Q 013991 262 ---------------AEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVG 326 (432)
Q Consensus 262 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g 326 (432)
...++.+.+++....+++||++++......++..........+.|.|.+.. +|.++.+.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~g 300 (471)
T PRK10504 226 AIAGLVAVGVVALLLYLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIG-----LGFSPFHAG 300 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHHH
Confidence 000111222233344678999988887777777766666667788887754 688999999
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHH
Q 013991 327 EVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFI 406 (432)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (432)
+......++..++. ++.+++.||+++|+.+..+..+..+...++.+..... ..+ ......++.+++.+...+..+.
T Consensus 301 ~~~~~~~~~~~~~~-~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~g~~~~~~~~~~~~ 376 (471)
T PRK10504 301 LMMIPMVLGSMGMK-RIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLG--WYY-LLPFVLFLQGMVNSTRFSSMNT 376 (471)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccc--cHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 99888888877776 5889999999999999888877766655554432111 111 1222334445566667778888
Q ss_pred HHhccccccchhhhhhHHHHHh
Q 013991 407 LQNRAVVRVLTYTLSCHFWFVK 428 (432)
Q Consensus 407 ~~~~~~p~~~~g~~~~~~~~~~ 428 (432)
...+.+|++.+|++++.+.+.+
T Consensus 377 ~~~~~~~~~~~g~~~~~~~~~~ 398 (471)
T PRK10504 377 LTLKDLPDNLASSGNSLLSMIM 398 (471)
T ss_pred HHHHcCCHHhccchHHHHHHHH
Confidence 8889999999999999887764
No 22
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.98 E-value=1.9e-29 Score=238.18 Aligned_cols=322 Identities=16% Similarity=0.147 Sum_probs=230.7
Q ss_pred CchhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHH
Q 013991 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (432)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~ 118 (432)
.|+.+..+....+..........+.+|.+.+++|.++++ .++..+++.++..+++++.|+++||+|||+++..+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~ 91 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGV------AGQSVTVTAFVAMFASLFITQTIQATDRRYVVILF 91 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHH
Confidence 455555555554445555556667789999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccC
Q 013991 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (432)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 197 (432)
.++.+++.++++++++++.+++.|+++|++.+...+. .+++.|++|+++|++++++...+.++|..+||.+++.+.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~-- 169 (394)
T PRK10213 92 AVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGE-- 169 (394)
T ss_pred HHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 9999999999999999999999999999998888776 8899999999999999999999999999999999999988
Q ss_pred CcCCCcccccccccCccchHHHHHHHHHHHHHHHH-HhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCcc
Q 013991 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 276 (432)
Q Consensus 198 ~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (432)
.+|| +..+.+.+++.++..+. ....||+++++++ + ....+
T Consensus 170 -----~~gw---------~~~f~~~~~l~~~~~l~~~~~~p~~~~~~~~-----~--------------------~~~~~ 210 (394)
T PRK10213 170 -----LIGW---------RNVFNAAAVMGVLCIFWIIKSLPSLPGEPSH-----Q--------------------KQNTF 210 (394)
T ss_pred -----hcCH---------HHHHHHHHHHHHHHHHHHHHHCCCCCccccc-----c--------------------hhHHH
Confidence 4444 44446655554443332 3345664321100 0 01234
Q ss_pred ccccchhHHHHHHHHHHHHHHhhhHHHHH-HhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhH
Q 013991 277 SLLKNWPLMSSIIVYCVFSLHDMAYSEIF-SLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM 355 (432)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 355 (432)
+.+|+|.++...+..++..........++ |.|..+ +|+++.+.+......+++..+++ .+.+++.||.++ +
T Consensus 211 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~------~g~s~~~~g~~~~~~~~~~iig~-~~~~~l~~r~~~-~ 282 (394)
T PRK10213 211 RLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNL------AGFGVDGLTLVLLSFGIASFVGT-SLSSFILKRSVK-L 282 (394)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------cCCChhHHHHHHHHHHHHHHHHH-HHHHHHHhccch-h
Confidence 56778888776665555554444555555 555433 58899999999999999999998 588999998544 4
Q ss_pred HHHHHHHH-HHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhh
Q 013991 356 VARIAGVL-TIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSC 422 (432)
Q Consensus 356 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~ 422 (432)
.+..+..+ ....+++...... .+ .+....++.+++.....+...+.+.+..|++ ++++.+
T Consensus 283 ~l~~~~~~~~~~~~~l~~~~~~-----~~-~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 343 (394)
T PRK10213 283 ALAGAPLVLAVSALVLTLWGSD-----KI-VATGVAIIWGLTFALVPVGWSTWITRSLADQ-AEKAGS 343 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhh-----HH-HHHHHHHHHHHHHHhhhHHHHHHHHHHCccc-HHHHHH
Confidence 33333333 2222333222211 11 2333455556666777777887888888744 444444
No 23
>PRK10133 L-fucose transporter; Provisional
Probab=99.98 E-value=1.1e-29 Score=242.38 Aligned_cols=345 Identities=14% Similarity=0.112 Sum_probs=251.8
Q ss_pred chhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHH
Q 013991 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (432)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (432)
...+..+.+..++..+......+..|.+++++|.++.+ .|+..+.+.+++.+++++.|+++||+|||+++.++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~------~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~ 98 (438)
T PRK10133 25 IIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQ------AGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGL 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 34556667777888888888999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH---hhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 120 ASVVIFNTLF---GLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 120 ~~~~~~~~~~---~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
+++.++++++ ..+++++.++++|+++|++.|...+. .+++.|+.|+++|.+.++..+....+|..+||.+++.+..
T Consensus 99 ~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~ 178 (438)
T PRK10133 99 FLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLIL 178 (438)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999876 46789999999999999998888775 8889998777777778999999999999999999887652
Q ss_pred cCCcC-----------CCcccccccccCccchHHHHHHHHHH-HHHHHH-HhhcccccCCCCCCCcchhhhHHHhhhhhh
Q 013991 196 PAEKY-----------PNLFSSESLFGKFPYFLPCLCISLFA-FGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASA 262 (432)
Q Consensus 196 ~~~~~-----------~~~~gw~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 262 (432)
...+. ....+||..+ ..+|+.++....... ++.++. ...+||.++++ +++.+
T Consensus 179 ~~~~~~~~~~~~~l~~~~~~~w~~~~-~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~---~~~~~----------- 243 (438)
T PRK10133 179 SNVPHQSQDVLDKMTPEQLSAYKHSL-VLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDN---HSDAK----------- 243 (438)
T ss_pred cCCcccchhhhhccChhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc---ccccc-----------
Confidence 11000 0012566554 456888776433322 222222 23344422110 00000
Q ss_pred hhhhhhccCCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhh-cCCCcCCCcccccchhhHHHHHHHHHHHHHHH
Q 013991 263 EVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWA-NSPKKLGGLNYSTQMVGEVLAITGFSLLVFQL 341 (432)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~ 341 (432)
+.+.....++++++|.++...+..++......+...+.+.|+ ++. +|+++.+++..+....++..+++
T Consensus 244 -----~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~-----~g~s~~~ag~~~~~~~~~~~vG~- 312 (438)
T PRK10133 244 -----QGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEI-----PGMTAGFAANYLTGTMVCFFIGR- 312 (438)
T ss_pred -----ccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-----CCCCHHHHHHHHHHHHHHHHHHH-
Confidence 000112345678888887766666666666666666777774 333 69999999999999999999998
Q ss_pred HhHHHHHHHhChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhh
Q 013991 342 SLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLS 421 (432)
Q Consensus 342 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~ 421 (432)
++++++.||+++++++..+..+..+.+.+..+... . .......+.+++.+..+|..++...+..|++ .+++.
T Consensus 313 ~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~---~----~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as 384 (438)
T PRK10133 313 FTGTWLISRFAPHKVLAAYALIAMALCLISAFAGG---H----VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGS 384 (438)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCC---h----HHHHHHHHHHHHHHHHHHHHHHHHHcccchh-hccch
Confidence 59999999999999988887666555544333221 1 1123445567788899999999999988764 45555
Q ss_pred hHH
Q 013991 422 CHF 424 (432)
Q Consensus 422 ~~~ 424 (432)
++.
T Consensus 385 ~l~ 387 (438)
T PRK10133 385 SFI 387 (438)
T ss_pred hHH
Confidence 544
No 24
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.98 E-value=1.2e-30 Score=245.81 Aligned_cols=347 Identities=14% Similarity=0.098 Sum_probs=243.1
Q ss_pred HHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHH
Q 013991 49 IVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL 128 (432)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 128 (432)
..+.............|.+.+++|.+..+ .+++.+++.++..+++++.|+++||+|||+++.++.++..++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 76 (379)
T TIGR00881 3 GYAAYYLVRKNFALAMPYLVEEIGLSKTD------LGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLF 76 (379)
T ss_pred hhhHHHHhHHhhhhhhHHHHHHhCCCHhH------HHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHH
Confidence 34566677778888899999999999999 999999999999999999999999999999999999999999999
Q ss_pred HhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHH-HHHhhhcccCCcCCCcccc
Q 013991 129 FGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGP-ALGGFLAQPAEKYPNLFSS 206 (432)
Q Consensus 129 ~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~-~~~~~l~~~~~~~~~~~gw 206 (432)
++++++++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+.+..+|..++| .+++.+.+
T Consensus 77 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~----------- 145 (379)
T TIGR00881 77 FGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAE----------- 145 (379)
T ss_pred HHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHh-----------
Confidence 999999999999999999998887775 89999999999999999999999999999999 56666665
Q ss_pred cccccCccchHHHHHHHHHHHH-HHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccchhHH
Q 013991 207 ESLFGKFPYFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLM 285 (432)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (432)
..+|+..+.+.+++.++ .++..++.||+++..+.++++++.. ++.++.+++.+++.+..+...+..++++.++
T Consensus 146 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (379)
T TIGR00881 146 -----LYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMPN-EEPDGDAEKKEEELTKKQIFLQYVLLNKVLW 219 (379)
T ss_pred -----cCCchhHHHHHHHHHHHHHHHHheeeCCCccccccCccccCcc-cccccccccccccccchHHHHHHHHhcchHH
Confidence 33444444665555444 3444555666554322111111100 0000000000001111122345677888888
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhCh-hHHHHH-HH-H
Q 013991 286 SSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP-IMVARI-AG-V 362 (432)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~-~~-~ 362 (432)
...+..++..........+.|.|..+. +|+++.+.+.......++..++. ++.+++.||..+ ++.... .. .
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~~r~~~~~~~~~~~~~~~ 293 (379)
T TIGR00881 220 YISLGYVFVYVVRTGILDWSPLYLTQE-----KGFSKEKASWAFTLYELGGLVGT-LLAGWLSDKLFNGRRGPLAVFFMA 293 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCCCHHHHHHHHHHHHHHcchhH-HHHHHHHHHHcCCcchHHHHHHHH
Confidence 887777777777778888889888765 68899999999999999999988 588999998633 322221 11 1
Q ss_pred HHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHHh
Q 013991 363 LTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFVK 428 (432)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~~ 428 (432)
...+.+........ . . ........+..+.......+.......+..|++.||++.|.+....
T Consensus 294 ~~~~~~~~~~~~~~-~--~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 355 (379)
T TIGR00881 294 LIIVSLLVYWLNPA-A--N-PLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFA 355 (379)
T ss_pred HHHHHHHHHhcCcc-h--h-HHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhh
Confidence 11111111111001 1 1 1122233333444444555566778899999999999999987654
No 25
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.98 E-value=4.7e-30 Score=241.72 Aligned_cols=324 Identities=13% Similarity=0.081 Sum_probs=235.7
Q ss_pred hhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhh
Q 013991 53 TALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS 132 (432)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 132 (432)
.........+..|.+.+++|.++.+ .+++.+++.++..+++++.|+++||+|||+++.++.++.+++.++++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~ 88 (377)
T TIGR00890 15 TSGYVYTWTLLAPPLGRYFGVGVTA------VAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIA 88 (377)
T ss_pred HhhHHhhhhhHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHH
Confidence 3333556788899999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCccccccccc
Q 013991 133 VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFG 211 (432)
Q Consensus 133 ~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~ 211 (432)
++++.++++|++.|++.+...+. ...+.|++| |+|+++.++...+.++|..+++.+.+.+.+
T Consensus 89 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---------------- 151 (377)
T TIGR00890 89 DSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVIN---------------- 151 (377)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHh----------------
Confidence 99999999999999998876554 777888886 679999999999999998877666666665
Q ss_pred CccchHHHHHHHHHHHHHHHH-HhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccchhHHHHHHH
Q 013991 212 KFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIV 290 (432)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (432)
.++|+..+.+.++..++..+. .++++|+++++.+++++.+ +.....++.+|++.++...+.
T Consensus 152 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~ 213 (377)
T TIGR00890 152 LEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTNIEVS------------------VKDYTVWEMLRTPQFWVLYLS 213 (377)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHheecCchhccccCcccc------------------hhhhhHHHHHcCccHHHHHHH
Confidence 334555557766666554433 3445543322111110000 001123456777777766665
Q ss_pred HHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHHHHHH
Q 013991 291 YCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTS 370 (432)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 370 (432)
.+...........+.+.|.++ +|.+..+.+...+..++...+++ ++.+++.||++||+.+..+..+..++.+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 286 (377)
T TIGR00890 214 FFLNAVSGLLLIGLYKPYGQS------LGLSDGFLVLAVSISSIFNGGGR-PFLGALSDKIGRQKTMSIVFGISAVGMAA 286 (377)
T ss_pred HHHHhHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhhhHHHHHHHHHHHH
Confidence 555555544455555555433 57788888999999999999988 58899999999999988887777776665
Q ss_pred hhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHHh
Q 013991 371 YPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFVK 428 (432)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~~ 428 (432)
+....... . ........+.++..+...+....+..|..|+++|+++.|.++...
T Consensus 287 ~~~~~~~~---~-~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 340 (377)
T TIGR00890 287 MLFIPMLN---D-VLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAK 340 (377)
T ss_pred HHHcccch---h-HHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHH
Confidence 54433221 1 112222233344455555666778899999999999999887653
No 26
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.97 E-value=2.7e-29 Score=237.01 Aligned_cols=335 Identities=12% Similarity=0.065 Sum_probs=237.3
Q ss_pred hHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHH
Q 013991 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (432)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 121 (432)
.+..++...++..++........+.+.++++.+..+ .+++.+.+.+++.+..++.|+++||+|||++++++.++
T Consensus 4 ~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~ 77 (393)
T PRK11195 4 GFYAIMAAQFFSALADNALLFAAIALLKELHYPDWS------QPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGI 77 (393)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHH------HHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHH
Confidence 455677788888887666667677778999999888 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcC
Q 013991 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (432)
Q Consensus 122 ~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 200 (432)
.++++++++++.+. ++.|+++|++.+...|+ .+++.|++|+++|++++++.+....+|.++||.++|++.+
T Consensus 78 ~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~----- 149 (393)
T PRK11195 78 KLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALAD----- 149 (393)
T ss_pred HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 99988888777664 78899999999999887 9999999999999999999999999999999999999986
Q ss_pred CCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCcccccc
Q 013991 201 PNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLK 280 (432)
Q Consensus 201 ~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (432)
. .|+.++.+.+...++..+..+.+||++++++.++.+.....++.. ...+.+++
T Consensus 150 -----------~-~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~l~~ 203 (393)
T PRK11195 150 -----------P-HAEAALAVCALIYLLAALFNLFIPRLGARRPGQSWNPIALLRDFF--------------HACRVLWR 203 (393)
T ss_pred -----------H-HHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCCCHHHHHHHHH--------------HHHHHHHh
Confidence 1 144444544444444444556778765432221111110000000 01235567
Q ss_pred chhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHH
Q 013991 281 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 360 (432)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 360 (432)
+|.++.......+...........++.|.++. +|.++.+.|.+....+++.++++ +..+++.||.++++....+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----lg~s~~~~G~~~~~~~~g~i~g~-~~~~~l~~~~~~~~~~~~g 277 (393)
T PRK11195 204 DKLGRFSLAGTTLFWGAGATLRFLVLAWAPVA-----LGITLNQPAYLQAVVAIGIAVGA-GAAARLVTLETVLRVLPAG 277 (393)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCChhHHHHHHHHHHHHHHHHH-HHHHHHhcCCcccchHHHH
Confidence 77666554444444444445555666666655 68899999999999999999998 5778888888877776666
Q ss_pred HHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccc-hhhhhhHHHHHhh
Q 013991 361 GVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVL-TYTLSCHFWFVKL 429 (432)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~g~~~~~~~~~~~ 429 (432)
... .+....++.... . .......++.+++.+...+..++...+..|++. +|++.+..+..+.
T Consensus 278 ~~~-~~~~~~~~~~~~-----~-~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~ 340 (393)
T PRK11195 278 ILM-GLVVLLMALQHS-----L-LPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNEN 340 (393)
T ss_pred HHH-HHHHHHHHHHhH-----H-HHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHH
Confidence 432 332222222111 1 122333444555556656667777777766654 7888888877654
No 27
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.97 E-value=3.6e-29 Score=238.07 Aligned_cols=335 Identities=17% Similarity=0.115 Sum_probs=247.9
Q ss_pred HHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHH
Q 013991 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (432)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 124 (432)
.+.+..++..++...+.+.+|.+.+++|.++.+ .++..+.+.++..+++++.|+++||+|||+++.++..+..+
T Consensus 17 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~ 90 (406)
T PRK15402 17 CLVLFEFATYIANDMIQPGMLAVVEDFNAGAEW------VPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFIL 90 (406)
T ss_pred HHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 455666677778888889999999999999998 99999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCc
Q 013991 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (432)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 203 (432)
+.+++..+++++.+++.|+++|++.+...+. .+++.|.+|+++|.+.+++......+|..+||.+++.+.+ .
T Consensus 91 ~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~-------~ 163 (406)
T PRK15402 91 TCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIH-------V 163 (406)
T ss_pred HHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------c
Confidence 9999999999999999999999998877665 8899999999999999999988888999999999999887 3
Q ss_pred ccccccccCccchHHHHHHHHHHHHHHH-HHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccch
Q 013991 204 FSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNW 282 (432)
Q Consensus 204 ~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (432)
.|| +..+.+.++..++..+ ..+..||++++.+++.+. ++ .....+.++++|
T Consensus 164 ~~w---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--------------~~~~~~~~~~~~ 215 (406)
T PRK15402 164 LPW---------RGMFVLFAALAALSFFGLWRAMPETAGRVGEKLSL-----KE--------------LGRDYKLVLKNR 215 (406)
T ss_pred cCc---------cHHHHHHHHHHHHHHHHHHHhCCCCCccccccccH-----HH--------------HHHHHHHHHcCc
Confidence 444 4444665555554433 334566654322111000 00 011235677888
Q ss_pred hHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHH
Q 013991 283 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGV 362 (432)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 362 (432)
.++...+..++.......+....|.++.+. +|+++.+.+.......++..++. ++.+++.||+++++....+.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~g~~~~~~g~~~~~~~~~~~~g~-~~~g~l~~r~~~~~~~~~~~~ 289 (406)
T PRK15402 216 RFVAGALALGLVSLPLLAWIALSPVILISG-----EQLSSYEYGLLQVPVFGALIAGN-LTLARLTSRRPLRSLIRMGLW 289 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-----hCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHH
Confidence 888777666666555556666677776554 68888888888777777777777 588999999999999888877
Q ss_pred HHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHHh
Q 013991 363 LTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFVK 428 (432)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~~ 428 (432)
+..++...+......... .+........+.+++.+...+..+..... .+++++|++++.+...+
T Consensus 290 ~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~g~g~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~ 353 (406)
T PRK15402 290 PMVAGLLLAALATVISSH-AYLWLTAGLSLYAFGIGLANAGLYRLTLF-SSDVSKGTVSAAMGMLS 353 (406)
T ss_pred HHHHHHHHHHHHHHcccc-cHHHHHHHHHHHHHHHHHHhhhHHHHHhh-hccccccHHHHHHHHHH
Confidence 776666665544321111 11223344445555555555555555443 44588999999887765
No 28
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.97 E-value=4.9e-29 Score=235.53 Aligned_cols=310 Identities=12% Similarity=0.041 Sum_probs=228.4
Q ss_pred cchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhHHH
Q 013991 58 SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWM 137 (432)
Q Consensus 58 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 137 (432)
....+.+|.+.+|+|.|.++ .+++.+.+.+++.+++++.|+++||+|||+++..+..+++++.+.++++++++.
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~------~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ 99 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSV------AALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSAL 99 (393)
T ss_pred hccchhHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHH
Confidence 66779999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccch
Q 013991 138 AVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYF 216 (432)
Q Consensus 138 l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~ 216 (432)
++++|+++|++.+...+. ..++.|++| ++|+++++....+..+|..+|+.+++++.+. ..+||.
T Consensus 100 ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~------~~~w~~-------- 164 (393)
T PRK09705 100 LLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQH------SETWYQ-------- 164 (393)
T ss_pred HHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHh------cCCHHH--------
Confidence 999999999998887775 888899886 7899999999999999999999999998861 124443
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHH
Q 013991 217 LPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSL 296 (432)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (432)
.+...++..++.++..+...+..++.+++ ++...++.+++++.+...+.+.+...
T Consensus 165 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~l~~~~~~~l~~~~~~~~~ 219 (393)
T PRK09705 165 -TLAWWALPAVVALFAWWWQSAREVASSHK------------------------TTTTPVRVVFTPRAWTLGVYFGLING 219 (393)
T ss_pred -HHHHHHHHHHHHHHHHHHHhcCCCccccC------------------------CCcCCcccccCHhHHHHHHHHHHHHH
Confidence 33333333333222222222111110000 00112345567777776666666666
Q ss_pred HhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHHHHHHhhHHHh
Q 013991 297 HDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAM 376 (432)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (432)
.......+.|.|+.+ +|++..++|...+..+++.++++ ++.+++.||.++++....+..+..++...+.....
T Consensus 220 ~~~~~~~~lp~~l~~------~g~s~~~ag~~~~~~~i~~i~g~-~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~ 292 (393)
T PRK09705 220 GYASLIAWLPAFYIE------IGASAQYSGSLLALMTLGQAAGA-LLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPL 292 (393)
T ss_pred HHHHHHHHHHHHHHH------cCCChhhhhHHHHHHHHHHHHHH-HHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccc
Confidence 777777888888764 48899999999999999999998 58899999999999888877666666554432221
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccc-cccchhhhhhHHHHH
Q 013991 377 LSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAV-VRVLTYTLSCHFWFV 427 (432)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~g~~~~~~~~~ 427 (432)
.. .. .. ..+.+++.+...|.......+.. |++++|++++..+..
T Consensus 293 ~~---~~--~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 337 (393)
T PRK09705 293 QL---PV--LW--AMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGI 337 (393)
T ss_pred hH---HH--HH--HHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHH
Confidence 11 11 11 12233444555666665555655 467889888876654
No 29
>PRK09952 shikimate transporter; Provisional
Probab=99.97 E-value=4.8e-29 Score=238.75 Aligned_cols=352 Identities=14% Similarity=0.106 Sum_probs=230.5
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHH-HHHHh--cCCccccchhhhh-hHHHHHHhHHHHHHHHhhhhhhhccCChHHHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYF-MIKDF--QIAKREEDIGSYA-GYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~s~~~~~~~~~~-~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~ 116 (432)
+.+....+..+++.++...+....|. +.+++ +.++.+ +... ....++..++..+++++.|+++||+|||+++.
T Consensus 22 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~ 98 (438)
T PRK09952 22 RAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM---GTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLM 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH---HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHH
Confidence 44556777888899999888887774 45555 455432 1111 11223456778899999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhHH--------HHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHH
Q 013991 117 MGTASVVIFNTLFGLSVNFW--------MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGP 187 (432)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~--------~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 187 (432)
.+.+++++++++++++++++ .++++|+++|++.|...+. ..++.|++|+++|++..+..+.+..+|..+++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~ 178 (438)
T PRK09952 99 LTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLST 178 (438)
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999987 5889999999998887775 89999999999999999999999999999988
Q ss_pred HHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhh
Q 013991 188 ALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEE 267 (432)
Q Consensus 188 ~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (432)
.+...+.....+ ..+..++||.++++.++..++.+......||++++.+.+.+.++
T Consensus 179 ~~~~~l~~~~~~--------~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~---------------- 234 (438)
T PRK09952 179 GLVSLISMMTTD--------EQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAA---------------- 234 (438)
T ss_pred HHHHHHHHhCCH--------HHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhccc----------------
Confidence 877766531110 01114567777787776655444444456666543211100000
Q ss_pred hccCCCCccccccchhHHHHHH-HHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHH
Q 013991 268 EGREATPKKSLLKNWPLMSSII-VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPF 346 (432)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~ 346 (432)
.+++....+.++++++.+.... ..++..........+.|.|.++. +|++...........++...++. ++.++
T Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~-----~g~s~~~~~~~~~~~g~~~~i~~-~~~g~ 308 (438)
T PRK09952 235 AKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQN-----LGLPRELFLNIGLLVGGLSCLTI-PCFAW 308 (438)
T ss_pred ccccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 0000011223455665555433 33333444555666777777654 57777655555555566666666 58899
Q ss_pred HHHHhChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHH
Q 013991 347 LERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWF 426 (432)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~ 426 (432)
++||++||+....+.++..+....+.......+ ....+.+..++.+++.+...+..+++..|.+|++.|+++.+..+.
T Consensus 309 l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~ 386 (438)
T PRK09952 309 LADRFGRRRVYITGALIGTLSAFPFFMALEAQS--IFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQ 386 (438)
T ss_pred HHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHH
Confidence 999999999888776655443332222111111 111222233344455555667788899999999999988887654
Q ss_pred H
Q 013991 427 V 427 (432)
Q Consensus 427 ~ 427 (432)
+
T Consensus 387 ~ 387 (438)
T PRK09952 387 V 387 (438)
T ss_pred H
Confidence 3
No 30
>PRK15075 citrate-proton symporter; Provisional
Probab=99.97 E-value=6.3e-29 Score=238.04 Aligned_cols=344 Identities=15% Similarity=0.099 Sum_probs=225.2
Q ss_pred chhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHH-HH-----HhHHHHHHHHhhhhhhhccCChH
Q 013991 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVG-SS-----FMFGRALTSVFWGLVADRYGRKP 113 (432)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~-s~-----~~~~~~~~~~~~G~l~dr~Grr~ 113 (432)
++.....++..+++.++...+....|.+.++++.++.+ .+... +. ..++..+++++.|+++||+|||+
T Consensus 14 ~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~ 87 (434)
T PRK15075 14 ARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNE------FASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRK 87 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCc------hHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHH
Confidence 34566788899999999999999999999999998876 44332 22 23333578899999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHH--------HHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHH
Q 013991 114 VIIMGTASVVIFNTLFGLSVNFW--------MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLI 184 (432)
Q Consensus 114 ~l~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 184 (432)
+++.+.++..+++++++++++++ .++++|+++|++.+...+. ..+++|++|+++|++.+++.+...++|..
T Consensus 88 ~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~ 167 (434)
T PRK15075 88 GLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVV 167 (434)
T ss_pred HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHH
Confidence 99999999999999999999877 4689999999998887765 89999999999999999999999989988
Q ss_pred HHHHHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhh
Q 013991 185 IGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEV 264 (432)
Q Consensus 185 ~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (432)
+++.+++.+.....+. .. ..++||.++++.++...+........||+++..+++
T Consensus 168 ~g~~~g~~l~~~~~~~-------~~-~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~------------------ 221 (434)
T PRK15075 168 FAALLGYLLNQWLSPA-------QM-AEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLARK------------------ 221 (434)
T ss_pred HHHHHHHHHHHhCCHH-------HH-hccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhh------------------
Confidence 8888888775311100 00 034566666654433222222112222221100000
Q ss_pred hhhhccCCCCccccccchhHHHH-HHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHh
Q 013991 265 KEEEGREATPKKSLLKNWPLMSS-IIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSL 343 (432)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~ 343 (432)
.+.+.....+...++++.+.. ....+...........+.|.|+++. +|++..+.+....+..++.+++. ++
T Consensus 222 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~~~~~~~~~~~~~~~~~~~~~-~~ 293 (434)
T PRK15075 222 --HRPSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTV-----LHLSAADSLLVTLCVGVSNFIWL-PI 293 (434)
T ss_pred --hccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH-HH
Confidence 000001112223344443332 2223333344555667788888765 68888888888888888888887 58
Q ss_pred HHHHHHHhChhHHHHHHHHHHHHHHH-HhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhh
Q 013991 344 YPFLERILGPIMVARIAGVLTIPLLT-SYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSC 422 (432)
Q Consensus 344 ~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~ 422 (432)
.+++.||+++|+....+.....+... .+....... ... .......+.+++.+...+....+..|..|++.|+++.+
T Consensus 294 ~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g 370 (434)
T PRK15075 294 GGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAP--SFA-RMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFS 370 (434)
T ss_pred HHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCC--chH-HHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchhee
Confidence 89999999999987766544332211 111111111 111 11111222233444455556678899999999999888
Q ss_pred HHHH
Q 013991 423 HFWF 426 (432)
Q Consensus 423 ~~~~ 426 (432)
+.+.
T Consensus 371 ~~~~ 374 (434)
T PRK15075 371 LAYS 374 (434)
T ss_pred HHHH
Confidence 7543
No 31
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.97 E-value=8.6e-29 Score=240.80 Aligned_cols=364 Identities=13% Similarity=0.025 Sum_probs=236.6
Q ss_pred chhHHHHHHHHHHhhccccchhhhHHHHHHHh--------cCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCC
Q 013991 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDF--------QIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR 111 (432)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Gr 111 (432)
.+..+...+..+..+++...+.+..|.+.+++ +.+..+ .+++.+++.++..++++++|+++||+||
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~s~~~ig~~~~~~~~G~l~dr~Gr 84 (479)
T PRK10077 11 FSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSL------LGFCVASALIGCIIGGALGGYCSNRFGR 84 (479)
T ss_pred HHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhH------HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34455666778888999999999999998887 667777 9999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhh------------hhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHH
Q 013991 112 KPVIIMGTASVVIFNTLFGLS------------VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTA 178 (432)
Q Consensus 112 r~~l~~~~~~~~~~~~~~~~~------------~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~ 178 (432)
|++++++.+++.++.++++++ +.++.++++|+++|++.|...+. .++++|++|+++|++++++.+.+
T Consensus 85 r~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~ 164 (479)
T PRK10077 85 RDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFA 164 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHH
Confidence 999999999999988887763 23567889999999998888775 99999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhh--HHH
Q 013991 179 WGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVS--YDA 256 (432)
Q Consensus 179 ~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~ 256 (432)
..+|.++++.+++.+.....+. ....++||.++.+.++..++..+..+++||++++...++++++.. .++
T Consensus 165 ~~~G~~~~~~~~~~~~~~~~~~--------~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~ 236 (479)
T PRK10077 165 IIFGQLVVYFVNYFIARSGDAS--------WLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRK 236 (479)
T ss_pred HHHHHHHHHHHHHHHhccCccc--------ccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHH
Confidence 9999999998887765421100 001446677777777776666666677899876532222111111 000
Q ss_pred hhhhhh------hhhhhhccCCCCccccccchhHHHHHHHHHHHHHH----hhhHHHHHHhhhcCCCcCCCcccccchhh
Q 013991 257 LESASA------EVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLH----DMAYSEIFSLWANSPKKLGGLNYSTQMVG 326 (432)
Q Consensus 257 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~s~~~~g 326 (432)
.....+ +..+..+++....+..+... ............+. ......+.|.+..+ .|++....+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~------~g~~~~~~~ 309 (479)
T PRK10077 237 IMGNTLATQALQEIKHSLDHGRKTGGKLLMFG-VGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT------LGASTDIAL 309 (479)
T ss_pred HcCChhHHHHHHHHHHHHHHhhhhhhhhcchh-HHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH------cCCCCchHH
Confidence 000000 00000000000001111100 01111111111111 11112233444332 577777677
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHh-hhhhHHHHHH
Q 013991 327 EVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL-LSVSIITGLF 405 (432)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 405 (432)
......++..+++. ++.+++.||+++|+++..+..+..++.+.+...........+ ......+.+. ......|..+
T Consensus 310 ~~~~~~~~~~~i~~-~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 386 (479)
T PRK10077 310 LQTIIVGVINLTFT-VLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIV--ALLSMLFYVAAFAMSWGPVCW 386 (479)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHH--HHHHHHHHHHHHhccccchhH
Confidence 77777788888887 688999999999999999888888777666543322211111 1111222222 2222347788
Q ss_pred HHHhccccccchhhhhhHHHHH
Q 013991 406 ILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 406 ~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
.+++|..|+++|+++.|.....
T Consensus 387 ~~~~e~~p~~~r~~~~g~~~~~ 408 (479)
T PRK10077 387 VLLSEIFPNAIRGKALAIAVAA 408 (479)
T ss_pred HHhHhhCChhHHHHHHHHHHHH
Confidence 9999999999999999976543
No 32
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.97 E-value=1.4e-28 Score=233.62 Aligned_cols=335 Identities=14% Similarity=0.121 Sum_probs=237.3
Q ss_pred HHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHH
Q 013991 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (432)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 124 (432)
.+.+..+...+......|.+|.+.++++.+..+ .++..+++.+++.++++++|+++||+|||++++.+.+++++
T Consensus 20 ~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~------~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 93 (413)
T PRK15403 20 ALILYDFAAYLTTDLIQPGIINVVRDFNADVSL------APASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTL 93 (413)
T ss_pred HHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHH
Confidence 344556667778889999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCc
Q 013991 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (432)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 203 (432)
+.++++++++++.++++|+++|++.+...+. ..++.|.+|+++|++++++.+....+|..+||.+++.+.+
T Consensus 94 ~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~-------- 165 (413)
T PRK15403 94 ACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMH-------- 165 (413)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------
Confidence 9999999999999999999999987765555 7889999999999999999999999999999999999987
Q ss_pred ccccccccCccchHHHHHHHHHHHHHHHH-HhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccch
Q 013991 204 FSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNW 282 (432)
Q Consensus 204 ~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (432)
.++|+..+++.++..++..+. .+.+||+++.++++.+ .+. ..+.++.++|||
T Consensus 166 --------~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~~~~-~~~------------------~~~~~~~ll~~~ 218 (413)
T PRK15403 166 --------FVHWKVLFAIIAVMGLIAFVGLLLAMPETVKRGAVPFS-AKS------------------VLRDFRNVFRNR 218 (413)
T ss_pred --------hcCHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCCCC-hHH------------------HHHHHHHHHcCH
Confidence 334555557766666554433 4567886542211100 000 012345678999
Q ss_pred hHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHH
Q 013991 283 PLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGV 362 (432)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 362 (432)
.++...+...+.......+....|.++++. +|+++.+.++.......+..+++.....++.|+.++| .......
T Consensus 219 ~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~-----~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~-~~~~~~~ 292 (413)
T PRK15403 219 LFLTGAATLSLSYIPMMSWVAVSPVILIDA-----GGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPR-FIWRAVP 292 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhChHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchh-HHHHHHH
Confidence 999887777777777677777788887765 6899999999888777777777654444444544433 3322222
Q ss_pred HHHHHHHHhhHHHh-hhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHHhh
Q 013991 363 LTIPLLTSYPYIAM-LSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFVKL 429 (432)
Q Consensus 363 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~~~ 429 (432)
+..++..++..... ..+ .+....+...+.+.+.+...|......-. ..+..+|++.+.+.++..
T Consensus 293 ~~~ig~~l~~~~~~~~~~--~~~~~~~~~~l~~~G~~~~~p~~~~~al~-~~~~~~G~a~a~~~~~~~ 357 (413)
T PRK15403 293 IQLVGLALLIVGNLLWPH--VWLWSVLGTSLYAFGIGLIFPTLFRFTLF-SNNLPKGTVSASLNMVIL 357 (413)
T ss_pred HHHHHHHHHHHHHHHccc--cHHHHHHHHHHHHHHHHHHhHHHHHHHhc-cCCCCCcHHHHHHHHHHH
Confidence 22222222221110 111 12223344445555666666666643321 122346888887776653
No 33
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.97 E-value=1.3e-28 Score=233.77 Aligned_cols=324 Identities=17% Similarity=0.099 Sum_probs=229.9
Q ss_pred CchhHHHHHHHHHHhhccccchhhhHHH-HHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHH
Q 013991 39 PITELFSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (432)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~ 117 (432)
.++.+..+.+..++..++..+..+.+|. +.+++|.|+.+ .|++.+++.++..+++++.|+++||+|||+++..
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~------~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~ 86 (399)
T PRK05122 13 LTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFL------AGLVISLQYLATLLSRPHAGRYADTLGPKKAVVF 86 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHH------HHHHHHHHHHHHHHhchhhHhHHhccCCcchHHH
Confidence 3467778888899999999999999986 56889999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhh--------hhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHH
Q 013991 118 GTASVVIFNTLFGLS--------VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPA 188 (432)
Q Consensus 118 ~~~~~~~~~~~~~~~--------~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 188 (432)
+.++.+++.+.+.++ .+++.+++.|+++|++.+...+. .+++.|++|+++|++++++.+.+..+|.++||.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 166 (399)
T PRK05122 87 GLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAP 166 (399)
T ss_pred HHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHH
Confidence 999888876665543 25678999999999998888776 888999999999999999999999999999999
Q ss_pred HHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhh
Q 013991 189 LGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEE 268 (432)
Q Consensus 189 ~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (432)
+++.+.+ ..+|+..+.+.++..++.++.....|++++. ++++ .
T Consensus 167 l~~~l~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~----------------- 209 (399)
T PRK05122 167 LGVLLYH----------------WGGLAGLGLLIMLLALLGLLLARPRPAVPPV---KGER-L----------------- 209 (399)
T ss_pred HHHHHHH----------------cccHHHHHHHHHHHHHHHHHHHhcCCCCCCC---Cccc-h-----------------
Confidence 9999987 3445544455544443333222222222111 0000 0
Q ss_pred ccCCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHH
Q 013991 269 GREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLE 348 (432)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~ 348 (432)
+.++.++ +.+.......+..........+.+.|..+ .|+ ...+...+..+++.++++ ++.+++.
T Consensus 210 -----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~--~~~~~~~~~~~~~~~~~~-~~~g~l~ 273 (399)
T PRK05122 210 -----PFRRVLG--RVWPYGMGLALASIGFGTIATFITLYYAA------RGW--DGAALALTLFGVAFVGAR-LLFGNLI 273 (399)
T ss_pred -----hHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------ccc--ccchHHHHHHHHHHHHHH-HHHHHHH
Confidence 0111111 11111122222233334455566766543 243 234566677777777777 5889999
Q ss_pred HHhChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 349 RILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
||+++++.+..+..+..++...+....+. ....+..++.+++.+..+|.......+..|+++||++.+.++..
T Consensus 274 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 346 (399)
T PRK05122 274 NRLGGLRVAIVSLLVEILGLLLLWLAPSP------WMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVF 346 (399)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHhccH------HHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 99999998888777766666555443221 12334455666666677777777788889999999999988764
No 34
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.97 E-value=1.7e-29 Score=245.70 Aligned_cols=354 Identities=16% Similarity=0.092 Sum_probs=235.4
Q ss_pred HHHHHHHhhccccchhhhHHHHHHHhcCC--------ccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHH
Q 013991 46 IWIIVLCTALPISSLFPFLYFMIKDFQIA--------KREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (432)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--------~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~ 117 (432)
+.+..++..++.....+..+.+..+++.+ ..+ .+++.+++.++..++++++|+++||+|||+++++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~ 106 (481)
T TIGR00879 33 AAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSL------WGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLI 106 (481)
T ss_pred HHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhH------HHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHH
Confidence 44455666777888888888888888777 566 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhh---hhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHH---
Q 013991 118 GTASVVIFNTLFGLS---VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG--- 190 (432)
Q Consensus 118 ~~~~~~~~~~~~~~~---~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--- 190 (432)
+.++..++.+++.+. .+++.+++.|+++|++.+...+. .+++.|++|+++|++++++.+.+..+|..+++.++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~ 186 (481)
T TIGR00879 107 IALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGK 186 (481)
T ss_pred HHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 999999999888554 34568999999999998888775 89999999999999999999999999999999998
Q ss_pred hhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhH--HHh-----------
Q 013991 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSY--DAL----------- 257 (432)
Q Consensus 191 ~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~~----------- 257 (432)
....+ ..+|+.++.+.++..++.++..+++||+++....+++.++... .+.
T Consensus 187 ~~~~~----------------~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (481)
T TIGR00879 187 VSLNN----------------TLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELL 250 (481)
T ss_pred hcCCC----------------CccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHH
Confidence 54444 3455666677666666666666778887653211111111000 000
Q ss_pred h---hhhhhhhhhhccCCCCcccccc------chhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHH
Q 013991 258 E---SASAEVKEEEGREATPKKSLLK------NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEV 328 (432)
Q Consensus 258 ~---~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~ 328 (432)
+ ........+.+.....++..++ .+.++...+..+...........+.|.+..+ .|++..+.+..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~ 324 (481)
T TIGR00879 251 DELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN------AGVSTDHAFLV 324 (481)
T ss_pred HHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH------cCCCchHHHHH
Confidence 0 0000000000000111222222 1222222222222222233344455555443 58888888888
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHHHHHHhhHHHhhhhh-----HHHHHHHHHHHHHHhhhhhHHHH
Q 013991 329 LAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGF-----GLAFLLNCASVVKNLLSVSIITG 403 (432)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 403 (432)
.....++.+++. ++.+++.||+++|+.+..+..+..++++.+......... ..+..+.....+.+.......+.
T Consensus 325 ~~~~~~~~~~~~-~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (481)
T TIGR00879 325 SIIVGAVNFAFT-FVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPV 403 (481)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCe
Confidence 888888888887 588999999999999888877777666665532111110 01122222223333334444566
Q ss_pred HHHHHhccccccchhhhhhHHHHHh
Q 013991 404 LFILQNRAVVRVLTYTLSCHFWFVK 428 (432)
Q Consensus 404 ~~~~~~~~~p~~~~g~~~~~~~~~~ 428 (432)
...+..|..|++.|+++.++.+...
T Consensus 404 ~~~~~~~~~p~~~~~~~~~~~~~~~ 428 (481)
T TIGR00879 404 PWVIVSEIFPLSLRPKGISIAVAAN 428 (481)
T ss_pred ehhhhhccCChHHHHHHHHHHHHHH
Confidence 7778899999999999999887654
No 35
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.97 E-value=2.7e-29 Score=235.72 Aligned_cols=352 Identities=13% Similarity=0.060 Sum_probs=242.1
Q ss_pred HHHHHHHHHHhhccccchhhhHHH-HHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHH
Q 013991 43 LFSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (432)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 121 (432)
++..++..++.........+..|. +.+++|.++.+ .+++.+.+.++..+++++.|+++||+|||+.++++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 76 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQ------LGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLL 76 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHH------hhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH
Confidence 455677777778888888999995 88999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhh-hHHHHHHHHHHHhhhccchhhHHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCC--
Q 013991 122 VVIFNTLFGLSV-NFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE-- 198 (432)
Q Consensus 122 ~~~~~~~~~~~~-~~~~l~~~r~~~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-- 198 (432)
..++.+++++++ +++.+++.|+++|++.+...+..++++|++|+++|++++++.....++|..+++.+++.+.....
T Consensus 77 ~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~ 156 (366)
T TIGR00886 77 LAIPCLWAGLAVQSYSVLLLLRLFIGIAGGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFG 156 (366)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhchhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999 99999999999999876665568899999999999999999998888888888877776654110
Q ss_pred -cCCCcccccccccCccchHHH-HHHHH-HHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCc
Q 013991 199 -KYPNLFSSESLFGKFPYFLPC-LCISL-FAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPK 275 (432)
Q Consensus 199 -~~~~~~gw~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (432)
+.+...+|| ..+ ...++ ..+..++.....+|+++.++++++.... ++.+. .+++.....
T Consensus 157 ~~~~~~~~w~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-------~~~~~~~~~ 218 (366)
T TIGR00886 157 AGLPAHLAWG---------WAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFK--GARWS-------VGTGALGDQ 218 (366)
T ss_pred cccccccccc---------chhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccc--ccccc-------ccchhHHHH
Confidence 001123443 333 22222 2223333444556655432211110000 00000 000011134
Q ss_pred cccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhH
Q 013991 276 KSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM 355 (432)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 355 (432)
++.+++++++...+..++..........+.|.|+++. +|+++.+++.+.....+...+++ ++.+++.||+++|+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~~r~g~~~ 292 (366)
T TIGR00886 219 LKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQ-----FGLSKVTAGAYASLGGLLGSLAR-PLGGAISDRLGGAR 292 (366)
T ss_pred HHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCcHHHHHHHHHHHHHHHHHHh-hccchHHHhhccch
Confidence 5567788887777776666666667778888888765 68899999998888888888887 58899999999988
Q ss_pred HHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 356 VARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
....+......+..++........ ......+.........+...+.......+..| +++|+++|.+..+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~ 361 (366)
T TIGR00886 293 KLLMSFLGVAMGAFLVVLGLVSPL--SLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAI 361 (366)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCcc--hHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHh
Confidence 777666555554444333221100 11111222222222333344456666677766 6889999987754
No 36
>TIGR00895 2A0115 benzoate transport.
Probab=99.97 E-value=5.4e-29 Score=236.32 Aligned_cols=354 Identities=18% Similarity=0.210 Sum_probs=243.1
Q ss_pred chhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHH
Q 013991 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (432)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (432)
++.+....+..+...+......+..|.+.+++|.+..+ .+++.+.+.++..++.++.|+++||+|||+.+..+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~ 89 (398)
T TIGR00895 16 WRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQ------LGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSI 89 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHH------HHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHH
Confidence 34444555666677777777888889999999999988 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCC
Q 013991 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (432)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (432)
++..++.+++.++++++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+.+..+|..++|.+++.+.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--- 166 (398)
T TIGR00895 90 LLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIP--- 166 (398)
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhh---
Confidence 999999999999999999999999999998887775 9999999999999999999999999999999999999987
Q ss_pred cCCCcccccccccCccchHHHHHHHHHHH-HHHHHHhhcccccCCCCCCCcch-hhhHHHhhhhhhhh-----hhhhc--
Q 013991 199 KYPNLFSSESLFGKFPYFLPCLCISLFAF-GVTIAAFWLPETLHRHNDDDDSC-DVSYDALESASAEV-----KEEEG-- 269 (432)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~-- 269 (432)
..||+..+ .+.++..+ ..++...++||+++...+++++. +...++.+...... .+++.
T Consensus 167 ----~~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (398)
T TIGR00895 167 ----VFGWRSLF---------YVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQ 233 (398)
T ss_pred ----cccceeeh---------hhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhcccccccccccccccc
Confidence 45555544 55533333 34444566787754322221111 00001110000000 00000
Q ss_pred cCCCC-ccccccc---hhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHH
Q 013991 270 REATP-KKSLLKN---WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYP 345 (432)
Q Consensus 270 ~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~ 345 (432)
+..+. .+..+++ +..+...+...+..........+.|.+..+ +|+++.+.+.......++..++. ++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~-~~~~ 306 (398)
T TIGR00895 234 GTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVE------LGFSLSLAATGGALFNFGGVIGS-IIFG 306 (398)
T ss_pred chhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 00011 1112222 222233333334444444555566644433 58889999999999999999988 5899
Q ss_pred HHHHHhChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHH
Q 013991 346 FLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFW 425 (432)
Q Consensus 346 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~ 425 (432)
++.||+++++...... +..+...++..... . ........++.+++.+...+...+...+..|++.|+++.|.+.
T Consensus 307 ~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 380 (398)
T TIGR00895 307 WLADRLGPRVTALLLL-LGAVFAVLVGSTLF-S----PTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAI 380 (398)
T ss_pred HHHhhcchHHHHHHHH-HHHHHHHHHHHHhh-C----HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Confidence 9999999884443333 33332222222111 1 1123344556666777788889999999999999999999877
Q ss_pred HHh
Q 013991 426 FVK 428 (432)
Q Consensus 426 ~~~ 428 (432)
...
T Consensus 381 ~~~ 383 (398)
T TIGR00895 381 GIG 383 (398)
T ss_pred HHH
Confidence 653
No 37
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.97 E-value=2.6e-28 Score=229.95 Aligned_cols=321 Identities=14% Similarity=0.118 Sum_probs=235.3
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 120 (432)
+.++.+....++.........+.+|.+.+++|.|..+ .|++.+.+.++..+++++.|+++||+|||+++..+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~------~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~ 79 (381)
T PRK03633 6 RPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQ------VGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASL 79 (381)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 4577778888899999999999999999999999998 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCc
Q 013991 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (432)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 199 (432)
+..+++.+++++++++.++++|+++|++.+...+. .+.+.+..++++|+++++..+.+.++|..+||.+++.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~---- 155 (381)
T PRK03633 80 IFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVST---- 155 (381)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc----
Confidence 99999999999999999999999999998887775 7778888999999999999999999999999999999876
Q ss_pred CCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccc
Q 013991 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLL 279 (432)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (432)
...| ...|+. .........+.....+|+ ..+++ +..+.++.+
T Consensus 156 ---~~~~-----~~~~~~----~~~~~~~~~~~~~~~~~~--~~~~~------------------------~~~~~~~~~ 197 (381)
T PRK03633 156 ---ELMS-----VLPWVT----GLVLAAILPLLFTRILNQ--QAENH------------------------DSTSIWPML 197 (381)
T ss_pred ---cccc-----hHHHHH----HHHHHHHHHHHHhcccCC--CCCCC------------------------CCCCHHHHH
Confidence 1111 112221 111111111111112221 11000 001233456
Q ss_pred cchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHH
Q 013991 280 KNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARI 359 (432)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 359 (432)
|++.++..................++|.|.++ .|.++.+.+.+.+...+..++++ ...+++.||+++++.+..
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~------~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~dr~~~~~~l~~ 270 (381)
T PRK03633 198 KLRQARLGVNGCIISGIVLGSLYGLMPLYLNH------QGMSDASIGFWMALLVSAGILGQ-WPIGRLADRFGRLLVLRV 270 (381)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHH-hhhHHHHHHcCcHHHHHH
Confidence 67766654443444444444556677888765 37888899999999889999998 578999999999998887
Q ss_pred HHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHH
Q 013991 360 AGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFW 425 (432)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~ 425 (432)
+..+..++...+. . .. . ......+.+.......|...+...+..|+++++.+.+.++
T Consensus 271 ~~~~~~~~~~~~~--~-~~--~----~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 327 (381)
T PRK03633 271 QVFVVILGSIAML--S-QA--A----MAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALL 327 (381)
T ss_pred HHHHHHHHHHHHh--h-hH--H----HHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHH
Confidence 7776666544332 1 11 0 1112233344455667888888899998888777666643
No 38
>PRK12382 putative transporter; Provisional
Probab=99.97 E-value=2.3e-28 Score=231.49 Aligned_cols=323 Identities=16% Similarity=0.141 Sum_probs=222.6
Q ss_pred chhHHHHHHHHHHhhccccchhhhHHH-HHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHH
Q 013991 40 ITELFSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (432)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~ 118 (432)
.+.++.+.+..++..+..+...|.+|. +.+++|.|..+ .|++.+++.++..++++++|+++||+|||++++.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~------~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~ 87 (392)
T PRK12382 14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTM------VGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQG 87 (392)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHH------HHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHH
Confidence 345666667777888888888899985 57899999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhh--------hhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHH
Q 013991 119 TASVVIFNTLFGL--------SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPAL 189 (432)
Q Consensus 119 ~~~~~~~~~~~~~--------~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 189 (432)
.+...++.+.+.. .++++.+++.|+++|++.+...+. .+++.|++|+|+|++++++.+.+..+|..+||.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~ 167 (392)
T PRK12382 88 MLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPL 167 (392)
T ss_pred HHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHH
Confidence 8877766543321 358899999999999998877775 8899999999999999999999999999999999
Q ss_pred HhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhc
Q 013991 190 GGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEG 269 (432)
Q Consensus 190 ~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (432)
++.+.+ .++|+..+.+..+..++........||.++++ +++ +
T Consensus 168 ~~~l~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~------------------ 209 (392)
T PRK12382 168 GLLLHS----------------HFGFAALALTTMVLPLLAWAFNGTVRKVPAHA---GER-P------------------ 209 (392)
T ss_pred HHHHHh----------------ccChHHHHHHHHHHHHHHHHHHHhccCCCCCc---ccC-c------------------
Confidence 999987 34455444443333322222222223321110 000 0
Q ss_pred cCCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHH
Q 013991 270 REATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER 349 (432)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~ 349 (432)
+.++..+ .++...+...+..........+.+.|+.+. +++ +.+......+++.++++ +..+++.|
T Consensus 210 ----~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~------~~~--~~~~~~~~~~~~~~~~~-~~~g~l~~ 274 (392)
T PRK12382 210 ----SLWSVVG--LIWKPGLGLALQGVGFAVIGTFVSLYFASK------GWA--MAGFTLTAFGGAFVLMR-VLFGWMPD 274 (392)
T ss_pred ----hHHHHHH--HHHHhHHHHHHHHHHHhHHHHHHHHHHHhc------CCc--hhHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 0001111 111111112222233334445666666542 443 34555666677777777 58899999
Q ss_pred HhChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 350 ILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
|+++++.+..+..+..++..++...... ....+...+.+.+.+...|.......+..|+++||++.|.++..
T Consensus 275 r~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 346 (392)
T PRK12382 275 RFGGVKVAIVSLLVETVGLLLLWLAPTA------WVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAF 346 (392)
T ss_pred hcCCCeehHHHHHHHHHHHHHHHHcccH------HHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 9999998888877777766555443211 12333445555666667778888888999999999999998765
No 39
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.97 E-value=7.1e-29 Score=239.68 Aligned_cols=284 Identities=12% Similarity=0.103 Sum_probs=204.6
Q ss_pred chhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHH
Q 013991 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (432)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (432)
++.+...+...++.........+..|.+.+++|.+.++ .+++.+.+.+++.+++++.|+++||+|||+++..+.
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~------~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~ 108 (476)
T PLN00028 35 MRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSD------IGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLL 108 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHH
Confidence 34455666667777777777888899999999999998 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhHHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCc
Q 013991 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (432)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 199 (432)
++.+++.++++++++++.+++.|++.|++.+...+...+++|++|+++|++++++.+...++|..+++.+.+.+......
T Consensus 109 ~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~ 188 (476)
T PLN00028 109 MLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKD 188 (476)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999998776555567889999999999999999887777877777666554321000
Q ss_pred CCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccc
Q 013991 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLL 279 (432)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (432)
.+.. +..+||..+.+.+++.++..+..++++++++....+ + . ++.. .. ++.+.....++.+
T Consensus 189 ----~~~~---~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~~----~-~----~~~~--~~-~~~~~~~~~~~~~ 249 (476)
T PLN00028 189 ----AGAP---SFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNYR----E-L----KKSG--TM-PKDSFSKVLRYGV 249 (476)
T ss_pred ----cCCc---chhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCchh----h-H----HhcC--cc-ccccHHHHHHHHH
Confidence 0000 012455555777666665444444444332211100 0 0 0000 00 0000011234567
Q ss_pred cchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChh
Q 013991 280 KNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (432)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 354 (432)
++++++...+.++........+..+.|.|+.+. +|++..+++.+.+..+++..+++ +++++++||+++|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~s~~~a~~~~~~~~~~~~ig~-~~~G~lsDr~~~r 318 (476)
T PLN00028 250 TNYRTWILALTYGYSFGVELTMDNIIAEYFYDR-----FGLSLETAGAIAASFGLMNLFAR-PAGGYLSDVAARR 318 (476)
T ss_pred cCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHh
Confidence 788877776666655555556667788887654 68999999999999999999998 5899999998765
No 40
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.97 E-value=1.8e-28 Score=229.72 Aligned_cols=290 Identities=12% Similarity=0.069 Sum_probs=214.1
Q ss_pred CCCchhHHHHHHHHHHhhccccchhhhHHHHHH-HhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHH
Q 013991 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVI 115 (432)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l 115 (432)
+..+|.+...++..++........++..+.+.+ ++|+|++| .+++.+++.+++.++.++.|++.||+|.|+++
T Consensus 30 ~~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q------~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~ 103 (462)
T PRK15034 30 HIARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQ------LFLLTALPSVSGALLRVPYSFMVPIFGGRRWT 103 (462)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH
Confidence 344567778888888888899999999998876 89999999 99999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhh-----hhHHHHHHHHHHHhhhccchhhHHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHH
Q 013991 116 IMGTASVVIFNTLFGLS-----VNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (432)
Q Consensus 116 ~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~~~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 190 (432)
.++.++..+.+++.+++ ++++.+++.|++.|++.+.+.+....+++++|+++||+++|+.....++|..++++++
T Consensus 104 ~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gigg~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~ 183 (462)
T PRK15034 104 VFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVA 183 (462)
T ss_pred HHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHH
Confidence 99999999999999987 8999999999999998554444599999999999999999999766677776665555
Q ss_pred hhhcccCCcCCCccccccccc----CccchHHHHHHHHHHHHHHHHH-hhcccccCCCCCCCcchhhhHHHhhhhhhhhh
Q 013991 191 GFLAQPAEKYPNLFSSESLFG----KFPYFLPCLCISLFAFGVTIAA-FWLPETLHRHNDDDDSCDVSYDALESASAEVK 265 (432)
Q Consensus 191 ~~l~~~~~~~~~~~gw~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (432)
..+.... .-..+||+.... ..+|+....+...+.++..+.. +.+++.++ .+.
T Consensus 184 p~~i~~~--l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~-~~~-------------------- 240 (462)
T PRK15034 184 PLVIFVP--VFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS-SRA-------------------- 240 (462)
T ss_pred HHHHHHH--HHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-ccc--------------------
Confidence 4433100 000345544331 2336666666655555544333 33333221 110
Q ss_pred hhhccCCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHH
Q 013991 266 EEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYP 345 (432)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~ 345 (432)
+.+..+..+|+|..|...+.+++.+..+.++..++|.|.++. + +.........+..+...+.+ +++|
T Consensus 241 -----~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~-----~--~~~~~l~~~~l~~l~~~l~r-plgG 307 (462)
T PRK15034 241 -----SIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQ-----F--PDVNILRLAFFGPFIGAIAR-SVGG 307 (462)
T ss_pred -----CHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----c--ChHHHHHHHHHHHHHHHHHH-HhhH
Confidence 011345678999999999999999989899998999887663 2 22222222333345566666 6999
Q ss_pred HHHHHhChhHHHHHHHHHHHHHH
Q 013991 346 FLERILGPIMVARIAGVLTIPLL 368 (432)
Q Consensus 346 ~l~~~~~~~~~~~~~~~~~~~~~ 368 (432)
+++||+|+++++.++.+...+..
T Consensus 308 ~LADRiG~~~vl~~~~i~~~i~~ 330 (462)
T PRK15034 308 AISDKFGGVRVTLINFIFMAIFS 330 (462)
T ss_pred HHHHhcCchHHHHHHHHHHHHHH
Confidence 99999999999988877665554
No 41
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.97 E-value=7e-29 Score=241.94 Aligned_cols=374 Identities=13% Similarity=0.084 Sum_probs=235.2
Q ss_pred CchhHHHHHHHHHHhhccccchhhhHHHHHHHhc-----CCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChH
Q 013991 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQ-----IAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKP 113 (432)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~ 113 (432)
+++.+....++.+.++++...++...|.+.+++. .+..+ .+++.+.+.++..++++++|+++||+|||+
T Consensus 14 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~ 87 (502)
T TIGR00887 14 HFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSV------SAAVNGSASIGTLAGQLFFGWLADKLGRKR 87 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHH------HHHHHHHHHHHHHHHHHHHHHHHHhhccHH
Confidence 3344556777888899999888888887776531 22333 789999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhh------HHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHH
Q 013991 114 VIIMGTASVVIFNTLFGLSVN------FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIG 186 (432)
Q Consensus 114 ~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 186 (432)
++.++.++..++.++++++++ ++.++++|+++|++.|...+. ..+++|++|+++|++++++.+....+|..++
T Consensus 88 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g 167 (502)
T TIGR00887 88 VYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAG 167 (502)
T ss_pred HHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999888765 789999999999998887775 9999999999999999999999999999999
Q ss_pred HHHHhhhcccCCcCC-Ccc-----ccccc-ccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhh
Q 013991 187 PALGGFLAQPAEKYP-NLF-----SSESL-FGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALES 259 (432)
Q Consensus 187 ~~~~~~l~~~~~~~~-~~~-----gw~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 259 (432)
+.++..+.....+.. ..- .++.. ...++||.++.+.++..++.++..+++||+|++...+++++++..+..++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~ 247 (502)
T TIGR00887 168 AIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSA 247 (502)
T ss_pred HHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHH
Confidence 999887653111000 000 00000 01357888888888887777777788999999743322221111011100
Q ss_pred h-----hhhhhh------hhccCCCCccccccc---hhHHHHHH----HHHHHHHHhhhHHHHHHhhhcCCCcCCCcccc
Q 013991 260 A-----SAEVKE------EEGREATPKKSLLKN---WPLMSSII----VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYS 321 (432)
Q Consensus 260 ~-----~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s 321 (432)
. +++.++ +++.....+++++++ ++.+...+ ..+...+...+...+.|.++.+ .|++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~------~G~~ 321 (502)
T TIGR00887 248 VLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA------IGYS 321 (502)
T ss_pred HhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH------HcCC
Confidence 0 000000 000011235555542 12211111 1222222223333334544432 3554
Q ss_pred cchhhH------------HHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHH
Q 013991 322 TQMVGE------------VLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCA 389 (432)
Q Consensus 322 ~~~~g~------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (432)
..+.+. ......++.+++. ++.+++.||+|||+++..+..+..+++.++............ ....
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~-~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~ 398 (502)
T TIGR00887 322 PPAATNNAYEELYKTAVGNLIIALAGTVPGY-WVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGF--LAIY 398 (502)
T ss_pred CCccchhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHH--HHHH
Confidence 432211 1222233444454 588999999999999888877766665555443211110111 1111
Q ss_pred HHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 390 SVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
.....++..+..+..+.+.+|..|++.|+++.|+.+.+
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~ 436 (502)
T TIGR00887 399 VLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAAS 436 (502)
T ss_pred HHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHH
Confidence 11111223334556777889999999999999987754
No 42
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.97 E-value=2e-28 Score=230.80 Aligned_cols=325 Identities=19% Similarity=0.209 Sum_probs=231.4
Q ss_pred ccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhh
Q 013991 55 LPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN 134 (432)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~ 134 (432)
+......|.+|.+.+++|.++.+ .+++.+++.++..++.++.|+++||+|||+++..+.++.+++.+++.++++
T Consensus 5 ~~~~~~~p~~~~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~ 78 (377)
T PRK11102 5 LAIDMYLPALPVIAADFGVSAGS------VQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQT 78 (377)
T ss_pred hHHHHHhccHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHcc
Confidence 44566779999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCc
Q 013991 135 FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKF 213 (432)
Q Consensus 135 ~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~ 213 (432)
++.+++.|++.|++.+...+. .+++.|++|+++|++++++.+....+|..++|.+++.+.+ .+
T Consensus 79 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~----------------~~ 142 (377)
T PRK11102 79 IDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLV----------------WF 142 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------Hc
Confidence 999999999999988887775 8999999999999999999999999999999999999987 34
Q ss_pred cchHHHHHHHHHHHHH-HHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHH
Q 013991 214 PYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYC 292 (432)
Q Consensus 214 ~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (432)
+|+.++.+.++..++. ++..+.+||+++++++++.+.+. .....++.++++.++...+...
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~ 204 (377)
T PRK11102 143 SWHAIFWVLALAAILAAALVFFFIPETLPKERRQPFHLRT------------------TIRNFASLFRHKRVLGYMLASG 204 (377)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCccCcccccCCCChHH------------------HHHHHHHHHcChHHHHHHHHHH
Confidence 4555556666555553 33445677754332111100000 0012345677777766555544
Q ss_pred HHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHHHHHHhh
Q 013991 293 VFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYP 372 (432)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (432)
+.......+....|.++.+. +|+++.+.|.......+...+++ ++.+++.||+++|+.+..+..+..+..+.+.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~-----~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~ 278 (377)
T PRK11102 205 FSFAGMFSFLTAGPFVYIEL-----NGVSPQNFGYYFALNIVFLFVMT-IINSRFVRRVGALNMLRFGLWIQFIMGIWLV 278 (377)
T ss_pred HHHHHHHHHHHcCHHHHHHH-----hCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444445555443 68899999999999999998888 5889999999999988887765444322222
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHHh
Q 013991 373 YIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFVK 428 (432)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~~ 428 (432)
.....+. ..+. ..+.............+.......+..| +.+|++.+.+...+
T Consensus 279 ~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~ 331 (377)
T PRK11102 279 VSALLDL-GFWA-LVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLR 331 (377)
T ss_pred HHHHHhh-hHHH-HHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHH
Confidence 2211111 1111 1122222222333334444555666666 78888888876654
No 43
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.97 E-value=3.2e-28 Score=229.34 Aligned_cols=279 Identities=17% Similarity=0.238 Sum_probs=215.9
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 120 (432)
+.++.+....++.........+.+|.+.+|+|.+..+ .|+..+.+.++..+++++.|+++||+|||+++.++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 76 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPA------AGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVA 76 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHH------HhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHH
Confidence 4566677788888888888999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCc
Q 013991 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (432)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 199 (432)
+.+++.++++++++++.+++.|++.|++.+...+. ..++.|++|+++|++++++...+..+|..++|.+++.+.+
T Consensus 77 ~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~---- 152 (382)
T PRK10091 77 LCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ---- 152 (382)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh----
Confidence 99999999999999999999999999998887765 8889999999999999999999999999999999999987
Q ss_pred CCCcccccccccCccchHHHHHHHHHHHHHH-HHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCcccc
Q 013991 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 278 (432)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (432)
.+| ||..+.+.++..++.. ...+.+||.+++.+ .+ . . ...+.
T Consensus 153 ---~~g---------wr~~f~~~~~~~~~~~~~~~~~lp~~~~~~~--~~-~--~--------------------~~~~~ 195 (382)
T PRK10091 153 ---EFS---------WRYTFLLIAVFNIAVLASIYFWVPDIRDEAK--GG-L--R--------------------EQFHF 195 (382)
T ss_pred ---hcc---------HHHHHHHHHHHHHHHHHHHHHhCCCCCcccc--cC-H--H--------------------HHHHH
Confidence 344 4555566666554433 33455777532111 00 0 0 00123
Q ss_pred ccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHH
Q 013991 279 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (432)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 358 (432)
+|++..+.......+..........+.+.++.+. +|+++.+.+.+.+..+++..+++ ++.+++.||+++++...
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~s~~~~~~~~~~~~~~~~ig~-~~~g~l~~r~~~~~~~~ 269 (382)
T PRK10091 196 LRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFI-----SGFSETSMTFIMMLVGLGMVLGN-LLSGRLSGRYSPLRIAA 269 (382)
T ss_pred hcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHh-HHHheeccccCchhHHH
Confidence 4556555544433333333333334445555443 68899999999999999999998 58899999999999888
Q ss_pred HHHHHHHHHHHHhh
Q 013991 359 IAGVLTIPLLTSYP 372 (432)
Q Consensus 359 ~~~~~~~~~~~~~~ 372 (432)
.+..+..++.+++.
T Consensus 270 ~~~~~~~i~~~~~~ 283 (382)
T PRK10091 270 VTDFIIVLALLMLF 283 (382)
T ss_pred HHHHHHHHHHHHHH
Confidence 87777666655443
No 44
>PRK11043 putative transporter; Provisional
Probab=99.97 E-value=7.1e-28 Score=228.84 Aligned_cols=333 Identities=17% Similarity=0.136 Sum_probs=242.4
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHH
Q 013991 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (432)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 122 (432)
+....+...+..+..+.+.|.+|.+.+++|.++++ .++..+++.++..++++++|+++||+|||+.+..+.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 81 (401)
T PRK11043 8 LVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASA------VSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLF 81 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHH------HHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHH
Confidence 34444456666677788889999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCC
Q 013991 123 VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (432)
Q Consensus 123 ~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 201 (432)
.++.+++.++++++.+++.|+++|++.+...+. .+++.|++|+++|++..+.......+|..++|.+++++.+
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~------ 155 (401)
T PRK11043 82 ALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLN------ 155 (401)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------
Confidence 999999999999999999999999987776665 8889999999999999999998999999999999999987
Q ss_pred CcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccc
Q 013991 202 NLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKN 281 (432)
Q Consensus 202 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (432)
.++|+..+.+.++..++..+..++++|++++++++ + ++...++.+|+
T Consensus 156 ----------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--------------------~~~~~~~~~~~ 202 (401)
T PRK11043 156 ----------HFGWQAIFATLFAITLLLILPTLRLKPSKKARKQS---Q--------------------DALTFKQLLKS 202 (401)
T ss_pred ----------cCChHHHHHHHHHHHHHHHHHHHHcCCCCCccccc---h--------------------HHHHHHHHHcC
Confidence 34455555666666655544445555543221100 0 00134456677
Q ss_pred hhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHH
Q 013991 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 361 (432)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 361 (432)
++++...+...+.......+..+.|.+.++ +|+++.+.|.......++..+++ ...+++.||+++++......
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~------~g~s~~~~g~~~~~~~~~~~~g~-~~~~~l~~r~~~~~~~~~~~ 275 (401)
T PRK11043 203 KTYLGNVLIFAACSAAFFAWLTGSPFILEQ------MGYSPADIGLSYVPQTIAFLVGG-YGCRAALQKWGGEQLLPWLL 275 (401)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhHHHHHH------cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCHHHHHHHHH
Confidence 776655555444444445556667776654 58899999988887777888887 57889999999888766655
Q ss_pred HHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHHhh
Q 013991 362 VLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFVKL 429 (432)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~~~ 429 (432)
....+....+.......... +....+...+.+.+.+..+|.......+..| +++|++.+.++.+..
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~ 341 (401)
T PRK11043 276 VLFAVSVIAIWLASLLSHPS-LVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQL 341 (401)
T ss_pred HHHHHHHHHHHHHHHhccCc-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHH
Confidence 54444433322221111111 1223333444555666777777777777666 478999999887654
No 45
>PRK03699 putative transporter; Provisional
Probab=99.97 E-value=8.3e-28 Score=227.53 Aligned_cols=327 Identities=13% Similarity=0.148 Sum_probs=237.1
Q ss_pred chhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHH
Q 013991 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (432)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (432)
++..+...+..++.........+.+|.+.+++|.|.++ .+++.+.+.+++.+++++.|++.||+|||+++..+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~------~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~ 79 (394)
T PRK03699 6 IKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSS------MSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGF 79 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 34455666777778787888889999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCC
Q 013991 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (432)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (432)
++.+++.++++++++++.+++.|+++|++.+...+. .+++.|.+|+++|++.++..+....+|..++|.+.+.+.+.
T Consensus 80 ~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-- 157 (394)
T PRK03699 80 ALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLAR-- 157 (394)
T ss_pred HHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence 999999999999999999999999999988876664 88999999999999999999899999999999998887641
Q ss_pred cCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCcccc
Q 013991 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 278 (432)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (432)
..+||.++.+.++..++..+..++ ++.|+.++++++ ++ ++ ..+.
T Consensus 158 -------------~~gw~~~f~~~~~~~~~~~~~~~~-~~~p~~~~~~~~-~~----------------~~----~~~~- 201 (394)
T PRK03699 158 -------------SIEWYWVYACIGLVYVAIFILTLF-SEFPALGKHAPK-AD----------------KP----VAKE- 201 (394)
T ss_pred -------------cccHHHHHHHHHHHHHHHHHHHHh-cCCccccccCcc-cc----------------Cc----cccc-
Confidence 234555556666555443333332 222211111000 00 00 0011
Q ss_pred ccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHH
Q 013991 279 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (432)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 358 (432)
..++.++...+..++.......+..+.|.|+++. +|+++.+.+.+.+...++..+++ ++.+++.||+++|+.+.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~s~~~~~~~~~~~~~~~~ig~-~~~g~l~dr~~~~~~l~ 275 (394)
T PRK03699 202 KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKK-----FGMSLEDAGNLVSNFWMAYMVGM-WIFSFIVRFFDLQRILT 275 (394)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCChHHhhHHHHHHHHHHHHHH-HHHHHHHHHhchhhHHH
Confidence 1235555555666666666677788899998665 68999999999999999999998 58999999999999887
Q ss_pred HHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhH
Q 013991 359 IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCH 423 (432)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~ 423 (432)
....+..+.+.++....+.. ...+..+..+++.+..++...+...+..|++ +++..+.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~g~ 333 (394)
T PRK03699 276 VLAGLALVLMYLFVNTDDPS------HLLYAILGLGFFSSAIYTTIITLGSQQTKVA-SPKLVNF 333 (394)
T ss_pred HHHHHHHHHHHHHHHcCCch------HHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-CHHHHHH
Confidence 76666555444443222111 1223344455556666777777777766644 3444443
No 46
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.97 E-value=1.7e-28 Score=236.17 Aligned_cols=346 Identities=10% Similarity=0.006 Sum_probs=226.2
Q ss_pred HHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHH
Q 013991 47 WIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFN 126 (432)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 126 (432)
.+......+.........|++.++ |.+..+ .++..+.+.++..+++++.|+++||+|||++++++.++.+++.
T Consensus 35 ~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~------~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~ 107 (452)
T PRK11273 35 FFGYAAYYLVRKNFALAMPYLVEQ-GFSRGD------LGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVM 107 (452)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHc-CCCHHH------HHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHH
Confidence 334444444545566777888887 999998 9999999999999999999999999999999999999999999
Q ss_pred HHHhhhh----hHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHH-HHHHHHhhhcccCCcC
Q 013991 127 TLFGLSV----NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLI-IGPALGGFLAQPAEKY 200 (432)
Q Consensus 127 ~~~~~~~----~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~~~~~l~~~~~~~ 200 (432)
+++++++ +++.+++.|++.|++.+...+. ...+.|++|+++|++++++.+.+.++|.. .+|+++..+..
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~----- 182 (452)
T PRK11273 108 LFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAW----- 182 (452)
T ss_pred HHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH-----
Confidence 8888753 6888999999999988877664 77889999999999999999999998864 45655443332
Q ss_pred CCcccccccccCccchHHHHHHHHHHHH-HHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCC-cccc
Q 013991 201 PNLFSSESLFGKFPYFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP-KKSL 278 (432)
Q Consensus 201 ~~~~gw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 278 (432)
..+|+..+++.+++.++ .++..+++||+++....+++ ++.. ++..+..++.++++.+.... .+..
T Consensus 183 -----------~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (452)
T PRK11273 183 -----------FNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPI-EEYK-NDYPDDYNEKHEQELTAKQIFMQYV 249 (452)
T ss_pred -----------hccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCCh-hhhh-hccccccccccCCCccHHHHHHHHH
Confidence 12355555666655544 44555677877654211111 0000 00000000000000000000 1236
Q ss_pred ccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHh--ChhHH
Q 013991 279 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL--GPIMV 356 (432)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~ 356 (432)
+|++.++...+..++..........++|.|+++. .|++..+++....+..++.+++. ++.++++||+ +|++.
T Consensus 250 ~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~-----~g~s~~~~~~~~~~~~~~~~~g~-~~~G~l~dr~~~~r~~~ 323 (452)
T PRK11273 250 LPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEV-----KHFALDKSSWAYFLYEYAGIPGT-LLCGWMSDKVFRGNRGA 323 (452)
T ss_pred HcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHccCCcch
Confidence 7888888887877777777777888999999875 57888889988888888888887 5899999998 44433
Q ss_pred HH-HHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 357 AR-IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 357 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
.. ....+..++...+.... ... .+ ...+.....+.......+....+..+..|++.||+++|.+.+.
T Consensus 324 ~~~~~~~l~~~~~~~~~~~~-~~~--~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~ 391 (452)
T PRK11273 324 TGVFFMTLVTIATIVYWLNP-AGN--PT-VDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLF 391 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhc-ccC--hH-HHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHH
Confidence 22 22222222222221111 111 11 1112222222222222333445667899999999999998764
No 47
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.97 E-value=2e-28 Score=233.64 Aligned_cols=333 Identities=13% Similarity=0.064 Sum_probs=241.6
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHH
Q 013991 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (432)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 122 (432)
+..+....++..+......+.+|.+.++++.+..+ .|++.+.+.++..+++++.|+++||+|||+++..+.++.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~ 92 (417)
T PRK10489 19 FRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQ------VGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTC 92 (417)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHH
Confidence 33445556667777778888899999999988888 999999999999999999999999999999999888877
Q ss_pred HHHHHHHhh-----hhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhccc
Q 013991 123 VIFNTLFGL-----SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (432)
Q Consensus 123 ~~~~~~~~~-----~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (432)
+++.+..+. .++++.+++.|++.|++.+...+. .+++.|+.|+++|+++.++.+...++|..+||.+++.+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~- 171 (417)
T PRK10489 93 GLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIA- 171 (417)
T ss_pred HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHH-
Confidence 776655442 567889999999999988777665 8899999999999999999999999999999999999987
Q ss_pred CCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCcc
Q 013991 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 276 (432)
Q Consensus 197 ~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (432)
..| |+..+.+.++..++..+..+.+||++++++++++..+ + .....+
T Consensus 172 ------~~~---------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~--------------~~~~~~ 218 (417)
T PRK10489 172 ------AGG---------VAWNYGLAAAGTFITLLPLLRLPALPPPPQPREHPLR----S--------------LLAGFR 218 (417)
T ss_pred ------HHh---------hHHHHHHHHHHHHHHHHHHHhCCCCCCCCcccccchH----H--------------HHHHHH
Confidence 333 4444455555555555555667765433211110000 0 001233
Q ss_pred ccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHH
Q 013991 277 SLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMV 356 (432)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 356 (432)
..+++|.++...+..++... ..+...++|.|..+. +|.++.+.|.+.+..+++.+++. ++.+++.||.++++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~-----~g~~~~~~g~~~~~~~~g~~ig~-~~~~~l~~~~~~~~~ 291 (417)
T PRK10489 219 FLLASPVVGGIALLGGLLTM-ASAVRVLYPALADEV-----WQMGAAQIGLLYAAVPLGAALGA-LTSGWLAHSARPGLL 291 (417)
T ss_pred HHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhc-----cCCChhHhHHHHHHHHHHHHHHH-HHHHHhhhccCcchH
Confidence 45677776555444433332 345666778887765 68889999999999999998888 588899998777777
Q ss_pred HHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHHh
Q 013991 357 ARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFVK 428 (432)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~~ 428 (432)
+..+..+..++++++...... ....+..++.+++.+...+...++..+..|++.||+++|.+....
T Consensus 292 l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~ 357 (417)
T PRK10489 292 MLLSTLGSFLAVGLFGLMPMW------ILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQN 357 (417)
T ss_pred HHHHHHHHHHHHHHHHccchH------HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 777766666665554433211 123334444555555556677788899999999999999886543
No 48
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.97 E-value=5.9e-28 Score=235.92 Aligned_cols=357 Identities=14% Similarity=0.126 Sum_probs=239.2
Q ss_pred CchhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHH
Q 013991 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (432)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~ 118 (432)
+++.+..+++..++..++.....+..|.+.+++|.++.+ .+++.+.+.++..+++++.|+++||+|||+++.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 91 (496)
T PRK03893 18 QWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQ------AASLISAAFISRWFGGLLLGAMGDRYGRRLAMVIS 91 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 445666788888889999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccC
Q 013991 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (432)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 197 (432)
.++.+++.++++++++++.+++.|++.|++.+...+. ..++.|.+|+++|++++++...+.++|..++|.+++.+.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-- 169 (496)
T PRK03893 92 IVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVP-- 169 (496)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence 9999999999999999999999999999987776665 8999999999999999999999999999999999999987
Q ss_pred CcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchh--hhHHHhhhhhhhhhh---------
Q 013991 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCD--VSYDALESASAEVKE--------- 266 (432)
Q Consensus 198 ~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--------- 266 (432)
.+|| +..+.+.++..++.++....+||++++.++++++.+ ...+.....+.....
T Consensus 170 -----~~~w---------~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (496)
T PRK03893 170 -----VWGW---------RALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAA 235 (496)
T ss_pred -----cCCH---------HHHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHH
Confidence 3444 444455444333333344456665432221111100 000000000000000
Q ss_pred ----hhccCC-CCc-------------------cccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCccccc
Q 013991 267 ----EEGREA-TPK-------------------KSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYST 322 (432)
Q Consensus 267 ----~~~~~~-~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~ 322 (432)
.-.... ..+ ....+.+.........+...........++|.|+++. +|++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~-----~g~~~ 310 (496)
T PRK03893 236 ALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTD-----LGYDP 310 (496)
T ss_pred HHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhh-----cCCCH
Confidence 000000 000 0000001111111111111111223456778888654 68999
Q ss_pred chhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHH
Q 013991 323 QMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIIT 402 (432)
Q Consensus 323 ~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (432)
.+++.+.+...++.++++ ++.+++.||+++++.+..+..+..+..+.+..... . .. .......+..+....+..+
T Consensus 311 ~~~g~~~~~~~~~~~~g~-~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~-~--~~-~~~~~~~~~~~~~~~~~~~ 385 (496)
T PRK03893 311 HTVANVLFFSGFGAAVGC-CVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGG-A--NV-WVLGLLLFFQQMLGQGISG 385 (496)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccc-c--HH-HHHHHHHHHHHHHhcccch
Confidence 999999999999999998 58999999999999887776555544433222211 1 11 1111222222222333345
Q ss_pred HHHHHHhccccccchhhhhhHHHHH
Q 013991 403 GLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 403 ~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
.....+.+..|+++||++++.++..
T Consensus 386 ~~~~~~~~~~~~~~~g~~~~~~~~~ 410 (496)
T PRK03893 386 LLPKLIGGYFDTEQRAAGLGFTYNV 410 (496)
T ss_pred hhHHHHHhhCCHHHhhcccchhhhh
Confidence 5667888999999999999887654
No 49
>TIGR00898 2A0119 cation transport protein.
Probab=99.97 E-value=1.7e-28 Score=240.18 Aligned_cols=327 Identities=16% Similarity=0.181 Sum_probs=230.9
Q ss_pred hhHHHHHHHhcCC---ccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhHHHH
Q 013991 62 PFLYFMIKDFQIA---KREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMA 138 (432)
Q Consensus 62 ~~~~~~~~~~~~s---~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l 138 (432)
+..|.+.+|++++ ..+ .++..+++.++..+++++.|+++||+|||++++++.++..++.++.+++++++.+
T Consensus 110 ~~~~~i~~e~~l~c~~~~~------~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~ 183 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWK------VDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVF 183 (505)
T ss_pred cccccEEEEecceechHHH------HHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHH
Confidence 5567888999998 666 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccchH
Q 013991 139 VLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFL 217 (432)
Q Consensus 139 ~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~ 217 (432)
++.|++.|++.+...+. .+++.|++|+++|+++.++.+.+..+|.+++|.+++.+.+ ||.
T Consensus 184 ~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~-------------------wr~ 244 (505)
T TIGR00898 184 LVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD-------------------WRW 244 (505)
T ss_pred HHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH-------------------HHH
Confidence 99999999998887775 9999999999999999999999999999999998866542 555
Q ss_pred HHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhH--HHhhhhh---------h---hhhhhhccCCCCccccccchh
Q 013991 218 PCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSY--DALESAS---------A---EVKEEEGREATPKKSLLKNWP 283 (432)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~~~~~~---------~---~~~~~~~~~~~~~~~~~~~~~ 283 (432)
.+.+.++..++..+..+++||++++...+.+.++... ++..+.. . +.++.+++++...++++++|.
T Consensus 245 ~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 324 (505)
T TIGR00898 245 LQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPN 324 (505)
T ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChH
Confidence 5577777766666666789999876543333222111 0000000 0 000001112245678888888
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHH
Q 013991 284 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 363 (432)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 363 (432)
++...+...+..+.........+.+... ++.+.. ......++..+++. ++.+++.||++||+.+.++.++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~---~~~~~~~~~~i~~~-~~~~~l~dr~grr~~~~~~~~~ 394 (505)
T TIGR00898 325 LRKTTLCLMMLWFTTAFSYYGLVLDLGN------LGGNIY---LDLFISGLVELPAK-LITLLLIDRLGRRYTMAASLLL 394 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccc------cCCChH---HHHHHHHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHH
Confidence 8776655544433322222222222221 344432 23334455566665 5788999999999999988888
Q ss_pred HHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 364 TIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
.+++++++.+..... . .......++.+++....++..+.+..|..|++.|+++.|.....
T Consensus 395 ~~~~~l~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~ 454 (505)
T TIGR00898 395 AGVALLLLLFVPVDL---Y-FLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTM 454 (505)
T ss_pred HHHHHHHHHHcCCCc---h-HHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHH
Confidence 777766655543221 1 12223333444455666778889999999999999998887654
No 50
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.97 E-value=1.8e-27 Score=225.17 Aligned_cols=327 Identities=15% Similarity=0.142 Sum_probs=235.7
Q ss_pred HHHHHHHHHhhccccchhhhHH-HHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHH
Q 013991 44 FSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (432)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 122 (432)
..+....++.........|.++ ++.+++|.+..+ .|+..+...++..+.+++.|+++||+|||+++..+.++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~ 86 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVM------VGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMR 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHH------HHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHH
Confidence 3445666667777777778876 567899999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCC
Q 013991 123 VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (432)
Q Consensus 123 ~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 201 (432)
.++.+++.++++++.+++.|+++|++.+...+. .+++.|.+|+|+|++++++.+...++|..+||.+++++.+
T Consensus 87 ~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~------ 160 (400)
T PRK11646 87 AAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ------ 160 (400)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 999999999999999999999999988877776 8999999999999999999999999999999999999873
Q ss_pred CcccccccccCccchHHHHHHHHHHHHHH-HHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCcccccc
Q 013991 202 NLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLK 280 (432)
Q Consensus 202 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (432)
+| |+..+.+.++..++.. +..+..||.++. +.+ .+ .....++.++
T Consensus 161 --~g---------~~~~f~~~~~~~~~~~i~~~~~~~~~~~~---~~~-~~-------------------~~~~~~~~~~ 206 (400)
T PRK11646 161 --YD---------FRLVCATGAVLFVLAAAFNAWLLPAYKLS---TVR-TP-------------------VREGMTRVLR 206 (400)
T ss_pred --hh---------HHHHHHHHHHHHHHHHHHHHHhCCccccc---ccc-hh-------------------hHHHHHHHHc
Confidence 23 4444466555544432 333445542111 000 00 0012445677
Q ss_pred chhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHH
Q 013991 281 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 360 (432)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 360 (432)
+++++...+..+...........+.|.|.++. +.++.+.+.+.+..++....+..+..++..||.+.++....+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~------~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 280 (400)
T PRK11646 207 DKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDI------AGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAG 280 (400)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhhhhhHHhh------cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Confidence 77776655544444433333445677777653 346778888888877776666555666666777766666666
Q ss_pred HHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHHh
Q 013991 361 GVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFVK 428 (432)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~~ 428 (432)
..+..++...++...... ...+...+.+.+.....|...++..+.+|+++||++.|.+.+..
T Consensus 281 ~~~~~~~~~~l~~~~~~~------~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~ 342 (400)
T PRK11646 281 LLIMSLSMFPIGMVSNLQ------QLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGL 342 (400)
T ss_pred HHHHHHHHHHHHHhhhHH------HHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHH
Confidence 666666655554333211 12222333444555667888899999999999999999887654
No 51
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.96 E-value=2e-27 Score=226.44 Aligned_cols=340 Identities=19% Similarity=0.286 Sum_probs=235.4
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 120 (432)
+....+++..++..+......+.+|.+.+++|.+..+. ...+.|++.+++.++..+++++.|+++||+|||+++..+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 92 (408)
T PRK09874 14 RNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSA-LNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSAL 92 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchh-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHH
Confidence 34556677888888888889999999999999887541 01225889999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhHHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcC
Q 013991 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY 200 (432)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~ 200 (432)
+.+++.+++..+++++.+++.|++.|++.+.......++.|.+|+++|++++++.+....+|..++|.+++.+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~----- 167 (408)
T PRK09874 93 GMGIVMVLMGLAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLAD----- 167 (408)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 999999999999999999999999999766544447888999999999999999999999999999999999987
Q ss_pred CCcccccccccCccchHHHHHHHHHHHHHH-HHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccc
Q 013991 201 PNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLL 279 (432)
Q Consensus 201 ~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (432)
.+ +|+..+.+.++..++.. +..+++||+++..++++ +.+ . ....+.+
T Consensus 168 --~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~-------------------~~~~~~~ 215 (408)
T PRK09874 168 --SY---------GLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKE-MLH-M-------------------REVVTSL 215 (408)
T ss_pred --Hh---------CHHHHHHHHHHHHHHHHHHHHHHhccCcccccchh-hhH-H-------------------HHHHHhC
Confidence 33 44544466665555433 33455666432211100 000 0 0112234
Q ss_pred cchhHHHHH-HHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHH
Q 013991 280 KNWPLMSSI-IVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (432)
Q Consensus 280 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 358 (432)
++++++... ...............+++.|..+... +.+......+.+....+++..++. +..+++.||+++++.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~l~~~~~~-~~~g~l~dr~g~~~~~~ 292 (408)
T PRK09874 216 KNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAG--NVSNIAFISGMIASVPGVAALLSA-PRLGKLGDRIGPEKILI 292 (408)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhccccchhHH
Confidence 555544422 22333333334445566666554210 001011234555666667777776 57899999999999988
Q ss_pred HHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 359 IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
.+.....+..+........ ....+...+.+++.+...|...+...+..|++.+|+..+.+...
T Consensus 293 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 355 (408)
T PRK09874 293 TALIFSVLLLIPMSFVQTP------LQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSF 355 (408)
T ss_pred HHHHHHHHHHHHHHHhccH------HHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHH
Confidence 8877666555544333211 12334445556677777888888888999999999998877654
No 52
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.2e-29 Score=228.18 Aligned_cols=351 Identities=17% Similarity=0.097 Sum_probs=242.8
Q ss_pred CCCCchhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHH
Q 013991 36 SGLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVI 115 (432)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l 115 (432)
.+.+++.+..+++..+++.++.+.+....+.+++.+|++++. .|++.+.+.+.+.+++|++|+++|||+||+++
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~------~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~ 101 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSE------LGLLQTVFIVVFMIASPLFGYLADRYNRKRVI 101 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchh------ccchhHHHHHHHHHHHHHHHHHHhhcCcceEE
Confidence 445567788899999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhc
Q 013991 116 IMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (432)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (432)
.+|..++.++.++++++..+|++.++|.+.|+|.+.+.++ +++++|.+|.++|++.+++++.+..+|..+|.+.+..+.
T Consensus 102 ~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va 181 (493)
T KOG1330|consen 102 AVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVA 181 (493)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeec
Confidence 9999999999999999999999999999999999999886 999999999999999999999999999999999999998
Q ss_pred ccCCcCCCccc-ccccccCccchHHHHHHHHHHHH-HHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCC
Q 013991 195 QPAEKYPNLFS-SESLFGKFPYFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREA 272 (432)
Q Consensus 195 ~~~~~~~~~~g-w~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (432)
+ ..+ ||+.| ...+++.++ .++..++.+|+.+..+++.+.+... ........
T Consensus 182 ~-------~~~~Wr~af---------~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~-----------~~~~ts~~ 234 (493)
T KOG1330|consen 182 S-------LTFWWRWAF---------RGSAVLGVIVGLLVFLFVREPERGARDEVDGENKM-----------VKPFTSVW 234 (493)
T ss_pred c-------CccceEEEE---------EeehHHHHHHHHHHHhhccCcccccccccccCCcC-----------CCCccchH
Confidence 7 333 44444 445555555 4445566777655433222211100 00001112
Q ss_pred CCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhC
Q 013991 273 TPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG 352 (432)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 352 (432)
++.+.+.|++.+....+.+....+...++.-+.|.+.+..+.. .|++..+.-.+..+...++.+|. +.++.++||+.
T Consensus 235 kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~--~~~~~~~~~ifg~vt~~~G~lGv-l~Ggiisd~~~ 311 (493)
T KOG1330|consen 235 KDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYEL--IGFDHNATLIFGGVTCAGGSLGV-LFGGIISDKLS 311 (493)
T ss_pred HHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHH--hCCccccchhhhhHHHhhchhhh-eehHHHHHHHH
Confidence 2334455556666666666666666666666666655443322 34566666666666667777776 57788888742
Q ss_pred ----hhHHHH-------HHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHH-HHHHHHhccccccchhhh
Q 013991 353 ----PIMVAR-------IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIIT-GLFILQNRAVVRVLTYTL 420 (432)
Q Consensus 353 ----~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~g~~ 420 (432)
+..... .+..+++..+.+.+......- ......++.+.......+ ...-+..+++|++.|.++
T Consensus 312 ~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~-----~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a 386 (493)
T KOG1330|consen 312 RIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSM-----IFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTA 386 (493)
T ss_pred HhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHH-----HHHHHHHHHHHHHHhcccccccceeeEecCcccccHH
Confidence 211112 222222333333332222121 111122222222222222 233456788999999999
Q ss_pred hhHHHHH
Q 013991 421 SCHFWFV 427 (432)
Q Consensus 421 ~~~~~~~ 427 (432)
++.-...
T Consensus 387 ~a~~~~~ 393 (493)
T KOG1330|consen 387 YALDTVF 393 (493)
T ss_pred HHHHHHH
Confidence 8876543
No 53
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.96 E-value=2e-27 Score=228.39 Aligned_cols=353 Identities=13% Similarity=0.038 Sum_probs=237.6
Q ss_pred chhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHH
Q 013991 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (432)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (432)
|..+....+...........+....|.+.+++|.+.++ .+++.+.+.++..++.++.|+++||+|||++++.+.
T Consensus 18 w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~------~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~ 91 (455)
T TIGR00892 18 WVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSE------TAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGG 91 (455)
T ss_pred hHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhH------HHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhH
Confidence 43444444444444444456777889999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhHHHHHH-HHHHHhhhccchhh-HHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccC
Q 013991 120 ASVVIFNTLFGLSVNFWMAVL-TRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (432)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~-~r~~~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 197 (432)
++..+++++++++++++.+++ .|++.|++.+...+ ..+++.++++ ++|+++.++.+.+..+|..++|.+++.+.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~-- 168 (455)
T TIGR00892 92 LLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFE-- 168 (455)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHH--
Confidence 999999999999999998875 56899998876544 4778888885 789999999999999999999999999987
Q ss_pred CcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhc-ccccCCCCCCCc-chhhhHHHhhhhhhhhhhhhccCCCCc
Q 013991 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL-PETLHRHNDDDD-SCDVSYDALESASAEVKEEEGREATPK 275 (432)
Q Consensus 198 ~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (432)
.++|+.++.+.+++.++..+..+++ ++.+.++..+.+ +++...+...+..+.....++..+...
T Consensus 169 --------------~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (455)
T TIGR00892 169 --------------SFGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLD 234 (455)
T ss_pred --------------HhChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcc
Confidence 3345555577766655443333333 322111000000 000000000000000000000011112
Q ss_pred cccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHH--hCh
Q 013991 276 KSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI--LGP 353 (432)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~--~~~ 353 (432)
.+++++|+++......++..........+++.|..+ .|++..+++.+.++.+++.++++ ++.+++.|| .++
T Consensus 235 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~------~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~d~~~~~~ 307 (455)
T TIGR00892 235 FSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD------KGVDEYEAAFLLSIIGFVDIFAR-PSCGLIAGLKWIRP 307 (455)
T ss_pred hHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHhcccccCH
Confidence 357788888877777776666666666777877754 48899999999999999998887 588888886 333
Q ss_pred hHHHHHHH--HHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHHh
Q 013991 354 IMVARIAG--VLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFVK 428 (432)
Q Consensus 354 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~~ 428 (432)
++...++. ....+..++...... ...+.+..++.+++.+...+...+++.+.+|+++++++.|.+....
T Consensus 308 ~~~~~~~~~~~~~~l~~ll~~~~~~------~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 378 (455)
T TIGR00892 308 HVQYLFSFALLFNGLTHLLCALAGD------YTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVE 378 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhch------HHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHH
Confidence 43333322 222222222222211 1123444555566777777888899999999999999999887653
No 54
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.96 E-value=3.3e-27 Score=223.69 Aligned_cols=335 Identities=15% Similarity=0.177 Sum_probs=235.5
Q ss_pred CchhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHH
Q 013991 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (432)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~ 118 (432)
+++.++......++..+......|.+|.+.+++|.++.+ .++..+.+.++..+++++.|+++||+|||+++.++
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~ 79 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGA------VQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVG 79 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHH
Confidence 456666666666677777788889999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccC
Q 013991 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (432)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 197 (432)
..+..++.+++..+++++.+++.|++.|++.+...+. ..+..|.+++++|+++.+..+.+..+|..++|.+++.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~-- 157 (394)
T PRK11652 80 MSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTT-- 157 (394)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 9999999999999999999999999999988877665 7888999999999999999999999999999999999987
Q ss_pred CcCCCcccccccccCccchHHHHHHHHHHHH-HHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCcc
Q 013991 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 276 (432)
Q Consensus 198 ~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (432)
..+|+.++.+.++..++ .++..++.||+++.++++. + . ....+
T Consensus 158 --------------~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~------------------~~~~~ 201 (394)
T PRK11652 158 --------------LFGWRACYLFLLLLGAGVTFSMARWMPETRPADARRT---R-V------------------LASYR 201 (394)
T ss_pred --------------ccChHHHHHHHHHHHHHHHHHHHHhCCccCccccchh---H-H------------------HHHHH
Confidence 34455555666555444 3334456677543221110 0 0 01234
Q ss_pred ccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHH
Q 013991 277 SLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMV 356 (432)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 356 (432)
+.++++.++...+..+........+....+.+..+. +|+++.+.+.......++..+++ .+.+++.||.+++..
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~g~-~~~~~l~~~~~~~~~ 275 (394)
T PRK11652 202 TLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAV-----LGLSSMTVSILFILPIPAAFFGA-WFAGRPNKRFSTLMW 275 (394)
T ss_pred HHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 456677766554444443333334444455555544 68888899998888777777777 578888888873332
Q ss_pred HHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 357 ARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
...................... .. ........+.+++.+...|.......+..| +++|++.+++...
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~ 342 (394)
T PRK11652 276 QSVICCLLAGLLMWIPGWFGVM--NV-WTLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGL 342 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhccc--cH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHH
Confidence 2222211111111111111011 11 123334455566667778888888888887 4678888777643
No 55
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.96 E-value=4.4e-27 Score=221.52 Aligned_cols=323 Identities=14% Similarity=0.123 Sum_probs=226.0
Q ss_pred HHHHHhhccccchhhhHHH-HHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHH-HHHHHHHH
Q 013991 48 IIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM-GTASVVIF 125 (432)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~-~~~~~~~~ 125 (432)
+..++..++.....|.+|. +.+++|.+..+ .|++.+++.+...+.+++.|+++||+||||.++. +.++..++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~ 77 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAM------IGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALA 77 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHH
Confidence 4466777778888898885 56789999999 9999999999999999999999999999887654 56666777
Q ss_pred HHHHhhhhhHHHHHHHHHHHhhhccchhhH-Hhhhhhhcccchhhhh--hhhHHHHHHHHHHHHHHHHhhhcccCCcCCC
Q 013991 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALG--LSTVSTAWGIGLIIGPALGGFLAQPAEKYPN 202 (432)
Q Consensus 126 ~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~--~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~ 202 (432)
.++++++++++.+++.|++.|.+.+...|. .++..|..|+++|++. .+....+.++|.++||.+++.+.+
T Consensus 78 ~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~------- 150 (375)
T TIGR00899 78 CLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLAL------- 150 (375)
T ss_pred HHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHH-------
Confidence 788889999999999999998876666665 7888898888777754 577788889999999999999987
Q ss_pred cccccccccCccchHHHHHHHHHHHHHHH-HHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccc
Q 013991 203 LFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKN 281 (432)
Q Consensus 203 ~~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (432)
.++|+.++.+.++..++..+ ..+++||.+++.+++++ ..+.++.+++
T Consensus 151 ---------~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~ 198 (375)
T TIGR00899 151 ---------GFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGALT-----------------------RLEVRGLLAS 198 (375)
T ss_pred ---------hcccHHHHHHHHHHHHHHHHHHHHhCCCcccCcccccC-----------------------cchhhhhhcC
Confidence 44556666777766555443 34557876543221100 0011224556
Q ss_pred hhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHH
Q 013991 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 361 (432)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 361 (432)
++++......++...........+|.|+.+. +|.++.+.+.+.........++. ++.+++.||+++|+.+.++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~g~~~~~~~~~~~~~~-~~~g~l~~r~g~~~~~~~~~ 272 (375)
T TIGR00899 199 RDTRLLFVACTLMWGCNILYIINMPLLIIHE-----LGLPDKLAGLMMGTAAGLEIPFM-LLAGYLIKRFGKRRLMLLAA 272 (375)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhhHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHH-HhHHHHHHHhcchhHHHHHH
Confidence 6665554444444443444555667776554 68888889988877666666666 58899999999999887766
Q ss_pred HHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHHh
Q 013991 362 VLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFVK 428 (432)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~~ 428 (432)
....+.+..+..... .+ .......+.+++.+...+.......+..|++ ++++.+.++...
T Consensus 273 ~~~~~~~~~~~~~~~-----~~-~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 332 (375)
T TIGR00899 273 LAGVAFYTGLAADNS-----LW-ALLMLQLLNAIFIGILAGIGMLYFQDLMPGR-AGAATTLYTNTG 332 (375)
T ss_pred HHHHHHHHHHHHHHH-----HH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-hhHHHHHHHHHH
Confidence 654444433322211 11 2223334445555566677777888887764 568888876543
No 56
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.96 E-value=1e-27 Score=231.99 Aligned_cols=283 Identities=13% Similarity=0.139 Sum_probs=214.1
Q ss_pred chhHHHHHHHHHHhhccccchhhhHHHHHH----------------------HhcCCccccchhhhhhHHHHHHhHHHHH
Q 013991 40 ITELFSIWIIVLCTALPISSLFPFLYFMIK----------------------DFQIAKREEDIGSYAGYVGSSFMFGRAL 97 (432)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~s~~~~~~~~~~~~~~s~~~~~~~~ 97 (432)
+.....+++...+++.++...+...+.+.+ |++.+..+ .|++.+.+.+++.+
T Consensus 18 ~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~------~g~~~s~~~~~~~~ 91 (465)
T TIGR00894 18 LFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGAL------QGLILSSHFYGQII 91 (465)
T ss_pred HHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHH------hhHHHHHHHHHHHH
Confidence 334446666677777777766666665554 67888887 99999999999999
Q ss_pred HHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhh--hhHHHHHHHHHHHhhhccchhhH-Hhhhhhhcccchhhhhhhh
Q 013991 98 TSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS--VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLST 174 (432)
Q Consensus 98 ~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~ 174 (432)
++++.|+++||+|||+++.++.++.+++.+++.++ .+++.+++.|+++|++.+...+. ..+++|++|+++|++++++
T Consensus 92 ~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 171 (465)
T TIGR00894 92 IQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGM 171 (465)
T ss_pred HHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHH
Confidence 99999999999999999999999999988887554 45788999999999999988886 8999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCCcCCCc-ccccccccCccchHHHHHHHHHHHHHHHHHh-hcccccCCCCCCCcchhh
Q 013991 175 VSTAWGIGLIIGPALGGFLAQPAEKYPNL-FSSESLFGKFPYFLPCLCISLFAFGVTIAAF-WLPETLHRHNDDDDSCDV 252 (432)
Q Consensus 175 ~~~~~~~g~~~g~~~~~~l~~~~~~~~~~-~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~ 252 (432)
...+..+|.+++|.+++.+.+ . .|||.. +++.++..++..+..+ +.+|+|+.++...++++
T Consensus 172 ~~~~~~~g~~i~~~l~~~l~~-------~~~gw~~~---------f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~- 234 (465)
T TIGR00894 172 STSGFQLGTFIFLPISGWLCE-------SWGGWPMI---------FYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEK- 234 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-------ccCCCCee---------hhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHH-
Confidence 999999999999999999987 3 255444 4666666655444443 44555543222111111
Q ss_pred hHHHhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHH
Q 013991 253 SYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAIT 332 (432)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~ 332 (432)
+..++..+ .++.+.+.+..++++++++.++...+..+........+..++|.|+.+. +|++..+.|...+..
T Consensus 235 --~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~-----~g~s~~~~g~~~~~~ 306 (465)
T TIGR00894 235 --KYINSSLQ-GQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWV-----LRVSGKENGLLSSLP 306 (465)
T ss_pred --HHHHhhcc-cccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCcChHHhHHHHHHH
Confidence 11111000 0000111234577889999999998888888888888888999998775 688999999999998
Q ss_pred HHHHHHHHHHhHHHHHHHhChh
Q 013991 333 GFSLLVFQLSLYPFLERILGPI 354 (432)
Q Consensus 333 ~~~~~~~~~~~~~~l~~~~~~~ 354 (432)
.++..++. ++.+++.||..+|
T Consensus 307 ~~~~~i~~-~~~g~l~d~~~~~ 327 (465)
T TIGR00894 307 YLFAWLCS-IFAGYLADFLKSS 327 (465)
T ss_pred HHHHHHHH-HHHHHHHHHHHHc
Confidence 99998887 5899999987543
No 57
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.96 E-value=7.6e-27 Score=221.49 Aligned_cols=340 Identities=12% Similarity=0.116 Sum_probs=230.2
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 120 (432)
|.+....++.++.........+.++.+.+++|.++.+ .|++.+.+.++..+++++.|+++||+|||+++..+.+
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~ 86 (402)
T TIGR00897 13 LNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQ------SASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLL 86 (402)
T ss_pred chhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHH------hHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 4566677777777777777777788788999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHh---h-hhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHH-HHHHHHHhhhc
Q 013991 121 SVVIFNTLFG---L-SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGL-IIGPALGGFLA 194 (432)
Q Consensus 121 ~~~~~~~~~~---~-~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~~~~~l~ 194 (432)
+.+++.+++. . .++++.+++.|++.|++.+...+. .+.+.|.+|+++|++++|+.+.+.++|. .++|.+++.+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~ 166 (402)
T TIGR00897 87 LWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAI 166 (402)
T ss_pred HHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9988876553 3 357888999999999987766554 7788899999999999999999999997 68999999888
Q ss_pred ccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCC
Q 013991 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP 274 (432)
Q Consensus 195 ~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (432)
+ .+||+..+ |+..+.. .+..++..+..++.++.++++ ++.+ . + +....
T Consensus 167 ~-------~~g~~~~~----~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~-~-~--------------~~~~~ 214 (402)
T TIGR00897 167 P-------AFGEMNTL----WSALAFV----LTGGVIALFSNKDIFTPQHMQ-TREK-F-S--------------ELGKA 214 (402)
T ss_pred c-------ccchHHHH----HHHHHHH----HHHHHHHHhccCCCCCccccc-CCcc-h-h--------------hHHHH
Confidence 7 45543322 3322211 111222233344332111110 0000 0 0 00112
Q ss_pred ccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChh
Q 013991 275 KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (432)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 354 (432)
.+.++|+|+++...+..++......+...+.|.|.++ +|++..+.+.+.+...++..+++ +..+++.||+++|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~------~g~s~~~~~~~~~~~~~~~~ig~-~~~g~l~dr~~~~ 287 (402)
T TIGR00897 215 ATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE------LGFSTSEWLQIWGTFFFTNIVFN-VIFGIVGDKLGWM 287 (402)
T ss_pred HHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHhhcch
Confidence 3457888988887777777666777778888988754 58889999998888889999998 5889999999988
Q ss_pred HHHH-HHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHHh
Q 013991 355 MVAR-IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFVK 428 (432)
Q Consensus 355 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~~ 428 (432)
+... .+.+...+....+........... ....+...+.+.+.....+. .....+. ++++||++.|+++...
T Consensus 288 ~~~~~~~~l~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~G~~~~~~~~~-~~~~~~~-~~~~~g~~~g~~~~~~ 359 (402)
T TIGR00897 288 NTVRWFGGVGCGIFTLALYYIPQHFGHSF-AVALIIAIALGIFLAGYVPL-AAVFPTL-APKHKGAAMSVLNLSA 359 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHccCCcH-HHHHHHHHHHHHHHHHHHHH-HHHHHhh-CcchhHHHHHHHHHHH
Confidence 7654 222222332222222211100011 11222333334444444443 4455565 4568999999887654
No 58
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.96 E-value=8.3e-27 Score=220.63 Aligned_cols=344 Identities=11% Similarity=0.051 Sum_probs=246.5
Q ss_pred hHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHH
Q 013991 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (432)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 121 (432)
.+..+....++.++..+...+..|.+++++|.++.+ .|++.+.+.+++.+++++.|++.||+|||+.+.++.++
T Consensus 4 ~~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~------~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l 77 (410)
T TIGR00885 4 PFALITSLFALWGFANDITNPMVPQFQQAFTLTAFQ------AALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFL 77 (410)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH
Confidence 355666777778888888899999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh---hhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccC
Q 013991 122 VVIFNTLFGL---SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (432)
Q Consensus 122 ~~~~~~~~~~---~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 197 (432)
.+++.+++.. .++++.+++.|++.|+|.|...+. .+++.+..|+++|++.+++.+...++|..+||.+++.+....
T Consensus 78 ~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~ 157 (410)
T TIGR00885 78 YALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSN 157 (410)
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999888654 358999999999999999988775 899999999999999999999999999999999999886421
Q ss_pred CcC-CCccccccc---------ccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhh
Q 013991 198 EKY-PNLFSSESL---------FGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEE 267 (432)
Q Consensus 198 ~~~-~~~~gw~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (432)
.+. ....-+... -...+|+.++.+.+++.++..+...+.++++.++++ +++ +
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~~~-~~~-~---------------- 219 (410)
T TIGR00885 158 LPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNHSD-AKQ-I---------------- 219 (410)
T ss_pred CccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc-ccc-c----------------
Confidence 000 000000000 002357887777777655543333222221111100 000 0
Q ss_pred hccCCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHH
Q 013991 268 EGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFL 347 (432)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l 347 (432)
+.....++++|+|.++...+..+++...+.+..++++.|..+.. .+.+....+...+.......+++ ++++++
T Consensus 220 --~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~----~~~~~~~a~~~~~~~~~~~~vGR-~~~~~l 292 (410)
T TIGR00885 220 --SFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLI----PGMTAGFAANYNIGAMVIFFISR-FIGTWL 292 (410)
T ss_pred --cchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 00112345678888888777777777777777788888875421 23344444545555556677887 589999
Q ss_pred HHHhChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhH
Q 013991 348 ERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCH 423 (432)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~ 423 (432)
.||+++++.+.+......+.+++........ ......+.+++.+..+|..++...+..+++.+..+.++
T Consensus 293 ~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~-------~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l 361 (410)
T TIGR00885 293 ISYLAAHKVLMAYAIIGMALCLGSIFAGGHV-------GLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGL 361 (410)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-------HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHH
Confidence 9999999998888777777666665433211 23334445567778889999999999988876544443
No 59
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.96 E-value=2.5e-27 Score=220.89 Aligned_cols=345 Identities=19% Similarity=0.190 Sum_probs=246.4
Q ss_pred HHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhh---hhhHHHHHHHHHH
Q 013991 68 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL---SVNFWMAVLTRFL 144 (432)
Q Consensus 68 ~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~r~~ 144 (432)
.+.+|.+.++.+.....+.+++++.+|.++|++..|+++||+|||..+.++.++..++.+++.+ .+++.+++++|++
T Consensus 46 ~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i 125 (485)
T KOG0569|consen 46 IERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLI 125 (485)
T ss_pred HHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 4556766666677788999999999999999999999999999999999999888888877766 4688999999999
Q ss_pred HhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccchHHHHHHH
Q 013991 145 LGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCIS 223 (432)
Q Consensus 145 ~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~ 223 (432)
.|+..|..... ..++.|..|++.||......+.+..+|..+|..++.-- .+|. ...|.+.+....
T Consensus 126 ~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~---------ilGt-----~~~W~~l~~~~~ 191 (485)
T KOG0569|consen 126 VGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPS---------LLGT-----EDLWPYLLAFPL 191 (485)
T ss_pred HHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHH---------hcCC-----CcchHHHHHHHH
Confidence 99988887665 99999999999999999999999999988886665321 2222 334666667777
Q ss_pred HHHHHHHHHHhhcccccCCCCC-CCcchhhhH------------HHhhhhhhhhhhhh--ccCCCCccccccchhHHHHH
Q 013991 224 LFAFGVTIAAFWLPETLHRHND-DDDSCDVSY------------DALESASAEVKEEE--GREATPKKSLLKNWPLMSSI 288 (432)
Q Consensus 224 ~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~~~------------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 288 (432)
+++++.++...++||+|++.-. +++++++.+ ++.++..++.++++ +++..+.+++++++..+...
T Consensus 192 i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~ 271 (485)
T KOG0569|consen 192 IPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPL 271 (485)
T ss_pred HHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHH
Confidence 7778888888999999998654 333333321 11111111111111 22556788999998777754
Q ss_pred HHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHHHH
Q 013991 289 IVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLL 368 (432)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 368 (432)
...+...+.+ .+....+.+.+......+.|++..++-+.....++...+.+ +++.++.||.|||++++.+..++.+..
T Consensus 272 ~i~~~v~~~q-q~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t-~~~~~lid~~gRRpLll~~~~~~~~~~ 349 (485)
T KOG0569|consen 272 LIGIVVSFAQ-QFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLST-LVSPFLIDRLGRRPLLLISLSLMAVAL 349 (485)
T ss_pred HHHHHHHHHH-HhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCcHHHHHHHHHHHHHH
Confidence 4333333221 11112222222222333368999999999999999999998 599999999999999999988887776
Q ss_pred HHhhHHHhhhhhH---H-HHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHHh
Q 013991 369 TSYPYIAMLSGFG---L-AFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFVK 428 (432)
Q Consensus 369 ~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~~ 428 (432)
+++.......... . +..+.........+..+..|..+.+.+|.+|++.|.++...-..++
T Consensus 350 ~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~ 413 (485)
T KOG0569|consen 350 LLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVN 413 (485)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHH
Confidence 6655443333222 2 2223344444555667778999999999999999998877665543
No 60
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.96 E-value=9.7e-27 Score=219.24 Aligned_cols=324 Identities=13% Similarity=0.088 Sum_probs=241.6
Q ss_pred HHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHH----HHHH
Q 013991 44 FSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVI----IMGT 119 (432)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l----~~~~ 119 (432)
..+....+..........|.+|.+.+++|.|..+ +|++.+++.+...++++++|+++||+|||... .++.
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~------ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 80 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWLKGIGLGEEM------IGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALAS 80 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 3355667777777888999999999999999999 99999999999999999999999999985433 2222
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCC
Q 013991 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (432)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (432)
.+..+ ..+..+++++.+++.|+++|.+.+...|. .++..|. +++|++..+......++|.+++|.+++.+.+
T Consensus 81 ~l~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~--- 153 (382)
T TIGR00902 81 AIFAA--AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIG--- 153 (382)
T ss_pred HHHHH--HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHH---
Confidence 22222 24446789999999999999877666665 6666553 5788999999999999999999999999998
Q ss_pred cCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCcccc
Q 013991 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSL 278 (432)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (432)
.+||| ..+.+.....++.+ ..+.++|+++++++++++ +.+..+..+++
T Consensus 154 ----~~g~~---------~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~ 201 (382)
T TIGR00902 154 ----MFDEQ---------NILAILTAGLAFML-IGFLIKPTIPPKDAIPED------------------ESQGDSAFIAL 201 (382)
T ss_pred ----HcChh---------HHHHHHHHHHHHHH-HHHHcCCCCCCCcccccc------------------ccccchhHHHH
Confidence 44554 44455443322222 223334332111111000 00111235678
Q ss_pred ccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHH
Q 013991 279 LKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVAR 358 (432)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 358 (432)
+|+|+++...+..++.......+..+.|.|.++ .|.++.++|.+.+...+..++.. ...+++.||++.++.+.
T Consensus 202 l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~------~g~s~~~~g~l~~~~~~~~i~~~-~~~~~l~~r~g~~~~l~ 274 (382)
T TIGR00902 202 LKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA------AGISASATGLLWGIGVLAEIIIF-AFSNKLFQNCSARDLLL 274 (382)
T ss_pred HcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------CCCCHhHHHHHHHHHHHHHHHHH-HHhHHHHhhCCHHHHHH
Confidence 899999988888888888888888899988865 58999999999998777777775 68899999999999999
Q ss_pred HHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHH
Q 013991 359 IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWF 426 (432)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~ 426 (432)
++.+...+....+++..+.. .+.....+.++..+...+....++++. |++++++..+.++.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~------~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~ 335 (382)
T TIGR00902 275 ISAIACVGRWAIIGAIEAFP------LIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNA 335 (382)
T ss_pred HHHHHHHHHHHHHHhHhhHH------HHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHH
Confidence 99988888877776544332 455567777888888888889999988 99999988888753
No 61
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.96 E-value=8.9e-27 Score=220.64 Aligned_cols=283 Identities=20% Similarity=0.218 Sum_probs=214.9
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHH
Q 013991 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (432)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 122 (432)
+.......+....+.....+.+|.+.+++|.++.+ .++..+.+.++..+++++.|+++||+|||+.+..+.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~------~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~ 78 (392)
T PRK10473 5 LLCSFALVLLYPAGIDMYLVGLPRIAADLNASEAQ------LHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALF 78 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHH
Confidence 33455566666777777788999999999999998 999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCC
Q 013991 123 VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (432)
Q Consensus 123 ~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 201 (432)
.++.+++..+++++.+++.|+++|++.+...+. .+++.|.+|+++|++.+++.+....+|..++|.+++.+.+
T Consensus 79 ~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~------ 152 (392)
T PRK10473 79 IIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIML------ 152 (392)
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------
Confidence 999999999999999999999999998877665 9999999999999999999999999999999999998876
Q ss_pred CcccccccccCccchHHHHHHHHHHHHH-HHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCcccccc
Q 013991 202 NLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLK 280 (432)
Q Consensus 202 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (432)
..+|+..+.+.++..++. ++..+.+||+++.+++++ .+. .+..++.++
T Consensus 153 ----------~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~-------------------~~~~~~~~~ 201 (392)
T PRK10473 153 ----------KFPWQSLFYTMAAMGILVLLLSLFILKETRPARAPAA--SSK-------------------PRENSESLL 201 (392)
T ss_pred ----------CcChHHHHHHHHHHHHHHHHHHHHHcCCCCCcccCCc--cch-------------------HHHHHHHHh
Confidence 334455446665555443 334456677643321110 000 011224466
Q ss_pred chhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHH
Q 013991 281 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 360 (432)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 360 (432)
+++++...+...+.......+..+.|.+..+. +|+++.+.+.+....+++..++. ++.+++.||+++|+.+..+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~i~~~-~~~~~l~~r~g~~~~~~~~ 275 (392)
T PRK10473 202 NRFFLSRLVITTLSVTVILTFVNTSPVLLMEQ-----MGFSRGEYAIIMALTAGVSMTVS-FSTPFALGIFKPRTLMLTS 275 (392)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHH
Confidence 67665544444333333334444555555443 68888899999999999998888 5889999999999998888
Q ss_pred HHHHHHHHHHhhHH
Q 013991 361 GVLTIPLLTSYPYI 374 (432)
Q Consensus 361 ~~~~~~~~~~~~~~ 374 (432)
..+..++...+...
T Consensus 276 ~~~~~~~~~~~~~~ 289 (392)
T PRK10473 276 QVLFLAAGITLALS 289 (392)
T ss_pred HHHHHHHHHHHHHH
Confidence 77776666555443
No 62
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.96 E-value=9.8e-28 Score=230.08 Aligned_cols=354 Identities=12% Similarity=0.011 Sum_probs=229.1
Q ss_pred hHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHH
Q 013991 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (432)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 121 (432)
.++...+................|.+.+ +|.++++ .+++.+++.++..+++++.|+++||+|||+++.++.++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~------~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~ 100 (438)
T TIGR00712 28 VFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGE------LGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLIL 100 (438)
T ss_pred HHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhH------hHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHH
Confidence 3444455556666666666677777765 6999998 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh----hhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhccc
Q 013991 122 VVIFNTLFGLS----VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (432)
Q Consensus 122 ~~~~~~~~~~~----~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (432)
.+++.++++.. ++++.+.+.|++.|++.+...+. ...+.|++|+++|++++++.+.+.++|..++|.+.+.+.+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~ 180 (438)
T TIGR00712 101 SAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAW 180 (438)
T ss_pred HHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHH
Confidence 99988887664 46778889999999998877664 88899999999999999999999999999998887765430
Q ss_pred CCcCCCcccccccccCccchHHHHHHHHHHHH-HHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCC-CC
Q 013991 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREA-TP 274 (432)
Q Consensus 197 ~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 274 (432)
..+|+..+++.++..++ .++..+++||+++..+.++.++... +..++..+ +.+.+.+.+ ..
T Consensus 181 ---------------~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~ 243 (438)
T TIGR00712 181 ---------------FNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRN-DYPDDYNE-KAEQELTAKEIF 243 (438)
T ss_pred ---------------hhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhccc-cccccccc-ccccccchHHHH
Confidence 22455555776666555 3444566777654321111000000 00000000 000000000 01
Q ss_pred ccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChh
Q 013991 275 KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (432)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 354 (432)
.+..+|++.++...+...+......+...+.|.|+++. .|+++.+++....+..+.+++++ ++.+++.||++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~g~s~~~~~~~~~~~~~~~~ig~-~~~g~l~dr~~~~ 317 (438)
T TIGR00712 244 MQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEV-----KHFALDKSSWAYFLYEYAGIPGT-LLCGWMSDKVFKG 317 (438)
T ss_pred HHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHc-----cCCChhhHHHHHHHHHHHHHHHH-HHHHHHHHHhccC
Confidence 12367888888877766666666667778899998875 68899999999999888888888 5899999998543
Q ss_pred HHHHHHHHHHHHHHH-HhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 355 MVARIAGVLTIPLLT-SYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 355 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
+....+......... ...+...... ..+. .....+..+....+..........+..|++.||++.|.++..
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 389 (438)
T TIGR00712 318 NRGATGVFFMTLVTIAVIVYWMNPAG-NPLV-DMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLF 389 (438)
T ss_pred cccHHHHHHHHHHHHHHHHHHhcCCC-chHH-HHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchH
Confidence 322222222111111 1111111000 0111 111222222222222222234567889999999999988765
No 63
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.96 E-value=5.7e-28 Score=215.87 Aligned_cols=292 Identities=14% Similarity=0.131 Sum_probs=240.7
Q ss_pred CCCchhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHH
Q 013991 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (432)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~ 116 (432)
+.++++++.-.+...+......+..+..+.+.+++|+|++| .+++.++..+...+..++.|.+.||+|.|++..
T Consensus 10 ~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q------~~ll~aiPil~GallRl~~g~l~drfGgR~~~~ 83 (417)
T COG2223 10 RIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQ------KGLLVAIPILVGALLRLPYGFLTDRFGGRKWTI 83 (417)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHH------HHHHHHHHHHHhHHHHHHHHhhhcccCchHHHH
Confidence 34557777778888888888899999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhh---HHHHHHHHHHHhhhccchhhHHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhh
Q 013991 117 MGTASVVIFNTLFGLSVN---FWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (432)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~---~~~l~~~r~~~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 193 (432)
++.++..+-++..+++.+ ++++++.+++.|++++.+....+++++++|||++|.++|+.. ..++|..+...++..+
T Consensus 84 ~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v 162 (417)
T COG2223 84 LSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLV 162 (417)
T ss_pred HHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHH
Confidence 999999999999998764 459999999999999999888999999999999999999999 8889998888888888
Q ss_pred cccCCcCCCcccccccccCccchHHHHHHHHHHHH-HHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCC
Q 013991 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREA 272 (432)
Q Consensus 194 ~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (432)
.. .+|+. .|+....+.....++ .++.++.+.|.+..+...++.. +
T Consensus 163 ~~-------~~g~~------~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~---------------------~ 208 (417)
T COG2223 163 AV-------AFGFL------AWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL---------------------P 208 (417)
T ss_pred HH-------HHhhH------HHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc---------------------h
Confidence 87 34410 144444444444444 4444555665554322211110 0
Q ss_pred CCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhC
Q 013991 273 TPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG 352 (432)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 352 (432)
...+.+++++..|...+.|+.....+.++..++|.|++++ ++.++.++|.........+.+.+ +.+|+++||+|
T Consensus 209 ~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~-----fg~~~~~Ag~~a~~f~~~g~l~R-p~GG~LsDR~G 282 (417)
T COG2223 209 AQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQ-----FGLSPVTAGLIAFLFPLIGALAR-PLGGWLSDRIG 282 (417)
T ss_pred hHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCChhhHHHHHHHHHHHHHHHH-hccchhhhhcc
Confidence 2355678899999999999999999999999999999998 89999999999999999999998 79999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHH
Q 013991 353 PIMVARIAGVLTIPLLTSYPYIA 375 (432)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~ 375 (432)
.+|.+......+.++.....+..
T Consensus 283 g~rv~~~~f~~~~~~~~~l~~~~ 305 (417)
T COG2223 283 GRRVTLAVFVGMALAAALLSLFL 305 (417)
T ss_pred chhHHHHHHHHHHHHHHHHHccc
Confidence 99998888888777766655443
No 64
>PRK10054 putative transporter; Provisional
Probab=99.96 E-value=6.2e-27 Score=221.12 Aligned_cols=331 Identities=14% Similarity=0.164 Sum_probs=241.1
Q ss_pred hhHHHHHHHHHHhhccccchhhhHH-HHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (432)
|.++.+.+..++...+.....+.+| ++.+++|.+..+ .|++.+.+.++..+++++.|+++||+|||++++++.
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~------~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~ 80 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDL------IGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAI 80 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHH
Confidence 4466666778888888888888887 455789999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCC
Q 013991 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (432)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (432)
++..++.++.+++++++.+++.|.+.|.+.+...+. .++..|..|+++|++++++.+...++|.++||.+++++.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~--- 157 (395)
T PRK10054 81 TAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM--- 157 (395)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 999999999999999999999998888776666665 8899999999999999999999999999999999998864
Q ss_pred cCCCcccccccccCccchHHHHHHHHHHHHHH-HHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccc
Q 013991 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKS 277 (432)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (432)
.||+ .++...++..++.+ +..+.+||+++++++++ +. ....++
T Consensus 158 -----~g~~---------~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~---~~-------------------~~~~~~ 201 (395)
T PRK10054 158 -----QSIN---------LPFWLAAICSAFPLVFIQIWVQRSEKAIATET---GS-------------------VWSPSV 201 (395)
T ss_pred -----hccC---------cHHHHHHHHHHHHHHHHHHHHhccccccccch---hh-------------------hhhhhh
Confidence 2444 44465555555443 33344565433211100 00 011245
Q ss_pred cccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHH
Q 013991 278 LLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVA 357 (432)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 357 (432)
.+|+|+++...+..++..+....+..+.+.|.... .+.+.+....+..+....+.....+ +..+++.||.++|+.+
T Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~l 277 (395)
T PRK10054 202 LLQDKALLWFTCSGFLASFVSGAFASCISQYVMVV---ADSDFAEKVVAVVLPVNAAMVVSLQ-YSVGRRLNAANIRPLM 277 (395)
T ss_pred hccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHh---cccchHHHHHHHHHHhhhhheeeeh-hHHHHHHccCCchhHH
Confidence 67888887777666665555555544555555332 1246677777888777777666665 4667788899999888
Q ss_pred HHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHH
Q 013991 358 RIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFW 425 (432)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~ 425 (432)
..+..+..++...+..... + . ....+...+.+.+.....|.....+.+..|++.++++.+...
T Consensus 278 ~~~~~~~~~~~~~~~~~~~--~--~-~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~ 340 (395)
T PRK10054 278 TAGTLCFVIGLVGFIFSGN--S--L-LLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS 340 (395)
T ss_pred HHHHHHHHHHHHHHHHcch--H--H-HHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH
Confidence 8887776666655543211 1 1 122334455566666667888889999999999998877543
No 65
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.96 E-value=9e-27 Score=217.10 Aligned_cols=306 Identities=23% Similarity=0.327 Sum_probs=255.6
Q ss_pred HHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHH
Q 013991 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (432)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 124 (432)
.+....+...++.....+..|.+.+++|.+..+ .++..+...++..+++++.|+++||+|||+.+.++.++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~ 76 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQ------AGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFAL 76 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHH
Confidence 345567778888888999999999999999998 99999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCc
Q 013991 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (432)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 203 (432)
+.+.+.++++++.+++.|++.|++.+...+. .+++.|++|+|+|++.+++.+...++|..++|.+++.+.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------- 148 (352)
T cd06174 77 GSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAE-------- 148 (352)
T ss_pred HHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHH--------
Confidence 9999999999999999999999998888776 9999999999999999999999999999999999999987
Q ss_pred ccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccchh
Q 013991 204 FSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWP 283 (432)
Q Consensus 204 ~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (432)
..+|+..+.+.++..++..+...+++ |.
T Consensus 149 --------~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------~~ 176 (352)
T cd06174 149 --------SLGWRWLFLILAILGLLLALLLLFLL--------------------------------------------RL 176 (352)
T ss_pred --------HhhHHHHHHHHHHHHHHHHHHHHHHH--------------------------------------------HH
Confidence 33455555666666555444444443 34
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhH-HHHHHHH
Q 013991 284 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM-VARIAGV 362 (432)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~ 362 (432)
++...+..++..........+.+.+..+. +|.+..+.+.......++..++. ++.+++.||.++|+ .+..+..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~ 250 (352)
T cd06174 177 LLLLALAFFLLSFGYYGLLTYLPLYLQEV-----LGLSAAEAGLLLSLFGLGGILGA-LLGGLLSDRLGRRRLLLLIGLL 250 (352)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhHHHHHHHH
Confidence 45556666666777777777888887764 58899999999999999999998 58899999999999 8888888
Q ss_pred HHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHHh
Q 013991 363 LTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFVK 428 (432)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~~ 428 (432)
+..++......... .....+...+.+++.+...+....+..+..|+++|++..+......
T Consensus 251 ~~~i~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (352)
T cd06174 251 LAALGLLLLALAPS------LALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFG 310 (352)
T ss_pred HHHHHHHHHHHhcc------HHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHH
Confidence 87777776655432 2235556667777888888999999999999999999999887654
No 66
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.96 E-value=4.3e-27 Score=222.92 Aligned_cols=333 Identities=14% Similarity=0.086 Sum_probs=227.0
Q ss_pred HHhhccccchhhhHHHHHHHhcC--CccccchhhhhhHHHH-----HHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHH
Q 013991 51 LCTALPISSLFPFLYFMIKDFQI--AKREEDIGSYAGYVGS-----SFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV 123 (432)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~~~~~~~s-----~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 123 (432)
+.+.++...+....+.+.+++.. ++++ .+...+ ...++..+++++.|+++||+|||+++.++.++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~ 76 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPL------VALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMG 76 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChH------HHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHH
Confidence 34566677777777777777543 3333 344333 3344445789999999999999999999999999
Q ss_pred HHHHHHhhhhhHH--------HHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhc
Q 013991 124 IFNTLFGLSVNFW--------MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (432)
Q Consensus 124 ~~~~~~~~~~~~~--------~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (432)
++.++++++++++ .+++.|+++|++.+...+. .+++.|++|+++|++..+..+.+..+|.++++.++..+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~ 156 (394)
T TIGR00883 77 IGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLS 156 (394)
T ss_pred HHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988865 4889999999998887765 999999999999999999999999999999999887765
Q ss_pred ccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCC
Q 013991 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP 274 (432)
Q Consensus 195 ~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (432)
.. .+.... ..++|+.++.+.++..++..+.....||+++.++++++ +++....
T Consensus 157 ~~-------~~~~~~-~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~ 209 (394)
T TIGR00883 157 YL-------LGDDAL-LEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEK-------------------HKKKRGP 209 (394)
T ss_pred Hh-------cCHHHh-hccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhc-------------------cccccCC
Confidence 31 110000 14567777777666555544444455665432111000 0011223
Q ss_pred ccccccchh--HHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhC
Q 013991 275 KKSLLKNWP--LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG 352 (432)
Q Consensus 275 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 352 (432)
.++.+++++ ++......++..........+.|.|.++. +|.++.+.+.......+...++. ++.+++.||++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g 283 (394)
T TIGR00883 210 IRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQT-----LGLSANSALLVLMLSLILFFITI-PLSGALSDRIG 283 (394)
T ss_pred HHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHhc
Confidence 344555544 55555555555566666677888888654 68888999999998888888887 58899999999
Q ss_pred hhHHHHHHHHHHHHHH-HHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHH
Q 013991 353 PIMVARIAGVLTIPLL-TSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFW 425 (432)
Q Consensus 353 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~ 425 (432)
+|+.+.....+..+.. .......... . .........+.+++.+...+...+...|.+|++.|+++.+..+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 354 (394)
T TIGR00883 284 RRPVLIIFTVLAALLAVPLLMALLDSG--S-FTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAY 354 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCC--c-hHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehh
Confidence 9987765544333322 2221111111 1 1123333445555666777888999999999999999888743
No 67
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.96 E-value=3.6e-26 Score=213.66 Aligned_cols=331 Identities=11% Similarity=0.158 Sum_probs=233.9
Q ss_pred cccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhcc-----CChHH-HHHHHHHHHHHHHHH
Q 013991 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-----GRKPV-IIMGTASVVIFNTLF 129 (432)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-----Grr~~-l~~~~~~~~~~~~~~ 129 (432)
......+..|.+.+|+|.|.++ .|+.... .+...+ .+++|+++||+ ||||. ++.+.++.+++....
T Consensus 3 ~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l 74 (356)
T TIGR00901 3 PLGLVGNTLPYWLRSKNVSLKT------IGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLIL 74 (356)
T ss_pred CchhHHhHHHHHHHHcCCCHHH------HHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 3456678889999999999999 9988655 455554 99999999998 89887 466777777776666
Q ss_pred hhh---hhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCccc
Q 013991 130 GLS---VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFS 205 (432)
Q Consensus 130 ~~~---~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~g 205 (432)
++. .+.+.+....++.+++.+...+. .+++.|++|+|+|+++.++...+.++|.++++.+++.+.+ .+|
T Consensus 75 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~-------~~g 147 (356)
T TIGR00901 75 SFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLAS-------PEF 147 (356)
T ss_pred HcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhh-------hcc
Confidence 666 46666777777888877777675 9999999999999999999999999999999999999887 333
Q ss_pred ccccccCccchHHHHHHHHHHHHHHHHHh-hcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccchh-
Q 013991 206 SESLFGKFPYFLPCLCISLFAFGVTIAAF-WLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWP- 283 (432)
Q Consensus 206 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 283 (432)
... +.+++|+.++.+.++..++..+..+ ..||+.+..+. ++ +.. ++ .....+++++++.
T Consensus 148 ~~~-~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~-~~--~~~-~~--------------~~~~~~~~~~~~~~ 208 (356)
T TIGR00901 148 ANT-GLITLWGYIFFWTALLILPGLLVTLFLAKEPQEDASV-PK--PLT-QA--------------VLKPIREFFQRKNM 208 (356)
T ss_pred ccc-ccccccHHHHHHHHHHHHHHHHHHHHhccCCCccccc-ch--hHH-HH--------------HHHHHHHHHHhcCc
Confidence 222 1256688888888877766555544 35664321111 00 000 00 0012334455554
Q ss_pred --HHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHH-HHHHHHHHhHHHHHHHhChhHHHHHH
Q 013991 284 --LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGF-SLLVFQLSLYPFLERILGPIMVARIA 360 (432)
Q Consensus 284 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~ 360 (432)
++...+..++..........+.|.|..+ +|+++.+.+.+....+. ..+++. ++++++.||+++|+.+..+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~g~~~~~~g~~~~~~~~~~~~~g~-~~~g~l~~r~g~~~~l~~~ 281 (356)
T TIGR00901 209 IQALLLLLLIVLYKLGDSAATVLTTLFLLD------MGFSKEEIALVAKINGLLGAILGG-LIGGIIMQPLNILYALLLF 281 (356)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHhHHHHHHHHHHHH-HHHHHHHhhhhHHHHHHHH
Confidence 5555555555666666777788888765 48899999988887774 455665 6899999999999988888
Q ss_pred HHHHHHHHHHhhHHHhhhh-----hHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 361 GVLTIPLLTSYPYIAMLSG-----FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
.++..+....+.+...... ......+....++.+++.+...+...++..+.+|+++||+..|.+..+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~ 353 (356)
T TIGR00901 282 GIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSL 353 (356)
T ss_pred HHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHH
Confidence 7776666554443321110 001123444455567777888999999999999999999999988764
No 68
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.96 E-value=2.5e-26 Score=214.54 Aligned_cols=313 Identities=15% Similarity=0.057 Sum_probs=226.9
Q ss_pred ccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhh
Q 013991 55 LPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN 134 (432)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~ 134 (432)
.......+.+|.+.+++|.+..+ .++..+.+.++..+++++.|+++||+|||+++.++.++..++.+.+ .+++
T Consensus 14 ~~~~~~~~~lp~l~~~~~~s~~~------~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~ 86 (355)
T TIGR00896 14 PALTSVGPLLPQIRSALGMSFSV------AGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPG 86 (355)
T ss_pred CccccCcccHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hhcc
Confidence 34466788999999999999999 9999999999999999999999999999999999998888888877 7788
Q ss_pred HHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCc
Q 013991 135 FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKF 213 (432)
Q Consensus 135 ~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~ 213 (432)
.+.+++.|++.|++.+...+. ..++.|.+| ++|++++++.+...++|..+++.+++.+.+ ..+ .
T Consensus 87 ~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~-------~~~-------~ 151 (355)
T TIGR00896 87 TALLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQ-------HSG-------G 151 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHH-------hhh-------h
Confidence 999999999999988876665 778888886 689999999999999999999999988876 111 1
Q ss_pred cchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHH
Q 013991 214 PYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCV 293 (432)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (432)
+|+..+...++..++. ...++|+.+++++++++ ......++.+|+|.++...+..++
T Consensus 152 ~w~~~f~~~~~~~~~~--~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~ 208 (355)
T TIGR00896 152 HWQQALAWWALPALLA--LLAWIPQVRRRVAANQT---------------------TTRLTPVRIWRSPLAWQVTVFFGL 208 (355)
T ss_pred hHHHHHHHHHHHHHHH--HHHHhhhhccccCCCCC---------------------CCCCCCchhhcCHhHHHHHHHHHH
Confidence 2454445444333222 22334543322111000 011234567788888776666666
Q ss_pred HHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHh-ChhHHHHHHHHHHHHHHHHhh
Q 013991 294 FSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL-GPIMVARIAGVLTIPLLTSYP 372 (432)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~ 372 (432)
..........+.|.|+++ .|++..+.+...+...++.++++ ++.+++.||+ ++|+....+..+..++...+.
T Consensus 209 ~~~~~~~~~~~lp~~~~~------~g~~~~~~g~~~~~~~~~~i~~~-~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 281 (355)
T TIGR00896 209 QSGLYYSLIGWLPAILIS------HGASAATAGSLLALMQLAQAASA-LLIPALARRVKDQRGIVAVLAVLQLVGLCGLL 281 (355)
T ss_pred HHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHH-HhHHHHHhhhccchHHHHHHHHHHHHHHHHHH
Confidence 666666777788888864 48899999999999999999998 5889999999 456666666666666655544
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccc-cccchhhhhhHHHH
Q 013991 373 YIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAV-VRVLTYTLSCHFWF 426 (432)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~g~~~~~~~~ 426 (432)
+..... . .. ...+.+++.+..+|...+...+.. ++++++++.++.+.
T Consensus 282 ~~~~~~---~--~~--~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 329 (355)
T TIGR00896 282 FAPMHG---L--WA--WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQS 329 (355)
T ss_pred HhhhhH---H--HH--HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 432211 1 11 233456666777777666665444 45667887777654
No 69
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.95 E-value=1.1e-25 Score=212.12 Aligned_cols=318 Identities=13% Similarity=0.095 Sum_probs=226.7
Q ss_pred HHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCCh----HHHHHHHHHHHHH
Q 013991 50 VLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRK----PVIIMGTASVVIF 125 (432)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr----~~l~~~~~~~~~~ 125 (432)
.+......+...|.+|.+.+++|.|..+ +|++.+++.++..++++++|+++||+||| +.+.+...+. .
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~------iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~ 84 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPET------IGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--A 84 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHH------HHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--H
Confidence 4445566678889999999999999999 99999999999999999999999999994 3333222222 2
Q ss_pred HHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcc
Q 013991 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLF 204 (432)
Q Consensus 126 ~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~ 204 (432)
......++++|.+++.|++.|++.+...+. .+++.++ +++|++..+......++|.++||.+++++.+
T Consensus 85 ~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~--------- 153 (382)
T PRK11128 85 VAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVS--------- 153 (382)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHH---------
Confidence 233344688999999999999987777775 6676665 4678888999999999999999999999998
Q ss_pred cccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccchhH
Q 013991 205 SSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPL 284 (432)
Q Consensus 205 gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (432)
.++|+.++...++..++..+..+..||.+++.+++++ .++.....++++|+|++
T Consensus 154 -------~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~i~~~~~~ 207 (382)
T PRK11128 154 -------WFGEQAILWILTAGVASMLLGQLLRPTIMPQGESRQQ-------------------ESAGWPAWKALLKEPTV 207 (382)
T ss_pred -------HcChhHHHHHHHHHHHHHHHHHHccCCCCCccccccc-------------------cccccchHHHHHcChhH
Confidence 4445555565554444333333344543221111000 00112356788999999
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHH
Q 013991 285 MSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLT 364 (432)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 364 (432)
+...+..++..........+.|.|..+ .|++..+.|.+.+...+..++.. ++.+++.||+++++.+..+....
T Consensus 208 ~~~~~~~~l~~~~~~~~~~~~~~~~~~------~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~~r~~~~~~l~~~~~~~ 280 (382)
T PRK11128 208 WRFLLCVSLLQGSHAAYYGFSAIYWQA------AGYSASTIGYLWSLGVVAEVLIF-AFSNRLFRRWSARDLLLLSAICG 280 (382)
T ss_pred HHHHHHHHHHHHHhHhHHHHHHHHHHH------CCCCHhHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHH
Confidence 888777777776666777778887754 58899999999998878777776 58889999999999988888877
Q ss_pred HHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHH
Q 013991 365 IPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWF 426 (432)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~ 426 (432)
.+..+.+....+.. ...+..++.++..+...+....+..+. +++++++..+.+..
T Consensus 281 ~~~~~~~~~~~~~~------~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 335 (382)
T PRK11128 281 VVRWGLMGSTTALP------WLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSA 335 (382)
T ss_pred HHHHHHHHhhhhHH------HHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHH
Confidence 77666554433211 234455555666666677777777776 55566887777653
No 70
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.95 E-value=1.3e-24 Score=205.50 Aligned_cols=325 Identities=13% Similarity=0.146 Sum_probs=205.5
Q ss_pred hHHHHHHHHHHhhccccchhhhHHH-HHHHhcCCccccchhhhhhHHHHHHhH-HHHHHHHhhhhhhhccCChHHH-HHH
Q 013991 42 ELFSIWIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYGRKPVI-IMG 118 (432)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~s~~~~-~~~~~~~~~G~l~dr~Grr~~l-~~~ 118 (432)
.....++..++..+......|.+|. +.+++|.+.++ .|++.+...+ +..++.++.|+ +||+||||.+ ..+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~------~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~ 88 (393)
T PRK15011 16 TSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAM------VGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFC 88 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHH
Confidence 3445566678888888888888875 57889999999 9999877655 55555544555 9999999875 455
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-Hhhhhhhcccchhh--hhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQA--LGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~--~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
.++..++..+.+++++++.+++.+.+.|...+...|. .+++.|+.++++|. ...+..+.+.++|.++||.+++.+.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~ 168 (393)
T PRK15011 89 CLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAM 168 (393)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 6666677888888999998876665555444455565 77888877766553 44578888999999999999999988
Q ss_pred cCCcCCCcccccccccCccchHHHHHHHHHHHHHH-HHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCC
Q 013991 196 PAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATP 274 (432)
Q Consensus 196 ~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (432)
..+|+.++...++..++.. +..+.+||.+++++++++ + . ..
T Consensus 169 ----------------~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~-------------------~~ 210 (393)
T PRK15011 169 ----------------GFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLATG--T-L-------------------EA 210 (393)
T ss_pred ----------------hcChHHHHHHHHHHHHHHHHHHHhhcCccCCCCccccc--c-c-------------------cc
Confidence 4455555577766555543 344567776433221100 0 0 00
Q ss_pred ccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChh
Q 013991 275 KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI 354 (432)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 354 (432)
.++ +.+..+...............+..+.|.|+++. +|+++.+.+.+.+...+..+++. ++.+++.||+++|
T Consensus 211 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-----~~~~~~~~g~~~~~~~~~~i~~~-~~~G~l~dr~g~~ 282 (393)
T PRK15011 211 PRR--NRRDTLLLFVICTLMWGTNSLYIINMPLFIINE-----LHLPEKLAGVMMGTAAGLEIPTM-LIAGYFAKRLGKR 282 (393)
T ss_pred ccc--ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhChH
Confidence 000 111222232333333344445556778777665 68888899988877777666666 6889999999999
Q ss_pred HHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHH
Q 013991 355 MVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWF 426 (432)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~ 426 (432)
+....+.....+.+....... + . + ...+...+.++..+...+.......|..|+ ++|++.+.+..
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~---~-~-~-~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~ 347 (393)
T PRK15011 283 FLMRVAAVAGVCFYAGMLMAH---S-P-A-ILLGLQLLNAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTN 347 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHh---h-H-H-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHH
Confidence 887766555444333322211 1 1 1 112222222223333334445666777775 48888887654
No 71
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.95 E-value=3e-25 Score=213.16 Aligned_cols=341 Identities=21% Similarity=0.211 Sum_probs=261.3
Q ss_pred CCCchhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHH
Q 013991 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (432)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~ 116 (432)
+.+.+.+..++.+.++..++..+.....+.+..+..-|+.. .+++..+..+...+.+++.|.++||++||++++
T Consensus 6 plr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~------valv~~a~~LP~~Llsl~aG~laDr~drrrili 79 (524)
T PF05977_consen 6 PLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLM------VALVQAASTLPILLLSLFAGALADRFDRRRILI 79 (524)
T ss_pred cccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHHHHHHHHHHHhhcccchHHHH
Confidence 34556788889999999999999988888888888778877 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhh-----hhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHH
Q 013991 117 MGTASVVIFNTLFGLS-----VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (432)
Q Consensus 117 ~~~~~~~~~~~~~~~~-----~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 190 (432)
.+-++..+..+..++. .+.+.+++.-++.|++.+...|+ .+++.|+.|+++...++++.+...++..++||.++
T Consensus 80 ~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalg 159 (524)
T PF05977_consen 80 LSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALG 159 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHH
Confidence 9987776655444432 36788999999999999999998 99999999999999999999999999999999999
Q ss_pred hhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhcc
Q 013991 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGR 270 (432)
Q Consensus 191 ~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (432)
|.+.. ..+....+.+.++..++.++.+...++..+..+.. .+...++
T Consensus 160 G~Lva----------------~~G~~~~f~inalsfl~~i~~l~~~~~~~~~~~~~---~e~~~~~-------------- 206 (524)
T PF05977_consen 160 GILVA----------------FFGAAAAFLINALSFLISILALLRWKPPPPPSSLP---RERFFSA-------------- 206 (524)
T ss_pred HHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHccccccccccc---hhhhhhh--------------
Confidence 99987 33344445666655555444444444322211111 0000000
Q ss_pred CCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHH
Q 013991 271 EATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (432)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 350 (432)
-....+.+.++|.+...++..+++.+........+|.+..+. +|.++...|++.+..+++++++++ +.+++.+|
T Consensus 207 l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~-----l~~~a~~yGll~a~~gvGai~Gal-~~~~l~~~ 280 (524)
T PF05977_consen 207 LREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDV-----LGGGASGYGLLLAAFGVGAILGAL-LLPRLRRR 280 (524)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHH-----hCCcHHHHHHHHHHHHHHHHHHHH-HHHHhhcc
Confidence 112344455667766666666666666666777888887765 788999999999999999999984 78889999
Q ss_pred hChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHHh
Q 013991 351 LGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFVK 428 (432)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~~ 428 (432)
+++++++..+.+..+++++.+++..... ...+..++.|++........++...+.+|++.||++.+++..+.
T Consensus 281 ~~~~~lv~~~~~~~a~~~~~lal~~~~~------~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~ 352 (524)
T PF05977_consen 281 LSSRRLVLLASLLFALALLLLALSPSFW------LALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVF 352 (524)
T ss_pred cCcchhhHHHHHHHHHHHHHHhcchHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHH
Confidence 9988888888888777777766654433 34445566677777778888899999999999999999987653
No 72
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.95 E-value=1.4e-25 Score=211.84 Aligned_cols=277 Identities=16% Similarity=0.200 Sum_probs=222.8
Q ss_pred HHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHh
Q 013991 69 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV--NFWMAVLTRFLLG 146 (432)
Q Consensus 69 ~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~~~G 146 (432)
.+++.+.++ .+++.+++..|+.+++++.|++.||+|-|+++..+.++.++++++...+. +++.+++.|+++|
T Consensus 66 ~~~~ws~~~------k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqG 139 (466)
T KOG2532|consen 66 GEYDWSSTE------KGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQG 139 (466)
T ss_pred ceecCCHHH------HHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhH
Confidence 457777777 99999999999999999999999999999999999999999999998875 4567899999999
Q ss_pred hhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccchHHHHHHHHH
Q 013991 147 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLF 225 (432)
Q Consensus 147 ~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~ 225 (432)
++.|...|+ ..+.+.|.|++||++..++...+..+|.+++.+++|++.+. .+|| +.++++.+..
T Consensus 140 l~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s------~~GW---------~sifY~~g~~ 204 (466)
T KOG2532|consen 140 LGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCES------SLGW---------PSIFYVFGIV 204 (466)
T ss_pred HHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc------CCCC---------chHHHHHHHH
Confidence 999999887 99999999999999999999999999999999999999981 1454 4555888888
Q ss_pred HHHHHHHH-hhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhcc--CCCCccccccchhHHHHHHHHHHHHHHhhhHH
Q 013991 226 AFGVTIAA-FWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGR--EATPKKSLLKNWPLMSSIIVYCVFSLHDMAYS 302 (432)
Q Consensus 226 ~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (432)
+++..+++ ++..|+|.+++...+ +|++..+++..+++.+ .+.+++++++++.+|...+..+........+.
T Consensus 205 g~i~~~~w~~~~~d~P~~h~~is~------~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~ 278 (466)
T KOG2532|consen 205 GLIWFILWFLFYSDSPSKHPNISE------KELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLL 278 (466)
T ss_pred HHHHHHHHHHHhcCCcccCCCCCH------HHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 87755554 455566655333221 2222222222222222 57789999999999999999999999999999
Q ss_pred HHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhCh---------hHHHHHHHHHHHHHHHHhhH
Q 013991 303 EIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP---------IMVARIAGVLTIPLLTSYPY 373 (432)
Q Consensus 303 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~~~~~~~~~~~~~~~~ 373 (432)
.+.|.|+.+. +|++..+.|++.++..+...+.. ++++.++||..+ |-.-.++....++.++.+++
T Consensus 279 ~y~PtY~~~V-----L~f~v~~~G~~salP~l~~~~~k-~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~ 352 (466)
T KOG2532|consen 279 TYLPTYLKEV-----LGFDVRETGFLSALPFLAMAIVK-FVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAF 352 (466)
T ss_pred HHhhHHHHHH-----hCCChhhhhHHHHHHHHHHHHHH-HHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeee
Confidence 9999999998 89999999999999999999998 599999998754 22333555666666666666
Q ss_pred HHhhh
Q 013991 374 IAMLS 378 (432)
Q Consensus 374 ~~~~~ 378 (432)
.....
T Consensus 353 ~~~~~ 357 (466)
T KOG2532|consen 353 TSDEH 357 (466)
T ss_pred cCCCc
Confidence 65434
No 73
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.95 E-value=1.1e-25 Score=241.18 Aligned_cols=351 Identities=17% Similarity=0.084 Sum_probs=242.5
Q ss_pred hhHHHHHHHHHHhhcccc-chhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHH
Q 013991 41 TELFSIWIIVLCTALPIS-SLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (432)
+.+..+++..++..+... ......+.+..+++.+... ...+++.+++.+++.++++++|+++||+|||++++++.
T Consensus 9 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~ 84 (1146)
T PRK08633 9 IGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQV----ILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVK 84 (1146)
T ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHH----HHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHH
Confidence 445545555555544433 3344445666667654332 23789999999999999999999999999999999988
Q ss_pred HHHHHHHHHHh---hhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 120 ASVVIFNTLFG---LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 120 ~~~~~~~~~~~---~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
++.++..++.. .+++++.++++|+++|++.+...++ .+++.|++|+++|++++++.+.+.++|.++||.+++++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~ 164 (1146)
T PRK08633 85 LFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFE 164 (1146)
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 77666555443 4578999999999999999988886 9999999999999999999999999999999999999986
Q ss_pred cCCcCCCccccc--ccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCC
Q 013991 196 PAEKYPNLFSSE--SLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT 273 (432)
Q Consensus 196 ~~~~~~~~~gw~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (432)
. +++. ..+ .+.++..+.+.....++.++..+.+||.++......+..+.. . ......
T Consensus 165 ~-------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----------~~~~~~ 223 (1146)
T PRK08633 165 S-------VNGNTPSEI-LGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDKKKYL--F-----------PKLLWR 223 (1146)
T ss_pred h-------hcccccccc-ccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccccccccc--c-----------HHHHHH
Confidence 2 1000 000 111222222223333334444556677654432211000000 0 000011
Q ss_pred CccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccc-hhhHHHHHHHHHHHHHHHHhHHHHHHHhC
Q 013991 274 PKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQ-MVGEVLAITGFSLLVFQLSLYPFLERILG 352 (432)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 352 (432)
.++.+++++.++...+..++..........++|.|+... +|++.. ..|++.+..+++.++++ ++.+++.||.+
T Consensus 224 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~s~~~~~g~~~~~~~ig~~~g~-~~~g~l~~r~~ 297 (1146)
T PRK08633 224 NLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEV-----LGLDNTFQVQYLLAASAIGIGIGS-LLAGRLSGRHI 297 (1146)
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH-----hCCCcHHHHHHHHHHHHHHHHHHH-HHHHHHhCCce
Confidence 345567788877777666666666666677788887665 688888 89999999999988888 58899999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHHh
Q 013991 353 PIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFVK 428 (432)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~~ 428 (432)
+++.+.++.++.+++++++.+.... ....+..++.+++.+...+...+++.+..|++.||++.+..+++.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~ 367 (1146)
T PRK08633 298 ELGLVPLGALGLALSLFLLPTAPSL------ASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQ 367 (1146)
T ss_pred EccchhHHHHHHHHHHHHHHHhhhH------HHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHH
Confidence 8888777777666666555443321 233445556666777777788899999999999999998877654
No 74
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.95 E-value=9e-27 Score=230.36 Aligned_cols=311 Identities=16% Similarity=0.138 Sum_probs=230.9
Q ss_pred HHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHH
Q 013991 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (432)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 124 (432)
...+..+...+..+...+.++.+.++|+++..+ .|++.+.+.+++.++.++.|+++||+|||+.+.++.+++++
T Consensus 37 ~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~------~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~l 110 (633)
T TIGR00805 37 LLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSS------SGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGL 110 (633)
T ss_pred HHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCc------ceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHH
Confidence 334455666666778888889999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHhhhh---------------------------------------------------hHHHHHHHHHHHhhhccchh
Q 013991 125 FNTLFGLSV---------------------------------------------------NFWMAVLTRFLLGSLNGLLG 153 (432)
Q Consensus 125 ~~~~~~~~~---------------------------------------------------~~~~l~~~r~~~G~~~g~~~ 153 (432)
+++++++++ .+..++++|+++|+|.+...
T Consensus 111 g~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~ 190 (633)
T TIGR00805 111 GSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIF 190 (633)
T ss_pred HHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcch
Confidence 999998764 24567899999999999988
Q ss_pred hH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCC---------cccccccccCccchHHHHHHH
Q 013991 154 PI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPN---------LFSSESLFGKFPYFLPCLCIS 223 (432)
Q Consensus 154 ~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~---------~~gw~~~~~~~~~~~~~~~~~ 223 (432)
+. .+++.|++|+++|++.+++++.+..+|.++|+++++++.+...+|+. -.+|| | ..+||..|++.+
T Consensus 191 ~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dpr--W-iGaWwl~Fli~g 267 (633)
T TIGR00805 191 PLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPR--W-IGAWWIGFLICG 267 (633)
T ss_pred hcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCcc--H-HHHHHHHHHHHH
Confidence 86 99999999999999999999999999999999999999863222110 00111 1 224888888888
Q ss_pred HHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhh-hh---hhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHhh
Q 013991 224 LFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALES-AS---AEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDM 299 (432)
Q Consensus 224 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (432)
++.++..+.++++|++.+....+.+.+....+..++ .. .+..+..++.+...+.+++||.++...+..++......
T Consensus 268 ~l~~l~~v~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~ 347 (633)
T TIGR00805 268 GVALLTSIPFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFN 347 (633)
T ss_pred HHHHHHHHHHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 777776556666776543221111000000000000 00 00000011122346678999999999999999888889
Q ss_pred hHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHH-HHHHHHHhHHHHHHHhC--hhHHHHHHHHHHHHHHHH
Q 013991 300 AYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFS-LLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLTS 370 (432)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~-~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~ 370 (432)
++..++|.|+++. +|+++.+++.+.....+. .+++. ++++++.||++ .++.+..+.++..++++.
T Consensus 348 ~~~~~lP~yl~~~-----~g~s~~~ag~l~~~~~i~~~~vG~-~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 348 GYITFLPKYLENQ-----YGISSAEANFLIGVVNLPAAGLGY-LIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHHHHHHHH-----cCCcHHHHHHHhhhhhhhHHHHHH-hhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 9999999999876 799999999999887764 45555 68999999887 556767666666655433
No 75
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.95 E-value=1.1e-24 Score=210.85 Aligned_cols=339 Identities=13% Similarity=0.136 Sum_probs=229.8
Q ss_pred CchhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhcc-----CChH
Q 013991 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-----GRKP 113 (432)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-----Grr~ 113 (432)
++|+...++...+..+.......+.+|.+.++.|.+.++ ++.. +.....+ ++.+++|+++||+ |||+
T Consensus 10 ~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~------ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr 81 (491)
T PRK11010 10 QQPNSAILLILGFASGLPLALTSGTLQAWMTVENIDLKT------IGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRR 81 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHH------HHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCch
Confidence 345566777777788888888899999999999999988 8876 4444443 6899999999999 9988
Q ss_pred H-HHHHHHHHHHHHHHHhhh---hhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHH
Q 013991 114 V-IIMGTASVVIFNTLFGLS---VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPA 188 (432)
Q Consensus 114 ~-l~~~~~~~~~~~~~~~~~---~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 188 (432)
. +..+.++.+++..++++. ++++.+.+.+++.|++.+...+. .+++.|++|+++|+++.++...+..+|.++++.
T Consensus 82 ~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~ 161 (491)
T PRK11010 82 GWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGG 161 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHH
Confidence 5 667777777777777664 47888999999999987777765 999999999999999999999999999999999
Q ss_pred HHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhh
Q 013991 189 LGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEE 268 (432)
Q Consensus 189 ~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (432)
+++++.+ . .++|+.++.+.++..++..+..++.||+++..++ +++. . +
T Consensus 162 l~~~l~~-------~--------~~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~~~~-~~~~--~-~------------- 209 (491)
T PRK11010 162 LALWLAD-------R--------YLGWQGMYWLMAALLIPCIIATLLAPEPTDTIPV-PKTL--E-Q------------- 209 (491)
T ss_pred HHHHHHh-------c--------ccCHHHHHHHHHHHHHHHHHHHHhcCCCcccccc-ccch--h-h-------------
Confidence 9999886 1 1356666677777666655555567776432111 0000 0 0
Q ss_pred ccCCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHH-HHHHHHHHHHHHhHHHH
Q 013991 269 GREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLA-ITGFSLLVFQLSLYPFL 347 (432)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~-~~~~~~~~~~~~~~~~l 347 (432)
....+.++.++++..+...+..+++.........+.+.|+.+. +|++..+.+.... ...++.+++. ++++++
T Consensus 210 -~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~-----~G~s~~~~g~~~~~~g~i~~iiG~-ll~G~L 282 (491)
T PRK11010 210 -AVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRG-----VGFDAGEVGLVNKTLGLLATIVGA-LYGGIL 282 (491)
T ss_pred -hHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 0001234456666666555555555545445555666665443 6899999999875 4446777776 699999
Q ss_pred HHHhChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHH
Q 013991 348 ERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWF 426 (432)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~ 426 (432)
.||+++++.+.++.++..+..+.+........ ..+ .+....++..+..+...+...+...+..+++.+++.+|.++.
T Consensus 283 ~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~-~~~-~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s 359 (491)
T PRK11010 283 MQRLSLFRALMIFGILQGVSNAGYWLLSITDK-NLY-SMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSA 359 (491)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHhccc-cHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 99999988777665544443332221111111 111 122223332333344445567777788888888887776654
No 76
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.94 E-value=8.6e-25 Score=213.31 Aligned_cols=362 Identities=13% Similarity=0.067 Sum_probs=235.6
Q ss_pred HHHHHHhhcc--ccchhhhHHHHHHHhcCCccccchh-hhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHH
Q 013991 47 WIIVLCTALP--ISSLFPFLYFMIKDFQIAKREEDIG-SYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV 123 (432)
Q Consensus 47 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~s~~~~~~~-~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~ 123 (432)
....+..+.+ .....+....+.++...+..+.... ...+++.+...++..+++++.|+++|++|||+.++++.+.+.
T Consensus 51 ~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~ 130 (513)
T KOG0254|consen 51 ALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFL 130 (513)
T ss_pred HHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 3334444443 4555666666665432222211000 115899999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCC
Q 013991 124 IFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPN 202 (432)
Q Consensus 124 ~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~ 202 (432)
++.+++++++|+++++++|+++|+|.|..... ..+++|+.|++.||...+..+....+|..++..++....+
T Consensus 131 iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~------- 203 (513)
T KOG0254|consen 131 IGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSK------- 203 (513)
T ss_pred HHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhcc-------
Confidence 99999999999999999999999998887665 9999999999999999999999999999999666555443
Q ss_pred cccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhH--HHh------------hhhh-hhhhhh
Q 013991 203 LFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSY--DAL------------ESAS-AEVKEE 267 (432)
Q Consensus 203 ~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~~------------~~~~-~~~~~~ 267 (432)
. .++||.++.+..+.+++..+..+++||+|++..++.+..+... ..+ +..+ ....+.
T Consensus 204 ~--------~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~ 275 (513)
T KOG0254|consen 204 V--------YAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEA 275 (513)
T ss_pred C--------CccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhh
Confidence 0 1457777788888888877778889999988655433322221 111 1111 000011
Q ss_pred hccCC-CCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHH
Q 013991 268 EGREA-TPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPF 346 (432)
Q Consensus 268 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~ 346 (432)
..... ..+.++++........+...+..+.+.........|..+. .+..|.+... .......++..+++. .++..
T Consensus 276 ~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~i--f~~~g~~~~~-~~~~~~~~~v~~~~t-~~~~~ 351 (513)
T KOG0254|consen 276 EVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTI--FKSAGLKSDT-FLASIILGVVNFLGT-LVATY 351 (513)
T ss_pred hcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHH--HHhcCCCCch-HHHHHHHHHHHHHHH-HHHHH
Confidence 11111 1233444422222333333333333332222222222211 2223444332 333444455555555 46688
Q ss_pred HHHHhChhHHHHHHHHHHHHHHHHhhHHHhhhh-------hHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhh
Q 013991 347 LERILGPIMVARIAGVLTIPLLTSYPYIAMLSG-------FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYT 419 (432)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~ 419 (432)
+.||.|||+++..+.....+++++++....... ...+..+....+....+..+..|..+.+.+|..|.+.|++
T Consensus 352 lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~ 431 (513)
T KOG0254|consen 352 LVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSK 431 (513)
T ss_pred HHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhh
Confidence 999999999999999998888877765543321 1234445555556666777778888899999999999988
Q ss_pred hhhHHHHH
Q 013991 420 LSCHFWFV 427 (432)
Q Consensus 420 ~~~~~~~~ 427 (432)
+.+.-..+
T Consensus 432 ~~s~~~~~ 439 (513)
T KOG0254|consen 432 GASLAVAV 439 (513)
T ss_pred hHHHHHHH
Confidence 77655443
No 77
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.94 E-value=1.2e-25 Score=212.49 Aligned_cols=344 Identities=16% Similarity=0.088 Sum_probs=243.1
Q ss_pred HHHHHHHhhccccc-hhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHH
Q 013991 46 IWIIVLCTALPISS-LFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (432)
Q Consensus 46 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 124 (432)
++...+....+... ..+.+..+.+|.+....+ .+.+.+++.++++++.++.|.+.||++-.+.+....+++++
T Consensus 50 ~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~------l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~ 123 (495)
T KOG2533|consen 50 LCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQ------LGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGL 123 (495)
T ss_pred HHHHHHHHhcchhcchhHHHcCCccccchhhhh------hhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHH
Confidence 33344444444332 223333455788888888 99999999999999999999999999999999999899988
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCc
Q 013991 125 FNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (432)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 203 (432)
..++....+|++.+++.|++.|+.++...|. ..++..++.+++|++.++++.+..++|.++|++++..+.+ ..+....
T Consensus 124 ~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~-~~~~~~~ 202 (495)
T KOG2533|consen 124 FGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFK-LNGSGGL 202 (495)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhh-hcCCCCc
Confidence 8888888999999999999999999999997 9999999999999999999999999999999999998765 2222235
Q ss_pred ccccccccCccchHHHHHHHHHHHH-HHHHHhhcccccCCCCCCCcchhhh-HHHhhhhhhhhhhhhccCCCCccccccc
Q 013991 204 FSSESLFGKFPYFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVS-YDALESASAEVKEEEGREATPKKSLLKN 281 (432)
Q Consensus 204 ~gw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (432)
.|||+.| ++.+++.++ .+++.+++|+.|.+.+-..++++.. .++.++...+..+++ .+....++.+++
T Consensus 203 ~gW~~~F---------iI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~d 272 (495)
T KOG2533|consen 203 AGWRWLF---------IIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENK-FKWKGFKEALKD 272 (495)
T ss_pred CCceeeh---------hHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccc-cCHHHHHHHHhc
Confidence 6666655 777776666 5566678999887543222222111 111111111111111 455667889999
Q ss_pred hhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHh----ChhHHH
Q 013991 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL----GPIMVA 357 (432)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~ 357 (432)
|.+|...+..++......++.+++|.|+.+. .|++..+++.+..+..++++++. ++++.++||. .++...
T Consensus 273 p~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~-----~~~s~~~a~~ls~~~~~~g~v~~-i~ag~lsdr~~~~~~~~~~~ 346 (495)
T KOG2533|consen 273 PGVWPFSLCYFFLKLVNYGFSYWLPLYLKSN-----GGYSELQANLLSTPYDVGGIVGL-ILAGYLSDRLKTIFARRLLF 346 (495)
T ss_pred hhHHHHHHHHHHHhhccccHHHHHHHHHHcC-----CCcChHHhccccchHHhhhHHHH-HHHHHHHHHHhhhHHHHHHH
Confidence 9999999999999999999999999999883 58999999999999999999997 5999999994 444444
Q ss_pred HHHHHHHH-HHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchh
Q 013991 358 RIAGVLTI-PLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTY 418 (432)
Q Consensus 358 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g 418 (432)
.....+.. ++...+....... .................++.....++....+.|.
T Consensus 347 ~~~~~~~~~~g~~~l~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~ 402 (495)
T KOG2533|consen 347 IVFLCLYAIIGAISLLAAAVLP------GAYGAFLIGPYGLIATAIIALSWTSANLAGNTKA 402 (495)
T ss_pred HHHHHHHHHHHHHHHHhhccch------HHhHHHHhcchhhHHHHHHHHhhccccccchHHh
Confidence 43333322 2222222221111 1222222222233444555666666666555443
No 78
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.94 E-value=6.9e-25 Score=234.39 Aligned_cols=307 Identities=14% Similarity=0.078 Sum_probs=219.8
Q ss_pred hhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHH---HHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-Hhhh
Q 013991 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM---GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYA 159 (432)
Q Consensus 84 ~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i 159 (432)
.++..+++.+++.++++++|+++||+|||+++.. ..+...+..+.....+++++++++|+++|++.+...|+ .+++
T Consensus 54 ~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l 133 (1140)
T PRK06814 54 VTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSIL 133 (1140)
T ss_pred HHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhh
Confidence 7888899999999999999999999999997643 22222333333334589999999999999999998887 9999
Q ss_pred hhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccc
Q 013991 160 CEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPET 239 (432)
Q Consensus 160 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 239 (432)
.|++|+++|++++++.+++.++|.++||++++++.+ ..+|+..+...++..++.++..+++|++
T Consensus 134 ~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (1140)
T PRK06814 134 PDHLNKDELLGANALVEAGTFIAILLGTIIGGLATI----------------SGNFVILVALLMGIAVLGWLASLFIPKT 197 (1140)
T ss_pred HhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHh----------------ccccHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 999999999999999999999999999999999987 3345554444444444455555667765
Q ss_pred cCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcc
Q 013991 240 LHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLN 319 (432)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 319 (432)
++.......+.... ++ ....++.+.+++.++...+..++..+....+..++|.|..+. +|
T Consensus 198 ~~~~~~~~~~~~~~-~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~g 257 (1140)
T PRK06814 198 GNAAPDLKIDRNII-RS--------------TITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKET-----LG 257 (1140)
T ss_pred CCCCCCCeeccchH-HH--------------HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-----cC
Confidence 43322111100000 00 011355677888888888887777777777778899988775 68
Q ss_pred cccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHHHHHHhhHHH---------------hhhhhHHHH
Q 013991 320 YSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIA---------------MLSGFGLAF 384 (432)
Q Consensus 320 ~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~ 384 (432)
.++.+.|.+.+..++++++++ ++.+++.|+..+++.+..+.++..+..+.+.+.. .......|
T Consensus 258 ~~~~~~g~~~~~~~~g~~ig~-~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~- 335 (1140)
T PRK06814 258 GDENVATLFLAVFSVGVAVGS-FLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGW- 335 (1140)
T ss_pred CchHHHHHHHHHHHHHHHHHH-HHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccH-
Confidence 899999999999999999998 5788888776655555544444443333222210 00001112
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHHh
Q 013991 385 LLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFVK 428 (432)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~~ 428 (432)
.+.+..++.+++.+...+...+++.+.+|++.+|++.|.+++..
T Consensus 336 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~ 379 (1140)
T PRK06814 336 RILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLN 379 (1140)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHH
Confidence 23445555667777778889999999999999999999887654
No 79
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.94 E-value=5.8e-24 Score=201.85 Aligned_cols=328 Identities=15% Similarity=0.200 Sum_probs=224.0
Q ss_pred HHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhcc-----CChH-HHHHHHH
Q 013991 47 WIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-----GRKP-VIIMGTA 120 (432)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-----Grr~-~l~~~~~ 120 (432)
....+..++........+|.+.++.|.|.++ +|++..+... .+..+++|+++||+ |||| .+.++.+
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~------ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~ 76 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVEGLDIQT------IGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQV 76 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHH
Confidence 4456677778888889999999999999999 9999776665 58999999999999 8865 7888888
Q ss_pred HHHHHHHHHhhh---hhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhccc
Q 013991 121 SVVIFNTLFGLS---VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (432)
Q Consensus 121 ~~~~~~~~~~~~---~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (432)
+.+++..+.++. .+++.+++..++.++..+...+. .+++.|+.|+|+|+++.++...+.++|.++++.+++.+.+
T Consensus 77 ~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~- 155 (402)
T PRK11902 77 GLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLAD- 155 (402)
T ss_pred HHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHh-
Confidence 888877777776 45777888877888777777775 9999999999999999999999999999999999998876
Q ss_pred CCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCcc
Q 013991 197 AEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKK 276 (432)
Q Consensus 197 ~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (432)
. .++|+.++.+.++..++..+..++.||++++++++++ .. ++ .....+
T Consensus 156 ------~--------~~gw~~~f~i~a~~~l~~~l~~~~~~e~~~~~~~~~~---~~-~~--------------~~~~~~ 203 (402)
T PRK11902 156 ------R--------VLGWGNTYLLMAGLMLAGALTTLWAPEPEVPARPPRS---LG-EA--------------VVGPLR 203 (402)
T ss_pred ------c--------ccCHHHHHHHHHHHHHHHHHHHHhcCCCcccccccch---hH-HH--------------HHHHHH
Confidence 1 1256666677776665555555667775433211110 00 00 011345
Q ss_pred ccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHH-HHHHHHHHhHHHHHHHhChhH
Q 013991 277 SLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGF-SLLVFQLSLYPFLERILGPIM 355 (432)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~ 355 (432)
+++|+|.++...+..++..........+.+.++.+. +|+++.+.+.+....+. +.+++. ++++++.||+++++
T Consensus 204 ~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~-----~G~~~~~~g~~~~~~~~~~~i~g~-~~~g~l~~r~g~~~ 277 (402)
T PRK11902 204 DFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRG-----AGFSAGEVGIVNKTLGLAATIVGA-LAGGTLMVRLGLYR 277 (402)
T ss_pred HHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHhHHH
Confidence 678888887766665555544333333334344433 68899999998876655 456665 68999999999998
Q ss_pred HHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHH---HHHHHHHhhhhhHHHHHHHHHhccccccchhhhhh
Q 013991 356 VARIAGVLTIPLLTSYPYIAMLSGFGLAFLLN---CASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSC 422 (432)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~ 422 (432)
.+..+.....+..+.+.......+ ..+.... +..+..++..+...+....++.+..|.++++..++
T Consensus 278 ~l~~~~~~~~l~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (402)
T PRK11902 278 SLMLFGVLQAVSNLGYWVLAVTPK-HLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYALLSA 346 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHH
Confidence 877666655544333322211111 1111111 11134445555667777778888888777765333
No 80
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.94 E-value=7e-24 Score=204.32 Aligned_cols=361 Identities=14% Similarity=0.079 Sum_probs=231.4
Q ss_pred CchhHHHHHHHHHHhhccccchhhhHH-HHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhc-cCChHHHH
Q 013991 39 PITELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVII 116 (432)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~ 116 (432)
+++.++.++...+...+..+...+.++ ++.+++|.+..+ .+++.+.+.....+..++.|+++|| +||||+++
T Consensus 12 ~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~------a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~ 85 (489)
T PRK10207 12 QPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQ------AFITFGAFAALVYGLISIGGYVGDHLLGTKRTIV 85 (489)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHH
Confidence 346677777777778888777777665 567789999988 9999999998888889999999999 99999999
Q ss_pred HHHHHHHHHHHHHhhhhhHHH-HHHHHHHHhhhccchhhH-Hhhhhhhcccc--hhhhhhhhHHHHHHHHHHHHHHHHhh
Q 013991 117 MGTASVVIFNTLFGLSVNFWM-AVLTRFLLGSLNGLLGPI-KAYACEIFREE--HQALGLSTVSTAWGIGLIIGPALGGF 192 (432)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~-l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~ 192 (432)
++.+++.+++++++++++... ++++|+++|+|.|...+. .+++.|.+|++ +|++++++++.+.++|..+||.++++
T Consensus 86 ~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~ 165 (489)
T PRK10207 86 LGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPV 165 (489)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999876444 558999999999988775 99999999877 45789999999999999999999999
Q ss_pred hcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCC--CCCcchhhhHH---------------
Q 013991 193 LAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHN--DDDDSCDVSYD--------------- 255 (432)
Q Consensus 193 l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~--~~~~~~~~~~~--------------- 255 (432)
+.+ .+|| +..|.+.++..+..++.....++..+... .++++.+....
T Consensus 166 l~~-------~~gw---------~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~ 229 (489)
T PRK10207 166 IAD-------KFGY---------SVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCA 229 (489)
T ss_pred HHH-------hhCh---------HHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHH
Confidence 998 4454 44445554433333333333332221111 10101110000
Q ss_pred Hhhh-hhhhh---------------hhhhccCCCCccccccchhHHHHHHH--HHHHHHHhhhHHHHHHhhhcCCCcCCC
Q 013991 256 ALES-ASAEV---------------KEEEGREATPKKSLLKNWPLMSSIIV--YCVFSLHDMAYSEIFSLWANSPKKLGG 317 (432)
Q Consensus 256 ~~~~-~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (432)
...+ ..... .++.+ ..+.+|+|.+....+. ..++..........++.|.++......
T Consensus 230 ~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~-----~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~ 304 (489)
T PRK10207 230 WLMHNVEVANLVLIVLSIVVTIIFFREAFK-----LDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEI 304 (489)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHhc-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccc
Confidence 0000 00000 00011 1145566655443322 333334444444566666653222221
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhH-------HHHHHHHHHHHHHHHhhH----HHhhhhhHHHHHH
Q 013991 318 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM-------VARIAGVLTIPLLTSYPY----IAMLSGFGLAFLL 386 (432)
Q Consensus 318 ~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 386 (432)
.|+.. ....+.+...+..++.+ ++.+++.||.++|+ -+.+++++..++++.+.. .....+.....++
T Consensus 305 ~G~~i-~~~~~~~~n~~~iii~~-pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~ 382 (489)
T PRK10207 305 LGFSI-NPVSFQALNPFWVVVAS-PILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFI 382 (489)
T ss_pred cceEE-CHHHHHhHhHHHHHHHH-HHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHH
Confidence 23322 12233334444454554 46678889988775 255666666666543321 1111111112334
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHHh
Q 013991 387 NCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFVK 428 (432)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~~ 428 (432)
....++.+.+.....|..++.+.+.+|++.+|.++|++++.+
T Consensus 383 i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~ 424 (489)
T PRK10207 383 VLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQ 424 (489)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 456677788888999999999999999999999999988654
No 81
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1.4e-23 Score=186.46 Aligned_cols=337 Identities=16% Similarity=0.166 Sum_probs=264.5
Q ss_pred CchhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHH
Q 013991 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (432)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~ 118 (432)
++..+..+....++.++......+.+|.+.+.|+++..| .+++..+++.++.+.+++.|++.+|+|+|+-++.+
T Consensus 11 ~~~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~------a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lg 84 (422)
T COG0738 11 VKLAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFE------ASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLG 84 (422)
T ss_pred ceeHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHH------HHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHH
Confidence 344566677778888888889999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh---hhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhc
Q 013991 119 TASVVIFNTLFG---LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (432)
Q Consensus 119 ~~~~~~~~~~~~---~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (432)
+.++++++.++. ...++..++++-++.|.|.+...+. .++++...++++..+.+++.+...++|.++||.+++.+.
T Consensus 85 L~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~li 164 (422)
T COG0738 85 LLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLI 164 (422)
T ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 999999999985 5567888999999999999999886 999999999999999999999999999999999999998
Q ss_pred ccC----CcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhc--ccccCCCCCCCcchhhhHHHhhhhhhhhhhhh
Q 013991 195 QPA----EKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL--PETLHRHNDDDDSCDVSYDALESASAEVKEEE 268 (432)
Q Consensus 195 ~~~----~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (432)
... .+-+....|+... -..++.|+...+...++..+..... |+.++...++. +
T Consensus 165 ls~~~~~~~~~~~~~~~~~~-~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~---~----------------- 223 (422)
T COG0738 165 LSGVALTMSAAQILAIKGAD-ASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLG---A----------------- 223 (422)
T ss_pred HhhhhhccCHHHHHHHHHHH-HHhhhhHHHHHHHHHHHHHHHHHhccCCcCCccccccc---c-----------------
Confidence 620 0001112222222 2236666666665555444333332 22221111110 0
Q ss_pred ccCCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHH
Q 013991 269 GREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLE 348 (432)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~ 348 (432)
.+.....+++++|.++...+..+++-..+....++++.|..+. .|.+..+.....+....+..+|+ +++.++.
T Consensus 224 -~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~-----~g~~~~~aa~~~s~~~~~~~vGR-Fig~~lm 296 (422)
T COG0738 224 -SGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEEL-----LGLNEQQAAYYLSFFWVGFMVGR-FIGSALM 296 (422)
T ss_pred -cccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhc-----CCccHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 0011456789999999999999999999999999999999886 58899999999999999999998 5888888
Q ss_pred HHhChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccc
Q 013991 349 RILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVL 416 (432)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 416 (432)
+|+...|.+....+...+.++...+.... +.+....+.+.+.+..+|...+...+..|++.
T Consensus 297 ~~~~~~k~Laf~a~~~ill~~~~~l~~g~-------v~~~~l~~ig~F~simfPTIfslal~~l~~~t 357 (422)
T COG0738 297 SRIKPEKYLAFYALIAILLLLAVALIGGV-------VALYALFLIGLFNSIMFPTIFSLALKNLGEHT 357 (422)
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHhcCh-------HHHHHHHHHHHHhHHHHHHHHHHHHhccCccc
Confidence 89999999888877776666666555442 24455566777889999999999999998543
No 82
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.93 E-value=2.1e-23 Score=200.95 Aligned_cols=364 Identities=12% Similarity=0.096 Sum_probs=235.5
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHHHH-H--hcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhc-cCChHHHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFMIK-D--FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVII 116 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~ 116 (432)
+.++.++...+...+..+...+.+|.+.+ + +|.+..+ .+++.+.+.++..+++++.|+++|| +|||+++.
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~------ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~ 83 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQ------AFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMV 83 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHH------HHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHH
Confidence 45667777888888888888888886654 4 8999998 9999999999999999999999999 89999999
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-Hhhhhhhcccch---hhhhhhhHHHHHHHHHHHHHHHHhh
Q 013991 117 MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEH---QALGLSTVSTAWGIGLIIGPALGGF 192 (432)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~~g~~~~~~ 192 (432)
++.++.+++.++.+++++++.++++|.+.|++.|...+. .++++|++|+++ |+++.++.+.+.++|.++||.++++
T Consensus 84 ~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~ 163 (475)
T TIGR00924 84 LGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGV 163 (475)
T ss_pred HHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988889999999999999888775 899999998754 8889999999999999999999999
Q ss_pred hcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCC---cchh-hhHHHh-----------
Q 013991 193 LAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDD---DSCD-VSYDAL----------- 257 (432)
Q Consensus 193 l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~~~-~~~~~~----------- 257 (432)
+.+ ..+|+..+.+.++..++.++.....++..+..++++ ++++ ......
T Consensus 164 l~~----------------~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (475)
T TIGR00924 164 IAE----------------NYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVF 227 (475)
T ss_pred HHH----------------hcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHH
Confidence 987 334555556655444444333333332211111000 0000 000000
Q ss_pred hhh--h-hh-hh---------------hhhccCC-CCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCC
Q 013991 258 ESA--S-AE-VK---------------EEEGREA-TPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGG 317 (432)
Q Consensus 258 ~~~--~-~~-~~---------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (432)
... . +. .. +....++ ....+..|...+....+...++...+....+.++.+..+.....-
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~ 307 (475)
T TIGR00924 228 FCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEM 307 (475)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccc
Confidence 000 0 00 00 0000001 011111122233334444445555555555566666554311110
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHhH---HHHHHH-hChhHHH--HHHHHHHHHHHHHhhHHHhhh---hhHHHHHHHH
Q 013991 318 LNYSTQMVGEVLAITGFSLLVFQLSLY---PFLERI-LGPIMVA--RIAGVLTIPLLTSYPYIAMLS---GFGLAFLLNC 388 (432)
Q Consensus 318 ~g~s~~~~g~~~~~~~~~~~~~~~~~~---~~l~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 388 (432)
.++ ....+.+.+...+..++.+.++. .++.|| .+.+... .++.++..+++....+..... ......++..
T Consensus 308 ~~~-~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~ 386 (475)
T TIGR00924 308 LGM-SVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVL 386 (475)
T ss_pred cce-EECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHH
Confidence 111 12366777777777777763322 234443 2223333 566777666666654321110 1123334566
Q ss_pred HHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 389 ASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
..++.+.+.....|...++..+..|++.||+..|.+...
T Consensus 387 ~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~ 425 (475)
T TIGR00924 387 IYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLA 425 (475)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 777888899999999999999999999999999998754
No 83
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.93 E-value=1.4e-23 Score=199.50 Aligned_cols=333 Identities=11% Similarity=0.005 Sum_probs=224.4
Q ss_pred HHHHHHHHhhccccchhhhHH-HHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCC-hHHHHHHHHHH
Q 013991 45 SIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR-KPVIIMGTASV 122 (432)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~~l~~~~~~~ 122 (432)
.+....++......+..|.++ ++.+++|.+..+ .|++.+++.++..++++++|.++||+|| |+++.++.++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~------iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~ 79 (418)
T TIGR00889 6 KLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAE------IGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAG 79 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 345566667777777766665 666779999999 9999999999999999999999999965 77888888888
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-Hhhh----h----hhcccchhhhhhhhHHHHHHHHHHHHHHHHhhh
Q 013991 123 VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYA----C----EIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (432)
Q Consensus 123 ~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i----~----~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 193 (432)
.++..+..+.++++.+++.|++.|++.+...+. .+.. . |......|.+..| .+|.++||.+++.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l 153 (418)
T TIGR00889 80 ALLLFFAAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLL 153 (418)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHh
Confidence 888888888899999999999999976655443 3332 2 2233334555544 46888899998877
Q ss_pred cccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCC
Q 013991 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT 273 (432)
Q Consensus 194 ~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (432)
.. ...| .++++.++..++..+..+.+||+++.+++++. +. ++..+.
T Consensus 154 ~~----------------~~~~-~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~--~~---------------~~~~~~ 199 (418)
T TIGR00889 154 DI----------------ELSN-IQLYITAGSSALLGVFALTLPDIPVAKSTAKM--SI---------------KVMLGL 199 (418)
T ss_pred cc----------------cchh-HHHHHHHHHHHHHHHHHhcCCCCCCCcccccc--CH---------------HHHhhh
Confidence 43 1112 23445555455544455677876432211110 00 000111
Q ss_pred CccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCC--cccccchhhHHHHHHHHHHHHHHHHhHHHHHHHh
Q 013991 274 PKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGG--LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL 351 (432)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 351 (432)
..+..+|+|+++...+..++..........+.+.|.++...... -+++....+...+...+..+++. +..+++.||+
T Consensus 200 ~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~-~~~g~l~dr~ 278 (418)
T TIGR00889 200 DAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFI-LTIPFFLKRF 278 (418)
T ss_pred hHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHH-HHHHHHHHHh
Confidence 23456788887776666666555444555566666654200000 12345677999999888888887 5889999999
Q ss_pred ChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHH
Q 013991 352 GPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWF 426 (432)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~ 426 (432)
++|+++.++.++..+.+..+....... ..+..+++..++.+.+.+...+....++.+..|+++|+++.|.+++
T Consensus 279 g~r~~l~~~~~~~~v~~~l~~~~~~~~--~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~ 351 (418)
T TIGR00889 279 GIKKVMLLSLVAWALRFGFFAYGDPEY--FGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTL 351 (418)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHcCcch--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 999999999888777665554421111 1122344455566666666778888899999999999999999863
No 84
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.93 E-value=1.3e-25 Score=197.91 Aligned_cols=316 Identities=17% Similarity=0.159 Sum_probs=232.2
Q ss_pred HHHHHHHHhhccccchhhhHHHHHHHhcC--------------------------------------------Cccccch
Q 013991 45 SIWIIVLCTALPISSLFPFLYFMIKDFQI--------------------------------------------AKREEDI 80 (432)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------s~~~~~~ 80 (432)
.+.+..+.+.+....+.|.+|.+..|.+. .......
T Consensus 25 iv~ialllDnmL~~vivPiiP~~L~d~~~~p~~~~~~~~is~~~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~e 104 (464)
T KOG3764|consen 25 IVSIALLLDNMLYTVIVPIIPGYLYDIQAEPTIIQPFFPISTAPIPPGSMSSFSSLNISTESTNASAGKSPAEAISLDRE 104 (464)
T ss_pred EEehhhhccCccceeeeccCccHHHHhccCCccCccccccccCCCCCccccceecccCCccccccccccCchhccCcccc
Confidence 55667777888888888888877665552 0000111
Q ss_pred hhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-Hhhh
Q 013991 81 GSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYA 159 (432)
Q Consensus 81 ~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i 159 (432)
..-+|++.+.+.+.+.+.+++.|.+.||+|+|-.+++|++.+..+++++++..++++++++|.+||+|.++..++ .+++
T Consensus 105 ~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglaml 184 (464)
T KOG3764|consen 105 NTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAML 184 (464)
T ss_pred ccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHH
Confidence 223999999999999999999999999999999999999999999999999999999999999999999998887 9999
Q ss_pred hhhcccch-hhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhccc
Q 013991 160 CEIFREEH-QALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPE 238 (432)
Q Consensus 160 ~~~~~~~~-r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 238 (432)
+|.+|+++ |++++|+...+.++|..+||.+||.+.+ ..|.+.||++.+++.++-....+++-|
T Consensus 185 Ad~f~~d~er~~vmGialgfislG~lvgPpfGGilYe----------------~~Gk~aPFlVL~~v~Lld~~L~l~vi~ 248 (464)
T KOG3764|consen 185 ADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYE----------------FAGKSAPFLVLAIVLLLDGALQLLVIE 248 (464)
T ss_pred HHHcccchhhhHHHHHHHHHHhccceecCCcccchHh----------------hcCCcCcHHHHHHHHHHHHHHHHheeC
Confidence 99999765 7999999999999999999999999998 566788889998888875555444433
Q ss_pred c-cCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCC
Q 013991 239 T-LHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGG 317 (432)
Q Consensus 239 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (432)
+ ....++. .+..+.++++++|.++.........+.........++.|..+.
T Consensus 249 p~~~~~~~~-----------------------~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~----- 300 (464)
T KOG3764|consen 249 PTEMDPDST-----------------------EQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLET----- 300 (464)
T ss_pred ccccCcccc-----------------------ccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHh-----
Confidence 2 2222111 1224677888999887766655555555555555666766665
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhC--hhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHh
Q 013991 318 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNL 395 (432)
Q Consensus 318 ~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (432)
+.-+.-+.|..+....+..+++. .+.+.+.||++ |......++++...++...++..... ..|.......+..+.
T Consensus 301 m~~p~w~~G~~fLp~~~~y~ig~-~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~--~L~vp~~~l~~~i~~ 377 (464)
T KOG3764|consen 301 MFTPGWEVGLAFLPASLSYAIGT-NLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIA--QLWVPNFGLGFGIGL 377 (464)
T ss_pred ccCCCcceeeeecccccchhccC-chHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHH--HHhhhhHHHHHHHHH
Confidence 55344488998888899999987 68899999998 54555556666666566666665444 233333333343334
Q ss_pred hhhhHHHHHHHH
Q 013991 396 LSVSIITGLFIL 407 (432)
Q Consensus 396 ~~~~~~~~~~~~ 407 (432)
..+...|....+
T Consensus 378 ~dasl~P~l~~l 389 (464)
T KOG3764|consen 378 ADASLIPTLGYL 389 (464)
T ss_pred HHHHHhhhhHHh
Confidence 444444444443
No 85
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.93 E-value=1.9e-23 Score=198.05 Aligned_cols=335 Identities=13% Similarity=0.130 Sum_probs=215.7
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHH-HHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (432)
+.++......++.........|.+|.+ .+++|.+..+ .|++.+++.++..+++++.|+++||+|||+.++.+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~ 75 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTD------TGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWII 75 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 345566667777788888888888855 5568999999 999999999999999999999999999999998877
Q ss_pred HHHHHHHHHHh---hh-----hhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHH
Q 013991 120 ASVVIFNTLFG---LS-----VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (432)
Q Consensus 120 ~~~~~~~~~~~---~~-----~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 190 (432)
...+++..... .. +....+++.|++.|++.+...+. ..+..|..+ ++++.++......++|.++||.++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~ 153 (396)
T TIGR00882 76 SGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIA 153 (396)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHH
Confidence 66655443321 11 12344566788888887776664 666666432 345567778888899999999999
Q ss_pred hhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhh-cccccCCCCCCCcchhhhHHHhhhhhhhhhhhhc
Q 013991 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFW-LPETLHRHNDDDDSCDVSYDALESASAEVKEEEG 269 (432)
Q Consensus 191 ~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (432)
+.+.+ ++|+.++.+.+++.++..+..+. .||++++++ +.+ . .+ .++++
T Consensus 154 g~l~~-----------------~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~----~~------~~~~~ 202 (396)
T TIGR00882 154 GILFS-----------------IDPQIVFWLGSGFALILMLLLMFAKPKAPSSAT-VAN---A----LG------ANASA 202 (396)
T ss_pred hhhhc-----------------cCchHHHHHHHHHHHHHHHHHHHhCCCCchhhh-hhc---c----cc------cccCC
Confidence 98764 24555667776666654444443 333322110 000 0 00 00011
Q ss_pred cCCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHH
Q 013991 270 REATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLER 349 (432)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~ 349 (432)
++.++.++.+|||+++...+..+............++.|..+.... .+.+....|...+...+...++. ...+++.|
T Consensus 203 ~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~--~~~~~~~~g~~~~~~~i~~~~~~-~~~g~l~~ 279 (396)
T TIGR00882 203 FSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFAT--PQQGTRVFGYVTTMGELLNALIM-FCAPLIIN 279 (396)
T ss_pred CCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--cccchHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 1122456778888887666555555544445555566666543211 24566678888888888888876 58899999
Q ss_pred HhChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhH
Q 013991 350 ILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCH 423 (432)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~ 423 (432)
|+++|+.+.++..+..+...+........ .+.+...+.+.+.............+..|++.+++..+.
T Consensus 280 r~g~~~~l~~~~~l~~l~~~~~~~~~~~~------~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~ 347 (396)
T TIGR00882 280 RIGAKNALLIAGTIMSVRIIGSSFATTAL------EVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLI 347 (396)
T ss_pred HhccchhHHHHHHHHHHHHHHHHhcCChH------HHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehH
Confidence 99999998888877776665544322211 123333444444333333444455666777777776554
No 86
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.93 E-value=1.3e-23 Score=200.63 Aligned_cols=336 Identities=12% Similarity=0.078 Sum_probs=207.8
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHH-HHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (432)
+.++.+.+..++..+......+.+|.+ .+++|.+..+ .|++.+++.++..++++++|+++||+|||++++++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~------~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~ 83 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTD------TGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWII 83 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH
Confidence 455666667777777777788888855 4559999999 999999999999999999999999999999998876
Q ss_pred HHHHHHHHHHh---hhh-----hHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHH
Q 013991 120 ASVVIFNTLFG---LSV-----NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (432)
Q Consensus 120 ~~~~~~~~~~~---~~~-----~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 190 (432)
.+.+++..... .++ .....+++++..|.+.....+. ..+..+ . +++|++.++......++|..++|.++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~ 161 (420)
T PRK09528 84 SGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIA 161 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHH
Confidence 66554433221 111 1111222333333332222222 233222 2 34567788888899999999999999
Q ss_pred hhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhcc
Q 013991 191 GFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGR 270 (432)
Q Consensus 191 ~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (432)
+.+.+ . +|+.++++.++..++.++..+..+++++++....++++. + +++.
T Consensus 162 g~l~~--------~---------~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-------~~~~ 211 (420)
T PRK09528 162 GILFN--------I---------NPQINFWLGSGSALILLVLLFFAKPDAPSTAKVANALGA------N-------ASAV 211 (420)
T ss_pred HHHHh--------c---------CchHhHHHHHHHHHHHHHHHhcccccccchhhhccchhc------c-------cccc
Confidence 99875 1 344455666666555444444443322221110000000 0 0000
Q ss_pred CCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHH
Q 013991 271 EATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (432)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 350 (432)
..+..++.+|+|+++...+...............+|.|..+.. .+.+.+..+.|.+.+...+...++. +..+++.||
T Consensus 212 ~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~-~~~g~l~dr 288 (420)
T PRK09528 212 SLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFF--ATPEQGTRVFGYLNSFQVFLEALIM-FFAPFIINR 288 (420)
T ss_pred cHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHH--hccCcchHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 1112345677777666555444444444444445666654321 1135566788999998888888887 689999999
Q ss_pred hChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhH
Q 013991 351 LGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCH 423 (432)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~ 423 (432)
+++|+.+..+.++..+...++++..... .+.....+.+.......+....++.+..|++.+++.++.
T Consensus 289 ~g~~~~~~~~~~l~~~~~~l~~~~~~~~------~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 355 (420)
T PRK09528 289 IGAKNALLLAGTIMAVRIIGSGFATGPL------EVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLV 355 (420)
T ss_pred hCcchhhHHHHHHHHHHHHHHHhcccHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeee
Confidence 9999998888877777666655433221 223334444445555556667788888999998887654
No 87
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.92 E-value=3.3e-22 Score=191.47 Aligned_cols=344 Identities=13% Similarity=0.112 Sum_probs=224.1
Q ss_pred hhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhh
Q 013991 53 TALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS 132 (432)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 132 (432)
..+........++.+.+|+|.++. ..|+.+...++..+..++.|+++|.+|||.+++.+.++..++++.++.+
T Consensus 56 ~~~~~~~~a~~l~~I~~diG~~~~-------~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA 128 (599)
T PF06609_consen 56 AYFVLVLPASILPYINADIGGSDN-------WSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATA 128 (599)
T ss_pred HHHHHhccHHHHHHHHHhcCCCcc-------chHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcC
Confidence 344455556777899999998755 6899999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhhhccchhhHHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccC
Q 013991 133 VNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGK 212 (432)
Q Consensus 133 ~~~~~l~~~r~~~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~ 212 (432)
+|...++.+..+.|+|.|........++|..|.|.|....++...........+|.++..+.. .-+|||.|
T Consensus 129 ~~~~~~iag~~l~GvgaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~-------~~~WRw~~-- 199 (599)
T PF06609_consen 129 QNMNTFIAGMVLYGVGAGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAA-------HSGWRWIF-- 199 (599)
T ss_pred CcHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhcc-------CCCcchHH--
Confidence 999999999999999987777667779999999999988877776666666677888776665 34554444
Q ss_pred ccchHHHHHHHHHHHHHHHH-H-hhcccccCCCCCCCcchhhhHHHhhh-------------------------hhhhh-
Q 013991 213 FPYFLPCLCISLFAFGVTIA-A-FWLPETLHRHNDDDDSCDVSYDALES-------------------------ASAEV- 264 (432)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~-~-~~~~e~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~- 264 (432)
++.++...+.++. . +..|++.+..+.++...+....++|- ..++.
T Consensus 200 -------~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~ 272 (599)
T PF06609_consen 200 -------YIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAH 272 (599)
T ss_pred -------HHHHHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCcc
Confidence 4444443333222 2 23333221111111111111111110 00110
Q ss_pred -----------------hhh--hccCCCCccccccc-hhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCccccc--
Q 013991 265 -----------------KEE--EGREATPKKSLLKN-WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYST-- 322 (432)
Q Consensus 265 -----------------~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~-- 322 (432)
.|. ..+++....+++|+ |.+....+..++....+.+...++|...... ++-++
T Consensus 273 VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~v-----f~~d~~~ 347 (599)
T PF06609_consen 273 VIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNV-----FGSDPIS 347 (599)
T ss_pred chhhHHHHHHHHHHHHHhhhhccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----ccCCCcc
Confidence 122 22456677788887 4555555666666666777777888765554 33333
Q ss_pred -chhhHHHHHHHHHHHHHHHHhHHHHHHHhChhH-HHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhH
Q 013991 323 -QMVGEVLAITGFSLLVFQLSLYPFLERILGPIM-VARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSI 400 (432)
Q Consensus 323 -~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (432)
...+......+.+..++. .+.+.+.++.++.| .+..+.+++.+++-.+........ ..++ ...++.+++.+..
T Consensus 348 ~~~~~~~s~~~~fg~~~g~-~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~-~~~i---~~~~l~g~giG~~ 422 (599)
T PF06609_consen 348 ITEIGWISSPVGFGSCAGA-VILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNK-NAAI---AFLVLAGFGIGGI 422 (599)
T ss_pred cceeehhhhhHHHHHHHHH-HHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCc-chHH---HHHHHHHHhHHHH
Confidence 356777777777777776 46667777666544 444555555544444433322221 2221 2233444455555
Q ss_pred HHHHHHHHhccccccchhhhhhHHHHHhh
Q 013991 401 ITGLFILQNRAVVRVLTYTLSCHFWFVKL 429 (432)
Q Consensus 401 ~~~~~~~~~~~~p~~~~g~~~~~~~~~~~ 429 (432)
........+-..|++..|+++|+....|.
T Consensus 423 ~~~~~~~~ql~~p~~~ig~a~gL~~s~R~ 451 (599)
T PF06609_consen 423 LVPAIVIAQLIVPDEDIGTATGLTGSIRS 451 (599)
T ss_pred HHHHHHeeEeeeCchHHHHHHHHHHHHHH
Confidence 55566666778899999999998887774
No 88
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.91 E-value=3.5e-22 Score=191.12 Aligned_cols=354 Identities=16% Similarity=0.110 Sum_probs=255.4
Q ss_pred chhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHH
Q 013991 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (432)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (432)
|-..+..++......-.......+.+.++++++.+..+ ++|+.++......+.+|+.+.+.||+|.|.+.++|.
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~------~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~ 118 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQ------IAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGG 118 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccH------HHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHH
Confidence 33333444444444444455567789999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHH-HHHhhhccchhh-HHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccC
Q 013991 120 ASVVIFNTLFGLSVNFWMAVLTR-FLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (432)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r-~~~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 197 (432)
++..++.++..+++++|++++.. ++.|+|.|+... ...++..+ .+++|+.+.|+...+.++|.++-|.+...+.+
T Consensus 119 ~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~Y-F~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~-- 195 (509)
T KOG2504|consen 119 LVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTY-FEKKRALATGIAVSGTGVGTVVFPPLLKYLLS-- 195 (509)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhH-hHHHHHHHHhhhhccCCcceeeHHHHHHHHHH--
Confidence 99999999999999999988876 778899888655 56667655 46789999999999999999999999999998
Q ss_pred CcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhccc-ccCCCCC--------------------CC--cchhhhH
Q 013991 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPE-TLHRHND--------------------DD--DSCDVSY 254 (432)
Q Consensus 198 ~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e-~~~~~~~--------------------~~--~~~~~~~ 254 (432)
+++||...+..+.+.+-..+....+++ +++.... +. .+.....
T Consensus 196 --------------~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (509)
T KOG2504|consen 196 --------------KYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLK 261 (509)
T ss_pred --------------HhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCC
Confidence 445555556666665554444443333 2221000 00 0000000
Q ss_pred H----Hhhhhhhhhhhhh--ccCCCC---ccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchh
Q 013991 255 D----ALESASAEVKEEE--GREATP---KKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMV 325 (432)
Q Consensus 255 ~----~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~ 325 (432)
+ ..+..++...+.+ ..+... .+++++++.++...+...+..........++|.|..+ .|++..++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~------~g~~~~~a 335 (509)
T KOG2504|consen 262 KLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKS------LGLSSNDA 335 (509)
T ss_pred cccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh------cCCChhhh
Confidence 0 0000000000001 111112 3688999999999888888888888888888888875 69999999
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHhC--hhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHH
Q 013991 326 GEVLAITGFSLLVFQLSLYPFLERILG--PIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITG 403 (432)
Q Consensus 326 g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (432)
+.++++.++...+++ ++.+++.|+.. ++.+..++.+..++.....++..... .+.....+.+++.+.....
T Consensus 336 a~l~Siigi~~i~gR-i~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~------~l~~~~~~fG~~~g~~~~l 408 (509)
T KOG2504|consen 336 AFLLSIIGVSDIIGR-IILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYV------GLIVFSILFGFCVGSFSSL 408 (509)
T ss_pred HHHHHHHHHhhhhhh-hhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHH------HHHHHHHHHHHHHHHHHHH
Confidence 999999999999998 59999999977 44555566666666665555554433 4555566667777777767
Q ss_pred HHHHHhccccccchhhhhhHHHHHhh
Q 013991 404 LFILQNRAVVRVLTYTLSCHFWFVKL 429 (432)
Q Consensus 404 ~~~~~~~~~p~~~~g~~~~~~~~~~~ 429 (432)
....+.+.++.++-..++|.....+-
T Consensus 409 ~~~i~~~~~g~~~l~~a~Gl~l~~~g 434 (509)
T KOG2504|consen 409 TPVILVDLVGLEKLSNAYGLLLLFQG 434 (509)
T ss_pred HHHHHHHHcChhhcchHHHHHHHHhH
Confidence 77788999999999999999887654
No 89
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.91 E-value=5.5e-22 Score=182.58 Aligned_cols=357 Identities=12% Similarity=0.034 Sum_probs=225.8
Q ss_pred chhHH-HHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHH
Q 013991 40 ITELF-SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (432)
Q Consensus 40 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~ 118 (432)
|+... .+++..|+.-+ ........|++.+++|+++++. .|.+.+++..+++++.++.|+++||+|.|+++.++
T Consensus 25 W~~~~~~lC~fGF~~e~-R~n~s~a~p~L~~elglT~~qv-----~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~ 98 (511)
T TIGR00806 25 WRVLVLYLCFYGFMAQF-RPGESFITPYLLTVLNFTEETV-----TNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQ 98 (511)
T ss_pred hhHHHHHHHHHHHHHHh-hchHHHHHHHHHHHcCCCHHHh-----cchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHH
Confidence 44433 34444443333 4556667789999999998762 68999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhHHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCC
Q 013991 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (432)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (432)
.+.+++..++.++++++..+.+.|++.|++.|...+...++..++|+++|+++.++...+..+|.++++++++++.
T Consensus 99 ~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~---- 174 (511)
T TIGR00806 99 ALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV---- 174 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 9999999999999999999999999999999888855999999999999999999999999999999999999944
Q ss_pred cCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCC---CCCCCcchhhhHHHhhhhhhh----hhh-hh--
Q 013991 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHR---HNDDDDSCDVSYDALESASAE----VKE-EE-- 268 (432)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~---~~~~~~~~~~~~~~~~~~~~~----~~~-~~-- 268 (432)
.+||++.. ...++......++++..+++|..++. ++++..+.... .+.++...+ ..+ .+
T Consensus 175 ----s~gWr~y~------~Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 243 (511)
T TIGR00806 175 ----TLGWISYS------TLNIISLVFMTFSVFLALFLKRPKRSLFFNRLEDVRGALP-CELDQMVPGPGGKLEDYLGTC 243 (511)
T ss_pred ----hcCchhHH------HHHHHHHHHHHHHHHHHHhCCCCchhhhhccccccccccc-cccccCCCCCccccchhhhhh
Confidence 46776533 33344444444566666778844331 11110000000 000000000 000 00
Q ss_pred -----ccCCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHh
Q 013991 269 -----GREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSL 343 (432)
Q Consensus 269 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~ 343 (432)
+.-....++..+|+.++.-.+-+.+-...+....++......... +-.....|..-++..+.+++.. +.
T Consensus 244 ~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~-----~~~~~yNG~veA~~tllga~~a-~~ 317 (511)
T TIGR00806 244 RDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTLD-----ESLNKYNGAVDAASTLLGAITS-FI 317 (511)
T ss_pred hhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHcC-----CCccccCCHHHHHHHHHHHHHH-HH
Confidence 001122334456666555444443333332222222221111110 1011256777777777777777 47
Q ss_pred HHHHHHHhChhHHHHHHHHHH--HHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhh
Q 013991 344 YPFLERILGPIMVARIAGVLT--IPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLS 421 (432)
Q Consensus 344 ~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~ 421 (432)
.+++..++.+...+.++.... +..++++.+..+. ++.++..++.........+....-+++...++.-|-+.
T Consensus 318 ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~I------w~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvF 391 (511)
T TIGR00806 318 AGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDI------WVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVF 391 (511)
T ss_pred HHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccch------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEE
Confidence 777755554433444333322 2223333322222 24555666666677777788888888888888878888
Q ss_pred hHHHHHhh
Q 013991 422 CHFWFVKL 429 (432)
Q Consensus 422 ~~~~~~~~ 429 (432)
|+..|+-+
T Consensus 392 GiNtfvAl 399 (511)
T TIGR00806 392 GINTFVAT 399 (511)
T ss_pred ecHHHHHH
Confidence 88877654
No 90
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.91 E-value=1.9e-22 Score=194.04 Aligned_cols=326 Identities=16% Similarity=0.112 Sum_probs=219.5
Q ss_pred ccchhhhH-HHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhc----cCCh-HHHHHHHHHHHHHHHHHh
Q 013991 57 ISSLFPFL-YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRK-PVIIMGTASVVIFNTLFG 130 (432)
Q Consensus 57 ~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr----~Grr-~~l~~~~~~~~~~~~~~~ 130 (432)
.....+.+ +++.+++|+++.+ +|++.++..+..++..|+.|+++|| +||| +.++.+....+++.+++.
T Consensus 15 ~~~~~~~l~~~~~~~~g~s~~~------~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~ 88 (437)
T TIGR00792 15 FAIVSTYLLFFYTDVLGLSAAF------VGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLF 88 (437)
T ss_pred HHHHHHHHHHHHHHccCCCHHH------HHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHH
Confidence 34444444 5677889999999 9999999999999999999999997 6774 467778888888887776
Q ss_pred hhhh------HHHHHHHHHHHhhhccchhh-HHhhhhhhc-ccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCC
Q 013991 131 LSVN------FWMAVLTRFLLGSLNGLLGP-IKAYACEIF-REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPN 202 (432)
Q Consensus 131 ~~~~------~~~l~~~r~~~G~~~g~~~~-~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~ 202 (432)
..++ ...+++.+++.+++.+...+ ..++..|.. ++++|++..++.+.+..+|..+++.+.+.+....++..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~- 167 (437)
T TIGR00792 89 TTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGD- 167 (437)
T ss_pred hCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc-
Confidence 6543 45667778888887776554 488888887 57899999999999988988888777666654111000
Q ss_pred cccccccccCccchHHHHHHHHHHHHHH-HHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccc
Q 013991 203 LFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKN 281 (432)
Q Consensus 203 ~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (432)
...+|+.++.+.+++.++.. +..+..||+++..+++++++. +.....+.++++
T Consensus 168 --------~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~------------------~~~~~~~~l~~~ 221 (437)
T TIGR00792 168 --------DKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNIEKKL------------------SLKQIFKALFKN 221 (437)
T ss_pred --------ccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcccccCC------------------CHHHHHHHHhCC
Confidence 13457776677776665543 334556765422111000000 001134567888
Q ss_pred hhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHH
Q 013991 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAG 361 (432)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 361 (432)
|+++...+..++..........+.+.|.+.. ++ ++...+.+.....++.+++. ++.+++.||+++|+....+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~i~~ii~~-~~~~~l~~r~g~~~~~~~~~ 294 (437)
T TIGR00792 222 DQLLILCLAYLFYNLAFNIKNGVQVYYFTYV-----LG-DPELFSYMGSIAIVAGLIGV-LLFPRLVKKFGRKILFAGGI 294 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhheeEeee-----cC-ChHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcHHHHHHHH
Confidence 9888877777666666555554545444432 34 45566667777777777776 68899999999999998888
Q ss_pred HHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhcccc-------ccchhhhhhHHHHH
Q 013991 362 VLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVV-------RVLTYTLSCHFWFV 427 (432)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~g~~~~~~~~~ 427 (432)
.+..++.+.+.+.. .+ . ....+...+.+++.+...+..+++.+|..| ++.+|+++|.+.+.
T Consensus 295 ~~~~~~~~~~~~~~--~~--~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 362 (437)
T TIGR00792 295 LLMVLGYLIFFFAG--SN--L-PLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFV 362 (437)
T ss_pred HHHHHHHHHHHHcc--hh--H-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHH
Confidence 77776665554332 11 1 123334445556666777888888888775 45578888887664
No 91
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.91 E-value=4e-21 Score=181.77 Aligned_cols=336 Identities=12% Similarity=0.009 Sum_probs=217.4
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHH--HHHHhHHHHHHHHhhhh-hhhccCChHHHHHHH
Q 013991 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYV--GSSFMFGRALTSVFWGL-VADRYGRKPVIIMGT 119 (432)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~--~s~~~~~~~~~~~~~G~-l~dr~Grr~~l~~~~ 119 (432)
+..+...++.+++..+...|.+|.+.++.|.+.++ +|++ .+...+...+.+|+++. ..||+||||..++.+
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~------iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~ 76 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTA------LAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPM 76 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHH
Confidence 45566778889999999999999999999999999 9997 46778888888888854 799999998876555
Q ss_pred HHH-HHHHHHHh---hhhh-HHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhh
Q 013991 120 ASV-VIFNTLFG---LSVN-FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (432)
Q Consensus 120 ~~~-~~~~~~~~---~~~~-~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 193 (432)
.+. .+.....+ ...+ ...++..-.+.++..+...+. .++..|..++++++...+....+..+|.++|+...+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l 156 (390)
T TIGR02718 77 QCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVL 156 (390)
T ss_pred HHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332 22222222 1222 223333444444555555554 77788888888888888888888889999999888888
Q ss_pred cccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCC
Q 013991 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREAT 273 (432)
Q Consensus 194 ~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (432)
.+ ..+|+.++.+.+++.++..+..++++|++++++++++ + ...
T Consensus 157 ~~----------------~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~~~--~-------------------~~~ 199 (390)
T TIGR02718 157 FG----------------KFGQRPAFLLVACVPLASLVCVLWLKDRAVASPEAPL--A-------------------RRA 199 (390)
T ss_pred HH----------------HhCHHHHHHHHHHHHHHHHHHHHHcCCCCcCccccch--h-------------------hHH
Confidence 87 4556666677777766655444555443221111000 0 011
Q ss_pred CccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhCh
Q 013991 274 PKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP 353 (432)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 353 (432)
..++.+|+|.++......++..........+.+.|..+ .|++++++|.+....+....+.+.++.+++.||+++
T Consensus 200 ~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~------~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~ 273 (390)
T TIGR02718 200 SLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD------AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGL 273 (390)
T ss_pred HHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh------cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhH
Confidence 34567788888777777777766666777777777765 489999999998887764444333689999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccc-cchhhhhhHHHHH
Q 013991 354 IMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVR-VLTYTLSCHFWFV 427 (432)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~g~~~~~~~~~ 427 (432)
++.+..+..+..+.........................+.++..+...+.......+..++ +.+|+.++.....
T Consensus 274 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 348 (390)
T TIGR02718 274 WRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQST 348 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHH
Confidence 9988877665533222221111110000011122222333334455556666666666665 7888888776644
No 92
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.90 E-value=2.9e-22 Score=174.72 Aligned_cols=354 Identities=14% Similarity=0.045 Sum_probs=233.6
Q ss_pred CchhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHH
Q 013991 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (432)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~ 118 (432)
++.........+.-..+.........|......|.+..+ ..+++.....+..+++..+|..+|++|||+.+.+.
T Consensus 76 q~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q------~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T 149 (528)
T KOG0253|consen 76 QWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQ------APLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLT 149 (528)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhh------hhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhh
Confidence 344444444455555555555556667778888988888 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhHHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCC
Q 013991 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (432)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (432)
....++..++.+.++|+..+++.|.+.|+|.|......++-.|..|..+|...+-+. ..+.+|.++...++.....
T Consensus 150 ~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~--- 225 (528)
T KOG0253|consen 150 FLVTGVFGVISGASPNFASLCVFRALWGFGVGGLPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMS--- 225 (528)
T ss_pred HHHHHHHHHhhcCCCCeehhhHHHHHHhccCCCccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHH---
Confidence 999999999999999999999999999999887333488888999999999887777 8999999999999998887
Q ss_pred cCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhh------------------
Q 013991 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESA------------------ 260 (432)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~------------------ 260 (432)
.+|||+.+ .....+..+.....+++||+|+....+.++.++.. .+++.
T Consensus 226 ----~~gwr~~l---------~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAle-tL~kiArmNg~qlplgvl~~s~~ 291 (528)
T KOG0253|consen 226 ----NFGWRYLL---------FTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALE-TLHKIARMNGKQLPLGVLESSAI 291 (528)
T ss_pred ----hhhHHHHH---------HHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHH-HHHHHHHhcCCCCCcceeeeehh
Confidence 56666554 56666666677778899999998766665554432 11100
Q ss_pred --hhhh----hh----hhccCCCCccccccchhHHH---HHHHHHHHHHHhhhHHHHHHhhhcCCCcCCC----------
Q 013991 261 --SAEV----KE----EEGREATPKKSLLKNWPLMS---SIIVYCVFSLHDMAYSEIFSLWANSPKKLGG---------- 317 (432)
Q Consensus 261 --~~~~----~~----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 317 (432)
+++. .+ ..++.......++...-.+. ....++...+.+++..-+.....+.......
T Consensus 292 ~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e 371 (528)
T KOG0253|consen 292 DRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELE 371 (528)
T ss_pred hhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHH
Confidence 0000 00 01112223334443222222 2222222223333322222222222110000
Q ss_pred c----ccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHH
Q 013991 318 L----NYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVK 393 (432)
Q Consensus 318 ~----g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (432)
. ..+...--.=..+.....+.|. ++.+++.||+|||+.+....+++.+..+++....... ...+..+..
T Consensus 372 ~~~~c~~s~~~dYrdllitslaefPGl-LIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn------~~tvllf~a 444 (528)
T KOG0253|consen 372 TRANCPLSVAKDYRDLLITSLAEFPGL-LITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRN------AYTVLLFTA 444 (528)
T ss_pred hhhcCCccchhHHHHHHHHHHhhCCch-hHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcc------hhHHHHHHH
Confidence 0 0111111112334456666775 6899999999999999999988877766654433222 122233334
Q ss_pred HhhhhhHHHHHHHHHhccccccchhhhhhH
Q 013991 394 NLLSVSIITGLFILQNRAVVRVLTYTLSCH 423 (432)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~ 423 (432)
-++..+.+.+.+.+..|..|+..|++..|.
T Consensus 445 rafisg~fqvaYvYtPEVyPTavRatgvGt 474 (528)
T KOG0253|consen 445 RAFISGAFQVAYVYTPEVYPTAVRATGVGT 474 (528)
T ss_pred HHHHhchheEEEEecCcccchhhhhcchhh
Confidence 446667778899999999999999876553
No 93
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.89 E-value=1.1e-20 Score=183.32 Aligned_cols=359 Identities=13% Similarity=0.075 Sum_probs=215.4
Q ss_pred hhHHHHHHHHHHhhccccchhhhHH-HHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhc-cCChHHHHHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMG 118 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~ 118 (432)
+.++.++...+...+..+...+.++ ++.+++|.+..+ .+++.+.+........++.|+++|| +|||+.+.++
T Consensus 21 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~------a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g 94 (500)
T PRK09584 21 KAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEAD------SITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLG 94 (500)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHH
Confidence 4466667777777777777777776 556889999988 7888887776666667899999999 5999999999
Q ss_pred HHHHHHHHHHHhhhh-hHHHHHHHHHHHhhhccchhhH-Hhhhhhhcccch--hhhhhhhHHHHHHHHHHHHHHHHhhhc
Q 013991 119 TASVVIFNTLFGLSV-NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEH--QALGLSTVSTAWGIGLIIGPALGGFLA 194 (432)
Q Consensus 119 ~~~~~~~~~~~~~~~-~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~--r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (432)
.++.+++..++++++ +.+.++++|+++|++.|...+. .+++.|++|+++ |..++++++.+.++|..+||.+++++.
T Consensus 95 ~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~ 174 (500)
T PRK09584 95 AIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLA 174 (500)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988874 5667778899999998887775 889999998643 456888889999999999999999998
Q ss_pred ccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHH----HhhcccccCCCCCC-CcchhhhH------------HH-
Q 013991 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA----AFWLPETLHRHNDD-DDSCDVSY------------DA- 256 (432)
Q Consensus 195 ~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~e~~~~~~~~-~~~~~~~~------------~~- 256 (432)
+ .+|| +..+.+.++..++.++. ...++|..+..+.+ .+...... ..
T Consensus 175 ~-------~~g~---------~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (500)
T PRK09584 175 A-------KYGW---------SVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWL 238 (500)
T ss_pred H-------hhCH---------HHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHH
Confidence 8 4444 44445555433332222 22334432111111 11111000 00
Q ss_pred hhhhhhhhh----------hhhccCCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcC----CCcCCCccccc
Q 013991 257 LESASAEVK----------EEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANS----PKKLGGLNYST 322 (432)
Q Consensus 257 ~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~g~s~ 322 (432)
..+...... ...........+.-|++ .+.... .++....+.......+.++.. .......|+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~- 315 (500)
T PRK09584 239 LHNQEIARMALGVVALGIVVIFGKEAFAMKGAARRK-MIVAFI-LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIA- 315 (500)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHH-HHHHHH-HHHHHHHHHHHHHHhccHHHHHHHHhccccccceE-
Confidence 000000000 00000000001111222 222211 112222222222233332221 1000001211
Q ss_pred chhhHHHHHHHHHHHHHHHHhH----HHHHHHhChhHHHHHHHHHHHHHHHHhhHHHhhh---hhHHHHHHHHHHHHHHh
Q 013991 323 QMVGEVLAITGFSLLVFQLSLY----PFLERILGPIMVARIAGVLTIPLLTSYPYIAMLS---GFGLAFLLNCASVVKNL 395 (432)
Q Consensus 323 ~~~g~~~~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 395 (432)
...+.+.+...+..++.. ++. +++.||.+..+.+.+++++.+++++.+....... +.....+.....++.++
T Consensus 316 i~~~~~~s~n~i~iil~~-p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ 394 (500)
T PRK09584 316 VEPEQYQALNPFWIMIGS-PILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSI 394 (500)
T ss_pred ECHHHHHHHhHHHHHHHH-HHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH
Confidence 223444555554544444 333 4555555566777788888888877766554321 11112245666777888
Q ss_pred hhhhHHHHHHHHHhccccccchhhhhhHHH
Q 013991 396 LSVSIITGLFILQNRAVVRVLTYTLSCHFW 425 (432)
Q Consensus 396 ~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~ 425 (432)
+.....|...+++.+..|++.||.+.|.++
T Consensus 395 ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~ 424 (500)
T PRK09584 395 GELMISGLGLAMVAQLVPQRLMGFIMGSWF 424 (500)
T ss_pred HHHHHhHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 999999999999999999999999999775
No 94
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.89 E-value=5.4e-21 Score=187.67 Aligned_cols=318 Identities=17% Similarity=0.133 Sum_probs=213.7
Q ss_pred HHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhh
Q 013991 69 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSL 148 (432)
Q Consensus 69 ~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~ 148 (432)
+.+..+... ..+..+++.+|..+|++++|+++||+|||++++.++++..++.++.++++|++.+++.|++.|++
T Consensus 111 ~~~c~~~~~------~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~ 184 (521)
T KOG0255|consen 111 NLVCDSSTL------VALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFF 184 (521)
T ss_pred ceeeCcHhH------HHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 445556655 88999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccchhh-HHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHH
Q 013991 149 NGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAF 227 (432)
Q Consensus 149 ~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~ 227 (432)
.+.... ...+++|++++++|+.+..+ ......+..+++..++++.. +||..+++..++.+
T Consensus 185 ~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~------------------~Wr~~~~~~~~~~~ 245 (521)
T KOG0255|consen 185 GSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR------------------DWRWLFWIISIPSG 245 (521)
T ss_pred ccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh------------------hHHHHHHHHHHHHH
Confidence 666655 59999999999999999999 77777778888888888864 35555577777777
Q ss_pred HHHHHHhhcccccCCCCCCCcchhhhH--HHhhhh-----h------hh--hhhhh---ccCCCCccccccchhHHHHHH
Q 013991 228 GVTIAAFWLPETLHRHNDDDDSCDVSY--DALESA-----S------AE--VKEEE---GREATPKKSLLKNWPLMSSII 289 (432)
Q Consensus 228 ~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~~~~~-----~------~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~ 289 (432)
+.++..++.||++++...+.+.++..+ ++..+. . .. ..+.+ .+.+.....+++.+++....+
T Consensus 246 ~~~~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~ 325 (521)
T KOG0255|consen 246 LFLLLWFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTL 325 (521)
T ss_pred HHHHHHHccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHH
Confidence 666666666799998766554432221 111100 0 00 00001 112234667777776544444
Q ss_pred HHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHHHHH
Q 013991 290 VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLT 369 (432)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 369 (432)
...+..+.......-++ ....++|.+. .......+....... ...+...++.|||.....+..+..++++
T Consensus 326 ~~~~~~~~~~~~y~gl~------~~~~~lg~~~---~~~~~~~~~~~~p~~-~~~~~~~~~~gR~~~~~~~~~~~~~~~~ 395 (521)
T KOG0255|consen 326 YLLFIWFVFSLVYYGLS------LNVSGLGGNI---YLNFTLSGLVELPAY-FRNGLLLPEFGRRPPLFLSLFLAGIGLL 395 (521)
T ss_pred HHHHHHHHHhHHHHhhh------hhhhhcCchH---HHHHHHHHHHHhhHH-HHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 33333322111111111 1111133332 223333333444443 4667888999999999999999999888
Q ss_pred HhhHHHhhhhh-HHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHH
Q 013991 370 SYPYIAMLSGF-GLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFW 425 (432)
Q Consensus 370 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~ 425 (432)
...+....... .+++.. .+..++....+...+...+|..|+..|..+.+...
T Consensus 396 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~ 448 (521)
T KOG0255|consen 396 LFGWLPDDLGGWLHWILP----LLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAIS 448 (521)
T ss_pred HHHHhhccchhHHHHHHH----HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Confidence 88877655431 122222 22233444455566889999999999987766554
No 95
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.88 E-value=1.6e-26 Score=223.13 Aligned_cols=362 Identities=17% Similarity=0.209 Sum_probs=224.6
Q ss_pred HHHHHhhccccchhhhHHHHH--HHhcCCccccc---hhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHH
Q 013991 48 IIVLCTALPISSLFPFLYFMI--KDFQIAKREED---IGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (432)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~---~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 122 (432)
++.+..+++........+... .++..+..+.+ .....++..+...++..+|+++.|.++||+|||+.+.++.++.
T Consensus 7 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~ 86 (451)
T PF00083_consen 7 LGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLM 86 (451)
T ss_pred HHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccccc
Confidence 344666666665555554333 23333332211 2244789999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhh---hHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCC
Q 013991 123 VIFNTLFGLSV---NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (432)
Q Consensus 123 ~~~~~~~~~~~---~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (432)
.++.++.++++ +++.+.++|++.|++.|...+. ..++.|..|+++|++..++.+.+..+|..++..++..+...
T Consensus 87 ~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~-- 164 (451)
T PF00083_consen 87 IIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYY-- 164 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--
Confidence 99999999999 9999999999999998887765 99999999999999999999999999999888887655331
Q ss_pred cCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhH--HHhh---hhhhhhhhh----h-
Q 013991 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSY--DALE---SASAEVKEE----E- 268 (432)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~----~- 268 (432)
.+ .+.||..+...+++.++.++...++||+|++...+++.+++.+ ++.. ..+++.++. +
T Consensus 165 -----~~------~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~ 233 (451)
T PF00083_consen 165 -----SD------NWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKE 233 (451)
T ss_pred -----cc------cccccccccccccccccccccccccccccceeccccccccccccccccccccccccccccccccccc
Confidence 11 2346666677777777666777889999998655544333221 1110 000111111 0
Q ss_pred -ccCCCCccccccchhH-HHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHH
Q 013991 269 -GREATPKKSLLKNWPL-MSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPF 346 (432)
Q Consensus 269 -~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~ 346 (432)
++....++++++++.. ........+..............|. +...+..+.+.. -......++...++. +++.+
T Consensus 234 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~--~~i~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~ 308 (451)
T PF00083_consen 234 SQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYS--PSIFENAGISNS--FLATLILGLVNFLGT-LLAIF 308 (451)
T ss_pred ccccceeeeeccccccccccccccccccccccccccccccccc--cccccccccccc--ccccccccccccccc-ccccc
Confidence 0111346667776542 1122222221111111111111111 122222455555 111222233344444 35568
Q ss_pred HHHHhChhHHHHHHHHHHHHHHHHhh--HHHhhhhh--HHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhh
Q 013991 347 LERILGPIMVARIAGVLTIPLLTSYP--YIAMLSGF--GLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSC 422 (432)
Q Consensus 347 l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~ 422 (432)
+.||+|||+++..+.....+..+.++ ........ .....+.........+..+..+..+.+..|..|.+.|++..+
T Consensus 309 ~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~ 388 (451)
T PF00083_consen 309 LIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIG 388 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence 99999999999888887776665554 11111110 111122222222233444566777888999999999998888
Q ss_pred HHHHH
Q 013991 423 HFWFV 427 (432)
Q Consensus 423 ~~~~~ 427 (432)
..+.+
T Consensus 389 ~~~~~ 393 (451)
T PF00083_consen 389 LSYAV 393 (451)
T ss_pred ccccc
Confidence 76553
No 96
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.87 E-value=3.9e-19 Score=156.01 Aligned_cols=311 Identities=16% Similarity=0.079 Sum_probs=240.8
Q ss_pred cccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhH
Q 013991 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (432)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 135 (432)
....+.|.++++.+|+|.|.+. .|+++++..+...+.+++..++++|+|.++.+..++++.++++.+-... +.
T Consensus 27 ~itsvgPLL~~Ir~~~gls~s~------aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~ 99 (395)
T COG2807 27 AITSVGPLLDEIRQDLGLSFSV------AGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GL 99 (395)
T ss_pred hhhhhhhhHHHHHHHhcccHHH------HHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cH
Confidence 4567889999999999999999 9999999999999999999999999999999999999999999998877 77
Q ss_pred HHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCcc
Q 013991 136 WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 214 (432)
Q Consensus 136 ~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~ 214 (432)
+.++.+-.+.|.+.+...+. +..+.+.+|+ +-+..++++.....+|..+++.+...+.+. ..||
T Consensus 100 ~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk-~~~~mtglYs~sl~~~aaLaa~lavpla~~------~~gW-------- 164 (395)
T COG2807 100 PLLFLGTLLAGAGIAVINVLLPSLIKRDFPK-RVGLMTGLYSTSLGAGAALAAALAVPLAQH------SGGW-------- 164 (395)
T ss_pred HHHHHHHHHHHhhHHHHHHhhhHHHHhhccc-chhhHHhHHHHHHHHHHHHHhhhhhHHHHh------hccH--------
Confidence 88899999999999998886 9999999985 568999999999999999999999999872 1234
Q ss_pred chHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHH
Q 013991 215 YFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVF 294 (432)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (432)
+.....-++++++.++. ++|...+++..+. +....+...++|||.-|...+.+.+.
T Consensus 165 -~~aL~~WAl~allAl~~--WlPq~~r~~~~~~---------------------~~~~~~~~~vw~~~~aW~vtLfmGlq 220 (395)
T COG2807 165 -RGALGFWALLALLALLI--WLPQALREQAASI---------------------ATKLVSVRKVWRSPLAWQVTLFMGLQ 220 (395)
T ss_pred -HHHHHHHHHHHHHHHHH--Hhhhccccccccc---------------------ccccccccccccCchhHHHHHHHHhh
Confidence 43334445555444433 4454322211110 01122445689999999999999999
Q ss_pred HHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHh-ChhHHHHHHHHHHHHHHHHhhH
Q 013991 295 SLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL-GPIMVARIAGVLTIPLLTSYPY 373 (432)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~ 373 (432)
.+.++....++|.++.+. |+|+.++|.+.+...+..++.+ +..+.+.+|. ++|+.......++.++...+.+
T Consensus 221 S~~~Y~~~~WLP~ili~~------G~sa~~aG~llsl~~l~~~~~~-ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~ 293 (395)
T COG2807 221 SLLYYIVIGWLPAILIDR------GLSAAEAGSLLSLMQLAQLPTA-LLIPLLARRSKNQRPLVVLALLLMLVGLVGLLL 293 (395)
T ss_pred HHHHHHHHHHHHHHHHHc------CCCHHHhhhHHHHHHHHHHHHH-HHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999885 9999999999999999999998 4788888864 5566666666666677666655
Q ss_pred HHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhcccc-ccchhhhhhHHHH
Q 013991 374 IAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVV-RVLTYTLSCHFWF 426 (432)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~g~~~~~~~~ 426 (432)
.+... .....++.|.+.++.+|.....+....+ +++.+..+|+..-
T Consensus 294 ~P~~~-------~~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg 340 (395)
T COG2807 294 APGQL-------PILWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQG 340 (395)
T ss_pred hhhhH-------HHHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhh
Confidence 54333 1111366677888888888888776654 4555566665543
No 97
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.87 E-value=5.4e-23 Score=184.72 Aligned_cols=377 Identities=14% Similarity=0.064 Sum_probs=231.8
Q ss_pred CCCchhHH---HHHHHHHHhhccccchhhhHHHHHHHh-cCCccc-cchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCC
Q 013991 37 GLPITELF---SIWIIVLCTALPISSLFPFLYFMIKDF-QIAKRE-EDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR 111 (432)
Q Consensus 37 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~-~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Gr 111 (432)
...|+.+. +...+.+.+.++...++.+.|.+...+ +.+... ...+...+.+..+..+|.++|++++|++.||+||
T Consensus 34 g~qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GR 113 (538)
T KOG0252|consen 34 GLQWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGR 113 (538)
T ss_pred chhHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 34555544 445577788888888888888776654 322111 1122337888999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhhh-------hHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHH
Q 013991 112 KPVIIMGTASVVIFNTLFGLSV-------NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGL 183 (432)
Q Consensus 112 r~~l~~~~~~~~~~~~~~~~~~-------~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~ 183 (432)
|+++...+++..+++++++++. -.+++...|++.|+|.|.-.|. .++.+|...++.||..++.+.+..+.|.
T Consensus 114 K~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gi 193 (538)
T KOG0252|consen 114 KKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGI 193 (538)
T ss_pred hhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhH
Confidence 9999999999999999887742 3578999999999999999887 8888999999999999999888888877
Q ss_pred HHHHHHHhhhcccCCcCCCccccc---ccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhh
Q 013991 184 IIGPALGGFLAQPAEKYPNLFSSE---SLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESA 260 (432)
Q Consensus 184 ~~g~~~~~~l~~~~~~~~~~~gw~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 260 (432)
..|.+++-.+....+. .++-+ ..- ..-||..+.+.+++++..+.....+||+++......++.+...++.++.
T Consensus 194 laG~ivt~Iv~~~fe~---~~~~~~~~~~l-d~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~ 269 (538)
T KOG0252|consen 194 LAGGIVALIVSAIFEK---IFNGPSTYPHL-DGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKV 269 (538)
T ss_pred hhccHHHHHHHHHHhc---cCCCCCCchHH-HHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhccccc
Confidence 7777666555432111 11111 111 3568988888888888888888889999876522111111110111110
Q ss_pred h------hhhhhhhccCCCC----ccccccc---hhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhH
Q 013991 261 S------AEVKEEEGREATP----KKSLLKN---WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGE 327 (432)
Q Consensus 261 ~------~~~~~~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~ 327 (432)
. ++..+...+.+.. +...+.. +.++.....++++-........+....+.. +|+.+...-+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~------ig~~~~~~~~ 343 (538)
T KOG0252|consen 270 LSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSA------IGVIPSANTY 343 (538)
T ss_pred cccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHh------hccCCCcchH
Confidence 0 0000111111111 1112222 223334444555444544444333333332 3555444433
Q ss_pred --------HHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHHHHHHhhHHHh-hhhhHHHHHHHHHHHHHHhhhh
Q 013991 328 --------VLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAM-LSGFGLAFLLNCASVVKNLLSV 398 (432)
Q Consensus 328 --------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 398 (432)
...+....+.+-..++...+.|++||++....++.++.+..+.++...+ ..+.....+.+.. ...++..
T Consensus 344 ~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l--~~ff~NF 421 (538)
T KOG0252|consen 344 HELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSL--TFFFGNF 421 (538)
T ss_pred HHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHH--HHHHHhc
Confidence 1111122222211245666799999999999999998888777665433 1111111222222 2222333
Q ss_pred hHHHHHHHHHhccccccchhhhhhHHH
Q 013991 399 SIITGLFILQNRAVVRVLTYTLSCHFW 425 (432)
Q Consensus 399 ~~~~~~~~~~~~~~p~~~~g~~~~~~~ 425 (432)
+.........+|..|.+.|++..|+..
T Consensus 422 GPn~ttfivpaE~FParvR~t~hGIsA 448 (538)
T KOG0252|consen 422 GPNATTFIVPAEIFPARVRSTCHGISA 448 (538)
T ss_pred CCCceeEEeehhhchHHHhhhhhhHHH
Confidence 444455566799999999999888754
No 98
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.86 E-value=1e-18 Score=163.48 Aligned_cols=336 Identities=16% Similarity=0.205 Sum_probs=239.2
Q ss_pred HHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccC-ChHHHHHHHHHHH
Q 013991 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-RKPVIIMGTASVV 123 (432)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~G-rr~~l~~~~~~~~ 123 (432)
.+....++.....+...|.++.+.++.|.|..| +|.+.+...+...++++++|.++||.+ +|+.+.+..++.+
T Consensus 6 rLs~~~f~~f~~~G~~~p~~~~~L~~~G~s~~q------IG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~ 79 (400)
T PF03825_consen 6 RLSLMYFLYFFAYGAFLPYLPLYLESRGFSGTQ------IGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSA 79 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHH
Confidence 345566677777788889999999999999999 999999999999999999999999987 5778878778777
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHH-HhhhcccCCcCC
Q 013991 124 IFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPAL-GGFLAQPAEKYP 201 (432)
Q Consensus 124 ~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~-~~~l~~~~~~~~ 201 (432)
+........++++.+++.-++..+......|. .++..+... ++++-.|-.....++|.+++... ++.+..
T Consensus 80 ~~~~~~~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~------ 151 (400)
T PF03825_consen 80 LALLLLAFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGG------ 151 (400)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHh------
Confidence 77777777888988888777777766655554 666666554 34556667777778888777554 223322
Q ss_pred CcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccc
Q 013991 202 NLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKN 281 (432)
Q Consensus 202 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (432)
..++ .....++++.+...++.....+.+|+.|++++++++.++ ....+..+++|+
T Consensus 152 -~~~~------~~~~~~~~i~~~~~~ll~~~~l~lp~~~~~~~~~~~~~~------------------~~~~~~~~llk~ 206 (400)
T PF03825_consen 152 -YLGI------SGTSLIFYIAAILSLLLAGFALFLPKTPPKRSAKESVKK------------------LLGLDALKLLKN 206 (400)
T ss_pred -hhcc------ccccHHHHHHHHHHHHHHHHHHhCCCCccccccCCCccc------------------ccchHHHHHhcC
Confidence 1111 111122344444444443445567877633322211111 111233568999
Q ss_pred hhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcc-cccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHH
Q 013991 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLN-YSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIA 360 (432)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 360 (432)
|++....+..++.......+..+.+.|+++. | .+....+.+.++..+.-++. +...+++.+|++.++++.++
T Consensus 207 ~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~------gg~~~~~~g~~~~l~~~aEi~~-f~~~~~~~~r~g~~~ll~~a 279 (400)
T PF03825_consen 207 PRFLVFLLAAFLIGISHAAYYTFFSIYLQEL------GGYSGSTIGILWALGVVAEIPF-FFFSGRFLKRFGIKWLLLLA 279 (400)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------ccchhhHHHHHHHHHHHHHHHH-HHHHHHHHHhcCHHHHHHHH
Confidence 9999888888888888888888999998874 5 67777888777766666665 46889999999999999999
Q ss_pred HHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 361 GVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
.+..++=..++.+..... ...+........+.|...+........++.+.+|++.|+++.+++..+
T Consensus 280 ~~~~~vR~~l~a~~~~~~-~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~ 345 (400)
T PF03825_consen 280 LVAYAVRWLLYAYFSDPW-PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSAL 345 (400)
T ss_pred HHHHHHHHHHHHHhcCCc-HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHH
Confidence 998888877776652221 122223334455677788888889999999999999999999988754
No 99
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.86 E-value=1.4e-18 Score=165.16 Aligned_cols=361 Identities=13% Similarity=0.105 Sum_probs=209.1
Q ss_pred chhHHHHHHHHHHhhccccchhhhHHHH-HHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhcc-CChHHHHH
Q 013991 40 ITELFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-GRKPVIIM 117 (432)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~ 117 (432)
.+.++.++...+...+..+.....+|.+ .+++|.++.+ .+.+.+.+.....++.+++|+++||+ ||||++++
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~------a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~ili 81 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNH------AYELFSAYCSLVYVTPILGGFLADKVLGNRMAVML 81 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHH
Confidence 3556666666777777777777777755 5678999998 99999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHhhhh-hHHHHHHHHHHHhhhccchhhH-Hhhhhhhcccc--hhhhhhhhHHHHHHHHHHHHHHHHhhh
Q 013991 118 GTASVVIFNTLFGLSV-NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE--HQALGLSTVSTAWGIGLIIGPALGGFL 193 (432)
Q Consensus 118 ~~~~~~~~~~~~~~~~-~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l 193 (432)
+.++..++.++.+..+ +...++++..+.+++.|...+. .++++|.+|++ +|..++++.....++|..++|.+.+++
T Consensus 82 G~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L 161 (493)
T PRK15462 82 GALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYA 161 (493)
T ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHH
Confidence 9999999987776543 2233444444455566666564 88999999975 699999999999999999999999999
Q ss_pred cccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCC---CCCCcchhhhHH--------------H
Q 013991 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRH---NDDDDSCDVSYD--------------A 256 (432)
Q Consensus 194 ~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~---~~~~~~~~~~~~--------------~ 256 (432)
.+ .++|+..|.++++..++.++..+..++...+. ++++.+++.... .
T Consensus 162 ~~----------------~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (493)
T PRK15462 162 QE----------------EYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPA 225 (493)
T ss_pred Hh----------------hhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 87 33444444555543333333332222111110 011110000000 0
Q ss_pred hhhh--hhhhhh---------------hhccCCCCccccccchh--HHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCC
Q 013991 257 LESA--SAEVKE---------------EEGREATPKKSLLKNWP--LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGG 317 (432)
Q Consensus 257 ~~~~--~~~~~~---------------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (432)
.... .++... .....+.+..+ |+|- +....+...++...+....+.+..|..+.....-
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e--r~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~ 303 (493)
T PRK15462 226 LITVLFWKEWSVYALIVATIIGLGVLAKIYRKAENQKQ--RKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDM 303 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH--HhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchh
Confidence 0000 000000 00000001001 1111 1112222222222223333344445443221111
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhC--hh---HH--HHHHHHHHHHHHHHhhHHHhhh---hhHHHHHHH
Q 013991 318 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG--PI---MV--ARIAGVLTIPLLTSYPYIAMLS---GFGLAFLLN 387 (432)
Q Consensus 318 ~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~---~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 387 (432)
+|++ .......+...+..++.+ ++..++=.|.. +| .. ..+++++.+++++.+....... +.....++.
T Consensus 304 ~g~~-ip~~~~qslNp~~ii~l~-P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~ 381 (493)
T PRK15462 304 FGYT-VPTAMFQSINAFAVMLCG-VFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMV 381 (493)
T ss_pred ccee-eCHHHHHhHhHHHHHHHH-HHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHH
Confidence 2332 123444455555555444 33333322221 11 11 3466666677766655433221 112333456
Q ss_pred HHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHH
Q 013991 388 CASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWF 426 (432)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~ 426 (432)
....+.+.+.....|...+++++..|++.+|...|+++.
T Consensus 382 ~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l 420 (493)
T PRK15462 382 LGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYML 420 (493)
T ss_pred HHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHH
Confidence 666777888889999999999999999999999999876
No 100
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.86 E-value=7.3e-19 Score=166.37 Aligned_cols=366 Identities=15% Similarity=0.126 Sum_probs=227.9
Q ss_pred CchhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhh----ccCChHH
Q 013991 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGRKPV 114 (432)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~d----r~Grr~~ 114 (432)
|.++++.+....+...+......+..+.+.+++|.+... .+++..+..+...+.+|+.|.++| |+||||.
T Consensus 2 ~~~~li~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~------~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp 75 (477)
T TIGR01301 2 PLRKLLRVASVAAGVQFGWALQLSLLTPYVQELGIPHAW------ASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRP 75 (477)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHH
Confidence 345666677777777778888888888889999999988 999999999999999999999999 5999999
Q ss_pred HHHH-HHHHHHHHHHHhhhhhHH-----------------HHHHHHHHHhhhccch-hhHHhhhhhhcccchh--hhhhh
Q 013991 115 IIMG-TASVVIFNTLFGLSVNFW-----------------MAVLTRFLLGSLNGLL-GPIKAYACEIFREEHQ--ALGLS 173 (432)
Q Consensus 115 l~~~-~~~~~~~~~~~~~~~~~~-----------------~l~~~r~~~G~~~g~~-~~~~~~i~~~~~~~~r--~~~~~ 173 (432)
++++ .+...++.++++++++.+ ..+++-.+..++.... .|..++++|.+|+++| +.+.+
T Consensus 76 ~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~ 155 (477)
T TIGR01301 76 FIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANA 155 (477)
T ss_pred HHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHH
Confidence 8775 666666667777766543 2222223334455544 4459999999998866 57999
Q ss_pred hHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccc--cc--cCccchHHHHHHHHHHHHH-HHHHhhcccccCCCCCCCc
Q 013991 174 TVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSES--LF--GKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDD 248 (432)
Q Consensus 174 ~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~--~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~ 248 (432)
+.+.+.++|.++|+.++++..... .+++.. .. -..+.+..|++.++..++. ++..+..||.+...+++.+
T Consensus 156 ~~~~~~~lG~ilg~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~ 230 (477)
T TIGR01301 156 YFSFFMAIGNVLGYAAGAYSGLYK-----IFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFI 230 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHH-----hcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccch
Confidence 999999999999999998762100 111100 00 0235677777777766654 4456678887643221110
Q ss_pred chhhhHHHhhhhhhhhhhhhccCCCCcccccc-----chhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCC----cc
Q 013991 249 SCDVSYDALESASAEVKEEEGREATPKKSLLK-----NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGG----LN 319 (432)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g 319 (432)
++ +.++.. +.+.....+++++ .+.++..++..++..+..+.+..+.+.|..+....++ ..
T Consensus 231 ~~-----~~~~~~------~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~ 299 (477)
T TIGR01301 231 NS-----EAAPPS------KHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAK 299 (477)
T ss_pred hh-----hccccc------ccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhH
Confidence 00 000000 0000011222222 2455666666666655555555555544332111100 00
Q ss_pred cccc-hhhH-HHHHHHHHHHHHHHHhHHHHHHHhCh-hHHHHHHHHHHHHHHHHhhHHHhhhh---------------hH
Q 013991 320 YSTQ-MVGE-VLAITGFSLLVFQLSLYPFLERILGP-IMVARIAGVLTIPLLTSYPYIAMLSG---------------FG 381 (432)
Q Consensus 320 ~s~~-~~g~-~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~ 381 (432)
++.. ..|. -.....+...+.+ ++..++.+|+|+ |+...++.++.++++....+.....+ ..
T Consensus 300 y~~gvr~G~~~l~~~s~~~~i~s-~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 378 (477)
T TIGR01301 300 YDDGVRAGAFGLMLNSVVLGITS-IGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTG 378 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchh
Confidence 1000 0122 2333444444555 467888999985 67778887887777777765543111 01
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHhccccc--cchhhhhhHHHHH
Q 013991 382 LAFLLNCASVVKNLLSVSIITGLFILQNRAVVR--VLTYTLSCHFWFV 427 (432)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~g~~~~~~~~~ 427 (432)
.....++.....|+..+..+...++++++..|+ +..|...|+++..
T Consensus 379 ~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~ 426 (477)
T TIGR01301 379 IKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLA 426 (477)
T ss_pred hHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHH
Confidence 123455566677888888899999999999995 4558888888764
No 101
>PRK09669 putative symporter YagG; Provisional
Probab=99.84 E-value=2e-18 Score=166.05 Aligned_cols=330 Identities=16% Similarity=0.069 Sum_probs=200.4
Q ss_pred CCchhHHHHHHHHHHhhccccchhhhH-HHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhc----cCCh
Q 013991 38 LPITELFSIWIIVLCTALPISSLFPFL-YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRK 112 (432)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr----~Grr 112 (432)
.++++.+.-.+..+...+........+ +++.+++|++..+ +|.+.++..+..++..|+.|.++|| +|||
T Consensus 6 l~~~~~~~yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~------~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grr 79 (444)
T PRK09669 6 LTTKDKIGYGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAI------MGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQF 79 (444)
T ss_pred ccHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHcccceeeEeeecCCCCCCCc
Confidence 344444433334333333333344444 5778889999999 9999999999999999999999998 7874
Q ss_pred -HHHHHHHHHHHHHHHHHhhhh------hHHHHHHHHHHHhhhccchh-hHHhhhhhhc-ccchhhhhhhhHHHHHHHHH
Q 013991 113 -PVIIMGTASVVIFNTLFGLSV------NFWMAVLTRFLLGSLNGLLG-PIKAYACEIF-REEHQALGLSTVSTAWGIGL 183 (432)
Q Consensus 113 -~~l~~~~~~~~~~~~~~~~~~------~~~~l~~~r~~~G~~~g~~~-~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~ 183 (432)
+.++.+.+..+++.++....+ ..+.+++..++.+.+..... |..++.+|+. ++++|.+..+.......+|.
T Consensus 80 rp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~ 159 (444)
T PRK09669 80 RPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGG 159 (444)
T ss_pred chhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHH
Confidence 556677777777765554443 24555666666666544444 4488899988 56889998888888888888
Q ss_pred HHHHHHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHH-HHhhcccccCCCCCCCcchhhhHHHhhhhhh
Q 013991 184 IIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESASA 262 (432)
Q Consensus 184 ~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 262 (432)
.+++.+...+... ++.. .. +.+|+..+.+.+++.++..+ ..+..+|..+..+++ + .
T Consensus 160 ~i~~~~~~pl~~~-------~~~~-~~-~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~~~~-~--~----------- 216 (444)
T PRK09669 160 LIVSVIALPLVDI-------LGKG-DE-QKGYFYAMMVMGLLGVVLFFCCFFMTKERYTPEVDN-S--S----------- 216 (444)
T ss_pred HHHHHHHHHHHHH-------hCCC-ch-hhhHHHHHHHHHHHHHHHHHHHhCCeEEecCCCCcC-C--C-----------
Confidence 8887766555431 1110 00 34566655666655554433 334445532221100 0 0
Q ss_pred hhhhhhccCCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHH
Q 013991 263 EVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLS 342 (432)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~ 342 (432)
+.....+..+||++++......++............+.|.... ++ ++...+.+.....+..+++. +
T Consensus 217 -------~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~-----~~-~~~~~~~~~~~~~i~~ii~~-~ 282 (444)
T PRK09669 217 -------SVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYV-----LL-RPDLATLFLVTGMIAGLFGA-L 282 (444)
T ss_pred -------CHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeee-----cC-CHHHHHHHHHHHHHHHHHHH-H
Confidence 0112455678899988877766665554444444333333222 22 23333444444445555554 6
Q ss_pred hHHHHHHHhChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccc
Q 013991 343 LYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVR 414 (432)
Q Consensus 343 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 414 (432)
+.+++.||+++|+....+.....+....+.+... . ....+.+..++.+++.+...+..+++++|.+|.
T Consensus 283 ~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~ 350 (444)
T PRK09669 283 LSERLLGKFDRVRAFKWTIVAFVILSALIFFIPP-S---NVWLIFALNILFNFIQNLTTPLQWSMFSDVVDY 350 (444)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCc-c---hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 8889999999999988777655543322222211 1 112234445566777888889999999998873
No 102
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.83 E-value=1.6e-20 Score=158.29 Aligned_cols=342 Identities=13% Similarity=0.094 Sum_probs=232.0
Q ss_pred HHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhc-cCChHHHHHHHHHH
Q 013991 44 FSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMGTASV 122 (432)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~ 122 (432)
...++..|..++.+........++.+|.+++.++ ..++.+.|+...++-+++.|++.|| +|-|..-++-++..
T Consensus 47 v~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~ak------ftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv 120 (459)
T KOG4686|consen 47 VFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAK------FTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFV 120 (459)
T ss_pred HHHHHhcccceeecCCchhhhhhhhcccccceee------eeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHH
Confidence 3455566667777777778888888999999988 9999999999999999999999996 77777777777777
Q ss_pred HHHHHHHhh---hhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCC
Q 013991 123 VIFNTLFGL---SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (432)
Q Consensus 123 ~~~~~~~~~---~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (432)
.++.+.++. .+.+|++..+|++.|+|+-...++ ..+...++..|+-+.++|+......+|..+--.+.+++.+..+
T Consensus 121 ~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~ 200 (459)
T KOG4686|consen 121 FLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMG 200 (459)
T ss_pred HHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHH
Confidence 777777754 789999999999999987777776 9999999999999999999999999999988888888877433
Q ss_pred cCCCcccccccccCccchHHH-HHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhh-ccCC-CCc
Q 013991 199 KYPNLFSSESLFGKFPYFLPC-LCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEE-GREA-TPK 275 (432)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~ 275 (432)
..-...|... .+.+..+ ...+...++..+..-+..+..+ + .-+.++.. .+.+ ...
T Consensus 201 ~~~~~~ghT~----LG~~l~~~~~tc~~slical~lg~~D~rAe--------------r----ilh~e~g~~Ge~pkLtd 258 (459)
T KOG4686|consen 201 RMFPGVGHTL----LGLWLCFEVKTCKQSLICALSLGLSDDRAE--------------R----ILHLEEGFLGEEPKLTD 258 (459)
T ss_pred HhcccchHHH----HHHHHHHHHHHHHHHHHHHHHhhhhhhHHH--------------H----HHhhhcCcccCCccccc
Confidence 2110011000 0000000 0000111111111111111000 0 00000000 0011 111
Q ss_pred cccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhH
Q 013991 276 KSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIM 355 (432)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 355 (432)
..-+ .|++|...+++.+++....-+...-|.++++. +|+|+..++.+.+.......+.+ ++.+.++||.|++-
T Consensus 259 v~~f-~ppfw~~~iicv~yyva~fPFi~lg~~fF~~r-----fGlS~~~a~~i~s~vy~Isav~s-pvfg~i~Dk~G~n~ 331 (459)
T KOG4686|consen 259 VNTF-YPPFWVLVIICVLYYVAWFPFITLGPMFFQKR-----FGLSAVSAGNILSTVYGISAVLS-PVFGAISDKYGFNL 331 (459)
T ss_pred cccc-CccHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-----hCCChhhccchhhhhhhhhhhhh-hhHHHhHhhhccee
Confidence 1112 37888888888888888777877778888776 89999999999998888888877 78999999999887
Q ss_pred HHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 356 VARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
..+.+..+..+.--...+.+..+ .+....+.|......-...+.+++..+|+++.|+++|..+-.
T Consensus 332 ~wv~~a~~~tl~~H~~l~Ft~ls-------Py~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsI 396 (459)
T KOG4686|consen 332 WWVASACILTLLGHSGLFFTFLS-------PYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSI 396 (459)
T ss_pred hhHHHHHHHHHHHhhhHHhhhcc-------HHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHH
Confidence 76665554433322222222222 445555666666666666888899999999999999987643
No 103
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.83 E-value=2.3e-18 Score=166.70 Aligned_cols=335 Identities=13% Similarity=0.098 Sum_probs=205.1
Q ss_pred hhHHHHHHHHHHhhccccchhhhHH-HHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhh----ccCC-hHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGR-KPV 114 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~d----r~Gr-r~~ 114 (432)
++.+.-.++.+...+......+.++ ++.+.+|++... +|.+..+..+.-++..|+.|.++| |+|| |+.
T Consensus 6 ~~~~~yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~------vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~ 79 (473)
T PRK10429 6 TTKLSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGL------VGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPW 79 (473)
T ss_pred hHHHhhccchhHHhHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchh
Confidence 3333334444445555555666554 666778999999 999999999999999999999999 6698 566
Q ss_pred HHHHHHHHHHHHHHHhhhh------hHHHHHHHHHHHhhhccchhh-HHhhhhhhc-ccchhhhhhhhHHHHHHHHHHHH
Q 013991 115 IIMGTASVVIFNTLFGLSV------NFWMAVLTRFLLGSLNGLLGP-IKAYACEIF-REEHQALGLSTVSTAWGIGLIIG 186 (432)
Q Consensus 115 l~~~~~~~~~~~~~~~~~~------~~~~l~~~r~~~G~~~g~~~~-~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g 186 (432)
++++.+..+++..++...+ .+..+++..++.+++.....+ ..++..|.. ++++|.+..+.-..+.++|..+.
T Consensus 80 il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~ 159 (473)
T PRK10429 80 ILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVT 159 (473)
T ss_pred HhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 7778877777765554322 133455555666666655555 488899998 58999999888777777776666
Q ss_pred HHHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHH-HHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhh
Q 013991 187 PALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVK 265 (432)
Q Consensus 187 ~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (432)
+.+...+.+ .+|... ...+|+....+.+++.++.. +..+..||.+.....+.++++
T Consensus 160 ~~~~~~~~~-------~~g~~~--~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~-------------- 216 (473)
T PRK10429 160 AGFTLPFVN-------YVGGGD--RGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAEGS-------------- 216 (473)
T ss_pred HHHHHHHHH-------HhCCCc--hhhhHHHHHHHHHHHHHHHHHHHHcCceecCCcccccccccc--------------
Confidence 655544432 111100 02234544455555444433 333446665322111100000
Q ss_pred hhhccCCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHH
Q 013991 266 EEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYP 345 (432)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~ 345 (432)
+.+.....+.+++|++++..+...++..........+.+.|.+.. .+ +....+.+....++..+++. ++.+
T Consensus 217 --~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~-----~~-~~~~~~~~~~~~~i~~ii~~-~~~~ 287 (473)
T PRK10429 217 --HLTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYV-----IG-DADLFPYYLSYAGAANLVTL-ILFP 287 (473)
T ss_pred --CCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEE-----CC-CHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 000011234567888888877777777666555555555444332 22 44556666666667777776 6889
Q ss_pred HHHHHhChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccc
Q 013991 346 FLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVR 414 (432)
Q Consensus 346 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 414 (432)
++.||+|+|+.+.++..+.+++.+.+........ .....+.+...+.+++.+...+...++++|.+|.
T Consensus 288 ~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~ 355 (473)
T PRK10429 288 RLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAP-HNALLIVIAGILLNIGTALFWVLQVIMVADTVDY 355 (473)
T ss_pred HHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 9999999999988777765555444332211111 1122334444556667777778888899998773
No 104
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.83 E-value=4.8e-19 Score=170.33 Aligned_cols=356 Identities=13% Similarity=0.045 Sum_probs=220.6
Q ss_pred CchhHHHHHHHHHHhhccccchh-hhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccC-----Ch
Q 013991 39 PITELFSIWIIVLCTALPISSLF-PFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-----RK 112 (432)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~G-----rr 112 (432)
+...+..+...++..++. .... ...+.+.+++|++.++ ++...+...+...+-.+ +|+++||++ ||
T Consensus 24 ~~~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~------i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr 95 (468)
T TIGR00788 24 PRVVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGAR------YQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKR 95 (468)
T ss_pred cchHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccch
Confidence 334455666677778887 4444 4445666789999999 99999999999888555 999999998 77
Q ss_pred HHHHHHHHHHH-HHHHHHhhhhhHHHHH-HHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHH---HHHHHHHHHH
Q 013991 113 PVIIMGTASVV-IFNTLFGLSVNFWMAV-LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVS---TAWGIGLIIG 186 (432)
Q Consensus 113 ~~l~~~~~~~~-~~~~~~~~~~~~~~l~-~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~---~~~~~g~~~g 186 (432)
+.++++.++.. ++....+..++..... +..++.+++.+...++ -++..|..+ +++....+..+ ...++|.++|
T Consensus 96 ~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg 174 (468)
T TIGR00788 96 WYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLIS 174 (468)
T ss_pred HHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHH
Confidence 88888876663 4434444444544444 4778888887877665 999999998 55544433333 3345899999
Q ss_pred HHHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhh
Q 013991 187 PALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKE 266 (432)
Q Consensus 187 ~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (432)
+.++|.+.+ ..+|+..+.+.+++.++..+...+++|+++....+.++.+.... ........+
T Consensus 175 ~~l~G~l~~----------------~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~~--~~~~~~~~~ 236 (468)
T TIGR00788 175 SLLGGPLLD----------------KTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMNM--ALLTLGVLA 236 (468)
T ss_pred HHHHHHHHH----------------hcCcchHHHHHHHHHHHHHHHHHhcccccccccccccccchhhh--hhhhhhHHH
Confidence 999999987 34455555776666666555567778864211111100000000 000000000
Q ss_pred hhccCCCCccccccchhHHHHHHHHHH-HHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHH
Q 013991 267 EEGREATPKKSLLKNWPLMSSIIVYCV-FSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYP 345 (432)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~ 345 (432)
..++.....+..+++|.++...+..++ +...... ..+.|+.++ ..+|+++...|......+++.+++. ...+
T Consensus 237 ~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~---~~~~f~~~~---~~lG~s~~~~G~~~~~~~v~~i~g~-~~~~ 309 (468)
T TIGR00788 237 NVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGA---SGSVFCATT---QCLPGGPSFSGMSKVVGNLGSLCGV-GGYD 309 (468)
T ss_pred HHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCC---CceeEEEEc---ccCCCCcchhhhHHHHHHHHHHHHH-HHHH
Confidence 000111123344667777765544444 2211111 111121111 2379999999999999999998887 4777
Q ss_pred HHHHHhChhHHHHHHHHHHHHHHHHhhHHHhhhh----hHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhh
Q 013991 346 FLERILGPIMVARIAGVLTIPLLTSYPYIAMLSG----FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLS 421 (432)
Q Consensus 346 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~ 421 (432)
+..+|++.|+++.++.++..++...........+ ............+.++..+........++.+..|++.+|+.+
T Consensus 310 ~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~ 389 (468)
T TIGR00788 310 RFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVF 389 (468)
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHH
Confidence 7778999999999888887776544321110000 000112333344555566666677799999999999999999
Q ss_pred hHHHHHh
Q 013991 422 CHFWFVK 428 (432)
Q Consensus 422 ~~~~~~~ 428 (432)
+++...+
T Consensus 390 al~~s~~ 396 (468)
T TIGR00788 390 ALLASIL 396 (468)
T ss_pred HHHHHHH
Confidence 9987764
No 105
>PTZ00207 hypothetical protein; Provisional
Probab=99.82 E-value=9.6e-18 Score=162.03 Aligned_cols=129 Identities=13% Similarity=0.151 Sum_probs=108.9
Q ss_pred cchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhh-----
Q 013991 58 SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS----- 132 (432)
Q Consensus 58 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----- 132 (432)
+..+...+.+.+++|.+..+ .+++.+.. .....++++.|++.||+|||+++.++.+++.++.++++++
T Consensus 44 y~fsv~s~~L~~~lgls~~~------l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i 116 (591)
T PTZ00207 44 YAFNLISGAMQARYNLTQRD------LSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVI 116 (591)
T ss_pred HHHHHHHHHHHHHhCcCHHH------HHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 34556678899999999998 88888764 3445678889999999999999999999999999999987
Q ss_pred -hhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHH-HHHHHhhhc
Q 013991 133 -VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLII-GPALGGFLA 194 (432)
Q Consensus 133 -~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~~~~~l~ 194 (432)
++++.+++.|++.|+|.+...+. ...+.+++| ++||++.|+...+.++|.++ +++..+++.
T Consensus 117 ~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~ 180 (591)
T PTZ00207 117 EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS 180 (591)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999998877664 778888886 78999999999999999975 555555543
No 106
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.81 E-value=1e-18 Score=167.31 Aligned_cols=321 Identities=14% Similarity=0.089 Sum_probs=226.8
Q ss_pred hhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhh----ccCChHH-HHHHHHHHHHHHHHHhhh-h--
Q 013991 62 PFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD----RYGRKPV-IIMGTASVVIFNTLFGLS-V-- 133 (432)
Q Consensus 62 ~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~d----r~Grr~~-l~~~~~~~~~~~~~~~~~-~-- 133 (432)
...+++.+.+|+++.. .|.+..+..+..++..|+.|.++| |+||||. ++++.+..+++.+++... +
T Consensus 23 ~~~~f~~~~~gl~~~~------~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~ 96 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPAL------AGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAG 96 (428)
T ss_pred HHHHHHHHHcCCCHHH------HHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccch
Confidence 3346777888999998 999999999999999999999999 8997654 567888888888777765 3
Q ss_pred -----hHHHHHHHHHHHhhhccchhhH-Hhhhhhhcc-cchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccc
Q 013991 134 -----NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSS 206 (432)
Q Consensus 134 -----~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw 206 (432)
....+.+..++..++....... .++..|..+ +++|.+..+.-+.+..+|..+...+.+.+.+..+ .
T Consensus 97 ~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g-------~ 169 (428)
T PF13347_consen 97 LSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFG-------G 169 (428)
T ss_pred hhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhc-------c
Confidence 2234566666667776666554 899999998 5789999999999999988877777777765222 1
Q ss_pred cccccCccchHHHHHHHHHHHHH-HHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccchhHH
Q 013991 207 ESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLM 285 (432)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (432)
... ..+|+....+.+++.++. ++..+..+|.++..+++++ +.+-....++++|||+++
T Consensus 170 ~~~--~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~-------------------~~~~~~~~~~~~~nr~~~ 228 (428)
T PF13347_consen 170 GDT--SNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEK-------------------KISLRDSLRSLFRNRPFR 228 (428)
T ss_pred Ccc--chHHHHHHHHHHHHHHHHhhhhhheeeecccccccccc-------------------ccccccchhhhcccchHH
Confidence 100 124666666666666554 3445566772211111111 112234577889999999
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHH
Q 013991 286 SSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTI 365 (432)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 365 (432)
...+..++............+.|.+.. +|.+ ...+.+.....+..+++. ++.+++.||+|+|+.+..+..+.+
T Consensus 229 ~l~~~~~~~~~~~~~~~~~~~y~~~~v-----l~~~-~~~~~~~~~~~~~~~v~~-~~~~~l~~r~gk~~~~~~~~~~~~ 301 (428)
T PF13347_consen 229 ILLLAFFLQWLAFALMNTFLPYYFTYV-----LGNE-GLISIFMLIFFVASIVGS-PLWGRLSKRFGKKKVYIIGLLLAA 301 (428)
T ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHHH-----hcCc-hhhHHHHHHHHHHHHHHH-HHHHHHHHHccceeehhhhHHHHH
Confidence 988888887777777777777666665 3433 456666677777777776 688999999999999999999988
Q ss_pred HHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccc-------hhhhhhHHHHH
Q 013991 366 PLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVL-------TYTLSCHFWFV 427 (432)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-------~g~~~~~~~~~ 427 (432)
++.+++.+.... .....++...+.+.+.+.......++.+|..+.++ .|..++.+.+.
T Consensus 302 ~~~~~~~~~~~~----~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~ 366 (428)
T PF13347_consen 302 LGFLLLFFLGPG----SPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFF 366 (428)
T ss_pred HHHHHHHHHHhh----hHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhh
Confidence 887776666421 12345566667777888888889999999887432 35555555443
No 107
>PRK09848 glucuronide transporter; Provisional
Probab=99.80 E-value=3.8e-17 Score=157.46 Aligned_cols=339 Identities=17% Similarity=0.126 Sum_probs=203.2
Q ss_pred CCchhHHHHHHHHHHhhccccchhhhH-HHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhcc----CCh
Q 013991 38 LPITELFSIWIIVLCTALPISSLFPFL-YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY----GRK 112 (432)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~----Grr 112 (432)
.++++.+.-.+..+...+......+++ +++.+.+|++..+ +|.+.+...+..++..|+.|+++||. |||
T Consensus 5 ~~~~~~~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~------~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~ 78 (448)
T PRK09848 5 LSWRTIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAA------AGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKF 78 (448)
T ss_pred ccHHHHHhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHhhhhheeeeecCCCCCcCc
Confidence 344455444445555555555555555 4667778999999 99999999999999999999999996 777
Q ss_pred HHH-HHHHHHHHHHHHHH-hhh----h--hHHHHHHHHHHHhhhccchhh-HHhhhhhhcc-cchhhhhhhhHHHHHH--
Q 013991 113 PVI-IMGTASVVIFNTLF-GLS----V--NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFR-EEHQALGLSTVSTAWG-- 180 (432)
Q Consensus 113 ~~l-~~~~~~~~~~~~~~-~~~----~--~~~~l~~~r~~~G~~~g~~~~-~~~~i~~~~~-~~~r~~~~~~~~~~~~-- 180 (432)
|.. .++.+...+..++. ... + ..+..++..++.+++.+...+ ..++..|..+ +++|.+..+.-..+.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~ 158 (448)
T PRK09848 79 RPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLT 158 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHH
Confidence 654 55555454444432 221 1 223344445666776666654 3666666664 5678877665544333
Q ss_pred ---HHHHHHHHHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHH-HHHHhhcccccCCCCCCCcchhhhHHH
Q 013991 181 ---IGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDA 256 (432)
Q Consensus 181 ---~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~ 256 (432)
++..++|.+++.... .. ...|.....+.+++.++. ++.....||+++.+.++. .
T Consensus 159 ~~~~~~~~~p~i~~~~g~-------~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~~~---~----- 216 (448)
T PRK09848 159 FVCLAFLIGPSIKNSSPE-------EM-------VSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQP---S----- 216 (448)
T ss_pred HHHHHHHHHHHHHHhCCC-------ch-------hhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCccCC---C-----
Confidence 455556666543321 00 001111112222222222 222334555432211100 0
Q ss_pred hhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHH
Q 013991 257 LESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSL 336 (432)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~ 336 (432)
....++.++|||+++...+..++............+.|.++. +|.++...+.......++.
T Consensus 217 --------------~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~ 277 (448)
T PRK09848 217 --------------LKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYV-----LNDTGLFTVLVLVQNLVGT 277 (448)
T ss_pred --------------HHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeee-----cCChHHHHHHHHHHHHHHH
Confidence 011355688999998888777777776666666667666654 5666655554444444555
Q ss_pred HHHHHHhHHHHHHHhChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhcccccc-
Q 013991 337 LVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRV- 415 (432)
Q Consensus 337 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~- 415 (432)
+++. ++.+++.||+++++.+.++..+..++.+.+.+... . ..+ ...+...+.+++.+...+...++.++..|.+
T Consensus 278 ~~~~-~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~-~--~~~-~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~ 352 (448)
T PRK09848 278 VASA-PLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSV-W--SLP-VALVALAIASIGQGVTMTVMWALEADTVEYGE 352 (448)
T ss_pred HHHH-HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCc-h--hHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhH
Confidence 5665 68899999999999999988877776665543221 1 112 2334445566677777888888988888754
Q ss_pred ------chhhhhhHHHHHh
Q 013991 416 ------LTYTLSCHFWFVK 428 (432)
Q Consensus 416 ------~~g~~~~~~~~~~ 428 (432)
.+|..++++.+.+
T Consensus 353 ~~~g~r~~G~~~~~~~~~~ 371 (448)
T PRK09848 353 YLTGVRIEGLTYSLFSFTR 371 (448)
T ss_pred HhhCccchhHHHHHHHHHH
Confidence 3478888877754
No 108
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.79 E-value=5.2e-17 Score=149.18 Aligned_cols=337 Identities=15% Similarity=0.124 Sum_probs=208.8
Q ss_pred chhHHHHHHHHHHhhccccchhhhHHHHHHH-hcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHH
Q 013991 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (432)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~ 118 (432)
++..+......+...+..+...|..+...++ .|++.++ +|.+.++..+...+.+|+.|.++||.|.||-++..
T Consensus 6 ~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~------iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~ 79 (412)
T PF01306_consen 6 NKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTE------IGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWF 79 (412)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH------HHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHH------HHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHH
Confidence 3556666777777777888889999877764 8999999 99999999999999999999999999976655443
Q ss_pred HHHHH--HHH-HHHhhhhhH-HHHHHHHHHHhhhccc----hhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHH
Q 013991 119 TASVV--IFN-TLFGLSVNF-WMAVLTRFLLGSLNGL----LGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPAL 189 (432)
Q Consensus 119 ~~~~~--~~~-~~~~~~~~~-~~l~~~r~~~G~~~g~----~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 189 (432)
..+.. .+. +...+.+-. ..+.++-++.|+..+. ..++ -+++.+.. ++.+.-.|-..+..++|.+++..+
T Consensus 80 i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~ 157 (412)
T PF01306_consen 80 IAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLL 157 (412)
T ss_dssp HHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHH
Confidence 32222 222 222222211 1122233333443232 2222 44443332 233455666788889999999999
Q ss_pred HhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhc-ccccCCCCCCCcchhhhHHHhhhhhhhhhhhh
Q 013991 190 GGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL-PETLHRHNDDDDSCDVSYDALESASAEVKEEE 268 (432)
Q Consensus 190 ~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (432)
+|.+.+ . +-...+++....+++..+..... |+.++..+..+.+..+. +
T Consensus 158 ~G~L~~----------------i-~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~~--------------~ 206 (412)
T PF01306_consen 158 AGILFN----------------I-NPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAKK--------------D 206 (412)
T ss_dssp HHHHHH----------------H-HHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS-----------------
T ss_pred hheeee----------------e-CccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccCC--------------C
Confidence 999885 1 11233344444444433333333 33332221111100000 0
Q ss_pred ccCCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHH
Q 013991 269 GREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLE 348 (432)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~ 348 (432)
+.+.+...+++|+|++|...+...........+...++.|....... .+.+....|++.+..-+.-++.- .+.+++.
T Consensus 207 ~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~--~~~g~~~~G~l~s~~v~~E~~~m-~~~p~li 283 (412)
T PF01306_consen 207 KVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQS--AGQGNQMYGYLWSVQVFLEALMM-FFSPWLI 283 (412)
T ss_dssp ---HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSS--HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
T ss_pred CCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cccChhHHhHHHHHHHHHHHHHH-HHHHHHH
Confidence 00112346789999999887766666666666666666666543211 35566778888888777776664 6899999
Q ss_pred HHhChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHH
Q 013991 349 RILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHF 424 (432)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~ 424 (432)
+|+|.|+.++++..+..+=....++.+... .+...-.+.+.-.........-++++..|++..++.+.+.
T Consensus 284 ~rig~k~~Lllag~i~~iRi~~~~~~~~~~------~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~ 353 (412)
T PF01306_consen 284 NRIGAKNLLLLAGVIMAIRIIGSGFATNPW------VISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVG 353 (412)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHHT--SHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHH
T ss_pred HhcChHhHHHHHHHHHHHHHHHHhhhcchH------HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHH
Confidence 999999999999998888888877766544 4555666666666677778888999999999988887764
No 109
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.78 E-value=9.2e-17 Score=151.38 Aligned_cols=346 Identities=18% Similarity=0.245 Sum_probs=229.9
Q ss_pred HHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHH
Q 013991 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (432)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 124 (432)
.+++..+..++......+..+.....++.+... ......+.......+...+.++..|.++||+|||..+.+..+...+
T Consensus 26 ~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~-~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l 104 (463)
T KOG2816|consen 26 LLFLYMFSWGLSSTVMTNVILYLACTFGDDYQL-ENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTIL 104 (463)
T ss_pred HHHHHHHHHHhcCcchhhhhhhhhcccccCccc-hhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHH
Confidence 444455555555555555555555555444332 1111223333333677789999999999999999999999999888
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhhhccc---hhhHHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCC
Q 013991 125 FNTLFGLSVNFWMAVLTRFLLGSLNGL---LGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (432)
Q Consensus 125 ~~~~~~~~~~~~~l~~~r~~~G~~~g~---~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 201 (432)
..+...+.. |++++ +.|+.++. .....++++|....++|...+++.+.....+..++|.+++.+..
T Consensus 105 ~~~~~~~~~--~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~------ 173 (463)
T KOG2816|consen 105 PALCLLFQG--YWFFL---LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVK------ 173 (463)
T ss_pred hHHHHHHHH--HHHhh---hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHH------
Confidence 888777766 33333 55554333 23348999999999999999999999999999999999999987
Q ss_pred CcccccccccCccchHHHHHHHHHHHHHH-HHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCcccccc
Q 013991 202 NLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLK 280 (432)
Q Consensus 202 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (432)
..+...++.+..+..+... ...+++||+..+++........ .+...... ++..+.....+..-.
T Consensus 174 ----------~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~ 238 (463)
T KOG2816|consen 174 ----------FLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRE----LTPGSLDS-SHVADAFQSLTKVGP 238 (463)
T ss_pred ----------hcCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccc----cCCCcccc-hhhhhhhhhhcccCC
Confidence 4566677777777776644 4567789987655443100000 00000000 000000111111112
Q ss_pred chhHHHHHHHHHHHHHHhhh-HHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHH
Q 013991 281 NWPLMSSIIVYCVFSLHDMA-YSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARI 359 (432)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 359 (432)
+|..+.+.....+....... .....+.|...+ ++|+..+.+.+.+..+....+++.+..+.+.+.++.++....
T Consensus 239 ~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~-----f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~l 313 (463)
T KOG2816|consen 239 DRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAK-----FGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISL 313 (463)
T ss_pred CccchHHHHHHHHHHHHHhcCceeEEEEEEeee-----cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhH
Confidence 23333333333333333222 221334555555 899999999999999999999998888899999999999889
Q ss_pred HHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHHhh
Q 013991 360 AGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFVKL 429 (432)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~~~ 429 (432)
|+....+....+++....+ ................|...++.+..++++++|++.++...++.
T Consensus 314 Gl~~~~~~~~~~af~~~~w-------~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~ 376 (463)
T KOG2816|consen 314 GLLSEFLQLLLFAFATETW-------MMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEG 376 (463)
T ss_pred HHHHHHHHHHHHHHhccch-------hhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHH
Confidence 9988888888888877655 22233333446677889999999999999999999999877654
No 110
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.78 E-value=4e-17 Score=151.63 Aligned_cols=200 Identities=18% Similarity=0.235 Sum_probs=161.6
Q ss_pred CCCCchhHHHHHHHHHHhhccccchhhhHHHHHHH--hcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCC-h
Q 013991 36 SGLPITELFSIWIIVLCTALPISSLFPFLYFMIKD--FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR-K 112 (432)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Gr-r 112 (432)
++.+||.+++..+..++.....+++.+..-.+.++ .+.+.+. .|++.++..++.+++++.+|++..|.++ |
T Consensus 29 ~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~f------fG~viaa~slg~~i~~liF~~Ws~k~~~~k 102 (488)
T KOG2325|consen 29 RKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATF------FGLVIAASSLGHAIFSLIFGIWSNKTGSVK 102 (488)
T ss_pred cCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcch------hhHHHHHHHHHHHhcchhhcccccccCCcc
Confidence 45678889999999999999999998888777777 4555555 9999999999999999999999999997 8
Q ss_pred HHHHHHHHHHHHHHHHHh-h---hh-hHHHHHHHHHHHhhhccchhhHHhhhhhhcccchhhhhhhhHHHHHHHHHHHHH
Q 013991 113 PVIIMGTASVVIFNTLFG-L---SV-NFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGP 187 (432)
Q Consensus 113 ~~l~~~~~~~~~~~~~~~-~---~~-~~~~l~~~r~~~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 187 (432)
+.++.|.++..++++++. + .+ .-+.++++|++.|+|.|......+|+++....++|.++++..+.+..+|.++||
T Consensus 103 ~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp 182 (488)
T KOG2325|consen 103 KPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGP 182 (488)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhH
Confidence 999999999999999993 3 23 678899999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcccCCcCCCccccccc--ccCccchHHHHHHHHHHHHHH-HHHhhcccccCCCCCC
Q 013991 188 ALGGFLAQPAEKYPNLFSSESL--FGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDD 246 (432)
Q Consensus 188 ~~~~~l~~~~~~~~~~~gw~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~ 246 (432)
.++..+..... -|+... ..-+.+..|.++++++.++.+ +..++++|..+...++
T Consensus 183 ~~q~~f~~Lg~-----~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~ 239 (488)
T KOG2325|consen 183 TIQLAFTPLGE-----KGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDK 239 (488)
T ss_pred HHHHHHhhhcC-----CceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCcccc
Confidence 99888875331 122111 112346677788888877744 4456678876655433
No 111
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.77 E-value=1.5e-16 Score=147.55 Aligned_cols=336 Identities=17% Similarity=0.150 Sum_probs=233.3
Q ss_pred CCCchhHHHHHHHHHHhhccccchhhhHH-HHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhc----cCC
Q 013991 37 GLPITELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGR 111 (432)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr----~Gr 111 (432)
+.+.++...-....+............+. ++.+.+|++... +|.+..+.-+--++.-|+.|.++|| +||
T Consensus 8 kLs~~eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~------aG~iflv~RiiDAi~DP~~G~i~D~t~~r~Gr 81 (467)
T COG2211 8 KLSLKEKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAAL------AGTIFLVARIIDAITDPIMGFIVDRTRSRWGR 81 (467)
T ss_pred cccHHHHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHH------HHHHHHHHHHHHHHhcchheeeeccccccccc
Confidence 44555555555555555555555555554 667889999998 9999888888889999999999995 787
Q ss_pred -hHHHHHHHHHHHHHHHHHhhhhh------HHHHHHHHHHHhhhccchh-hHHhhhhhhcc-cchhhhhhhhHHHHHHHH
Q 013991 112 -KPVIIMGTASVVIFNTLFGLSVN------FWMAVLTRFLLGSLNGLLG-PIKAYACEIFR-EEHQALGLSTVSTAWGIG 182 (432)
Q Consensus 112 -r~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r~~~G~~~g~~~-~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g 182 (432)
|+.++.+.+..++.+.++-.+++ ....++...+.+++-.... |-.++.+|+.+ ++||.+..+.-..+.++|
T Consensus 82 fRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g 161 (467)
T COG2211 82 FRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLG 161 (467)
T ss_pred ccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHH
Confidence 45677788888888888877663 3445566677888766654 45888888886 789999999999999999
Q ss_pred HHHHHHHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHH-HHhhcccccCCCCCCCcchhhhHHHhhhhh
Q 013991 183 LIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI-AAFWLPETLHRHNDDDDSCDVSYDALESAS 261 (432)
Q Consensus 183 ~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 261 (432)
..+...+.+.+....++.+. ..+|+....+.+++.++.++ +.+..+|...+....++..
T Consensus 162 ~~l~~~~~~plv~~~g~~~~---------~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~----------- 221 (467)
T COG2211 162 GLLVAVLFPPLVKLFGGGDK---------ALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGV----------- 221 (467)
T ss_pred HHHHHHHHHHHHHHhCCCcc---------hhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcccc-----------
Confidence 77776666666653222111 33566666666666665443 3445666554222111100
Q ss_pred hhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHH
Q 013991 262 AEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQL 341 (432)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~ 341 (432)
+.+........++|++++..++...+.........+....|.+.. +|.+.......+.......+++.
T Consensus 222 ------~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~-----lg~~~l~~~~~~~~~~~~~l~~~- 289 (467)
T COG2211 222 ------KLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYV-----LGDPELFAYLLLLASGAGLLIGL- 289 (467)
T ss_pred ------cccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEE-----cCChHHHHHHHHHHHHHHHHHHH-
Confidence 001112334678999998888877777777666666777666665 67677777777666666666655
Q ss_pred HhHHHHHHHhChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccc
Q 013991 342 SLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVR 414 (432)
Q Consensus 342 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 414 (432)
++.+++.+|+|+|++..++.++.+++.+++.+.... ...+.++..++.+.+.+...+..+++++|.++-
T Consensus 290 ~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~----~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDy 358 (467)
T COG2211 290 ILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAG----SVVLIVVALIIAGVGTGIANPLPWAMVADTVDY 358 (467)
T ss_pred HhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCc----chHHHHHHHHHHHHHhhccccccHHHhcchhhH
Confidence 689999999999999999999988888877766522 223444555666778888889999999998763
No 112
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.77 E-value=1.6e-16 Score=144.53 Aligned_cols=261 Identities=15% Similarity=0.078 Sum_probs=178.1
Q ss_pred hhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCC-ccccc
Q 013991 130 GLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPN-LFSSE 207 (432)
Q Consensus 130 ~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~-~~gw~ 207 (432)
+...+++.++++-++.|.|.+...+. ++++++..++|++.+.+++.+.++++|..+||.+++.+......... ..+-.
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 34578999999999999999999886 99999999999999999999999999999999999988842110000 00000
Q ss_pred ccccCccchHHHHHHHHHHHHHHHHHhh--cccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccchhHH
Q 013991 208 SLFGKFPYFLPCLCISLFAFGVTIAAFW--LPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLM 285 (432)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (432)
... .+.|+.++++.+...++..+.+.+ +||.++++.+ +.. + ++....++.+++|.++
T Consensus 85 ~~~-~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~~-----~~~--------------~-~~~~~~~~~~~~~~~~ 143 (310)
T TIGR01272 85 NAE-AAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADVA-----RVS--------------S-GDTTQKTSAFQFTHLV 143 (310)
T ss_pred hHH-HHHHHHHHHHHHHHHHHHHHHHHHccCCCCCccccc-----ccc--------------c-ccccchhhHHhhHHHH
Confidence 000 135677777555544443333333 3442211100 000 0 0001123456778888
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHH
Q 013991 286 SSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTI 365 (432)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 365 (432)
...+..+++.....+...+.+.|+.+.. .+|+++.+.+...+....+..+++ ++++++.||+++++.+.++..+..
T Consensus 144 l~~~~~f~yvg~e~~~~~w~~~yl~~~~---~~g~s~~~a~~~~s~~~~~~~iGr-~~~~~l~~r~g~~~~l~~~~~l~~ 219 (310)
T TIGR01272 144 LGALGIFVYVGAEVSAGSFLVNFLSDPH---ALGLPEDQAAHFTAYTWGGAMVGR-FIGSAVMPMISQGRYLAFNAFLAV 219 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCHHHHHHHHHHHHH
Confidence 8777888877789999999999996431 158899999999999999999998 599999999999998888777766
Q ss_pred HHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhH
Q 013991 366 PLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCH 423 (432)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~ 423 (432)
++.++...... . . ......+.+++.+..+|...+...+..|++ .+++++.
T Consensus 220 ~~~~l~~~~~~-~--~----~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai 269 (310)
T TIGR01272 220 LLSIGAALTHG-Y--V----AMWFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGI 269 (310)
T ss_pred HHHHHHHHcCC-H--H----HHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHH
Confidence 65544332221 1 1 112333566788889999999998888765 3444444
No 113
>PRK11462 putative transporter; Provisional
Probab=99.76 E-value=1.4e-15 Score=146.40 Aligned_cols=327 Identities=13% Similarity=0.049 Sum_probs=193.9
Q ss_pred CchhHHHHHHHHHHhhccccchhhhH-HHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhc----cCChH
Q 013991 39 PITELFSIWIIVLCTALPISSLFPFL-YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRKP 113 (432)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr----~Grr~ 113 (432)
++++-+.-.++.+...+........+ .++.+..|++... +|.+..+.-+--++..|+.|.++|| +||||
T Consensus 7 ~~~~k~~Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~------~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~r 80 (460)
T PRK11462 7 SVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGF------VGTMFLVARALDAISDPCMGLLADRTRSRWGKFR 80 (460)
T ss_pred cHhHHHhhccchhhhhHHHHHHHHHHHHHHHHhhCCCHHH------HHHHHHHHHHHHHHHhhhheehhccCCCCCCCcc
Confidence 33444333344444444444444444 4677889999998 9999999999999999999999995 78865
Q ss_pred -HHHHHHHHHHHHHHHHhhhhh------HHHHHHHHHHHhhhccchhh-HHhhhhhhcc-cchhhhhhhhHHHHHHHHHH
Q 013991 114 -VIIMGTASVVIFNTLFGLSVN------FWMAVLTRFLLGSLNGLLGP-IKAYACEIFR-EEHQALGLSTVSTAWGIGLI 184 (432)
Q Consensus 114 -~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r~~~G~~~g~~~~-~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~ 184 (432)
.++++.+..+++.+++-..++ ...+++..++..++...... -.++.+|..+ ++||.+..+....+..+|..
T Consensus 81 p~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~ 160 (460)
T PRK11462 81 PWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGM 160 (460)
T ss_pred hhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 555677777777766654432 33455555666666555544 4888889887 89999999999999999988
Q ss_pred HHHHHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHH-HhhcccccCCCCCCCcchhhhHHHhhhhhhh
Q 013991 185 IGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRHNDDDDSCDVSYDALESASAE 263 (432)
Q Consensus 185 ~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (432)
+++.+...+.+..++... ..+|+....+.+++.++..+. ....+|.++.++++. + .
T Consensus 161 ~~~~~~~plv~~~g~~~~---------~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~~~~---~-~---------- 217 (460)
T PRK11462 161 LSTVLMMPLVNLIGGDNK---------PLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPTTT---S-M---------- 217 (460)
T ss_pred HHHHHHHHHHHHhCCCch---------hhhHHHHHHHHHHHHHHHHHHHHhcceeccCCCccCC---C-H----------
Confidence 888876665542111000 234555445555554443333 333455432211100 0 0
Q ss_pred hhhhhccCCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHh
Q 013991 264 VKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSL 343 (432)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~ 343 (432)
....+..++|++++......++..............|.... +| ++...+.++....+..+++. ++
T Consensus 218 --------~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~-----~g-~~~~~~~~l~~~~i~~iig~-~l 282 (460)
T PRK11462 218 --------REDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWI-----LG-TPEVFVAFLTTYCVGNLIGS-AL 282 (460)
T ss_pred --------HHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhh-----cC-ChHHHHHHHHHHHHHHHHHH-HH
Confidence 11345667888887766555555544444444444443332 23 23344556666677777776 68
Q ss_pred HHHHHHHhChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhcccc
Q 013991 344 YPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVV 413 (432)
Q Consensus 344 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 413 (432)
++++.||+++|+....+..+..+...++.+..... . ....+..++.+++.+...+..+++..|..+
T Consensus 283 ~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d 348 (460)
T PRK11462 283 AKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQA---S-ITMFVFIFVIGVLHQLVTPIQWVMMSDTVD 348 (460)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhH---H-HHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Confidence 89999999998887655444333333222222111 1 111222233444555556666778888777
No 114
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.75 E-value=4.5e-15 Score=141.61 Aligned_cols=321 Identities=16% Similarity=0.117 Sum_probs=218.2
Q ss_pred hhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHH-HHHHHHHHHHHHHhhh-hh-HHHHHHHHHHHhhhccchhhH-H
Q 013991 81 GSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII-MGTASVVIFNTLFGLS-VN-FWMAVLTRFLLGSLNGLLGPI-K 156 (432)
Q Consensus 81 ~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~-~~~~~~~~~~~~~~~~-~~-~~~l~~~r~~~G~~~g~~~~~-~ 156 (432)
+.+.++..++..+..++..|+.|.++|+-|+||.++ +...+..+++.++.+. ++ ++...+..++.-++.+...+. .
T Consensus 69 ~s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyn 148 (477)
T PF11700_consen 69 SSLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYN 148 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455678889999999999999999999999766554 4455555666666653 33 333333444444455555555 9
Q ss_pred hhhhhhcccchh--------------------------hhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccc
Q 013991 157 AYACEIFREEHQ--------------------------ALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLF 210 (432)
Q Consensus 157 ~~i~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~ 210 (432)
+++.|+.+++++ ++..+.-.....+|.++.-.+.-.+....+.. .-
T Consensus 149 a~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~--------~~ 220 (477)
T PF11700_consen 149 AYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGST--------AS 220 (477)
T ss_pred HHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCc--------cc
Confidence 999999999888 88888887788888888777766655422111 00
Q ss_pred cCccchHHHHHHHHHHHH-HHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccchhHHHHHH
Q 013991 211 GKFPYFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSII 289 (432)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (432)
..++.|..+.+.++..++ .+...+++||.++.+..++.. .......++ -....+++.|.|.....++
T Consensus 221 ~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~-~~~~~g~~~-----------l~~t~k~~~~~~~~~~fLi 288 (477)
T PF11700_consen 221 NTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGS-SYLRFGFKR-----------LWRTFKEIRKLRQLFLFLI 288 (477)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcch-hHHHHHHHH-----------HHHHHHHHHhChHHHHHHH
Confidence 134457666777766655 444456778776532111111 100000000 1123455667788888889
Q ss_pred HHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChh--HHHHHHHHHHHHH
Q 013991 290 VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI--MVARIAGVLTIPL 367 (432)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~ 367 (432)
.++++.-...+...+...|..+. +|++..+...+.....+.++++. ++.+++.||+|.| +++..+..+..+.
T Consensus 289 a~~l~~dg~~ti~~~~~i~a~~~-----lg~s~~~l~~~~l~~~i~a~~Ga-~~~g~l~~r~g~k~~~~l~~~l~~~~~i 362 (477)
T PF11700_consen 289 AYFLYSDGVNTIISFAGIYATEV-----LGMSTTQLIVFGLVVQIVAIIGA-LLFGWLQDRFGPKTKRTLLISLILWIII 362 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-----cCcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCchhHHHHHHHHHHHHH
Confidence 99988888888888888888876 89999999999999999999998 5889999999998 7766665554222
Q ss_pred HH--HhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 368 LT--SYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 368 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
.+ .+++.....+......+++..++.|.+.+...+...++.++..|+++.+...|.|.+.
T Consensus 363 ~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~ 424 (477)
T PF11700_consen 363 PLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAIT 424 (477)
T ss_pred HHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHH
Confidence 21 1111111111122234666777888899999999999999999999999999998765
No 115
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.71 E-value=2.1e-15 Score=136.41 Aligned_cols=341 Identities=12% Similarity=0.076 Sum_probs=222.5
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHH
Q 013991 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (432)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 122 (432)
++...+..+.+.+....+.+...+..+.+| +.+. .-|..-+|++.++...+++-|+.||+|-|...+++..+.
T Consensus 47 Ll~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~------~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln 119 (480)
T KOG2563|consen 47 LLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSA------ADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLN 119 (480)
T ss_pred HHHHHHHHhcCcchheeehhHHHHHHHHhc-chHH------HHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHH
Confidence 334555666677777777787778888888 5555 789999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhh------hHH--HHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhh
Q 013991 123 VIFNTLFGLSV------NFW--MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (432)
Q Consensus 123 ~~~~~~~~~~~------~~~--~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 193 (432)
+++..+-..+. .++ ....+..+.+.++-.+... .-+..-|+++++|..+..+-.++..+|.++|.++...+
T Consensus 120 ~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppil 199 (480)
T KOG2563|consen 120 GIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPIL 199 (480)
T ss_pred HHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhcccee
Confidence 99998877653 344 5556667777666555555 55667889999999999999999999999999999988
Q ss_pred cccCCcCCCcccccccccCccchHHHHHHHHHHHH-HHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCC
Q 013991 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREA 272 (432)
Q Consensus 194 ~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (432)
.....+.. ... |.....++....+..+ ..+..+..++.|+.+.+..+.... ...-.
T Consensus 200 V~~~~~~~-~~~-------~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~---------------~~~f~ 256 (480)
T KOG2563|consen 200 VPSSKDSE-DNS-------WLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQ---------------DASFP 256 (480)
T ss_pred cCCCCCcc-hhH-------HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhh---------------cCcHH
Confidence 87432111 111 1122223433333333 223333344444333222111100 01123
Q ss_pred CCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhC
Q 013991 273 TPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG 352 (432)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 352 (432)
+..++.++|+++....+.+..-...+.+..+.+..-+.. -|++...+|++.....+.+.+++ .+.+.+.||.+
T Consensus 257 ~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~------sgY~~~~aG~ig~l~iv~Gmlga-~~~gii~Dktk 329 (480)
T KOG2563|consen 257 KSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCP------SGYEGVFAGYIGALMIVAGMLGA-LASGIIADKTK 329 (480)
T ss_pred HHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc------ccCCccccchhHHHHHHHHHHHH-HHHHhhhhhhh
Confidence 456788999999888777777666655555554433332 36667889999999889999998 58888888876
Q ss_pred hhHH-HHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhh
Q 013991 353 PIMV-ARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSC 422 (432)
Q Consensus 353 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~ 422 (432)
.-+. .++......++...+....... ...++++....+.+++..+.+|....+..|..=+...++.+|
T Consensus 330 ~fk~~~~v~~~~~~v~~~~l~~~t~~~--~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsG 398 (480)
T KOG2563|consen 330 KFKLTTLVLYLFALVGTLMLLTCTLFL--GDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSG 398 (480)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccC--CceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccce
Confidence 5443 3333333333322222222212 223345566667788888888988888888764444444444
No 116
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.70 E-value=3e-14 Score=131.20 Aligned_cols=364 Identities=14% Similarity=0.137 Sum_probs=220.6
Q ss_pred hhHHHHHHHHHHhhccccchhhhHH-HHHHHhc----CCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhc-cCChHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLY-FMIKDFQ----IAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPV 114 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~ 114 (432)
|.++.++..-+-.-++++.+-..+. ++..+++ .++++ +.-+.++|..-.=+..+++|+++|| +|+|+.
T Consensus 21 r~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~------A~~l~~~y~slVY~t~i~GG~laDr~LG~~~t 94 (498)
T COG3104 21 RGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETH------ATGLFSAYGSLVYLTPIIGGWLADRVLGTRRT 94 (498)
T ss_pred chHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHh------hHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Confidence 5677777788888887776666554 5566666 88877 6666666655555788999999999 799999
Q ss_pred HHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHhhhccchhhH-Hhhhhhhcccc--hhhhhhhhHHHHHHHHHHHHHHH
Q 013991 115 IIMGTASVVIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE--HQALGLSTVSTAWGIGLIIGPAL 189 (432)
Q Consensus 115 l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~ 189 (432)
++.|.++..++.++.+.+. +...++++-++.++|.|.+-+. .+++.|.+|++ +|...++++.++.++|+.++|.+
T Consensus 95 I~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i 174 (498)
T COG3104 95 IVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPII 174 (498)
T ss_pred HHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHH
Confidence 9999999999999999884 7888999999999999999875 99999999864 47788999999999999999999
Q ss_pred HhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCC----CCCCCcchhhhH-----------
Q 013991 190 GGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHR----HNDDDDSCDVSY----------- 254 (432)
Q Consensus 190 ~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~----~~~~~~~~~~~~----------- 254 (432)
.+++.+ +++|...|..+++-....++.....++.... .+..+.+.....
T Consensus 175 ~~~~~~----------------~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (498)
T COG3104 175 TGLLAI----------------NYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMIL 238 (498)
T ss_pred HHHHHH----------------hhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHH
Confidence 999998 5555555567666655555554444432211 111111111000
Q ss_pred HHh-----hhhhhhhh--------h---hhccCCCCc--cccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCC
Q 013991 255 DAL-----ESASAEVK--------E---EEGREATPK--KSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLG 316 (432)
Q Consensus 255 ~~~-----~~~~~~~~--------~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (432)
... ..+.-... + ..+....+. .+.-|-.....+.+...++...+....+.+..|..+....+
T Consensus 239 ~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~ 318 (498)
T COG3104 239 AALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQ 318 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhccc
Confidence 000 00000000 0 000000111 11101111122223333333333333444455544432222
Q ss_pred CcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChh-------HHHHHHHHHHHHHHHHhhHHHhh----hhhHHHHH
Q 013991 317 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPI-------MVARIAGVLTIPLLTSYPYIAML----SGFGLAFL 385 (432)
Q Consensus 317 ~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 385 (432)
-+|++ .......+...+..++.+ ++..++-.+.+++ .=..+++.++..+++++...... .+.....+
T Consensus 319 ~~g~~-vp~~~fQslNp~~Iii~~-pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~ 396 (498)
T COG3104 319 IFGFE-VPPAWFQSLNPFFIILFS-PILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWW 396 (498)
T ss_pred cccee-cCHHHHHhhCHHHHHHHH-HHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHH
Confidence 23322 223445555555555554 3444444442221 12234555555555555444111 22233445
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHHh
Q 013991 386 LNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFVK 428 (432)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~~ 428 (432)
.....++..++.-...|...+++.+.+|+...+.+.+++.+..
T Consensus 397 lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~ 439 (498)
T COG3104 397 LVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTV 439 (498)
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 5566667777888889999999999999999999988887653
No 117
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.69 E-value=2.6e-18 Score=166.03 Aligned_cols=308 Identities=17% Similarity=0.220 Sum_probs=2.9
Q ss_pred HHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHH
Q 013991 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (432)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 124 (432)
.+++..+...+..+.....+..+.+.|+++..+ .|++.+.+-++..+..++..++.+|..|-|.+-+|.++.++
T Consensus 7 ~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~------~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~ 80 (539)
T PF03137_consen 7 FLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQ------SGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGL 80 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHH
Confidence 445555666666667777888999999999999 99999999999999999999999998888999999999999
Q ss_pred HHHHHhhhh--------------------------------------------------hHHHHHHHHHHHhhhccchhh
Q 013991 125 FNTLFGLSV--------------------------------------------------NFWMAVLTRFLLGSLNGLLGP 154 (432)
Q Consensus 125 ~~~~~~~~~--------------------------------------------------~~~~l~~~r~~~G~~~g~~~~ 154 (432)
+++++++.+ -+..++++.++.|+|.....+
T Consensus 81 g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~t 160 (539)
T PF03137_consen 81 GSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYT 160 (539)
T ss_dssp -----------------------------------------------------------------------SSS------
T ss_pred HHHHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCcc
Confidence 999886410 124677889999999999988
Q ss_pred H-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCc-------ccccccccCccchHHHHHHHHHH
Q 013991 155 I-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL-------FSSESLFGKFPYFLPCLCISLFA 226 (432)
Q Consensus 155 ~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~-------~gw~~~~~~~~~~~~~~~~~~~~ 226 (432)
. .+|+-|..++++-+..+|+..+...+|.++|.++++.+...-.+++.. -.....| -..||..+++.+.+.
T Consensus 161 LG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~W-vGAWWLGfli~g~~~ 239 (539)
T PF03137_consen 161 LGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRW-VGAWWLGFLICGILL 239 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccH-HHHHHHHHHHHHHHH
Confidence 7 999999999999999999999999999999999999888643222110 0111122 346888888888888
Q ss_pred HHHHHHHhhcccccCCCCCCCcchhhhH---HHhhhhh-hhh------hhhhccCCCCccccccchhHHHHHHHHHHHHH
Q 013991 227 FGVTIAAFWLPETLHRHNDDDDSCDVSY---DALESAS-AEV------KEEEGREATPKKSLLKNWPLMSSIIVYCVFSL 296 (432)
Q Consensus 227 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~---~~~~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (432)
++..+.++.+|+..+..++..++.+... ++.++.. ++. .+..++-+...+.+++||.+....+.......
T Consensus 240 ~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~ 319 (539)
T PF03137_consen 240 FLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESF 319 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHH
Confidence 7777777777766544411111111000 0000000 000 11223445667889999999999999999999
Q ss_pred HhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhC--hhHHHHHHHHHH
Q 013991 297 HDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG--PIMVARIAGVLT 364 (432)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~ 364 (432)
...++.++.|.|++.. ++.++.+++.+.....+.+...+.+++|++.+|++ .|+.+....+..
T Consensus 320 ~~~G~~tF~pKylE~Q-----F~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~ 384 (539)
T PF03137_consen 320 IVSGFATFLPKYLESQ-----FGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVS 384 (539)
T ss_dssp ----------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHH-----hCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHH
Confidence 9999999999999887 89999999999888888666666679999999874 344444443333
No 118
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.68 E-value=3.6e-14 Score=127.85 Aligned_cols=322 Identities=11% Similarity=-0.025 Sum_probs=211.4
Q ss_pred chhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHH-HHHHHHHHHHHHHHhhhhh--HH-HHHHHHHHHhhhccchhh
Q 013991 79 DIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVI-IMGTASVVIFNTLFGLSVN--FW-MAVLTRFLLGSLNGLLGP 154 (432)
Q Consensus 79 ~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l-~~~~~~~~~~~~~~~~~~~--~~-~l~~~r~~~G~~~g~~~~ 154 (432)
+.+.+.+...++..+...+.+|+.|.++|+.|+||.. -....+..++..+..++++ ++ ..++..++..++.....+
T Consensus 55 ~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~V 134 (438)
T COG2270 55 SSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNV 134 (438)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhe
Confidence 3456689999999999999999999999999976654 4445555555556655544 44 445555667776555555
Q ss_pred H-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHH--hhhcccCCcCC-CcccccccccCccchHHHHHHHHHHHHHH
Q 013991 155 I-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG--GFLAQPAEKYP-NLFSSESLFGKFPYFLPCLCISLFAFGVT 230 (432)
Q Consensus 155 ~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--~~l~~~~~~~~-~~~gw~~~~~~~~~~~~~~~~~~~~~~~~ 230 (432)
. .+++.+..++++-++..++-.....+|..+.-+.. ..+....+..+ ..++-...- ...-|..+.++++..++..
T Consensus 135 fyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~-~~~~ri~~~l~A~W~li~~ 213 (438)
T COG2270 135 FYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPAD-GEDVRITGLLAALWWLLFA 213 (438)
T ss_pred ehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccc-cccchhHHHHHHHHHHHHH
Confidence 5 99999999998888777665555555555443332 12211111110 011111112 3446666677777666654
Q ss_pred HHH-hhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhh
Q 013991 231 IAA-FWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWA 309 (432)
Q Consensus 231 ~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (432)
+.. +..++.++.... ..+...+..++. ....++..+++++....+..+++.-...+...+-..|.
T Consensus 214 iPm~~~v~~~~~~~~~---~~~~l~~g~k~L-----------~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg 279 (438)
T COG2270 214 LPMILNVHDAEKISSP---PPTALRNGFKEL-----------KSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFG 279 (438)
T ss_pred hHHHhccccccccccc---chHHHHHHHHHH-----------HHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 444 344444332111 111111111111 12345566677777788888877766666666666676
Q ss_pred cCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHH
Q 013991 310 NSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCA 389 (432)
Q Consensus 310 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (432)
... +|++..+...+....++.++++. ++.+++++|++.|+++.++.++..+..+...+.... ....+.
T Consensus 280 ~~~-----~gls~~~lll~g~~~~vvA~lg~-ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~------~~f~i~ 347 (438)
T COG2270 280 AAD-----LGLSSTELLLIGIALSVVAALGA-IIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGE------LDFWIL 347 (438)
T ss_pred HHH-----cCccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCceeehHHHHHHHHHHHHHHHcccc------HHHHHH
Confidence 655 89999999999999999999998 588999999999998888887766655444333222 235566
Q ss_pred HHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 390 SVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
..+.+.+.++......++..+.+|+++.+...|.|...
T Consensus 348 gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyalt 385 (438)
T COG2270 348 GLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALT 385 (438)
T ss_pred HHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhh
Confidence 67777888999999999999999999999999988653
No 119
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.68 E-value=1e-13 Score=125.38 Aligned_cols=315 Identities=16% Similarity=0.085 Sum_probs=203.7
Q ss_pred HHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccC-----ChHHHH-HHHHHHHHHHHHHhhh-----h--
Q 013991 67 MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-----RKPVII-MGTASVVIFNTLFGLS-----V-- 133 (432)
Q Consensus 67 ~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~G-----rr~~l~-~~~~~~~~~~~~~~~~-----~-- 133 (432)
+..|++++..- .+.+.+...+.. ...+.+|..+|+.+ ||..++ .|.+....+..+..++ .
T Consensus 6 MIvEL~vpA~l------v~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~ 78 (403)
T PF03209_consen 6 MIVELGVPAWL------VALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESG 78 (403)
T ss_pred HHHHhccHHHH------HHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 45678887776 888888887775 46999999999999 876554 4566666655555432 2
Q ss_pred ------h-HH--HHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCc
Q 013991 134 ------N-FW--MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (432)
Q Consensus 134 ------~-~~--~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 203 (432)
. .+ ...+...+.|+|.+...+. .++++|..|+|+|+++.++...+.-+|.+++..+.+.+.+.
T Consensus 79 ~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~------- 151 (403)
T PF03209_consen 79 QQSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDP------- 151 (403)
T ss_pred cccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccc-------
Confidence 1 12 2344556778887777665 99999999999999999999999999999999999998872
Q ss_pred ccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccchh
Q 013991 204 FSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWP 283 (432)
Q Consensus 204 ~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (432)
+.-... .+ .+...++..+..-+...+-.|.+..+..+.++++ +......++++..+|+
T Consensus 152 ~s~~rL-----~~-v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~~~~----------------~~~f~~a~~~~~~~~~ 209 (403)
T PF03209_consen 152 FSPERL-----IQ-VIQGVALIALLLNLIALWGQEPRRSRRAAAAERP----------------RPPFREAWRQVWASPQ 209 (403)
T ss_pred cCHHHH-----HH-HHHHHHHHHHHHHHHHHHhcccCCcccccCCCCC----------------CccHHHHHHHHHhCCC
Confidence 111100 11 1111222222211222232343332222110000 0001123455666777
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHH
Q 013991 284 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 363 (432)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 363 (432)
.++.....++..+....-...+-.|.-+ -+|++..+...+....+.+..++-...+..+.+|.++++...+++..
T Consensus 210 a~~f~~fl~l~t~a~~~QD~iLEPygg~-----Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~ 284 (403)
T PF03209_consen 210 ARRFFVFLFLGTLAFFMQDVILEPYGGE-----VFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLL 284 (403)
T ss_pred hhHHHHHHHHHHHHHHhhHHHcCCchhH-----HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHH
Confidence 6666665555555544444443333333 38999999999999999998888654555556678888888888888
Q ss_pred HHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHH
Q 013991 364 TIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFW 425 (432)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~ 425 (432)
..+++.++.......+ ...+....++.|++.+.......+.+.+..++++.|...|..-
T Consensus 285 ~~~~f~lii~a~~~~~---~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WG 343 (403)
T PF03209_consen 285 GALAFALIILAGPLGS---PWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWG 343 (403)
T ss_pred HHHHHHHHHHHHhccc---chHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHH
Confidence 8888777665544332 2345566677788888887788888888888888887766553
No 120
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.66 E-value=1.6e-15 Score=146.66 Aligned_cols=310 Identities=16% Similarity=0.201 Sum_probs=237.1
Q ss_pred HHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHH
Q 013991 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (432)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 124 (432)
.+.+..+...+....+...+..+.+.|+++..+ .|++.+.+-++..+...+..+...|.-|-+.+-+|++++++
T Consensus 101 ~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~------sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~l 174 (735)
T KOG3626|consen 101 LLSLAAFAQGLYVGYFNSVITTIERRFKISSSQ------SGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGL 174 (735)
T ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCc------ceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHH
Confidence 556666777777777778888999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHhhhh-------------------------------------------------h--HH-HHHHHHHHHhhhccch
Q 013991 125 FNTLFGLSV-------------------------------------------------N--FW-MAVLTRFLLGSLNGLL 152 (432)
Q Consensus 125 ~~~~~~~~~-------------------------------------------------~--~~-~l~~~r~~~G~~~g~~ 152 (432)
+++++++.+ + ++ .++++.++.|+|....
T Consensus 175 gsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi 254 (735)
T KOG3626|consen 175 GSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPI 254 (735)
T ss_pred HHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCC
Confidence 999997420 0 22 5677889999999999
Q ss_pred hhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcC-CCccc---ccccccCccchHHHHHHHHHHH
Q 013991 153 GPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKY-PNLFS---SESLFGKFPYFLPCLCISLFAF 227 (432)
Q Consensus 153 ~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~-~~~~g---w~~~~~~~~~~~~~~~~~~~~~ 227 (432)
.+. .+|+-|...+++-+..+|+......+|.++|-++++++...-.++ ....+ -...| -..||.-|++++.+.+
T Consensus 255 ~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrW-IGAWWlGFLi~g~~~~ 333 (735)
T KOG3626|consen 255 FTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRW-IGAWWLGFLICGALLL 333 (735)
T ss_pred ccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcch-hhHHHHHHHHHHHHHH
Confidence 887 999999999999999999999999999999999999988643322 11111 11222 4468999999999988
Q ss_pred HHHHHHhhcccccCCCCCCCcchhhhHHHhhh----hhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHhhhHHH
Q 013991 228 GVTIAAFWLPETLHRHNDDDDSCDVSYDALES----ASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSE 303 (432)
Q Consensus 228 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (432)
+..+.++++|+..++..++.+..+......++ .......+.++-+...+++++||.+...++...+......++.+
T Consensus 334 ~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~t 413 (735)
T KOG3626|consen 334 FSAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYIT 413 (735)
T ss_pred HHHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHH
Confidence 88888888887765543221111100000000 00011112233456678899999999999999999999999999
Q ss_pred HHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhC--hhHHHHHHHHHHHH
Q 013991 304 IFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG--PIMVARIAGVLTIP 366 (432)
Q Consensus 304 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~ 366 (432)
++|-|++.. +|.++..+..+....++..+..+++++|++.+|+. .|....+.++...+
T Consensus 414 FlPKyLE~Q-----fg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l 473 (735)
T KOG3626|consen 414 FLPKYLETQ-----FGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVL 473 (735)
T ss_pred hhHHHHHHH-----cCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHH
Confidence 999999987 89999999999999998888777889999999864 44555544444433
No 121
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.61 E-value=2.8e-14 Score=138.94 Aligned_cols=174 Identities=15% Similarity=0.241 Sum_probs=124.0
Q ss_pred HHhhccccchhhhHHHHH-HHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHH-
Q 013991 51 LCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTL- 128 (432)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~- 128 (432)
+............+|.+. +++|.+..+ .++..+...++..++.++.|+++||+|||+.+.++.++..++.+.
T Consensus 260 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~ 333 (490)
T PRK10642 260 IATNVTYYMLLTYMPSYLSHNLHYSEDH------GVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPA 333 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 333344445556677655 567888776 777888888999999999999999999999988887654433322
Q ss_pred --HhhhhhHHHHHHHHHHHhhhccchhh-HHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCccc
Q 013991 129 --FGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFS 205 (432)
Q Consensus 129 --~~~~~~~~~l~~~r~~~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~g 205 (432)
...+++...+++++++.|++.+.... ...++.|.+|++.|+++++.......++..++|.+.+++.+.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~--------- 404 (490)
T PRK10642 334 FILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVES--------- 404 (490)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH---------
Confidence 22244577788889888886555444 477888999999999999975444556667899998888761
Q ss_pred ccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCC
Q 013991 206 SESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHND 245 (432)
Q Consensus 206 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 245 (432)
..+|+.++.+..+.+++.++..+++||++++..+
T Consensus 405 ------~~~~~~~~~~~~~~~~i~~~~~~~~pes~~~~~~ 438 (490)
T PRK10642 405 ------TQNLMMPAYYLMVVAVIGLITGVTMKETANRPLK 438 (490)
T ss_pred ------hCCchHHHHHHHHHHHHHHHHHHHhccccCCCCC
Confidence 1234555555555666666666778999887543
No 122
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.61 E-value=1.1e-14 Score=138.55 Aligned_cols=174 Identities=12% Similarity=0.117 Sum_probs=127.3
Q ss_pred chhhhHHHHHHHhcCCcccc--chhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhh---
Q 013991 59 SLFPFLYFMIKDFQIAKREE--DIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV--- 133 (432)
Q Consensus 59 ~~~~~~~~~~~~~~~s~~~~--~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--- 133 (432)
......+.+.++.|.++... ......+...++..++..++.++.|+++||+|||+++.++.++.+++..+.....
T Consensus 226 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~ 305 (418)
T TIGR00889 226 ITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEY 305 (418)
T ss_pred HHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcch
Confidence 34455566666776554210 0001178999999999999999999999999999999999999988876666532
Q ss_pred -hHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHH-HHHHHHHHHHHHHHhhhcccCCcCCCcccccccc
Q 013991 134 -NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLF 210 (432)
Q Consensus 134 -~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~ 210 (432)
+.+.+++.+++.|++.+...+. ..++.|.+|+++|++++++.+ ...++|.++||.++|.+.+..++.+
T Consensus 306 ~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~--------- 376 (418)
T TIGR00889 306 FGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYG--------- 376 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcccc---------
Confidence 3466778899999988777665 889999999999999999997 6788999999999999998322100
Q ss_pred cCccchHHHHHHHHHHHH-HHHHHhhcccccCC
Q 013991 211 GKFPYFLPCLCISLFAFG-VTIAAFWLPETLHR 242 (432)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~ 242 (432)
.++|+..+.+.++..++ .++..+++||+.+.
T Consensus 377 -~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 377 -TFDWQTMWLFFAGYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred -CCchHHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 02355555666655554 44555677776443
No 123
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.60 E-value=3.4e-14 Score=141.78 Aligned_cols=140 Identities=14% Similarity=0.096 Sum_probs=116.6
Q ss_pred hHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-Hhhhhhhc
Q 013991 85 GYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIF 163 (432)
Q Consensus 85 ~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~ 163 (432)
.+...+..++.+++.++.|+++||+|||++++++.++.++++++.++.++...+++.+++.|++.+...+. .++++|++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34456677888999999999999999999999999999999999999888888888888888865555554 89999999
Q ss_pred ccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccC
Q 013991 164 REEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLH 241 (432)
Q Consensus 164 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 241 (432)
|+++|++++|+.+....+|.++||.+++.+.+ . ....++++.+++.++..+...++||+..
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~----------------~-~~~~pf~i~a~~lll~~ll~~~LPET~~ 738 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVG----------------I-TKAAPILFASAALACGGLLALKLPDTRG 738 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------h-hhHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 99999999999999999999999999998875 1 1345666676666666666667788654
No 124
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.59 E-value=7.5e-13 Score=117.87 Aligned_cols=264 Identities=16% Similarity=0.109 Sum_probs=164.8
Q ss_pred hccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhh
Q 013991 54 ALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV 133 (432)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 133 (432)
........|....+-+++|.++.+ ++.+.........+..++.|.++||+|||+.-++-+++..++++.. ..+
T Consensus 47 ~~aDWLQGpY~Y~LY~~yg~~~~q------Ia~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k-~~~ 119 (354)
T PF05631_consen 47 MAADWLQGPYLYALYESYGFSEHQ------IAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK-HSS 119 (354)
T ss_pred HHHHHhhcchhHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH-hcc
Confidence 333444567666566789999999 9999999999999999999999999999999999999999998654 468
Q ss_pred hHHHHHHHHHHHhhhccchhhH-H-hhhhhhc----ccchhhhhhhhHH-HHHHHHHHHHHHHHhhhcccCCcCCCcccc
Q 013991 134 NFWMAVLTRFLLGSLNGLLGPI-K-AYACEIF----REEHQALGLSTVS-TAWGIGLIIGPALGGFLAQPAEKYPNLFSS 206 (432)
Q Consensus 134 ~~~~l~~~r~~~G~~~g~~~~~-~-~~i~~~~----~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw 206 (432)
+++.++++|++.|++......+ - -++.|.- |++..+..++... ...++-.+.+.+++-++.+. .
T Consensus 120 ~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~-------~-- 190 (354)
T PF05631_consen 120 NYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADW-------F-- 190 (354)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHH-------h--
Confidence 8999999999999998887665 4 4566663 2333333333333 22334445555555555551 1
Q ss_pred cccccCccchHHHHHHHHHHHHHHHHH-hhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccchhHH
Q 013991 207 ESLFGKFPYFLPCLCISLFAFGVTIAA-FWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLM 285 (432)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (432)
..+...||.....+.++..+.+ ..-+|+.....++.+..+.. ....+.+.++|+++
T Consensus 191 -----~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~~------------------~~a~~~i~~d~ril 247 (354)
T PF05631_consen 191 -----GFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGSF------------------REAWRAILSDPRIL 247 (354)
T ss_pred -----CCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHHH------------------HHHHHHHHcCchhH
Confidence 2233566777766666544443 34456544322111111100 11345567788888
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHH
Q 013991 286 SSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 363 (432)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 363 (432)
.+.++..++-.....+... ..|.... .+ ...-.|++++.+-+..++|+.+....+.++......+.....+
T Consensus 248 ~LG~~qslFE~smy~FVfl-----WtPaL~~-~~-~~~P~GlIFssFM~a~MlGS~lf~~l~s~~~~~e~~l~~v~~~ 318 (354)
T PF05631_consen 248 LLGLIQSLFEGSMYLFVFL-----WTPALDP-DD-EELPLGLIFSSFMVAMMLGSSLFSRLLSKSLRPESLLRYVFAV 318 (354)
T ss_pred HHHHHHHHHHHHHHHheee-----eeceecC-CC-CCCCchHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 8777776665554444322 2332221 11 2334789999988888888853334455554444444443333
No 125
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.58 E-value=9e-14 Score=131.64 Aligned_cols=156 Identities=15% Similarity=0.204 Sum_probs=122.1
Q ss_pred hhhhHHH-HHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhHHHH
Q 013991 60 LFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMA 138 (432)
Q Consensus 60 ~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l 138 (432)
.....|. +.+++|.++.+ .+++.+...++..++.++.|+++||+|||+.+..+.+...+.......+++.+.+
T Consensus 235 ~~~~~p~~l~~~~~~~~~~------~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (393)
T PRK15011 235 YIINMPLFIINELHLPEKL------AGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAIL 308 (393)
T ss_pred HHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 4445664 45678988887 8888888778888899999999999999998887776666655555567788888
Q ss_pred HHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccchH
Q 013991 139 VLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFL 217 (432)
Q Consensus 139 ~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~ 217 (432)
++.+++.+++.|...+. ..+..|..|+ +|++++++++....+|..+||.++|.+.+ .++|+.
T Consensus 309 l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~----------------~~g~~~ 371 (393)
T PRK15011 309 LGLQLLNAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAE----------------IWNYHA 371 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHH----------------HhhhHH
Confidence 88888888876665554 6778888875 69999999999999999999999999988 445566
Q ss_pred HHHHHHHHHHHHHHHHhhccc
Q 013991 218 PCLCISLFAFGVTIAAFWLPE 238 (432)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~e 238 (432)
++.+.+++.++.++..+++||
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 372 VFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHHhhcC
Confidence 667777777776666666665
No 126
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.57 E-value=2.5e-14 Score=114.31 Aligned_cols=136 Identities=32% Similarity=0.577 Sum_probs=113.0
Q ss_pred HHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-Hhhhhhhccc
Q 013991 87 VGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE 165 (432)
Q Consensus 87 ~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~ 165 (432)
..+.+.++..++.++.|++.||+|||+.+..+.....++.+.....++++.+.+.+++.|++.+...+. ..++.|..|+
T Consensus 3 ~~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 82 (141)
T TIGR00880 3 LLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPP 82 (141)
T ss_pred EEEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCCh
Confidence 345667888999999999999999999999999999999998888899999999999999988877775 8999999999
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHH-Hhhccc
Q 013991 166 EHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPE 238 (432)
Q Consensus 166 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e 238 (432)
++|++..++.+....+|..++|.+++.+.+ ..+|+..+.+.+...++..+. .+..||
T Consensus 83 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 83 EERGVALGLMSAGIALGPLLGPPLGGVLAQ----------------FLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhhHHHHHHHHhHHHHHHHhHHhHHHHhc----------------ccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999999987 334545556665555544333 334444
No 127
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.56 E-value=1.2e-13 Score=131.53 Aligned_cols=135 Identities=21% Similarity=0.281 Sum_probs=114.9
Q ss_pred ccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhh
Q 013991 55 LPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN 134 (432)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~ 134 (432)
..........|.+.++.|.+..+ .+...+...++..++.++.|+++||+|||+.+..+.+...++.++....++
T Consensus 234 ~~~~~~~~~~p~~~~~~g~s~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~ 307 (406)
T PRK11551 234 IVLYFLLNWLPSLLVGQGLSRSQ------AGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPS 307 (406)
T ss_pred HHHHHHHHHHHHHHHhCCCChhh------hhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 33334455678888889999888 999999999999999999999999999999998877777777777777777
Q ss_pred HHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 135 FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 135 ~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
.+.+.+..++.|++.+...+. .+++.|.+|+++|++.+++.+....+|..+||.++|.+.+
T Consensus 308 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 369 (406)
T PRK11551 308 FAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLA 369 (406)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhc
Confidence 777777778888876555554 8899999999999999999999999999999999999987
No 128
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.56 E-value=5.1e-14 Score=132.52 Aligned_cols=144 Identities=13% Similarity=0.034 Sum_probs=115.4
Q ss_pred HHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHH
Q 013991 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (432)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 125 (432)
.....+.............+.+.++++.++.+ .+.+.+.+.++..++.++.|++.||+|||+.+.++.++..++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~ 283 (377)
T TIGR00890 210 LYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGF------LVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVG 283 (377)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHH
Confidence 33333333333333444556677888888877 899999999999999999999999999999999999888888
Q ss_pred HHHHhhhhhH--HHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 126 NTLFGLSVNF--WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 126 ~~~~~~~~~~--~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
.++..+.++. ..++...++.|++.+...+. .+++.|.+|+++|++..++.+....+|..++|.+.+.+.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 356 (377)
T TIGR00890 284 MAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALT 356 (377)
T ss_pred HHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8877766543 33445667788876666554 8889999999999999999999999999999999999987
No 129
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.56 E-value=2.3e-14 Score=137.04 Aligned_cols=139 Identities=19% Similarity=0.144 Sum_probs=113.9
Q ss_pred hhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-Hhhhhhh
Q 013991 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEI 162 (432)
Q Consensus 84 ~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~ 162 (432)
.|++.++..++..++.+++|++.||+|||+.+.++.++.+++.++.+++++.+.+++.+++.|++.+...+. ..++.|.
T Consensus 264 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 343 (420)
T PRK09528 264 FGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLN 343 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999888888999999999999999887766554 7899999
Q ss_pred cccchhhhhhhh-HHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHH-HHHhhccc
Q 013991 163 FREEHQALGLST-VSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPE 238 (432)
Q Consensus 163 ~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e 238 (432)
+|++.|+...+. ++....+|.+++|.+.|++.+ ..+|+.++...++..++.. +..+.+++
T Consensus 344 ~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~----------------~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 344 FDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYD----------------SIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred cCccceeeeeeehHHHHHHHHHHHHHHHHHHHHH----------------hhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999887665 677888999999999999998 3345555566666555433 33344444
No 130
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.55 E-value=1.7e-13 Score=130.28 Aligned_cols=159 Identities=19% Similarity=0.169 Sum_probs=125.9
Q ss_pred cchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhHHH
Q 013991 58 SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWM 137 (432)
Q Consensus 58 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 137 (432)
.......+.+.++.|. ++ .++..+.+.++..++.++.|++.||+|||+.+..+..+..++.++....++.+.
T Consensus 233 ~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (399)
T PRK05122 233 GTIATFITLYYAARGW--DG------AALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWM 304 (399)
T ss_pred HHHHHHHHHHHHHccc--cc------chHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 3344555655556555 33 566778888899999999999999999999999998888888888888888888
Q ss_pred HHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccch
Q 013991 138 AVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYF 216 (432)
Q Consensus 138 l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~ 216 (432)
+++.+++.|++.+...+. ...+.|..|+++|+++.++++....+|..++|.+.+.+.+ .++|+
T Consensus 305 ~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~----------------~~g~~ 368 (399)
T PRK05122 305 ALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVAS----------------WFGYP 368 (399)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HcCHH
Confidence 888899999988777665 6778899999999999999999999999999999999987 44455
Q ss_pred HHHHHHHHHHHHHHHHHhhccccc
Q 013991 217 LPCLCISLFAFGVTIAAFWLPETL 240 (432)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~e~~ 240 (432)
..+.+.+++.++.++....+++++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~ 392 (399)
T PRK05122 369 SIFLAAALAALLGLALTWLLYRRA 392 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccc
Confidence 555777666666555555555543
No 131
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.54 E-value=1.8e-13 Score=129.11 Aligned_cols=149 Identities=12% Similarity=0.057 Sum_probs=129.9
Q ss_pred chhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHH
Q 013991 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (432)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (432)
.++++...+..++............|.+.+++|.++.+ .|.+.+...++..++.++.+++.||+|+|+.+.++.
T Consensus 204 ~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~------~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~ 277 (382)
T TIGR00902 204 NPMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASA------TGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISA 277 (382)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhH------HHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHH
Confidence 34455555555555566666667778777889999998 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHH-HHHHHHHHHHHHHHhhhcc
Q 013991 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~ 195 (432)
++..+..++++++++.+.+++.+++.|+..+...+. ..++.+. |+++|++..++++ ...++|.++||.++|++.+
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~ 354 (382)
T TIGR00902 278 IACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYP 354 (382)
T ss_pred HHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998888776 8899988 9999999999986 5788999999999999998
No 132
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.52 E-value=5.5e-13 Score=125.55 Aligned_cols=154 Identities=15% Similarity=0.293 Sum_probs=120.9
Q ss_pred hhHH-HHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhHHHHHH
Q 013991 62 PFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVL 140 (432)
Q Consensus 62 ~~~~-~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 140 (432)
...| ++.+++|.++.+ .+++.+.......++.++.|++.||+|||+++.++.++..+........++.+.+++
T Consensus 220 ~~~~~~~~~~~g~~~~~------~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (375)
T TIGR00899 220 INMPLLIIHELGLPDKL------AGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLM 293 (375)
T ss_pred hhhHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445 445778998888 888888877777888999999999999999998887777666666666778888888
Q ss_pred HHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccchHHH
Q 013991 141 TRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPC 219 (432)
Q Consensus 141 ~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~ 219 (432)
.+++.|++.+...+. ..++.|..|+ +|++++++.+....+|..++|.+++.+.+ ..+|+..+
T Consensus 294 ~~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~----------------~~g~~~~~ 356 (375)
T TIGR00899 294 LQLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAE----------------RWSYHAVY 356 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH----------------hccchhHH
Confidence 899999987776665 7888898875 56799999999999999999999999988 34455555
Q ss_pred HHHHHHHHHHHHHHhhccc
Q 013991 220 LCISLFAFGVTIAAFWLPE 238 (432)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~e 238 (432)
...++..++..+...+++|
T Consensus 357 ~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 357 WFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHHHHHHHHHheecC
Confidence 7666666665555555543
No 133
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.52 E-value=5.3e-13 Score=124.22 Aligned_cols=163 Identities=22% Similarity=0.316 Sum_probs=137.1
Q ss_pred HHHhhccccchhhhHHHHHHHh-cCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChH-HHHHHHHHHHHHHH
Q 013991 50 VLCTALPISSLFPFLYFMIKDF-QIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKP-VIIMGTASVVIFNT 127 (432)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~-~l~~~~~~~~~~~~ 127 (432)
.+.............|.+.++. |.++.+ .++..+...++..++.++.|++.||+|||+ .+..+..+..++.+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 257 (352)
T cd06174 184 FFLLSFGYYGLLTYLPLYLQEVLGLSAAE------AGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLL 257 (352)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 3344444555666677666654 888888 999999999999999999999999999999 99999999999999
Q ss_pred HHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccc
Q 013991 128 LFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSS 206 (432)
Q Consensus 128 ~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw 206 (432)
.....++.+.+.+..++.|++.+...+. .+++.|..|+++|++.+++.+....+|..++|.+.+.+.+
T Consensus 258 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~----------- 326 (352)
T cd06174 258 LLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLD----------- 326 (352)
T ss_pred HHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------
Confidence 9999988999999999999998887776 9999999999999999999999999999999999999987
Q ss_pred cccccCccchHHHHHHHHHHHHHHHHHh
Q 013991 207 ESLFGKFPYFLPCLCISLFAFGVTIAAF 234 (432)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (432)
..+|+..+.+.+++.++..+...
T Consensus 327 -----~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 327 -----TGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred -----ccCcchHHHHHHHHHHHHHHHhe
Confidence 44455555777766666554443
No 134
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.50 E-value=4e-13 Score=128.39 Aligned_cols=162 Identities=17% Similarity=0.119 Sum_probs=129.7
Q ss_pred hhhhHHHHHHH-hcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhHHHH
Q 013991 60 LFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMA 138 (432)
Q Consensus 60 ~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l 138 (432)
.....|.+.++ +|.+..+ .|++.+...++..++.++.+++.||.++++.+..+.++.+++.++..+.++.+.+
T Consensus 242 ~~~~~p~~~~~~~g~~~~~------~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 315 (417)
T PRK10489 242 VRVLYPALADEVWQMGAAQ------IGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILA 315 (417)
T ss_pred HHHhhHHHHHhccCCChhH------hHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHH
Confidence 44556766666 8998888 9999999999999999999999999888888888888888888888888888888
Q ss_pred HHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccchH
Q 013991 139 VLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFL 217 (432)
Q Consensus 139 ~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~ 217 (432)
.++.++.|++.+...+. .+++.|..|++.|++++++++....+|..+||.+.|.+.+ ..+.+.
T Consensus 316 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~----------------~~g~~~ 379 (417)
T PRK10489 316 VLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGA----------------MMTPVA 379 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHH----------------Hhchhh
Confidence 88888899887776665 7899999999999999999999999999999999999998 334444
Q ss_pred HHHHHHHHHHH-HHHHHhhcccccCCC
Q 013991 218 PCLCISLFAFG-VTIAAFWLPETLHRH 243 (432)
Q Consensus 218 ~~~~~~~~~~~-~~~~~~~~~e~~~~~ 243 (432)
.+...+...++ ..+....+||.++.+
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (417)
T PRK10489 380 SASASGFGLLIIGVLLLLVLGELRRFR 406 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccc
Confidence 44544444333 444555667655443
No 135
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.50 E-value=4.9e-13 Score=127.48 Aligned_cols=159 Identities=18% Similarity=0.223 Sum_probs=123.8
Q ss_pred ccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhHH
Q 013991 57 ISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFW 136 (432)
Q Consensus 57 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~ 136 (432)
.....+..+.+.++.+.+..+ .....+.+.++..++..++.+..|+++||+|||+.+..+..+..++.+.....++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (408)
T PRK09874 235 TGSIAPILTLYVRELAGNVSN--IAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPL 312 (408)
T ss_pred HHHHHHHHHHHHHHHhccchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHH
Confidence 344456666666655433322 112246666777888889999999999999999999999888888887777778888
Q ss_pred HHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccc
Q 013991 137 MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPY 215 (432)
Q Consensus 137 ~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~ 215 (432)
.+++.+++.|++.+...+. .+.+.+..|+++|++.+++.+....+|..+||.++|.+.+ .++|
T Consensus 313 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~----------------~~g~ 376 (408)
T PRK09874 313 QLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISA----------------NYGF 376 (408)
T ss_pred HHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHh----------------hcch
Confidence 8889999999988887775 8888899999999999999999999999999999999988 4445
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 013991 216 FLPCLCISLFAFGVTIAA 233 (432)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~ 233 (432)
+..+.+.+++.++..+..
T Consensus 377 ~~~f~~~~~~~l~~~~~~ 394 (408)
T PRK09874 377 RAVFLVTAGVVLFNAVYS 394 (408)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 555577776666544443
No 136
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.49 E-value=2.3e-13 Score=131.17 Aligned_cols=149 Identities=17% Similarity=0.147 Sum_probs=118.1
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhcc--CChHHHHH-
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY--GRKPVIIM- 117 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~--Grr~~l~~- 117 (432)
+.++......++..+........+|.+.+++|.+..+ .+++.+...++..++.++.|+++||. ++|+...+
T Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 314 (455)
T TIGR00892 241 RGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYE------AAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFS 314 (455)
T ss_pred chHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHH
Confidence 3444444455555555555666777777888999888 99999999999999999999999984 34443333
Q ss_pred -HHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 118 -GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 118 -~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
+.++.+++.+++...++++.+++.+++.|++.+...+. .+++.|.+|++++++.+++++....+|..+||.++|.+.+
T Consensus 315 ~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~ 394 (455)
T TIGR00892 315 FALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVD 394 (455)
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeeh
Confidence 33444455556667788899999999999988887775 8899999999999999999999999999999999999987
No 137
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.49 E-value=2.6e-12 Score=121.58 Aligned_cols=179 Identities=12% Similarity=0.084 Sum_probs=126.0
Q ss_pred hHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHH
Q 013991 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (432)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 121 (432)
..+.+.+..++............|.+.+++|.+..+ .+...+.+.++..++.++.|++.||+|||+.+.++..+
T Consensus 206 ~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~------ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l 279 (393)
T PRK09705 206 RAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQY------SGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVL 279 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhh------hhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHH
Confidence 344344444444445555666777777788999888 99999999999999999999999999999999888877
Q ss_pred HHHHHHHHhh-hhhHHHHHHHHHHHhhhccchhhH-Hhhhhhhcc-cchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCC
Q 013991 122 VVIFNTLFGL-SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAE 198 (432)
Q Consensus 122 ~~~~~~~~~~-~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 198 (432)
..++..+... .++...+. -++.|++.+...+. .....+..+ +++|++..+..+....++..++|.+.|++.+..
T Consensus 280 ~~~~~~~~~~~~~~~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~- 356 (393)
T PRK09705 280 QLVGFCGFIWLPLQLPVLW--AMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSIS- 356 (393)
T ss_pred HHHHHHHHHHccchHHHHH--HHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 7777665543 22222222 24567776666564 556666664 678999999999999999999999999999822
Q ss_pred cCCCcccccccccCccchHHHHHHHHHHHHHHHH-HhhcccccCCC
Q 013991 199 KYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETLHRH 243 (432)
Q Consensus 199 ~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~ 243 (432)
| ++...+.+.++..++.+.. ..+.||+++++
T Consensus 357 ------g--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK09705 357 ------G--------NYLMDWAFHALCVVGLMIITLRFAPARFPQL 388 (393)
T ss_pred ------C--------CchHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 1 2444445555555544333 45567765544
No 138
>PRK12382 putative transporter; Provisional
Probab=99.48 E-value=1.1e-12 Score=124.29 Aligned_cols=154 Identities=21% Similarity=0.209 Sum_probs=122.5
Q ss_pred cccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhH
Q 013991 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (432)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 135 (432)
.........+.+.++.+.+ + .++..+.+.++..+++++.|++.||+|+|+.+..+..+..++.++..+.++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (392)
T PRK12382 231 GFAVIGTFVSLYFASKGWA--M------AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTA 302 (392)
T ss_pred HHhHHHHHHHHHHHhcCCc--h------hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccH
Confidence 3334445556666666654 3 5566677888889999999999999999999999999888888888888888
Q ss_pred HHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCcc
Q 013991 136 WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 214 (432)
Q Consensus 136 ~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~ 214 (432)
+.+++..++.|++.+...+. .+.+.|.+|+++|+++.++.+....+|..+||.+.+.+.+ ..+
T Consensus 303 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~----------------~~g 366 (392)
T PRK12382 303 WVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLAT----------------SFG 366 (392)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HhC
Confidence 88888899999988777665 7888999999999999999999999999999999999998 334
Q ss_pred chHHHHHHHHHHHHHHHHH
Q 013991 215 YFLPCLCISLFAFGVTIAA 233 (432)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~ 233 (432)
|+..+.+.+++.++..+..
T Consensus 367 ~~~~~~~~~~~~~~~~~~~ 385 (392)
T PRK12382 367 YPSVFLAGAISAVLGIIVT 385 (392)
T ss_pred chHHHHHHHHHHHHHHHHH
Confidence 4555566666665544443
No 139
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.47 E-value=1.8e-12 Score=122.30 Aligned_cols=129 Identities=20% Similarity=0.295 Sum_probs=104.4
Q ss_pred cchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhHHH
Q 013991 58 SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWM 137 (432)
Q Consensus 58 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 137 (432)
......+|.+.++.|.+..+ .++..+...++..+++++.|++.||+|+|+++..+..+..++.+... + ...
T Consensus 217 ~~~~~~lp~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~ 287 (381)
T PRK03633 217 GSLYGLMPLYLNHQGMSDAS------IGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAA 287 (381)
T ss_pred HHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHH
Confidence 33445678777888888888 89999999999999999999999999999999888877777665443 2 233
Q ss_pred HHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 138 AVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 138 l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
.....++.|++.+...|. .+.+.|..|+++++...+..+...++|..+||.++|++.+
T Consensus 288 ~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~ 346 (381)
T PRK03633 288 MAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQ 346 (381)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445667778765555665 8888999999888888888888999999999999999998
No 140
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.46 E-value=1.5e-12 Score=123.68 Aligned_cols=172 Identities=15% Similarity=0.235 Sum_probs=123.3
Q ss_pred hHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHH-HHHH
Q 013991 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII-MGTA 120 (432)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~-~~~~ 120 (432)
.++...+..++............|.+.+++|.+..+ .+.+.+...++..++.++.|+++||+|||+.+. .+.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~------~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l 296 (402)
T TIGR00897 223 NVLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSE------WLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGV 296 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhH------HHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Confidence 344444444444455555566778888889999888 889889999999999999999999999988764 3333
Q ss_pred HHHHHHHHHhh-----hhhHHHHHHHHHHHhhhccchhhHHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 121 SVVIFNTLFGL-----SVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 121 ~~~~~~~~~~~-----~~~~~~l~~~r~~~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
...++.+.... .++.+.+++..++.|++.+...+....+.|.. +++|++++|+.+....+|..++|.+++.+.+
T Consensus 297 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~ 375 (402)
T TIGR00897 297 GCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVPLAAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIG 375 (402)
T ss_pred HHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33333333322 23566677788888887666555555666754 5689999999999999999999999999998
Q ss_pred cCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhc
Q 013991 196 PAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL 236 (432)
Q Consensus 196 ~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (432)
.+++..++.+.+++.++..+...++
T Consensus 376 ----------------~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 376 ----------------FFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred ----------------hcchHHHHHHHHHHHHHHHHHHHHh
Confidence 4455555566666665554444443
No 141
>PRK03699 putative transporter; Provisional
Probab=99.45 E-value=1.6e-12 Score=123.24 Aligned_cols=147 Identities=11% Similarity=0.109 Sum_probs=115.1
Q ss_pred hHHHHHHHHHHhhccccchhhhHHHHH-HHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHH
Q 013991 42 ELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (432)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 120 (432)
.++...+..++............|.+. +++|.+..+ .+.+.+.+.++..++.++.|+++||+|||+.+.....
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~------~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~ 279 (394)
T PRK03699 206 GVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLED------AGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAG 279 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHH------hhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHH
Confidence 344444444544444455566777666 568999988 9999999999999999999999999999999988887
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
+..+...+....++.+.+.+..++.|++.+...+. .++..|..| +++++..+.......+|..++|.+.|.+.+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~ 354 (394)
T PRK03699 280 LALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVA 354 (394)
T ss_pred HHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 77777777767777777777777888876655554 667777665 456778888888899999999999999998
No 142
>PRK03545 putative arabinose transporter; Provisional
Probab=99.45 E-value=3.9e-12 Score=120.41 Aligned_cols=145 Identities=13% Similarity=0.128 Sum_probs=110.8
Q ss_pred HHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHH-HHHhhhhhHHHHHHHHH
Q 013991 65 YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFN-TLFGLSVNFWMAVLTRF 143 (432)
Q Consensus 65 ~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~r~ 143 (432)
|.+.+++|.+..+ .+++.+...++..+++++.|+++||+|||+... +..+..++. .+....++.+.+++..+
T Consensus 230 ~~l~~~~g~s~~~------~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~ 302 (390)
T PRK03545 230 PFVQQVAGLSENF------ATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSI 302 (390)
T ss_pred HHHHHhcCCCccH------HHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHH
Confidence 3455567888888 999999999999999999999999999887544 444344433 33445677788888888
Q ss_pred HHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccchHHHHHH
Q 013991 144 LLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCI 222 (432)
Q Consensus 144 ~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~ 222 (432)
+.|++.+...+. ...+.|..| ++|++++++.+....+|..+||.++|.+.+ .++++..+...
T Consensus 303 l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~----------------~~g~~~~~~~~ 365 (390)
T PRK03545 303 FWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSL----------------HLGLSSIGYVG 365 (390)
T ss_pred HHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------------ccChhHHHHHH
Confidence 999987666554 777778766 688999999999999999999999999998 44555555666
Q ss_pred HHHHHHHHHHH
Q 013991 223 SLFAFGVTIAA 233 (432)
Q Consensus 223 ~~~~~~~~~~~ 233 (432)
+++.++.++..
T Consensus 366 ~~~~~~~~~~~ 376 (390)
T PRK03545 366 AALALAALVWS 376 (390)
T ss_pred HHHHHHHHHHH
Confidence 66666544443
No 143
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.45 E-value=3.5e-12 Score=120.73 Aligned_cols=148 Identities=14% Similarity=0.112 Sum_probs=105.5
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHHH-HHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChH--HHH-
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKP--VII- 116 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~--~l~- 116 (432)
+.++...+..++............|.+. +++|.+..+ .+++.+...++..++.++.|+++||+|||+ ...
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 288 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILE------AGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFA 288 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHH------hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHH
Confidence 4455555666666666666677777554 568888888 899999999999999999999999999996 111
Q ss_pred -----HHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHH
Q 013991 117 -----MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALG 190 (432)
Q Consensus 117 -----~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 190 (432)
.+.++..+........++.+.......+.+.+.+ ..+. .+++.|.+|+++|++++++.+....+|..++|.+.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~ 367 (399)
T TIGR00893 289 RKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVI 367 (399)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHh
Confidence 1111111111112222344444444444444555 4554 99999999999999999999999999999999999
Q ss_pred hhhcc
Q 013991 191 GFLAQ 195 (432)
Q Consensus 191 ~~l~~ 195 (432)
+.+.+
T Consensus 368 g~l~~ 372 (399)
T TIGR00893 368 GAIAA 372 (399)
T ss_pred hhhcc
Confidence 99988
No 144
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.43 E-value=3.4e-12 Score=124.98 Aligned_cols=131 Identities=20% Similarity=0.245 Sum_probs=103.7
Q ss_pred chhhhHHHHH-HHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhh--hhH
Q 013991 59 SLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS--VNF 135 (432)
Q Consensus 59 ~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~ 135 (432)
.....+|.+. +++|.+..+ .+++.+...++..++.++.|+++||+|||+++..+.++..+..++.... .+.
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~------~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHT------VANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANV 366 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHH
Confidence 3456677666 588999988 9999999999999999999999999999999888877666655444332 344
Q ss_pred HHHHHHHHHHhh-hccchhhHHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 136 WMAVLTRFLLGS-LNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 136 ~~l~~~r~~~G~-~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
+.+.+..++.+. +.+......+++.|.+|+++|++.+++.+....+|..+||.++|.+.+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~ 427 (496)
T PRK03893 367 WVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQ 427 (496)
T ss_pred HHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhc
Confidence 444445555444 334333347889999999999999999999999999999999999998
No 145
>PRK09952 shikimate transporter; Provisional
Probab=99.43 E-value=6.2e-12 Score=120.73 Aligned_cols=168 Identities=15% Similarity=0.177 Sum_probs=113.9
Q ss_pred HhhccccchhhhHHHH-HHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHh
Q 013991 52 CTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG 130 (432)
Q Consensus 52 ~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~ 130 (432)
.............|.+ .+++|.+... ...+.....+...++.++.|+++||+|||+.+..+.++..++.+.+.
T Consensus 261 ~~~~~~~~~~~~~~~y~~~~~g~s~~~------~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~ 334 (438)
T PRK09952 261 CELLTMYIVTAFALNYSTQNLGLPREL------FLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFF 334 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 3333344445556644 5668887765 55555556667788889999999999999998888776655544332
Q ss_pred h---h-hhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHH-HHHHHHHHHHHHHHhhhcccCCcCCCcc
Q 013991 131 L---S-VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQPAEKYPNLF 204 (432)
Q Consensus 131 ~---~-~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~~~~~~~~ 204 (432)
. . ++.+.+++..++.+++.+...+. .++++|.+|++.|+.+.++.. .+..+|..++|.+.+++.+..
T Consensus 335 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~------- 407 (438)
T PRK09952 335 MALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYF------- 407 (438)
T ss_pred HHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc-------
Confidence 2 1 23444445556667776665554 889999999999998888864 445589999999999998621
Q ss_pred cccccccCccchHHHHHHHHHHHHHHHHHhhcccc
Q 013991 205 SSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPET 239 (432)
Q Consensus 205 gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 239 (432)
..+|..++...++..++..+..+.++|+
T Consensus 408 -------~~~~~~~~~~~~~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 408 -------GGSWHSVAIYLLAGCLISAMTALLMKDN 435 (438)
T ss_pred -------CCCchHHHHHHHHHHHHHHHHHHHcccc
Confidence 1235556666666666666666666663
No 146
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.42 E-value=5.1e-12 Score=122.93 Aligned_cols=174 Identities=17% Similarity=0.185 Sum_probs=123.9
Q ss_pred HHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHH
Q 013991 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (432)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 124 (432)
...+..+.............|.+.+++|.+..+ .++......++..++.++.|+++||+|||+.+.++.++..+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 361 (481)
T TIGR00879 288 GVVLQWFQQFTGINAIMYYSPTIFENAGVSTDH------AFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAI 361 (481)
T ss_pred HHHHHHHHHHhCCeehHHHHHHHHHHcCCCchH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 334444444445555666778888899998877 88899999999999999999999999999999998888877
Q ss_pred HHHHHhhh-----h------hHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhh
Q 013991 125 FNTLFGLS-----V------NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF 192 (432)
Q Consensus 125 ~~~~~~~~-----~------~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 192 (432)
+.++.++. + +...+....++.+.......+. ..++.|.+|+++|++++++.+....+|.+++|.+.+.
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~ 441 (481)
T TIGR00879 362 CLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPT 441 (481)
T ss_pred HHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77766521 1 2223333333333322223344 7788999999999999999999999999999999999
Q ss_pred hcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHH-Hhhccccc
Q 013991 193 LAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWLPETL 240 (432)
Q Consensus 193 l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e~~ 240 (432)
+.+ ..||+..| .+.++++++..+. .++.||++
T Consensus 442 ~~~-------~~~~~~~f---------~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 442 MLE-------SIGVGGVF---------IFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred HHH-------hcCcccee---------hhHHHHHHHHHHHHheecccCC
Confidence 987 34444443 5555555544333 44556644
No 147
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.42 E-value=1.7e-12 Score=122.90 Aligned_cols=147 Identities=20% Similarity=0.204 Sum_probs=110.9
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHH-HHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHH
Q 013991 43 LFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (432)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 121 (432)
++......++............|.+. +++|.+..+ .+...+...++..++.++.|+++||+|||+.+.....+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~ 294 (394)
T TIGR00883 221 FLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANS------ALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVL 294 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhH------HHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHH
Confidence 44444445555555555666677665 678888888 89999999999999999999999999999987765544
Q ss_pred HHHHH--HHHhh--hhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhH-HHHHHHHHHHHHHHHhhhcc
Q 013991 122 VVIFN--TLFGL--SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTV-STAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 122 ~~~~~--~~~~~--~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~~~~~l~~ 195 (432)
..+.. ..... .++.+.+++..++.|++.+...+. .+++.|.+|+++|+++.++. +....+|..++|.+++.+.+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~ 374 (394)
T TIGR00883 295 AALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVA 374 (394)
T ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHH
Confidence 44333 12222 246666777778888877666554 99999999999999999984 56667899999999999998
No 148
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.41 E-value=6.7e-10 Score=102.01 Aligned_cols=336 Identities=14% Similarity=0.055 Sum_probs=209.0
Q ss_pred HHHHHH-hcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 013991 65 YFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRF 143 (432)
Q Consensus 65 ~~~~~~-~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 143 (432)
|++.+. .|.+.+|. ..-+.-...-.+....++...++|..|.|++++++.+...+...+..+.++...+-+..+
T Consensus 28 ~yL~~~~kn~T~~qv-----~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~ 102 (412)
T PF01770_consen 28 PYLTGPDKNFTEEQV-----NNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQF 102 (412)
T ss_pred HHHcCCccCCCHHHH-----HHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHH
Confidence 555554 78887772 234445555667788889999999999999999999999999999999999999999999
Q ss_pred HHhhhccchhhHHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccchHHHHHHH
Q 013991 144 LLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCIS 223 (432)
Q Consensus 144 ~~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~ 223 (432)
+.|++.+.-.+-.+++-...|+++-.++.+...++.-+|-.++.++|..+... + ..++.....+..
T Consensus 103 ~yg~~~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~--------~------~~sy~~L~~isl 168 (412)
T PF01770_consen 103 FYGLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSF--------G------GVSYFQLNYISL 168 (412)
T ss_pred HHHHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------c------CCCHHHHHHHHH
Confidence 99998777555589998889999999999999999999999999999988761 1 334555555555
Q ss_pred HHHHHHHHHHhhcccccCC---CCCCCcchh---hhHHHhhhhhhhh--h-hhhc-----------cCCCCccccccchh
Q 013991 224 LFAFGVTIAAFWLPETLHR---HNDDDDSCD---VSYDALESASAEV--K-EEEG-----------REATPKKSLLKNWP 283 (432)
Q Consensus 224 ~~~~~~~~~~~~~~e~~~~---~~~~~~~~~---~~~~~~~~~~~~~--~-~~~~-----------~~~~~~~~~~~~~~ 283 (432)
....++++..+++|..++. ++...++.+ ...+..++..++. . +... .-.+..++..++|.
T Consensus 169 ~~~~~a~~~~~fLP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ 248 (412)
T PF01770_consen 169 ASVSLALLIALFLPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPR 248 (412)
T ss_pred HHHHHHHHHHHHcCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCch
Confidence 5555566666778775542 111111000 0000000000000 0 0000 01123344456776
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHH
Q 013991 284 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 363 (432)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 363 (432)
++.-.+-+.+.........++......+. ..-+-.....|..-+...+.+.++. +..+++..++.+...+.++...
T Consensus 249 ll~WSlWWa~atcgy~qv~nYvQ~LW~~v---~~~~~~~vYNG~VeA~~tllgA~~a-l~~g~v~~~w~~~~~l~l~~~S 324 (412)
T PF01770_consen 249 LLLWSLWWAFATCGYYQVINYVQSLWDTV---PPSDNESVYNGAVEAASTLLGAIAA-LLAGYVKVNWDRWGELALGVFS 324 (412)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCCCCCcccchHHHHHHHHHHHHHH-HHHhHhhcchHHHHHHHHHHHH
Confidence 66555544444433333333322221111 0123345567888888888888887 4778886666665555544433
Q ss_pred HH--HHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHHhh
Q 013991 364 TI--PLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFVKL 429 (432)
Q Consensus 364 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~~~ 429 (432)
.. ..++++.+..+.+ +.++..++.........+....-++....++.-|-+.|+..|+-+
T Consensus 325 ~l~a~~L~lm~~t~~Iw------v~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al 386 (412)
T PF01770_consen 325 LLQAGLLFLMSFTGNIW------VCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVAL 386 (412)
T ss_pred HHHHHHHHHHHHhhHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHH
Confidence 33 2333333332222 344555555555666677777777777888888888888777644
No 149
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.41 E-value=7.7e-12 Score=118.01 Aligned_cols=147 Identities=15% Similarity=0.127 Sum_probs=118.8
Q ss_pred hHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHH
Q 013991 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (432)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 121 (432)
.++......++............|.+.++.|.+..+ .|.+.+...++..+..++.|++.||+|+|+.+..+.++
T Consensus 206 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~ 279 (382)
T PRK11128 206 TVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSAST------IGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAIC 279 (382)
T ss_pred hHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhH------HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 344334434444444444555666666788999888 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHH-HHHHHHHHHHHHHHhhhcc
Q 013991 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVS-TAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 122 ~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~ 195 (432)
.+++.++.+.+++.+.+++..++.|++.+...+. ..++.+. +++++++..+..+ ...++|..+||.++|.+.+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~ 354 (382)
T PRK11128 280 GVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQ 354 (382)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988888888999999999999999988877665 7788776 6667788888885 5667888999999999998
No 150
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.39 E-value=8.4e-12 Score=120.98 Aligned_cols=149 Identities=16% Similarity=0.171 Sum_probs=110.1
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHH-HHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (432)
+.++...+..++............|.+ .+++|.+..+ .++..+...++..++.++.|+++||+|||+.+....
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~------a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~ 331 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKED------AINTFTLFEIGALVGSLLWGWLSDLANGRRALVACI 331 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHH
Confidence 345555555555555555566677754 5678999988 899999999999999999999999999998876654
Q ss_pred HHHHHHHHH--HhhhhhHHHHHHHHHHHhhhc-cchhhHHhhhhhhcccchhhhhhhhHHHHHHH-HHHHHHHHHhhhcc
Q 013991 120 ASVVIFNTL--FGLSVNFWMAVLTRFLLGSLN-GLLGPIKAYACEIFREEHQALGLSTVSTAWGI-GLIIGPALGGFLAQ 195 (432)
Q Consensus 120 ~~~~~~~~~--~~~~~~~~~l~~~r~~~G~~~-g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~ 195 (432)
.+..++... ....++.+.+.+.+++.|++. +..........|.+|+++|+++.|+.+...++ |..++|.+.|.+.+
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 332 ALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 444433322 223346666777888888643 32233346677999999999999999988886 77999999999987
No 151
>TIGR00895 2A0115 benzoate transport.
Probab=99.37 E-value=6.1e-12 Score=119.32 Aligned_cols=142 Identities=20% Similarity=0.264 Sum_probs=111.9
Q ss_pred HHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHH
Q 013991 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (432)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 125 (432)
.+...++............|.+.+++|.+..+ .++..+...++..++.++.|+++||+|||+.+....+.....
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 328 (398)
T TIGR00895 255 LWLLYFMLLVGVYFLTNWLPKLMVELGFSLSL------AATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFA 328 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHH
Confidence 33444444444555566678888899999888 999999999999999999999999999995554444443333
Q ss_pred HHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhh
Q 013991 126 NTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (432)
Q Consensus 126 ~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 193 (432)
.++.....+.+.+++..++.|++.+...+. .+++.|.+|+++|++++++.+....+|..+||.++|.+
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 329 VLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 333333566777778888999987777665 99999999999999999999999999999999999876
No 152
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.36 E-value=1.1e-11 Score=119.55 Aligned_cols=172 Identities=13% Similarity=0.069 Sum_probs=108.7
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHHHH-HhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhcc--CChHHH-H
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY--GRKPVI-I 116 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~--Grr~~l-~ 116 (432)
+.++...+..++...........+|.+.+ +.|.+..+ .++....+.++..++.++.|+++||+ |||+.. .
T Consensus 253 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~------~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~ 326 (452)
T PRK11273 253 KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDK------SSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGV 326 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHH
Confidence 33444445544444444555667786665 47888888 88888899999999999999999999 555432 2
Q ss_pred HHHHHHHHHHHHHhh--hhhHHHHHHHHHHHhhhccc-hhhHHhhhhhhcccchhhhhhhhHHHHHHHHHH-HHHHHHhh
Q 013991 117 MGTASVVIFNTLFGL--SVNFWMAVLTRFLLGSLNGL-LGPIKAYACEIFREEHQALGLSTVSTAWGIGLI-IGPALGGF 192 (432)
Q Consensus 117 ~~~~~~~~~~~~~~~--~~~~~~l~~~r~~~G~~~g~-~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~~~~~ 192 (432)
....+..++.+.... ..+.+...+..++.|.+... ......+..|.+|+++|+++.|+.+....+|.. .+|.+.|.
T Consensus 327 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~ 406 (452)
T PRK11273 327 FFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGY 406 (452)
T ss_pred HHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHH
Confidence 222333333322222 23444444444445543222 222245678999999999999999888888765 58999999
Q ss_pred hcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHh
Q 013991 193 LAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAF 234 (432)
Q Consensus 193 l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (432)
+.+ .+ +|+..+.+.+...++.++...
T Consensus 407 l~~-------~~---------g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 407 TVD-------FF---------GWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred HHH-------Hh---------cchHHHHHHHHHHHHHHHHHH
Confidence 998 33 344444666655555444443
No 153
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.36 E-value=1.4e-11 Score=120.50 Aligned_cols=178 Identities=15% Similarity=0.078 Sum_probs=107.6
Q ss_pred chhhhHHHHHHHhcCCccccchh----hh-hhH-HHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhh
Q 013991 59 SLFPFLYFMIKDFQIAKREEDIG----SY-AGY-VGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS 132 (432)
Q Consensus 59 ~~~~~~~~~~~~~~~s~~~~~~~----~~-~~~-~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 132 (432)
......|.+.++.|.+..+.... .+ ... ......++..++.++.++++||+|||++++++.++.+++..+.+..
T Consensus 306 ~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~ 385 (502)
T TIGR00887 306 GVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFA 385 (502)
T ss_pred ccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 34445677778888875431000 00 001 2333445666788899999999999999988888777776655543
Q ss_pred hh----HHHHHHHHHHHhhh-ccchhhHHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCccccc
Q 013991 133 VN----FWMAVLTRFLLGSL-NGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSE 207 (432)
Q Consensus 133 ~~----~~~l~~~r~~~G~~-~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~ 207 (432)
.+ ...+...-+...++ .+.......+.+|.+|++.|+++.++.+....+|.+++|.+.+.+.+..++.. |+.
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~ 462 (502)
T TIGR00887 386 YNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTK---GYP 462 (502)
T ss_pred HHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccc---ccc
Confidence 21 11111111111222 22222237778999999999999999999999999999999999887321100 000
Q ss_pred ccccCccchHHHHHHHHHHHHHHHHHhhcccccCC
Q 013991 208 SLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHR 242 (432)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 242 (432)
. ..++..++.+.++..++..+..+++||++.+
T Consensus 463 ~---~~~~~~~~~i~~~~~~~~~i~~~~lpEt~~~ 494 (502)
T TIGR00887 463 T---GIWMGHVLEIFALFMFLGILFTLLIPETKGK 494 (502)
T ss_pred c---cccchHHHHHHHHHHHHHHHHheEeccCCCC
Confidence 0 1123334455555555544455677987653
No 154
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.35 E-value=2.4e-11 Score=116.63 Aligned_cols=167 Identities=14% Similarity=0.046 Sum_probs=107.4
Q ss_pred hHHHHHHHHHHhhccccchhhhHHHHH-HHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhcc--CCh-HHHHH
Q 013991 42 ELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY--GRK-PVIIM 117 (432)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~--Grr-~~l~~ 117 (432)
.++.+.+..++...........+|.+. +++|.+..+ .+...+.+.++..++.++.|+++||+ ++| +....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~------a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~ 317 (434)
T PRK11663 244 YIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVT------ANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLI 317 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHH------HHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHH
Confidence 344444444444444445556677665 678999988 89999999999999999999999999 333 32222
Q ss_pred HHHH---HHHHHHHHhhhhhHHHHHHHHHHHhhhccchhh-HHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhh
Q 013991 118 GTAS---VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (432)
Q Consensus 118 ~~~~---~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 193 (432)
..+. ..++..... ..+...+.+..+..|++...... ....+.|.+|+++|++++|+.+....+|..++|.+.+++
T Consensus 318 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l 396 (434)
T PRK11663 318 FAAGILLSVGSLWLMP-FASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKV 396 (434)
T ss_pred HHHHHHHHHHHHHHcc-cccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHH
Confidence 2111 111111111 22333333444444543222222 255678999999999999999999999999999999999
Q ss_pred cccCCcCCCcccccccccCccchHHHHHHHHHHHHHHH
Q 013991 194 AQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTI 231 (432)
Q Consensus 194 ~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (432)
.+ ..+|...+.+.+++.++..+
T Consensus 397 ~~----------------~~g~~~~f~~~~~~~~~~~~ 418 (434)
T PRK11663 397 LE----------------IWHWTGFFVVISIAAGISAL 418 (434)
T ss_pred HH----------------hcccHHHHHHHHHHHHHHHH
Confidence 98 33445555666666555433
No 155
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.35 E-value=6e-12 Score=117.87 Aligned_cols=128 Identities=16% Similarity=0.185 Sum_probs=114.4
Q ss_pred hhHHHHHHH-hcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhh-HHHHH
Q 013991 62 PFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVN-FWMAV 139 (432)
Q Consensus 62 ~~~~~~~~~-~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~-~~~l~ 139 (432)
...|.+.++ +|.+..+ .+++.+...++..++.++.|++.||+|||+.+..+..+.+++.....+.++ .+.++
T Consensus 232 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTH------YGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFL 305 (365)
T ss_pred HHhHHHHHHHhCCchHH------HHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHH
Confidence 566777665 8888888 999999999999999999999999999999999888888888877777764 88888
Q ss_pred HHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 140 LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 140 ~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
+..++.|++.+...+. .+++.|..|+++|++..++.+....+|..++|.++|.+.+
T Consensus 306 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 306 VLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999988887775 8999999999999999999999999999999999999987
No 156
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.34 E-value=1.1e-11 Score=117.86 Aligned_cols=130 Identities=18% Similarity=0.262 Sum_probs=104.1
Q ss_pred hhhhHH-HHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHH-HHhhhhhHHH
Q 013991 60 LFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNT-LFGLSVNFWM 137 (432)
Q Consensus 60 ~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~-~~~~~~~~~~ 137 (432)
.....| ++.+++|.+..+ .+++.+...++..++.++.|++.||+|||+.+.++.++..+..+ .....++.+.
T Consensus 257 ~~~~~~~~~~~~~g~s~~~------~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (405)
T TIGR00891 257 IQDLLPTYLKADLGLSPHT------VANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAV 330 (405)
T ss_pred hhhhhHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHH
Confidence 334455 445678999888 99999999999999999999999999999998888766533332 3334456666
Q ss_pred HHHHHHHHhhhccchhh-HHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 138 AVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 138 l~~~r~~~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
+.+..++.|+..+...+ ..+++.|.+|+++|++++|+.+....+|..++|.++|.+.+
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~ 389 (405)
T TIGR00891 331 LGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQ 389 (405)
T ss_pred HHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666777765444444 48889999999999999999999999999999999999998
No 157
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.33 E-value=6.2e-11 Score=113.42 Aligned_cols=179 Identities=13% Similarity=0.178 Sum_probs=140.1
Q ss_pred hhHHHHHHHHHHhhccccchhhhHH-HHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCCh--HHHHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRK--PVIIM 117 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr--~~l~~ 117 (432)
+.++...++.++..-+.+.+..... +..+++|.+..+ ...+.-+..+..+++++++|++.||+|.| +++.+
T Consensus 281 ~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~------l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~ 354 (477)
T PF11700_consen 281 RQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQ------LIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLI 354 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHH
Confidence 4455555566655555555555555 445689999999 88888889999999999999999999999 88888
Q ss_pred HHHHHHHHHHHHhh--------hhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHH
Q 013991 118 GTASVVIFNTLFGL--------SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPA 188 (432)
Q Consensus 118 ~~~~~~~~~~~~~~--------~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 188 (432)
+++...+..+...+ .++.+.+.+.-++.|+..|...+. .++.+|+.|+++.+..+|++....-....+||+
T Consensus 355 ~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPl 434 (477)
T PF11700_consen 355 SLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPL 434 (477)
T ss_pred HHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence 88877665555444 567788999999999999988886 999999999999999999999999999999999
Q ss_pred HHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhccccc
Q 013991 189 LGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETL 240 (432)
Q Consensus 189 ~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 240 (432)
+.+.+.+.++ +.|..+....++.++.++.+.++++.+
T Consensus 435 l~g~i~~~tg---------------~~r~g~~~l~~lf~~gl~ll~~v~~~~ 471 (477)
T PF11700_consen 435 LFGLITDATG---------------SQRYGFLFLLVLFLIGLILLFFVDVEK 471 (477)
T ss_pred HHHHHHHHhC---------------CchhHHHHHHHHHHHHHHHHhhccchh
Confidence 9999998432 234444555556566666666665543
No 158
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.32 E-value=3.8e-11 Score=115.17 Aligned_cols=130 Identities=19% Similarity=0.229 Sum_probs=98.9
Q ss_pred hhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhHHHHH
Q 013991 60 LFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAV 139 (432)
Q Consensus 60 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~ 139 (432)
+...+|.+.++.|.+..+ .+...+...++..++.++.|++.||+|||+.+..+.++..+..+.....++.....
T Consensus 250 ~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (426)
T PRK12307 250 IFGLLPTYLAGEGFDTGV------VSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLL 323 (426)
T ss_pred HHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHH
Confidence 445667777778888877 88888999999999999999999999999999888877766655444332211122
Q ss_pred HHHHHHhh--hccchhh-HHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 140 LTRFLLGS--LNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 140 ~~r~~~G~--~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
+.-.+.|+ +.....+ ...++.|.+|+++|++++|+......+|..++|.+.+++.+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~ 382 (426)
T PRK12307 324 LGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGI 382 (426)
T ss_pred HHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHH
Confidence 22223333 2222333 37788999999999999999999999999999999999987
No 159
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.32 E-value=1e-08 Score=95.98 Aligned_cols=354 Identities=13% Similarity=0.073 Sum_probs=197.5
Q ss_pred hHHHHHHHHHHhhccccchhhhHHHHHHHhcCC-ccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHH
Q 013991 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIA-KREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (432)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 120 (432)
....+....++...+.-+.....+.+..+...+ --. .+...-.-.+..++.++..|.+.||..|.++...+.+
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~------~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~ 76 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLP------VSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLV 76 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHH------HHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHH
Confidence 345677788888888888888888777776442 222 4555555566778889999999999999998766654
Q ss_pred HHH----HHHHHHhh--h--h----hHHH---HHHHHHHHhhhccchhhH--Hhhhhhh----c--ccchhhhhhhhHHH
Q 013991 121 SVV----IFNTLFGL--S--V----NFWM---AVLTRFLLGSLNGLLGPI--KAYACEI----F--REEHQALGLSTVST 177 (432)
Q Consensus 121 ~~~----~~~~~~~~--~--~----~~~~---l~~~r~~~G~~~g~~~~~--~~~i~~~----~--~~~~r~~~~~~~~~ 177 (432)
.-- +++.+... . . +-+. +++.-.+.|.-.-....+ .++=.|| . +++.+.+..+.+.-
T Consensus 77 ~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRR 156 (432)
T PF06963_consen 77 VQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRR 156 (432)
T ss_pred HHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHH
Confidence 432 22222221 1 1 1121 222222222211111112 1112333 2 34455566666655
Q ss_pred HHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHH-Hhhc----ccccC---CCCCCCcc
Q 013991 178 AWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIA-AFWL----PETLH---RHNDDDDS 249 (432)
Q Consensus 178 ~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~e~~~---~~~~~~~~ 249 (432)
.=-+.-+++|++.|.+.+ ..+......+.+...++.+.. .+++ .+.|. +++.++++
T Consensus 157 IDL~ckllaPl~vG~l~t----------------~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~ 220 (432)
T PF06963_consen 157 IDLFCKLLAPLFVGLLMT----------------FASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESE 220 (432)
T ss_pred HHHHHHHHHHHHHHHHhh----------------ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCcccc
Confidence 566789999999999987 333333334344333332222 1211 12221 11111111
Q ss_pred hhhhHH------HhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccc
Q 013991 250 CDVSYD------ALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQ 323 (432)
Q Consensus 250 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ 323 (432)
.+...+ ......+...+.-++....++..++++.+.... ...+.++...++......|+... |+++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~-alalLY~TVLsf~~lmt~yl~~~------G~s~~ 293 (432)
T PF06963_consen 221 SSSDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASF-ALALLYFTVLSFGGLMTAYLKSQ------GYSPS 293 (432)
T ss_pred ccccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHH-HHHHHHHHHhcCcHHHHHHHHHC------CCCHH
Confidence 110000 000000011111222345677778877665544 44444444567788888888875 99999
Q ss_pred hhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHHHHHHhhHHHhhhh----hHHHHHHHHHHHHHHhhhhh
Q 013991 324 MVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSG----FGLAFLLNCASVVKNLLSVS 399 (432)
Q Consensus 324 ~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 399 (432)
..|.+-+...+.++.+. ++.+++.+|+|..+.-.++.......+.+....-..++ ......++.+..+.-++--+
T Consensus 294 ~igi~R~~gav~Gl~gT-~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~ 372 (432)
T PF06963_consen 294 VIGIFRGLGAVFGLLGT-WVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWS 372 (432)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHh
Confidence 99999999999999988 69999999999988877776655443332222111111 12223333344443333344
Q ss_pred HHHHHHHHHhccccccchhhhhhHHH
Q 013991 400 IITGLFILQNRAVVRVLTYTLSCHFW 425 (432)
Q Consensus 400 ~~~~~~~~~~~~~p~~~~g~~~~~~~ 425 (432)
+=.+.+.++.|.+|+++||+.+|+=.
T Consensus 373 fDL~~~qi~Qe~V~~~~Rg~v~gvq~ 398 (432)
T PF06963_consen 373 FDLAVTQIMQENVPESERGAVSGVQN 398 (432)
T ss_pred hhHHHHHhhcccCCHHHhhHHHHHHH
Confidence 44567778899999999999988643
No 160
>PRK10504 putative transporter; Provisional
Probab=99.31 E-value=4.6e-11 Score=116.12 Aligned_cols=149 Identities=15% Similarity=0.176 Sum_probs=116.5
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHHHH-HhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (432)
+.+.......++............|++.+ .+|.++.+ .++......++..++.++.|++.||+|||+++..+.
T Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~ 334 (471)
T PRK10504 261 RTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFH------AGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATT 334 (471)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHH
Confidence 34444445555555555555556676665 58888887 899998888888888999999999999999999998
Q ss_pred HHHHHHHHHHhhh---hhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 120 ASVVIFNTLFGLS---VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 120 ~~~~~~~~~~~~~---~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
++..+...+..+. ++.+.+.+..++.|++.+...+. ..++.+..|+++|+.+.++.+....+|..+|+.+++.+.+
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~ 414 (471)
T PRK10504 335 LGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLG 414 (471)
T ss_pred HHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888776666553 33444455667778877766554 8888899999999999999999999999999999999887
No 161
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.31 E-value=1.4e-10 Score=112.17 Aligned_cols=137 Identities=18% Similarity=0.252 Sum_probs=121.3
Q ss_pred hhccccchhhhHHHHH-HHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhh
Q 013991 53 TALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL 131 (432)
Q Consensus 53 ~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 131 (432)
..+....+...+|.+. +++|.+... .|++.+++.+|.+++++..+++.+|+++++.+..+.++.+++.+..++
T Consensus 230 ~~l~~~a~~aLlPl~a~~~l~~~a~~------yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal 303 (524)
T PF05977_consen 230 FNLFASAVWALLPLFARDVLGGGASG------YGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLAL 303 (524)
T ss_pred HHHhhhHHHHhhhHHHHHHhCCcHHH------HHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhc
Confidence 3333344456678665 568888888 999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 132 SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 132 ~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
+++.+..++.-++.|++.....+. .+.+.+..|++.|||.++++++....+..+|..+.|.+.+
T Consensus 304 ~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~ 368 (524)
T PF05977_consen 304 SPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLAD 368 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999987776654 8899999999999999999999999999999999999998
No 162
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.30 E-value=1.5e-10 Score=105.72 Aligned_cols=173 Identities=14% Similarity=0.149 Sum_probs=130.0
Q ss_pred CchhHHHHHHHHHHhhccccchhhhH-HHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHH
Q 013991 39 PITELFSIWIIVLCTALPISSLFPFL-YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (432)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~ 117 (432)
+++.++...+..++...+......++ |.+.+..|.+.+. ++++.-.|.++..+++.+.|+++|| +.|+.+..
T Consensus 209 ~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~------vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~ 281 (394)
T COG2814 209 RRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSA------VSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIA 281 (394)
T ss_pred cCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhH------HHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHH
Confidence 34456655666666666555555555 6777788999998 9999999999999999999999999 88888888
Q ss_pred HHHHHHHHHHHHhhh-hhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 118 GTASVVIFNTLFGLS-VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 118 ~~~~~~~~~~~~~~~-~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
...+..+..+...+. ++.+..++.-++.|++.+..... ..-+++ ..||.+..+.++....+++|..+|..+||.+.+
T Consensus 282 ~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~ 360 (394)
T COG2814 282 ALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLD 360 (394)
T ss_pred HHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877777766665554 45555555656666655544443 555555 447889999999999999999999999999999
Q ss_pred cCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhh
Q 013991 196 PAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFW 235 (432)
Q Consensus 196 ~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (432)
++++..+..+.+++.+..++..+.
T Consensus 361 ----------------~~g~~~~~~~~a~l~~~a~~~~~~ 384 (394)
T COG2814 361 ----------------ALGYAATGWVGAALLLLALLLALL 384 (394)
T ss_pred ----------------hhchHHHHHHHHHHHHHHHHHHHH
Confidence 556666667777777766555444
No 163
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.29 E-value=5.2e-11 Score=113.01 Aligned_cols=129 Identities=16% Similarity=0.083 Sum_probs=105.9
Q ss_pred hhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-Hhhhhhh
Q 013991 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEI 162 (432)
Q Consensus 84 ~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~ 162 (432)
.|.+.+...+...++.+..|++.||+|||+.+.++.++.++...+...+++.+.+++.+++.|++.+..... ..+..+.
T Consensus 256 ~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 335 (396)
T TIGR00882 256 FGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQ 335 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 788888888889999999999999999999999999988888888788889998899999999886555443 6677788
Q ss_pred cccchhhhhhhh-HHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHH
Q 013991 163 FREEHQALGLST-VSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFG 228 (432)
Q Consensus 163 ~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~ 228 (432)
.+++.++...+. .+....+|..++|.++|++.+ ..+|+.++.+.++..++
T Consensus 336 ~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~----------------~~G~~~~f~~~~~~~~i 386 (396)
T TIGR00882 336 FDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYD----------------SIGFQGAYLVLGCIVLL 386 (396)
T ss_pred CCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHH----------------hcccHHHHHHHHHHHHH
Confidence 888888777666 578899999999999999998 44455555666655544
No 164
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.26 E-value=3.3e-10 Score=106.71 Aligned_cols=168 Identities=18% Similarity=0.226 Sum_probs=120.0
Q ss_pred hhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhh
Q 013991 53 TALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS 132 (432)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 132 (432)
..-+.+.+..+...+.++-|++.++ +.+.+....+...+..+++..+.||+|||+.++++..+..+..+++...
T Consensus 282 q~sGi~ai~~Yst~i~~~aG~~~~~------a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~ 355 (485)
T KOG0569|consen 282 QFSGINAIFFYSTSIFKTAGFTPEE------AQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIA 355 (485)
T ss_pred HhcCcceeHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 3445556666667888999999998 8899999999999999999999999999999999999998888777653
Q ss_pred h----hH--H---HHHHHHHHHhhhccc-hhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCC
Q 013991 133 V----NF--W---MAVLTRFLLGSLNGL-LGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (432)
Q Consensus 133 ~----~~--~---~l~~~r~~~G~~~g~-~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 201 (432)
. .. | ..+++.++..++.+. ..|. .-+.+|.+|++.|..+++.......++..+-...-..+.+
T Consensus 356 ~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~------ 429 (485)
T KOG0569|consen 356 LFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQN------ 429 (485)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 2 11 1 122333334443222 3454 8889999999999999999888888777766666666655
Q ss_pred CcccccccccCccchHHHHHHHHHHH-HHHHHHhhcccccCCC
Q 013991 202 NLFSSESLFGKFPYFLPCLCISLFAF-GVTIAAFWLPETLHRH 243 (432)
Q Consensus 202 ~~~gw~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~~~~ 243 (432)
.++- ..++...+..+ ..+..++.+||++.+.
T Consensus 430 ----------~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~ 461 (485)
T KOG0569|consen 430 ----------VIGP-YVFILFVIPLAIFLIYLYRYLPETKGRT 461 (485)
T ss_pred ----------Hhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCC
Confidence 1121 11233444443 3556677899987554
No 165
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.26 E-value=1.5e-10 Score=110.14 Aligned_cols=334 Identities=17% Similarity=0.171 Sum_probs=188.1
Q ss_pred hhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccC-----ChHHHHHHHHHHHHHHHHHhhh---
Q 013991 61 FPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG-----RKPVIIMGTASVVIFNTLFGLS--- 132 (432)
Q Consensus 61 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~G-----rr~~l~~~~~~~~~~~~~~~~~--- 132 (432)
.+..|.+.+++|.++++ ...+.+...+.. ...+++|.++|-+. ||+-++++.++..++.+.++..
T Consensus 10 ~~~~~~l~~~l~ls~~~------~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~ 82 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQ------LQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPAS 82 (433)
T ss_pred HHHHHHHHHHcCCCHHH------HHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccc
Confidence 45567888999999999 777777777775 45889999999763 5666777777776666655543
Q ss_pred -hhHHHHHHHHHHHhhhccchhhH-Hhhhhhhcc--cchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccc
Q 013991 133 -VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR--EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSES 208 (432)
Q Consensus 133 -~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~--~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~ 208 (432)
.+.....+.-++..+|......+ -+++.|... +++|+...+.......+|.+++..++|.+.+ ..+.+.
T Consensus 83 ~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~-------~~~~~~ 155 (433)
T PF03092_consen 83 ESSAAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLD-------SFGPQG 155 (433)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhh-------cCCCeE
Confidence 24555555556666666666554 777777773 3448888889899999999999999999988 344444
Q ss_pred cccCccchHHHHHHHHHHHHHH-HHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccchhHHHH
Q 013991 209 LFGKFPYFLPCLCISLFAFGVT-IAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSS 287 (432)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (432)
.| .+.+.+..+.. ...+..+|.+++...+...... ++.+... . .-++.....++.++++.++..
T Consensus 156 ~f---------~i~~~~~~l~~~~~~~~~~e~~~~~~~~~~~~~~--~~~~~~~-~---~~~~~~~~l~~~~~~~~i~~~ 220 (433)
T PF03092_consen 156 VF---------LISAALPLLMLIVALFLLEERKVRPADEVFSFGK--EEVPCLF-G---SFREQLSELWRALQQRAIWQP 220 (433)
T ss_pred Ee---------hHHHHHHHHHHHHHHHhhhhccccccchhhcccc--cccchhh-H---HHHHHHHHHHHHHhhhHHHHH
Confidence 43 45554444433 3344455522111110000000 0000000 0 001111234455666777766
Q ss_pred HH-HHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHH
Q 013991 288 II-VYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIP 366 (432)
Q Consensus 288 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 366 (432)
.+ ..++.......... -..|...+. ..+.++++...|.+..+..++..++. .+..+.-.+.+-|++.....++..+
T Consensus 221 ~~~~~~~~~~~~~~~~a-~~fy~~~~~-~~gp~fs~~f~~~~~~vg~~~~l~g~-~~y~~~~~~~~~R~~~~~t~~~~~~ 297 (433)
T PF03092_consen 221 ILFFIFFFNLPPSISSA-SSFYFQTDA-LGGPHFSPSFYGTLSIVGSIASLLGI-LLYRKYFSNWSWRRIFVVTTLVSVL 297 (433)
T ss_pred HHHHHHHHHhccCCCCc-cEEEEEecc-ccccccCHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 55 22222222111111 011222221 11445899999988877777777765 4555555666777777666655544
Q ss_pred HHHHh-hHHHhhh---h-hHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 367 LLTSY-PYIAMLS---G-FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 367 ~~~~~-~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
..+.- ......+ + ...+. ...-..+........+-....++++..|+...|+.+|+...+
T Consensus 298 ~~l~~~~lv~~~n~~~Gi~d~~f-~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~ 362 (433)
T PF03092_consen 298 ASLFDLLLVTRWNLDLGIPDQWF-ALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASF 362 (433)
T ss_pred HhcccEEEEEEEeeeeCcCCeEE-EEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHH
Confidence 32221 1111000 0 00111 111222233334444455677889999999999999887654
No 166
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.25 E-value=6.5e-11 Score=114.82 Aligned_cols=153 Identities=10% Similarity=0.051 Sum_probs=97.3
Q ss_pred hhhHHHH-HHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCCh-------HHHHHHHHHHHHHHHHHhhh
Q 013991 61 FPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRK-------PVIIMGTASVVIFNTLFGLS 132 (432)
Q Consensus 61 ~~~~~~~-~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr-------~~l~~~~~~~~~~~~~~~~~ 132 (432)
....|.+ .+++|.+..+ .+.+.+.+.++..++.++.|+++||+||| ....+..++.++..++....
T Consensus 272 ~~~~p~~l~~~~g~s~~~------a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~ 345 (476)
T PLN00028 272 DNIIAEYFYDRFGLSLET------AGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRA 345 (476)
T ss_pred HhHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhccc
Confidence 3445544 5668999888 99999999999999999999999999865 23333334444444444555
Q ss_pred hhHHHHHHHHHHHhhhccchhh-HHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCccccccccc
Q 013991 133 VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFG 211 (432)
Q Consensus 133 ~~~~~l~~~r~~~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~ 211 (432)
++.+...+.-++.+++.+.... ..+++.+.. +++|+...|+.+.+..+|..++|.+.+ ..+
T Consensus 346 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~---------------- 407 (476)
T PLN00028 346 NSLGAAIVVMILFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLFF-TGS---------------- 407 (476)
T ss_pred chHHHHHHHHHHHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHHH-hcC----------------
Confidence 5655555555555554333333 355566654 578999999987776666666665533 111
Q ss_pred CccchHHHHHHHHHHHHHHHHHhhcc
Q 013991 212 KFPYFLPCLCISLFAFGVTIAAFWLP 237 (432)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (432)
..+|...+.+.+++.++..+..++++
T Consensus 408 ~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 408 SYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred CccHhhHHHHHHHHHHHHHHHHHhee
Confidence 22345555666666666655555554
No 167
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.25 E-value=8.4e-11 Score=111.34 Aligned_cols=158 Identities=15% Similarity=0.122 Sum_probs=109.9
Q ss_pred HHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHh-HHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHH
Q 013991 51 LCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFM-FGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF 129 (432)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~-~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~ 129 (432)
++............+.+.+|.|.++++ .|++..... ....++.++.|++.||+|+|+.+..+.++..+..+..
T Consensus 218 ~l~~~~~~~~~~~~~~~l~~~G~s~~~------ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~ 291 (390)
T TIGR02718 218 LLSAMTAVSGFGLSKLYLVDAGWPLEW------IGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLW 291 (390)
T ss_pred HHHHHHHHHHHHHhhHHHHhcCCCHHH------HHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 333333334444566677788999998 999888776 4666778999999999999999988776653333222
Q ss_pred hh------hhhHHHHHHHHHHHhhhccchhhH-Hhhhhhhccc-chhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCC
Q 013991 130 GL------SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE-EHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYP 201 (432)
Q Consensus 130 ~~------~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 201 (432)
.. .++...+.....+.+++.+...+. .+.+.+..++ +++++.++..+...++|..+||.++|.+.+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~------ 365 (390)
T TIGR02718 292 FAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTD------ 365 (390)
T ss_pred HHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 21 123333444445556666666554 7776677765 889999999999999999999999999998
Q ss_pred CcccccccccCccchHHHHHHHHHHHHHH
Q 013991 202 NLFSSESLFGKFPYFLPCLCISLFAFGVT 230 (432)
Q Consensus 202 ~~~gw~~~~~~~~~~~~~~~~~~~~~~~~ 230 (432)
..++...+...+++.++.+
T Consensus 366 ----------~~G~~~~f~~~~~~~l~a~ 384 (390)
T TIGR02718 366 ----------RFGYAGGFLSGTVLAVLAI 384 (390)
T ss_pred ----------HHccHHHHHHHHHHHHHHH
Confidence 3445555566655554443
No 168
>TIGR00898 2A0119 cation transport protein.
Probab=99.25 E-value=6.9e-11 Score=115.98 Aligned_cols=137 Identities=20% Similarity=0.118 Sum_probs=103.1
Q ss_pred HHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhH--HHHHHHHHHHhhhccchhhH-Hhhhhhhcc
Q 013991 88 GSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF--WMAVLTRFLLGSLNGLLGPI-KAYACEIFR 164 (432)
Q Consensus 88 ~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~ 164 (432)
.....+...++.++.+++.||+|||+.+.++.++.+++.++..+.++. +...+.-++.+++.+...+. ..+.+|.+|
T Consensus 361 ~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 440 (505)
T TIGR00898 361 LFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYP 440 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 344556677888999999999999999999999988888877776543 44444445555555554454 889999999
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCC
Q 013991 165 EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHR 242 (432)
Q Consensus 165 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 242 (432)
++.|++++|+.+....+|.+++|.+.+ +.+ .++..++.+.++..++..+..+++||+..+
T Consensus 441 ~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~lpet~~~ 500 (505)
T TIGR00898 441 TVVRNLGVGVCSTMARVGSIISPFLVY-LGE-----------------KWLFLPLVLFGGLALLAGILTLFLPETKGV 500 (505)
T ss_pred HHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH-----------------HHHhhHHHHHHHHHHHHHHHHHcCcCCCCC
Confidence 999999999999999999999999988 432 223445566666666666666778887543
No 169
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.24 E-value=3e-11 Score=116.27 Aligned_cols=148 Identities=14% Similarity=0.180 Sum_probs=109.6
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHHHHH-hcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (432)
+.++...+..++............+++.++ ++ +..+ .+++.+...++..++.+++++++||+|+|+.+.++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~ 294 (437)
T TIGR00792 222 DQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPEL------FSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGI 294 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 344444444444444333333333444433 33 3444 677778889999999999999999999999999998
Q ss_pred HHHHHHHHHHhhh-hhHHHHHHHHHHHhhhccchhhH-Hhhhhhhcc-------cchhhhhhhhHHHHHHHHHHHHHHHH
Q 013991 120 ASVVIFNTLFGLS-VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-------EEHQALGLSTVSTAWGIGLIIGPALG 190 (432)
Q Consensus 120 ~~~~~~~~~~~~~-~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~ 190 (432)
++.+++.+...+. ++.+.+++..++.|++.+...+. .++++|..+ ++++|...++.+....+|..+++.+.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~ 374 (437)
T TIGR00792 295 LLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLV 374 (437)
T ss_pred HHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888887776664 45667777778888888777665 888888865 45679999999999999999999999
Q ss_pred hhhcc
Q 013991 191 GFLAQ 195 (432)
Q Consensus 191 ~~l~~ 195 (432)
+.+.+
T Consensus 375 g~ll~ 379 (437)
T TIGR00792 375 GLILG 379 (437)
T ss_pred HHHHH
Confidence 99987
No 170
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.24 E-value=6.8e-10 Score=108.25 Aligned_cols=132 Identities=17% Similarity=0.150 Sum_probs=99.1
Q ss_pred ccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhh--h
Q 013991 57 ISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSV--N 134 (432)
Q Consensus 57 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~ 134 (432)
........|.+.++.|.+..+ .++......+...++.++.|+++||+|||++++.+.++.+++.++++... +
T Consensus 287 ~~~~~~~~p~i~~~~g~~~~~------~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~ 360 (479)
T PRK10077 287 INVVLYYAPEIFKTLGASTDI------ALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQ 360 (479)
T ss_pred hhHHHHHHHHHHHHcCCCCch------HHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 334445568888889988776 67777778888899999999999999999999999999888877765432 1
Q ss_pred H-H-HHHHHHHHHhhhccc-hhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhc
Q 013991 135 F-W-MAVLTRFLLGSLNGL-LGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (432)
Q Consensus 135 ~-~-~l~~~r~~~G~~~g~-~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (432)
. + ....+-++.+.+.+. ..+. ..+++|.+|+++|++++++.+....+|.++++.+.+.+.
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~ 424 (479)
T PRK10077 361 APGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMD 424 (479)
T ss_pred cccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 1 1 222233334443332 3354 899999999999999999999999999998877766554
No 171
>PRK15075 citrate-proton symporter; Provisional
Probab=99.24 E-value=1.2e-10 Score=111.76 Aligned_cols=137 Identities=18% Similarity=0.175 Sum_probs=98.1
Q ss_pred hhccccchhhhHHHHHHH-hcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHH-HHh
Q 013991 53 TALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNT-LFG 130 (432)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~-~~~ 130 (432)
............|.+.++ +|.+..+ .++....+.++..++.++.|+++||+|||+++.++.++..+... ...
T Consensus 250 ~~~~~~~~~~~~p~~l~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~ 323 (434)
T PRK15075 250 TTVSFYLITVYTPTFGKTVLHLSAAD------SLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALS 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 344444566667776654 7998888 88888889999999999999999999999998876544433221 111
Q ss_pred ---hhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHH-HHHHHHHHHHHHHhhhcc
Q 013991 131 ---LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVST-AWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 131 ---~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~ 195 (432)
..++...+.+..++.|++.+...+. ..++.|.+|+++|+.++++... +..++..++|.+.+++.+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~ 393 (434)
T PRK15075 324 WLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIH 393 (434)
T ss_pred HHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHH
Confidence 1234444444455566665555554 7788999999999999998644 444557789999999988
No 172
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.24 E-value=5.7e-11 Score=111.80 Aligned_cols=147 Identities=16% Similarity=0.152 Sum_probs=102.0
Q ss_pred HHHHHHHHHHhhccccchhhhHHHH-HHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCC-hHHHH-HHH
Q 013991 43 LFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR-KPVII-MGT 119 (432)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~~l~-~~~ 119 (432)
++.+.+..++............|.+ .+++|.+..+ .++..+...++..++.++.|++.||.++ |+... ...
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~ 291 (379)
T TIGR00881 218 LWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEK------ASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFF 291 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHH
Confidence 3444444454444445555666655 4567998888 9999999999999999999999998643 33222 221
Q ss_pred -HHHHHHHHHHhh--hhhHHHHHHHHHHHhhhccchhh-HHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 120 -ASVVIFNTLFGL--SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 120 -~~~~~~~~~~~~--~~~~~~l~~~r~~~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
....++...... ..+.+...+..++.|+......+ ...+..|..|+++|+++.++.+....+|..++|.+.|.+.+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 371 (379)
T TIGR00881 292 MALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLAD 371 (379)
T ss_pred HHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHH
Confidence 222222222222 23455555666677765433333 47788999999999999999999999999999999999998
No 173
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.24 E-value=2e-10 Score=109.37 Aligned_cols=127 Identities=13% Similarity=-0.003 Sum_probs=101.2
Q ss_pred hhHHHH-HHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhh-----hhH
Q 013991 62 PFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS-----VNF 135 (432)
Q Consensus 62 ~~~~~~-~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~ 135 (432)
...|.+ .+++|.++.+ .++......++..++.++.|+++||+|+|+.+.++.++..++.++.... ++.
T Consensus 236 ~~~p~~~~~~~g~~~~~------~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 309 (406)
T PRK15402 236 ALSPVILISGEQLSSYE------YGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAY 309 (406)
T ss_pred HHhHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccH
Confidence 344544 5678888887 8888888888889999999999999999999999888777777766553 355
Q ss_pred HHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 136 WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 136 ~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
+.+++.-++.|++.+...+. ...... .++++|++..+..+....+|..+|+.+++.+.+
T Consensus 310 ~~~~~~~~~~g~g~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~ 369 (406)
T PRK15402 310 LWLTAGLSLYAFGIGLANAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYL 369 (406)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHhh-hccccccHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 66777788888887776554 444433 345899999999999999999999999999877
No 174
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.23 E-value=1.7e-10 Score=110.97 Aligned_cols=176 Identities=11% Similarity=0.052 Sum_probs=106.8
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHHHH-hcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHH
Q 013991 43 LFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (432)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 121 (432)
++...+..++............|.+.++ .|.+..+ .++....+.++..++.++.|+++||+++++....+..+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~------~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~ 326 (438)
T TIGR00712 253 LWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDK------SSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFF 326 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhh------HHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHH
Confidence 3333344444443334455667766554 6888888 89999999999999999999999999754322223222
Q ss_pred HH---HHHHHHhh--hhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHH-HHHHHHHHhhhc
Q 013991 122 VV---IFNTLFGL--SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIG-LIIGPALGGFLA 194 (432)
Q Consensus 122 ~~---~~~~~~~~--~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g-~~~g~~~~~~l~ 194 (432)
.. ++.+.+.. ..+.+...+.-++.|.+....... .....|.+|+++|+++.|+.+....+| ..+||.+.|.+.
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~ 406 (438)
T TIGR00712 327 MTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTV 406 (438)
T ss_pred HHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHH
Confidence 21 12222212 123333333444455432222222 456789999999999999998877776 578999999999
Q ss_pred ccCCcCCCcccccccccCccchHHHHHHHHHHHH-HHHHHhhccccc
Q 013991 195 QPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFG-VTIAAFWLPETL 240 (432)
Q Consensus 195 ~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~ 240 (432)
+ ..| |...+.+.+...++ .+...+.+||.+
T Consensus 407 ~-------~~g---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 407 D-------FFG---------WDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred H-------hcc---------chHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 8 333 34444554444443 334455666643
No 175
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.23 E-value=3e-10 Score=106.14 Aligned_cols=148 Identities=12% Similarity=0.037 Sum_probs=110.0
Q ss_pred hHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhcc-CChHHHHHHHH
Q 013991 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY-GRKPVIIMGTA 120 (432)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~ 120 (432)
.++...+..++...........+|.+.++.|.+..+ .+.+.+...++..+++++.|++.||+ +||+.+.++.+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~------~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~ 271 (355)
T TIGR00896 198 LAWQVTVFFGLQSGLYYSLIGWLPAILISHGASAAT------AGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAV 271 (355)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHH
Confidence 333333333344444445556778787888998888 99999999999999999999999999 56777777877
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-Hhhhhhhcc-cchhhhhhhhHHHHHHHHHHHHHHHHhhhccc
Q 013991 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (432)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (432)
+.+++.+...+.++..... .-++.|++.+...+. .+.+.+..+ +++++...++.+....+|..++|.+.|.+.+.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~-~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~ 348 (355)
T TIGR00896 272 LQLVGLCGLLFAPMHGLWA-WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDI 348 (355)
T ss_pred HHHHHHHHHHHhhhhHHHH-HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777666654433222 346778888887775 666665554 56778899998888889999999999999983
No 176
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.23 E-value=2.5e-09 Score=104.11 Aligned_cols=153 Identities=12% Similarity=0.141 Sum_probs=112.4
Q ss_pred HHHHHHhcCCccccchhhhhhHHHH-HHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHH---hhh-hhHHHHH
Q 013991 65 YFMIKDFQIAKREEDIGSYAGYVGS-SFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF---GLS-VNFWMAV 139 (432)
Q Consensus 65 ~~~~~~~~~s~~~~~~~~~~~~~~s-~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~l~ 139 (432)
|++.+++|.+..+ .++... ...++..++.++.|+++||+|+|+.+.++.++.++..+++ +.. ++.+.+.
T Consensus 247 ~~l~~~~G~s~~~------~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~ 320 (491)
T PRK11010 247 TFLIRGVGFDAGE------VGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMG 320 (491)
T ss_pred HHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHH
Confidence 4556778999998 999874 5568999999999999999999998877666555544332 222 3444445
Q ss_pred HHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccchHH
Q 013991 140 LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLP 218 (432)
Q Consensus 140 ~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~ 218 (432)
+.-++..++.|...+. .++..+..+++.+++..++.+...++|..+++.+.|.+.+ ..+|...
T Consensus 321 ~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~----------------~~G~~~~ 384 (491)
T PRK11010 321 AAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVE----------------AHGWPTF 384 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HhChHHH
Confidence 4555655555544443 8888899999999999999999999999999899999998 3445555
Q ss_pred HHHHHHHHHHHHHHHhhcccc
Q 013991 219 CLCISLFAFGVTIAAFWLPET 239 (432)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~e~ 239 (432)
+.+.++++++.++....++++
T Consensus 385 f~~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 385 YLFSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 577777777766665555554
No 177
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.23 E-value=1.3e-10 Score=105.15 Aligned_cols=159 Identities=13% Similarity=0.139 Sum_probs=124.8
Q ss_pred CchhHHHHHHHHHHhhccccchhhhHH-HHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhcc--CChHHH
Q 013991 39 PITELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRY--GRKPVI 115 (432)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~--Grr~~l 115 (432)
+.+.++.++++.++.++.+..+.-..| ++.|..|.|..+ .++..+.+-++...+.+++|+++||+ |||.++
T Consensus 250 ~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~------a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~ 323 (448)
T COG2271 250 KNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVK------ANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPM 323 (448)
T ss_pred cChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHH------HHHHHHHHHHHhhHHHHHHHHHHHHhcccccchH
Confidence 445677888899999999999999998 556778899988 99999999999999999999999995 666554
Q ss_pred -HHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHhhh-ccchhhHHhhhhhhcccchhhhhhhhHHHHHHH-HHHHHHHHH
Q 013991 116 -IMGTASVVIFNTLFGLSV--NFWMAVLTRFLLGSL-NGLLGPIKAYACEIFREEHQALGLSTVSTAWGI-GLIIGPALG 190 (432)
Q Consensus 116 -~~~~~~~~~~~~~~~~~~--~~~~l~~~r~~~G~~-~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~ 190 (432)
++.+++..++.+..-+++ |++...++-++.|+. .|....+.....|..|++--|.+.|..+.+..+ |...+....
T Consensus 324 ~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~ 403 (448)
T COG2271 324 ALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPL 403 (448)
T ss_pred HHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcc
Confidence 444555555555555555 457777777888885 333333466778999999999999999988888 888998888
Q ss_pred hhhcccCCcCCCcccccccc
Q 013991 191 GFLAQPAEKYPNLFSSESLF 210 (432)
Q Consensus 191 ~~l~~~~~~~~~~~gw~~~~ 210 (432)
+++.+ .+||.+.|
T Consensus 404 g~i~d-------~~gW~g~F 416 (448)
T COG2271 404 GYIAD-------TWGWDGGF 416 (448)
T ss_pred eeeEe-------cCCCcchH
Confidence 88888 46666655
No 178
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.22 E-value=6.2e-10 Score=105.37 Aligned_cols=125 Identities=11% Similarity=0.004 Sum_probs=98.7
Q ss_pred HHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 013991 64 LYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRF 143 (432)
Q Consensus 64 ~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 143 (432)
.|.+.+++|.+..+ .+.+...+.++..++.++.|++.||.+++..+....+......++....++.+.+.+..+
T Consensus 240 ~p~~~~~~g~s~~~------~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 313 (394)
T PRK10213 240 RPVYMNLAGFGVDG------LTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAI 313 (394)
T ss_pred HHHHHHhcCCChhH------HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 36777888999888 999999999999999999999999965443344333334444455556667788888888
Q ss_pred HHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 144 LLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 144 ~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
+.|++.+...+. .+++.+..| +++++..+......++|..+||.++|.+.+
T Consensus 314 l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~ 365 (394)
T PRK10213 314 IWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALD 365 (394)
T ss_pred HHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999988877776 778888876 556777788888889999999999999998
No 179
>PRK10054 putative transporter; Provisional
Probab=99.22 E-value=1.4e-10 Score=109.91 Aligned_cols=111 Identities=16% Similarity=0.033 Sum_probs=94.7
Q ss_pred hhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHhhhccchhhH-Hhhhhh
Q 013991 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS-VNFWMAVLTRFLLGSLNGLLGPI-KAYACE 161 (432)
Q Consensus 84 ~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~ 161 (432)
.++..+...+......++.|++.||+++|+.+..+.++..++.....++ ++.+.+.+..++.|++.+...|. .+++.+
T Consensus 246 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~ 325 (395)
T PRK10054 246 VAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDH 325 (395)
T ss_pred HHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 7788888888778888899999999999999999988888888777664 56777777888999988877776 889999
Q ss_pred hcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 162 IFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 162 ~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
..|++.|++..+..+ ...+|..+||.++|.+.+
T Consensus 326 ~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~ 358 (395)
T PRK10054 326 IAPPGMKASYFSAQS-LGWLGAAINPLVSGVILT 358 (395)
T ss_pred hCCcccceehHhHHH-HHHHHHHHHHHHHHHHHH
Confidence 999999999988655 555899999999999998
No 180
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.21 E-value=1.9e-10 Score=110.76 Aligned_cols=176 Identities=15% Similarity=0.225 Sum_probs=148.5
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccC--ChHHHHHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG--RKPVIIMG 118 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~G--rr~~l~~~ 118 (432)
+.++.+.+...+..++.......+|.+.++.+.++.+ .+.+.++..+...++.+..|+++|+.. ++.+..++
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~------aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ 371 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSND------AAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLT 371 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhh------hHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHH
Confidence 4455667777778888888888889999999999999 999999999999999999999999988 45667888
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccC
Q 013991 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (432)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 197 (432)
+++.+++.+.+.++++++.++..-++.|++.|.+... ...+.|..+.++-..+.|+.....+++..+||+++|.+.+.+
T Consensus 372 ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~t 451 (509)
T KOG2504|consen 372 LLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDIT 451 (509)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeecc
Confidence 8888999999999999999999999999999998887 668999999999999999999999999999999999998854
Q ss_pred CcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcc
Q 013991 198 EKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLP 237 (432)
Q Consensus 198 ~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (432)
++ |...++.+++..++....++..+
T Consensus 452 g~---------------Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 452 GN---------------YDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred CC---------------eeeehhhcChHHHHHHHHHHHhH
Confidence 43 33334556655555555555555
No 181
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.19 E-value=7.1e-10 Score=106.47 Aligned_cols=135 Identities=13% Similarity=0.073 Sum_probs=87.7
Q ss_pred hccccchhhhHHHHH-HHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHh--
Q 013991 54 ALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG-- 130 (432)
Q Consensus 54 ~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~-- 130 (432)
..........+|.+. +++|.+..+ .+...+...++..+++++.|+++||+|||+.+.++.++..+......
T Consensus 256 ~~~~~~~~~~lp~~l~~~~g~s~~~------~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~ 329 (432)
T PRK10406 256 SLCFYTFTTYMQKYLVNTAGMHANV------ASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSA 329 (432)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHH
Confidence 333444556677554 568888877 88888888888889999999999999999988776655443332221
Q ss_pred h--hhhHHHHHHHHHHHhhhccchhh-HHhhhhhhcccchhhhhhhhHHHHHHH-HHHHHHHHHhhhc
Q 013991 131 L--SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGI-GLIIGPALGGFLA 194 (432)
Q Consensus 131 ~--~~~~~~l~~~r~~~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~ 194 (432)
. .++....+..-.+.+.+.+...+ ...+++|.+|++.|+.++|+.+...++ .....|.+.+.+.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~ 397 (432)
T PRK10406 330 LQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLK 397 (432)
T ss_pred HHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHH
Confidence 1 12222222211222223333333 377889999999999999998765443 3445777777553
No 182
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.17 E-value=5.3e-10 Score=101.27 Aligned_cols=177 Identities=14% Similarity=0.159 Sum_probs=135.5
Q ss_pred hHHHHHHHHHHhhccccchhhhHHHHH-HHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHH
Q 013991 42 ELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (432)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 120 (432)
.+....++.++..-+.+.+......+. .++|++..+ ..++.....+..+++++++|++.||+|.|+++.++.+
T Consensus 253 ~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~------lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lv 326 (438)
T COG2270 253 NLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTE------LLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLV 326 (438)
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHH
Confidence 344444444444444444444444454 599999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCc
Q 013991 121 SVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (432)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 199 (432)
+..+.++...+...-..+.+.-.+.|...|..+.. .++..+..|+++-++.+|+++.....+..+||.+-+.+.+.+++
T Consensus 327 i~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~ 406 (438)
T COG2270 327 ILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGS 406 (438)
T ss_pred HHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcc
Confidence 99888877766665556666677889988887775 99999999999999999999999999999999999999985433
Q ss_pred CCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccc
Q 013991 200 YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPET 239 (432)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 239 (432)
-|..+....++..+.++.+..+|+.
T Consensus 407 ---------------~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 407 ---------------SRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred ---------------hhhHHHHHHHHHHhhHhhEEeecCC
Confidence 2333344444444555555666654
No 183
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.17 E-value=7.3e-10 Score=104.06 Aligned_cols=183 Identities=16% Similarity=0.280 Sum_probs=136.2
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHHHHHhc-CCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQ-IAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (432)
+++....+..++.......+....+.+.++.| .+... .+.+.+...++=++.-...+++..|+|.|+++.++.
T Consensus 207 ~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~------~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~ 280 (400)
T PF03825_consen 207 PRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGST------IGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLAL 280 (400)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhH------HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 44555555666677777777778888888888 56666 787777878888888889999999999999999999
Q ss_pred HHHHHHHHHHhhh-hhHHHHH----HHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHH-HHHHHHHHHHHHHhh
Q 013991 120 ASVVIFNTLFGLS-VNFWMAV----LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVST-AWGIGLIIGPALGGF 192 (432)
Q Consensus 120 ~~~~~~~~~~~~~-~~~~~l~----~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~ 192 (432)
+..++=..+++.. ++.+... +...+.|+.-+...++ ..++.+..|++.|+++.++++. ..++|..+|..++|+
T Consensus 281 ~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~ 360 (400)
T PF03825_consen 281 VAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGW 360 (400)
T ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 9999988888887 4444433 3345689988887775 9999999999999999999865 568999999999999
Q ss_pred hcccCCcCCCcccccccccCccchHHHHHHHHHHHHHH-HHHhhcccc
Q 013991 193 LAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVT-IAAFWLPET 239 (432)
Q Consensus 193 l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~ 239 (432)
+.+ .+|-+..+ .|...+.+.+++.++.. +..++.||+
T Consensus 361 l~~-------~~g~~~~~---~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 361 LYD-------AFGARGMF---DWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHH-------Hhcchhhh---hHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 998 55544443 23334445555444433 333444543
No 184
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.15 E-value=5.1e-10 Score=106.22 Aligned_cols=129 Identities=12% Similarity=0.059 Sum_probs=104.7
Q ss_pred hhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhh-ccCChHHHHHHHHHHHHHHHHHhhhhhHHHHH
Q 013991 61 FPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD-RYGRKPVIIMGTASVVIFNTLFGLSVNFWMAV 139 (432)
Q Consensus 61 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~d-r~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~ 139 (432)
....|.+.++.+.++.+ .+++.+...++......+.+++.| |++.|+.+..+.++.+++.++.+.+++++.+.
T Consensus 228 ~~~~p~~~~~~~~~~~~------~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 301 (400)
T PRK11646 228 MLMLPIMVNDIAGSPSA------VKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLF 301 (400)
T ss_pred HHhhhhhHHhhcCCchH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 34567777776656666 888888877777666666677665 46667777888888888888888888888777
Q ss_pred HHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 140 LTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 140 ~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
+..++.|++.+...|. .+++.|..|+++|++.+++.+....+|..+||.++|++.+
T Consensus 302 ~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~ 358 (400)
T PRK11646 302 TLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFD 358 (400)
T ss_pred HHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHH
Confidence 7778888887777665 8899999999999999999999999999999999999998
No 185
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.14 E-value=1.3e-09 Score=102.81 Aligned_cols=123 Identities=14% Similarity=0.126 Sum_probs=91.6
Q ss_pred HHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhh-hhhHHHHHHHHH
Q 013991 65 YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL-SVNFWMAVLTRF 143 (432)
Q Consensus 65 ~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~-~~~~~~l~~~r~ 143 (432)
|++.+.+|.++.+ .+++.+...++..++.++.|++.||+|+|+.+..+..+..++.++... .++.+...+..+
T Consensus 224 ~~~~~~~g~s~~~------~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 297 (382)
T PRK10091 224 PYMMFISGFSETS------MTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAF 297 (382)
T ss_pred HHHHHhcCCCHHH------HHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 4556668999888 999999999999999999999999999999999888888777765543 445555556666
Q ss_pred HHhhhccch-hhHH-hhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 144 LLGSLNGLL-GPIK-AYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 144 ~~G~~~g~~-~~~~-~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
+.+++.... .+.. ....+..+++.++... .+....+|..+||.++|++.+
T Consensus 298 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l~~ 349 (382)
T PRK10091 298 ICCAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCGGMMLT 349 (382)
T ss_pred HHHHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHhHHHHH
Confidence 666653333 3333 3444544555555543 466788999999999999987
No 186
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.12 E-value=1.5e-09 Score=98.91 Aligned_cols=146 Identities=16% Similarity=0.112 Sum_probs=107.5
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHHHHH---hcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFMIKD---FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~ 117 (432)
+.+....+..++............+.+.++ +|.++.+ .+...+.+..+..++.+..+++.||+|+|+++.+
T Consensus 140 ~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~------a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~ 213 (310)
T TIGR01272 140 THLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQ------AAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAF 213 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 344444444554444455556666666543 5888888 9999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
+.++..++.++....++...+ .+-++.|++.+...|. .+...+..|++ .+++.++. ....+|..++|.+.|.+.+
T Consensus 214 ~~~l~~~~~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad 289 (310)
T TIGR01272 214 NAFLAVLLSIGAALTHGYVAM-WFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLAD 289 (310)
T ss_pred HHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHH
Confidence 888888777666555443332 3445778888887776 77887777753 45566665 5666899999999999998
No 187
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.11 E-value=8.9e-10 Score=104.76 Aligned_cols=149 Identities=14% Similarity=0.157 Sum_probs=100.2
Q ss_pred HHHHHHhcCCccccchhhhhhHHHHHHh-HHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHH---hhh-hhHHHHH
Q 013991 65 YFMIKDFQIAKREEDIGSYAGYVGSSFM-FGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLF---GLS-VNFWMAV 139 (432)
Q Consensus 65 ~~~~~~~~~s~~~~~~~~~~~~~~s~~~-~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~l~ 139 (432)
+.+.+++|.++++ .+++.+... ++..++.++.|++.||+|||+.+.++.++..+..+.. +.. ++.+.++
T Consensus 234 ~~l~~~~G~~~~~------~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~ 307 (402)
T PRK11902 234 TFLIRGAGFSAGE------VGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMA 307 (402)
T ss_pred HHHHHhcCCCHHH------HHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHH
Confidence 4566778999888 898886654 5688999999999999999998887777666554433 333 3555555
Q ss_pred HHHH----HHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCcc
Q 013991 140 LTRF----LLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFP 214 (432)
Q Consensus 140 ~~r~----~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~ 214 (432)
+.-+ ..|++.+...+. ..++.+.+|.+++ ++.+...++|...++.++|.+.+ ..+
T Consensus 308 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~----------------~~G 367 (402)
T PRK11902 308 LAIGIENLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVE----------------AYG 367 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHH----------------HhC
Confidence 5443 344444444554 6777777776654 44555567777767778999998 445
Q ss_pred chHHHHHHHHHHHHHHHHHhhcccc
Q 013991 215 YFLPCLCISLFAFGVTIAAFWLPET 239 (432)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~e~ 239 (432)
|+..+...++++++.++.....+.+
T Consensus 368 ~~~~f~~~~~~~~~~~~~~~~~~~~ 392 (402)
T PRK11902 368 WPGFYLMTVVIALPGLALLWLMRGT 392 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 5555577777666655554444433
No 188
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.11 E-value=6.1e-09 Score=90.11 Aligned_cols=132 Identities=14% Similarity=0.197 Sum_probs=107.0
Q ss_pred cccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhh---
Q 013991 56 PISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS--- 132 (432)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--- 132 (432)
..+.+...-|.+.+.+|.|.+| ...+.++..+|..+ .++.|.+.||+|.+.++.+|.+...++..+...+
T Consensus 17 t~Y~Fs~yS~~Lk~~l~~sq~~------l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~ 89 (250)
T PF06813_consen 17 TTYTFSAYSPQLKSRLGYSQSQ------LNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSG 89 (250)
T ss_pred cccchhhhhHHHHHHhCCCHHH------HHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4556667778999999999999 99999999999876 5899999999999999999999999998877653
Q ss_pred ----hhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 133 ----VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 133 ----~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
.++|.+.+..++.|.+.+....+ .....+.+| ++||++.|+.-...++++.+-..+...+.+
T Consensus 90 ~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~ 156 (250)
T PF06813_consen 90 RIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFG 156 (250)
T ss_pred ccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcC
Confidence 36788887777777776665554 555567787 589999999999999988777666655554
No 189
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.10 E-value=2.9e-10 Score=106.28 Aligned_cols=132 Identities=15% Similarity=0.128 Sum_probs=102.5
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHh-HHHHHHHHhhhhhhhccCChHHHHHHHHH
Q 013991 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFM-FGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (432)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~-~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 121 (432)
++.+.+..++............|.+.+++|.+.++ .+.+.++.. ++..++.+++|++.||+|||+.+..+.++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~------~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~ 284 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEE------IALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIV 284 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 44344444444455555666777777779998888 888887665 57789999999999999999999888888
Q ss_pred HHHHHHHHhhh-----------hhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHH
Q 013991 122 VVIFNTLFGLS-----------VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWG 180 (432)
Q Consensus 122 ~~~~~~~~~~~-----------~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~ 180 (432)
..++..+..+. ++.+.+..+.++.+++.+...+. .+++.|.+|+++|++.+++.+...+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 285 QALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 87776655443 35577788888899998887776 9999999999999999999877654
No 190
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.10 E-value=4.1e-09 Score=90.01 Aligned_cols=147 Identities=18% Similarity=0.238 Sum_probs=109.8
Q ss_pred HHHHHHHHHHhhccccchhhhHH-HHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHH
Q 013991 43 LFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (432)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 121 (432)
++.+.+..++......-....-| .+++.+|.|..+ .+.+.+.......+.+++.|.++||+|++-..+.+..+
T Consensus 266 fw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~------a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~ 339 (459)
T KOG4686|consen 266 FWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVS------AGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACI 339 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhh------ccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHH
Confidence 44444444444333322223333 567899999998 88899988888899999999999999999776665444
Q ss_pred -HHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccC
Q 013991 122 -VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (432)
Q Consensus 122 -~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 197 (432)
..++-....+ +++.=+++..+.|+........ ...++.+.|+++-|++.|..+...++|..+-|+++|++.+..
T Consensus 340 ~tl~~H~~l~F--t~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~ 415 (459)
T KOG4686|consen 340 LTLLGHSGLFF--TFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGD 415 (459)
T ss_pred HHHHHhhhHHh--hhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCC
Confidence 3444333333 3344456667888887777775 889999999999999999999999999999999999999843
No 191
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.10 E-value=7.1e-10 Score=98.10 Aligned_cols=126 Identities=21% Similarity=0.291 Sum_probs=96.7
Q ss_pred hHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhH----HHHHHHHHHHhhhccchhhHHhhhhhhcccch
Q 013991 92 MFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNF----WMAVLTRFLLGSLNGLLGPIKAYACEIFREEH 167 (432)
Q Consensus 92 ~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~----~~l~~~r~~~G~~~g~~~~~~~~i~~~~~~~~ 167 (432)
.+.-.-|.++.+++.||+|||+.|..+.++++++.++...+.+- ..++.+|++. .|++.+++.|..|++|.+.
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafi---sg~fqvaYvYtPEVyPTav 467 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFI---SGAFQVAYVYTPEVYPTAV 467 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHH---hchheEEEEecCcccchhh
Confidence 34456788999999999999999999999999998887765432 3445566544 4556667999999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhccc
Q 013991 168 QALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPE 238 (432)
Q Consensus 168 r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 238 (432)
|+.+.|..+.+..+|+++.|.++ ...+ -+-..+..+...+.++..+...++|-
T Consensus 468 RatgvGtcSsmaRIggI~~p~iA-~~~e-----------------~s~sl~i~vy~~~~ilagIavcffPi 520 (528)
T KOG0253|consen 468 RATGVGTCSSMARIGGIFSPVIA-MRAE-----------------LSTSLPIFVYGALFILAGIAVCFFPI 520 (528)
T ss_pred hhcchhhhhhHHhhhhhhhhHHH-HHhc-----------------cceeehHHHHHHHHHHHHHHheeeee
Confidence 99999999999999999999999 3322 22334456666666666667777773
No 192
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.09 E-value=2.3e-09 Score=104.01 Aligned_cols=176 Identities=15% Similarity=0.131 Sum_probs=110.0
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHH-HHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHH----
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVI---- 115 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l---- 115 (432)
+.++...+..+............+|.+ .+++|.+..+ .+++.+...++..++.++.|+++||+++|+..
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~------~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~ 334 (465)
T TIGR00894 261 LPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKE------NGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTA 334 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHH------hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHH
Confidence 345555666666666666666777855 4568999888 99999999999999999999999998754221
Q ss_pred ----HHHHHHHHHHHHH--Hhh-hhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHH
Q 013991 116 ----IMGTASVVIFNTL--FGL-SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGP 187 (432)
Q Consensus 116 ----~~~~~~~~~~~~~--~~~-~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 187 (432)
..+......+..+ ... ..+....++.-.+.+.+.+...+. .....|..|+ .+|...++.+....+|..++|
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p 413 (465)
T TIGR00894 335 ARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIAS 413 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHH
Confidence 1111111111111 111 223333333434444444433333 4455566654 899999999999999999999
Q ss_pred HHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhc
Q 013991 188 ALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL 236 (432)
Q Consensus 188 ~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (432)
.+.+.+.+. .+ ...|...+.+.++..++..+.....
T Consensus 414 ~l~g~~~~~-------~~------~~~~~~~f~~~~~~~~i~~i~~~~~ 449 (465)
T TIGR00894 414 TLAGNILSQ-------DS------KNVWLIVFLIMAFVNILCVIFYLIF 449 (465)
T ss_pred HhhheeeCC-------CC------chHHHHHHHHHHHHHHHHHHHeeee
Confidence 999988761 11 1235666666666666554444433
No 193
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.08 E-value=6.5e-09 Score=94.92 Aligned_cols=147 Identities=22% Similarity=0.329 Sum_probs=108.6
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhc----cCChHHHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRKPVII 116 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr----~Grr~~l~ 116 (432)
+.++.+....+..-++...-..+.+++.+++|++..- .+.+--+..+...+.+|+.|..+|| |||||.++
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~------~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI 105 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQSLGVPHKW------SSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFI 105 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHcCCCccc------ccccccccccccceecccccccccccccccccccchH
Confidence 4555555555555666666667778888999999887 7777788888888999999999995 89877665
Q ss_pred H-HHHHHHHHHHHHhhhhhHH-----------------HHHHHHHHHhhhc-cchhhHHhhhhhhcccchhhh-hhhhHH
Q 013991 117 M-GTASVVIFNTLFGLSVNFW-----------------MAVLTRFLLGSLN-GLLGPIKAYACEIFREEHQAL-GLSTVS 176 (432)
Q Consensus 117 ~-~~~~~~~~~~~~~~~~~~~-----------------~l~~~r~~~G~~~-g~~~~~~~~i~~~~~~~~r~~-~~~~~~ 176 (432)
. +.....++.++.+++.++. .++++-.+.-++. -...|+.+++.|....+++.+ +++.+.
T Consensus 106 ~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~ 185 (498)
T KOG0637|consen 106 LAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFS 185 (498)
T ss_pred HHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHH
Confidence 4 4566677777777765442 2333333444443 345678999999998777777 999999
Q ss_pred HHHHHHHHHHHHHHhhh
Q 013991 177 TAWGIGLIIGPALGGFL 193 (432)
Q Consensus 177 ~~~~~g~~~g~~~~~~l 193 (432)
.+.++|..+|..+++++
T Consensus 186 ~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 186 FFMAVGNVLGYALGSYL 202 (498)
T ss_pred HHHHhcceeeeeccccc
Confidence 99999999998888743
No 194
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.08 E-value=1.2e-09 Score=98.89 Aligned_cols=146 Identities=18% Similarity=0.224 Sum_probs=113.9
Q ss_pred chhHHHHHHHHHHhhccccchhhhHH-HHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHH
Q 013991 40 ITELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (432)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~ 118 (432)
.++.+.+.+.++.+.-+.-.++..+| ++.++|+.++.+ .|...+.+.+...+..+..|+++||+|.+|++.+.
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~------Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~ 290 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVT------AGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAV 290 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhh------HHHHHHHHHHHHHHHHhccchhhhhccchhHHHHH
Confidence 45566666666666666666677777 667889999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhh-------hHH----HHHHHHHHHhhhccchhhHHhhhhhhcccchhhhhhhhHHHHHHHHHHHHH
Q 013991 119 TASVVIFNTLFGLSV-------NFW----MAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGP 187 (432)
Q Consensus 119 ~~~~~~~~~~~~~~~-------~~~----~l~~~r~~~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 187 (432)
...++++..+..... +.. .++...++.|+|.|. +..++..++|+ +-|.+.|+.+...++|..+-|
T Consensus 291 f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGs---vfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp 366 (417)
T COG2223 291 FVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGS---VFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLP 366 (417)
T ss_pred HHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcch---heeechHHHHh-hhhHHHHHHHHhccccccchh
Confidence 888888887776653 333 344455556666554 35566666654 678899999999999999999
Q ss_pred HHHhhhcc
Q 013991 188 ALGGFLAQ 195 (432)
Q Consensus 188 ~~~~~l~~ 195 (432)
..-+...+
T Consensus 367 ~~~g~~~~ 374 (417)
T COG2223 367 LAFGVSLD 374 (417)
T ss_pred HHHHHHHH
Confidence 88888887
No 195
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.07 E-value=4.5e-09 Score=100.76 Aligned_cols=151 Identities=18% Similarity=0.197 Sum_probs=126.1
Q ss_pred chhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHH
Q 013991 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (432)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (432)
.|.+..+....++............+++.++.--+++. .+.+..+..++..++.+++++++||+|+|+.+..+.
T Consensus 224 nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~------~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~ 297 (428)
T PF13347_consen 224 NRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGL------ISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGL 297 (428)
T ss_pred cchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchh------hHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhH
Confidence 35566667777777777777777777777664334455 788888999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhh--hHHHHHHHHHHHhhhccchhhH-Hhhhhhhccc-------chhhhhhhhHHHHHHHHHHHHHHH
Q 013991 120 ASVVIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE-------EHQALGLSTVSTAWGIGLIIGPAL 189 (432)
Q Consensus 120 ~~~~~~~~~~~~~~--~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~ 189 (432)
++.+++.++..+.+ +.+.+++.-++.|++.+...+. .++++|..+. ++.|...+..+....+|..+++.+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i 377 (428)
T PF13347_consen 298 LLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAI 377 (428)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHH
Confidence 99999999888876 8999999999999998887776 8899998873 345888999999999999999999
Q ss_pred Hhhhccc
Q 013991 190 GGFLAQP 196 (432)
Q Consensus 190 ~~~l~~~ 196 (432)
.+.+.+.
T Consensus 378 ~g~~l~~ 384 (428)
T PF13347_consen 378 VGLLLAL 384 (428)
T ss_pred HHHHHHH
Confidence 9988873
No 196
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.07 E-value=1.3e-09 Score=106.37 Aligned_cols=147 Identities=16% Similarity=0.112 Sum_probs=116.8
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHH-HHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHH
Q 013991 43 LFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (432)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 121 (432)
+....+..++..+........+|.+. +.+|.+..+ .++......++..++.++.|++.||+|||+.+.++..+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~ 330 (485)
T TIGR00711 257 FTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQ------AGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLIL 330 (485)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHH
Confidence 33334444444444444455667555 457999888 99999999999999999999999999999999999988
Q ss_pred HHHHHHHHhh----hhhHHHHHHHHHHHhhhccchhh-HHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 122 VVIFNTLFGL----SVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 122 ~~~~~~~~~~----~~~~~~l~~~r~~~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
.+++..+..+ ..+.+.+....++.|++.+...+ ......+..|+++|+++.++.+....+|..+|+.+.+.+.+
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 331 YAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred HHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888877662 23566677778889998877654 47777788999999999999999999999999999988875
No 197
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.05 E-value=3.2e-09 Score=114.72 Aligned_cols=131 Identities=14% Similarity=0.114 Sum_probs=113.1
Q ss_pred chhhhHH-HHHHHhcCCcc-ccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhHH
Q 013991 59 SLFPFLY-FMIKDFQIAKR-EEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFW 136 (432)
Q Consensus 59 ~~~~~~~-~~~~~~~~s~~-~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~ 136 (432)
.....+| ++.+++|.+.. + .+++.+...++.+++.++.|+++||+++|+++.++.++.+++.++..+..+.+
T Consensus 250 ~~~~~~~~~~~~~~g~s~~~~------~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (1146)
T PRK08633 250 LAQANFPAYAKEVLGLDNTFQ------VQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLA 323 (1146)
T ss_pred HHHHhhHHHHHHHhCCCcHHH------HHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHH
Confidence 3344455 44567899888 7 89999999999999999999999999999999999888888888888888888
Q ss_pred HHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 137 MAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 137 ~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
.+++..++.|++.+...+. .+++.+..|+++|++++++.+....+|.++++.+++.+..
T Consensus 324 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~ 383 (1146)
T PRK08633 324 SVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG 383 (1146)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888889999988877665 8999999999999999999999999999888888877653
No 198
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.04 E-value=3.4e-09 Score=101.01 Aligned_cols=147 Identities=12% Similarity=0.132 Sum_probs=98.4
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHHHHh--cCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHH-HHHHH
Q 013991 43 LFSIWIIVLCTALPISSLFPFLYFMIKDF--QIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPV-IIMGT 119 (432)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~-l~~~~ 119 (432)
++...+..++.......+...+|.+.+++ +.+..+ .+...+...++..++.++.|+++||++||+. +....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~------~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~ 317 (412)
T TIGR02332 244 IMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIM------IGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPY 317 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH------hHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHH
Confidence 33444445555555666777888888775 456666 8889999999999999999999999997774 34444
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 120 ASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
++..++..+....++....+.+-.+.+++.....+. .....|.+|+++|++++|+.+....+|.+++|.+.+.+.+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~ 394 (412)
T TIGR02332 318 LFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKD 394 (412)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccc
Confidence 344433322222222222111112222222222233 4555778999999999999999999999999999999988
No 199
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.04 E-value=3.9e-09 Score=100.10 Aligned_cols=120 Identities=12% Similarity=0.054 Sum_probs=84.9
Q ss_pred HHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 013991 66 FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLL 145 (432)
Q Consensus 66 ~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~ 145 (432)
.+.+++|.++.+ .+.+.+...++..++.++.|++.||+|||+.+.++..+..++.++..+.++.+..+..-.+.
T Consensus 229 ~~~~~~g~~~~~------~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 302 (392)
T PRK10473 229 LLMEQMGFSRGE------YAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLI 302 (392)
T ss_pred HHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345678988888 89999999999999999999999999999999999998888888877766555444433343
Q ss_pred hhhccchhhHHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 146 GSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 146 G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
+.+.+...+ .....+..|.++|+ +..+...+++..+|+.+++++.+
T Consensus 303 ~~g~~~~~~-~~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~ 348 (392)
T PRK10473 303 CAGFSVGFG-VAMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAA 348 (392)
T ss_pred HHHHHHHhH-HHHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHH
Confidence 333322222 22334444555553 44455566777788888888876
No 200
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.04 E-value=4.5e-09 Score=97.21 Aligned_cols=142 Identities=25% Similarity=0.278 Sum_probs=117.3
Q ss_pred hhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-Hhhhhhh
Q 013991 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEI 162 (432)
Q Consensus 84 ~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~ 162 (432)
.|.+.+...+.-++.-.+..++.+|+|.|+.++++.++.++=.++++++++.+.+.+.+.+.|+-.+..... ..|+++.
T Consensus 261 ~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~ 340 (412)
T PF01306_consen 261 YGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAH 340 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999999987777665 9999999
Q ss_pred cccchhhhhhhhH-HHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHH-HHHHHhhccccc
Q 013991 163 FREEHQALGLSTV-STAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFG-VTIAAFWLPETL 240 (432)
Q Consensus 163 ~~~~~r~~~~~~~-~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~ 240 (432)
+|+|..++...+. +.+.++|..+.+.++|.+.| +.|++..+.+.+.+.++ .++..+.+++++
T Consensus 341 fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd----------------~~G~~~tylimg~iv~~~~li~~f~l~~~~ 404 (412)
T PF01306_consen 341 FDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYD----------------RIGFQHTYLIMGLIVLPFTLISAFTLKKDK 404 (412)
T ss_dssp S-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHHS--SS
T ss_pred CCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHh----------------hcCcHHHHHHHHHHHHHHHHHheeeecCCC
Confidence 9999888888775 78899999999999999999 56666666777666655 444556665544
Q ss_pred C
Q 013991 241 H 241 (432)
Q Consensus 241 ~ 241 (432)
+
T Consensus 405 ~ 405 (412)
T PF01306_consen 405 K 405 (412)
T ss_dssp S
T ss_pred c
Confidence 3
No 201
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.03 E-value=3.2e-09 Score=103.67 Aligned_cols=143 Identities=17% Similarity=0.138 Sum_probs=113.9
Q ss_pred HHHHHHhhccccchhhhHHH-HHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHH
Q 013991 47 WIIVLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (432)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 125 (432)
.+..+.............|. +++.+|.++.+ .|+......++..++.++.|++.||+|+|+.+..+.++..++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~------ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~ 338 (495)
T PRK14995 265 VVMAMTAMITLVGFELLMAQELQFVHGLSPLE------AGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALS 338 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHH
Confidence 33344443333344455564 45568999998 999999999999999999999999999999999888888777
Q ss_pred HHHHhh---hhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 126 NTLFGL---SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 126 ~~~~~~---~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
.++... .++.+......++.|++.|...+. ...+.+..|+++++.+.++.+....+|..+|+.+.+.+.+
T Consensus 339 ~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 339 FYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 765543 245566677788899998877664 7788888999999999999999999999999999988765
No 202
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.03 E-value=9e-10 Score=102.60 Aligned_cols=135 Identities=21% Similarity=0.254 Sum_probs=109.9
Q ss_pred HHHHHHhhccccchhhhHHHH-HHHhcCC-ccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHH
Q 013991 47 WIIVLCTALPISSLFPFLYFM-IKDFQIA-KREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVI 124 (432)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~s-~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 124 (432)
....+.............|.+ .+++|.+ ..+ .+...+...+...++.++.|++.||+|+|+...+......+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 285 (352)
T PF07690_consen 212 LIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQ------AGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLIL 285 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHH------HHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHhhcccchhhhhccCCCHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 333444444444567777776 7889999 667 89999999999999999999999999998888888777777
Q ss_pred HHHHHhhhh---hHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHH
Q 013991 125 FNTLFGLSV---NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGP 187 (432)
Q Consensus 125 ~~~~~~~~~---~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 187 (432)
..+...... +....++.-++.|++.+...+. .+++.|..|+++|+++.++.+...++|..+||
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 286 GALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 777665543 4466777778899988877776 99999999999999999999999999999987
No 203
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.02 E-value=5.1e-09 Score=98.93 Aligned_cols=123 Identities=19% Similarity=0.251 Sum_probs=92.7
Q ss_pred hhhHHHH-HHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhh-----hh
Q 013991 61 FPFLYFM-IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS-----VN 134 (432)
Q Consensus 61 ~~~~~~~-~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~ 134 (432)
....|.+ .+++|.++.+ .+++.+...++..++.++.|++.||+|||+.+..+..+..++.+++... ++
T Consensus 226 ~~~~~~~~~~~~g~~~~~------~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (385)
T TIGR00710 226 FSGAPFVYIDIMGVSPSV------FGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGS 299 (385)
T ss_pred HHcChHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 3344544 4578988888 9999999999999999999999999999999988888777777666543 23
Q ss_pred HHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHH-HHHHHHHHHH
Q 013991 135 FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWG-IGLIIGPALG 190 (432)
Q Consensus 135 ~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~-~g~~~g~~~~ 190 (432)
...+++..++.|++.+...+. .....|..| ++|+++.++.+.... .|.+.+|.++
T Consensus 300 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 300 WAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555667788877776665 777788776 679999999876654 4566666555
No 204
>PRK09848 glucuronide transporter; Provisional
Probab=99.01 E-value=8.4e-10 Score=106.51 Aligned_cols=149 Identities=16% Similarity=0.142 Sum_probs=107.9
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHHHH-HhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (432)
+.+....+..++............|++.+ .+|.+... .++......++..++.++++++.||+|+|+++.++.
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~ 301 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLF------TVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGA 301 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 34444444444444444444444554443 45654433 444444446777889999999999999999999999
Q ss_pred HHHHHHHHHHhhhh--hHHHHHHHHHHHhhhccchhhH-Hhhhhhhcccc-------hhhhhhhhHHHHHHHHHHHHHHH
Q 013991 120 ASVVIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE-------HQALGLSTVSTAWGIGLIIGPAL 189 (432)
Q Consensus 120 ~~~~~~~~~~~~~~--~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~-------~r~~~~~~~~~~~~~g~~~g~~~ 189 (432)
++..++.++..+.+ +.+.+++..++.|+|.+...+. .++.+|..|.+ ++|...+..+....+|..+|+.+
T Consensus 302 ~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i 381 (448)
T PRK09848 302 LLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSI 381 (448)
T ss_pred HHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHH
Confidence 88888877776643 6677777778889988877775 88888888754 35889999999999999999999
Q ss_pred Hhhhcc
Q 013991 190 GGFLAQ 195 (432)
Q Consensus 190 ~~~l~~ 195 (432)
.+.+.+
T Consensus 382 ~g~~l~ 387 (448)
T PRK09848 382 PAFILG 387 (448)
T ss_pred HHHHHH
Confidence 998876
No 205
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.97 E-value=3.5e-08 Score=93.41 Aligned_cols=122 Identities=13% Similarity=0.095 Sum_probs=100.1
Q ss_pred HHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 013991 66 FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLL 145 (432)
Q Consensus 66 ~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~ 145 (432)
...+.+|.++.+ .|++.+...++..++++..+++.||+++|+++..+.. .++..++.++.++++...+..++.
T Consensus 231 ~~~~~lg~s~~~------~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~ 303 (393)
T PRK11195 231 WAPVALGITLNQ------PAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQHSLLPAYPLLILI 303 (393)
T ss_pred HHHHHcCCChhH------HHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHH
Confidence 445668999988 9999999999999999999999999999988887753 444455556677777777777889
Q ss_pred hhhccchhh-HHhhhhhhcccch-hhhhhhhHHHHHHHHHHHHHHHHhhhc
Q 013991 146 GSLNGLLGP-IKAYACEIFREEH-QALGLSTVSTAWGIGLIIGPALGGFLA 194 (432)
Q Consensus 146 G~~~g~~~~-~~~~i~~~~~~~~-r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (432)
|++.+...+ ..+.+.+..|++. +|++.++.+....+|..++..+.+.+.
T Consensus 304 G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~ 354 (393)
T PRK11195 304 GALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLV 354 (393)
T ss_pred HHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 998877665 4777888766654 799999999999999999999998764
No 206
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.96 E-value=7.6e-07 Score=88.54 Aligned_cols=158 Identities=15% Similarity=0.149 Sum_probs=113.3
Q ss_pred hhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhc-cCChHHHHHHHHHHHHHHHHHhhhhh-----
Q 013991 61 FPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMGTASVVIFNTLFGLSVN----- 134 (432)
Q Consensus 61 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~----- 134 (432)
.....++.+.+|.+.++ ...+...+....-+..++.|.++|+ +||++.+.++.++..++.++.+++..
T Consensus 8 aiLvlYl~~~lg~~~~~------A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~ 81 (654)
T TIGR00926 8 TILVLYFLNFLGFSEST------STVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGH 81 (654)
T ss_pred HHHHHHHHHHcCCcHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCccccc
Confidence 34445667778888887 7777777777778889999999995 89999999999999999888776421
Q ss_pred ---HHHHHHHHHHHhhhccchhhH-Hhhhhhhcccc---hhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCccccc
Q 013991 135 ---FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE---HQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSE 207 (432)
Q Consensus 135 ---~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~---~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~ 207 (432)
....+++-.+..+|.|..-++ .+...|.++++ +|.+.+.++..+.++|+.+++.+.+++.+..+.+..
T Consensus 82 ~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~----- 156 (654)
T TIGR00926 82 PLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGC----- 156 (654)
T ss_pred chHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-----
Confidence 123445556666777777675 99999998754 467788888999999999999999988741110000
Q ss_pred ccccCccchHHHHHHHHHHHHHHHHH
Q 013991 208 SLFGKFPYFLPCLCISLFAFGVTIAA 233 (432)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (432)
..+|...+.+.++..++.++..
T Consensus 157 ----~~~~~~aF~i~~i~m~ia~lvf 178 (654)
T TIGR00926 157 ----QDCYPLAFGVPAILMILALIVF 178 (654)
T ss_pred ----CcchHHHHHHHHHHHHHHHHHH
Confidence 2245555566666555544443
No 207
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.96 E-value=8.6e-09 Score=111.15 Aligned_cols=147 Identities=13% Similarity=0.075 Sum_probs=114.0
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHH-HHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHH
Q 013991 43 LFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (432)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 121 (432)
++...+..+...+....+...+|.+. +.+|.+..+ .|++.+.+.++.+++.++.|+++||.++++.+..+.++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~------~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~ 300 (1140)
T PRK06814 227 IWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENV------ATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALL 300 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHH------HHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHH
Confidence 33333333333333344445667555 457888888 99999999999999999999999988887776666666
Q ss_pred HHHHHHHHhhh--------------------hhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHH
Q 013991 122 VVIFNTLFGLS--------------------VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWG 180 (432)
Q Consensus 122 ~~~~~~~~~~~--------------------~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~ 180 (432)
.+++.+..++. ++.+.+++..++.|++.+...+. .+++.+.+|+++||+++|..+....
T Consensus 301 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~ 380 (1140)
T PRK06814 301 MGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNA 380 (1140)
T ss_pred HHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHH
Confidence 55555444432 66777888888999988887665 9999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcc
Q 013991 181 IGLIIGPALGGFLAQ 195 (432)
Q Consensus 181 ~g~~~g~~~~~~l~~ 195 (432)
+|..+++++.+.+.+
T Consensus 381 ~~~~ig~~~~g~l~~ 395 (1140)
T PRK06814 381 AFMVAGTIILALLQA 395 (1140)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998874
No 208
>PRK11043 putative transporter; Provisional
Probab=98.95 E-value=1.8e-08 Score=95.86 Aligned_cols=128 Identities=11% Similarity=0.027 Sum_probs=95.2
Q ss_pred hhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHh---h--hhhH
Q 013991 61 FPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG---L--SVNF 135 (432)
Q Consensus 61 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~---~--~~~~ 135 (432)
....|.+.+++|.+..+ .++......++..++.+..+++.||+|+|+.+....++..++.+... . .++.
T Consensus 223 ~~~~p~~~~~~g~s~~~------~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (401)
T PRK11043 223 LTGSPFILEQMGYSPAD------IGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSL 296 (401)
T ss_pred HHHhHHHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcH
Confidence 34567777888998888 88888888889999999999999999999877665555444433221 1 2345
Q ss_pred HHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 136 WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 136 ~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
+.+++...+.|++.+...+. .+...|..| ++|+++.++.+.....+...++.+.+.+.+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 297 VPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIS 356 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 55555666777777766665 666667665 689999999998888888888888888875
No 209
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.95 E-value=4.1e-07 Score=85.29 Aligned_cols=318 Identities=14% Similarity=0.043 Sum_probs=183.3
Q ss_pred hhHH-HHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-Hhhhhh
Q 013991 84 AGYV-GSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACE 161 (432)
Q Consensus 84 ~~~~-~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~ 161 (432)
.|+. .++......+++++.+.+.|+.|.|+.+.++..++....+.+.+.+ -+-++....+.|+|.+..+.. ..+++|
T Consensus 51 aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N-~y~~yfssallG~Gaallw~GqG~ylt~ 129 (461)
T KOG3098|consen 51 AGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPN-SYYLYFSSALLGFGAALLWTGQGGYLTS 129 (461)
T ss_pred ccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcc-hHHHHHHHHHhhhhHHheecccceehhh
Confidence 4444 6777788889999999999999999999999999998887776654 566788889999999998887 899999
Q ss_pred hcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCC-cccc-cccccCc--cchHHHHHHHHHHH--HHHHHHhh
Q 013991 162 IFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPN-LFSS-ESLFGKF--PYFLPCLCISLFAF--GVTIAAFW 235 (432)
Q Consensus 162 ~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~-~~gw-~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~ 235 (432)
..+++.+.+..++.-.....+.++|..+-..+......... ..+- +..++.. ....-++..+.... +.++...+
T Consensus 130 ~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~ 209 (461)
T KOG3098|consen 130 NSTRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDF 209 (461)
T ss_pred cCChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheee
Confidence 99999999999998888888888887766555542211000 0000 0000000 00011111111111 11111122
Q ss_pred cccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcC
Q 013991 236 LPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKL 315 (432)
Q Consensus 236 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (432)
+|.+......+..+ .. ..+..+...+++++++.+.+...++..++...-+...+|..+....
T Consensus 210 ~p~~~~~~~~~~~~-~~---------------~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~-- 271 (461)
T KOG3098|consen 210 LPSKDVVNCKSSSE-TS---------------FSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTR-- 271 (461)
T ss_pred cCccchhhhhhhcc-cc---------------HHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhh--
Confidence 22211111000000 00 0011123345677788777766666665555555555554333221
Q ss_pred CCcccc-cchhhHHHHHHHHHHHHHHHHhHHHHHHH---hChhHHHHHHHHHHHHHHHHhhHHHhhhh------------
Q 013991 316 GGLNYS-TQMVGEVLAITGFSLLVFQLSLYPFLERI---LGPIMVARIAGVLTIPLLTSYPYIAMLSG------------ 379 (432)
Q Consensus 316 ~~~g~s-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 379 (432)
..+.+ ....+......+++.++++. ..+.+.|| +|+++.+.++..+..+.+++.-.......
T Consensus 272 -~~~~n~~~~~ai~~~~~g~g~v~~g~-~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~ 349 (461)
T KOG3098|consen 272 -KLGSNTTYLIAIYSIGIGLGEVIGGL-DFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLF 349 (461)
T ss_pred -hccCcchhHHHHHHHHHhHHHHHHHH-HHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCccccccc
Confidence 11222 22234445555566666553 44555544 57777777777666655544432211110
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhH
Q 013991 380 FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCH 423 (432)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~ 423 (432)
.....+..+..++.|+.-.......+.++....| ++|..+...
T Consensus 350 ~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~-~~~~~~fsi 392 (461)
T KOG3098|consen 350 TPSYYLALIIGFLLGFGDACFNTQRYVIIALLYP-DDRAQAFSL 392 (461)
T ss_pred ccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhc-CchHHHHHH
Confidence 0123456667778888888888899999999884 444444333
No 210
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.95 E-value=1.9e-09 Score=104.70 Aligned_cols=150 Identities=11% Similarity=0.042 Sum_probs=106.8
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 120 (432)
+.+..+....++............+++.+....+.+. .+++.+...++.+++.+++++++||+|+|+.+.++.+
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~------~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~ 304 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADL------FPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASI 304 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 4444444444444444444444445555544334444 6677777778889999999999999999999998887
Q ss_pred HHHHHHHHHhh-----hhhHHHHHHHHHHHhhhccchhhH-Hhhhhhhcc-------cchhhhhhhhHHHHHHHHHHHHH
Q 013991 121 SVVIFNTLFGL-----SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-------EEHQALGLSTVSTAWGIGLIIGP 187 (432)
Q Consensus 121 ~~~~~~~~~~~-----~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~ 187 (432)
+..++.+.... ..+.+.+++.-++.|++.+...+. .++++|..+ +++.|..++......-+|..+++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~ 384 (473)
T PRK10429 305 FPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAA 384 (473)
T ss_pred HHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHH
Confidence 76666555432 345666777777888887777665 889999866 33345688889999999999999
Q ss_pred HHHhhhccc
Q 013991 188 ALGGFLAQP 196 (432)
Q Consensus 188 ~~~~~l~~~ 196 (432)
.+.|++.+.
T Consensus 385 ~i~g~~l~~ 393 (473)
T PRK10429 385 FFIGVVLGL 393 (473)
T ss_pred HHHHHHHHH
Confidence 999998873
No 211
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.94 E-value=3.8e-08 Score=92.06 Aligned_cols=144 Identities=12% Similarity=0.056 Sum_probs=95.3
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCC---hHHHHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR---KPVIIM 117 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Gr---r~~l~~ 117 (432)
+.++.+.+..++.......+...+|.+.++.|.+. + .+...+...+...++ .++++||.+| |+....
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~-~------~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~ 261 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALRPAGLED-I------AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIR 261 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCh-H------HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHH
Confidence 44555666666666666677778898888877664 3 455555555544444 4677777654 343332
Q ss_pred -HHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhh-HHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhc
Q 013991 118 -GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (432)
Q Consensus 118 -~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (432)
..++.++.....+.+.+....++.-.+.|++.....+ ..++.+|.+|++.|+++.|+.+....+|.+++|.+.+.+.
T Consensus 262 ~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~ 340 (368)
T TIGR00903 262 AAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFI 340 (368)
T ss_pred HHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHh
Confidence 3444444444444444444444444556665555545 4889999999999999999999999999999999988776
No 212
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.92 E-value=2.5e-08 Score=94.05 Aligned_cols=124 Identities=16% Similarity=0.170 Sum_probs=83.8
Q ss_pred hhhHH-HHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhh----hhhH
Q 013991 61 FPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL----SVNF 135 (432)
Q Consensus 61 ~~~~~-~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~----~~~~ 135 (432)
....| .+.+++|.++.+ .++..+...++..++.++.|++.||+|||+.+.++..+..+..+.... ..+.
T Consensus 214 ~~~~~~~~~~~~g~s~~~------~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (377)
T PRK11102 214 LTAGPFVYIELNGVSPQN------FGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGF 287 (377)
T ss_pred HHcCHHHHHHHhCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 33334 455668999888 999999999999999999999999999999998887665443332221 2244
Q ss_pred HHHHHHHHHHhhhccchhh-HHhhhhhhcccchhhhhhhhHHHH-HHHHHHHHHHHHh
Q 013991 136 WMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTA-WGIGLIIGPALGG 191 (432)
Q Consensus 136 ~~l~~~r~~~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~-~~~g~~~g~~~~~ 191 (432)
+.+.++-.+.+.+.+.... ...++.|..| ++|++..+..+.. ..+|..+++.+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 288 WALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4444444444444344343 3566777665 7899998887543 4566666666654
No 213
>PRK09669 putative symporter YagG; Provisional
Probab=98.91 E-value=6.2e-09 Score=100.35 Aligned_cols=113 Identities=19% Similarity=0.243 Sum_probs=88.2
Q ss_pred hhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhh--hhhHHHHHHHHHHHhhhccchhhH-Hhhhh
Q 013991 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL--SVNFWMAVLTRFLLGSLNGLLGPI-KAYAC 160 (432)
Q Consensus 84 ~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~--~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~ 160 (432)
.+.+.....++.+++.+++++++||+|+|+.+.++.++..+..+...+ .++.+.+++..++.|++.+...+. .++++
T Consensus 266 ~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~a 345 (444)
T PRK09669 266 ATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFS 345 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666677888889999999999999999998887766654433222 356777788888899988887776 88999
Q ss_pred hhccc-------chhhhhhhhHHHHHHHHHHHHHHHHhhhccc
Q 013991 161 EIFRE-------EHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (432)
Q Consensus 161 ~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (432)
|..+. +..|...+..+....+|..+|+.++|.+.+.
T Consensus 346 d~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~ 388 (444)
T PRK09669 346 DVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAW 388 (444)
T ss_pred hhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88862 2345677888889999999999999999873
No 214
>PRK10133 L-fucose transporter; Provisional
Probab=98.90 E-value=1.9e-08 Score=96.46 Aligned_cols=119 Identities=11% Similarity=0.006 Sum_probs=94.7
Q ss_pred HHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhh
Q 013991 68 IKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 147 (432)
Q Consensus 68 ~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~ 147 (432)
.+.+|.++.+ .++....+.++..++.++.|++.||+|||+++..+.++..++..+..+.++.+. +..-.+.|+
T Consensus 287 ~~~~g~s~~~------ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~gl 359 (438)
T PRK10133 287 EEIPGMTAGF------AANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVG-LIALTLCSA 359 (438)
T ss_pred hhcCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHHHHH
Confidence 3467999998 999999999999999999999999999999999888877777666655555322 445567899
Q ss_pred hccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 148 LNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 148 ~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
+.+...|. .+...|..|+ +.+.+.++... ..+|..++|.+.|.+.+
T Consensus 360 g~~~i~P~~~s~a~~~~~~-~~~~as~l~~~-~~~g~~~~~~i~G~l~~ 406 (438)
T PRK10133 360 FMSIQYPTIFSLGIKNLGQ-DTKYGSSFIVM-TIIGGGIVTPVMGFVSD 406 (438)
T ss_pred HHHHHHHHHHHHHHcccch-hhccchhHHhH-HhccchHHHHHHHHHHH
Confidence 88888885 8888888765 45677777764 44678888888888887
No 215
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.90 E-value=4.4e-08 Score=92.89 Aligned_cols=148 Identities=20% Similarity=0.143 Sum_probs=91.8
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 120 (432)
++.+.+.+..++.+.........+|++.++ ..+... ......+..+...+..|++|+++||+|+|+++.++.+
T Consensus 252 ~~~Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~~~------~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i 324 (462)
T PRK15034 252 LHLWLLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVN------ILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFI 324 (462)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHH------HHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHH
Confidence 344555555555555555556667766544 222222 2223344567788899999999999999999999888
Q ss_pred HHHHHHHHHhh-h-----hhHHHHHHHHHHHhhhccchhh-HHhhhhhhccc---------------------chhhhhh
Q 013991 121 SVVIFNTLFGL-S-----VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFRE---------------------EHQALGL 172 (432)
Q Consensus 121 ~~~~~~~~~~~-~-----~~~~~l~~~r~~~G~~~g~~~~-~~~~i~~~~~~---------------------~~r~~~~ 172 (432)
...++...... . .+++.+.+..+...++.|.-.. ...++.+++|+ ++-|.+.
T Consensus 325 ~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ 404 (462)
T PRK15034 325 FMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAAL 404 (462)
T ss_pred HHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHH
Confidence 77776643221 1 2455555444333333333322 35566666653 2557788
Q ss_pred hhHHHHHHHHHHHHHHHHhhhcc
Q 013991 173 STVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 173 ~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
|+.+....+|..+-|.+-+...+
T Consensus 405 G~v~a~G~~Ggf~~p~~~g~~~~ 427 (462)
T PRK15034 405 GFISAIGAVGGFFIPQAFGMSLN 427 (462)
T ss_pred HHHHHHHHcccchhhHHHHHHHH
Confidence 88888889988888877677665
No 216
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.85 E-value=1.2e-08 Score=98.51 Aligned_cols=122 Identities=7% Similarity=-0.037 Sum_probs=103.5
Q ss_pred HHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhh----------hhHHHH
Q 013991 69 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS----------VNFWMA 138 (432)
Q Consensus 69 ~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----------~~~~~l 138 (432)
+.+|.++.+ .|.+.....++.+++....+++.+|++.|+++.++.++.+++.+..... ++.+.+
T Consensus 281 ~~lG~s~~~------~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~ 354 (468)
T TIGR00788 281 QCLPGGPSF------SGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFV 354 (468)
T ss_pred ccCCCCcch------hhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeee
Confidence 568999999 9999999999999999999999999999999999999998887654311 233344
Q ss_pred HHHHHHHhhhccchhh-HHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhccc
Q 013991 139 VLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQP 196 (432)
Q Consensus 139 ~~~r~~~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 196 (432)
...-++.+++.+.... ...++.+..|+++++...++.+...++|..+++.+++.+.+.
T Consensus 355 ~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~ 413 (468)
T TIGR00788 355 LGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMET 413 (468)
T ss_pred eehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556777887666555 599999999999999999999999999999999999999983
No 217
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.82 E-value=2.1e-07 Score=84.63 Aligned_cols=142 Identities=30% Similarity=0.488 Sum_probs=117.0
Q ss_pred HHHHHhhccccchhhhHHHHHHHhcCCc--cccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHH
Q 013991 48 IIVLCTALPISSLFPFLYFMIKDFQIAK--REEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (432)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 125 (432)
...+....+.....+..+.+..+++.+. .. .++..+.+.++..++.++.|.++||+|||+.+..+.....++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 82 (338)
T COG0477 9 LAALLLGLDLGLLSPALPLLLSTLSLSSGRLL------YGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLG 82 (338)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHcCCCchhHH------HHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHH
Confidence 3344444666667777888888887766 35 899999999999999999999999999998888888766666
Q ss_pred HHHHhhhhh--HHHHHHHHHHHhhhccchhhH-Hhhhhhhccc-chhhhhhhhHHH-HHHHHHHHHHHHHhhhcc
Q 013991 126 NTLFGLSVN--FWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE-EHQALGLSTVST-AWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 126 ~~~~~~~~~--~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~-~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~ 195 (432)
.+..++..+ .+.+++.|+.+|++.+...+. .+++.|..|+ ++|+...+.... ...+|..++|.+++.+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T COG0477 83 TLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLG 157 (338)
T ss_pred HHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666665 889999999999988877776 9999999998 788999999888 688899999988888876
No 218
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.82 E-value=2.5e-06 Score=78.75 Aligned_cols=175 Identities=15% Similarity=0.143 Sum_probs=109.8
Q ss_pred HHHHHHHHhhccccchhhhHHHHHHHhcCCcccc--c----------------hhhhhhHHHHHHhHHHHHHHHhhhhhh
Q 013991 45 SIWIIVLCTALPISSLFPFLYFMIKDFQIAKREE--D----------------IGSYAGYVGSSFMFGRALTSVFWGLVA 106 (432)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~----------------~~~~~~~~~s~~~~~~~~~~~~~G~l~ 106 (432)
..|+..+++.+.+-++.....++.++...+..+. + .....+.+.-+-.+...+..+.+-++.
T Consensus 4 ~fw~~Gl~Nn~~yvv~lsaA~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~c~~~~t~~Vlladi~P~l~~Kl~aP~fi 83 (402)
T PF02487_consen 4 AFWLLGLCNNFLYVVMLSAAHDIVGEQKASPNSSHVDPDPPSTTLPSSSRRDCKSVSTGAVLLADILPSLLVKLIAPFFI 83 (402)
T ss_pred HHHHHHHhcchhHhhhHHhHHHHhhccccCCCCCCCCCCCCCCcCCCccCCCCCcccchHHHHHHHHHHHHHHHHhHhhh
Confidence 3455666666666666666666665321110000 0 011134455556667777778888899
Q ss_pred hccCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHH
Q 013991 107 DRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLII 185 (432)
Q Consensus 107 dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 185 (432)
+|+..+.=..+..++..++.++.+++++.+.-+++-++.+++.|..... ..+ +..+++ ..++-++.+.+.++++
T Consensus 84 ~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l-t~~y~~----~~l~~wssGTG~aGl~ 158 (402)
T PF02487_consen 84 HRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL-THFYGK----SSLSAWSSGTGGAGLV 158 (402)
T ss_pred hhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH-HHhcCc----cccccccCCcChhhHH
Confidence 9988665556667788889999999999988888888888887776665 444 445553 3577788888888888
Q ss_pred HHHHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHh-hcccc
Q 013991 186 GPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAF-WLPET 239 (432)
Q Consensus 186 g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~ 239 (432)
|+..-..+.+ . ..+.+...++...+.++.++..+ .+|++
T Consensus 159 Ga~~y~~lT~-~--------------g~s~~~tll~~~~lp~~~~~~~f~~L~~~ 198 (402)
T PF02487_consen 159 GALYYLGLTT-L--------------GLSPRTTLLIMLVLPAIFLLSYFFLLPSP 198 (402)
T ss_pred HHHHHHHHHH-h--------------CcCHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 8877655553 1 34455555665555544444433 44443
No 219
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.80 E-value=8.2e-06 Score=77.66 Aligned_cols=292 Identities=9% Similarity=0.120 Sum_probs=162.4
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCc-----cccchhhhhhHHHHHHhHHHHHH-HHhhhhhhhccCChHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAK-----REEDIGSYAGYVGSSFMFGRALT-SVFWGLVADRYGRKPV 114 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-----~~~~~~~~~~~~~s~~~~~~~~~-~~~~G~l~dr~Grr~~ 114 (432)
+.++...+..|+..+.++ .+-.+.+.+..+. +. ..++-+...+...+. .++.+++++|++|+++
T Consensus 7 ~k~~~~~l~fF~il~~Y~----iLR~lKD~lvv~~~~~gae~------i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~l 76 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYT----ILRDTKDTLVVTAKGSGAEI------IPFLKTWVVVPMAVIFMLIYTKLSNILSKEAL 76 (472)
T ss_pred HHHHHHHHHHHHHHHHHH----HHHhhhhheeecccCCchhh------HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHh
Confidence 445555555555444433 3345566665532 34 788888777776666 8999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhh----h---------------------------hHHHHHHHHHHHhhhccch-hhH-Hhhhhh
Q 013991 115 IIMGTASVVIFNTLFGLS----V---------------------------NFWMAVLTRFLLGSLNGLL-GPI-KAYACE 161 (432)
Q Consensus 115 l~~~~~~~~~~~~~~~~~----~---------------------------~~~~l~~~r~~~G~~~g~~-~~~-~~~i~~ 161 (432)
+-+....+.+...++++. + +.|...+..+...+-+... ... .++.+|
T Consensus 77 f~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fand 156 (472)
T TIGR00769 77 FYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQ 156 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888777777766666553 0 1233333334444433333 334 889999
Q ss_pred hcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccch----HHHHHHHHHHHHHHHHHhhcc
Q 013991 162 IFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYF----LPCLCISLFAFGVTIAAFWLP 237 (432)
Q Consensus 162 ~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 237 (432)
.+..+|-.|..++++.+.++|.++++.+..++.+...+.+.. ...|. ....+.++..++.+.+...+.
T Consensus 157 i~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~ 228 (472)
T TIGR00769 157 ITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPG--------VDGWHVSLKNLMVIVICSGLAIILLYWWVN 228 (472)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc--------cChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988887421111100 11221 122333333333334444443
Q ss_pred cccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCC
Q 013991 238 ETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGG 317 (432)
Q Consensus 238 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (432)
+.... +++.. +. ++ .+++++.+..-....+.++++|.++...+...+++..........-......
T Consensus 229 ~~~~~-~~~~~--~~--~~----~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~----- 294 (472)
T TIGR00769 229 RNVLT-DPRSY--NP--AL----KEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQ----- 294 (472)
T ss_pred hcccC-Ccccc--ch--hh----ccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 22211 11000 00 00 0000000111123456678889888777666666544433333222222221
Q ss_pred ccccc----chhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHH
Q 013991 318 LNYST----QMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIP 366 (432)
Q Consensus 318 ~g~s~----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 366 (432)
+ -++ .-.|.+....++...+.++ +.+++.+|+|-+....+.-++..+
T Consensus 295 ~-p~~~~~~~f~g~~~~~~gi~tl~~~l-~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 295 Y-PSPNEYSAFMGDFSTWTGVVSVTMML-LSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred C-CCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHH
Confidence 1 122 2244455566666666664 458999999887666655444333
No 220
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.78 E-value=5.5e-07 Score=80.37 Aligned_cols=354 Identities=13% Similarity=0.085 Sum_probs=178.0
Q ss_pred CCCchhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhh-----ccCC
Q 013991 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD-----RYGR 111 (432)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~d-----r~Gr 111 (432)
+..++.+..+....++.++..+... .+|.+.+.-|.|.++ .+...-++. --.--+.|.++.| |+||
T Consensus 27 ~~d~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~------~a~fS~ay~--P~sLKllWaPiVDs~y~k~~Gr 97 (510)
T KOG3574|consen 27 KGDRSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTS------QAIFSFAYW--PFSLKLLWAPIVDSVYSKRFGR 97 (510)
T ss_pred hhhhhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhh------hhhhhhhhh--HHHHHHHHHhhhHHHHHHhhcc
Confidence 3445678888888999999998888 889999988888877 443322221 1123468899999 9999
Q ss_pred hHHHHHH-HHHHHHHHHHHhh-----------hhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHH
Q 013991 112 KPVIIMG-TASVVIFNTLFGL-----------SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTA 178 (432)
Q Consensus 112 r~~l~~~-~~~~~~~~~~~~~-----------~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~ 178 (432)
||.-++- ..+.+..+.+.+. .++...+....++.-+..+..-.+ -.+.-....+++-|-+......+
T Consensus 98 rksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg 177 (510)
T KOG3574|consen 98 RKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVG 177 (510)
T ss_pred ccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHH
Confidence 8865432 2222222222221 123333323333444444444333 55555566677777666655555
Q ss_pred HHHHHHHHHHHHhhhcccC------CcCCCcccccccccCccchHHHHHHHHHHHH-HHHHHhhcccccCCCCCCCcchh
Q 013991 179 WGIGLIIGPALGGFLAQPA------EKYPNLFSSESLFGKFPYFLPCLCISLFAFG-VTIAAFWLPETLHRHNDDDDSCD 251 (432)
Q Consensus 179 ~~~g~~~g~~~~~~l~~~~------~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~ 251 (432)
.+.|..++..+--.+.... -++|..-|.-..- .+ ....+...++ ..+..++-+|.+.. ..++.
T Consensus 178 ~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~-gy-----~~fwg~~~~vat~Lv~~~kke~~~~-~~~e~--- 247 (510)
T KOG3574|consen 178 QTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLA-GY-----LWFWGALFIVATTLVALLKKENDES-VDEEL--- 247 (510)
T ss_pred HhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhh-HH-----HHHHHHHHHHHHHHHHHhcCCCchh-hhhhh---
Confidence 5555555544432222210 0112111110000 00 1112222222 22233332332222 11100
Q ss_pred hhHHHhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHH
Q 013991 252 VSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAI 331 (432)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~ 331 (432)
+... ++.-+..+++++-|.+.....+....-..+.+-....++-+.+ .|.+..+.+++..+
T Consensus 248 ------~~~i-------~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle------~Gv~ke~Lal~~v~ 308 (510)
T KOG3574|consen 248 ------ELGI-------HESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE------HGVPKEELALIAVP 308 (510)
T ss_pred ------hcCH-------HHHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH------cCCChhHheeeeee
Confidence 0000 0111234556677777777666666666666666666665554 58888887766533
Q ss_pred HHHHHHHHHHHhHHHHHHHh-----ChhHHHHHHHHHHHHHHHH-hhHHHhhhh---hHHHHHHHHHHHHHHhhhhhHHH
Q 013991 332 TGFSLLVFQLSLYPFLERIL-----GPIMVARIAGVLTIPLLTS-YPYIAMLSG---FGLAFLLNCASVVKNLLSVSIIT 402 (432)
Q Consensus 332 ~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 402 (432)
.--..++....++.+.+++. -+....++........+.. .+......+ ...+++......+.+.+....+-
T Consensus 309 ~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv 388 (510)
T KOG3574|consen 309 LVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFV 388 (510)
T ss_pred hhhHHHhhhhhheeecCCCCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHH
Confidence 33333333333333333221 1222233333322222221 111111011 12334444445566666666777
Q ss_pred HHHHHHhccccccchhhhhhHHHHHh
Q 013991 403 GLFILQNRAVVRVLTYTLSCHFWFVK 428 (432)
Q Consensus 403 ~~~~~~~~~~p~~~~g~~~~~~~~~~ 428 (432)
..++..+++.|++..|+.+.+.+++.
T Consensus 389 ~~maf~aqisdp~iggTymTlLNTLs 414 (510)
T KOG3574|consen 389 SGMAFHAQISDPAIGGTYMTLLNTLS 414 (510)
T ss_pred HHHHHHhhcCCcccCccHHHHHHHHH
Confidence 88888899999999999998888764
No 221
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.77 E-value=1.3e-07 Score=90.18 Aligned_cols=180 Identities=14% Similarity=0.229 Sum_probs=121.1
Q ss_pred CCCCchh------HHHHHHHHHHhhccccchhhhHHHHH-HHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhc
Q 013991 36 SGLPITE------LFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR 108 (432)
Q Consensus 36 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr 108 (432)
.+.|++. ++.+++..+........+....|.+. +-+|.+..+ .|++.++..+...+..+++|.++||
T Consensus 247 ~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~------~G~~salP~l~~~~~k~~~g~lsD~ 320 (466)
T KOG2532|consen 247 PPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRE------TGFLSALPFLAMAIVKFVAGQLSDR 320 (466)
T ss_pred CCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhh------hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456555 55778888888888888889999555 568999999 9999999999999999999999998
Q ss_pred cCC---------hHHHHHHHHHHHHHHHHHhhhhh--H-HHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhH
Q 013991 109 YGR---------KPVIIMGTASVVIFNTLFGLSVN--F-WMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTV 175 (432)
Q Consensus 109 ~Gr---------r~~l~~~~~~~~~~~~~~~~~~~--~-~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~ 175 (432)
.-+ |-.=.++....+++.+..++.++ . ..+++.-+..++ .|..... ..-..|. .|+.-+..+|+.
T Consensus 321 l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~-~g~~~~Gf~~~~~~~-apq~a~~l~g~~ 398 (466)
T KOG2532|consen 321 LTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGL-SGFNISGFYKNHQDI-APQHAGFVMGII 398 (466)
T ss_pred HhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHH-cccchhhhHhhhhhc-cchHHHHHHHHH
Confidence 755 22224445555555555555442 2 122222222222 2222222 3333333 456779999999
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhc
Q 013991 176 STAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWL 236 (432)
Q Consensus 176 ~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (432)
+....+...++|.+.+.+.+ .+ + +..|+..|++.+++.++.-+...+.
T Consensus 399 ~~~~~~~~~~~P~~vg~~~~-~~---t---------~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 399 NFVGALAGFIAPLLVGIIVT-DN---T---------REEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHHHHHHHHheeeEeC-CC---C---------HHHHHHHHHHHHHHHHHhchheeEe
Confidence 99999999999999999985 11 1 4456777788877776655444333
No 222
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.77 E-value=9.7e-08 Score=81.05 Aligned_cols=322 Identities=12% Similarity=0.034 Sum_probs=173.2
Q ss_pred hhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhh
Q 013991 53 TALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS 132 (432)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 132 (432)
...+.-...|...++-+.++....+ +|.+..+..-..++...+.|.++||-|||+.-+.-++.+.++|+ .-.+
T Consensus 49 mmAgDWLQgPYvYyLYstYgFgkG~------IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhS 121 (454)
T KOG4332|consen 49 MMAGDWLQGPYVYYLYSTYGFGKGD------IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHS 121 (454)
T ss_pred HHhhhhhcCceeeeeehhcCccCCc------cceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcC
Confidence 3334445567766777888998888 89888888888899999999999999999975554544444433 3357
Q ss_pred hhHHHHHHHHHHHhhhccchhhH--HhhhhhhcccchhhhhhhhHH--------HHHHHHHHHHHHHHhhhcccCCcCCC
Q 013991 133 VNFWMAVLTRFLLGSLNGLLGPI--KAYACEIFREEHQALGLSTVS--------TAWGIGLIIGPALGGFLAQPAEKYPN 202 (432)
Q Consensus 133 ~~~~~l~~~r~~~G~~~g~~~~~--~~~i~~~~~~~~r~~~~~~~~--------~~~~~g~~~g~~~~~~l~~~~~~~~~ 202 (432)
+.+-.++++|++-|+..+....+ .-++.|.-.+ |+.-.-+.. .+..+-.+++.+.+-.+.+
T Consensus 122 pqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnek--r~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd------- 192 (454)
T KOG4332|consen 122 PQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEK--RGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVD------- 192 (454)
T ss_pred CceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhc--cCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHH-------
Confidence 78889999999999988876654 5567777633 332111111 2223334445555555554
Q ss_pred cccccccccCccchHHHHHHHHHHHHH-HHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccc
Q 013991 203 LFSSESLFGKFPYFLPCLCISLFAFGV-TIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKN 281 (432)
Q Consensus 203 ~~gw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (432)
.+ ..|...||-.++....+. .+.+---.|.-.+..+++ +... +-+...+.+..+
T Consensus 193 ~~-------slGPVAPFdAAacfLaigmAvil~~W~ENygdps~~k----dllt--------------qf~gaa~aiaSD 247 (454)
T KOG4332|consen 193 TF-------SLGPVAPFDAAACFLAIGMAVILSSWSENYGDPSENK----DLLT--------------QFKGAARAIASD 247 (454)
T ss_pred Hh-------ccCCCCchHHHHHHHHHHHHHHHhhhhhccCChhhhH----HHHH--------------HhhHhHHHHhcc
Confidence 11 334445555544433332 222222233322211111 0000 011122334455
Q ss_pred hhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhC--hhHHHHH
Q 013991 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILG--PIMVARI 359 (432)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~ 359 (432)
+++..+..+-.++-.....+ +++.++... -+-...--|.+++.+-....+|+- +..++..|-. ....+.+
T Consensus 248 ~ki~LLG~iqsLFE~smytF-----VFLWTPaLs--pn~e~iPhGfiFatFMlASmLGSS-la~Rl~s~s~~~ve~ymqi 319 (454)
T KOG4332|consen 248 EKIALLGAIQSLFEGSMYTF-----VFLWTPALS--PNDEEIPHGFIFATFMLASMLGSS-LASRLLSRSSPKVESYMQI 319 (454)
T ss_pred hHHHHHHHHHHHHhhhhhee-----eeeecccCC--CCcccCCchhHHHHHHHHHHHhhH-HHHHHHhcCCcccchHHHH
Confidence 55544433333322222111 233333111 011122257777777777777774 4433333322 2234445
Q ss_pred HHHHHHHHHHHhhHHHh-hhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhH
Q 013991 360 AGVLTIPLLTSYPYIAM-LSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCH 423 (432)
Q Consensus 360 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~ 423 (432)
.+++.++.+.+...... .++......-+++.+..-.+.+..+|...-+-++..|++.|++..-.
T Consensus 320 vf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNf 384 (454)
T KOG4332|consen 320 VFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNF 384 (454)
T ss_pred HHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhh
Confidence 55554444333222211 11112222334555555567778899999999999999999876543
No 223
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.73 E-value=2.2e-07 Score=88.13 Aligned_cols=123 Identities=15% Similarity=0.085 Sum_probs=89.8
Q ss_pred HHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHH-HHHHHHHHhh--hhhHHHHHHHH
Q 013991 66 FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS-VVIFNTLFGL--SVNFWMAVLTR 142 (432)
Q Consensus 66 ~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~-~~~~~~~~~~--~~~~~~l~~~r 142 (432)
.+.+.+|.+..+ .+++.....++..++.++.+++.||++++........+ ..+....... ..+.+.+.+..
T Consensus 233 ~~~~~~g~~~~~------~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (394)
T PRK11652 233 LMGAVLGLSSMT------VSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPA 306 (394)
T ss_pred HHHHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHH
Confidence 334448888887 89998888999999999999999999843333222222 2222122222 23556677778
Q ss_pred HHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 143 FLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 143 ~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
++.|++.+...+. .++..|..| ++++...++.+....+|..+++.+++.+.+
T Consensus 307 ~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~ 359 (394)
T PRK11652 307 ALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQ 359 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 8888888877775 888888886 578999999999999999999999988865
No 224
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.72 E-value=9.5e-07 Score=78.84 Aligned_cols=148 Identities=17% Similarity=0.128 Sum_probs=115.4
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhc-cCChHHHHHHHHH
Q 013991 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIMGTAS 121 (432)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~ 121 (432)
-+.+.+..-+..+..++....+|.+..|.|.|..+ .|++.+...+.....++..-.+++| -++|+..+...++
T Consensus 210 aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~------aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~ 283 (395)
T COG2807 210 AWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAE------AGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLL 283 (395)
T ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHH------hhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 44455555566777788889999999999999999 9999999999999999999999996 4567777888888
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-Hhhhhhhcc-cchhhhhhhhHHHHHHHHHHHHHHHHhhhcccC
Q 013991 122 VVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPA 197 (432)
Q Consensus 122 ~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 197 (432)
+.++.+.+.+.+.-..+.- -++.|+|.|...+. ..++.+..+ +++-++-.++.+....+=..+||.+.|++-|..
T Consensus 284 ~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~ 360 (395)
T COG2807 284 MLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDAT 360 (395)
T ss_pred HHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhc
Confidence 8888887777654332222 48899998887775 888877776 455566666667666666788999999999853
No 225
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.71 E-value=2.4e-07 Score=86.91 Aligned_cols=152 Identities=12% Similarity=0.194 Sum_probs=115.1
Q ss_pred chhHHHHHHHHHHhhccccchhhhHHHHHH-HhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHH
Q 013991 40 ITELFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMG 118 (432)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~ 118 (432)
.|.+..+.+..++.....++......++.+ .+|.++.. ..+.......+.+++.+++.++++|+|+|+++.++
T Consensus 235 Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~------~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~ 308 (467)
T COG2211 235 NRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELF------AYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIG 308 (467)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHH------HHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHH
Confidence 344555555566666666666666655543 34555555 66777778888888899999999999999999999
Q ss_pred HHHHHHHHHHHhhhh--hHHHHHHHHHHHhhhccchhhH-Hhhhhhhccc-------chhhhhhhhHHHHHHHHHHHHHH
Q 013991 119 TASVVIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE-------EHQALGLSTVSTAWGIGLIIGPA 188 (432)
Q Consensus 119 ~~~~~~~~~~~~~~~--~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~ 188 (432)
.++.+++.++..+.+ +.+.+++..++.+++.+...+. .++++|..+- +.-|...+......=+|..++..
T Consensus 309 ~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~ 388 (467)
T COG2211 309 LLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGF 388 (467)
T ss_pred HHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHH
Confidence 999999999888865 7888888889999998888776 8888877652 33366677777777788999988
Q ss_pred HHhhhcccC
Q 013991 189 LGGFLAQPA 197 (432)
Q Consensus 189 ~~~~l~~~~ 197 (432)
+.|++....
T Consensus 389 ~~g~~L~~~ 397 (467)
T COG2211 389 IPGWILGAI 397 (467)
T ss_pred HHHHHHHHc
Confidence 888887733
No 226
>PRK11462 putative transporter; Provisional
Probab=98.70 E-value=2.2e-07 Score=89.68 Aligned_cols=147 Identities=12% Similarity=0.130 Sum_probs=91.5
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHH
Q 013991 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (432)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 122 (432)
+..+....++.............++.+...-+++. .+.+...+.++.+++.+++++++||+|+|+++..+..+.
T Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~~------~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~ 303 (460)
T PRK11462 230 WRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEV------FVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALL 303 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChHH------HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence 33333334444444444444444444443333333 566777888888999999999999999999877655544
Q ss_pred HHHHHHHhhhh--hHHHHHHHHHHHhhhccchhhH-Hhhhhhhcc-------cchhhhhhhhHHHHHHHHHHHHHHHHhh
Q 013991 123 VIFNTLFGLSV--NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR-------EEHQALGLSTVSTAWGIGLIIGPALGGF 192 (432)
Q Consensus 123 ~~~~~~~~~~~--~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 192 (432)
.+..++..+.+ +.+.+++.-++.|++.+...+. .++++|..+ +++.|...+......-+|..+|+.+++.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~ 383 (460)
T PRK11462 304 AVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGW 383 (460)
T ss_pred HHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44333333322 2333444455667766655554 677777766 2333555577778888999999999998
Q ss_pred hcc
Q 013991 193 LAQ 195 (432)
Q Consensus 193 l~~ 195 (432)
+.+
T Consensus 384 iL~ 386 (460)
T PRK11462 384 MLA 386 (460)
T ss_pred HHH
Confidence 886
No 227
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.70 E-value=3.9e-08 Score=91.65 Aligned_cols=151 Identities=21% Similarity=0.341 Sum_probs=126.8
Q ss_pred HHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHH
Q 013991 47 WIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFN 126 (432)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 126 (432)
++..++.+.+...+..++--..+|.+..+.- .|........+-++.-++.+++.+|+|+-+++..++.+..+=.
T Consensus 377 f~~av~mG~g~~lv~tFLfWHled~~~~~~L------fGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf 450 (618)
T KOG3762|consen 377 FFVAVVMGAGVGLVFTFLFWHLEDLGGIKTL------FGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRF 450 (618)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCccee------eeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHH
Confidence 3344445555555556665667888876666 8877788888888889999999999999999999999999999
Q ss_pred HHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhH-HHHHHHHHHHHHHHHhhhcccCCcCCCcc
Q 013991 127 TLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTV-STAWGIGLIIGPALGGFLAQPAEKYPNLF 204 (432)
Q Consensus 127 ~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~~~~~l~~~~~~~~~~~ 204 (432)
+.....+|.|+.+...+++|+..+..+.+ .+|+++..||+-|..+.++. ....++|-.+|.++||.+.+ .+
T Consensus 451 ~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~-------~f 523 (618)
T KOG3762|consen 451 LYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVE-------RF 523 (618)
T ss_pred HHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhhe-------ee
Confidence 99999999999999999999998888775 99999999999999999998 56678999999999999998 55
Q ss_pred cccccc
Q 013991 205 SSESLF 210 (432)
Q Consensus 205 gw~~~~ 210 (432)
|-++.|
T Consensus 524 g~~ttf 529 (618)
T KOG3762|consen 524 GARTTF 529 (618)
T ss_pred hhHHHH
Confidence 555554
No 228
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.68 E-value=3.1e-07 Score=87.37 Aligned_cols=146 Identities=12% Similarity=-0.055 Sum_probs=98.4
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHH
Q 013991 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (432)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 122 (432)
+....+..++...........++.+.++.+.+.+... .+...+.+..+..++.++.|++.||+++|+++.+..++.
T Consensus 234 ~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~----a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~ 309 (410)
T TIGR00885 234 YREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGF----AANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIG 309 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHH----HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 3333444444333333444556666555433222211 455666677788899999999999999999999999988
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 123 VIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 123 ~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
.+.+++....++... ...-++.|++.+...|. .+...+..+++.+....++.. ..+|..+.|.+.|++.|
T Consensus 310 ~~~~ll~~~~~~~~~-~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~--~~~Gga~~p~l~G~~~d 380 (410)
T TIGR00885 310 MALCLGSIFAGGHVG-LYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVM--AIIGGGIVPPLQGFIID 380 (410)
T ss_pred HHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHH--HHhccchHHHHHHHHHH
Confidence 888888888766544 44455667766666675 888888888665433333332 23999999999999998
No 229
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.67 E-value=4.6e-07 Score=87.85 Aligned_cols=150 Identities=13% Similarity=0.092 Sum_probs=106.8
Q ss_pred HHHHHHHHHhhccccchhhhHHHHHHH-hcCCccccchhhhhhHHHHHHhHHHHHHHHhhh----hhhhc-cCChHHH--
Q 013991 44 FSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWG----LVADR-YGRKPVI-- 115 (432)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G----~l~dr-~Grr~~l-- 115 (432)
..+++...+......-....++.++++ .+.+.. ......+++.+...+..++.+++.. ++.|| .+.+...
T Consensus 275 l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~--~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~ 352 (475)
T TIGR00924 275 IVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEML--GMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKF 352 (475)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHhcccccc--ceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHH
Confidence 334444444444444444545544433 332211 1112267888888888888888755 45554 3334433
Q ss_pred HHHHHHHHHHHHHHhh---------hhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHH
Q 013991 116 IMGTASVVIFNTLFGL---------SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLII 185 (432)
Q Consensus 116 ~~~~~~~~~~~~~~~~---------~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 185 (432)
.+|.++.+++.+..++ ..|++++++..++.++|.....|. .+++.+..|++.|++.+|++.....+|..+
T Consensus 353 ~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l 432 (475)
T TIGR00924 353 TLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLL 432 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 7788888888777764 468999999999999999999887 999999999999999999999999999999
Q ss_pred HHHHHhhhcc
Q 013991 186 GPALGGFLAQ 195 (432)
Q Consensus 186 g~~~~~~l~~ 195 (432)
++.+......
T Consensus 433 ~~~~~~~~~~ 442 (475)
T TIGR00924 433 GGYLATFGAV 442 (475)
T ss_pred HHHHHHHHhc
Confidence 9998887765
No 230
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.61 E-value=1.1e-07 Score=85.39 Aligned_cols=157 Identities=18% Similarity=0.221 Sum_probs=116.4
Q ss_pred HHHhhccccchhhhHHH-HHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccC--ChHHHHHHHHHHHHHH
Q 013991 50 VLCTALPISSLFPFLYF-MIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG--RKPVIIMGTASVVIFN 126 (432)
Q Consensus 50 ~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~G--rr~~l~~~~~~~~~~~ 126 (432)
.....+.....-|.++. ..+.+..+..+ .|...--..+.+.++..+.|.++||++ |-.....+++..++++
T Consensus 279 i~~~n~~lafLePtlslwm~e~m~~p~w~------~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~ 352 (464)
T KOG3764|consen 279 ITFSNSSLAFLEPTLSLWMLETMFTPGWE------VGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSS 352 (464)
T ss_pred hhhccchHHHhCcccHHHHHHhccCCCcc------eeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHh
Confidence 33445555666777775 45667755557 888888888999999999999999999 5444556677777788
Q ss_pred HHHhhhhhHHHHHHHHHHHhhhccchhh----HHhhhhhhcccc---hhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCc
Q 013991 127 TLFGLSVNFWMAVLTRFLLGSLNGLLGP----IKAYACEIFREE---HQALGLSTVSTAWGIGLIIGPALGGFLAQPAEK 199 (432)
Q Consensus 127 ~~~~~~~~~~~l~~~r~~~G~~~g~~~~----~~~~i~~~~~~~---~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 199 (432)
....+++++.++.+-++..|++.+.... ...++.|.-..+ ..|...++...++++|..+||.++|.+.+
T Consensus 353 ~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~---- 428 (464)
T KOG3764|consen 353 GPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVE---- 428 (464)
T ss_pred chhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchhee----
Confidence 8888999999999988888877666443 333444433333 56789999999999999999999999998
Q ss_pred CCCcccccccccCccchHHHHHHHHHHHH
Q 013991 200 YPNLFSSESLFGKFPYFLPCLCISLFAFG 228 (432)
Q Consensus 200 ~~~~~gw~~~~~~~~~~~~~~~~~~~~~~ 228 (432)
++++.+...+.++..++
T Consensus 429 ------------~iGF~wl~~iig~~n~i 445 (464)
T KOG3764|consen 429 ------------AIGFEWLMTIIGILNLI 445 (464)
T ss_pred ------------ehhHHHHHHHHHHHHHH
Confidence 55555555555555554
No 231
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.60 E-value=1.3e-06 Score=79.76 Aligned_cols=172 Identities=17% Similarity=0.140 Sum_probs=129.8
Q ss_pred HHHhhccccchhhhH-HHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhh-ccCChHHHHHHHHHHHHHHH
Q 013991 50 VLCTALPISSLFPFL-YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD-RYGRKPVIIMGTASVVIFNT 127 (432)
Q Consensus 50 ~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~d-r~Grr~~l~~~~~~~~~~~~ 127 (432)
.++..+..++....+ |+=.+-||.+..| ...++.....|..++-...|++.. |.++|+.-.+++....++..
T Consensus 217 l~l~t~a~~~QD~iLEPygg~Vfgmsv~e------TT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~ 290 (403)
T PF03209_consen 217 LFLGTLAFFMQDVILEPYGGEVFGMSVGE------TTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFA 290 (403)
T ss_pred HHHHHHHHHhhHHHcCCchhHHcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHH
Confidence 334444455556666 4456779999999 899999999999999999998877 67778888888888777766
Q ss_pred HHhh---hhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCc
Q 013991 128 LFGL---SVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNL 203 (432)
Q Consensus 128 ~~~~---~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~ 203 (432)
+..+ ..+.+.+...-++.|++.|.+... .+...|...+++.|..+|.++....++..+|..++|.+.|....+...
T Consensus 291 lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~ 370 (403)
T PF03209_consen 291 LIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGN 370 (403)
T ss_pred HHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 6544 356788888889999999999886 889999999999999999999999999999999999998743211100
Q ss_pred ccccccccCccchHHHHHHHHHHHHHHHHH
Q 013991 204 FSSESLFGKFPYFLPCLCISLFAFGVTIAA 233 (432)
Q Consensus 204 ~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (432)
. ...+|-..|.+-++..++.+...
T Consensus 371 -----~-~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 371 -----S-PALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred -----C-cchHHHHHHHHHHHHHHHHHHHH
Confidence 0 03345566666666555544443
No 232
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.58 E-value=9.9e-07 Score=82.71 Aligned_cols=129 Identities=14% Similarity=0.035 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHH
Q 013991 284 LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 363 (432)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 363 (432)
++...+.+++.......+..+.|.++++. +|+|+.+.+++.+...++..+++ ++.+++.||+|+|+.+.++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~s~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~ 76 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDD-----LGLSTAQLGNLVAVPVLAGAVLR-IILGFLVDKFGPRYTTTLSLLL 76 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHH-----hCCCHHHhhHhhHHHHHHHHHHH-HHHHHHHHHhCchHHHHHHHHH
Confidence 34455555555666666677777555554 79999999999999999999998 6899999999999999999988
Q ss_pred HHHHHHHhhHHH-hhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHH
Q 013991 364 TIPLLTSYPYIA-MLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFW 425 (432)
Q Consensus 364 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~ 425 (432)
..++.++..+.. ... .+.+..++.+.+.+ ..+....++.+..|+++|+++.+.+.
T Consensus 77 ~~i~~~~~~~~~~~~~------~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~ 132 (366)
T TIGR00886 77 LAIPCLWAGLAVQSYS------VLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAA 132 (366)
T ss_pred HHHHHHHHHHHhhhHH------HHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHH
Confidence 888877776654 222 23334444455443 34556788899999999999888765
No 233
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.56 E-value=5.3e-08 Score=89.10 Aligned_cols=194 Identities=14% Similarity=0.032 Sum_probs=132.6
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchh--hhhhHHHHHH-hHHHHHHHHhhhhhhhccCChHHHHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIG--SYAGYVGSSF-MFGRALTSVFWGLVADRYGRKPVIIM 117 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~--~~~~~~~s~~-~~~~~~~~~~~G~l~dr~Grr~~l~~ 117 (432)
+.++..+..+|+.-+..+........+.++.|..+++++.. .-......+. ..+++.+-.+...+.|++|||+..+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 34455667777777777888888889999888877663220 0112222222 23334466778889999999999999
Q ss_pred HHHHHHHHHHHHhhhhh----HHHHHHHHHHHhhh--ccchhhHHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHh
Q 013991 118 GTASVVIFNTLFGLSVN----FWMAVLTRFLLGSL--NGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGG 191 (432)
Q Consensus 118 ~~~~~~~~~~~~~~~~~----~~~l~~~r~~~G~~--~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 191 (432)
+.+++++..+..+...| -..+++...+..+. .|.......+-+|.+|.+.|+.+-|+..+..=.|+++|...-.
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~ 463 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFL 463 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhh
Confidence 99999999998888765 12223333333332 1222223556789999999999999999999999999998888
Q ss_pred hhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCC
Q 013991 192 FLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHND 245 (432)
Q Consensus 192 ~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 245 (432)
.+.+.. +|.. .+.+..+++.+.+.+..++..+++||+..+..+
T Consensus 464 ~~t~~~--yp~~---------~g~~~v~~i~~~~~~~gi~~T~l~pEtk~~~le 506 (538)
T KOG0252|consen 464 YLTDHN--YPPN---------IGVRNVFIILAGCMLLGILFTLLIPETKGKSLE 506 (538)
T ss_pred Hhhhcc--CCcc---------ccchHHHHHHHHHHHHhHheeEEeecccccCHH
Confidence 887632 3333 334455577777777777777888988765443
No 234
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.56 E-value=4.5e-10 Score=108.56 Aligned_cols=164 Identities=18% Similarity=0.274 Sum_probs=101.2
Q ss_pred cchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHh--h---h
Q 013991 58 SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG--L---S 132 (432)
Q Consensus 58 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~--~---~ 132 (432)
.......+.+.++.+.+... . ... ...+...++.+....+.||+|||+.++.+..+.+++.+..+ . .
T Consensus 270 ~~~~~~~~~i~~~~~~~~~~-~----~~~---~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~ 341 (451)
T PF00083_consen 270 NFIFYYSPSIFENAGISNSF-L----ATL---ILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGV 341 (451)
T ss_pred cccccccccccccccccccc-c----ccc---cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 34444556677777776651 0 222 22344456667777999999999999999988888877664 1 1
Q ss_pred hh-----HHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccc
Q 013991 133 VN-----FWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSS 206 (432)
Q Consensus 133 ~~-----~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw 206 (432)
++ ...+...............+. ..+..|.+|.+.|+++.++......++..+++.+...+.+. .+
T Consensus 342 ~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~-------~~- 413 (451)
T PF00083_consen 342 SSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNN-------LG- 413 (451)
T ss_pred ccccccccccceeeeecccccccccccccccccccccccccccccccccccccccccccccccccccccc-------cc-
Confidence 11 112221211111112123344 68889999999999999999888888888888887777651 11
Q ss_pred cccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCC
Q 013991 207 ESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHN 244 (432)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 244 (432)
.+.......++..+..++..+++||+..+..
T Consensus 414 -------~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l 444 (451)
T PF00083_consen 414 -------GWGVFLIFAGVCLIAIIFVYFFLPETKGKTL 444 (451)
T ss_pred -------ccccchhhHHHHHHHHhheeEEEeeCCCCCH
Confidence 0111123333334445556678999876543
No 235
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.55 E-value=1.3e-06 Score=83.83 Aligned_cols=136 Identities=10% Similarity=-0.031 Sum_probs=97.5
Q ss_pred chhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHh-ChhHHHHH
Q 013991 281 NWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL-GPIMVARI 359 (432)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~ 359 (432)
.+.++..........+...+...++|.|+.+. +|++..+++.+.........++. +++++++||+ |||+.+.+
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~-----lgls~~~a~~i~~~~~~~~~l~~-ligG~LaDRilGrrr~ili 81 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQ-----LKYDDNHAYELFSAYCSLVYVTP-ILGGFLADKVLGNRMAVML 81 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHccCcHHHHHH
Confidence 34555556666666777788888999998775 79999999999999888888887 6999999999 99999999
Q ss_pred HHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhcccccc--chhhhhhHHHHH
Q 013991 360 AGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRV--LTYTLSCHFWFV 427 (432)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~g~~~~~~~~~ 427 (432)
+.++..++.+++....... . ...+...+...+.+...+...+++.|..|++ +|.++.+.+|..
T Consensus 82 G~il~~lg~lll~~~~~~~---~--~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~ 146 (493)
T PRK15462 82 GALLMAIGHVVLGASEIHP---S--FLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAA 146 (493)
T ss_pred HHHHHHHHHHHHHHhhcch---h--HHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHH
Confidence 9888887766554221111 0 1222222223344555577788899999875 688888887754
No 236
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.54 E-value=9.4e-07 Score=80.04 Aligned_cols=148 Identities=16% Similarity=0.128 Sum_probs=118.2
Q ss_pred CchhHHHHHHHHHHhhccccchhhhHHHHHHH-hcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHH
Q 013991 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIM 117 (432)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~ 117 (432)
+.+.+..-.++.|+...........++.+..+ .|.++.+ .+...+.+..+..+|.++..++..|+...|.+..
T Consensus 234 ~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~------aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf 307 (422)
T COG0738 234 QNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQ------AAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAF 307 (422)
T ss_pred hChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 34555666666777766677777888877777 7888888 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 118 GTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
..++..+.++..+++++...++.. ++.|+..+...|. .+...+..|+ .....+..-.+..+|+++-|.+.|++.|
T Consensus 308 ~a~~~ill~~~~~l~~g~v~~~~l-~~ig~F~simfPTIfslal~~l~~--~ts~~s~~l~maivGGAiiP~l~G~i~d 383 (422)
T COG0738 308 YALIAILLLLAVALIGGVVALYAL-FLIGLFNSIMFPTIFSLALKNLGE--HTSVGSGLLVMAIVGGAIIPPLQGVIAD 383 (422)
T ss_pred HHHHHHHHHHHHHHhcChHHHHHH-HHHHHHhHHHHHHHHHHHHhccCc--cccccceeeeeheecchHHHHHHHHHHH
Confidence 999999999999999886665544 5678877777775 8888888882 3334445555667889999999999998
No 237
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.51 E-value=4e-07 Score=63.74 Aligned_cols=80 Identities=16% Similarity=0.278 Sum_probs=73.8
Q ss_pred hhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhh
Q 013991 53 TALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS 132 (432)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 132 (432)
.++++..+.|.+|.+++|.++|.++ .|++.+...+|+.+|++...++.++..+++.+..+.+...+..+.+++.
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~------ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQ------AGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566778899999999999999999 9999999999999999999999999888999999999999999999999
Q ss_pred hhHHHH
Q 013991 133 VNFWMA 138 (432)
Q Consensus 133 ~~~~~l 138 (432)
++.+..
T Consensus 78 ~~~~~w 83 (85)
T PF06779_consen 78 HSFWLW 83 (85)
T ss_pred hchHHH
Confidence 887654
No 238
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.50 E-value=4e-06 Score=67.04 Aligned_cols=108 Identities=20% Similarity=0.186 Sum_probs=91.1
Q ss_pred HHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-Hhhhhhhccc
Q 013991 87 VGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE 165 (432)
Q Consensus 87 ~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~ 165 (432)
-.++......+++++.+.+.+++|.|+.++++.+++.+-.... +-++.+.++.+-++.|++.+..+++ ..++.+..++
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~ 120 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTE 120 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCH
Confidence 3455566677888899999999999999999999988766554 4566788899999999999999997 8899999999
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 166 EHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 166 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
++|++..+++-.....+.++|.++.-.+.+
T Consensus 121 ~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 121 ETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999988888888888887766543
No 239
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.47 E-value=5.4e-06 Score=79.35 Aligned_cols=187 Identities=16% Similarity=0.021 Sum_probs=123.1
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHH-HH-HhcCCcccc----chhhhhhHHHHHHhHHHHHHHHhhhhhhhccCC-hH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFM-IK-DFQIAKREE----DIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR-KP 113 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~s~~~~----~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~ 113 (432)
+.+..+++.+++.-++...+.....++ .+ -++.++.+. +....-.+....+.+...+.+++.-++.+|+|+ |+
T Consensus 258 ~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~ 337 (477)
T TIGR01301 258 RPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKR 337 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 345566777777777665555554433 33 344433221 110112344444555555777888889999995 77
Q ss_pred HHHHHHHHHHHHHHHHhhhhh---------------------HHHHHHHHHHHhhhccchhhH-Hhhhhhhccc--chhh
Q 013991 114 VIIMGTASVVIFNTLFGLSVN---------------------FWMAVLTRFLLGSLNGLLGPI-KAYACEIFRE--EHQA 169 (432)
Q Consensus 114 ~l~~~~~~~~~~~~~~~~~~~---------------------~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~--~~r~ 169 (432)
+..++.++.+++.....+.++ .+..++...+.|+..+..... ++++++..++ ++.|
T Consensus 338 ~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G 417 (477)
T TIGR01301 338 LWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQG 417 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCc
Confidence 779998888888877775443 266777778899988877776 9999999995 4559
Q ss_pred hhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHH-HHHHHhhcccccC
Q 013991 170 LGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFG-VTIAAFWLPETLH 241 (432)
Q Consensus 170 ~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~ 241 (432)
..+|+.+.+..+.+++..+..|.+.+ .+|-+ -...+.+.++..++ ++...+.+|++++
T Consensus 418 ~~mgilN~~I~lpQii~sl~~g~~~~-------~~g~~-------~~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 418 LSMGVLNLAIVIPQIIVSLGSGPWDQ-------LFGGG-------NLPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHH-------HcCCC-------CeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999988888655 23211 22234555665555 4455667776543
No 240
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.47 E-value=2.5e-06 Score=83.28 Aligned_cols=141 Identities=6% Similarity=-0.077 Sum_probs=97.7
Q ss_pred Cccccccchh-HHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHH-h
Q 013991 274 PKKSLLKNWP-LMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI-L 351 (432)
Q Consensus 274 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~-~ 351 (432)
...+.+++|+ ++......++..+.......+++.|+++. +|++..+++.............. .+++++.|| +
T Consensus 12 ~~~~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~-----lg~s~~~a~~~~~~~~~~~~~~~-~~~G~LaDr~~ 85 (500)
T PRK09584 12 VSLNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQ-----LGMSEADSITLFSSFSALVYGLV-AIGGWLGDKVL 85 (500)
T ss_pred CChhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcc
Confidence 3445566664 66677777777778788888899998765 78998888777766554444443 588999999 5
Q ss_pred ChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccc--hhhhhhHHH
Q 013991 352 GPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVL--TYTLSCHFW 425 (432)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~g~~~~~~~ 425 (432)
|+|+.+.++.++..++..++.+..... ..+.+...+.+.+.+...|...++..+..|+++ +..+.+.++
T Consensus 86 G~r~~~~~g~~~~~ig~~l~~~~~~~~-----~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~ 156 (500)
T PRK09584 86 GTKRVIMLGAIVLAIGYALVAWSGHDA-----GIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYY 156 (500)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhcccH-----HHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHH
Confidence 999999999888888776665432211 123344445566666677888888999887653 344555544
No 241
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.44 E-value=6.2e-06 Score=77.34 Aligned_cols=137 Identities=11% Similarity=0.046 Sum_probs=89.7
Q ss_pred cccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHH
Q 013991 278 LLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVA 357 (432)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 357 (432)
++.++......+...+..+......+++--++++ ++-.+..-|......-.+-++. .+...++.+|+|+.+++
T Consensus 367 ~~~s~~~llff~~av~mG~g~~lv~tFLfWHled------~~~~~~LfGv~~a~~~~gEI~~-~ffs~klI~kiGHv~v~ 439 (618)
T KOG3762|consen 367 VFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED------LGGIKTLFGVVSALCHAGEILF-YFFSFKLIEKIGHVNVM 439 (618)
T ss_pred HhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh------cCCcceeeeehhhhhccchHHH-HHHHHHHHHHhccccee
Confidence 4455554444444444333333333333223333 4555666664444444444443 46788999999999999
Q ss_pred HHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 358 RIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
.+++....+=++.+.+..+.+ ..+..-++.+...+..+.+.-++++..+|++.+.++.+++.-.
T Consensus 440 ~lgLa~~~~Rf~~~S~L~n~W------~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~ 503 (618)
T KOG3762|consen 440 YLGLACNVGRFLYYSYLQNPW------MVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGI 503 (618)
T ss_pred eehhhHHHHHHHHHHHhcCch------heeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHH
Confidence 988888777777766554433 4555667777888889999999999999999999999887644
No 242
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.43 E-value=3.5e-06 Score=80.36 Aligned_cols=148 Identities=8% Similarity=-0.011 Sum_probs=90.8
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHHH-HHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFMI-KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGT 119 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~ 119 (432)
+.++...+...+............|.+. +.+|.+..+ .++.......+..+++.+.+.+.+|.++++.+....
T Consensus 218 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~------~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~ 291 (413)
T PRK15403 218 RLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQ------FAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAV 291 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHH
Confidence 3444333333333333344444557555 456899888 899888888888888888888775555544433222
Q ss_pred HHHHHHHHHHh-----hhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhh
Q 013991 120 ASVVIFNTLFG-----LSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (432)
Q Consensus 120 ~~~~~~~~~~~-----~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 193 (432)
.+..++..+.. ..++++..++..++.++|.+...+. .. .+..-....+|++.++.+.....+..+++..++++
T Consensus 292 ~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~-~al~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~ 370 (413)
T PRK15403 292 PIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLFR-FTLFSNNLPKGTVSASLNMVILMVMAVSVEIGRWL 370 (413)
T ss_pred HHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHhHHHHH-HHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222322222 1233444566777788887776664 32 22222333579999999888888889999999988
Q ss_pred cc
Q 013991 194 AQ 195 (432)
Q Consensus 194 ~~ 195 (432)
.+
T Consensus 371 ~~ 372 (413)
T PRK15403 371 WF 372 (413)
T ss_pred HH
Confidence 75
No 243
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.39 E-value=3.9e-06 Score=81.59 Aligned_cols=134 Identities=9% Similarity=-0.050 Sum_probs=99.7
Q ss_pred hhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHH-hChhHHHHHH
Q 013991 282 WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI-LGPIMVARIA 360 (432)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~ 360 (432)
+.++......+...+.+++...+++.|+++. +|++..+++.+.........+.. +++++++|| +|||+++.++
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~-----lg~~~~~a~~i~~~~~~~~~~~~-~~~G~laDr~~G~r~~~~~g 87 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQ-----LGFSQEQAFITFGAFAALVYGLI-SIGGYVGDHLLGTKRTIVLG 87 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHH-hhHHHhhhhccchHHHHHHH
Confidence 4455556666667778888888888888776 78899888888777776666665 589999999 9999999999
Q ss_pred HHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccc--hhhhhhHHHH
Q 013991 361 GVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVL--TYTLSCHFWF 426 (432)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~g~~~~~~~~ 426 (432)
.++..++.+.+.+..... ..+++...+.+.+.+...|...+++.+.+|+++ |+++.+.++.
T Consensus 88 ~~~~~~g~~~~~~~~~~~-----~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~ 150 (489)
T PRK10207 88 AIVLAIGYFMTGMSLLKP-----DLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYM 150 (489)
T ss_pred HHHHHHHHHHHHHhccch-----hHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHH
Confidence 999988877766543222 123344555667778888888999999998774 4666665553
No 244
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.37 E-value=4.1e-06 Score=74.04 Aligned_cols=312 Identities=13% Similarity=0.016 Sum_probs=178.0
Q ss_pred HHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhHHhhhhhhcccchhhhhh
Q 013991 93 FGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGL 172 (432)
Q Consensus 93 ~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~~~~i~~~~~~~~r~~~~ 172 (432)
-.+.+.-.+.=.+.|-.-.|++++.-.+.......+..+.++.+.+-+.-++.|...+.-.+-++++-+..+|+++.++.
T Consensus 53 YSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaEIAYysYIYs~Vd~~~Yqrvt 132 (433)
T KOG3810|consen 53 YSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAEIAYYSYIYSKVDPEMYKRVT 132 (433)
T ss_pred HHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHHHhhhheeeeecCHHHHHHHH
Confidence 33445555666789999899999888888888888888899999988888888886555444489999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCCCCcchhh
Q 013991 173 STVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDV 252 (432)
Q Consensus 173 ~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 252 (432)
+...++.-.|-..|..++..+.... ..++...-.+......+..+..+++|..++..-.+.++.+.
T Consensus 133 ~y~RaA~L~g~~~g~vlaQlLvs~~--------------~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~~~~~~ 198 (433)
T KOG3810|consen 133 GYCRAAFLVGKFVGSVLAQLLVSLE--------------TLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHRLEDKI 198 (433)
T ss_pred HHhHHHHHHHhHHHhHHHHHHhhhc--------------ccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhcccccc
Confidence 9999999999999999998888621 22233333444444444555566777655321111111111
Q ss_pred hHHHhhhhhh--hhhh----hhccCCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhh
Q 013991 253 SYDALESASA--EVKE----EEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVG 326 (432)
Q Consensus 253 ~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g 326 (432)
...+.++... +..+ ....-.....+..+||.++.-.+-+.+....+....++.. .+..... -+-.....|
T Consensus 199 ~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q-~LW~~~~---~~~~~vyNG 274 (433)
T KOG3810|consen 199 SVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQ-ILWKEVA---PNPANVYNG 274 (433)
T ss_pred eeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHH-HHHHhhC---CCchhhhcC
Confidence 1011111111 0000 0001111233445566554443333333322222222211 1111100 011233456
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhChhHHHH--HHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHH
Q 013991 327 EVLAITGFSLLVFQLSLYPFLERILGPIMVAR--IAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGL 404 (432)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (432)
..=++..+.++++. +..|.+.-++.|..-+. ++.+..+..++++....+. ++.++..++.........+..
T Consensus 275 ~veAv~tlLGa~~~-~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~I------w~~Ya~yvlfr~~y~l~itiA 347 (433)
T KOG3810|consen 275 AVEAVSTLLGAIAA-LAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHI------WVCYAGYVLFRVIYQLTITIA 347 (433)
T ss_pred HHHHHHHHHHHHHH-HHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccce------ehhhhhHHHHHhhHhhhhhHH
Confidence 66666677777776 47777766665553333 3333333333333222221 244555555555555666777
Q ss_pred HHHHhccccccchhhhhhHHHHHhh
Q 013991 405 FILQNRAVVRVLTYTLSCHFWFVKL 429 (432)
Q Consensus 405 ~~~~~~~~p~~~~g~~~~~~~~~~~ 429 (432)
..-+++...++.-|-..|+..|+-+
T Consensus 348 ~~~iA~nL~~e~~gLvFGiNTFvAl 372 (433)
T KOG3810|consen 348 TFQIARNLSSELFGLVFGINTFVAL 372 (433)
T ss_pred HHHHHHhhhhhhheeeeehHHHHHH
Confidence 7777788888888988888887755
No 245
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.35 E-value=1.3e-06 Score=60.71 Aligned_cols=70 Identities=23% Similarity=0.529 Sum_probs=60.2
Q ss_pred HHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHH
Q 013991 46 IWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTAS 121 (432)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 121 (432)
+-...++.....+...|.+|.+.++.|.+..+ +|.+.++..+...++++++|.++||+++++.++.....
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~------iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQLGLSPSQ------IGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhhcCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 34455666667778889999999999999999 99999999999999999999999999998887765544
No 246
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.33 E-value=2e-05 Score=77.49 Aligned_cols=136 Identities=15% Similarity=0.157 Sum_probs=90.3
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHH
Q 013991 43 LFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASV 122 (432)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 122 (432)
+....+..+....+.+....+.+.+.+..|.+.+. .....+..+...++..+...+.||+|||+.++.+...+
T Consensus 297 ~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-------~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m 369 (513)
T KOG0254|consen 297 IIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-------FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGM 369 (513)
T ss_pred HHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-------HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHH
Confidence 33455555556666677777778888888877542 23444455556677777799999999999999999999
Q ss_pred HHHHHHHhhhhhH-----------HHH--HH-HHHHHhhhccchhhHHhhhhhhcccchhhhhhhhHHHHHHHHHHH
Q 013991 123 VIFNTLFGLSVNF-----------WMA--VL-TRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLII 185 (432)
Q Consensus 123 ~~~~~~~~~~~~~-----------~~l--~~-~r~~~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 185 (432)
.++.++.+..... ..+ .. .-.+..+..+.......+.+|.+|.+.|+++.++......+...+
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~ 446 (513)
T KOG0254|consen 370 SICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFL 446 (513)
T ss_pred HHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHH
Confidence 9999888764221 111 11 112222333333333678899999999999988876555544433
No 247
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.30 E-value=2.5e-05 Score=73.45 Aligned_cols=102 Identities=11% Similarity=-0.017 Sum_probs=88.8
Q ss_pred cccccch-hhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhh
Q 013991 318 LNYSTQM-VGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLL 396 (432)
Q Consensus 318 ~g~s~~~-~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (432)
+|++..+ .|.+.+.+..+..+.. +.++++.||+|.|+.+.++.+...+..++.++..... .+.+.-++.|++
T Consensus 56 lglT~~qv~G~I~s~F~ysYal~q-Ip~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~------~L~i~R~llGva 128 (511)
T TIGR00806 56 LNFTEETVTNEIIPVLPYSHLAVL-VPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVW------HMQLMEVFYSVT 128 (511)
T ss_pred cCCCHHHhcchHHHHHHHHHHHHH-HHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHH
Confidence 7999999 9999999999999998 5899999999999999999999888888887765433 466677778888
Q ss_pred hhhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 397 SVSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 397 ~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
.+..+ ....++.+.+|+++|+++++.+...
T Consensus 129 EA~~~-A~~syI~~WfP~kER~ratsi~~sg 158 (511)
T TIGR00806 129 MAARI-AYSSYIFSLVPPSRYQRAAAYSRAA 158 (511)
T ss_pred HHHHH-HHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 88888 9999999999999999999887643
No 248
>PTZ00207 hypothetical protein; Provisional
Probab=98.29 E-value=8.6e-06 Score=79.79 Aligned_cols=183 Identities=11% Similarity=0.072 Sum_probs=126.6
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHHHHHh-cCCccccchhhhhhH-HHHHHhHHHHHHHHhhhhhh---hc------c
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDF-QIAKREEDIGSYAGY-VGSSFMFGRALTSVFWGLVA---DR------Y 109 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~-~~s~~~~~~~~~~~~~G~l~---dr------~ 109 (432)
..+|+++...++.......+...+.++.+.+ |.+.+++ ... +++.+.++..+|.+..|.+. .| +
T Consensus 353 ~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~-----~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~ 427 (591)
T PTZ00207 353 ARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDA-----LNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRV 427 (591)
T ss_pred hhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCcc-----ceeeehhhhhHHHHhhHHHHHHHHHHHHhhcccccc
Confidence 4567777777777666666666777888888 6633221 122 67777777788888777766 22 2
Q ss_pred CChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHH-H
Q 013991 110 GRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIG-P 187 (432)
Q Consensus 110 Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g-~ 187 (432)
.|--.+.+..+ +.++.+++++.-....+++..++.|++.|...++ ...++|+|. |+-|+-.........+|..+- -
T Consensus 428 prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~ 505 (591)
T PTZ00207 428 PITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNR 505 (591)
T ss_pred chhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHH
Confidence 22223344444 6666666665543368999999999999999886 889999999 888998888888888888765 5
Q ss_pred HHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHH
Q 013991 188 ALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAA 233 (432)
Q Consensus 188 ~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (432)
.+.|.+.+.-.. ..|-....++..++.++++.+..++...+..
T Consensus 506 ~l~G~~Yd~ea~---k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s 548 (591)
T PTZ00207 506 LLYGEWYTQQAD---KLGQDVCTERVCVVMPLAFLLGLSFLAFITS 548 (591)
T ss_pred HHHHHHHHHHHh---hCCCCeeCCceeeHhHHHHHHHHHHHHHHHH
Confidence 667777653211 1233456668889999999988887755543
No 249
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.26 E-value=3.5e-06 Score=77.71 Aligned_cols=103 Identities=10% Similarity=0.034 Sum_probs=90.6
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhh
Q 013991 318 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLS 397 (432)
Q Consensus 318 ~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (432)
+|.+....|++.....+...+++ ++.+++.||++|++++.+|..+-.++.+..++.... +.+.+.=.+.|.+.
T Consensus 63 fni~~s~~Gll~~vf~v~~~i~s-Pl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~F------wq~~l~R~~vGiGe 135 (493)
T KOG1330|consen 63 FNISDSELGLLQTVFIVVFMIAS-PLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHF------WQVLLCRGFVGIGE 135 (493)
T ss_pred cCCCchhccchhHHHHHHHHHHH-HHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHH------HHHHHHHHHhccch
Confidence 78999999999999999999998 799999999999999999998888877777666333 34566667788899
Q ss_pred hhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 398 VSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 398 ~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
+...|...++++|.+|+++|+++.++||+.
T Consensus 136 As~~~ia~s~IaD~f~~~~Rs~~~~ify~~ 165 (493)
T KOG1330|consen 136 ASYSPIAPSLIADSFPDDKRSRVLGIFYFA 165 (493)
T ss_pred hhhcccchhHhhhcCcchhhhHHHHHhhhh
Confidence 999999999999999999999999999985
No 250
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.21 E-value=0.00021 Score=67.03 Aligned_cols=365 Identities=15% Similarity=0.100 Sum_probs=171.2
Q ss_pred HHHHHHHHHhhccccchhhhHHHHHHH--hcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhh-----ccCChHHHH
Q 013991 44 FSIWIIVLCTALPISSLFPFLYFMIKD--FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD-----RYGRKPVII 116 (432)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~d-----r~Grr~~l~ 116 (432)
..+.+.+++.++..+......|.+.++ -+.|.+|+-.-..+.+-.| .-++|.++.| |+||||.-+
T Consensus 3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~PfS--------lKlLWaPiVDs~y~~~~GRRKSWi 74 (544)
T PF13000_consen 3 ALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPFS--------LKLLWAPIVDSVYSKRIGRRKSWI 74 (544)
T ss_pred eHHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeechhH--------HHHhhhhhhhhhcccccCCcchhh
Confidence 456677888888888777788988888 7888887222122222222 2345555555 899998765
Q ss_pred HHH-HHHHHHHHHHhhhh------------------------hHHHHHHHHHHHhhhccchhh-HHhhhhhhcccchhhh
Q 013991 117 MGT-ASVVIFNTLFGLSV------------------------NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQAL 170 (432)
Q Consensus 117 ~~~-~~~~~~~~~~~~~~------------------------~~~~l~~~r~~~G~~~g~~~~-~~~~i~~~~~~~~r~~ 170 (432)
+-. .+.++..+..+... +...+....++.=+-.+..-. +-...-....+++++.
T Consensus 75 iP~Q~l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ 154 (544)
T PF13000_consen 75 IPIQYLSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGY 154 (544)
T ss_pred hHHHHHHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcch
Confidence 432 22222222221111 011122222222222222222 3444444556788887
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhhcccC--Cc----CCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCC
Q 013991 171 GLSTVSTAWGIGLIIGPALGGFLAQPA--EK----YPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHN 244 (432)
Q Consensus 171 ~~~~~~~~~~~g~~~g~~~~~~l~~~~--~~----~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 244 (432)
+......+.+.|..++..+--.+.+.. .. .|...|.-.. .++ . .+...+..++...+.++-+|.+....
T Consensus 155 ASTcqtvG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl---~~y-l-~fwg~~~l~~T~~v~~~k~E~~~~~~ 229 (544)
T PF13000_consen 155 ASTCQTVGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTL---SGY-L-KFWGWVFLIVTILVAFFKKEKPHSES 229 (544)
T ss_pred HHHHHHhHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeH---HHH-H-HHHHHHHHHHHHHHheEeeccccccc
Confidence 777777777777777665544444311 00 1111111100 001 0 01112222233344455555543221
Q ss_pred CCC-cc---hhhhHHH--hhhhhhh--hhhh---hccCCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCC
Q 013991 245 DDD-DS---CDVSYDA--LESASAE--VKEE---EGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPK 313 (432)
Q Consensus 245 ~~~-~~---~~~~~~~--~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (432)
..+ +. .+...++ .+..+++ ..++ .++.-+....++|-|++..+++.....-+.+.+......+=+.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-- 307 (544)
T PF13000_consen 230 LPKIEPINKSDGKSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-- 307 (544)
T ss_pred CccccccccccccccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH--
Confidence 110 00 0000000 0000000 0000 11112234456778888888777777666666665555544444
Q ss_pred cCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhCh--------------------------hHHHHHHHHHHHHH
Q 013991 314 KLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGP--------------------------IMVARIAGVLTIPL 367 (432)
Q Consensus 314 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--------------------------~~~~~~~~~~~~~~ 367 (432)
.|++.+..+.+..+..=..++....++.|..++-.. .+....+...-.+.
T Consensus 308 ----kG~~KE~LAl~~li~~P~qii~~~~~~Kws~g~~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~ 383 (544)
T PF13000_consen 308 ----KGLSKEDLALLVLIDFPFQIILPYYIGKWSAGSPPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVA 383 (544)
T ss_pred ----cCCCHHHhHHHHHHhhhHHHHHHHHhhhhhcCCCccccccccccccccccchhhhhhccchhhHHHHHHHHHHHHH
Confidence 588888877655444333333333333333222110 01111222111111
Q ss_pred ----HHHhhHHHhhh--hhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 368 ----LTSYPYIAMLS--GFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 368 ----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
.......+... ....+.++.+.-.+..+.....+....++-+++.+|.--|+..+..+++
T Consensus 384 a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTv 449 (544)
T PF13000_consen 384 ALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTV 449 (544)
T ss_pred HHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHH
Confidence 11111111001 1123444555556666777777888889999999999999998888765
No 251
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.21 E-value=3.2e-06 Score=81.12 Aligned_cols=140 Identities=11% Similarity=0.058 Sum_probs=89.0
Q ss_pred hHHHHHHHHHHhhccccchhhhHHHHHHH-hcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhc----cCChHHHH
Q 013991 42 ELFSIWIIVLCTALPISSLFPFLYFMIKD-FQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR----YGRKPVII 116 (432)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr----~Grr~~l~ 116 (432)
.++...+..++.....+.....+|.+.++ .|.+..+ .+.+...+.++.+++.+++|+++|| ..+|....
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~------a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~ 347 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQ------ANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFI 347 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHH------hccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 45567778888888888899999988887 5678888 8999999999999999999999999 66676666
Q ss_pred HHHHHHHHHH-HHHhhhhhHHHHHHHHHHHhhhccchhhH-Hhhhhhhcccchh-hhhhhhHHHHHHHHHHHHH
Q 013991 117 MGTASVVIFN-TLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQ-ALGLSTVSTAWGIGLIIGP 187 (432)
Q Consensus 117 ~~~~~~~~~~-~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r-~~~~~~~~~~~~~g~~~g~ 187 (432)
....+..+.. +......+......+-.....+.+...+. .....+...+..| -...+....+.+.+..++|
T Consensus 348 ~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~ 421 (495)
T KOG2533|consen 348 VFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISG 421 (495)
T ss_pred HHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhh
Confidence 6655554444 44433332333222222222233344443 6666666654443 3344444444444444333
No 252
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.09 E-value=2.7e-05 Score=76.00 Aligned_cols=195 Identities=18% Similarity=0.155 Sum_probs=130.6
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHHHH-HhcCCcc---ccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCC-hHHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFMIK-DFQIAKR---EEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR-KPVI 115 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~---~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~~l 115 (432)
|.+....+..++.++.......+.|.... -++.+.. + .++....+.++..+++.+.|.+..+++| |+.+
T Consensus 310 r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~------~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~l 383 (599)
T PF06609_consen 310 RGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITE------IGWISSPVGFGSCAGAVILGLLFSKIRHIKWQL 383 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccce------eehhhhhHHHHHHHHHHHHHHHHHHccchhHHH
Confidence 44445556666666666655566665443 4554442 4 6788888889999999999999999887 6666
Q ss_pred HHHHHHHHHHHHHHhhh--hhHHHHHHHHHHHhhhccchhh-HHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhh
Q 013991 116 IMGTASVVIFNTLFGLS--VNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF 192 (432)
Q Consensus 116 ~~~~~~~~~~~~~~~~~--~~~~~l~~~r~~~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 192 (432)
+++.++..+++.+++.. +|....+..-++.|++.|.... ......-..|+++-+.+.++....-.+|+.+|..+..-
T Consensus 384 i~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~ 463 (599)
T PF06609_consen 384 IFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNA 463 (599)
T ss_pred HHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 77777777655555443 4555556667788888776654 46666677888999999999999888888887766543
Q ss_pred hcccC-C--------------cC-----------------------CCc---------ccccccccCccchHHHHHHHHH
Q 013991 193 LAQPA-E--------------KY-----------------------PNL---------FSSESLFGKFPYFLPCLCISLF 225 (432)
Q Consensus 193 l~~~~-~--------------~~-----------------------~~~---------~gw~~~~~~~~~~~~~~~~~~~ 225 (432)
+.... . +. |.. ..-+..| ..+++.+++.....
T Consensus 464 I~~n~~~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~iPGit~~i~~a~~~A~~~aY-a~ay~~V~~~siaF 542 (599)
T PF06609_consen 464 IFTNKLPKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAIPGITPEIIAAVVAAFQEAY-AHAYRYVYYSSIAF 542 (599)
T ss_pred HHHhhhhHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 32110 0 00 000 0112334 56688888888888
Q ss_pred HHHHHHHHhhcccccCC
Q 013991 226 AFGVTIAAFWLPETLHR 242 (432)
Q Consensus 226 ~~~~~~~~~~~~e~~~~ 242 (432)
+.+.++..+++++..+.
T Consensus 543 G~vaiiaa~fl~d~~~~ 559 (599)
T PF06609_consen 543 GVVAIIAALFLGDIDKY 559 (599)
T ss_pred HHHHHHHHHHcCChHHh
Confidence 88888888888876543
No 253
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.05 E-value=0.00051 Score=65.96 Aligned_cols=259 Identities=14% Similarity=0.144 Sum_probs=138.4
Q ss_pred hhHHHHHHhH-HHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhh---------h--------------------
Q 013991 84 AGYVGSSFMF-GRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS---------V-------------------- 133 (432)
Q Consensus 84 ~~~~~s~~~~-~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---------~-------------------- 133 (432)
+..+-....+ ...+......++++|++|.+++-+....+.....++++. +
T Consensus 60 I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~ 139 (491)
T PF03219_consen 60 IPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIA 139 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHH
Confidence 4455443333 345567789999999999999877766666665555531 0
Q ss_pred --hHHHHHHHHHHHhhhccc-hhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc-cCCcCCCcccccc
Q 013991 134 --NFWMAVLTRFLLGSLNGL-LGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ-PAEKYPNLFSSES 208 (432)
Q Consensus 134 --~~~~l~~~r~~~G~~~g~-~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~~~~~~~~gw~~ 208 (432)
+.|...+..+..-+-+.. .... ..+..|.++.+|-.|..++++.+.++|.++++.+..++.+ .....+.
T Consensus 140 ~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~------ 213 (491)
T PF03219_consen 140 MFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPA------ 213 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc------
Confidence 123333444444442223 3334 8899999999999999999999999999999888888876 1111100
Q ss_pred cccCccchHH----HHHHHHHHHHHHHHHhhcccccCCCCCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccchhH
Q 013991 209 LFGKFPYFLP----CLCISLFAFGVTIAAFWLPETLHRHNDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPL 284 (432)
Q Consensus 209 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (432)
+...|... ..+..+.+++.+.....+.+.....+...+ .+.. ++....+..-....+.++|+|.+
T Consensus 214 --~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~~~-~~~~--------~kk~k~k~s~~es~k~l~kS~yL 282 (491)
T PF03219_consen 214 --GVDAWELSLNSLMGIVLILGIVIILLYRYMNKNVLTDPRFYP-SAKK--------KKKKKPKMSLKESFKLLLKSKYL 282 (491)
T ss_pred --ccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccch-hhhc--------ccccCCCccHHHHHHHHHhCHHH
Confidence 01122211 111222222222233333322111100000 0000 00000011112245667888888
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHH
Q 013991 285 MSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGV 362 (432)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 362 (432)
....+....++.........+-......+... -.++ .-.|-.....++...+.. ++++.+.+|+|-+....+.-+
T Consensus 283 ~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~-~~ys-afmG~~~~~tGivtii~~-~l~~~iir~~GW~~~AlitPi 357 (491)
T PF03219_consen 283 LCIALLVIAYGISINLVEVVWKSQLKQLYPDP-NDYS-AFMGKFSSWTGIVTIIMM-FLSSNIIRRFGWRTAALITPI 357 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc-hHHH-HHHHHHHHHHHHHHHHHH-HHHHHHHHHhhHHHHHHHhHH
Confidence 87777666666554444443333332221100 1111 224555666677777766 688899999998776665433
No 254
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.00 E-value=4.7e-05 Score=72.61 Aligned_cols=124 Identities=20% Similarity=0.281 Sum_probs=108.3
Q ss_pred HHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhh-hhhhccCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 013991 66 FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWG-LVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFL 144 (432)
Q Consensus 66 ~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G-~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~~ 144 (432)
+....++.++.+ .+...+.......+++.+.. .+...+|-|+++.+|+..-.+....++++++.|+++....+
T Consensus 267 yl~~~f~w~~~~------~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~ 340 (463)
T KOG2816|consen 267 YLKAKFGWNKKE------FSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVV 340 (463)
T ss_pred EEeeecCcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHH
Confidence 445578999988 89888888888888888777 78888999999999999999999999999999999999988
Q ss_pred HhhhccchhhHHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 145 LGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 145 ~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
.++.........++++.+..++++|+++++.+....+..+++|.+-+.+..
T Consensus 341 ~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 341 VALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred HHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 887655555569999999999999999999999999999999999877754
No 255
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.95 E-value=0.013 Score=57.75 Aligned_cols=158 Identities=13% Similarity=0.055 Sum_probs=108.2
Q ss_pred chhHHHHHHHHHHhhccc-cchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhc-cCChHHHHH
Q 013991 40 ITELFSIWIIVLCTALPI-SSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADR-YGRKPVIIM 117 (432)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~ 117 (432)
|+....+.....+.-+.. +.....+.++.++++.+... +.-..+.+.-......+..+.++|- +||-+.+.+
T Consensus 36 ~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~------aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~ 109 (571)
T KOG1237|consen 36 WLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGG------AANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINI 109 (571)
T ss_pred hHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHH------HHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 343333333333333333 34456667888999988877 7777788887778888999999996 678899999
Q ss_pred HHHHHHHHHHHHhhhhhH-------------------------HHHHHHHHHHhhhccchhhH-Hhhhhhhcc---cch-
Q 013991 118 GTASVVIFNTLFGLSVNF-------------------------WMAVLTRFLLGSLNGLLGPI-KAYACEIFR---EEH- 167 (432)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~-------------------------~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~---~~~- 167 (432)
+.++..++..+..++... ..++.+.-+..+|.|..-+. .++-+|.++ +++
T Consensus 110 ~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~ 189 (571)
T KOG1237|consen 110 GSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEV 189 (571)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchh
Confidence 988888886555432211 23445555666677777775 888899998 322
Q ss_pred h--hhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccc
Q 013991 168 Q--ALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLF 210 (432)
Q Consensus 168 r--~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~ 210 (432)
+ ...+.++....++|..++-.+-.+.-+ ..||...|
T Consensus 190 ~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~-------~~~w~lgf 227 (571)
T KOG1237|consen 190 KGIPSFFNWFYFSQNGGALLAQTVLVYIQD-------NVGWKLGF 227 (571)
T ss_pred hCcccchhHHHHHHHHHHHHHHHHHHhhhh-------cccceeec
Confidence 2 366777888888888888888877765 56665444
No 256
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.93 E-value=0.0041 Score=58.43 Aligned_cols=300 Identities=12% Similarity=0.111 Sum_probs=160.6
Q ss_pred chhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhH-HHHHHHHhhhhhhhccCChHHHHHH
Q 013991 40 ITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYGRKPVIIMG 118 (432)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~-~~~~~~~~~G~l~dr~Grr~~l~~~ 118 (432)
++.++.+.+..++..+.. ..+-.+.+.+.++.... ..+.++-+..-+ +.++..++.+++.+++.|.+++-+-
T Consensus 26 ~~kflpl~Ll~f~I~~ny----~~lR~lKDslvv~~~ga---e~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~ 98 (509)
T COG3202 26 LKKFLPLALLFFCILFNY----NLLRSLKDSLVVTRQGA---ESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYII 98 (509)
T ss_pred HHHHHHHHHHHHHHHHHH----HHHHHhhhheEeecCcc---hhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHH
Confidence 344444444444444433 33345555565542221 016777777777 6678889999999999999999888
Q ss_pred HHHHHHHHHHHhhh---------------h-----------------hHHHHHHHHHHHhhhccch-hhH-Hhhhhhhcc
Q 013991 119 TASVVIFNTLFGLS---------------V-----------------NFWMAVLTRFLLGSLNGLL-GPI-KAYACEIFR 164 (432)
Q Consensus 119 ~~~~~~~~~~~~~~---------------~-----------------~~~~l~~~r~~~G~~~g~~-~~~-~~~i~~~~~ 164 (432)
+..+....+++++. . +.|...+..++.-+-+... .-. .....|++.
T Consensus 99 ~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt 178 (509)
T COG3202 99 LGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITT 178 (509)
T ss_pred HHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 87777777777652 1 0133333333333322222 324 778899999
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhccc----cc
Q 013991 165 EEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPE----TL 240 (432)
Q Consensus 165 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e----~~ 240 (432)
.+|-.|..++++...+++..++..+..++........ ...-....+..+.+....+++.++..+++.+ .+
T Consensus 179 ~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~------~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~ 252 (509)
T COG3202 179 IEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALA------SEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDP 252 (509)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHh------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Confidence 9999999999999999999999998888876211100 0000001233334444444444444444322 11
Q ss_pred CCC-CCCCcchhhhHHHhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcc
Q 013991 241 HRH-NDDDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLN 319 (432)
Q Consensus 241 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 319 (432)
... +...++++. ..+..-....+.+.|+|.++...+...+++.+...+...+-.-....+.. ..
T Consensus 253 ~f~~~~~~kk~~~-------------k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~--~~ 317 (509)
T COG3202 253 LFYLRAKKKKKKK-------------KLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPT--TN 317 (509)
T ss_pred chhHHHhcccccc-------------cccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCC--hh
Confidence 110 000000000 00001112345667778777766666555544433333222111111000 00
Q ss_pred cccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHHH
Q 013991 320 YSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPL 367 (432)
Q Consensus 320 ~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 367 (432)
--..-.|......++..++.....++.+.+|.|-.....+.-++..+.
T Consensus 318 ~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~lit 365 (509)
T COG3202 318 EYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLIT 365 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHH
Confidence 011223445666677756666678889999988777666555444444
No 257
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.91 E-value=3.5e-05 Score=60.88 Aligned_cols=90 Identities=9% Similarity=-0.033 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhc
Q 013991 331 ITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNR 410 (432)
Q Consensus 331 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (432)
...++..+++ +..+++.||+++|+.+..+.....++.+......... ...+...+.+.+.+...+....+..|
T Consensus 6 ~~~~~~~~~~-~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~~~~ 78 (141)
T TIGR00880 6 GYALGQLIYS-PLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNIT------VLIIARFLQGFGAAFALVAGAALIAD 78 (141)
T ss_pred eehhHHHHHH-hhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHH------HHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 3455566666 5888999999999999888877777666654432211 23444556666777778889999999
Q ss_pred cccccchhhhhhHHHHH
Q 013991 411 AVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 411 ~~p~~~~g~~~~~~~~~ 427 (432)
..|+++|+++.+..+..
T Consensus 79 ~~~~~~~~~~~~~~~~~ 95 (141)
T TIGR00880 79 IYPPEERGVALGLMSAG 95 (141)
T ss_pred HCChhhhhHHHHHHHHh
Confidence 99999999998887654
No 258
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.86 E-value=0.0008 Score=66.42 Aligned_cols=141 Identities=19% Similarity=0.145 Sum_probs=96.2
Q ss_pred HHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhHHH---HHHHHHHHhhhccc-hhhHHhhhhhh
Q 013991 87 VGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWM---AVLTRFLLGSLNGL-LGPIKAYACEI 162 (432)
Q Consensus 87 ~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~---l~~~r~~~G~~~g~-~~~~~~~i~~~ 162 (432)
................+...|++|||.....+..+..++++..+....... ..+...+...+.+. ......+.+|.
T Consensus 355 ~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el 434 (521)
T KOG0255|consen 355 NFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAEL 434 (521)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 333333355555666689999999999999999999999999988764433 33333333333333 33348899999
Q ss_pred cccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHH-HHHHHHHhhcccccC
Q 013991 163 FREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFA-FGVTIAAFWLPETLH 241 (432)
Q Consensus 163 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~~ 241 (432)
+|...|..+.+..+....+|.+++|.+....... . ...++.+.+... +..++...++||+..
T Consensus 435 ~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~---------------~--~~~~~~~~~~~~~l~~~~~~~~lpet~~ 497 (521)
T KOG0255|consen 435 IPTVVRNTAVGAISAAARLGSILAPLFPLLLRQM---------------F--PLLGLILFGWLALLLGLLSLLLLPETKG 497 (521)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---------------c--ccchHHHHHHHHHHHHHHHHhcCcccCC
Confidence 9999999999999999999999999987655430 0 111112223333 334455588999877
Q ss_pred CCC
Q 013991 242 RHN 244 (432)
Q Consensus 242 ~~~ 244 (432)
...
T Consensus 498 ~~l 500 (521)
T KOG0255|consen 498 KPL 500 (521)
T ss_pred CCC
Confidence 655
No 259
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.84 E-value=0.00022 Score=66.98 Aligned_cols=133 Identities=9% Similarity=-0.048 Sum_probs=102.3
Q ss_pred ccccc-hhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHh-Chh
Q 013991 277 SLLKN-WPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERIL-GPI 354 (432)
Q Consensus 277 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~ 354 (432)
..+++ |.++.+...-+.--+.+++....+..|++.....+ +|+|.+++.-+++.++...-+.. .++||++||+ |+|
T Consensus 15 ~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~g-Lg~~~~~A~~l~~~y~slVY~t~-i~GG~laDr~LG~~ 92 (498)
T COG3104 15 KFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDG-LGFDETHATGLFSAYGSLVYLTP-IIGGWLADRVLGTR 92 (498)
T ss_pred ccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhcccc-CCcChHhhHHHHHHHHHHHHHHH-HHHHHHHHHhcchh
Confidence 34443 45555666677777888999999999988865444 78999998888887776666665 5999999995 999
Q ss_pred HHHHHHHHHHHHHHHHhhHHH-hhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccc
Q 013991 355 MVARIAGVLTIPLLTSYPYIA-MLSGFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVL 416 (432)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 416 (432)
+.+..+.++..++.+.++... ... ..++++..+++.+.+..=|....++.+..|+++
T Consensus 93 ~tI~lGail~~iGh~~L~~~~~~~~-----~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~D 150 (498)
T COG3104 93 RTIVLGAILMAIGHLVLAISSVSGP-----GGLYIGLALIIVGTGLFKPNISSLLGELYPKDD 150 (498)
T ss_pred HHHHHHHHHHHHHHHHHhccccccc-----cHHHHHHHHHHhccccccccHHHHHHHhcCCCC
Confidence 999999999999988887663 111 246677777778888888999999999987654
No 260
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.73 E-value=0.00036 Score=48.56 Aligned_cols=70 Identities=17% Similarity=0.233 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHH
Q 013991 287 SIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVL 363 (432)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 363 (432)
.-..++++.....++..++|.|..+ .|+|+.++|.+.++..+...++. ++.+.+.||.++++........
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~------~Gl~~~~iGil~~i~~~~~~~~~-pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQ------LGLSPSQIGILSAIRPLIRFLAP-PLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhh------cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCccHHHHHHHHH
Confidence 4456667777777888888888876 59999999999999999999998 6999999999998887665543
No 261
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.71 E-value=0.0017 Score=61.14 Aligned_cols=107 Identities=16% Similarity=0.228 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhh---------hHHHHHHHHHHHhhhccchhhH-Hhhhhhhcccc---hhhhhhhhHHHHH
Q 013991 113 PVIIMGTASVVIFNTLFGLSV---------NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREE---HQALGLSTVSTAW 179 (432)
Q Consensus 113 ~~l~~~~~~~~~~~~~~~~~~---------~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~---~r~~~~~~~~~~~ 179 (432)
|.++++.++..+|.++..++. +.+.++++-.+.++|.|..-|. .++.+|.++++ +|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 567888888888888854432 2356888888999999999886 99999999865 5677888999999
Q ss_pred HHHHHHHHHHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhh
Q 013991 180 GIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFW 235 (432)
Q Consensus 180 ~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (432)
++|..+++.+.+++.+ +++|...|.+.++..+++++....
T Consensus 82 n~G~~~~~~~~~~i~~----------------~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQ----------------NYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHH----------------CS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhcc----------------ccchhhhhhHHHHHHHHHHHHHHh
Confidence 9999999999999987 566666667777666655544433
No 262
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.66 E-value=6.2e-05 Score=75.52 Aligned_cols=114 Identities=11% Similarity=-0.032 Sum_probs=92.8
Q ss_pred cCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHHHHHHhhHHHhhhh--------------
Q 013991 314 KLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSG-------------- 379 (432)
Q Consensus 314 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 379 (432)
..+.++++..+.|.+.+...++.+++. ++.+++.||.+|++.+.++.++.+++.+++++.+...+
T Consensus 59 iek~F~lss~~~G~i~s~~~i~~~~~~-i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~ 137 (633)
T TIGR00805 59 IERRFKLSTSSSGLINGSYEIGNLLLI-IFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNL 137 (633)
T ss_pred hhhhhCCCCCcceeeeehhhHHHHHHH-HHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccc
Confidence 344589999999999999999999988 58889999999999999999998888877765431100
Q ss_pred -------------------------------hHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHHh
Q 013991 380 -------------------------------FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFVK 428 (432)
Q Consensus 380 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~~ 428 (432)
...+..++++-++.|++.+..++...+++.|.+|+++|+.+.++++...
T Consensus 138 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~ 217 (633)
T TIGR00805 138 SSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIA 217 (633)
T ss_pred cccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHH
Confidence 1134556678889999999999999999999999999999998877653
No 263
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.63 E-value=0.00086 Score=60.74 Aligned_cols=121 Identities=14% Similarity=0.069 Sum_probs=106.6
Q ss_pred HHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccC--ChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHh
Q 013991 69 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYG--RKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLG 146 (432)
Q Consensus 69 ~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G 146 (432)
+.+|.++.+ .|-+.+...+...+.+....+..||.. -+-.+..++.+..-..++...++....+.++-.+-.
T Consensus 290 ~rfg~ss~~------~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~s 363 (451)
T KOG2615|consen 290 GRFGYSSMQ------QGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKS 363 (451)
T ss_pred CccCCChhh------heeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHH
Confidence 568888888 888888888888899999999999988 788888888888888888888888888888888888
Q ss_pred hhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 147 SLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 147 ~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
+..+...++ ..++....|.++||..+|+......++-++||+++|.+..
T Consensus 364 f~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 364 FSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred HHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 877777776 8889999999999999999999999999999999988876
No 264
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.30 E-value=0.031 Score=53.45 Aligned_cols=37 Identities=8% Similarity=-0.171 Sum_probs=25.2
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhH
Q 013991 387 NCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCH 423 (432)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~ 423 (432)
.+..++.++..+-.......+..+.+++++|-.+..+
T Consensus 376 ~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~ 412 (437)
T TIGR00939 376 IILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGAL 412 (437)
T ss_pred HHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHH
Confidence 3345566667777777778888888888777554443
No 265
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.27 E-value=0.00047 Score=63.83 Aligned_cols=149 Identities=17% Similarity=0.086 Sum_probs=92.7
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCC-hHHHHHHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGR-KPVIIMGT 119 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~~l~~~~ 119 (432)
+++.++.+...+.....+.....+......-|.+... .|+......++.++++...|.+.||... |..+++..
T Consensus 266 ~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~------aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~ 339 (480)
T KOG2563|consen 266 RQFIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVF------AGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLY 339 (480)
T ss_pred ccHHHHHHHHhhhHHHHHHHHHHhhhccccccCCccc------cchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHH
Confidence 4444444444444444444444444344445566555 8999999999999999999999999876 55555555
Q ss_pred HHHHHHHHHHhhhh----hHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhc
Q 013991 120 ASVVIFNTLFGLSV----NFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (432)
Q Consensus 120 ~~~~~~~~~~~~~~----~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (432)
....++.......+ ..+.++..-.+.|.+.....|. .-+-.|..-|..-+...|+.+....+=.++-..+-+.+.
T Consensus 340 ~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~ 419 (480)
T KOG2563|consen 340 LFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILA 419 (480)
T ss_pred HHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHh
Confidence 55555532222222 2244555556777766666665 777777776666666777776666665556666666665
Q ss_pred c
Q 013991 195 Q 195 (432)
Q Consensus 195 ~ 195 (432)
+
T Consensus 420 ~ 420 (480)
T KOG2563|consen 420 E 420 (480)
T ss_pred h
Confidence 5
No 266
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.14 E-value=0.023 Score=45.61 Aligned_cols=91 Identities=18% Similarity=0.094 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 013991 329 LAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIITGLFILQ 408 (432)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (432)
.++......+.. ++.+.+.+++|.|+.+.++.+...+-....... .+..++.+..+.|++.+......-.++
T Consensus 43 lai~Y~~~~~s~-l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~-------~~~~l~~~s~l~G~~~a~lW~aqg~yl 114 (156)
T PF05978_consen 43 LAILYGSFAISC-LFAPSIVNKLGPKWSMILGSLGYAIYIASFFYP-------NSYTLYPASALLGFGAALLWTAQGTYL 114 (156)
T ss_pred HHHHHHHHHHHH-HhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhh-------hHHHHHHHHHHHhhhhHHhhHhhhHHH
Confidence 344444445555 477889999999999999888776544443221 123577788888999999999999999
Q ss_pred hccccccchhhhhhHHHHH
Q 013991 409 NRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 409 ~~~~p~~~~g~~~~~~~~~ 427 (432)
.+..+++.+++-.+.+|-+
T Consensus 115 t~~s~~~~~~~~~~ifw~i 133 (156)
T PF05978_consen 115 TSYSTEETIGRNTGIFWAI 133 (156)
T ss_pred HHcCCHHHHhhHHHHHHHH
Confidence 9999999999999988865
No 267
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.07 E-value=0.12 Score=47.93 Aligned_cols=34 Identities=6% Similarity=-0.045 Sum_probs=23.1
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHhccccccchhh
Q 013991 386 LNCASVVKNLLSVSIITGLFILQNRAVVRVLTYT 419 (432)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~ 419 (432)
..+...+.++..+-.......+..+.+|++++-.
T Consensus 346 ~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~ 379 (406)
T KOG1479|consen 346 FIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEA 379 (406)
T ss_pred HHHHHHHHHhccchHhhheehhcCCCCChHHHHH
Confidence 3444555666777777788888888887766543
No 268
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.03 E-value=0.015 Score=54.17 Aligned_cols=107 Identities=17% Similarity=0.264 Sum_probs=73.2
Q ss_pred hhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHH-----HHHHHHhhhhhHHHHHHHHHHHhhhccchhh-HHh
Q 013991 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV-----IFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKA 157 (432)
Q Consensus 84 ~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~-----~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~-~~~ 157 (432)
..+....|.+|-.++.--...+ |+ |++.+.+.+-.. +....+-+.++.|.+++.-+..|+.+|...+ ...
T Consensus 283 Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~ 358 (402)
T PF02487_consen 283 YRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFY 358 (402)
T ss_pred HHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 6677777777665554322211 33 333333322222 2222333467888888888999997777666 477
Q ss_pred hhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhc
Q 013991 158 YACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (432)
Q Consensus 158 ~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (432)
.+.|-.++++|..+++..+.+-++|..++.+++-.+-
T Consensus 359 ~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 359 RISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 7788889999999999999999999999988886654
No 269
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=96.99 E-value=0.23 Score=44.52 Aligned_cols=72 Identities=15% Similarity=0.193 Sum_probs=52.0
Q ss_pred hHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhH-Hhhhhhhcc
Q 013991 92 MFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFR 164 (432)
Q Consensus 92 ~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~ 164 (432)
.+..+..+++.+.+.+++|-|+.+.++...+...... -+-+.+..++-+-...|++.+..+.. -+|+++.-.
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~-Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAA-NLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh-hcchhHHhhccHHHhhccccccccccCcceecHHHH
Confidence 3444566666668999999999999887776654322 23456788888899999998887776 666665543
No 270
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=96.98 E-value=0.004 Score=54.27 Aligned_cols=104 Identities=16% Similarity=-0.014 Sum_probs=70.1
Q ss_pred CcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHHHHHHhhHHHhhhhh-HHHHHHHHHHHHHHh
Q 013991 317 GLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGF-GLAFLLNCASVVKNL 395 (432)
Q Consensus 317 ~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 395 (432)
.+|+|.++...+-....++..++ +..|.+.|+.+++.++.++.+...++...+.......-. ...+.+.+..++.+.
T Consensus 31 ~l~~sq~~l~~l~~~~~~G~~~G--~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~ 108 (250)
T PF06813_consen 31 RLGYSQSQLNTLSTAGDIGSYFG--ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGN 108 (250)
T ss_pred HhCCCHHHHHHHHHHHHHHhhcc--HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcc
Confidence 38999999999998888888775 588999999999999999999988887666544332211 122223333334333
Q ss_pred hhhhHHHHHHHHHhccccccchhhhhhH
Q 013991 396 LSVSIITGLFILQNRAVVRVLTYTLSCH 423 (432)
Q Consensus 396 ~~~~~~~~~~~~~~~~~p~~~~g~~~~~ 423 (432)
+.............+..|+ .||++.|+
T Consensus 109 s~~~~~ta~lvt~~~NFP~-~RG~vvgi 135 (250)
T PF06813_consen 109 SSCWFNTASLVTCVRNFPR-SRGTVVGI 135 (250)
T ss_pred cHHHhhhHHHHHHHHhCcc-ccCceehh
Confidence 3333444444445567875 68987765
No 271
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.94 E-value=0.0017 Score=62.17 Aligned_cols=150 Identities=15% Similarity=0.178 Sum_probs=100.0
Q ss_pred hhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhh----------hhHHHHHHHHHHHhhhccc-h
Q 013991 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLS----------VNFWMAVLTRFLLGSLNGL-L 152 (432)
Q Consensus 84 ~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----------~~~~~l~~~r~~~G~~~g~-~ 152 (432)
.|.+..+..++..++..+...+.-++.-|+++..+.++.++..+.-..- ++.+-.+.--++..+..+. .
T Consensus 257 ~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~ 336 (433)
T PF03092_consen 257 YGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAF 336 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHH
Confidence 7888888888888999999888888888999888887776665543211 1111122222344443333 4
Q ss_pred hhHHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCccccc-ccccCccchHHHHHHHHHHHHHHH
Q 013991 153 GPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSE-SLFGKFPYFLPCLCISLFAFGVTI 231 (432)
Q Consensus 153 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~-~~~~~~~~~~~~~~~~~~~~~~~~ 231 (432)
.|...+++|+.|+...|...++.....++|..++..++..+.+. ++.. ..| .+.....++..+..++.+.
T Consensus 337 mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~-------~~vt~~~f--~~l~~lili~~~~~ll~l~ 407 (433)
T PF03092_consen 337 MPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMEL-------FGVTRDDF--SNLWLLILICSVIQLLPLP 407 (433)
T ss_pred HHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------cCCCcccc--cchHHHHHHHHHHHHHHHH
Confidence 55678899999999999999999999999999999999999883 3321 112 2222333444444455555
Q ss_pred HHhhcccccCC
Q 013991 232 AAFWLPETLHR 242 (432)
Q Consensus 232 ~~~~~~e~~~~ 242 (432)
...++|++.+.
T Consensus 408 ll~lLp~~~~~ 418 (433)
T PF03092_consen 408 LLFLLPPQKRI 418 (433)
T ss_pred HHHHcCCCchh
Confidence 55677765443
No 272
>PRK03612 spermidine synthase; Provisional
Probab=96.85 E-value=0.056 Score=53.00 Aligned_cols=122 Identities=15% Similarity=0.121 Sum_probs=71.7
Q ss_pred HHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHH---HHH-HHHh---hhhhH-HH
Q 013991 66 FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVV---IFN-TLFG---LSVNF-WM 137 (432)
Q Consensus 66 ~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~---~~~-~~~~---~~~~~-~~ 137 (432)
.+..-+|-+..+ .+.+.++++.|..+|+.+.|++.++.-|+.. .+-..+.. ++. ++.. ..... ..
T Consensus 40 ~l~~~~G~s~~~------~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~ 112 (521)
T PRK03612 40 LASYLLGDSVTQ------FSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLL 112 (521)
T ss_pred HHHHHhCchHHH------HHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444556777777 8999999999999999999988744323222 11111111 111 1111 11111 11
Q ss_pred HHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 138 AVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 138 l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
++..-++.++..|+..|. ..+..+ ...++-++..|.......+|+++|.++.+++.-
T Consensus 113 ~~~~~~~~~~l~G~~~Pl~~~~~~~-~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 113 LYVLVLLIGLLIGMEIPLLMRILQR-IRDQHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-ccccchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 223334556666666665 333333 222234667888899999999999999888764
No 273
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.73 E-value=0.019 Score=54.42 Aligned_cols=130 Identities=8% Similarity=-0.094 Sum_probs=91.2
Q ss_pred hhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhh------hh
Q 013991 60 LFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL------SV 133 (432)
Q Consensus 60 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~------~~ 133 (432)
....+..+...-|.++.. +|..-+...+....+.+...++.+|+|..|.=+++...-..+..++.. .+
T Consensus 277 f~~lmt~yl~~~G~s~~~------igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~ 350 (432)
T PF06963_consen 277 FGGLMTAYLKSQGYSPSV------IGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSP 350 (432)
T ss_pred CcHHHHHHHHHCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 455666666666999999 999999999999999999999999999988777766544433333322 11
Q ss_pred ----hHHHHHHHHHHHhhhccchhh-HHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 134 ----NFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 134 ----~~~~l~~~r~~~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
+...++.+-++.=+|-=.+-. ..-++.|..|+++||...|.-....++-.++-..++-.+-+
T Consensus 351 ~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~~ 417 (432)
T PF06963_consen 351 FSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFPR 417 (432)
T ss_pred chhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 222333333333333222333 47889999999999999999999998888877777654433
No 274
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=96.65 E-value=0.041 Score=48.58 Aligned_cols=174 Identities=14% Similarity=0.068 Sum_probs=100.8
Q ss_pred HHHHHHHHHHhhccccchhhhHHHHHHH-hc---------CCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCCh
Q 013991 43 LFSIWIIVLCTALPISSLFPFLYFMIKD-FQ---------IAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRK 112 (432)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---------~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr 112 (432)
....|+..+++.+++-++.....++..+ .+ .+..+ -...-.|.+.-+-.+...+..+.+..+.||+.--
T Consensus 14 ~~~FwllGLcNN~~YVvmLSAA~DIl~~~~~~~~~~c~~h~~~r~-c~~~stg~VLLaDilPsL~iKl~~Pff~~rfpf~ 92 (409)
T KOG3880|consen 14 AVAFWLLGLCNNYGYVVMLSAAEDILSEQVSDPGPTCIPHNSGRE-CQSVSTGAVLLADILPSLAIKLTAPFFIHRFPFG 92 (409)
T ss_pred chHHHHHHHhcccceEeehhhhhhhhccccCCCCCCccccccccc-ccccccchhhhhhhhHHHHHHHhchhhhhhcccc
Confidence 3455666777777776655555555433 22 01000 0011145555555666677777788888886654
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhhHHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhh
Q 013991 113 PVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF 192 (432)
Q Consensus 113 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 192 (432)
.=..+..++.+.+.++.+++++.++-+++-.+..++.|.-....--++..+++. .++.++.+.+.++.+|..--..
T Consensus 93 ~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~Y~~~----~i~~WSSGTGgAGliGa~SYa~ 168 (409)
T KOG3880|consen 93 FRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSRYPSI----VIAGWSSGTGGAGLIGASSYAF 168 (409)
T ss_pred hHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhccCCCc----eeccccCCCCcchhhhhhHHHH
Confidence 334455667777888888999998888887788777776555433333334332 3444555666666666655555
Q ss_pred hcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhh
Q 013991 193 LAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFW 235 (432)
Q Consensus 193 l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (432)
+.+. + ..+.+...++...+.++.....++
T Consensus 169 lT~~-------------~-~~spk~Tlli~l~lP~lfa~~yf~ 197 (409)
T KOG3880|consen 169 LTSW-------------A-NLSPKSTLLIMLFLPALFAFAYFF 197 (409)
T ss_pred Hhhh-------------c-CCChhhHHHHHHHHHHHHHHHHHh
Confidence 5541 1 445555666666555554444444
No 275
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=96.58 E-value=0.067 Score=46.30 Aligned_cols=106 Identities=12% Similarity=0.011 Sum_probs=53.6
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccccCCCCC
Q 013991 166 EHQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPETLHRHND 245 (432)
Q Consensus 166 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 245 (432)
++|+........++++|.++.-..--.-.+. +. ..+..|+..+.+.+++.++-++....+.+.-+...+
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~----------~~-~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~ 70 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSV----------VI-ALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSP 70 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchH----------HH-HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCc
Confidence 5667777777778888887765442111110 00 114457776666666665544444444221111111
Q ss_pred CCcchhhhHHHhhhhhhhhhhhhccCCCCccccccchhHHHHHHHHHHHH
Q 013991 246 DDDSCDVSYDALESASAEVKEEEGREATPKKSLLKNWPLMSSIIVYCVFS 295 (432)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (432)
+++++ .++.+.+.+....+.+|++..|.-.+.+....
T Consensus 71 ~~k~~-------------k~~~~~~~~~s~~~~LK~K~tw~w~~~Yg~wL 107 (267)
T PF07672_consen 71 KEKQE-------------KENSTLSKKPSYKSILKEKETWKWILIYGIWL 107 (267)
T ss_pred ccccc-------------cccccccccchHHHHHccchHHHHHHHHHHHh
Confidence 10000 00011223356778899998887777666544
No 276
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.57 E-value=0.038 Score=52.48 Aligned_cols=146 Identities=14% Similarity=0.247 Sum_probs=93.5
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHHHH---HhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhh---ccCChHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFMIK---DFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVAD---RYGRKPV 114 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~d---r~Grr~~ 114 (432)
++.+.+....+..+..........|.... ..+.+... +.++..-...++..+++.+.+.+++ |+||++.
T Consensus 240 ~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~-----~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~ 314 (461)
T KOG3098|consen 240 PKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTY-----LIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPT 314 (461)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchh-----HHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcc
Confidence 33444555555555555555555443321 22222211 2333344444555556666666664 5889999
Q ss_pred HHHHHHHHHHHHHHHhhh------------------hhHHHHHHHHHHHhhhccchhhH-HhhhhhhcccchhhhhhhhH
Q 013991 115 IIMGTASVVIFNTLFGLS------------------VNFWMAVLTRFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTV 175 (432)
Q Consensus 115 l~~~~~~~~~~~~~~~~~------------------~~~~~l~~~r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~ 175 (432)
+.++..+..+.+++.-.. +++....+.-++.|++.+..... +.++.+.. +++|..+.++.
T Consensus 315 ~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~ 393 (461)
T KOG3098|consen 315 VLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLF 393 (461)
T ss_pred hhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHH
Confidence 999999888888877542 24556667778999999888876 88888888 67888888888
Q ss_pred HHHHHHHHHHHHHHHhh
Q 013991 176 STAWGIGLIIGPALGGF 192 (432)
Q Consensus 176 ~~~~~~g~~~g~~~~~~ 192 (432)
..-..++..++-.....
T Consensus 394 kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 394 KFYQSVASCVAFFFSPY 410 (461)
T ss_pred HHHHHHHHHHHhhhhhh
Confidence 87777777665544433
No 277
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.52 E-value=0.093 Score=47.81 Aligned_cols=83 Identities=10% Similarity=0.009 Sum_probs=63.2
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhh
Q 013991 318 LNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLS 397 (432)
Q Consensus 318 ~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (432)
+|++..+++.++........+.+ .+.+.+.||+|||+..+...++..++++.--. .. ...++++=++.|...
T Consensus 64 yg~~~~qIa~Lf~~Gf~Ss~i~g-~~~G~laD~~Grk~~cl~~cily~~scl~k~~-~~------~~~L~~GRvlgGiaT 135 (354)
T PF05631_consen 64 YGFSEHQIAILFVAGFASSAIFG-TFVGSLADRYGRKKACLLFCILYSLSCLTKHS-SN------YPVLLLGRVLGGIAT 135 (354)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCchHHHHHHHHHHHHHHHHHhc-cc------cHHHHHHHHHHHHHH
Confidence 69999999999999888888877 58899999999999999988888888765322 11 124555656777777
Q ss_pred hhHHHHHHHHH
Q 013991 398 VSIITGLFILQ 408 (432)
Q Consensus 398 ~~~~~~~~~~~ 408 (432)
...+....+.+
T Consensus 136 SLLfS~FEsW~ 146 (354)
T PF05631_consen 136 SLLFSAFESWM 146 (354)
T ss_pred HHHHHHHHHHH
Confidence 77777666654
No 278
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=95.92 E-value=0.091 Score=37.02 Aligned_cols=73 Identities=19% Similarity=0.131 Sum_probs=58.6
Q ss_pred HhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHHHHHHhhHHHh
Q 013991 297 HDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAM 376 (432)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (432)
.-+.+...+|...++ .++|..+.|++-+...++..+|. +...++.++.++++.+..+.+...+..+.+++...
T Consensus 7 gRFayTplLP~M~~~------~~ls~~~ag~lasaNy~GYL~GA-l~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~ 79 (85)
T PF06779_consen 7 GRFAYTPLLPLMQAD------GGLSLSQAGWLASANYLGYLVGA-LLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHS 79 (85)
T ss_pred HHHHHHhHhHHHHHh------cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 344566677866665 59999999999999999999998 47788888878888888988888888777766543
No 279
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=95.80 E-value=0.015 Score=55.36 Aligned_cols=157 Identities=10% Similarity=0.146 Sum_probs=89.2
Q ss_pred CCCchhHHHHHHHHHHhhccccchhhhH-HHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhh-hccCChHH
Q 013991 37 GLPITELFSIWIIVLCTALPISSLFPFL-YFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVA-DRYGRKPV 114 (432)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~-dr~Grr~~ 114 (432)
+..+...+.+....+...+.....-... +.....++.+.++ ...+.|...++..+-.....+..+... -++.+|+.
T Consensus 258 ~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~--av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~ 335 (488)
T KOG2325|consen 258 KLDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSE--AVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRI 335 (488)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccch--HHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhcccee
Confidence 3444555555555554444443322222 3445556776665 222234444444433333333444333 34455666
Q ss_pred HHHHHHHHHHHHHHHhhh-------------------------------hhHHHHHHHH-HHHhhhccchhhH-Hhhhhh
Q 013991 115 IIMGTASVVIFNTLFGLS-------------------------------VNFWMAVLTR-FLLGSLNGLLGPI-KAYACE 161 (432)
Q Consensus 115 l~~~~~~~~~~~~~~~~~-------------------------------~~~~~l~~~r-~~~G~~~g~~~~~-~~~i~~ 161 (432)
+..+.++......+.... .+.+.+++.+ ++.|.+.-..... .++-++
T Consensus 336 ~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySk 415 (488)
T KOG2325|consen 336 ILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSK 415 (488)
T ss_pred eeehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHH
Confidence 666644444444333210 1223334443 3456655544444 888899
Q ss_pred hcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 162 IFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 162 ~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
+..|++++...+.++...+.+..+||++......
T Consensus 416 iLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~ 449 (488)
T KOG2325|consen 416 ILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFT 449 (488)
T ss_pred HhCCccccceeEEEEeccchhhhhhHHHHhhhHH
Confidence 9999999999999999999999999999888877
No 280
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=95.69 E-value=0.12 Score=49.46 Aligned_cols=109 Identities=13% Similarity=0.037 Sum_probs=73.5
Q ss_pred hhHHHHHHhHHHHHHHHhhhhhhhccCCh-HHHHHHHH---HHHHHHHHHhhh---------hhHHHHHHHHHHHhhhcc
Q 013991 84 AGYVGSSFMFGRALTSVFWGLVADRYGRK-PVIIMGTA---SVVIFNTLFGLS---------VNFWMAVLTRFLLGSLNG 150 (432)
Q Consensus 84 ~~~~~s~~~~~~~~~~~~~G~l~dr~Grr-~~l~~~~~---~~~~~~~~~~~~---------~~~~~l~~~r~~~G~~~g 150 (432)
.-.....+.++-.+|..+..+.. .-++| +.+.+..+ ++.-..++|..- ++-+..++.-++.|+..|
T Consensus 309 ~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnG 387 (437)
T TIGR00939 309 PIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNG 387 (437)
T ss_pred HHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhh
Confidence 45667777888888877554321 11222 13333333 333333344322 355667777889999999
Q ss_pred chhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhh
Q 013991 151 LLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (432)
Q Consensus 151 ~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 193 (432)
-.... ..+..+..++++|..+-.+...+..+|..+|..++-.+
T Consensus 388 y~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 388 YLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88775 88888889999999999999999999999998876544
No 281
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=95.39 E-value=0.16 Score=46.24 Aligned_cols=77 Identities=9% Similarity=-0.107 Sum_probs=53.3
Q ss_pred hhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHH
Q 013991 41 TELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA 120 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~ 120 (432)
+..+.+.++.++...+.-+.......+..+++.+.-. +.+.....-.....+..++.|...|+..|+|++...+.
T Consensus 27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~-----lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~ 101 (503)
T KOG2601|consen 27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLL-----LVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLL 101 (503)
T ss_pred ceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceeh-----hHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHh
Confidence 4455667778888887777777777777777764432 13333334455567788899999999999999876655
Q ss_pred HH
Q 013991 121 SV 122 (432)
Q Consensus 121 ~~ 122 (432)
+-
T Consensus 102 lq 103 (503)
T KOG2601|consen 102 LQ 103 (503)
T ss_pred hc
Confidence 43
No 282
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.34 E-value=0.0045 Score=60.82 Aligned_cols=148 Identities=14% Similarity=0.243 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHhhccccchhhhHH-HHHHHhcCCccccchhhhhhHHHHHHhH-HHHHHHHhhhhhhhccC--ChHHHHH
Q 013991 42 ELFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMF-GRALTSVFWGLVADRYG--RKPVIIM 117 (432)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~s~~~~-~~~~~~~~~G~l~dr~G--rr~~l~~ 117 (432)
.+....++.....+....+..+.| ++..+|+.+.++ ++++..+..+ +.++|.+++|.+..|+. .|..+..
T Consensus 306 ~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~------A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~ 379 (539)
T PF03137_consen 306 VFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQ------ASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKF 379 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------HHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHH
Confidence 344556666667777777788887 667789999988 7777766655 56788889999999876 3555544
Q ss_pred HHHHHHHHHHHHh---h--h-------------------------------------------------hhHHHHHHHHH
Q 013991 118 GTASVVIFNTLFG---L--S-------------------------------------------------VNFWMAVLTRF 143 (432)
Q Consensus 118 ~~~~~~~~~~~~~---~--~-------------------------------------------------~~~~~l~~~r~ 143 (432)
..+...++.++.. + + +.+..+++..+
T Consensus 380 ~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~ 459 (539)
T PF03137_consen 380 CIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLF 459 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHH
Confidence 4444444333310 0 0 01112222222
Q ss_pred HHhhhccc-hhhHHhhhhhhcccchhhhhhhhHHHHHH-HHHHHHHHHHhhhcc
Q 013991 144 LLGSLNGL-LGPIKAYACEIFREEHQALGLSTVSTAWG-IGLIIGPALGGFLAQ 195 (432)
Q Consensus 144 ~~G~~~g~-~~~~~~~i~~~~~~~~r~~~~~~~~~~~~-~g~~~g~~~~~~l~~ 195 (432)
+.-+..+. ..|....+-+.+|+++|+.++|+...... +|.+-||++-|.+.|
T Consensus 460 ~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD 513 (539)
T PF03137_consen 460 ILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIID 513 (539)
T ss_dssp ------------------------------------------------------
T ss_pred HHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHh
Confidence 22222223 33445566688999999999999865554 588899999999988
No 283
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.09 E-value=0.59 Score=43.90 Aligned_cols=98 Identities=17% Similarity=0.164 Sum_probs=70.9
Q ss_pred chhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHH--HHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhh-H
Q 013991 79 DIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII--MGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-I 155 (432)
Q Consensus 79 ~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~--~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~-~ 155 (432)
+...+.|.+-++..+...++++..|++..++.+-.-+. ...++.+...++++..+|.|..+++.++.+...-...+ +
T Consensus 282 ~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA 361 (412)
T PF01770_consen 282 NESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIA 361 (412)
T ss_pred CCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566899999999999999999999988888754444 33455566667778889999999998887765444444 4
Q ss_pred HhhhhhhcccchhhhhhhhHH
Q 013991 156 KAYACEIFREEHQALGLSTVS 176 (432)
Q Consensus 156 ~~~i~~~~~~~~r~~~~~~~~ 176 (432)
..-++....++.-+..+|+..
T Consensus 362 ~~qIA~~l~~e~yaLVFGiNt 382 (412)
T PF01770_consen 362 SFQIAKNLSEERYALVFGINT 382 (412)
T ss_pred HHHHHHhccccceeeeeeeHH
Confidence 555666666666676666643
No 284
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=94.63 E-value=0.01 Score=50.82 Aligned_cols=64 Identities=8% Similarity=0.030 Sum_probs=42.7
Q ss_pred CCCccccccchhHHHHHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHH
Q 013991 272 ATPKKSLLKNWPLMSSIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQ 340 (432)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~ 340 (432)
+.+|...+++-.+....+.+.+.-.....-..+++.|..++ ++++.....++-.+..+.....+
T Consensus 191 Rm~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfvidd-----lqm~qsakAllP~v~Yl~SF~VS 254 (412)
T KOG4830|consen 191 RMHWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDD-----LQMEQSAKALLPMVAYLSSFSVS 254 (412)
T ss_pred cccchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeeh-----hhHHHHHhhhhHHHHHHhhhhHH
Confidence 35677777777777777777777666666666777666665 56666666666666666555544
No 285
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=94.50 E-value=0.21 Score=50.44 Aligned_cols=112 Identities=10% Similarity=-0.022 Sum_probs=74.8
Q ss_pred hHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHH-hChhHHHHHHHHHHHHHHHHhhHHHhhh
Q 013991 300 AYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI-LGPIMVARIAGVLTIPLLTSYPYIAMLS 378 (432)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (432)
+....+..|+... +|++...+..+........-+.. .+++++.|+ +|+++.+.++.++..++..++.......
T Consensus 5 Gm~aiLvlYl~~~-----lg~~~~~A~~i~~~f~~l~yl~p-ilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~ 78 (654)
T TIGR00926 5 GMRTILVLYFLNF-----LGFSESTSTVLFHTFTYLCYLTP-LIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPS 78 (654)
T ss_pred ecHHHHHHHHHHH-----cCCcHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcc
Confidence 3444555565554 68888777777666665555555 477777775 6999999999888888877766532211
Q ss_pred h--hHHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccch
Q 013991 379 G--FGLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLT 417 (432)
Q Consensus 379 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 417 (432)
. .......+++..+...+.++.-|+..+...+..+++++
T Consensus 79 ~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~ 119 (654)
T TIGR00926 79 SGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQL 119 (654)
T ss_pred cccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccch
Confidence 0 11223345666677778888889999999998876543
No 286
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=93.96 E-value=0.018 Score=52.49 Aligned_cols=107 Identities=20% Similarity=0.130 Sum_probs=2.2
Q ss_pred HHHHHHhHHHHHHHHhhhhhhhcc-CChHHHHH--HHHHHHHHHHHHh----------hhhhHHHHHHHHHHHhhhccch
Q 013991 86 YVGSSFMFGRALTSVFWGLVADRY-GRKPVIIM--GTASVVIFNTLFG----------LSVNFWMAVLTRFLLGSLNGLL 152 (432)
Q Consensus 86 ~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~--~~~~~~~~~~~~~----------~~~~~~~l~~~r~~~G~~~g~~ 152 (432)
.....+.++-.+|....++.-=+- .+|++... .-+++.-..++|. ..+|-+..++.-++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 356678888888888777632110 24444332 2222222223331 1234456677778899999988
Q ss_pred hhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhh
Q 013991 153 GPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF 192 (432)
Q Consensus 153 ~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 192 (432)
... ..+..+..++++|..+-.+...+..+|..+|..++-.
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp -HHHH------------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 775 8888999999999999888888888888888777643
No 287
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=92.59 E-value=2.5 Score=37.61 Aligned_cols=99 Identities=12% Similarity=-0.113 Sum_probs=63.6
Q ss_pred chhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHHHHHHhhHHHhhhhhHHHHHHHHHHHHHHhhhhhHHH
Q 013991 323 QMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSGFGLAFLLNCASVVKNLLSVSIIT 402 (432)
Q Consensus 323 ~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (432)
...+.......+...++. +..+.+.||.|+|+....+......+.+...+... .....+.+.....+...+...+
T Consensus 39 ~~~~~~~~~~~~~~~~~~-~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~ 113 (338)
T COG0477 39 LLYGLLLSAFFLGYAIGS-LLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPN----VGLALLLILRLLQGLGGGGLLP 113 (338)
T ss_pred HHHHHHHHHHHHHHHHHh-hhhhhccccccchHHHHHHHHHHHHHHHHHHhCcc----chHHHHHHHHHHHHhhhHHHHH
Confidence 467778888888888877 68899999998887766666543333233332222 1111233333335666677888
Q ss_pred HHHHHHhccccc-cchhhhhhHHHH
Q 013991 403 GLFILQNRAVVR-VLTYTLSCHFWF 426 (432)
Q Consensus 403 ~~~~~~~~~~p~-~~~g~~~~~~~~ 426 (432)
....+..+..|+ +.|+...+....
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (338)
T COG0477 114 VASALLSEWFPEATERGLAVGLVTL 138 (338)
T ss_pred HHHHHHHHhcCchhHHHHHHHHHHH
Confidence 999999999998 566766665544
No 288
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=91.59 E-value=0.48 Score=44.64 Aligned_cols=133 Identities=12% Similarity=-0.038 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHH----hChhHHHH-HHH
Q 013991 287 SIIVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI----LGPIMVAR-IAG 361 (432)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~-~~~ 361 (432)
.....+...+....-.++.+.|.++ +|.+....+.+....-+.+.+.+ ++.|..+|| +||||..+ .+.
T Consensus 37 v~~ia~Gvqf~wA~elsy~tPyl~~------lGvphk~~S~iw~~gPi~G~~vQ-P~vG~~SDrc~sr~GRRRPfI~~~s 109 (498)
T KOG0637|consen 37 VASIAAGVQFGWALELSYLTPYLQS------LGVPHKWSSIIWLCGPLSGLLVQ-PLVGSASDRCTSRYGRRRPFILAGS 109 (498)
T ss_pred HHHHHHHHHHHHHHHhccccHHHHH------cCCCcccccccccccccccceec-ccccccccccccccccccchHHHhh
Confidence 3334444444444555566666665 58888888888888888888887 688888886 57766544 445
Q ss_pred HHHHHHHHHhhHHHhhhhh-----------HHHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhh-hhhHHHH
Q 013991 362 VLTIPLLTSYPYIAMLSGF-----------GLAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYT-LSCHFWF 426 (432)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~-~~~~~~~ 426 (432)
....++++++++....... .......+...+.=+..........++..+...++++-+ +++.+-+
T Consensus 110 ~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~ 186 (498)
T KOG0637|consen 110 LLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSF 186 (498)
T ss_pred HHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHH
Confidence 5556667777766543311 122333444445555565666777888888876666555 6665544
No 289
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=90.34 E-value=4.8 Score=37.71 Aligned_cols=109 Identities=19% Similarity=0.114 Sum_probs=75.8
Q ss_pred hhhhHHHHH-HhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhh---------hhhHHHHHHHHHHHhhhccc
Q 013991 82 SYAGYVGSS-FMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL---------SVNFWMAVLTRFLLGSLNGL 151 (432)
Q Consensus 82 ~~~~~~~s~-~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~---------~~~~~~l~~~r~~~G~~~g~ 151 (432)
++.-+.... +.+.-.+|.+...++-++= ||. +.+..++-.+..-++.+ -.+-++++..-.+.|+..|-
T Consensus 282 ~y~~~~~~l~fN~~d~vG~~~a~~~~~~~-~r~-l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGY 359 (406)
T KOG1479|consen 282 WYALLLVFLSFNVFDLIGSILAALLTWPD-PRK-LTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGY 359 (406)
T ss_pred hhHHHHHHHHhHHHHHhhhhhhhcccCCC-Cce-ehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccch
Confidence 335566666 8888888877777766553 333 33333333333333332 34557777888899999998
Q ss_pred hhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhh
Q 013991 152 LGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGF 192 (432)
Q Consensus 152 ~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 192 (432)
...+ +.+..+..+++++-.+-.+.......|...|..++..
T Consensus 360 ltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~l 401 (406)
T KOG1479|consen 360 LTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSWV 401 (406)
T ss_pred HhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 8776 8899999999998888888888888888888777644
No 290
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=89.04 E-value=0.15 Score=46.51 Aligned_cols=38 Identities=5% Similarity=-0.109 Sum_probs=3.3
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhH
Q 013991 386 LNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCH 423 (432)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~ 423 (432)
.++...+.++..+-..........+.+++++|-.+..+
T Consensus 251 ~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~ 288 (309)
T PF01733_consen 251 FIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSV 288 (309)
T ss_dssp ----------------HHHH------------------
T ss_pred HHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHH
Confidence 34445566667777777888888888887777555443
No 291
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=88.75 E-value=21 Score=34.66 Aligned_cols=102 Identities=9% Similarity=0.063 Sum_probs=63.6
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHHHHHHhhHHHhhhh---------------------
Q 013991 321 STQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLTSYPYIAMLSG--------------------- 379 (432)
Q Consensus 321 s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 379 (432)
+++....+.....+.+.+.-.++..++++|++++++..+........+.++++......
T Consensus 41 gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~ 120 (472)
T TIGR00769 41 GAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFM 120 (472)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhH
Confidence 44667777776666666553367899999999999887766666665555554422110
Q ss_pred -------hHHHHHHHHHHHHHHhhhhhHHH-HHHHHHhccccccchhhhhhHHH
Q 013991 380 -------FGLAFLLNCASVVKNLLSVSIIT-GLFILQNRAVVRVLTYTLSCHFW 425 (432)
Q Consensus 380 -------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~g~~~~~~~ 425 (432)
.+....+++.. -..+....+ ..+.+++|....++..+.++.+.
T Consensus 121 ~~i~~~~~W~~~~FYv~~---elw~~~vvS~lFW~fandi~t~~qakRfy~l~~ 171 (472)
T TIGR00769 121 GFIAILRIWSFALFYVMA---ELWGSVVLSLLFWGFANQITTIDEAKRFYALFG 171 (472)
T ss_pred HHHHHHhhhhHHHHHHHH---HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 11112222222 224444454 78899999998888777776654
No 292
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=88.08 E-value=6.7 Score=34.30 Aligned_cols=103 Identities=19% Similarity=0.190 Sum_probs=55.8
Q ss_pred hhHHHHHHhHHHHHHHHhhhhhhhc-cCChHHHH----HHHHHHHHHHHHHhh-----hhhHHHHHHHHHHHhhhccchh
Q 013991 84 AGYVGSSFMFGRALTSVFWGLVADR-YGRKPVII----MGTASVVIFNTLFGL-----SVNFWMAVLTRFLLGSLNGLLG 153 (432)
Q Consensus 84 ~~~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~----~~~~~~~~~~~~~~~-----~~~~~~l~~~r~~~G~~~g~~~ 153 (432)
......++..+..+|....|.+... +.||+.+. .+.+...++.+.... ..+...+++.-++.|++.=...
T Consensus 143 ~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ 222 (267)
T PF07672_consen 143 IPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQ 222 (267)
T ss_pred hHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhh
Confidence 4556666777777888888888764 55665543 233444444333211 1135567777778877532334
Q ss_pred hHHhhhhhhcccchhhhhhhhHHHHHHHHHHHH
Q 013991 154 PIKAYACEIFREEHQALGLSTVSTAWGIGLIIG 186 (432)
Q Consensus 154 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 186 (432)
++.-.+..-++..++.+.--.++..+++|-++-
T Consensus 223 ~ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY~~y 255 (267)
T PF07672_consen 223 GVILNLPHEYKGYNPKKIGIQFGLIWGFGYIFY 255 (267)
T ss_pred HHHhcChhhhcCCCcceehhHHHHHHHHHHHHH
Confidence 444444444444444444334455666665543
No 293
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=82.65 E-value=6.9 Score=35.19 Aligned_cols=75 Identities=15% Similarity=0.188 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhh-HHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhh
Q 013991 119 TASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (432)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~-~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 193 (432)
.+++.+...+..+.+++|..++.-+..|+-+|...+ ..--+.+-.++++|-.+++....+-++|..++..++-.+
T Consensus 326 Nl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 326 NLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 344555566667788999888888899996555554 455566667889999999999998888888877766443
No 294
>PRK03612 spermidine synthase; Provisional
Probab=82.29 E-value=55 Score=32.42 Aligned_cols=56 Identities=20% Similarity=0.168 Sum_probs=33.3
Q ss_pred HHHHHHHHHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHH
Q 013991 289 IVYCVFSLHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (432)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 350 (432)
...++..++...+...+.-.+... +|-+....+.+.+.+-.+..+|+ .+++++.++
T Consensus 21 ~~~f~sg~~~L~yEv~~~r~l~~~-----~G~s~~~~~~ii~~fl~glalGs-~l~~~~~~~ 76 (521)
T PRK03612 21 AAVFVCAACGLVYELLLGTLASYL-----LGDSVTQFSTVIGLMLFAMGVGA-LLSKYLLRD 76 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-----hCchHHHHHHHHHHHHHHHHHHH-HHHHhhhhh
Confidence 333444555555555544444333 56677777888888777777777 356665533
No 295
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=79.40 E-value=33 Score=30.39 Aligned_cols=98 Identities=16% Similarity=0.128 Sum_probs=65.4
Q ss_pred hhHHHHHHhHHHHHHHHhhhhhhhccCCh--HHHHHHHHHHHHHHHHHhhh----h---hHHHHHHHHHHHhhhccchhh
Q 013991 84 AGYVGSSFMFGRALTSVFWGLVADRYGRK--PVIIMGTASVVIFNTLFGLS----V---NFWMAVLTRFLLGSLNGLLGP 154 (432)
Q Consensus 84 ~~~~~s~~~~~~~~~~~~~G~l~dr~Grr--~~l~~~~~~~~~~~~~~~~~----~---~~~~l~~~r~~~G~~~g~~~~ 154 (432)
-|.+.+.++++.++|+-+..++..|-..| +.+.+..+...+...+.... + +...=+++..+.-.+.|.++|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 79999999999999999998888775543 45555555544444333221 1 111123344444456677888
Q ss_pred H-HhhhhhhcccchhhhhhhhHHHHHHH
Q 013991 155 I-KAYACEIFREEHQALGLSTVSTAWGI 181 (432)
Q Consensus 155 ~-~~~i~~~~~~~~r~~~~~~~~~~~~~ 181 (432)
. +-+=+...|++.|...+..+..-.++
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLni 391 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNI 391 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhH
Confidence 6 77778889999999998887665554
No 296
>PRK11469 hypothetical protein; Provisional
Probab=78.07 E-value=39 Score=28.16 Aligned_cols=51 Identities=10% Similarity=-0.000 Sum_probs=28.4
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHhHHHHHHHhChhHHHHHHHHHHHHHHH
Q 013991 319 NYSTQMVGEVLAITGFSLLVFQLSLYPFLERILGPIMVARIAGVLTIPLLT 369 (432)
Q Consensus 319 g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 369 (432)
|.+.........+...........++.++.++++++....-+.++..+++-
T Consensus 130 g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~ 180 (188)
T PRK11469 130 QVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQ 180 (188)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444545444444445667777777776666556555555543
No 297
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=76.99 E-value=48 Score=29.10 Aligned_cols=19 Identities=5% Similarity=-0.085 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHHHhhccc
Q 013991 220 LCISLFAFGVTIAAFWLPE 238 (432)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~e 238 (432)
++..++.++......+++.
T Consensus 119 ~~G~~l~~~~~~~f~fik~ 137 (254)
T PF07857_consen 119 YIGVALVLVSGIIFSFIKS 137 (254)
T ss_pred HHHHHHHHHHHHheeeecC
Confidence 3333444444444444443
No 298
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=70.51 E-value=39 Score=32.86 Aligned_cols=54 Identities=11% Similarity=0.047 Sum_probs=40.6
Q ss_pred HHHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 142 RFLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 142 r~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
.++.-+..-...++ .++-+.+.+|..=|+.|.+.+...++|+---..+.-++.+
T Consensus 412 ~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD 466 (544)
T PF13000_consen 412 HVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVD 466 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhh
Confidence 34455554455554 8899999999999999999999999987766666655555
No 299
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=69.69 E-value=6.4 Score=40.01 Aligned_cols=76 Identities=16% Similarity=0.253 Sum_probs=52.8
Q ss_pred HHHHHHHHHHhhccccchhhhHH-HHHHHhcCCccccchhhhhhHHHHHHhHH-HHHHHHhhhhhhhccCC--hHHHHHH
Q 013991 43 LFSIWIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFG-RALTSVFWGLVADRYGR--KPVIIMG 118 (432)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~s~~~~~-~~~~~~~~G~l~dr~Gr--r~~l~~~ 118 (432)
+....++..+.......+..++| ++.++||.+... +..+.+...+. .++|..+.|.+..|+-- |.+..+.
T Consensus 394 f~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~------An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~ 467 (735)
T KOG3626|consen 394 FMLVVLASVIESLAITGYITFLPKYLETQFGISASL------ANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFV 467 (735)
T ss_pred HHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHH------HHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHH
Confidence 44556667777777777888888 667789999988 88888665554 46677889999998753 4444444
Q ss_pred HHHHHH
Q 013991 119 TASVVI 124 (432)
Q Consensus 119 ~~~~~~ 124 (432)
++...+
T Consensus 468 ~~~~~l 473 (735)
T KOG3626|consen 468 IVCSVL 473 (735)
T ss_pred HHHHHH
Confidence 443333
No 300
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=67.25 E-value=51 Score=30.51 Aligned_cols=112 Identities=14% Similarity=0.146 Sum_probs=75.5
Q ss_pred hhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHH--HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhhhccchhh-HHh
Q 013991 81 GSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVI--IMGTASVVIFNTLFGLSVNFWMAVLTRFLLGSLNGLLGP-IKA 157 (432)
Q Consensus 81 ~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l--~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~g~~~~-~~~ 157 (432)
..+-|..-++..+..+++.+..|.+--++.|..-+ .++.+.-+...++++-+++.|..+++.++.+.--....+ +..
T Consensus 270 ~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~ 349 (433)
T KOG3810|consen 270 NVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATF 349 (433)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHH
Confidence 45578888888888899999999999888886443 344444455555666678888888888777665555444 466
Q ss_pred hhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 158 YACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 158 ~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
-+++...++.-|..+|+... ++.++-.++.-...+
T Consensus 350 ~iA~nL~~e~~gLvFGiNTF---vAl~lQsilT~iVvd 384 (433)
T KOG3810|consen 350 QIARNLSSELFGLVFGINTF---VALILQSILTLIVVD 384 (433)
T ss_pred HHHHhhhhhhheeeeehHHH---HHHHHHHhheEEEEc
Confidence 66776777777777766533 334445555544554
No 301
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=65.87 E-value=77 Score=31.79 Aligned_cols=112 Identities=16% Similarity=0.078 Sum_probs=71.2
Q ss_pred HHhhhHHHHHHhhhcCCCcCCCcccccchhhHHHHHHHHHHHHHHHHhHHHHHHH-hChhHHHHHHHHHHHHHHHHhhHH
Q 013991 296 LHDMAYSEIFSLWANSPKKLGGLNYSTQMVGEVLAITGFSLLVFQLSLYPFLERI-LGPIMVARIAGVLTIPLLTSYPYI 374 (432)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 374 (432)
....+...-+-.|+... ++.+...+.-............. ..+++++|- .||-+.+.++.++...++.++...
T Consensus 51 ~a~~g~~~nlv~ylt~~-----~~~~~~~aa~~v~~f~G~~~~~~-l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~ 124 (571)
T KOG1237|consen 51 LAFFGLVSNLVTYLTLE-----LHASGGGAANNVNAFGGTQFLLP-LLGAFLADSFLGRYFTINIGSLISLLGLFGLTLS 124 (571)
T ss_pred HhHhcchhHHHHHHHHH-----hccchHHHHHHHHHHhhHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333334444555554 55565555555555444444444 578888886 477788888888887776666554
Q ss_pred Hhhh-------------------hhHHHHHHHHHHHHHHhhhhhHHHHHHHHHhcccc
Q 013991 375 AMLS-------------------GFGLAFLLNCASVVKNLLSVSIITGLFILQNRAVV 413 (432)
Q Consensus 375 ~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 413 (432)
...+ +.....+++........+.++.-|+..+.-++..+
T Consensus 125 a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd 182 (571)
T KOG1237|consen 125 AMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFD 182 (571)
T ss_pred HHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccC
Confidence 3332 11234466666677777888888999999999888
No 302
>PTZ00101 rhomboid-1 protease; Provisional
Probab=61.66 E-value=94 Score=27.77 Aligned_cols=37 Identities=22% Similarity=0.238 Sum_probs=21.4
Q ss_pred HHHHHHHHhhhhhhh-ccCChHHHHHHHHHHHHHHHHH
Q 013991 93 FGRALTSVFWGLVAD-RYGRKPVIIMGTASVVIFNTLF 129 (432)
Q Consensus 93 ~~~~~~~~~~G~l~d-r~Grr~~l~~~~~~~~~~~~~~ 129 (432)
+..+......|...+ .+|+++..++=.+....+.++.
T Consensus 119 l~Nm~~l~~~G~~lE~~~G~~r~~ilYl~sGi~G~l~s 156 (278)
T PTZ00101 119 FFNVFFQLRMGFTLEKNYGIVKIIILYFLTGIYGNILS 156 (278)
T ss_pred HHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHHHHHH
Confidence 444555556666555 5999888755444444444443
No 303
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=59.06 E-value=30 Score=32.38 Aligned_cols=54 Identities=11% Similarity=-0.023 Sum_probs=42.0
Q ss_pred HHHHhhhccc-hhhHHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 142 RFLLGSLNGL-LGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 142 r~~~G~~~g~-~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
..+.+...-. +...++..+.+.+|..-|+.|.+.+...++|.-.-..+...+++
T Consensus 376 y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D 430 (510)
T KOG3574|consen 376 YAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLAD 430 (510)
T ss_pred HHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcc
Confidence 4444443333 33458899999999999999999999999998887778878877
No 304
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=55.05 E-value=1.6e+02 Score=26.48 Aligned_cols=57 Identities=25% Similarity=0.337 Sum_probs=37.7
Q ss_pred HHHHHHHHhhhccchhhHHhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhhc
Q 013991 138 AVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFLA 194 (432)
Q Consensus 138 l~~~r~~~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 194 (432)
.-..|.+.|+-.-.+.|.++++.-.+|++++-...--...+.+++.++-|++|-.+.
T Consensus 22 ~~~lr~~~g~~~vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~ 78 (287)
T PF07760_consen 22 IPPLRVILGFPFVLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLN 78 (287)
T ss_pred hhHHHHHHHHHHHHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788888766666778999999999665544444444455555666666665554
No 305
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=54.99 E-value=63 Score=31.01 Aligned_cols=80 Identities=14% Similarity=0.226 Sum_probs=51.9
Q ss_pred CCCchhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHH
Q 013991 37 GLPITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVII 116 (432)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~ 116 (432)
+.+..+...+.+-.++..++..+..|. .+..+++++.++ ...+.+.-.+...++.++--....+.|-|-...
T Consensus 12 ~~~~~~~~~lglQH~lamfg~~V~VPl--ivg~a~~l~~~~------~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~ 83 (451)
T COG2233 12 RLPLGKLLLLGLQHLLAMFGATVLVPL--LVGLALGLSAED------TAYLISADLLASGIGTLLQLLGTGPGGSGLPSY 83 (451)
T ss_pred cCChHHHHHHHHHHHHHHHhcchHhhH--HhccCCCCCHHH------HHHHHHHHHHHHHHHHHHHHhhccCcccCCCee
Confidence 345556666677677777666555443 345678999888 899999998888888887766444455554444
Q ss_pred HHHHHHHH
Q 013991 117 MGTASVVI 124 (432)
Q Consensus 117 ~~~~~~~~ 124 (432)
.+.-...+
T Consensus 84 lG~sFafi 91 (451)
T COG2233 84 LGSSFAFV 91 (451)
T ss_pred EechHHHH
Confidence 34333333
No 306
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=54.06 E-value=43 Score=24.69 Aligned_cols=31 Identities=23% Similarity=0.292 Sum_probs=20.2
Q ss_pred HHHHHHhHHHHHHHHhhhhhhhcc-CChHHHH
Q 013991 86 YVGSSFMFGRALTSVFWGLVADRY-GRKPVII 116 (432)
Q Consensus 86 ~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~ 116 (432)
+-.+.-+++.++.....||+.||| |.++..+
T Consensus 46 ~klssefIsGilVGa~iG~llD~~agTsPwgl 77 (116)
T COG5336 46 FKLSSEFISGILVGAGIGWLLDKFAGTSPWGL 77 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHH
Confidence 344555666677778889999996 3444433
No 307
>TIGR00267 conserved hypothetical protein TIGR00267. This family is represented in three of the first four completed archaeal genomes, with two members in A. fulgidus.
Probab=52.02 E-value=49 Score=27.03 Aligned_cols=31 Identities=23% Similarity=0.304 Sum_probs=17.0
Q ss_pred HHHHHHhhhhhhhccCChHHHHHHHHHHHHH
Q 013991 95 RALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (432)
Q Consensus 95 ~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 125 (432)
..+.-.+.|.+.-|++.++...-+.=...++
T Consensus 126 ~~~~L~ilG~~~a~~s~~~~~~s~lr~~~~G 156 (169)
T TIGR00267 126 TLIALLVLGVYLGRISRENILISSLKMVVIG 156 (169)
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 3445556777777777666654443333333
No 308
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=50.24 E-value=47 Score=26.49 Aligned_cols=50 Identities=16% Similarity=0.162 Sum_probs=33.3
Q ss_pred hHHHHHHHHHHHhhhccchhhHHhhhhhhcccchhhhhhhhHHHHHHHHHHH
Q 013991 134 NFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQALGLSTVSTAWGIGLII 185 (432)
Q Consensus 134 ~~~~l~~~r~~~G~~~g~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 185 (432)
++..++..-.+.|+ |.....+.+++..+++++.|..+|+-.+-.+++-+.
T Consensus 96 ~~~~~~~S~~~Fg~--gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 96 PWAVLLVSLVFFGL--GLLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred chHHHHHHHHHHHH--HHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 34444444444444 344455777888888888999999988887776554
No 309
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=46.96 E-value=1.8e+02 Score=24.60 Aligned_cols=25 Identities=20% Similarity=0.223 Sum_probs=15.2
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 171 GLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 171 ~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
.-.......-++..+|..+++.+.+
T Consensus 163 ~~~~~~~~~i~~f~~Ga~~ga~l~~ 187 (209)
T PF06912_consen 163 RRALRYLLIILSFFIGAILGALLYR 187 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334455555666677777777765
No 310
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=46.71 E-value=1.1e+02 Score=24.54 Aligned_cols=43 Identities=9% Similarity=-0.106 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHHHHH
Q 013991 382 LAFLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHFWFV 427 (432)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~~~~ 427 (432)
.|+.++...++ +..+...+.|-+++..=++++.|+..|.=.+-
T Consensus 96 ~~~~~~~S~~~---Fg~gllGisYGilSaSWD~~r~GSllG~~e~~ 138 (153)
T PF11947_consen 96 PWAVLLVSLVF---FGLGLLGISYGILSASWDPEREGSLLGWEEFK 138 (153)
T ss_pred chHHHHHHHHH---HHHHHHhhhhhhcccccCCCCCCCcccHHHHH
Confidence 45555555544 45555667788888888888889888765443
No 311
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=46.33 E-value=79 Score=26.20 Aligned_cols=24 Identities=17% Similarity=0.517 Sum_probs=20.9
Q ss_pred HHHHhHHHHHHHHhhhhhhhccCC
Q 013991 88 GSSFMFGRALTSVFWGLVADRYGR 111 (432)
Q Consensus 88 ~s~~~~~~~~~~~~~G~l~dr~Gr 111 (432)
+.-|.+++.+.+.+.|++.||..+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 466788889999999999999885
No 312
>PRK09664 tryptophan permease TnaB; Provisional
Probab=45.40 E-value=2.8e+02 Score=26.52 Aligned_cols=41 Identities=7% Similarity=0.071 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHhccccccchhhhhhHH
Q 013991 384 FLLNCASVVKNLLSVSIITGLFILQNRAVVRVLTYTLSCHF 424 (432)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~~ 424 (432)
....+..++..++.....|....+..+..++.++.-..|..
T Consensus 195 i~~alPVl~~SFgfh~iIPsl~~y~~~d~~~~~kaIl~Gs~ 235 (415)
T PRK09664 195 IFMALPVCLASFGFHGNIPSLIICYGKRKDKLIKSVVFGSL 235 (415)
T ss_pred HHHHHHHHHHhhhCCCcchHHHHHhCccHHHHHHHHHHHHH
Confidence 34445555666677777787777765444444444444443
No 313
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=43.61 E-value=55 Score=24.14 Aligned_cols=48 Identities=17% Similarity=0.179 Sum_probs=39.0
Q ss_pred hhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhh
Q 013991 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL 131 (432)
Q Consensus 84 ~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 131 (432)
.|-..++|.-.+++.++.+++..|+.-+-+-=.++..+..++.....+
T Consensus 56 fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 56 FGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred chhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 788999999999999999999999988877767777666666554433
No 314
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=41.09 E-value=1.2e+02 Score=24.16 Aligned_cols=26 Identities=27% Similarity=0.578 Sum_probs=21.6
Q ss_pred HHHHhHHHHHHHHhhhhhhhccCChH
Q 013991 88 GSSFMFGRALTSVFWGLVADRYGRKP 113 (432)
Q Consensus 88 ~s~~~~~~~~~~~~~G~l~dr~Grr~ 113 (432)
+.-|.+++.+.+.+.|++.+|..+++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccc
Confidence 45577888899999999999988864
No 315
>PRK02237 hypothetical protein; Provisional
Probab=40.52 E-value=1.3e+02 Score=22.26 Aligned_cols=48 Identities=17% Similarity=0.083 Sum_probs=38.1
Q ss_pred hhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhh
Q 013991 84 AGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGL 131 (432)
Q Consensus 84 ~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 131 (432)
.|-+.++|.-.+++.++.+++..|+.-+-+-=.++..+..++..+..+
T Consensus 58 ~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 58 FGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 788899999999999999999999988766666676666666544433
No 316
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=40.51 E-value=1.4e+02 Score=26.13 Aligned_cols=24 Identities=25% Similarity=0.216 Sum_probs=16.2
Q ss_pred hHHHHHHHhChhHHHHHHHHHHHH
Q 013991 343 LYPFLERILGPIMVARIAGVLTIP 366 (432)
Q Consensus 343 ~~~~l~~~~~~~~~~~~~~~~~~~ 366 (432)
-+..++.|+..|++..++.+++.+
T Consensus 259 gGk~lAskIS~rtVt~~ggi~Fi~ 282 (294)
T KOG2881|consen 259 GGKYLASKISVRTVTLIGGILFII 282 (294)
T ss_pred hhHHHhhhheeEEEEEecchhHHH
Confidence 455678888888777766655444
No 317
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=39.51 E-value=1.5e+02 Score=21.76 Aligned_cols=19 Identities=11% Similarity=0.099 Sum_probs=12.3
Q ss_pred HhHHHHHHHhChhHHHHHH
Q 013991 342 SLYPFLERILGPIMVARIA 360 (432)
Q Consensus 342 ~~~~~l~~~~~~~~~~~~~ 360 (432)
+++.|+.++++......+.
T Consensus 61 ~lG~WLD~~~~t~~~~tl~ 79 (100)
T TIGR02230 61 AVGIWLDRHYPSPFSWTLT 79 (100)
T ss_pred HHHHHHHhhcCCCcHHHHH
Confidence 5777888888765544333
No 318
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=39.32 E-value=99 Score=19.50 Aligned_cols=35 Identities=20% Similarity=0.255 Sum_probs=20.8
Q ss_pred HHHhHHHHHHHHhhhhhhhc-cCChHHHHHHHHHHH
Q 013991 89 SSFMFGRALTSVFWGLVADR-YGRKPVIIMGTASVV 123 (432)
Q Consensus 89 s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~ 123 (432)
....++.++.....|+..|+ +|.++...+..++.+
T Consensus 7 g~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG 42 (55)
T PF09527_consen 7 GFTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLG 42 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 34455556667777877775 677565554444333
No 319
>COG1971 Predicted membrane protein [Function unknown]
Probab=39.11 E-value=2.3e+02 Score=23.63 Aligned_cols=27 Identities=15% Similarity=-0.100 Sum_probs=15.7
Q ss_pred HhHHHHHHHhChhHHHHHHHHHHHHHH
Q 013991 342 SLYPFLERILGPIMVARIAGVLTIPLL 368 (432)
Q Consensus 342 ~~~~~l~~~~~~~~~~~~~~~~~~~~~ 368 (432)
.++.++...++.+..+..+.++..++.
T Consensus 155 ~IG~~~g~~~g~~ae~lgGiiLI~~G~ 181 (190)
T COG1971 155 IIGRKLGKFLGKYAEILGGIILIGIGV 181 (190)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 455566666666666666655544443
No 320
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=37.76 E-value=1.5e+02 Score=27.70 Aligned_cols=85 Identities=11% Similarity=0.142 Sum_probs=57.8
Q ss_pred HHHHHHhhccccchhhhHH-HHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHH
Q 013991 47 WIIVLCTALPISSLFPFLY-FMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIF 125 (432)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 125 (432)
.++..+...+.+.+-|..+ ...+++..++ +++......+......+|..++..+.+++-|++|....+.++.+...++
T Consensus 37 ~~gL~lia~G~G~~K~ni~~~~~dq~~~~~-~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~ 115 (372)
T PF00854_consen 37 YIGLALIAVGTGGIKPNISPFGADQYDEDD-DSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLA 115 (372)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHCSSTTT-TTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccccccccHHHHHHHHhcccc-hhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHH
Confidence 3344445566666666665 4455565442 3344455667778888888888889999999999988888888877777
Q ss_pred HHHHhhh
Q 013991 126 NTLFGLS 132 (432)
Q Consensus 126 ~~~~~~~ 132 (432)
.+.+...
T Consensus 116 ~~~f~~~ 122 (372)
T PF00854_consen 116 LIVFLSG 122 (372)
T ss_dssp HHHHHCC
T ss_pred HHHHHhC
Confidence 7666554
No 321
>COG3559 TnrB3 Putative exporter of polyketide antibiotics [Cell envelope biogenesis, outer membrane]
Probab=37.02 E-value=3.8e+02 Score=25.64 Aligned_cols=23 Identities=0% Similarity=-0.112 Sum_probs=12.7
Q ss_pred ccccchhhHHHHHHHHHHHHHHH
Q 013991 319 NYSTQMVGEVLAITGFSLLVFQL 341 (432)
Q Consensus 319 g~s~~~~g~~~~~~~~~~~~~~~ 341 (432)
+....+.+++...+.+.+++.+.
T Consensus 340 ~ag~le~~Flv~lfsIisil~a~ 362 (536)
T COG3559 340 GAGALEQAFLVLLFSIISILAAA 362 (536)
T ss_pred chHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555666666666655553
No 322
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=36.31 E-value=4.4e+02 Score=26.16 Aligned_cols=24 Identities=8% Similarity=0.153 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhCh
Q 013991 329 LAITGFSLLVFQLSLYPFLERILGP 353 (432)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~l~~~~~~ 353 (432)
.....+.+.+++ ..++++-+.++.
T Consensus 303 i~~y~~~~~iaG-y~S~~~yk~~~g 326 (521)
T PF02990_consen 303 IILYALTSFIAG-YVSARLYKSFGG 326 (521)
T ss_pred HHHHHHHhhHHH-HHHHHHHHHcCC
Confidence 333444444444 355555555543
No 323
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=36.06 E-value=33 Score=29.37 Aligned_cols=50 Identities=12% Similarity=0.076 Sum_probs=30.3
Q ss_pred HHHhhhccchhhH-HhhhhhhcccchhhhhhhhHHHHHHHHHHHHHHHHhhh
Q 013991 143 FLLGSLNGLLGPI-KAYACEIFREEHQALGLSTVSTAWGIGLIIGPALGGFL 193 (432)
Q Consensus 143 ~~~G~~~g~~~~~-~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 193 (432)
.-.|+|.|.+..+ ..-+.+.+| +......++.....-+....|-.+.-++
T Consensus 179 MasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~ifi 229 (241)
T PF11299_consen 179 MASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMSIFI 229 (241)
T ss_pred HHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467877766554 666777776 4555666666666655555555444433
No 324
>PF06341 DUF1056: Protein of unknown function (DUF1056); InterPro: IPR009406 This entry is represented by Bacteriophage bIL286, Orf42. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several putative head-tail joining bacteriophage proteins.
Probab=34.65 E-value=96 Score=20.40 Aligned_cols=36 Identities=8% Similarity=-0.000 Sum_probs=20.3
Q ss_pred hHHHHHHHHHHHhhhccchhhHHhhhhhhcccchhh
Q 013991 134 NFWMAVLTRFLLGSLNGLLGPIKAYACEIFREEHQA 169 (432)
Q Consensus 134 ~~~~l~~~r~~~G~~~g~~~~~~~~i~~~~~~~~r~ 169 (432)
++..+.......++..+.......+++|..+++++|
T Consensus 27 ~it~F~~n~~~g~i~i~I~l~l~G~isE~i~~~Kgg 62 (63)
T PF06341_consen 27 NITAFLINQIAGLISIGITLFLAGLISEFISKQKGG 62 (63)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 333444444444445555555678888888775443
No 325
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=32.70 E-value=1.5e+02 Score=26.12 Aligned_cols=11 Identities=18% Similarity=0.407 Sum_probs=4.3
Q ss_pred hhHHHHHHHHH
Q 013991 41 TELFSIWIIVL 51 (432)
Q Consensus 41 ~~~~~~~~~~~ 51 (432)
+++.-+.++.+
T Consensus 180 ~RivG~~LAv~ 190 (254)
T PF07857_consen 180 KRIVGIILAVF 190 (254)
T ss_pred chhHhHHHHHH
Confidence 34443333333
No 326
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=32.12 E-value=3.2e+02 Score=23.19 Aligned_cols=32 Identities=13% Similarity=0.164 Sum_probs=13.8
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHhHHHHHHH
Q 013991 319 NYSTQMVGEVLAITGFSLLVFQLSLYPFLERI 350 (432)
Q Consensus 319 g~s~~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 350 (432)
|.+.........+...........++.++.++
T Consensus 153 g~~~~~~~~~igivs~i~~~~G~~lG~~~~~~ 184 (206)
T TIGR02840 153 GLNPLATSILVAVMSFIFVSLGLFLGKKISKK 184 (206)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 44444444444444444433333455555444
No 327
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=31.64 E-value=2.1e+02 Score=21.00 Aligned_cols=30 Identities=20% Similarity=0.132 Sum_probs=16.4
Q ss_pred HHHHHHhhhhhhh-ccCChHHHHHHHHHHHH
Q 013991 95 RALTSVFWGLVAD-RYGRKPVIIMGTASVVI 124 (432)
Q Consensus 95 ~~~~~~~~G~l~d-r~Grr~~l~~~~~~~~~ 124 (432)
.++.+.+.|.+.| ++|-++.+.+.+++.++
T Consensus 55 pil~G~~lG~WLD~~~~t~~~~tl~~lllGv 85 (100)
T TIGR02230 55 PTLLGVAVGIWLDRHYPSPFSWTLTMLIVGV 85 (100)
T ss_pred HHHHHHHHHHHHHhhcCCCcHHHHHHHHHHH
Confidence 3455566666666 46666655544444433
No 328
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=31.08 E-value=3.1e+02 Score=26.24 Aligned_cols=97 Identities=9% Similarity=0.047 Sum_probs=51.5
Q ss_pred HHhcCCccccchhhhhhHHHHHHhHHHHHHHHhhhhhhhccCChHHHHHHHH-HHHHHHHHHhhhhhHHHHHHHHHHHhh
Q 013991 69 KDFQIAKREEDIGSYAGYVGSSFMFGRALTSVFWGLVADRYGRKPVIIMGTA-SVVIFNTLFGLSVNFWMAVLTRFLLGS 147 (432)
Q Consensus 69 ~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~r~~~G~ 147 (432)
... .++++ ...+.+...+...++.++-+....+. -|-....+.. .+...........++.....+-++.|+
T Consensus 31 ~~~-l~~~~------~~~li~at~~~sgi~Tllq~~~~~~~-~~lp~~~G~sfa~i~~~~~~~~~~~~~~~~g~~i~~gl 102 (415)
T TIGR00801 31 LAP-LSAEQ------TQYLVSISLLTSGIGTLLQLFRTGGQ-IGLPSYLGSSFAFVSPMIAIGSGLGIPAIMGALIATGL 102 (415)
T ss_pred ccc-CCHHH------HHHHHHHHHHHHHHHHHHHHhhhcCc-eeeeeeecCcHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 445 77777 88888888999999999998877654 2222222222 111111111111233333333344444
Q ss_pred hccchhhH-----Hhhhhhhcccchhhhhhh
Q 013991 148 LNGLLGPI-----KAYACEIFREEHQALGLS 173 (432)
Q Consensus 148 ~~g~~~~~-----~~~i~~~~~~~~r~~~~~ 173 (432)
........ ...+.+.+|+...+....
T Consensus 103 ~~~ll~~~~~~~~~~~i~~~~Pp~v~g~iv~ 133 (415)
T TIGR00801 103 VYTLLSLLIKKLGPRWLMKLFPPVVTGPVVM 133 (415)
T ss_pred HHHHHHHHHHHhhHHHHHhcCCchhHHHhHH
Confidence 33333221 235577888887775443
No 329
>PF11085 YqhR: Conserved membrane protein YqhR; InterPro: IPR024563 This family of proteins is conserved in the Bacillaceae family of the Firmicutes. Their function is not known.
Probab=30.98 E-value=2.9e+02 Score=22.50 Aligned_cols=64 Identities=20% Similarity=0.223 Sum_probs=28.8
Q ss_pred HHhhhcCCCcCCCcccccchhhHHHHHH--HHHHHHHHHHhHHHHHHHh-ChhHHHHHHHHHHHHHHHHh
Q 013991 305 FSLWANSPKKLGGLNYSTQMVGEVLAIT--GFSLLVFQLSLYPFLERIL-GPIMVARIAGVLTIPLLTSY 371 (432)
Q Consensus 305 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~--~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~ 371 (432)
-|.++..|...+ ++.....|.+.++. ++.++++++ +-..+-+|+ +...=+..|.+.-++.+.++
T Consensus 50 ~P~~ll~Pf~~g--~wk~t~~G~~igi~~~gv~Si~aAl-lY~~~l~k~~g~W~Gi~YG~~~W~ivF~~l 116 (173)
T PF11085_consen 50 GPNFLLEPFALG--DWKNTWLGNLIGIVFIGVFSIVAAL-LYYALLKKFKGPWPGILYGLAWWAIVFFVL 116 (173)
T ss_pred ccChhhhhhhcc--chhhhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcccchHHHHHHHHHHHHHHHh
Confidence 344444443332 33445556554443 344445553 444444554 33334445555544444333
No 330
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=29.18 E-value=2.1e+02 Score=20.27 Aligned_cols=41 Identities=15% Similarity=0.070 Sum_probs=28.6
Q ss_pred HHHHHHhhhhhhhccCC-------hHHHHHHHHHHHHHHHHHhhhhhH
Q 013991 95 RALTSVFWGLVADRYGR-------KPVIIMGTASVVIFNTLFGLSVNF 135 (432)
Q Consensus 95 ~~~~~~~~G~l~dr~Gr-------r~~l~~~~~~~~~~~~~~~~~~~~ 135 (432)
.....+.++++.+|..+ ++.+..+.++...+.++++...+.
T Consensus 31 ~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS~ 78 (86)
T PF10785_consen 31 ATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRSS 78 (86)
T ss_pred HHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 34556677777776654 678888888888888887775543
No 331
>COG4769 Predicted membrane protein [Function unknown]
Probab=28.22 E-value=97 Score=24.96 Aligned_cols=53 Identities=17% Similarity=0.305 Sum_probs=36.2
Q ss_pred HHHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhh
Q 013991 89 SSFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFGLSVNFWMAVLTRFLLGS 147 (432)
Q Consensus 89 s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~ 147 (432)
-.+.....+.+...=++..++|.|..-.+|.. ..-++.+|..++++++++.+-
T Consensus 80 Fl~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS------~mGaF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 80 FLYSFAGAILSTLFMYFLYQFGPKYLSLLGIS------VMGAFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCceEeeeehh------hHHHHHHhHHHHHHHHHHHhc
Confidence 34445555666667778889998887444432 234678899999999888754
No 332
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=26.29 E-value=5.2e+02 Score=24.71 Aligned_cols=29 Identities=14% Similarity=0.124 Sum_probs=13.7
Q ss_pred hhcccchhhhhhhhHHHHHHHHHHHHHHH
Q 013991 161 EIFREEHQALGLSTVSTAWGIGLIIGPAL 189 (432)
Q Consensus 161 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 189 (432)
|...-++---+.++...+...|.++.++.
T Consensus 315 ~~~~iDD~~~~~~vHg~~Gi~G~i~~glf 343 (404)
T TIGR03644 315 DKLKIDDPVGAISVHGVAGIWGTLVVPIT 343 (404)
T ss_pred HhCCCCCCcCchHhhhHHHHHHHHHHHHh
Confidence 44444444445555554444444444443
No 333
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=26.14 E-value=1.9e+02 Score=18.65 Aligned_cols=46 Identities=11% Similarity=0.231 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHhhhcccCCcCCCcccccccccCccchHHHHHHHHHHHHHHHHHhhcccc
Q 013991 178 AWGIGLIIGPALGGFLAQPAEKYPNLFSSESLFGKFPYFLPCLCISLFAFGVTIAAFWLPET 239 (432)
Q Consensus 178 ~~~~g~~~g~~~~~~l~~~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 239 (432)
+.-+|.++|...+..-.. .+++....++..+.+++.......+|++
T Consensus 10 s~il~~vvgyI~ssL~~~----------------~~n~~~~~Ii~vi~~i~~~~~~~~i~~~ 55 (57)
T PF11151_consen 10 SFILGEVVGYIGSSLTGV----------------TYNFTTAAIIAVIFGIIVANIIAVIPKK 55 (57)
T ss_pred HHHHHHHHHHHHHHHhCC----------------CCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 344566666555544433 3445555555555555544444445543
No 334
>COG2119 Predicted membrane protein [Function unknown]
Probab=25.98 E-value=3.9e+02 Score=22.22 Aligned_cols=38 Identities=13% Similarity=0.288 Sum_probs=28.6
Q ss_pred HHhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHH
Q 013991 90 SFMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNT 127 (432)
Q Consensus 90 ~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~ 127 (432)
...+..+++-..+.++++|+..|.+-.++.+++.+..+
T Consensus 142 g~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fal 179 (190)
T COG2119 142 GMILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFAL 179 (190)
T ss_pred HHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHH
Confidence 34556677778888999999999998887777665543
No 335
>PF09605 Trep_Strep: Hypothetical bacterial integral membrane protein (Trep_Strep); InterPro: IPR011733 This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae (strain ATCC BAA-255 / R6).
Probab=24.92 E-value=3.9e+02 Score=22.20 Aligned_cols=40 Identities=8% Similarity=0.161 Sum_probs=29.0
Q ss_pred HhHHHHHHHHhhhhhhhccCChHHHHHHHHHHHHHHHHHh
Q 013991 91 FMFGRALTSVFWGLVADRYGRKPVIIMGTASVVIFNTLFG 130 (432)
Q Consensus 91 ~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~ 130 (432)
..+...+..++.=.+..|.++|..+.+..++.++...+++
T Consensus 37 ~~i~ali~g~vyml~~~KV~K~G~~~i~~~i~gl~~~~~G 76 (186)
T PF09605_consen 37 PAIAALICGIVYMLMVAKVPKRGAFLIMGIIMGLIFFLMG 76 (186)
T ss_pred HHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHh
Confidence 3455567777788889999999998877777666655543
No 336
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=24.54 E-value=6.9e+02 Score=24.64 Aligned_cols=51 Identities=18% Similarity=0.124 Sum_probs=34.7
Q ss_pred HhhhccchhhH-Hhhhhhhcc-cchhhhhhhhHHHHHHHHHHHHHHHHhhhcc
Q 013991 145 LGSLNGLLGPI-KAYACEIFR-EEHQALGLSTVSTAWGIGLIIGPALGGFLAQ 195 (432)
Q Consensus 145 ~G~~~g~~~~~-~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 195 (432)
.|+..-..... -..+.+.+| ++++...+|-++...++-..+-..+++.+.+
T Consensus 292 Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir 344 (491)
T PF03219_consen 292 YGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIR 344 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444 556667776 5667788888887777777777788888887
No 337
>PF11283 DUF3084: Protein of unknown function (DUF3084); InterPro: IPR021435 This bacterial family of proteins has no known function.
Probab=24.22 E-value=1.6e+02 Score=20.43 Aligned_cols=28 Identities=14% Similarity=0.025 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhChhHHHHH
Q 013991 330 AITGFSLLVFQLSLYPFLERILGPIMVARI 359 (432)
Q Consensus 330 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 359 (432)
.+.-++++++ .+++++..|.|+|++-..
T Consensus 8 ~l~~lgG~IA--~~GD~iG~kvGKkrlslF 35 (79)
T PF11283_consen 8 ALLLLGGLIA--YLGDRIGSKVGKKRLSLF 35 (79)
T ss_pred HHHHHHHHHH--HHHHHHHHHHhHHHhhhh
Confidence 3333444443 477888888888776543
No 338
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=23.65 E-value=6.8e+02 Score=24.26 Aligned_cols=30 Identities=30% Similarity=0.524 Sum_probs=23.6
Q ss_pred cccchhhhhhhhHHHHHHHHHHHHHHHHhh
Q 013991 163 FREEHQALGLSTVSTAWGIGLIIGPALGGF 192 (432)
Q Consensus 163 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 192 (432)
+.+++.+...++.+.+.+.|...-|...|.
T Consensus 17 w~~~d~~W~l~l~GTAIGAGmLfLPI~~g~ 46 (443)
T PRK13629 17 WRKSDTTWTLGLFGTAIGAGVLFFPIRAGF 46 (443)
T ss_pred CccccchHHHHHHHHHHhHHHHHHHHHHhc
Confidence 455667788888898888888888887754
No 339
>PRK11469 hypothetical protein; Provisional
Probab=23.57 E-value=3.2e+02 Score=22.73 Aligned_cols=76 Identities=13% Similarity=0.058 Sum_probs=39.1
Q ss_pred CchhHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccccchhhhhhHHHHHHhHHHHHHHH-hhhhhhhccCChHHHHH
Q 013991 39 PITELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKREEDIGSYAGYVGSSFMFGRALTSV-FWGLVADRYGRKPVIIM 117 (432)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~-~~G~l~dr~Grr~~l~~ 117 (432)
..+..+.+.++.-++.+..+.-... .|.+.-. .........+....... ...++.+++|||.-++-
T Consensus 104 ~~~~~l~LaiAtSiDAlavGi~~~~-------~g~~~~~------~~~~ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lg 170 (188)
T PRK11469 104 GFWLLVTTAIATSLDAMAVGVGLAF-------LQVNIIA------TALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILG 170 (188)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHH-------hhhhHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666666666666554433222 1222222 23333333333333333 44456667888877777
Q ss_pred HHHHHHHHHH
Q 013991 118 GTASVVIFNT 127 (432)
Q Consensus 118 ~~~~~~~~~~ 127 (432)
+.++..++.-
T Consensus 171 G~iLI~iGi~ 180 (188)
T PRK11469 171 GLVLIGIGVQ 180 (188)
T ss_pred HHHHHHHHHH
Confidence 7777776654
No 340
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=23.57 E-value=2.8e+02 Score=21.73 Aligned_cols=27 Identities=26% Similarity=0.011 Sum_probs=20.0
Q ss_pred hhhhhcccchhhhhhhhHHHHHHHHHH
Q 013991 158 YACEIFREEHQALGLSTVSTAWGIGLI 184 (432)
Q Consensus 158 ~i~~~~~~~~r~~~~~~~~~~~~~g~~ 184 (432)
-+.|++|++.|....+.++.......-
T Consensus 59 aLkdi~P~~~R~~i~~~~~~~~~~~k~ 85 (137)
T PF04281_consen 59 ALKDIFPPSVRNWISSTVSTTSSAVKS 85 (137)
T ss_pred HHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 368999999999888777655554443
No 341
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=23.11 E-value=3.3e+02 Score=25.28 Aligned_cols=25 Identities=24% Similarity=0.242 Sum_probs=18.1
Q ss_pred hHHHHHHHhChhHHHHHHHHHHHHH
Q 013991 343 LYPFLERILGPIMVARIAGVLTIPL 367 (432)
Q Consensus 343 ~~~~l~~~~~~~~~~~~~~~~~~~~ 367 (432)
+.+.+.|++|.|+.+.++.....+.
T Consensus 77 ~~~~~Ir~~g~K~tm~lav~~Y~ly 101 (390)
T KOG3097|consen 77 FMPLLIRFLGTKWTMVLAVFPYALY 101 (390)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4447889999999987776665543
No 342
>PF11298 DUF3099: Protein of unknown function (DUF3099); InterPro: IPR021449 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=21.81 E-value=1.8e+02 Score=19.91 Aligned_cols=31 Identities=10% Similarity=0.053 Sum_probs=22.1
Q ss_pred hhhccCChHHHHHHHHHHHHHHHHHhhhhhH
Q 013991 105 VADRYGRKPVIIMGTASVVIFNTLFGLSVNF 135 (432)
Q Consensus 105 l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 135 (432)
--|+-.|++-+.+.+.+-..+.++..+....
T Consensus 10 ~~d~~~R~r~Y~i~M~~Ri~~fvlA~~~~~~ 40 (73)
T PF11298_consen 10 SQDQRRRRRRYLIMMGIRIPCFVLAAVVYRL 40 (73)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3466678888888888877777777666544
No 343
>COG3619 Predicted membrane protein [Function unknown]
Probab=20.85 E-value=5.5e+02 Score=22.18 Aligned_cols=28 Identities=14% Similarity=-0.012 Sum_probs=15.9
Q ss_pred hhHHHHHHhHHHHHHHHhhhhhhhccCC
Q 013991 84 AGYVGSSFMFGRALTSVFWGLVADRYGR 111 (432)
Q Consensus 84 ~~~~~s~~~~~~~~~~~~~G~l~dr~Gr 111 (432)
.........+..+++......+..|..|
T Consensus 57 ~a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 57 LAVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4555555666666665555555555554
No 344
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein. This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.
Probab=20.36 E-value=4.9e+02 Score=23.67 Aligned_cols=36 Identities=11% Similarity=-0.029 Sum_probs=22.6
Q ss_pred hHHHHHHHHHHhhccccchhhhHHHHHHHhcCCccc
Q 013991 42 ELFSIWIIVLCTALPISSLFPFLYFMIKDFQIAKRE 77 (432)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 77 (432)
.+.......................+.+.+|+++..
T Consensus 171 ~~~~~~~~~~~i~~~s~~~v~~~~~i~~~lgi~~~~ 206 (307)
T TIGR00367 171 LIVLLIIGLTGLVVGSRLLVDGAVQIAEIFGISEKI 206 (307)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 333334444444444455666777888999999877
Done!