Query 013992
Match_columns 432
No_of_seqs 357 out of 2600
Neff 10.9
Searched_HMMs 46136
Date Fri Mar 29 00:47:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013992.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013992hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01299 synapt_SV2 synaptic 100.0 8.1E-38 1.7E-42 306.4 22.4 388 23-423 159-698 (742)
2 COG2271 UhpC Sugar phosphate p 100.0 2.5E-36 5.5E-41 265.9 17.5 363 25-420 23-393 (448)
3 KOG0569 Permease of the major 100.0 2.8E-34 6.1E-39 264.6 29.6 382 26-415 6-410 (485)
4 TIGR00887 2A0109 phosphate:H+ 100.0 5.4E-35 1.2E-39 282.5 24.5 388 23-422 8-441 (502)
5 PRK14995 methyl viologen resis 100.0 1.6E-34 3.5E-39 278.3 24.7 377 28-420 3-398 (495)
6 PRK10077 xylE D-xylose transpo 100.0 1E-33 2.2E-38 273.2 30.3 376 26-421 7-412 (479)
7 PRK10406 alpha-ketoglutarate t 100.0 3.7E-34 8E-39 271.7 24.9 348 25-420 16-383 (432)
8 KOG0254 Predicted transporter 100.0 2.4E-33 5.2E-38 271.0 30.4 383 27-419 41-441 (513)
9 TIGR00879 SP MFS transporter, 100.0 1.8E-33 4E-38 271.6 28.5 386 25-420 22-430 (481)
10 PRK10642 proline/glycine betai 100.0 3.9E-34 8.4E-39 275.5 23.5 356 30-420 15-389 (490)
11 TIGR02332 HpaX 4-hydroxyphenyl 100.0 1.3E-33 2.8E-38 265.9 25.4 368 27-422 4-382 (412)
12 COG2814 AraJ Arabinose efflux 100.0 5.1E-34 1.1E-38 255.1 20.3 286 27-362 9-296 (394)
13 TIGR00898 2A0119 cation transp 100.0 2.9E-33 6.3E-38 271.6 22.6 349 52-421 110-458 (505)
14 TIGR00891 2A0112 putative sial 100.0 1.3E-32 2.8E-37 259.9 25.2 370 25-421 6-376 (405)
15 PRK09556 uhpT sugar phosphate 100.0 3.8E-34 8.3E-39 274.2 13.8 362 27-420 25-396 (467)
16 PRK12307 putative sialic acid 100.0 2E-32 4.4E-37 260.2 23.9 355 26-421 13-369 (426)
17 PRK11663 regulatory protein Uh 100.0 1E-32 2.2E-37 261.9 18.0 285 27-339 19-306 (434)
18 TIGR00711 efflux_EmrB drug res 100.0 8.2E-33 1.8E-37 267.4 17.0 374 32-421 3-396 (485)
19 PRK03545 putative arabinose tr 100.0 2.9E-32 6.4E-37 255.6 19.7 279 27-356 5-284 (390)
20 KOG0253 Synaptic vesicle trans 100.0 1.9E-31 4.1E-36 229.3 22.8 388 25-431 72-489 (528)
21 PRK11551 putative 3-hydroxyphe 100.0 7.8E-32 1.7E-36 254.5 22.4 347 25-421 9-356 (406)
22 PRK09952 shikimate transporter 100.0 1.6E-31 3.4E-36 253.7 23.5 349 27-417 18-387 (438)
23 TIGR00903 2A0129 major facilit 100.0 5.4E-32 1.2E-36 249.7 18.9 320 44-421 4-328 (368)
24 PRK15075 citrate-proton sympor 100.0 6.8E-31 1.5E-35 249.5 25.1 281 29-352 13-314 (434)
25 TIGR00895 2A0115 benzoate tran 100.0 1.8E-31 3.9E-36 251.5 18.9 374 25-421 11-386 (398)
26 PRK10504 putative transporter; 100.0 2.2E-30 4.8E-35 249.2 23.9 374 33-423 12-403 (471)
27 PRK09705 cynX putative cyanate 100.0 1.3E-30 2.7E-35 244.3 20.7 281 28-360 7-288 (393)
28 TIGR00893 2A0114 d-galactonate 100.0 5.5E-31 1.2E-35 247.9 17.5 279 40-343 3-282 (399)
29 PRK03893 putative sialic acid 100.0 2.3E-29 4.9E-34 243.9 28.0 384 27-420 16-413 (496)
30 PRK11273 glpT sn-glycerol-3-ph 100.0 2.7E-30 5.8E-35 246.7 20.6 286 27-340 25-317 (452)
31 TIGR00894 2A0114euk Na(+)-depe 100.0 2.5E-30 5.3E-35 248.3 20.2 290 24-342 12-327 (465)
32 TIGR00890 2A0111 Oxalate/Forma 100.0 7.1E-31 1.5E-35 245.5 15.8 323 47-420 19-342 (377)
33 TIGR00710 efflux_Bcr_CflA drug 100.0 1.1E-29 2.4E-34 238.2 22.1 278 40-362 14-292 (385)
34 PRK15034 nitrate/nitrite trans 100.0 6.4E-29 1.4E-33 230.6 26.6 294 15-362 15-336 (462)
35 KOG0255 Synaptic vesicle trans 100.0 5.6E-30 1.2E-34 249.0 20.1 383 20-427 74-460 (521)
36 TIGR00886 2A0108 nitrite extru 100.0 9.9E-30 2.1E-34 236.9 20.6 293 35-361 5-310 (366)
37 PRK15402 multidrug efflux syst 100.0 8.6E-30 1.9E-34 240.4 20.1 293 26-362 8-301 (406)
38 PLN00028 nitrate transmembrane 100.0 3.1E-29 6.8E-34 240.1 24.2 275 30-342 35-318 (476)
39 TIGR00881 2A0104 phosphoglycer 100.0 5.7E-31 1.2E-35 246.3 11.9 277 39-341 3-281 (379)
40 PRK10213 nepI ribonucleoside t 100.0 2.9E-28 6.3E-33 228.2 29.9 271 29-351 18-290 (394)
41 PRK10091 MFS transport protein 100.0 4.3E-29 9.4E-34 233.4 24.1 278 33-360 5-283 (382)
42 PRK10133 L-fucose transporter; 100.0 2.9E-29 6.4E-34 237.3 23.0 297 20-359 15-342 (438)
43 PF07690 MFS_1: Major Facilita 100.0 4.7E-31 1E-35 244.4 10.2 341 37-420 2-346 (352)
44 PF00083 Sugar_tr: Sugar (and 100.0 6E-35 1.3E-39 279.5 -17.3 375 38-425 7-401 (451)
45 KOG1330 Sugar transporter/spin 100.0 8.6E-32 1.9E-36 239.6 3.7 281 24-339 26-310 (493)
46 TIGR00900 2A0121 H+ Antiporter 100.0 4.3E-30 9.3E-35 239.2 14.5 338 38-421 6-349 (365)
47 PRK03699 putative transporter; 100.0 3.5E-28 7.7E-33 228.2 27.1 283 28-357 4-286 (394)
48 PRK15403 multidrug efflux syst 100.0 2.4E-28 5.3E-33 230.0 25.8 269 33-345 18-287 (413)
49 TIGR00712 glpT glycerol-3-phos 100.0 5.9E-29 1.3E-33 236.5 19.4 289 29-343 25-318 (438)
50 TIGR00883 2A0106 metabolite-pr 100.0 5.4E-28 1.2E-32 227.4 23.4 328 41-417 3-356 (394)
51 COG2223 NarK Nitrate/nitrite t 100.0 5.4E-28 1.2E-32 213.9 20.9 291 27-365 10-307 (417)
52 PRK11043 putative transporter; 100.0 1E-27 2.2E-32 225.9 22.8 269 40-357 15-283 (401)
53 PRK10473 multidrug efflux syst 100.0 4.1E-27 8.9E-32 221.1 26.7 278 39-362 11-289 (392)
54 PRK11652 emrD multidrug resist 100.0 4.2E-28 9.2E-33 228.0 19.0 263 32-341 9-272 (394)
55 PRK11102 bicyclomycin/multidru 100.0 7.8E-28 1.7E-32 225.0 20.3 268 45-355 5-273 (377)
56 KOG2532 Permease of the major 100.0 1.3E-27 2.9E-32 223.3 21.3 276 58-362 65-353 (466)
57 PRK05122 major facilitator sup 100.0 3.4E-28 7.4E-33 229.1 16.7 325 32-420 16-349 (399)
58 TIGR00885 fucP L-fucose:H+ sym 100.0 1.6E-27 3.4E-32 223.6 19.2 283 33-361 5-318 (410)
59 KOG2533 Permease of the major 100.0 4.2E-27 9.1E-32 220.4 21.1 298 30-354 44-355 (495)
60 PRK12382 putative transporter; 100.0 1.7E-27 3.6E-32 223.8 18.2 321 36-420 20-349 (392)
61 PRK11195 lysophospholipid tran 100.0 1.5E-27 3.3E-32 223.2 17.8 271 36-349 8-278 (393)
62 TIGR00892 2A0113 monocarboxyla 100.0 6.8E-28 1.5E-32 229.7 15.4 364 26-420 14-380 (455)
63 PRK03633 putative MFS family t 100.0 6.7E-26 1.4E-30 211.9 27.8 274 33-358 8-281 (381)
64 TIGR00805 oat sodium-independe 100.0 2.9E-27 6.3E-32 231.8 19.2 305 34-358 36-415 (633)
65 TIGR00899 2A0120 sugar efflux 100.0 2.5E-27 5.4E-32 221.5 18.0 269 40-356 6-279 (375)
66 TIGR00897 2A0118 polyol permea 99.9 6.8E-27 1.5E-31 220.0 19.4 254 50-346 32-291 (402)
67 KOG0252 Inorganic phosphate tr 99.9 2.4E-28 5.2E-33 216.7 7.3 386 26-425 36-458 (538)
68 PRK09874 drug efflux system pr 99.9 2.8E-26 6.1E-31 216.8 21.5 282 35-359 18-305 (408)
69 PRK10489 enterobactin exporter 99.9 5.2E-28 1.1E-32 229.0 9.3 329 41-421 27-360 (417)
70 cd06174 MFS The Major Facilita 99.9 1.7E-26 3.6E-31 213.8 17.9 309 36-421 4-313 (352)
71 TIGR00896 CynX cyanate transpo 99.9 3.8E-25 8.3E-30 204.9 25.8 265 47-361 16-282 (355)
72 PRK11646 multidrug resistance 99.9 1.6E-25 3.5E-30 210.1 21.0 315 47-419 26-343 (400)
73 PF06609 TRI12: Fungal trichot 99.9 6.5E-25 1.4E-29 208.0 24.0 376 32-423 45-455 (599)
74 TIGR00901 2A0125 AmpG-related 99.9 1.5E-25 3.3E-30 207.8 18.6 325 47-418 4-354 (356)
75 PRK11010 ampG muropeptide tran 99.9 4.1E-25 8.9E-30 212.1 19.9 286 23-356 7-303 (491)
76 PRK10054 putative transporter; 99.9 2.5E-25 5.4E-30 208.4 16.4 275 39-361 15-293 (395)
77 TIGR00806 rfc RFC reduced fola 99.9 5.2E-24 1.1E-28 194.0 21.3 294 28-339 25-325 (511)
78 TIGR00902 2A0127 phenyl propri 99.9 1.3E-24 2.7E-29 203.2 17.0 275 38-361 11-289 (382)
79 PRK06814 acylglycerophosphoeth 99.9 1.3E-24 2.7E-29 230.5 17.0 342 34-419 18-380 (1140)
80 PRK08633 2-acyl-glycerophospho 99.9 1.8E-24 4E-29 230.1 18.2 329 48-419 27-368 (1146)
81 PRK15011 sugar efflux transpor 99.9 6E-24 1.3E-28 199.4 18.6 265 40-355 24-295 (393)
82 COG0738 FucP Fucose permease [ 99.9 2.5E-23 5.5E-28 183.1 21.0 313 32-393 14-349 (422)
83 PRK11128 putative 3-phenylprop 99.9 1.1E-22 2.5E-27 190.1 24.0 267 45-360 18-288 (382)
84 PRK11902 ampG muropeptide tran 99.9 6.6E-23 1.4E-27 193.0 22.4 277 38-358 6-292 (402)
85 KOG3764 Vesicular amine transp 99.9 2.7E-25 6E-30 194.0 2.6 243 69-355 106-349 (464)
86 KOG2615 Permease of the major 99.9 7.7E-24 1.7E-28 183.9 10.5 145 67-212 66-216 (451)
87 TIGR00882 2A0105 oligosacchari 99.9 3.3E-22 7.1E-27 188.1 20.8 279 40-360 11-302 (396)
88 PRK09528 lacY galactoside perm 99.9 1.8E-22 3.9E-27 191.3 17.7 272 48-361 27-311 (420)
89 KOG2504 Monocarboxylate transp 99.9 3E-23 6.5E-28 196.7 11.7 342 25-381 40-401 (509)
90 PTZ00207 hypothetical protein; 99.9 1.9E-21 4E-26 185.9 21.3 178 25-211 22-207 (591)
91 PRK10207 dipeptide/tripeptide 99.9 6.9E-22 1.5E-26 188.9 18.3 171 36-210 19-194 (489)
92 TIGR00889 2A0110 nucleoside tr 99.9 4E-22 8.8E-27 187.9 15.8 321 41-415 12-350 (418)
93 COG2807 CynX Cyanate permease 99.9 1.2E-20 2.6E-25 163.8 22.7 284 30-363 11-295 (395)
94 TIGR00792 gph sugar (Glycoside 99.9 5.9E-22 1.3E-26 189.1 11.3 265 53-361 22-306 (437)
95 TIGR00924 yjdL_sub1_fam amino 99.9 2.1E-20 4.6E-25 178.6 21.2 169 37-209 16-191 (475)
96 PF05977 MFS_3: Transmembrane 99.9 5.3E-21 1.2E-25 182.3 16.1 332 35-416 14-350 (524)
97 TIGR02718 sider_RhtX_FptX side 99.9 2E-20 4.4E-25 175.6 17.1 275 33-354 3-286 (390)
98 PRK09584 tppB putative tripept 99.8 1.2E-18 2.7E-23 167.5 19.0 162 39-204 29-195 (500)
99 KOG2563 Permease of the major 99.8 1.6E-17 3.5E-22 148.5 23.3 351 24-420 38-406 (480)
100 PF13347 MFS_2: MFS/sugar tran 99.8 2.4E-18 5.1E-23 163.4 15.3 302 52-398 23-345 (428)
101 KOG4686 Predicted sugar transp 99.8 8.1E-20 1.8E-24 152.5 3.4 351 26-423 39-402 (459)
102 TIGR01301 GPH_sucrose GPH fami 99.8 1E-16 2.2E-21 150.5 23.4 285 44-363 17-357 (477)
103 PRK10642 proline/glycine betai 99.8 9.1E-18 2E-22 162.0 16.4 181 50-233 269-458 (490)
104 PF03825 Nuc_H_symport: Nucleo 99.8 5.3E-17 1.1E-21 150.6 18.2 326 41-417 12-345 (400)
105 PRK09669 putative symporter Ya 99.7 2.6E-17 5.7E-22 157.0 14.6 259 52-356 31-308 (444)
106 TIGR00788 fbt folate/biopterin 99.7 2.1E-17 4.6E-22 157.6 10.7 356 34-423 29-401 (468)
107 PRK15462 dipeptide/tripeptide 99.7 6.9E-16 1.5E-20 145.5 19.7 164 39-206 17-185 (493)
108 PRK10429 melibiose:sodium symp 99.7 6.4E-17 1.4E-21 155.4 12.9 275 44-359 19-313 (473)
109 PRK09848 glucuronide transport 99.7 1.4E-15 3E-20 145.5 16.5 263 53-361 31-313 (448)
110 TIGR00880 2_A_01_02 Multidrug 99.6 1.1E-15 2.3E-20 121.4 10.7 135 76-211 5-140 (141)
111 KOG2325 Predicted transporter/ 99.6 3.7E-14 8E-19 130.9 21.5 184 27-214 30-234 (488)
112 TIGR01272 gluP glucose/galacto 99.6 6.6E-15 1.4E-19 132.8 15.6 201 117-358 5-224 (310)
113 PF03137 OATP: Organic Anion T 99.6 3.9E-17 8.5E-22 156.5 0.0 306 34-354 6-386 (539)
114 KOG3626 Organic anion transpor 99.6 6.4E-15 1.4E-19 141.3 13.7 305 31-355 97-474 (735)
115 PRK11462 putative transporter; 99.6 1.8E-13 4E-18 130.6 23.7 255 53-354 32-305 (460)
116 PF11700 ATG22: Vacuole efflux 99.6 2.3E-13 4.9E-18 128.9 23.2 252 70-354 71-361 (477)
117 TIGR01299 synapt_SV2 synaptic 99.6 1.4E-14 3.1E-19 143.2 15.2 140 72-213 598-737 (742)
118 TIGR00889 2A0110 nucleoside tr 99.6 3.4E-15 7.3E-20 140.9 9.9 161 52-212 229-405 (418)
119 PRK15011 sugar efflux transpor 99.6 4.8E-14 1E-18 132.4 17.1 155 52-211 237-392 (393)
120 PRK11551 putative 3-hydroxyphe 99.6 1.5E-14 3.3E-19 136.6 13.6 158 51-211 240-397 (406)
121 PRK09528 lacY galactoside perm 99.6 8.7E-15 1.9E-19 138.8 10.9 140 72-212 265-406 (420)
122 PF01306 LacY_symp: LacY proto 99.6 1.8E-13 4E-18 124.8 18.2 276 45-362 21-309 (412)
123 COG2211 MelB Na+/melibiose sym 99.6 1.4E-13 3.1E-18 126.8 17.2 270 53-363 35-323 (467)
124 TIGR00890 2A0111 Oxalate/Forma 99.6 2.5E-14 5.4E-19 133.6 11.4 148 52-203 226-375 (377)
125 PF03209 PUCC: PUCC protein; 99.6 1.4E-12 3E-17 117.0 21.6 286 57-383 6-316 (403)
126 cd06174 MFS The Major Facilita 99.5 2.1E-13 4.6E-18 126.0 15.1 165 41-209 185-351 (352)
127 PF05631 DUF791: Protein of un 99.5 1.9E-12 4.2E-17 114.2 19.8 264 50-358 53-325 (354)
128 PRK05122 major facilitator sup 99.5 2.3E-13 5.1E-18 128.3 15.1 140 72-212 252-391 (399)
129 PRK09874 drug efflux system pr 99.5 2E-13 4.3E-18 129.1 14.1 158 50-208 238-396 (408)
130 TIGR00892 2A0113 monocarboxyla 99.5 3.4E-13 7.4E-18 128.9 15.0 152 50-204 260-415 (455)
131 TIGR00902 2A0127 phenyl propri 99.5 4E-13 8.7E-18 125.7 14.6 152 50-207 224-376 (382)
132 TIGR00899 2A0120 sugar efflux 99.5 4E-13 8.7E-18 125.6 14.1 151 56-211 225-375 (375)
133 PRK12382 putative transporter; 99.5 5.1E-13 1.1E-17 125.6 14.6 150 52-207 237-386 (392)
134 COG3104 PTR2 Dipeptide/tripept 99.5 3.2E-11 6.9E-16 110.5 24.2 171 36-210 26-206 (498)
135 PRK09705 cynX putative cyanate 99.5 1.6E-12 3.4E-17 122.1 15.3 160 49-213 223-385 (393)
136 PRK10489 enterobactin exporter 99.5 1.2E-12 2.6E-17 124.1 14.2 159 51-213 243-403 (417)
137 PRK03545 putative arabinose tr 99.4 3.8E-12 8.2E-17 119.6 16.8 150 53-208 228-378 (390)
138 KOG2816 Predicted transporter 99.4 1.1E-12 2.3E-17 122.9 12.6 355 30-424 21-381 (463)
139 PRK09556 uhpT sugar phosphate 99.4 2E-12 4.3E-17 124.3 14.8 170 36-209 263-448 (467)
140 PRK03699 putative transporter; 99.4 1.5E-12 3.2E-17 122.4 13.4 158 50-212 224-382 (394)
141 TIGR00883 2A0106 metabolite-pr 99.4 5.2E-13 1.1E-17 125.6 10.0 151 47-200 235-391 (394)
142 PRK03633 putative MFS family t 99.4 2.3E-12 4.9E-17 120.7 13.9 151 52-209 221-371 (381)
143 TIGR00897 2A0118 polyol permea 99.4 3E-12 6.5E-17 120.7 14.6 156 48-209 239-400 (402)
144 PRK10077 xylE D-xylose transpo 99.4 6.6E-12 1.4E-16 121.4 17.1 160 49-212 289-460 (479)
145 TIGR00879 SP MFS transporter, 99.4 1.7E-12 3.6E-17 125.4 12.8 175 34-212 287-473 (481)
146 PRK09952 shikimate transporter 99.4 4.2E-12 9E-17 120.9 14.9 154 56-212 276-435 (438)
147 COG2270 Permeases of the major 99.4 3.4E-11 7.4E-16 107.9 19.1 305 70-418 59-386 (438)
148 TIGR00893 2A0114 d-galactonate 99.4 4.2E-12 9.1E-17 119.4 14.1 163 40-206 224-395 (399)
149 PRK03893 putative sialic acid 99.4 1.7E-12 3.6E-17 126.2 10.2 147 51-201 295-444 (496)
150 PRK11128 putative 3-phenylprop 99.4 1.4E-11 3.1E-16 115.3 14.9 146 53-204 227-373 (382)
151 TIGR00887 2A0109 phosphate:H+ 99.3 1.6E-11 3.4E-16 119.2 14.8 164 50-213 307-492 (502)
152 TIGR00891 2A0112 putative sial 99.3 6.4E-12 1.4E-16 118.7 11.5 138 55-195 263-401 (405)
153 PF01770 Folate_carrier: Reduc 99.3 3.1E-10 6.8E-15 103.2 21.7 306 34-348 8-321 (412)
154 TIGR00900 2A0121 H+ Antiporter 99.3 4.3E-12 9.4E-17 118.0 10.1 131 52-185 232-364 (365)
155 PF11700 ATG22: Vacuole efflux 99.3 4.4E-11 9.5E-16 113.4 16.2 162 48-212 299-470 (477)
156 PRK11010 ampG muropeptide tran 99.3 1.2E-10 2.6E-15 112.3 19.4 156 53-212 245-405 (491)
157 TIGR00895 2A0115 benzoate tran 99.3 2E-11 4.2E-16 115.0 12.5 132 47-181 266-397 (398)
158 PRK11273 glpT sn-glycerol-3-ph 99.3 2E-11 4.3E-16 116.9 12.6 157 49-209 271-434 (452)
159 KOG0569 Permease of the major 99.3 1.3E-10 2.9E-15 108.4 17.1 161 47-212 286-457 (485)
160 TIGR00882 2A0105 oligosacchari 99.3 3.5E-11 7.6E-16 113.3 13.5 133 72-205 257-390 (396)
161 TIGR00792 gph sugar (Glycoside 99.3 3.1E-11 6.7E-16 115.3 13.4 115 72-186 260-382 (437)
162 PRK10504 putative transporter; 99.3 3.2E-11 6.8E-16 116.4 13.0 135 48-185 278-416 (471)
163 PRK12307 putative sialic acid 99.3 9.8E-11 2.1E-15 111.5 15.7 137 51-191 251-389 (426)
164 TIGR00898 2A0119 cation transp 99.3 4.9E-11 1.1E-15 116.1 12.6 134 76-212 362-497 (505)
165 PF05977 MFS_3: Transmembrane 99.2 8.1E-11 1.7E-15 112.9 12.7 152 50-205 237-389 (524)
166 PRK11663 regulatory protein Uh 99.2 6.6E-11 1.4E-15 112.7 11.9 156 48-207 260-421 (434)
167 PRK10054 putative transporter; 99.2 8.8E-11 1.9E-15 110.3 12.4 140 72-213 247-388 (395)
168 PRK10406 alpha-ketoglutarate t 99.2 1.7E-10 3.6E-15 109.9 14.4 157 51-211 263-425 (432)
169 PRK15075 citrate-proton sympor 99.2 2.2E-10 4.7E-15 109.2 15.2 135 49-186 256-396 (434)
170 KOG2504 Monocarboxylate transp 99.2 6.6E-11 1.4E-15 112.9 11.2 176 32-210 299-476 (509)
171 PF06813 Nodulin-like: Nodulin 99.2 5E-10 1.1E-14 95.9 15.3 177 29-212 1-184 (250)
172 TIGR02718 sider_RhtX_FptX side 99.2 1.3E-10 2.8E-15 109.2 12.6 148 54-205 231-386 (390)
173 TIGR01272 gluP glucose/galacto 99.2 3.7E-10 8.1E-15 102.0 14.8 130 61-197 173-302 (310)
174 COG2814 AraJ Arabinose efflux 99.2 4.6E-10 9.9E-15 101.7 14.5 157 47-209 228-385 (394)
175 COG2270 Permeases of the major 99.2 2.1E-10 4.5E-15 102.9 11.6 176 33-212 256-431 (438)
176 PF03825 Nuc_H_symport: Nucleo 99.2 3.3E-10 7.1E-15 105.5 13.5 169 41-212 217-398 (400)
177 PLN00028 nitrate transmembrane 99.2 4.8E-11 1E-15 114.8 8.2 150 55-210 277-433 (476)
178 TIGR00896 CynX cyanate transpo 99.2 2.2E-10 4.8E-15 106.2 11.6 136 50-189 216-353 (355)
179 PRK10091 MFS transport protein 99.2 4.5E-10 9.8E-15 105.2 13.5 151 53-208 222-374 (382)
180 TIGR02332 HpaX 4-hydroxyphenyl 99.2 1.7E-10 3.7E-15 109.0 10.2 154 43-199 254-410 (412)
181 TIGR00712 glpT glycerol-3-phos 99.2 1.3E-10 2.8E-15 110.9 9.5 158 51-212 271-436 (438)
182 PRK15402 multidrug efflux syst 99.1 5.3E-10 1.1E-14 105.7 13.3 146 54-204 238-389 (406)
183 PRK10213 nepI ribonucleoside t 99.1 1.2E-09 2.6E-14 102.6 15.1 145 53-203 239-384 (394)
184 PRK11646 multidrug resistance 99.1 2.7E-10 5.8E-15 107.2 10.5 152 52-206 229-384 (400)
185 PRK11902 ampG muropeptide tran 99.1 8.3E-10 1.8E-14 104.1 13.4 148 54-209 233-389 (402)
186 TIGR00710 efflux_Bcr_CflA drug 99.1 3.7E-09 8E-14 99.2 17.1 137 54-196 229-372 (385)
187 PRK09848 glucuronide transport 99.1 8.3E-10 1.8E-14 105.7 12.6 129 53-184 250-388 (448)
188 PF01306 LacY_symp: LacY proto 99.1 6.8E-10 1.5E-14 101.6 11.0 151 61-212 251-403 (412)
189 PRK10429 melibiose:sodium symp 99.1 1.1E-09 2.3E-14 105.5 12.3 133 50-185 250-394 (473)
190 TIGR00881 2A0104 phosphoglycer 99.1 2.8E-10 6E-15 106.4 8.0 139 50-192 235-379 (379)
191 PRK08633 2-acyl-glycerophospho 99.1 1.3E-09 2.8E-14 116.9 13.2 144 55-201 257-401 (1146)
192 PF03092 BT1: BT1 family; Int 99.1 6.2E-09 1.3E-13 98.4 16.0 275 51-353 10-296 (433)
193 PF13347 MFS_2: MFS/sugar tran 99.0 1.4E-09 3.1E-14 103.4 11.3 141 41-184 235-384 (428)
194 COG2223 NarK Nitrate/nitrite t 99.0 1E-09 2.3E-14 98.4 8.4 149 51-207 238-398 (417)
195 PRK11195 lysophospholipid tran 99.0 5.3E-09 1.2E-13 98.2 13.4 139 56-198 231-370 (393)
196 TIGR00711 efflux_EmrB drug res 99.0 1.8E-09 3.9E-14 104.6 10.6 131 51-184 275-410 (485)
197 TIGR00901 2A0125 AmpG-related 99.0 1.4E-09 3.1E-14 100.8 9.1 116 50-168 228-355 (356)
198 PRK09669 putative symporter Ya 99.0 4.3E-09 9.4E-14 100.6 12.5 115 72-186 267-390 (444)
199 PF07690 MFS_1: Major Facilita 99.0 1.4E-09 2.9E-14 100.7 8.7 123 50-175 225-352 (352)
200 TIGR00894 2A0114euk Na(+)-depe 99.0 3.2E-09 6.9E-14 102.3 10.9 174 34-211 264-451 (465)
201 PRK06814 acylglycerophosphoeth 99.0 5.2E-09 1.1E-13 112.0 13.1 146 53-201 247-413 (1140)
202 PRK11102 bicyclomycin/multidru 99.0 1.5E-08 3.2E-13 94.8 14.2 121 56-180 220-345 (377)
203 PRK10133 L-fucose transporter; 98.9 1.4E-08 3.1E-13 96.5 14.0 138 58-201 287-424 (438)
204 PRK14995 methyl viologen resis 98.9 5.5E-09 1.2E-13 101.2 11.2 127 53-182 281-411 (495)
205 KOG0253 Synaptic vesicle trans 98.9 3.2E-09 6.8E-14 93.2 8.0 130 80-212 392-521 (528)
206 COG0477 ProP Permeases of the 98.9 2.5E-08 5.4E-13 90.3 14.4 155 45-202 16-177 (338)
207 TIGR00903 2A0129 major facilit 98.9 2.9E-08 6.3E-13 92.1 14.8 153 49-211 210-366 (368)
208 COG2271 UhpC Sugar phosphate p 98.9 3.7E-09 8.1E-14 94.9 8.4 173 31-207 252-431 (448)
209 COG2807 CynX Cyanate permease 98.9 6.9E-08 1.5E-12 85.1 15.9 177 22-206 203-381 (395)
210 PRK15034 nitrate/nitrite trans 98.9 5.9E-09 1.3E-13 97.9 9.9 134 76-209 293-454 (462)
211 PRK10473 multidrug efflux syst 98.9 7.6E-09 1.6E-13 97.3 10.4 132 57-197 230-361 (392)
212 PRK11043 putative transporter; 98.9 6.9E-08 1.5E-12 91.1 15.5 129 53-185 225-358 (401)
213 TIGR00769 AAA ADP/ATP carrier 98.9 1.9E-06 4.1E-11 81.2 24.3 130 53-182 25-189 (472)
214 TIGR00926 2A1704 Peptide:H+ sy 98.9 1.2E-06 2.5E-11 86.5 23.9 156 50-208 7-180 (654)
215 KOG4686 Predicted sugar transp 98.8 6.8E-08 1.5E-12 81.9 12.4 149 56-209 290-442 (459)
216 KOG0637 Sucrose transporter an 98.8 1.6E-08 3.4E-13 91.6 8.6 127 52-181 53-202 (498)
217 TIGR00924 yjdL_sub1_fam amino 98.8 1.6E-07 3.4E-12 90.4 15.6 135 72-207 315-465 (475)
218 KOG0252 Inorganic phosphate tr 98.8 8.1E-09 1.8E-13 93.4 5.9 178 31-212 304-500 (538)
219 PF00083 Sugar_tr: Sugar (and 98.8 8.9E-11 1.9E-15 112.6 -7.5 160 48-212 270-439 (451)
220 COG2211 MelB Na+/melibiose sym 98.7 1.7E-07 3.7E-12 87.1 13.4 137 46-185 251-397 (467)
221 TIGR00885 fucP L-fucose:H+ sym 98.7 1.5E-07 3.2E-12 88.8 12.8 123 72-197 272-399 (410)
222 KOG3098 Uncharacterized conser 98.7 3.2E-06 7E-11 78.7 20.2 253 75-365 56-335 (461)
223 TIGR00788 fbt folate/biopterin 98.7 2.2E-07 4.8E-12 89.1 12.9 150 59-211 281-447 (468)
224 PRK11652 emrD multidrug resist 98.7 7.3E-07 1.6E-11 84.0 16.0 124 57-184 234-360 (394)
225 PRK09584 tppB putative tripept 98.7 3.9E-07 8.5E-12 88.2 14.1 134 72-205 319-474 (500)
226 PF06963 FPN1: Ferroportin1 (F 98.7 4.2E-06 9.2E-11 78.0 19.7 327 77-420 46-403 (432)
227 KOG3762 Predicted transporter 98.6 4.4E-08 9.5E-13 90.5 6.2 165 41-209 381-546 (618)
228 PF06779 DUF1228: Protein of u 98.6 1.5E-07 3.2E-12 65.2 7.3 81 43-126 4-84 (85)
229 PF03209 PUCC: PUCC protein; 98.6 1.3E-06 2.9E-11 79.0 15.1 149 55-206 233-394 (403)
230 PRK11462 putative transporter; 98.6 1.3E-06 2.8E-11 83.8 15.6 113 72-184 266-387 (460)
231 KOG0254 Predicted transporter 98.6 1.4E-06 3E-11 84.9 15.0 172 36-212 300-486 (513)
232 KOG3764 Vesicular amine transp 98.5 1.1E-07 2.4E-12 84.7 5.6 159 47-209 286-453 (464)
233 COG0738 FucP Fucose permease [ 98.5 1.2E-06 2.6E-11 78.6 11.0 150 47-203 252-402 (422)
234 TIGR00886 2A0108 nitrite extru 98.5 2.5E-07 5.5E-12 86.1 7.0 115 52-170 246-365 (366)
235 PRK10207 dipeptide/tripeptide 98.4 5.4E-06 1.2E-10 79.9 15.0 137 72-208 312-474 (489)
236 PF05978 UNC-93: Ion channel r 98.4 2.5E-06 5.5E-11 67.5 10.4 108 74-182 42-149 (156)
237 KOG2532 Permease of the major 98.3 1.5E-06 3.3E-11 82.3 8.3 173 32-209 259-446 (466)
238 KOG3810 Micronutrient transpor 98.3 1.6E-05 3.5E-10 69.8 13.0 272 53-342 27-301 (433)
239 KOG3574 Acetyl-CoA transporter 98.3 4.6E-05 1E-09 67.9 15.6 145 28-178 28-189 (510)
240 TIGR01301 GPH_sucrose GPH fami 98.3 1.4E-05 3.1E-10 75.8 13.7 141 73-213 309-475 (477)
241 PRK15403 multidrug efflux syst 98.3 1.4E-05 3.1E-10 75.6 13.0 145 50-200 237-387 (413)
242 PF02487 CLN3: CLN3 protein; 98.2 4.5E-06 9.7E-11 76.4 6.8 134 72-211 62-197 (402)
243 KOG2533 Permease of the major 98.1 1.8E-05 3.8E-10 75.4 10.7 161 32-196 274-442 (495)
244 COG3202 ATP/ADP translocase [E 98.1 0.0058 1.3E-07 57.0 25.3 155 26-184 22-210 (509)
245 PRK15462 dipeptide/tripeptide 98.1 5.2E-06 1.1E-10 79.1 6.0 127 291-422 24-151 (493)
246 PF03219 TLC: TLC ATP/ADP tran 98.1 0.0024 5.3E-08 60.9 23.2 153 27-183 20-205 (491)
247 KOG4332 Predicted sugar transp 98.0 4.1E-05 8.8E-10 64.9 9.1 98 50-151 56-154 (454)
248 PF12832 MFS_1_like: MFS_1 lik 98.0 1.4E-05 3.1E-10 55.0 5.4 66 41-109 10-75 (77)
249 KOG0255 Synaptic vesicle trans 98.0 0.0002 4.2E-09 70.2 15.2 131 81-213 362-496 (521)
250 KOG3762 Predicted transporter 98.0 2.5E-05 5.5E-10 72.7 8.0 148 266-427 366-514 (618)
251 PF06609 TRI12: Fungal trichot 97.9 4.3E-05 9.4E-10 74.0 9.0 184 33-216 312-560 (599)
252 PF12832 MFS_1_like: MFS_1 lik 97.8 0.00027 5.9E-09 48.7 9.0 65 285-350 9-73 (77)
253 PTZ00207 hypothetical protein; 97.7 0.0008 1.7E-08 65.7 14.0 160 51-214 373-557 (591)
254 KOG2816 Predicted transporter 97.7 0.00045 9.8E-09 65.5 12.0 126 54-183 265-391 (463)
255 PF00854 PTR2: POT family; In 97.4 0.001 2.2E-08 62.0 10.0 109 100-209 2-122 (372)
256 KOG1479 Nucleoside transporter 97.4 0.01 2.3E-07 54.3 15.5 171 41-213 28-207 (406)
257 COG3104 PTR2 Dipeptide/tripept 97.3 0.0022 4.7E-08 59.9 10.8 133 72-205 327-482 (498)
258 KOG2615 Permease of the major 97.3 0.0014 2.9E-08 59.0 9.0 123 58-183 289-413 (451)
259 PF13000 Acatn: Acetyl-coenzym 97.3 0.0096 2.1E-07 55.7 14.2 143 35-182 4-178 (544)
260 KOG3097 Predicted membrane pro 97.2 0.13 2.8E-06 45.6 19.7 99 80-179 69-182 (390)
261 KOG1237 H+/oligopeptide sympor 97.2 0.0058 1.3E-07 59.7 13.0 157 48-208 55-243 (571)
262 PF02487 CLN3: CLN3 protein; 97.1 0.0029 6.2E-08 58.4 9.2 139 35-181 251-394 (402)
263 TIGR00939 2a57 Equilibrative N 97.1 0.0052 1.1E-07 58.2 10.5 132 77-213 53-199 (437)
264 KOG3098 Uncharacterized conser 97.0 0.023 4.9E-07 53.5 14.2 103 77-180 287-410 (461)
265 PF03092 BT1: BT1 family; Int 96.9 0.022 4.8E-07 54.2 13.0 147 63-212 252-415 (433)
266 PRK03612 spermidine synthase; 96.8 0.046 1E-06 53.2 14.7 138 61-202 45-190 (521)
267 PF07672 MFS_Mycoplasma: Mycop 96.6 0.0073 1.6E-07 51.6 6.8 54 154-209 2-61 (267)
268 TIGR00806 rfc RFC reduced fola 96.5 0.0012 2.5E-08 62.0 1.8 119 295-423 45-164 (511)
269 KOG1330 Sugar transporter/spin 96.5 0.0012 2.7E-08 60.8 2.0 114 304-425 60-173 (493)
270 PF06813 Nodulin-like: Nodulin 96.3 0.0068 1.5E-07 52.4 5.2 75 291-367 17-91 (250)
271 TIGR00880 2_A_01_02 Multidrug 96.0 0.00069 1.5E-08 52.9 -2.4 92 321-420 7-98 (141)
272 TIGR00805 oat sodium-independe 95.7 0.0049 1.1E-07 61.6 1.8 68 294-362 51-118 (633)
273 PF05631 DUF791: Protein of un 95.6 0.19 4E-06 45.5 11.1 51 307-357 64-114 (354)
274 PF06963 FPN1: Ferroportin1 (F 95.6 0.13 2.8E-06 48.5 10.6 128 53-183 280-417 (432)
275 KOG2563 Permease of the major 95.5 0.043 9.4E-07 50.8 6.7 148 62-212 297-452 (480)
276 PF06779 DUF1228: Protein of u 95.1 0.32 6.9E-06 34.0 8.7 70 293-363 9-78 (85)
277 KOG2325 Predicted transporter/ 95.0 0.041 8.8E-07 52.1 5.1 82 123-205 388-470 (488)
278 TIGR00939 2a57 Equilibrative N 94.9 0.35 7.6E-06 46.0 11.2 111 69-180 307-430 (437)
279 PF01733 Nucleoside_tran: Nucl 93.6 0.015 3.3E-07 52.5 -0.8 20 316-335 186-205 (309)
280 PF03137 OATP: Organic Anion T 92.9 0.03 6.5E-07 54.7 0.0 150 32-184 306-514 (539)
281 KOG1479 Nucleoside transporter 92.1 3.5 7.6E-05 38.3 12.1 125 53-178 265-399 (406)
282 PF01770 Folate_carrier: Reduc 91.8 2.5 5.3E-05 39.6 11.0 102 65-166 281-384 (412)
283 PF01733 Nucleoside_tran: Nucl 90.8 0.083 1.8E-06 47.8 0.5 107 73-179 186-305 (309)
284 PF07672 MFS_Mycoplasma: Mycop 90.8 5 0.00011 34.8 11.0 101 72-173 144-254 (267)
285 PF05978 UNC-93: Ion channel r 90.4 0.29 6.3E-06 39.0 3.1 69 317-389 42-110 (156)
286 KOG4332 Predicted sugar transp 89.9 4.1 8.8E-05 35.5 9.6 133 72-205 285-426 (454)
287 KOG3810 Micronutrient transpor 85.2 6.9 0.00015 35.6 8.6 117 64-183 266-384 (433)
288 KOG0637 Sucrose transporter an 85.1 0.7 1.5E-05 43.2 2.6 130 72-201 335-487 (498)
289 TIGR00926 2A1704 Peptide:H+ sy 83.9 4.5 9.7E-05 40.8 7.9 70 293-362 4-74 (654)
290 PF06912 DUF1275: Protein of u 83.6 25 0.00055 29.5 12.2 38 149-186 153-190 (209)
291 KOG3880 Predicted small molecu 79.2 8.7 0.00019 34.3 6.9 71 110-180 330-400 (409)
292 KOG2881 Predicted membrane pro 75.3 54 0.0012 28.4 10.4 34 322-355 250-283 (294)
293 COG0477 ProP Permeases of the 70.8 41 0.00088 29.4 9.7 62 294-355 20-82 (338)
294 COG5336 Uncharacterized protei 70.0 18 0.00038 26.3 5.3 37 72-108 45-82 (116)
295 KOG3880 Predicted small molecu 67.6 7.3 0.00016 34.8 3.7 136 72-212 65-202 (409)
296 KOG2601 Iron transporter [Inor 66.4 46 0.001 30.9 8.5 122 82-204 76-220 (503)
297 COG4262 Predicted spermidine s 66.3 1.1E+02 0.0024 28.2 11.0 78 72-149 46-132 (508)
298 TIGR00769 AAA ADP/ATP carrier 66.2 1.3E+02 0.0029 29.1 14.3 71 130-201 274-345 (472)
299 PF02990 EMP70: Endomembrane p 62.1 87 0.0019 30.8 10.4 12 262-273 249-260 (521)
300 COG5336 Uncharacterized protei 59.6 67 0.0015 23.5 7.1 36 325-360 55-91 (116)
301 COG3619 Predicted membrane pro 59.2 1.1E+02 0.0025 26.0 15.1 27 72-98 58-84 (226)
302 PRK13629 threonine/serine tran 58.6 1.7E+02 0.0038 28.0 15.4 42 152-199 18-59 (443)
303 TIGR02230 ATPase_gene1 F0F1-AT 49.6 99 0.0021 22.5 7.6 31 326-356 57-87 (100)
304 PF03219 TLC: TLC ATP/ADP tran 48.7 2.7E+02 0.0058 27.2 12.9 70 131-201 291-361 (491)
305 COG1230 CzcD Co/Zn/Cd efflux s 45.5 2.3E+02 0.0049 25.5 11.0 80 27-115 21-103 (296)
306 COG2119 Predicted membrane pro 43.9 1.5E+02 0.0032 24.3 7.1 36 78-113 143-178 (190)
307 PF11299 DUF3100: Protein of u 42.7 17 0.00036 30.8 1.8 53 128-181 177-229 (241)
308 COG4769 Predicted membrane pro 41.7 38 0.00082 26.9 3.4 54 78-137 82-135 (181)
309 KOG1237 H+/oligopeptide sympor 39.6 55 0.0012 32.6 5.1 64 121-184 457-520 (571)
310 COG0861 TerC Membrane protein 39.2 2.7E+02 0.0057 24.4 16.5 58 137-197 31-88 (254)
311 PF11947 DUF3464: Protein of u 38.1 1.6E+02 0.0034 23.4 6.3 31 143-173 115-145 (153)
312 PF03741 TerC: Integral membra 37.9 2.3E+02 0.005 23.3 13.8 58 139-199 13-70 (183)
313 PF07857 DUF1632: CEO family ( 37.3 2.8E+02 0.0062 24.2 12.7 16 292-307 194-209 (254)
314 PF02694 UPF0060: Uncharacteri 35.4 70 0.0015 23.4 3.7 49 312-360 54-102 (107)
315 PRK02237 hypothetical protein; 35.2 1.1E+02 0.0024 22.5 4.7 48 313-360 57-104 (109)
316 PF02632 BioY: BioY family; I 33.5 1.4E+02 0.003 23.6 5.5 25 76-100 60-84 (148)
317 PF13000 Acatn: Acetyl-coenzym 32.0 4E+02 0.0086 26.2 9.1 59 126-184 409-467 (544)
318 PF12805 FUSC-like: FUSC-like 29.9 4E+02 0.0086 23.7 11.0 36 103-138 3-39 (284)
319 PF06123 CreD: Inner membrane 29.7 4.9E+02 0.011 24.9 9.3 19 102-120 329-347 (430)
320 PF10785 NADH-u_ox-rdase: NADH 29.6 1.9E+02 0.0042 20.3 5.2 40 83-122 32-78 (86)
321 COG1268 BioY Uncharacterized c 29.4 1.6E+02 0.0035 24.2 5.4 23 76-98 89-111 (184)
322 PRK11715 inner membrane protei 28.6 5.2E+02 0.011 24.8 9.3 22 187-208 382-403 (436)
323 PF11151 DUF2929: Protein of u 28.6 1.6E+02 0.0035 18.8 6.3 46 166-212 10-55 (57)
324 TIGR01666 YCCS hypothetical me 27.8 7E+02 0.015 25.8 11.5 50 88-137 42-96 (704)
325 PF01405 PsbT: Photosystem II 27.8 1.1E+02 0.0023 16.4 2.9 10 205-214 19-28 (29)
326 PF02694 UPF0060: Uncharacteri 27.7 1.4E+02 0.0031 21.9 4.2 47 72-118 57-103 (107)
327 KOG3574 Acetyl-CoA transporter 27.7 1.8E+02 0.0038 27.4 5.8 61 126-186 373-433 (510)
328 PRK10263 DNA translocase FtsK; 26.0 2.3E+02 0.0051 31.2 7.1 14 170-183 143-156 (1355)
329 PRK02237 hypothetical protein; 25.7 2.4E+02 0.0051 20.8 5.0 48 72-119 59-106 (109)
330 PF01988 VIT1: VIT family; In 25.3 4.2E+02 0.009 22.4 13.5 34 323-356 168-201 (213)
331 PF00854 PTR2: POT family; In 24.4 2.7E+02 0.0058 25.8 6.9 50 72-121 75-124 (372)
332 PRK04949 putative sulfate tran 24.3 4.8E+02 0.01 22.8 8.6 22 318-339 88-109 (251)
333 PF04346 EutH: Ethanolamine ut 23.9 5.8E+02 0.013 23.6 17.6 121 72-197 50-174 (354)
334 KOG3626 Organic anion transpor 23.0 8.7E+02 0.019 25.2 14.0 64 30-93 234-297 (735)
335 KOG2601 Iron transporter [Inor 22.9 6.3E+02 0.014 23.9 8.3 56 294-349 45-100 (503)
336 KOG1278 Endosomal membrane pro 22.6 88 0.0019 30.5 3.1 40 300-339 347-386 (628)
337 COG1457 CodB Purine-cytosine p 22.3 7.1E+02 0.015 24.0 13.9 58 148-205 11-68 (442)
338 COG2981 CysZ Uncharacterized p 22.0 5.2E+02 0.011 22.3 7.2 20 320-339 88-107 (250)
339 PF04281 Tom22: Mitochondrial 21.9 2.6E+02 0.0055 21.8 5.0 24 146-169 59-82 (137)
340 PRK11875 psbT photosystem II r 21.8 1.4E+02 0.003 16.2 2.4 9 206-214 20-28 (31)
341 PF06645 SPC12: Microsomal sig 21.5 1.7E+02 0.0036 20.0 3.6 15 82-96 20-34 (76)
342 COG2119 Predicted membrane pro 21.2 4.8E+02 0.01 21.5 15.3 37 321-357 143-179 (190)
343 KOG1277 Endosomal membrane pro 21.0 1.6E+02 0.0036 27.9 4.4 114 6-126 260-387 (593)
344 KOG4830 Predicted sugar transp 20.8 1.7E+02 0.0037 25.8 4.2 52 293-345 34-94 (412)
345 PF03596 Cad: Cadmium resistan 20.2 4E+02 0.0086 22.2 6.1 13 88-100 154-166 (191)
No 1
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=8.1e-38 Score=306.40 Aligned_cols=388 Identities=19% Similarity=0.208 Sum_probs=286.9
Q ss_pred CCCChhHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHH
Q 013992 23 SWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSI 102 (432)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l 102 (432)
....++.|..+++++++.+..+++...++.++|.+.++++.+..+. +++.+++.++.+++++++|+++||+|||+++
T Consensus 159 ~~~~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~---g~l~s~~~lG~iiG~li~G~LsDR~GRR~~l 235 (742)
T TIGR01299 159 CGHGRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGK---GMLGLIVYLGMMVGAFFWGGLADKLGRKQCL 235 (742)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 3456778888888999999999999999999999999999988887 9999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhcc
Q 013992 103 LVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFT 182 (432)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~ 182 (432)
++++++.+++.++++++++++.++++|+++|++.+...+...+++.|++|+++|++.+++...++.+|.++++.++..+.
T Consensus 236 ii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il 315 (742)
T TIGR01299 236 LICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAII 315 (742)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988776554
Q ss_pred CCC------------CchHHHHHhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchH---HHH----H
Q 013992 183 RAP------------GTWRWMLGVAGIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVE---TEI----R 243 (432)
Q Consensus 183 ~~~------------~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~ 243 (432)
... .+||+.+++.++++++.++.++++||+|+|+..+++.+++.+.++++...+... ... .
T Consensus 316 ~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~ 395 (742)
T TIGR01299 316 PHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVN 395 (742)
T ss_pred HhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHH
Confidence 321 249999999988888888778899999999999999999999998887655321 111 0
Q ss_pred HHHHHhHHHH--H-HccCc----------------cchhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHH
Q 013992 244 DLKESVDKEI--E-EEGSS----------------EKINLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQ 304 (432)
Q Consensus 244 ~~~~~~~~~~--~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (432)
..+.....++ + +.+.. .+.+.+++++. ..++.++.....+ ++...+++++..|.|.+++
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~-~~~~~tl~l~~~w-f~~~~~yygl~~w~P~~~~ 473 (742)
T TIGR01299 396 HIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNP-EVREITIKLMGVW-FTLSFGYYGLSVWFPDMIK 473 (742)
T ss_pred HHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCc-cHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 1111000000 0 00000 01134455544 4555555544444 4455578899999998764
Q ss_pred Hc---CC------------------------------C------------------------------------------
Q 013992 305 LS---GF------------------------------A------------------------------------------ 309 (432)
Q Consensus 305 ~~---~~------------------------------~------------------------------------------ 309 (432)
.. .. .
T Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~ 553 (742)
T TIGR01299 474 HLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFID 553 (742)
T ss_pred HHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhh
Confidence 41 00 0
Q ss_pred ---------------------------------------chhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHH
Q 013992 310 ---------------------------------------SNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLS 350 (432)
Q Consensus 310 ---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 350 (432)
+.........+..++.+++.++.|+++||+|||+++.++.+
T Consensus 554 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~ 633 (742)
T TIGR01299 554 TLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMV 633 (742)
T ss_pred hhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 00112444566678889999999999999999999999888
Q ss_pred HHHHHHHHHHHHHhccCCCCCccchhcccccccccccccccccccCccchhhhhccCCCCccccccccccccc
Q 013992 351 GVILSLGVLSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCASHSNKVKG 423 (432)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~~~~~~~g 423 (432)
+.+++++++.+... .....+..++.+++.....+......+|.+|+ +.|++ +.|++.+..+....
T Consensus 634 lsai~~ll~~~~~s---~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt---~~Rgt--a~Gi~~~~~rlGai 698 (742)
T TIGR01299 634 LSCISCFFLSFGNS---ESAMIALLCLFGGLSIAAWNALDVLTVELYPS---DKRAT--AFGFLNALCKAAAV 698 (742)
T ss_pred HHHHHHHHHHHHcc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH---HHHHH--HHHHHHHHHHHHHH
Confidence 88887766655422 11122222333333333333333334555555 99999 99999887766543
No 2
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.5e-36 Score=265.90 Aligned_cols=363 Identities=17% Similarity=0.057 Sum_probs=278.2
Q ss_pred CChhHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHH
Q 013992 25 KNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILV 104 (432)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~ 104 (432)
.+++|+.++..+++++...++.+..++...|++.++.+.+..|. |.+.+.+.+.+.++..+.|.++||.+.|+.+..
T Consensus 23 y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~l---G~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~ 99 (448)
T COG2271 23 YKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQL---GILGSAFSITYGVSKFVMGVLSDRSNPRYFMAF 99 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHH---HHHHHHHHHHHHHHHHHhhhhcccCCCceeehH
Confidence 34678889999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHH--hhcc
Q 013992 105 ADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLIN--LAFT 182 (432)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~--~~l~ 182 (432)
++++.++.+++++++++...+.+..++.|..+|.-+|++...++.|+|++|||+..++++.+.++|..+.+++. +++.
T Consensus 100 gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~ 179 (448)
T COG2271 100 GLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFA 179 (448)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998 8888
Q ss_pred CCCCchHHHHHhhHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHc---cC
Q 013992 183 RAPGTWRWMLGVAGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEE---GS 258 (432)
Q Consensus 183 ~~~~~wr~~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 258 (432)
.+.+ ||..|++.++++++..+. ++..+|+|+..-.+ +.|+ ..++..+.. +++++ -.
T Consensus 180 ~~~~-w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP-~ie~----------------~~~d~~e~~--~~~~~~~~ls 239 (448)
T COG2271 180 FHGG-WRAAFYFPGIIAIIVALILLFLLRDRPQSEGLP-PIEE----------------YRGDPLEIY--EEEKENEGLT 239 (448)
T ss_pred hccc-hhHHHHHHHHHHHHHHHHHHHHhCCCccccCCC-CHHH----------------hhcCchhhh--hhhccCCCcc
Confidence 7776 999999999888776665 66778887521100 0111 000001100 01111 11
Q ss_pred ccchhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013992 259 SEKINLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDR 338 (432)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 338 (432)
..+.-.+.+++||..|...+..+++.. .-+.+..|.|.|+.+..+.+..++......+=.++++|++++|+++||
T Consensus 240 ~~~i~~~YVL~Nk~iW~la~a~vfvYi-----vR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDk 314 (448)
T COG2271 240 AWQIFVKYVLKNKLIWLLALANVFVYV-----VRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDK 314 (448)
T ss_pred HHHHHHHHHHcChHHHHHHHHHHHHHH-----HHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 122345567778877765555444444 789999999999999999999999999999999999999999999999
Q ss_pred h--CCchhhHhHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccccccccccccCccchhhhhccCCCCcccccc
Q 013992 339 T--GRKKLLVISLSGVILSLGVLSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCAS 416 (432)
Q Consensus 339 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~ 416 (432)
+ |||.+..+.+.+....+++........+...........|++...+.........|..|+ +.-++ ++|+...
T Consensus 315 lfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK---~AaGt--A~Gf~Gl 389 (448)
T COG2271 315 LFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPK---KAAGT--ATGFVGL 389 (448)
T ss_pred hcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccH---hhccc--hhchhhh
Confidence 7 566555444333333333333322222223333444555555555555555555666666 88888 8887655
Q ss_pred cccc
Q 013992 417 HSNK 420 (432)
Q Consensus 417 ~~~~ 420 (432)
....
T Consensus 390 f~Yl 393 (448)
T COG2271 390 FAYL 393 (448)
T ss_pred HHHH
Confidence 5444
No 3
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.8e-34 Score=264.63 Aligned_cols=382 Identities=31% Similarity=0.494 Sum_probs=294.8
Q ss_pred ChhHHHHHHHHHHhhcccceeccccchhhhhhhh--------ccc--cchh-hhHHHHHHHHHHHHHHHHHHHhhhhhhc
Q 013992 26 NPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRD--------DFK--SVDR-KTLLQESIVSMAVAGAIIGAAIGGWMND 94 (432)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--------~~~--~~~~-~~~~~~~~~s~~~~~~~i~~~~~g~l~d 94 (432)
.++.........++.+-.++....+++..+.+.+ .+| .++. -....+.+.+++.+|.++|+.+.+.++|
T Consensus 6 t~~L~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~ 85 (485)
T KOG0569|consen 6 TRRLLLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLAD 85 (485)
T ss_pred cHHHHHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555566666677788888888876655433 344 2222 2334589999999999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHHHHHH---hCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHH
Q 013992 95 RFGRRTSILVADFLFFVGAVIMAA---APNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQ 171 (432)
Q Consensus 95 r~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~ 171 (432)
|+|||..+..+.++..++.++..+ .+++++++++|++.|+..|........++.|..|++.||....+.+.+..+|.
T Consensus 86 ~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ 165 (485)
T KOG0569|consen 86 RFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGI 165 (485)
T ss_pred hhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHH
Confidence 999999999998888888777655 57899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh-hccCCCCchHHHHHhhHHHHHHHHHHHhhcCCCHHHHHH-cCCHHHHHHHHHHhCCCCchHHHHHHHHHHh
Q 013992 172 FLSYLINL-AFTRAPGTWRWMLGVAGIPALLQFILMLLLPESPRWLYR-KGREEEAQAILRKVYPAHEVETEIRDLKESV 249 (432)
Q Consensus 172 ~i~~~i~~-~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (432)
.++..++. .+......|++.+....+++++..+.+.++||+|||+.. +++++++++.++.+++.++.+++.+...+..
T Consensus 166 ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~ 245 (485)
T KOG0569|consen 166 LLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREI 245 (485)
T ss_pred HHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHH
Confidence 99976663 333333359999999999999999999999999999998 8999999999999998887666555444333
Q ss_pred HHHHHHccCccchhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHH
Q 013992 250 DKEIEEEGSSEKINLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGS 329 (432)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (432)
++++ ..+++..+.+++++++..|+.....+.+.+.+++.+.+.+.+|...++++.+.. ..++.......+....+.+
T Consensus 246 ~~~~--~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~-~~~a~~an~~~g~v~~~~t 322 (485)
T KOG0569|consen 246 EEEE--LEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFT-PEEAQYANLGIGIVNLLST 322 (485)
T ss_pred HHhc--cccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCC-HHHHHHHHHHHHHHHHHHH
Confidence 3222 222356788999999999999999999999999999999999999999998866 6667777788889999999
Q ss_pred HHHHHHHhhhCCchhhHhHHHHHHHHHHHHHHHHhccCCC---CC---ccchh-cccccccccccccccccccCccchhh
Q 013992 330 IVSIYFIDRTGRKKLLVISLSGVILSLGVLSAVFHETTSH---SP---MVSAV-ETSHFSNLTCPDYSSAATADRWDCMK 402 (432)
Q Consensus 330 ~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (432)
+++.++.||.|||+.++.+..++.+..+++.......... .. +...+ ....+..+..+.--...+|++|.
T Consensus 323 ~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~--- 399 (485)
T KOG0569|consen 323 LVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQ--- 399 (485)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCc---
Confidence 9999999999999999999988887776665544322211 11 11111 11122222333333444677777
Q ss_pred hhccCCCCccccc
Q 013992 403 CLKASSPDCGFCA 415 (432)
Q Consensus 403 ~~r~~~~~~g~~~ 415 (432)
.-|+. +...+.
T Consensus 400 ~~R~a--a~s~~~ 410 (485)
T KOG0569|consen 400 SARSA--AQSVAT 410 (485)
T ss_pred cchHH--HHHHHH
Confidence 77777 555443
No 4
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=5.4e-35 Score=282.49 Aligned_cols=388 Identities=17% Similarity=0.220 Sum_probs=261.4
Q ss_pred CCCChhHHHHHHHHHHhhcccceeccccchhhhhhhhcc-ccc-hhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchH
Q 013992 23 SWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDF-KSV-DRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRT 100 (432)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~-~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~ 100 (432)
..-.+++++.+..++++.+.+++|...++.+.|.+..++ +.+ ..+..+.+++.+.+.++..+++++.|+++||+|||+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~ 87 (502)
T TIGR00887 8 APFGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKR 87 (502)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHH
Confidence 334567788888889999999999999999999887653 211 112223389999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCC------hhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHH
Q 013992 101 SILVADFLFFVGAVIMAAAPN------PGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLS 174 (432)
Q Consensus 101 ~l~~~~~~~~~~~~~~~~~~~------~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~ 174 (432)
++..+.++..++.++++++++ ++.++++|+++|++.|...+....++.|++|+++|++++++.+....+|..++
T Consensus 88 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g 167 (502)
T TIGR00887 88 VYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAG 167 (502)
T ss_pred HHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998876 78899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccC----------------------CCCchHHHHHhhHHHHHHHHHHHhhcCCCHHHHHHcCCHH-HHHHHHHH
Q 013992 175 YLINLAFTR----------------------APGTWRWMLGVAGIPALLQFILMLLLPESPRWLYRKGREE-EAQAILRK 231 (432)
Q Consensus 175 ~~i~~~l~~----------------------~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~ 231 (432)
+.++..+.. ...+||+.|.+.+++.++..+..+++||+|||+..+++.+ ++.+...+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~ 247 (502)
T TIGR00887 168 AIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSA 247 (502)
T ss_pred HHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHH
Confidence 888765431 0114999999988888887777888999999998877753 45555555
Q ss_pred hCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhccc---chhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCC
Q 013992 232 VYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTR---TVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGF 308 (432)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (432)
....+..++ .++..+ .+++ ++..+.+++++++++ +.++..+... ...+.+...++....+.|.++++.+.
T Consensus 248 ~~~~~~~~~-~~~~~~----~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~y~~~~~~p~i~~~~G~ 320 (502)
T TIGR00887 248 VLQVKIEAE-PDEVEK----ASTA-VEVPKASWSDFFTHFFKWRHGKHLLGTA-GSWFLLDIAFYGVNLNQKVILSAIGY 320 (502)
T ss_pred HhccccccC-cccccc----hhcc-ccchhhhHHHHHHHHhhhHHHHHHHHHH-HHHHHHHHHHHccccccHHHHHHHcC
Confidence 433211111 000000 0000 111123456666542 2222222212 22222333445666678888887665
Q ss_pred CchhH-----------HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHHHHHHHHHHhccCCCCCccchhc
Q 013992 309 ASNRT-----------ALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILSLGVLSAVFHETTSHSPMVSAVE 377 (432)
Q Consensus 309 ~~~~~-----------~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (432)
.+... .........++.+++.++.++++||+|||+.+..+..+..+++.++..................
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 400 (502)
T TIGR00887 321 SPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVL 400 (502)
T ss_pred CCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Confidence 43211 1112333445667788999999999999999888887777766655544322111111111111
Q ss_pred cccc-ccccccccccccccCccchhhhhccCCCCcccccccccccc
Q 013992 378 TSHF-SNLTCPDYSSAATADRWDCMKCLKASSPDCGFCASHSNKVK 422 (432)
Q Consensus 378 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~~~~~~~ 422 (432)
...+ .....+.......|.+|. +.|++ +.|+++.......
T Consensus 401 ~~~~~~~~~~~~~~~~~~E~~p~---~~R~~--~~g~~~~~~~~~~ 441 (502)
T TIGR00887 401 AQFFANFGPNATTFIVPGEVFPT---RYRST--AHGISAASGKAGA 441 (502)
T ss_pred HHHHHhcCCCchhhhhhhccCch---hHHHH--HHHHHHHHhhhHH
Confidence 1111 111222122223566666 99999 9999887766543
No 5
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=1.6e-34 Score=278.33 Aligned_cols=377 Identities=12% Similarity=0.005 Sum_probs=271.2
Q ss_pred hHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHH
Q 013992 28 YVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADF 107 (432)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~ 107 (432)
++|..+..++++.++..+|.++++..+|.+.+|+|.+..+. +|+.+.+.+++.++.++.|+++||+|||++++.+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~---~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~ 79 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNEL---LWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGT 79 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHH---HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 45678889999999999999999999999999999988888 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcC-CcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 013992 108 LFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEAS-PAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPG 186 (432)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~ 186 (432)
+..++++++++++|++.++++|+++|++.+...+.....+.+.+ |+++|+++++++.....+|..+||.+++++.+..+
T Consensus 80 ~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~g 159 (495)
T PRK14995 80 LFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFY 159 (495)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 99999999999999999999999999999998888888787776 67899999999999999999999999999999887
Q ss_pred chHHHHHhhHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHH------------HHhCCCC-chHHHH----HHHHHH
Q 013992 187 TWRWMLGVAGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAIL------------RKVYPAH-EVETEI----RDLKES 248 (432)
Q Consensus 187 ~wr~~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~------------~~~~~~~-~~~~~~----~~~~~~ 248 (432)
|||.|++....+++..++ .+++||+++.. +++.+...... +...... ...... ......
T Consensus 160 -wr~~f~i~~~~~~~~~~l~~~~l~~~~~~~--~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 236 (495)
T PRK14995 160 -WGSVFLINVPIVLVVMGLTARYVPRQAGRR--DQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLL 236 (495)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHhCCCCCCCC--CCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHH
Confidence 999999988777666555 56677764311 11111111100 0000000 000000 000000
Q ss_pred hHHHHHHccCccchhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHH
Q 013992 249 VDKEIEEEGSSEKINLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAG 328 (432)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (432)
......|.+.+++....+++|++.++...+..+.... .......+.|.|++...+.++.+++....+..++..++
T Consensus 237 ~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~ 311 (495)
T PRK14995 237 GLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMI-----TLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFS 311 (495)
T ss_pred HHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 0011122233344455788999887654444333222 45566778899999988888999999999999999999
Q ss_pred HHHHHHHHhhhCCchhhHhHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccccccccccccCccchhhhhccCC
Q 013992 329 SIVSIYFIDRTGRKKLLVISLSGVILSLGVLSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASS 408 (432)
Q Consensus 329 ~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 408 (432)
.++.|++.||+++|+.+..+..+..++..++.......+.+......++.+++.+......... ....+|++.++.
T Consensus 312 ~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~---~~~~~~~~~~g~- 387 (495)
T PRK14995 312 GPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSA---IMAAAPPEKAAA- 387 (495)
T ss_pred HHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHH---HHhcCCHHhcch-
Confidence 9999999999999998888877776666555443222222222222333333333322222222 223456688888
Q ss_pred CCcccccccccc
Q 013992 409 PDCGFCASHSNK 420 (432)
Q Consensus 409 ~~~g~~~~~~~~ 420 (432)
+.|+.+...+.
T Consensus 388 -~~~~~~~~~~l 398 (495)
T PRK14995 388 -AGAIETMAYEL 398 (495)
T ss_pred -HHHHHHHHHHH
Confidence 77776655444
No 6
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=1e-33 Score=273.17 Aligned_cols=376 Identities=33% Similarity=0.546 Sum_probs=264.5
Q ss_pred ChhHHHHHHHHHHhhcccceeccccchhhhhhhhcc--------ccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcccc
Q 013992 26 NPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDF--------KSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFG 97 (432)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--------~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G 97 (432)
.++..+.....+++.+.++++...+++..|.+.+++ +.++.+. +++.+++.++..++++++|+++||+|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~s~~~ig~~~~~~~~G~l~dr~G 83 (479)
T PRK10077 7 SSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLL---GFCVASALIGCIIGGALGGYCSNRFG 83 (479)
T ss_pred chHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHH---HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 345666777777888999999999999999998887 5555566 99999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHh------------CChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHH
Q 013992 98 RRTSILVADFLFFVGAVIMAAA------------PNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGF 165 (432)
Q Consensus 98 rr~~l~~~~~~~~~~~~~~~~~------------~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~ 165 (432)
||++++.+.+++.++.+.++++ +++..++++|+++|++.|...+...++++|++|+++|++++++.+.
T Consensus 84 rr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~ 163 (479)
T PRK10077 84 RRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQF 163 (479)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHH
Confidence 9999999999999998887763 2256788999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcc--------CCCCchHHHHHhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCc
Q 013992 166 LITSGQFLSYLINLAFT--------RAPGTWRWMLGVAGIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHE 237 (432)
Q Consensus 166 ~~~~g~~i~~~i~~~l~--------~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (432)
+..+|..+++.++..+. +..+ ||+.|++.+++.++..+..+++||+|+++.++++.++.....++.....+
T Consensus 164 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~g-Wr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~ 242 (479)
T PRK10077 164 AIIFGQLVVYFVNYFIARSGDASWLNTDG-WRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTL 242 (479)
T ss_pred HHHHHHHHHHHHHHHHhccCcccccccCC-hHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChh
Confidence 99999999888776543 2334 99999998888877776678899999998888887777666666554333
Q ss_pred hHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHH
Q 013992 238 VETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLL 317 (432)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (432)
..+..++..+.. +++++ ..+..+.. ........+....+.+..+++...++.|.+.++.+.. .......
T Consensus 243 ~~~~~~~~~~~~----~~~~~----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~-~~~~~~~ 311 (479)
T PRK10077 243 ATQALQEIKHSL----DHGRK----TGGKLLMF--GVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGAS-TDIALLQ 311 (479)
T ss_pred HHHHHHHHHHHH----HHhhh----hhhhhcch--hHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCC-CchHHHH
Confidence 222111111110 00000 00111111 1112222233334455555666777888888776544 4445566
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHHHHHHHHHHhccCCCCCccchh-ccccccc-cccccccccccc
Q 013992 318 SLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILSLGVLSAVFHETTSHSPMVSAV-ETSHFSN-LTCPDYSSAATA 395 (432)
Q Consensus 318 ~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~ 395 (432)
.....+..+++.++.++++||++||+.+..+..+..++..++................+ ..+.+.. ...+.......|
T Consensus 312 ~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 391 (479)
T PRK10077 312 TIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSE 391 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHh
Confidence 66778888999999999999999999999999888888777665433222221111111 1111111 111222333345
Q ss_pred CccchhhhhccCCCCccccccccccc
Q 013992 396 DRWDCMKCLKASSPDCGFCASHSNKV 421 (432)
Q Consensus 396 ~~~~~~~~~r~~~~~~g~~~~~~~~~ 421 (432)
.+ |++.|++ +.|++++..+..
T Consensus 392 ~~---p~~~r~~--~~g~~~~~~~~g 412 (479)
T PRK10077 392 IF---PNAIRGK--ALAIAVAAQWIA 412 (479)
T ss_pred hC---ChhHHHH--HHHHHHHHHHHH
Confidence 54 4599999 999876654443
No 7
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=3.7e-34 Score=271.71 Aligned_cols=348 Identities=18% Similarity=0.161 Sum_probs=238.4
Q ss_pred CChhHHHHHHHHHHhhcccceeccccchhhhhhhhccc---cchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHH
Q 013992 25 KNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFK---SVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTS 101 (432)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~ 101 (432)
++++++..+...+++.+++++|...++...|.+.++++ .+..+..+.+.+.+...++..++++++|+++||+|||++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~ 95 (432)
T PRK10406 16 DTRRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKS 95 (432)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHH
Confidence 34456666777778889999999999999999999985 333333222444455566666999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCChh--------HHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHH
Q 013992 102 ILVADFLFFVGAVIMAAAPNPG--------ALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFL 173 (432)
Q Consensus 102 l~~~~~~~~~~~~~~~~~~~~~--------~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i 173 (432)
+..+.++++++++++++++++. .+++.|+++|++.|..++...+++.|++|+++|+++.++...+...|..+
T Consensus 96 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~ 175 (432)
T PRK10406 96 MLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLL 175 (432)
T ss_pred HHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999875 58899999999999999999999999999999999999988888888888
Q ss_pred HHHHHhhccC--------CCCchHHHHHhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHH
Q 013992 174 SYLINLAFTR--------APGTWRWMLGVAGIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDL 245 (432)
Q Consensus 174 ~~~i~~~l~~--------~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (432)
++.+...+.. ..+ ||+.|++.+++.++.......+||+|++..+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~g-Wr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~--------------------------- 227 (432)
T PRK10406 176 ALLVVVVLQQTLEDAELREWG-WRIPFALGAVLAVVALWLRRQLDETSQQETR--------------------------- 227 (432)
T ss_pred HHHHHHHHHHhCCHHHHhccc-hHHHHHHHHHHHHHHHHHHhcCCCCchHHHh---------------------------
Confidence 8776554431 344 9999999888777665555567777542100
Q ss_pred HHHhHHHHHHccCccchhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHH
Q 013992 246 KESVDKEIEEEGSSEKINLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLN 325 (432)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (432)
++ ++..+.++++|+++.+...+... +.....++....|.|.|+++..+.+..+.+.......+..
T Consensus 228 --------~~---~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~ 292 (432)
T PRK10406 228 --------AL---KEAGSLKGLWRNRRAFIMVLGFT----AAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVF 292 (432)
T ss_pred --------hh---cccccHHHHHhhHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 00 00123566777766654332211 1212345667788999987765565666777777667777
Q ss_pred HHHHHHHHHHHhhhCCchhhHhHHHHHHHHHHHHHHHHhccCCCCCccchhccc-ccccccccccccccccCccchhhhh
Q 013992 326 AAGSIVSIYFIDRTGRKKLLVISLSGVILSLGVLSAVFHETTSHSPMVSAVETS-HFSNLTCPDYSSAATADRWDCMKCL 404 (432)
Q Consensus 326 ~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (432)
.++.++.|+++||++||+.+..+..+..+....+.............+..+... ..............+|.+|. +.
T Consensus 293 ~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~---~~ 369 (432)
T PRK10406 293 MLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPA---QV 369 (432)
T ss_pred HHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---Cc
Confidence 888889999999999998877665543333222221111111111111111111 11111111222333555555 99
Q ss_pred ccCCCCcccccccccc
Q 013992 405 KASSPDCGFCASHSNK 420 (432)
Q Consensus 405 r~~~~~~g~~~~~~~~ 420 (432)
|++ +.|++++..+.
T Consensus 370 r~t--~~g~~~~~g~~ 383 (432)
T PRK10406 370 RAL--GVGLSYAVANA 383 (432)
T ss_pred cch--hhhHHHHHHHH
Confidence 999 99999876554
No 8
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=2.4e-33 Score=271.00 Aligned_cols=383 Identities=39% Similarity=0.576 Sum_probs=287.5
Q ss_pred hhHHHHHHHHHHhhccccee--ccccchhhhhhhhccccchhhh----HHHHHHHHHHHHHHHHHHHhhhhhhccccchH
Q 013992 27 PYVLRLAFSAGIGGLLFGYD--TGVISGALLYIRDDFKSVDRKT----LLQESIVSMAVAGAIIGAAIGGWMNDRFGRRT 100 (432)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~----~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~ 100 (432)
+..........++.+..+++ ....++....+.++........ ...+++.+.+.++..+++++.|+++|++|||+
T Consensus 41 ~~~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~ 120 (513)
T KOG0254|consen 41 PFVILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKK 120 (513)
T ss_pred eehHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 33444444555555666665 5666777777766543222221 23389999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhh
Q 013992 101 SILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLA 180 (432)
Q Consensus 101 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~ 180 (432)
.++.+.+.+.++.+++++++|+++++++|+++|+|.|........+++|..|++.||...+..+....+|..++..++..
T Consensus 121 ~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~ 200 (513)
T KOG0254|consen 121 TLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYG 200 (513)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999776666
Q ss_pred ccCCCCchHHHHHhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCC--CCchHHHHHHHHHHhHHHHHHccC
Q 013992 181 FTRAPGTWRWMLGVAGIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYP--AHEVETEIRDLKESVDKEIEEEGS 258 (432)
Q Consensus 181 l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 258 (432)
..+...+||..+.+..+++++..+..+++||+|+|+.++++.+++...+.++.+ ..+.+.+.+..+. ....+....
T Consensus 201 ~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~--~~~~~~~~~ 278 (513)
T KOG0254|consen 201 TSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKI--KLLVEAEVA 278 (513)
T ss_pred hccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHH--HHHHhhhcc
Confidence 544312499999999999998888888899999999999999999999999887 3444444433331 111111111
Q ss_pred ccchhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 013992 259 SEKINLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDR 338 (432)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 338 (432)
+.+....++++ |..+++.+.++.+..++++.++....+|.+.+++..+..++. .......++..+++.++..++.||
T Consensus 279 ~~~~~~~~l~~-~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~--~~~~~~~~~v~~~~t~~~~~lvd~ 355 (513)
T KOG0254|consen 279 EGKASWGELFS-PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT--FLASIILGVVNFLGTLVATYLVDR 355 (513)
T ss_pred cccccHHHhcC-cchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch--HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11113445555 778888888899999999999999999999999998887654 455666677788899999999999
Q ss_pred hCCchhhHhHHHHHHHHHHHHHHHHhccCCCC------Cccchhcc----cccccccccccccccccCccchhhhhccCC
Q 013992 339 TGRKKLLVISLSGVILSLGVLSAVFHETTSHS------PMVSAVET----SHFSNLTCPDYSSAATADRWDCMKCLKASS 408 (432)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 408 (432)
+|||+.++.+...+.++++++.........+. ..+..... ..+.....+.--...+|.+|. +.|+.
T Consensus 356 ~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~---~~r~~- 431 (513)
T KOG0254|consen 356 FGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPL---RLRSK- 431 (513)
T ss_pred hccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcH---hHHhh-
Confidence 99999999999999999998887766543321 11111111 111111111111244677777 99999
Q ss_pred CCccccccccc
Q 013992 409 PDCGFCASHSN 419 (432)
Q Consensus 409 ~~~g~~~~~~~ 419 (432)
+.+++.+.+.
T Consensus 432 -~~s~~~~~n~ 441 (513)
T KOG0254|consen 432 -GASLAVAVNW 441 (513)
T ss_pred -hHHHHHHHHH
Confidence 8887765543
No 9
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=1.8e-33 Score=271.59 Aligned_cols=386 Identities=37% Similarity=0.568 Sum_probs=263.9
Q ss_pred CChhHHHHHHHHHHhhcccceeccccchhhhhhhhccccc--------hhhhHHHHHHHHHHHHHHHHHHHhhhhhhccc
Q 013992 25 KNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSV--------DRKTLLQESIVSMAVAGAIIGAAIGGWMNDRF 96 (432)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--------~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~ 96 (432)
.+++.+....++.++.++..++...+++.+|.+..+++.+ ..+. +++.+++.++..+++++.|+++||+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~g~l~d~~ 98 (481)
T TIGR00879 22 TYWKVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLW---GLVVSIFLVGGFIGALFAGWLSDRF 98 (481)
T ss_pred ccHHHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHH---HHHHHHHHHHHHHHHHHhhHhhhhh
Confidence 3344555555666677888899999999999998888776 4555 9999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhC---ChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHH
Q 013992 97 GRRTSILVADFLFFVGAVIMAAAP---NPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFL 173 (432)
Q Consensus 97 Grr~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i 173 (432)
|||++++.+.++..++.+++.+.. +++.+++.|+++|++.+...+....++.|++|+++|++++++.+.+..+|..+
T Consensus 99 grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 178 (481)
T TIGR00879 99 GRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILV 178 (481)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHH
Confidence 999999999999999999986644 45589999999999999999999999999999999999999999999999999
Q ss_pred HHHHH---hhccCCCCchHHHHHhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhH
Q 013992 174 SYLIN---LAFTRAPGTWRWMLGVAGIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVD 250 (432)
Q Consensus 174 ~~~i~---~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (432)
++.++ ....+..+ ||+.|++.++..++..+..+++||+|++...+++.++..+..++.....+.+...........
T Consensus 179 ~~~~~~~~~~~~~~~~-w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (481)
T TIGR00879 179 AYGFGSGKVSLNNTLG-WRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELID 257 (481)
T ss_pred HHHHHHHhhcCCCCcc-HHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHH
Confidence 99999 66655555 999999977777776666788899998877777766655554443332221111111001000
Q ss_pred HHHHHccCccchhHHHhhcccc-hhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHH
Q 013992 251 KEIEEEGSSEKINLVKLLKTRT-VRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGS 329 (432)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (432)
...+.+.+..+....+.++..+ .....+.......+..........++.|.+.++.+.+. ...+.......++.+++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~ 336 (481)
T TIGR00879 258 IKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVST-DHAFLVSIIVGAVNFAFT 336 (481)
T ss_pred HHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCc-hHHHHHHHHHHHHHHHHH
Confidence 1111111111111233333211 22233333444444444455666778888888776554 667788888888899999
Q ss_pred HHHHHHHhhhCCchhhHhHHHHHHHHHHHHHHHHhccCC-------CCCc-cchhcccccccccccccccccccCccchh
Q 013992 330 IVSIYFIDRTGRKKLLVISLSGVILSLGVLSAVFHETTS-------HSPM-VSAVETSHFSNLTCPDYSSAATADRWDCM 401 (432)
Q Consensus 330 ~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (432)
++.+++.||++||+.+..+..+..+++.++......... .... ...+..+.+.....+.......+.. |
T Consensus 337 ~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---p 413 (481)
T TIGR00879 337 FVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIF---P 413 (481)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccC---C
Confidence 999999999999999988877777766665532211111 1111 1111111122122222222324444 4
Q ss_pred hhhccCCCCcccccccccc
Q 013992 402 KCLKASSPDCGFCASHSNK 420 (432)
Q Consensus 402 ~~~r~~~~~~g~~~~~~~~ 420 (432)
++.|++ +.|+.....+.
T Consensus 414 ~~~~~~--~~~~~~~~~~l 430 (481)
T TIGR00879 414 LSLRPK--GISIAVAANWL 430 (481)
T ss_pred hHHHHH--HHHHHHHHHHH
Confidence 588999 88887665554
No 10
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=3.9e-34 Score=275.51 Aligned_cols=356 Identities=16% Similarity=0.164 Sum_probs=239.4
Q ss_pred HHHHHHHHHhhcccceeccccchhhhhhhhccccchhhh--HHHHH-HHHHHHHHHHHHHHhhhhhhccccchHHHHHHH
Q 013992 30 LRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKT--LLQES-IVSMAVAGAIIGAAIGGWMNDRFGRRTSILVAD 106 (432)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~-~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~ 106 (432)
++.+...+++.+++++|...++...|.+.++++.+.++. ....+ ..++.++++.+++++.|+++||+|||+++..+.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 345666778889999999999999999999986443221 11122 257888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCChhH--------HHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 013992 107 FLFFVGAVIMAAAPNPGA--------LITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLIN 178 (432)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~--------~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~ 178 (432)
++++++++++++++|+++ ++++|+++|++.|..++...+++.|++|+++|+++.++...+..+|..+++.+.
T Consensus 95 ~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~ 174 (490)
T PRK10642 95 VIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVV 174 (490)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999875 889999999999999999999999999999999999999988888888887665
Q ss_pred hhcc--------CCCCchHHHHHhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhH
Q 013992 179 LAFT--------RAPGTWRWMLGVAGIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVD 250 (432)
Q Consensus 179 ~~l~--------~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (432)
..+. ...+ ||+.|++.+++.++..++...+||+|+|..++++.++..
T Consensus 175 ~~~~~~~~~~~~~~~g-WR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~------------------------ 229 (490)
T PRK10642 175 VLISTIVGEANFLDWG-WRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGD------------------------ 229 (490)
T ss_pred HHHHHhcCHHHhcCcc-HHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhc------------------------
Confidence 4432 1345 999999987766666666677899988654322111100
Q ss_pred HHHHHccCccchhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHH
Q 013992 251 KEIEEEGSSEKINLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSI 330 (432)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (432)
.+...+.++.+.++++++. ++....... ..+.....++....|.|.|+++..+.+............++.+++.+
T Consensus 230 --~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~ 304 (490)
T PRK10642 230 --REGLQDGPKVSFKEIATKH--WRSLLTCIG-LVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQP 304 (490)
T ss_pred --cccccccccCCHHHHHHHh--HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0000001122344555431 222222222 12223345667778999999776555566666677777788899999
Q ss_pred HHHHHHhhhCCchhhHhHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccccccccccccCccchhhhhccCCCC
Q 013992 331 VSIYFIDRTGRKKLLVISLSGVILSLGVLSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPD 410 (432)
Q Consensus 331 ~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 410 (432)
+.|+++||+|||+.+..+.....+....+................++.+++............++.+ |++.|++ +
T Consensus 305 ~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~---p~~~Rg~--~ 379 (490)
T PRK10642 305 VMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMF---PTHIRYS--A 379 (490)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCccchH--H
Confidence 9999999999999887776544433222222111111111111112222221122222233334544 4599999 8
Q ss_pred cccccccccc
Q 013992 411 CGFCASHSNK 420 (432)
Q Consensus 411 ~g~~~~~~~~ 420 (432)
.|+..+....
T Consensus 380 ~g~~~~~~~~ 389 (490)
T PRK10642 380 LAAAFNISVL 389 (490)
T ss_pred HHHHHHHHHH
Confidence 8876655443
No 11
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=1.3e-33 Score=265.88 Aligned_cols=368 Identities=16% Similarity=0.104 Sum_probs=251.4
Q ss_pred hhHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHH
Q 013992 27 PYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVAD 106 (432)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~ 106 (432)
+.+|+....+++..+++++|+...+...|.+.+|+|.++.+. +++.+++.+++.+++++.|+++||+|||+++..+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~---g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~ 80 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMF---GLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIM 80 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHH---HHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHH
Confidence 346778888888889999999999999999999999999888 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccC---
Q 013992 107 FLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTR--- 183 (432)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~--- 183 (432)
++++++++++++++|++.+++.|+++|++.+...+....++.|++|+++|++++++++.+..+|..+++.+++++.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 160 (412)
T TIGR02332 81 VLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDG 160 (412)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988764
Q ss_pred ---CCCchHHHHHhhHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCC-chHHHHHHHHHHhHHHHHHccC
Q 013992 184 ---APGTWRWMLGVAGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAH-EVETEIRDLKESVDKEIEEEGS 258 (432)
Q Consensus 184 ---~~~~wr~~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 258 (432)
..+ ||+.|++.+++.++..++ ++++||+|+... .-+.++.+...+...... +.++ .+...++.+.
T Consensus 161 ~~~~~g-wr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~-~l~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 230 (412)
T TIGR02332 161 LMALKG-WQWLFLLEGFPSVILGVMTWFWLDDSPDKAK-WLDEEDKKALKEMIDNDQLTLEQ--------PEGAFAHAAM 230 (412)
T ss_pred CCCccc-hhHHHHHHHHHHHHHHHHHhhccCCCcccCC-CCCHHHHHHHHHHHHhccccccc--------cccccccccc
Confidence 234 999999988877665544 667788874100 000111111111100000 0000 0000000000
Q ss_pred ccchhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcC-CCchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013992 259 SEKINLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSG-FASNRTALLLSLVTSGLNAAGSIVSIYFID 337 (432)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 337 (432)
.....+++++ ++.++... ..+++....++.+..|.|.++++.+ +.+...++.......++.+++.++.|+++|
T Consensus 231 ~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~d 304 (412)
T TIGR02332 231 PQRSMLREIF-TPAIMLYT-----LAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSD 304 (412)
T ss_pred cHHHHHHHhc-ChHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhc
Confidence 0011223333 45554322 2333444467778889999998853 455677788888899999999999999999
Q ss_pred hhCCchhh-HhHHHHHHHHHHHHHHHHhccCCCCCccchhccccccc-ccccccccccccCccchhhhhccCCCCccccc
Q 013992 338 RTGRKKLL-VISLSGVILSLGVLSAVFHETTSHSPMVSAVETSHFSN-LTCPDYSSAATADRWDCMKCLKASSPDCGFCA 415 (432)
Q Consensus 338 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~ 415 (432)
|+++|+.. ........++. ++... .... ......+....++. ...+.+.....+ ..|++.|++ +.|+.+
T Consensus 305 r~~~r~~~~~~~~~~~~~~~-~~~~~--~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~--a~g~~~ 375 (412)
T TIGR02332 305 RLKERKHHTALPYLFAAAGW-LLASA--TDHN-LIQLLGIIMASMGSFSAMAIFWTTPDQ---SISLQARAI--AIAVIN 375 (412)
T ss_pred ccCccHHHHHHHHHHHHHHH-HHHHh--cCCH-HHHHHHHHHHHHHhhhhhhHHHhhccc---ccchHHHHH--HHHHHH
Confidence 99977753 33333333322 22211 1111 11111111111111 111111122123 345589999 999988
Q ss_pred ccccccc
Q 013992 416 SHSNKVK 422 (432)
Q Consensus 416 ~~~~~~~ 422 (432)
...+...
T Consensus 376 ~~~~~g~ 382 (412)
T TIGR02332 376 ATGNIGS 382 (412)
T ss_pred Hhhhhhh
Confidence 8777643
No 12
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.1e-34 Score=255.13 Aligned_cols=286 Identities=21% Similarity=0.237 Sum_probs=249.4
Q ss_pred hhHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHH
Q 013992 27 PYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVAD 106 (432)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~ 106 (432)
+..+..++.+.++.|..+.+...+...+|++.+|+|.+..+. |++.+.|.+++.++.|+...+.||+.||++++..+
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~a---G~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l 85 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAA---GQLITAYALGVALGAPLLALLTGRLERRRLLLGLL 85 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHH
Confidence 334556677777888889999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 013992 107 FLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPG 186 (432)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~ 186 (432)
.++.++++++++++||+.++++|++.|+..|..++...++..+..|+++|++++++...+.++...+|.+++.++.+..|
T Consensus 86 ~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~G 165 (394)
T COG2814 86 ALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFG 165 (394)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred chHHHHHhhHHHHHHHHHH-HhhcC-CCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhH
Q 013992 187 TWRWMLGVAGIPALLQFIL-MLLLP-ESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINL 264 (432)
Q Consensus 187 ~wr~~f~~~~~~~~~~~~~-~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (432)
||+.|+..+.++++..+. +..+| .++ +++++.+..+.
T Consensus 166 -WR~~F~~ia~l~ll~~~~~~~~lP~~~~----------------------------------------~~~~~~~~~~~ 204 (394)
T COG2814 166 -WRATFLAIAVLALLALLLLWKLLPPSEI----------------------------------------SGSLPGPLRTL 204 (394)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhCCCccC----------------------------------------CCCCCcchhHH
Confidence 999999999988888777 77788 110 11222233456
Q ss_pred HHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchh
Q 013992 265 VKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKL 344 (432)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 344 (432)
.+.+|+|+.+...+...+... +.+....|...++++..+.+.....+....++++.++|+.++|++.|| +.|+.
T Consensus 205 ~~~l~~p~v~~~l~~t~l~~~-----g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~ 278 (394)
T COG2814 205 LRLLRRPGVLLGLLATFLFMT-----GHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRA 278 (394)
T ss_pred HHHhcCchHHHHHHHHHHHHc-----chhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhH
Confidence 789999999886665544433 777888888888888888788899999999999999999999999999 88888
Q ss_pred hHhHHHHHHHHHHHHHHH
Q 013992 345 LVISLSGVILSLGVLSAV 362 (432)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~ 362 (432)
+.....+..+....+.+.
T Consensus 279 l~~~~~l~a~~~l~l~~~ 296 (394)
T COG2814 279 LIAALLLLALALLALTFT 296 (394)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 888777777766665554
No 13
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=2.9e-33 Score=271.61 Aligned_cols=349 Identities=21% Similarity=0.288 Sum_probs=250.1
Q ss_pred hhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHhh
Q 013992 52 GALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVF 131 (432)
Q Consensus 52 ~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 131 (432)
+..|.+.+|+|+++++.++.++..+++.++..++.++.|+++||+|||++++.+.++.+++.++.++++|++.+++.|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 56788999999996666666999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHHHhhcCC
Q 013992 132 VGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFILMLLLPE 211 (432)
Q Consensus 132 ~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e 211 (432)
.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++..+. +||+.|++.+++.++..+..+++||
T Consensus 190 ~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~----~wr~~~~~~~i~~~~~~~~~~~~~e 265 (505)
T TIGR00898 190 VGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP----DWRWLQLAVSLPTFLFFLLSWFVPE 265 (505)
T ss_pred HHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999999999887664 4999999999888887777788999
Q ss_pred CHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHHHHHHHHHHHHhhhcc
Q 013992 212 SPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRGLIAGVGLQVFQQFVG 291 (432)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (432)
+|+|+..+++.+++.+..++..+.+......+......++ ++.++.++...++++++|+++...+.....++.
T Consensus 266 sp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----- 338 (505)
T TIGR00898 266 SPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEK--DLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFT----- 338 (505)
T ss_pred ChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhh--hhhhccCCCcHHHHhCChHHHHHHHHHHHHHHH-----
Confidence 9999999999888877776654333221111111110011 111111234678899999888766654443331
Q ss_pred hHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHHHHHHHHHHhccCCCCC
Q 013992 292 INTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILSLGVLSAVFHETTSHSP 371 (432)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (432)
.....+..+.+....+.+ ........++..+++.++.+++.||+|||+.+.++..+.+++++++...... ..+..
T Consensus 339 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~-~~~~~ 413 (505)
T TIGR00898 339 TAFSYYGLVLDLGNLGGN----IYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVD-LYFLR 413 (505)
T ss_pred HHHHHHHHhccccccCCC----hHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCC-chHHH
Confidence 111112222233333322 2344445667788999999999999999999988887777776655543211 11111
Q ss_pred ccchhcccccccccccccccccccCccchhhhhccCCCCccccccccccc
Q 013992 372 MVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCASHSNKV 421 (432)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~~~~~~ 421 (432)
....++.+++.............|.+|+ +.|++ +.|+++......
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~---~~r~~--~~g~~~~~~~ig 458 (505)
T TIGR00898 414 TALAVLGKFGITSAFQMVYLYTAELYPT---VVRNL--GVGVCSTMARVG 458 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccH---HHHhh--hHhHHHHHHHHH
Confidence 1112222222222222222333555555 99999 999988776544
No 14
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=1.3e-32 Score=259.86 Aligned_cols=370 Identities=17% Similarity=0.155 Sum_probs=253.5
Q ss_pred CChhHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHH
Q 013992 25 KNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILV 104 (432)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~ 104 (432)
.++++|+.+..++++.+.++++....++..|.+.+++|.++.+. +++.+.+.++..+++++.|.++||+|||++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~---g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~ 82 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDA---ASLISAALISRWFGALMFGLWGDRYGRRLPMVT 82 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhH---HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 45677888888999999999999999999999999999999888 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCC
Q 013992 105 ADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRA 184 (432)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~ 184 (432)
+.++.+++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|+++.++...+..+|..+++.+++.+.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~ 162 (405)
T TIGR00891 83 SIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPV 162 (405)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888765
Q ss_pred CC-chHHHHHhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchh
Q 013992 185 PG-TWRWMLGVAGIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKIN 263 (432)
Q Consensus 185 ~~-~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (432)
.+ +||+.|++.++..++..+....+||++++..++++.++..+..++..+... .. ++..++....
T Consensus 163 ~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~-~~~~~~~~~~ 228 (405)
T TIGR00891 163 WGDGWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEH-------------RI-ANIVMTLAAA 228 (405)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccch-------------hh-hhhhhhhhHH
Confidence 42 499999987776666666666788886544322221111111111000000 00 0000000000
Q ss_pred HHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCch
Q 013992 264 LVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKK 343 (432)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 343 (432)
.++. .++.+........ ..............+.|.|+.+..+.+..+.+.......++.+++.++.+++.||++||+
T Consensus 229 ~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~ 305 (405)
T TIGR00891 229 MVQS--AGKRWPTFVYLVV-LVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRK 305 (405)
T ss_pred hhhh--hhhhhHHHHHHHH-HHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchh
Confidence 1111 1111111111111 111111223445567788887666666778888888889999999999999999999999
Q ss_pred hhHhHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccccccccccccCccchhhhhccCCCCccccccccccc
Q 013992 344 LLVISLSGVILSLGVLSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCASHSNKV 421 (432)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~~~~~~ 421 (432)
.+.++.....+....+... ..+.+...+.....+.+.............+ ..|++.|++ ..|+.+...+..
T Consensus 306 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~g~~~~~~~~g 376 (405)
T TIGR00891 306 AYVCSLLAGQLLIIPVFAI--GANVAVLGLGLFFQQMLVQGIWGILPKHLGE---YFPTDQRAA--GLGFTYQLGNLG 376 (405)
T ss_pred hhHHHHHHHHHHHHHHHHh--CCchHHHHHHHHHHHHHHccchhhHHHHHhh---hCCcchhHH--HhhHHHHHHHHH
Confidence 8887765543322222111 2222221121122222222222222223334 445589999 888876655443
No 15
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=3.8e-34 Score=274.22 Aligned_cols=362 Identities=14% Similarity=0.001 Sum_probs=249.7
Q ss_pred hhHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHH
Q 013992 27 PYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVAD 106 (432)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~ 106 (432)
+..+..+..++++++..+.++..+++..|.+.+|+|.++.+. +++.+.+.+++.+++++.|+++||+|||+++..+.
T Consensus 25 ~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~---g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~ 101 (467)
T PRK09556 25 KPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTEL---GMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLL 101 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHH---HHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHH
Confidence 445667778888888899999999999999999999998888 99999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHH-----hCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhc
Q 013992 107 FLFFVGAVIMAA-----APNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAF 181 (432)
Q Consensus 107 ~~~~~~~~~~~~-----~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l 181 (432)
++++++.++.+. ++|++.+++.|+++|++.+...+...+++.||+|+++|+++++++..+..+|.++++.+..++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~ 181 (467)
T PRK09556 102 ILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWG 181 (467)
T ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHH
Confidence 888887776655 689999999999999999999999999999999999999999999999999999999988766
Q ss_pred cCCC--CchHHHHHhhHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccC
Q 013992 182 TRAP--GTWRWMLGVAGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGS 258 (432)
Q Consensus 182 ~~~~--~~wr~~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (432)
.+.. ++||..|.+.+++.++..++ +++.+|+|+..... +.++ .. ... ... +++.+++++
T Consensus 182 ~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~-~~~~---~~---~~~--~~~---------~~~~~~~~~ 243 (467)
T PRK09556 182 ANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWG-KAEE---IF---GEP--ISE---------EDKETESTD 243 (467)
T ss_pred HHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCC-Chhh---cc---cCc--cch---------hhhcccccc
Confidence 5532 24999998888777666555 45556665421100 1111 00 000 000 000000000
Q ss_pred cc-ch-hHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 013992 259 SE-KI-NLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFI 336 (432)
Q Consensus 259 ~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 336 (432)
.. .. ..++.++++.+|...+..+ +.+..+.....|.|.|+++..+.+..+++.......++.+++.++.|+++
T Consensus 244 ~~~~~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~ls 318 (467)
T PRK09556 244 MTKWQIFVEYVLKNPVIWLLCFANI-----FLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLS 318 (467)
T ss_pred CcHHHHHHHHHHcChHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 11 1223678888776444332 22334566788999999887777778888888888889999999999999
Q ss_pred hhhCCchhhHhHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccccccccccccCccchhhhhccCCCCcccccc
Q 013992 337 DRTGRKKLLVISLSGVILSLGVLSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCAS 416 (432)
Q Consensus 337 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~ 416 (432)
||+++|+.......+..++..++... ...+.....+..+..+.+............. +..|++.|++ +.|+.+.
T Consensus 319 Dr~g~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~---~~~p~~~~g~--a~gi~~~ 392 (467)
T PRK09556 319 DLANGRRALVACIALALIIFTLGVYQ-HATSEYMYLASLFALGFLVFGPQLLIGVAAV---GFVPKKAIGV--ANGIKGT 392 (467)
T ss_pred HHHCCCchHHHHHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHHHHHhhHHHHHHHHHH---hhcchhhHHH--HHHHHHH
Confidence 99999887765544443332222221 1112111112222222211111111111222 4555699999 9998766
Q ss_pred cccc
Q 013992 417 HSNK 420 (432)
Q Consensus 417 ~~~~ 420 (432)
..+.
T Consensus 393 ~g~l 396 (467)
T PRK09556 393 FAYL 396 (467)
T ss_pred HHHH
Confidence 6554
No 16
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=2e-32 Score=260.16 Aligned_cols=355 Identities=19% Similarity=0.158 Sum_probs=252.8
Q ss_pred ChhHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHH
Q 013992 26 NPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVA 105 (432)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~ 105 (432)
++++++.+..+.++.+.++++.....+..|.+.+++|.++.+. +++.+++.++..+++++.|+++||+|||+++..+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~---~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~ 89 (426)
T PRK12307 13 TRPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEG---AFLATAAFIGRPFGGALFGLLADKFGRKPLMMWS 89 (426)
T ss_pred CHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHH
Confidence 3566777778888888999999999999999999999998888 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 013992 106 DFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAP 185 (432)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~ 185 (432)
.++.+++.++++++++++.++++|+++|++.+...+....++.|++|+++|+++.++...+..+|..+++.+.+.+.+..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~ 169 (426)
T PRK12307 90 IVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAY 169 (426)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888877
Q ss_pred CchHHHHHhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHH
Q 013992 186 GTWRWMLGVAGIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLV 265 (432)
Q Consensus 186 ~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (432)
+ ||+.|++.++..++........||++++..++.+.+ .+ +.+...+......+
T Consensus 170 ~-w~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~------------~~--------------~~~~~~~~~~~~~~ 222 (426)
T PRK12307 170 G-WRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLSGK------------GK--------------HSQSAWSVFSLSMK 222 (426)
T ss_pred C-HHHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhhcc------------cc--------------ccccchhhhhHHHH
Confidence 7 999998865544433333333566644321110000 00 00000001122456
Q ss_pred HhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhh
Q 013992 266 KLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLL 345 (432)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 345 (432)
+.++++.++........ .+..+...+.+..+.|.|+++.+ .++...+.......++.++++++.|++.||++||+.+
T Consensus 223 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~ 299 (426)
T PRK12307 223 GLFNRAQFPLTLCVFIV--LFSIFGANWPIFGLLPTYLAGEG-FDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTF 299 (426)
T ss_pred HHHhhchHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 77888877654432221 12222233445667888988764 4466677777788889999999999999999999988
Q ss_pred HhHHHHHHHHHHHHHHHHhccCCCCCccchhcccc--cccccccccccccccCccchhhhhccCCCCccccccccccc
Q 013992 346 VISLSGVILSLGVLSAVFHETTSHSPMVSAVETSH--FSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCASHSNKV 421 (432)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~~~~~~ 421 (432)
..+..+..+....+.... . ... ..+..+..+. .............. +..|++.|++ +.|++.+..+..
T Consensus 300 ~~~~~~~~~~~~~~~~~~-~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~p~~~~g~--~~g~~~~~~~~~ 369 (426)
T PRK12307 300 SIGLLMSFLFIFPLFRIP-Q-DNY-LLLGACLFGLMATNVGVGGLVPKFLY---DYFPLEVRGL--GTGLIYNLAATS 369 (426)
T ss_pred HHHHHHHHHHHHHHHHHc-c-ccH-HHHHHHHHHHHHhcccHhHHHHHHHH---HhCcHHHHhh--hhhHHHHHHhHH
Confidence 877766655544333221 1 111 1111111111 11111111122223 3455599999 999876665543
No 17
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=1e-32 Score=261.92 Aligned_cols=285 Identities=14% Similarity=0.044 Sum_probs=218.7
Q ss_pred hhHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHH
Q 013992 27 PYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVAD 106 (432)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~ 106 (432)
++++......++..+..+++...++..+|.+.+++|.+..+. +++.+.+.+++.+++++.|+++||+|||+++.++.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~---g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~ 95 (434)
T PRK11663 19 YWRRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDI---GLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGL 95 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHH---HHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHH
Confidence 455566666777778888888888999999999999998888 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 013992 107 FLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPG 186 (432)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~ 186 (432)
++.+++.+++++++|++.+++.|++.|++.|...+...+++.|++|+++|++++++.+.+..+|..+++.+.+++.+..+
T Consensus 96 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~g 175 (434)
T PRK11663 96 IATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYG 175 (434)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 99999999999999999999999999999998899999999999999999999999999999999999999999988777
Q ss_pred chHHHHHhhHHHHHHHHH-HHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchh-H
Q 013992 187 TWRWMLGVAGIPALLQFI-LMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKIN-L 264 (432)
Q Consensus 187 ~wr~~f~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 264 (432)
||+.|++.++..++..+ ..+++||+|++...+...++.++. .+. .++ +++++.+..+ .
T Consensus 176 -w~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-----------------~~~-~~~-~~~~~~~~~~~~ 235 (434)
T PRK11663 176 -WRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDA-----------------LEL-AQQ-QEGAGLSRKEIL 235 (434)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccc-----------------ccc-chh-ccccCCChhhhH
Confidence 99999998877665544 356678876532111100000000 000 000 0000001111 1
Q ss_pred -HHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 013992 265 -VKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRT 339 (432)
Q Consensus 265 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 339 (432)
...++++.++...+.. +........+..|.|.|+++..+.+..+++.......++.++++++.|+++||+
T Consensus 236 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~ 306 (434)
T PRK11663 236 TKYVLLNPYIWLLSFSY-----VLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKL 306 (434)
T ss_pred HHHHhcChHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHh
Confidence 1256667666533322 222224556777899999766666677888888888899999999999999998
No 18
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=8.2e-33 Score=267.42 Aligned_cols=374 Identities=17% Similarity=0.155 Sum_probs=266.8
Q ss_pred HHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHH
Q 013992 32 LAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFV 111 (432)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~ 111 (432)
.+..++++.++..++....++.+|.+.+++|.+..+. +++.+.+.++..++.++.|+++||+|||++++.+.++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 79 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQV---QWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTL 79 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhh---hHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHH
Confidence 4556677788889999999999999999999988888 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHH
Q 013992 112 GAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWM 191 (432)
Q Consensus 112 ~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~ 191 (432)
+.+++++++|++.+++.|+++|++.+...+...+++.|++|+++|+++++++.....+|..+++.+++++.+..+ ||+.
T Consensus 80 ~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-w~~~ 158 (485)
T TIGR00711 80 GSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYH-WRWI 158 (485)
T ss_pred HHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcC-ceeh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998877 9999
Q ss_pred HHhhHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHH------------HHhCCCC-chHHHHH-H----HHHHhHHH
Q 013992 192 LGVAGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAIL------------RKVYPAH-EVETEIR-D----LKESVDKE 252 (432)
Q Consensus 192 f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~------------~~~~~~~-~~~~~~~-~----~~~~~~~~ 252 (432)
|++.+.++++..++ .+++||+++. ++++.+...... .+..... ....... . ........
T Consensus 159 f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (485)
T TIGR00711 159 FLINVPIGIIVVVVAFFILPRDKPA--ASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFV 236 (485)
T ss_pred hhhhhHHHHHHHHHHHHHcCCcccc--ccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 99988777666555 5556665331 111222111110 0000000 0000000 0 00000001
Q ss_pred HHHccCccchhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHH
Q 013992 253 IEEEGSSEKINLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVS 332 (432)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (432)
.++.+++++....+.+++++++...+..+.... .++...++.|.|+++..+.++.+++....+..++.+++.++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~ 311 (485)
T TIGR00711 237 VWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGL-----GLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIA 311 (485)
T ss_pred HHHHcCCCCccCHHHHcCCChHHHHHHHHHHHH-----HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 112222233344578888888765544333332 456667788999998877778889999999999999999999
Q ss_pred HHHHhhhCCchhhHhHHHHHHHHHHHHHHHHhc-cCCCCCccchhcccccccccccccccccccCccchhhhhccCCCCc
Q 013992 333 IYFIDRTGRKKLLVISLSGVILSLGVLSAVFHE-TTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDC 411 (432)
Q Consensus 333 g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 411 (432)
|++.||++||+.+.++..+..++..++...... .+.+......++.+++............. ...|++.|++ +.
T Consensus 312 g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~---~~~~~~~~g~--~~ 386 (485)
T TIGR00711 312 GRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIAL---SGLPPHKIAR--GS 386 (485)
T ss_pred HHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCCHHHHhH--HH
Confidence 999999999999888887777766655522211 12122222222333332222212222222 2456699999 88
Q ss_pred cccccccccc
Q 013992 412 GFCASHSNKV 421 (432)
Q Consensus 412 g~~~~~~~~~ 421 (432)
|+.+...+..
T Consensus 387 ~~~~~~~~~g 396 (485)
T TIGR00711 387 SLSNFTRQLG 396 (485)
T ss_pred HHHHHHHHHH
Confidence 8877665544
No 19
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=2.9e-32 Score=255.64 Aligned_cols=279 Identities=19% Similarity=0.164 Sum_probs=216.0
Q ss_pred hhHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHH
Q 013992 27 PYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVAD 106 (432)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~ 106 (432)
+++|..+..+.++.+..........+.+|.+.+++|.++.+. +++.+.+.+++.+++++.|+++||+|||+++..+.
T Consensus 5 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~---g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 81 (390)
T PRK03545 5 KVAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQV---GLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLF 81 (390)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 334544555555545444444456667899999999999988 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 013992 107 FLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPG 186 (432)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~ 186 (432)
++.+++++++++++|++.++++|+++|++.+...+...+++.|++|+++|++++++...+..+|..++|++++.+.+..+
T Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~g 161 (390)
T PRK03545 82 VLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLG 161 (390)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhc
Confidence 99999999999999999999999999999998889999999999999999999999999999999999999999888777
Q ss_pred chHHHHHhhHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHH
Q 013992 187 TWRWMLGVAGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLV 265 (432)
Q Consensus 187 ~wr~~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (432)
||+.|++.++.+++..+. +..+||.|+ + + ++..++.+
T Consensus 162 -w~~~f~~~~~~~~l~~~~~~~~~~~~~~----~-~------------------------------------~~~~~~~~ 199 (390)
T PRK03545 162 -WRTTFLAIGGGALITLLLLIKLLPLLPS----E-H------------------------------------SGSLKSLP 199 (390)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhCCCCCC----C-C------------------------------------cchHHHHH
Confidence 999999998877766555 444566532 0 0 00011235
Q ss_pred HhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhh
Q 013992 266 KLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLL 345 (432)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 345 (432)
+.+|++.++......++... .......+.+.++++..+.+..+.+.......++.++++++.+++.||+++|+..
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~ 274 (390)
T PRK03545 200 LLFRRPALVSLYLLTVVVVT-----AHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL 274 (390)
T ss_pred HHHhCcHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH
Confidence 67888877654433222221 2333445667777776666677788888888889999999999999999987643
Q ss_pred HhHHHHHHHHH
Q 013992 346 VISLSGVILSL 356 (432)
Q Consensus 346 ~~~~~~~~~~~ 356 (432)
.+.....++.
T Consensus 275 -~~~~~~~~~~ 284 (390)
T PRK03545 275 -IAIALLLVCL 284 (390)
T ss_pred -HHHHHHHHHH
Confidence 4443333333
No 20
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1.9e-31 Score=229.27 Aligned_cols=388 Identities=20% Similarity=0.233 Sum_probs=284.6
Q ss_pred CChhHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHH
Q 013992 25 KNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILV 104 (432)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~ 104 (432)
..+++|........+.+.+.+-....+.+.|.+...+|.+..+. .++....+.|..+++..+|.++|++|||+.+..
T Consensus 72 fgrfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~---~llt~~v~~gmllga~~w~l~~d~~grr~~f~~ 148 (528)
T KOG0253|consen 72 FGRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQA---PLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNL 148 (528)
T ss_pred cccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhh---hHHHHHHHhhhhhhhhhhheehhhhhcchhhhh
Confidence 35677777777777777777666677778888888999887787 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCC
Q 013992 105 ADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRA 184 (432)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~ 184 (432)
.....++..++.+.++|+..+++.|.+.|+|.|+ .|...++-.|..|..+|...+-.. ..+.+|.++...+.......
T Consensus 149 T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~ 226 (528)
T KOG0253|consen 149 TFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSN 226 (528)
T ss_pred hHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999998 888889999999999998877666 88999999999999888888
Q ss_pred CCchHHHHHhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHH-----------HHHHHHHhHHHH
Q 013992 185 PGTWRWMLGVAGIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETE-----------IRDLKESVDKEI 253 (432)
Q Consensus 185 ~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~ 253 (432)
.+ |||.......+..+....++++||+||+...+++++++.+.+++++..|+.+.. +++.....++.+
T Consensus 227 ~g-wr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~ 305 (528)
T KOG0253|consen 227 FG-WRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSK 305 (528)
T ss_pred hh-HHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhh
Confidence 87 999999999888888888999999999999999999999999887765543211 010000001111
Q ss_pred HHccCccchhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcC-------------------CCchhHH
Q 013992 254 EEEGSSEKINLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSG-------------------FASNRTA 314 (432)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~ 314 (432)
.+..++......+ +-.|++++..+.....++...+. +++........++... -.+...-
T Consensus 306 ~~a~ke~rg~~~n-Llsp~lrkttlllw~iwfgnafs-yyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~d 383 (528)
T KOG0253|consen 306 SSAAKEVRGGTTN-LLSPKLRKTTLLLWRIWFGNAFS-YYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKD 383 (528)
T ss_pred hccccccccchHh-hcChHHHHHHHHHHHHHHhhHHH-HHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhH
Confidence 1111222223333 34566666666555555443333 3333333333333321 1122233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccccccccccc
Q 013992 315 LLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILSLGVLSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAAT 394 (432)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (432)
..-.++..+..++|.++.+++.||+|||+++..+++++.+..+++... ........+....-.+........|.++ +
T Consensus 384 YrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c--~~rn~~tvllf~arafisg~fqvaYvYt-P 460 (528)
T KOG0253|consen 384 YRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTC--KTRNAYTVLLFTARAFISGAFQVAYVYT-P 460 (528)
T ss_pred HHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHh--cCcchhHHHHHHHHHHHhchheEEEEec-C
Confidence 455566778899999999999999999999999888877766554443 3443333333333333333444455555 8
Q ss_pred cCccchhhhhccCCCCccccccccccccccccccCCC
Q 013992 395 ADRWDCMKCLKASSPDCGFCASHSNKVKGISAISPLI 431 (432)
Q Consensus 395 ~~~~~~~~~~r~~~~~~g~~~~~~~~~~g~~a~~~~~ 431 (432)
|++|+ .+|++ |-|.|++++... +.++|+|
T Consensus 461 EVyPT---avRat--gvGtcSsmaRIg---gI~~p~i 489 (528)
T KOG0253|consen 461 EVYPT---AVRAT--GVGTCSSMARIG---GIFSPVI 489 (528)
T ss_pred cccch---hhhhc--chhhhhhHHhhh---hhhhhHH
Confidence 88888 99999 999999998876 3455543
No 21
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=7.8e-32 Score=254.49 Aligned_cols=347 Identities=21% Similarity=0.235 Sum_probs=251.5
Q ss_pred CChhHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHH
Q 013992 25 KNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILV 104 (432)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~ 104 (432)
+.+++|..+...++..+.++++....+...|.+.+++|.++.+. +++.+.+.++..+++++.|+++||+|||+++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~---g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 85 (406)
T PRK11551 9 SSSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQM---GWAFSAGILGLLPGALLGGRLADRIGRKRILIV 85 (406)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHH
Confidence 44578888888889999999999999999999999999998888 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCC
Q 013992 105 ADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRA 184 (432)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~ 184 (432)
+.++..++.+++++++|++.+++.|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.++..+.+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 165 (406)
T PRK11551 86 SVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGD 165 (406)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888877
Q ss_pred CCchHHHHHhhHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchh
Q 013992 185 PGTWRWMLGVAGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKIN 263 (432)
Q Consensus 185 ~~~wr~~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (432)
.+ ||+.|++.++..++..+. ..++||+|++..++++.++. +..
T Consensus 166 ~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----------------------------------~~~ 209 (406)
T PRK11551 166 AA-WRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQR-----------------------------------APV 209 (406)
T ss_pred cC-HHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhh-----------------------------------hhh
Confidence 76 999999887765555544 55678887543221110000 000
Q ss_pred HHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCch
Q 013992 264 LVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKK 343 (432)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 343 (432)
..+.+++++.+.... .....+......+....+.|.++++.+ .+..+.+.......++.+++.++.|++.||+++|+
T Consensus 210 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~g-~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~ 286 (406)
T PRK11551 210 LRALFGEGRATATLL--LWISYFFTLIVLYFLLNWLPSLLVGQG-LSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRR 286 (406)
T ss_pred HHHHhhhhhhhHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCC-CChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 011111111111000 111112222244566677899988754 44667778888888999999999999999999999
Q ss_pred hhHhHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccccccccccccCccchhhhhccCCCCccccccccccc
Q 013992 344 LLVISLSGVILSLGVLSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCASHSNKV 421 (432)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~~~~~~ 421 (432)
.+..+.....+++..+... ...+...+..+..+.+.....+.......+. +|++.|++ +.|+.+...+..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~p~~~~g~--~~g~~~~~~~~g 356 (406)
T PRK11551 287 VVLLIYAGILASLAALAAA---PSFAGMLLAGFAAGLFVVGGQSVLYALAPLF---YPTQVRGT--GVGAAVAVGRLG 356 (406)
T ss_pred HHHHHHHHHHHHHHHHHhc---CcHHHHHHHHHHHHHHHHhHHHHHHHHHHHH---cchhhhhh--hhhHHHHhhhHH
Confidence 8887665555544433322 1222222222223322222222222222344 45589999 888887766543
No 22
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=1.6e-31 Score=253.74 Aligned_cols=349 Identities=15% Similarity=0.116 Sum_probs=230.5
Q ss_pred hhHHHHHHHHHHhhcccceeccccchhhhh-hhhcc--ccchhhhHHH-HHHHHHHHHHHHHHHHhhhhhhccccchHHH
Q 013992 27 PYVLRLAFSAGIGGLLFGYDTGVISGALLY-IRDDF--KSVDRKTLLQ-ESIVSMAVAGAIIGAAIGGWMNDRFGRRTSI 102 (432)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~--~~~~~~~~~~-~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l 102 (432)
.++++.+...+++.+.+++|...++...|. +.+++ +.++...... ....++..++..+++++.|+++||+|||+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 18 SRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAMGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 445567777888889999999998888775 45555 5555432111 1122455567889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCChh--------HHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHH
Q 013992 103 LVADFLFFVGAVIMAAAPNPG--------ALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLS 174 (432)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~ 174 (432)
+.+.++++++++++++++|+. .++++|+++|++.|..++....++.|++|+|+|++..+....+..+|..++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~ 177 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLS 177 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987 588999999999999999999999999999999999999999999999888
Q ss_pred HHHHhhccC--------CCCchHHHHHhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHH
Q 013992 175 YLINLAFTR--------APGTWRWMLGVAGIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLK 246 (432)
Q Consensus 175 ~~i~~~l~~--------~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (432)
..+...+.. ..+ ||+.|++.+++.++...+....||+|++..++++.+
T Consensus 178 ~~~~~~l~~~~~~~~~~~~g-Wr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~----------------------- 233 (438)
T PRK09952 178 TGLVSLISMMTTDEQFLSWG-WRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQA----------------------- 233 (438)
T ss_pred HHHHHHHHHhCCHHHhhccC-hHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhcc-----------------------
Confidence 777665542 344 999999988776665555556788876432211100
Q ss_pred HHhHHHHHHccCccchhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHH
Q 013992 247 ESVDKEIEEEGSSEKINLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNA 326 (432)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (432)
+. +++....+.++++++.+...+.. .+......+....|.|.|+++..+.+............+..+
T Consensus 234 --------~~-~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~ 300 (438)
T PRK09952 234 --------AA-KKRIPVIEALLRHPGAFLKIIAL----RLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSC 300 (438)
T ss_pred --------cc-cccCCHHHHHHHchHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 00 00001112345555554432211 122223455667788888876655555544444555566778
Q ss_pred HHHHHHHHHHhhhCCchhhHhHHHHHHHHHHHHHHHHhccCCCCCccch-hcccccccccccccccccccCccchhhhhc
Q 013992 327 AGSIVSIYFIDRTGRKKLLVISLSGVILSLGVLSAVFHETTSHSPMVSA-VETSHFSNLTCPDYSSAATADRWDCMKCLK 405 (432)
Q Consensus 327 ~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 405 (432)
++.++.|+++||++||+.+..+..+..++...+.............+.. +..+.......+.......|.+|. +.|
T Consensus 301 i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~---~~r 377 (438)
T PRK09952 301 LTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGA---SYR 377 (438)
T ss_pred HHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCc---chh
Confidence 8889999999999999988877665544433332222111111111111 111222222222233344565555 899
Q ss_pred cCCCCccccccc
Q 013992 406 ASSPDCGFCASH 417 (432)
Q Consensus 406 ~~~~~~g~~~~~ 417 (432)
++ +.|++...
T Consensus 378 ~t--g~g~~~~~ 387 (438)
T PRK09952 378 YS--GAGVGYQV 387 (438)
T ss_pred HH--HHhHHHHH
Confidence 99 88887644
No 23
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=5.4e-32 Score=249.65 Aligned_cols=320 Identities=12% Similarity=-0.006 Sum_probs=216.0
Q ss_pred ceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChh
Q 013992 44 GYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPG 123 (432)
Q Consensus 44 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~ 123 (432)
......+++.+|.+.+|+|.++.+. +++.+.+.+++.+++++.|+++||+|||++++.+......+.......+|++
T Consensus 4 ~~~~~~~~~~lp~i~~~~~~s~~~~---g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~ 80 (368)
T TIGR00903 4 QAIWVTFSPVLSLVAEDIDVSKEEL---GLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYE 80 (368)
T ss_pred hHHHHHHHhhHHHHHHHhCcCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHH
Confidence 3445567899999999999999888 9999999999999999999999999999987766555545443334447999
Q ss_pred HHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHH
Q 013992 124 ALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQF 203 (432)
Q Consensus 124 ~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~ 203 (432)
.+++.|+++|++.+. .+.....++|++|+|+|++++++.+.+..+|..+++++++++.+..+ ||+.|++.++++++..
T Consensus 81 ~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~g-Wr~~f~~~~~l~~~~~ 158 (368)
T TIGR00903 81 WLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGG-LQLLIIPIAAVAAAGI 158 (368)
T ss_pred HHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-hHHHHHHHHHHHHHHH
Confidence 999999999999985 45566677999999999999999999999999999999999988777 9999999887776655
Q ss_pred HH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHHHHHHHH
Q 013992 204 IL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRGLIAGVG 282 (432)
Q Consensus 204 ~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (432)
++ ++++||+|++.. +.. +. + + ...+.++++++|.+|...+..++
T Consensus 159 ~~~~~~lp~~p~~~~---~~~---------------~~--~----------~-----~~~~~~~ll~~~~~~~~~~~~~~ 203 (368)
T TIGR00903 159 ILVLAALPALPFQAA---EGF---------------GF--K----------D-----AVKEFGALAGRKDLWIIGAILGF 203 (368)
T ss_pred HHHHHHcCCCCCCCC---CCc---------------ch--H----------H-----HHHHHHHHHcChhHHHHHHHHHH
Confidence 54 667899875310 000 00 0 0 00134678899888765544333
Q ss_pred HHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCc---hhhHh-HHHHHHHHHHH
Q 013992 283 LQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRK---KLLVI-SLSGVILSLGV 358 (432)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~---~~~~~-~~~~~~~~~~~ 358 (432)
....++.+..|.|.|+++.+. +.. .+.......+.+. +..++++||..|| +.... ...+..+.+..
T Consensus 204 -----~~~~~~~~~~wlp~~L~~~g~-s~~-~~~~~~l~~~~g~---~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~ 273 (368)
T TIGR00903 204 -----GVALFDNLAIWLEAALRPAGL-EDI-AGDAVALAILAGL---IGVAVIPDRVARAGLRSIYIRAAALLIAAFFLA 273 (368)
T ss_pred -----HHHHHHHHHHHHHHHHHHCCC-ChH-HHHHHHHHHHHHH---HHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 333677888899999987654 343 4444444444444 4457888887643 32222 22222222222
Q ss_pred HHHHHhccCCCCCccchhcccccccccccccccccccCccchhhhhccCCCCccccccccccc
Q 013992 359 LSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCASHSNKV 421 (432)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~~~~~~ 421 (432)
+. ... ..........+.+++.....+......+|.+|+ +.|++ +.|+.....+..
T Consensus 274 ~~--~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~---~~rgt--~~G~~~~~g~~~ 328 (368)
T TIGR00903 274 LA--FEL-NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDK---ELHGK--AAGAIGFTSRAI 328 (368)
T ss_pred HH--Hcc-ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcch---hhcCc--ccchhhHHHHHH
Confidence 22 111 111111111222222222222233333555555 99999 999998877765
No 24
>PRK15075 citrate-proton symporter; Provisional
Probab=99.98 E-value=6.8e-31 Score=249.55 Aligned_cols=281 Identities=19% Similarity=0.225 Sum_probs=201.6
Q ss_pred HHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHH-----HHHHHHHHHHhhhhhhccccchHHHH
Q 013992 29 VLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSM-----AVAGAIIGAAIGGWMNDRFGRRTSIL 103 (432)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~-----~~~~~~i~~~~~g~l~dr~Grr~~l~ 103 (432)
|++....++++.+++++|+..++...|.+.+|++.++.+.. .+..+. ..++..+++++.|+++||+|||++++
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~ 90 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFA--SLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLI 90 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchH--HHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHH
Confidence 44567888889999999999999999999999998776641 222222 23333578899999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCChhH--------HHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHH
Q 013992 104 VADFLFFVGAVIMAAAPNPGA--------LITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSY 175 (432)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~--------~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~ 175 (432)
.+.+++++++++++++++++. ++++|+++|++.+...+....+++|++|+++|++++++......+|..+++
T Consensus 91 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~ 170 (434)
T PRK15075 91 VTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAA 170 (434)
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999874 689999999999999998999999999999999999999988888888777
Q ss_pred HHHhhcc--------CCCCchHHHHHhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHH
Q 013992 176 LINLAFT--------RAPGTWRWMLGVAGIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKE 247 (432)
Q Consensus 176 ~i~~~l~--------~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (432)
.+++.+. +..+ ||+.|++.++...+........||++++..+
T Consensus 171 ~~g~~l~~~~~~~~~~~~g-Wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~----------------------------- 220 (434)
T PRK15075 171 LLGYLLNQWLSPAQMAEWG-WRIPFLIGCLIVPFIFLIRRSLEETEEFLAR----------------------------- 220 (434)
T ss_pred HHHHHHHHhCCHHHHhccc-hHHHHHHHHHHHHHHHHHHHhcCCCHHHHHh-----------------------------
Confidence 7776652 3445 9999987654432222222223443211000
Q ss_pred HhHHHHHHccCccchhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHH
Q 013992 248 SVDKEIEEEGSSEKINLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAA 327 (432)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (432)
+++.+.+...++..++++.+. ..+. ..+.+...++....|.|.|+++..+.+..+.+....+..++.++
T Consensus 221 -------~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~ 289 (434)
T PRK15075 221 -------KHRPSMREIFRSLAANWRIVL---AGML-MVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFI 289 (434)
T ss_pred -------hhccccccHHHHHHHhHHHHH---HHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 000000111222233332221 1111 22223335667888899999886556667777888888888999
Q ss_pred HHHHHHHHHhhhCCchhhHhHHHHH
Q 013992 328 GSIVSIYFIDRTGRKKLLVISLSGV 352 (432)
Q Consensus 328 ~~~~~g~l~d~~~~~~~~~~~~~~~ 352 (432)
+.++.|+++||++||+.+..+....
T Consensus 290 ~~~~~g~l~Dr~g~r~~~~~~~~~~ 314 (434)
T PRK15075 290 WLPIGGALSDRIGRRPVLIAFTVLA 314 (434)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHH
Confidence 9999999999999999877654443
No 25
>TIGR00895 2A0115 benzoate transport.
Probab=99.98 E-value=1.8e-31 Score=251.47 Aligned_cols=374 Identities=22% Similarity=0.238 Sum_probs=252.1
Q ss_pred CChhHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHH
Q 013992 25 KNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILV 104 (432)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~ 104 (432)
.++++++.+...++..+..+++....++..|.+.+++|.+..+. +++.+.+.++..++.++.|+++||+|||+++..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~ 87 (398)
T TIGR00895 11 LSRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQL---GFLFSAGLIGMAFGALFFGPLADRIGRKRVLLW 87 (398)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHH---HHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHH
Confidence 34556666677777777888888888899999999999988888 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCC
Q 013992 105 ADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRA 184 (432)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~ 184 (432)
+.++.+++.++..++++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 167 (398)
T TIGR00895 88 SILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV 167 (398)
T ss_pred HHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCchHHHHHhhHHHHHHHH-HHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchh
Q 013992 185 PGTWRWMLGVAGIPALLQF-ILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKIN 263 (432)
Q Consensus 185 ~~~wr~~f~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (432)
.+ ||+.|++.++..++.. +.+.++||++++..++ +.++..+..++.......+.+. +.++++.+++....
T Consensus 168 ~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 238 (398)
T TIGR00895 168 FG-WRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSK-RPETVRRIVNAIAPQMQAEAQS-------ALPEQKATQGTKRS 238 (398)
T ss_pred cc-ceeehhhhhhHHHHHHHHHHHhCCCCChHHHhc-CHHHHHHHHHHHHHhccccccc-------cccccccccchhhH
Confidence 77 9999998875555444 4467788887655444 2232222222111100000000 00000000111112
Q ss_pred HHH-hhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCc
Q 013992 264 LVK-LLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRK 342 (432)
Q Consensus 264 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 342 (432)
..+ .++++..+..... . ...+.....+.....+.|.+.++.+ .+....+.......++.+++.++.+++.||+++|
T Consensus 239 ~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 315 (398)
T TIGR00895 239 VFKALFQGKTARITVLL-W-LLYFMLLVGVYFLTNWLPKLMVELG-FSLSLAATGGALFNFGGVIGSIIFGWLADRLGPR 315 (398)
T ss_pred HHHHHhcchhHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH
Confidence 222 3333322222221 1 1222333355666777886665554 4466777888888899999999999999999988
Q ss_pred hhhHhHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccccccccccccCccchhhhhccCCCCccccccccccc
Q 013992 343 KLLVISLSGVILSLGVLSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCASHSNKV 421 (432)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~~~~~~ 421 (432)
+.... ..+..+...++... ....+......+..+.+.....+.......+. .|++.|++ +.|+.....+..
T Consensus 316 ~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~g~--~~g~~~~~~~~g 386 (398)
T TIGR00895 316 VTALL-LLLGAVFAVLVGST--LFSPTLLLLLGAIAGFFVNGGQSGLYALMALF---YPTAIRAT--GVGWAIGIGRLG 386 (398)
T ss_pred HHHHH-HHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCHHHHHH--HHHHHHHHHHHH
Confidence 44333 33333333322221 11222222333334443333333333333444 45599999 888877665543
No 26
>PRK10504 putative transporter; Provisional
Probab=99.97 E-value=2.2e-30 Score=249.19 Aligned_cols=374 Identities=16% Similarity=0.179 Sum_probs=256.7
Q ss_pred HHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHH
Q 013992 33 AFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVG 112 (432)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 112 (432)
+..++++.++..++....++.+|.+.+++|.+..+. +++.+.+.++..++.++.|+++||+|||++++.+.++.+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~---~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 88 (471)
T PRK10504 12 LWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHM---HMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLG 88 (471)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 445666778888888889999999999999998888 88999999999999999999999999999999999999999
Q ss_pred HHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHH
Q 013992 113 AVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWML 192 (432)
Q Consensus 113 ~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f 192 (432)
.++++++++++.+++.|+++|++.+...+...+++.|++|+++|+++.++......+|..++|.+++.+.+..+ ||+.|
T Consensus 89 ~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~g-w~~~f 167 (471)
T PRK10504 89 SLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYAS-WHWIF 167 (471)
T ss_pred HHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcc-HHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998877 99999
Q ss_pred HhhHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHH---------hCCCCc---hHHHHHHH-----HHHhHHHHH
Q 013992 193 GVAGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRK---------VYPAHE---VETEIRDL-----KESVDKEIE 254 (432)
Q Consensus 193 ~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~---------~~~~~~---~~~~~~~~-----~~~~~~~~~ 254 (432)
++......+..+. ....|+.+. ++.+.+........ ...... ........ ........+
T Consensus 168 ~~~~~~~~l~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (471)
T PRK10504 168 LINIPVGIIGAIATLMLMPNYTM---QTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLH 244 (471)
T ss_pred HHHHHHHHHHHHHHHHhCCCccc---cCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 9988766666555 444455432 11122221111000 000000 00000000 000000011
Q ss_pred HccCccchhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 013992 255 EEGSSEKINLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIY 334 (432)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 334 (432)
+++..++....+++|+|.++......++... .......+.|.|++...+.++...++...+..++.+++.++.++
T Consensus 245 ~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 319 (471)
T PRK10504 245 ARNNNRALFSLKLFRTRTFSLGLAGSFAGRI-----GSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQ 319 (471)
T ss_pred HhcCCCCccCHHHhcccchHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1222223334468899988765444333222 44556667888888766677888888888888888888899999
Q ss_pred HHhhhCCchhhHhHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccccccccccccCccchhhhhccCCCCcccc
Q 013992 335 FIDRTGRKKLLVISLSGVILSLGVLSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFC 414 (432)
Q Consensus 335 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~ 414 (432)
+.||+++|+.+..+..+..+...++.........+......+..+.......+.......+ ..|++.++. +.|+.
T Consensus 320 l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~g~--~~~~~ 394 (471)
T PRK10504 320 VVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLK---DLPDNLASS--GNSLL 394 (471)
T ss_pred HHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cCCHHhccc--hHHHH
Confidence 9999999999988887777665555443221111111111222222222222222222222 445588888 87776
Q ss_pred ccccccccc
Q 013992 415 ASHSNKVKG 423 (432)
Q Consensus 415 ~~~~~~~~g 423 (432)
+...+...+
T Consensus 395 ~~~~~~g~~ 403 (471)
T PRK10504 395 SMIMQLSMS 403 (471)
T ss_pred HHHHHHHHH
Confidence 655544433
No 27
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.97 E-value=1.3e-30 Score=244.30 Aligned_cols=281 Identities=16% Similarity=0.138 Sum_probs=217.5
Q ss_pred hHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHH
Q 013992 28 YVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADF 107 (432)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~ 107 (432)
..|.....++++.+..... ...++.+|.+.+|+|.+..+. +++.+.+.+++.+++++.|+++||+|||+++..+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~-~~~~~~lp~i~~~~~~s~~~~---g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~ 82 (393)
T PRK09705 7 LNFMLLVLVLIGLNMRPLL-TSVGPLLPQLRQASGMSFSVA---ALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLL 82 (393)
T ss_pred hHHHHHHHHHHHHHcchhh-hccchhHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHH
Confidence 3454555555555544433 557899999999999999998 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCc
Q 013992 108 LFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGT 187 (432)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~ 187 (432)
+++++.+++++++|++.++++|+++|++.+...+....++.|++| ++|+++++.+..+..+|..+++.+++++.++..+
T Consensus 83 l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~ 161 (393)
T PRK09705 83 LIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSET 161 (393)
T ss_pred HHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999999997 7799999999999999999999999998887635
Q ss_pred hHHHHHhhHHHHHHHHHHHhhcCC-CHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHH
Q 013992 188 WRWMLGVAGIPALLQFILMLLLPE-SPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVK 266 (432)
Q Consensus 188 wr~~f~~~~~~~~~~~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (432)
||+.+.+.++..++..+.++...+ .|+ + +++ + +....+
T Consensus 162 w~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~------------------------------~~~-~--~~~~~~ 200 (393)
T PRK09705 162 WYQTLAWWALPAVVALFAWWWQSAREVA--------S------------------------------SHK-T--TTTPVR 200 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCc--------c------------------------------ccC-C--CcCCcc
Confidence 999887766655544433333222 110 0 000 0 011234
Q ss_pred hhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhH
Q 013992 267 LLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLV 346 (432)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~ 346 (432)
.+++++.+...+.. +.....+.....+.|.++++. +.+..+++.......++.++++++.+++.||.+||+...
T Consensus 201 ~l~~~~~~~l~~~~-----~~~~~~~~~~~~~lp~~l~~~-g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~ 274 (393)
T PRK09705 201 VVFTPRAWTLGVYF-----GLINGGYASLIAWLPAFYIEI-GASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLM 274 (393)
T ss_pred cccCHhHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHc-CCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHH
Confidence 45666655433322 222235667778899999885 555777888888899999999999999999999999888
Q ss_pred hHHHHHHHHHHHHH
Q 013992 347 ISLSGVILSLGVLS 360 (432)
Q Consensus 347 ~~~~~~~~~~~~~~ 360 (432)
.+..+..++..++.
T Consensus 275 ~~~~l~~~~~~~~~ 288 (393)
T PRK09705 275 LALVLQLVGFCGFI 288 (393)
T ss_pred HHHHHHHHHHHHHH
Confidence 88776666655443
No 28
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.97 E-value=5.5e-31 Score=247.92 Aligned_cols=279 Identities=19% Similarity=0.190 Sum_probs=219.0
Q ss_pred hcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHh
Q 013992 40 GLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAA 119 (432)
Q Consensus 40 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 119 (432)
++...++...++...|.+.+++|.++.+. +++.+++.++..++.++.|+++||+|||+++..+.++.+++.++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~---~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~ 79 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGLSAAQY---GYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA 79 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCCChhhH---HHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH
Confidence 34566777888999999999999998888 999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHH
Q 013992 120 PNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPA 199 (432)
Q Consensus 120 ~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~ 199 (432)
+|++.+++.|+++|++.+...+....++.|++|+++|++++++.+....+|..+++.+++.+.+..+ ||+.|++.++..
T Consensus 80 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~ 158 (399)
T TIGR00893 80 GAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFS-WQWAFIIEGVLG 158 (399)
T ss_pred cCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCC-chHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999888777 999999988877
Q ss_pred HHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHHHH
Q 013992 200 LLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRGLI 278 (432)
Q Consensus 200 ~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (432)
++..+. +++.||+|+.. +..++++.....+.. ..+.+.+++++.++...++.+++|+++...+
T Consensus 159 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (399)
T TIGR00893 159 IIWGVLWLKFIPDPPQKA-KWLTEEEKYIVVGGL---------------LAEQQGKGPSTPKKYQIKELLKDRRVWGLAL 222 (399)
T ss_pred HHHHHHhhheecCCCCcc-ccCCHHHHhhcchhh---------------ccccccccccCCCccchHHHhcCHHHHHHHH
Confidence 766655 44556654310 000111100000000 0000011122233445677888887766444
Q ss_pred HHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCch
Q 013992 279 AGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKK 343 (432)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 343 (432)
..+. ..........+.|.|+++..+.+..+.+.......++.+++.++.|++.||++||+
T Consensus 223 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 282 (399)
T TIGR00893 223 GQFL-----VNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRG 282 (399)
T ss_pred HHHH-----HHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3332 23356677788899988877777788888888889999999999999999999886
No 29
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.97 E-value=2.3e-29 Score=243.94 Aligned_cols=384 Identities=18% Similarity=0.158 Sum_probs=248.8
Q ss_pred hhHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHH
Q 013992 27 PYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVAD 106 (432)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~ 106 (432)
+++|+.+..++++.+++.++....++.+|.+.+++|.+..+. +++.+.+.++..+++++.|+++||+|||++++.+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 92 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQA---ASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISI 92 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 466778888888889999999999999999999999998888 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 013992 107 FLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPG 186 (432)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~ 186 (432)
++.+++.++.++++|++.+++.|++.|++.+...+....++.|++|+++|++++++...+..+|..+++.+.+.+.+..+
T Consensus 93 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 172 (496)
T PRK03893 93 VLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWG 172 (496)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988777
Q ss_pred chHHHHHhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHH-HHHH--HhHHHHHHccCccchh
Q 013992 187 TWRWMLGVAGIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIR-DLKE--SVDKEIEEEGSSEKIN 263 (432)
Q Consensus 187 ~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~ 263 (432)
||+.|++.++..++..+....+||++++..++++.++.++..+.....+....... .... ................
T Consensus 173 -w~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (496)
T PRK03893 173 -WRALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIV 251 (496)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHH
Confidence 99999886655555444455678876543322211111111111000000000000 0000 0000000000000000
Q ss_pred ----------H-HHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHH
Q 013992 264 ----------L-VKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVS 332 (432)
Q Consensus 264 ----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (432)
. ....+.+..+...........+..+...+....+.|.|+++..+.+..+.+.......++.+++.++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~ 331 (496)
T PRK03893 252 AVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVG 331 (496)
T ss_pred HHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00000000000111111111111111223456788999976656667888888899999999999999
Q ss_pred HHHHhhhCCchhhHhHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccccccccccccCccchhhhhccCCCCcc
Q 013992 333 IYFIDRTGRKKLLVISLSGVILSLGVLSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCG 412 (432)
Q Consensus 333 g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g 412 (432)
|++.||+++|+.+..+..+..+..+.+.... ....+......+..+............... +.+|++.|++ +.|
T Consensus 332 g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~--~~~ 405 (496)
T PRK03893 332 GFLGDWLGTRKAYVCSLLISQLLIIPVFAIG-GANVWVLGLLLFFQQMLGQGISGLLPKLIG---GYFDTEQRAA--GLG 405 (496)
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHHHHhhcc-ccHHHHHHHHHHHHHHHhcccchhhHHHHH---hhCCHHHhhc--ccc
Confidence 9999999999988877655554443322221 111111111111111111111112222222 3445699999 888
Q ss_pred cccccccc
Q 013992 413 FCASHSNK 420 (432)
Q Consensus 413 ~~~~~~~~ 420 (432)
+.....+.
T Consensus 406 ~~~~~~~~ 413 (496)
T PRK03893 406 FTYNVGAL 413 (496)
T ss_pred hhhhhhhH
Confidence 87766654
No 30
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.97 E-value=2.7e-30 Score=246.65 Aligned_cols=286 Identities=14% Similarity=0.070 Sum_probs=205.7
Q ss_pred hhHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHH
Q 013992 27 PYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVAD 106 (432)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~ 106 (432)
+++|..+..+++.....+.++..++...|++.++ |.+..+. +++.+.+.+++.+++++.|+++||+|||++++.+.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~---g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~ 100 (452)
T PRK11273 25 RLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDL---GFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGL 100 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHH---HHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHH
Confidence 4456666666666666777777778888999888 9988888 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh----CChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHH-HHHHHHhhc
Q 013992 107 FLFFVGAVIMAAA----PNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQF-LSYLINLAF 181 (432)
Q Consensus 107 ~~~~~~~~~~~~~----~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~-i~~~i~~~l 181 (432)
++.+++.+++++. .+++.+++.|++.|++.+...+.....+.|++|+++|++++++++.+..+|.. .+++++..+
T Consensus 101 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~ 180 (452)
T PRK11273 101 ILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGM 180 (452)
T ss_pred HHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 9999999988875 37888899999999999988888888899999999999999999999888864 555544333
Q ss_pred cCCCCchHHHHHhhHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCcc
Q 013992 182 TRAPGTWRWMLGVAGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSE 260 (432)
Q Consensus 182 ~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (432)
.... +||+.|++.+++.++..++ .+++||+|+....++ .++.++ + ..+. .+++++++.+.
T Consensus 181 ~~~~-gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~---~-------------~~~~-~~~~~~~~~~~ 241 (452)
T PRK11273 181 AWFN-DWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPP-IEEYKN---D-------------YPDD-YNEKHEQELTA 241 (452)
T ss_pred HHhc-cHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCC-hhhhhh---c-------------cccc-cccccCCCccH
Confidence 3333 4999999988777665444 677788865311111 110000 0 0000 00000000001
Q ss_pred chh-HHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 013992 261 KIN-LVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRT 339 (432)
Q Consensus 261 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 339 (432)
+.. ....+|++.+|...+...+... ..+....+.|.|+++..+.+..+++.......++.+++.++.|+++||+
T Consensus 242 ~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~ 316 (452)
T PRK11273 242 KQIFMQYVLPNKLLWYIAIANVFVYL-----LRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV 316 (452)
T ss_pred HHHHHHHHHcChHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 1236677777764444333222 4456777999999987666667777777888888999999999999999
Q ss_pred C
Q 013992 340 G 340 (432)
Q Consensus 340 ~ 340 (432)
+
T Consensus 317 ~ 317 (452)
T PRK11273 317 F 317 (452)
T ss_pred c
Confidence 4
No 31
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.97 E-value=2.5e-30 Score=248.28 Aligned_cols=290 Identities=20% Similarity=0.170 Sum_probs=227.7
Q ss_pred CCChhHHHHHHHHHHhhcccceeccccchhhhhhhh----------------------ccccchhhhHHHHHHHHHHHHH
Q 013992 24 WKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRD----------------------DFKSVDRKTLLQESIVSMAVAG 81 (432)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~----------------------~~~~~~~~~~~~~~~~s~~~~~ 81 (432)
...+.|+.+...++++..+.+.|+..++...+.+.+ |++.+..+. |++.+.+.++
T Consensus 12 ~~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~---g~~~s~~~~~ 88 (465)
T TIGR00894 12 YFCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQ---GLILSSHFYG 88 (465)
T ss_pred cccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHh---hHHHHHHHHH
Confidence 346677888888888888999999999998888876 677777777 9999999999
Q ss_pred HHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHH--hCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhH
Q 013992 82 AIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAA--APNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGAL 159 (432)
Q Consensus 82 ~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~ 159 (432)
+.+++++.|+++||+|||+++..+.++++++.+++.+ ..+++.+++.|+++|++.+...+....++.|++|+++|+++
T Consensus 89 ~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~ 168 (465)
T TIGR00894 89 QIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRL 168 (465)
T ss_pred HHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHH
Confidence 9999999999999999999999999999999888754 46788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCC-CchHHHHHhhHHHHHHHHHHHhh-cCCCHHHHHHcCCHHHHHHHHHHhCCCCc
Q 013992 160 VSTNGFLITSGQFLSYLINLAFTRAP-GTWRWMLGVAGIPALLQFILMLL-LPESPRWLYRKGREEEAQAILRKVYPAHE 237 (432)
Q Consensus 160 ~~~~~~~~~~g~~i~~~i~~~l~~~~-~~wr~~f~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (432)
+++...+..+|..+++++.+.+.+.. + ||+.|++.+++.++..++++. .+|+|+... +.+++|.+
T Consensus 169 ~~~~~~~~~~g~~i~~~l~~~l~~~~~g-w~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~----------- 235 (465)
T TIGR00894 169 LGMSTSGFQLGTFIFLPISGWLCESWGG-WPMIFYVFGIVGCAWSLLWFVFPADDPSIHP-CISKFEKK----------- 235 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCC-CCeehhhhhHHHHHHHHHHHHHhcCCcccCC-CCCHHHHH-----------
Confidence 99999999999999999999998874 6 999999999888777666444 556653110 11111100
Q ss_pred hHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHH
Q 013992 238 VETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLL 317 (432)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (432)
...+.. ++++++.+.+..+++.++++.+|...+.. ++.....+....|.|.|+++..+.+..+.+..
T Consensus 236 ------~i~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~ 302 (465)
T TIGR00894 236 ------YINSSL--QGQKGSTRQSLPIKAIPKSLPVWAIWFAI-----FGHFWLYTILPTYLPTFISWVLRVSGKENGLL 302 (465)
T ss_pred ------HHHhhc--ccccCCCCCCCCHHHHhcCHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhCcChHHhHHH
Confidence 000000 00011112234577888888877644433 33344667788899999988767778888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCc
Q 013992 318 SLVTSGLNAAGSIVSIYFIDRTGRK 342 (432)
Q Consensus 318 ~~~~~~~~~~~~~~~g~l~d~~~~~ 342 (432)
.....++.+++.++.|+++||+++|
T Consensus 303 ~~~~~~~~~i~~~~~g~l~d~~~~~ 327 (465)
T TIGR00894 303 SSLPYLFAWLCSIFAGYLADFLKSS 327 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 8888999999999999999997644
No 32
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.97 E-value=7.1e-31 Score=245.48 Aligned_cols=323 Identities=17% Similarity=0.091 Sum_probs=227.9
Q ss_pred ccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHH
Q 013992 47 TGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALI 126 (432)
Q Consensus 47 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~ 126 (432)
....++..|++.+++|.+..+. +++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+++++++|++.++
T Consensus 19 ~~~~~~~~~~~~~~~~~s~~~~---g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (377)
T TIGR00890 19 VYTWTLLAPPLGRYFGVGVTAV---AIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALY 95 (377)
T ss_pred HhhhhhHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 5567889999999999998888 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHH-
Q 013992 127 TGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFIL- 205 (432)
Q Consensus 127 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~- 205 (432)
+.|++.|++.+...+.....+.|++| |+|+++.++...+..+|..+++.+.+.+.+..+ ||+.|++.++..++..+.
T Consensus 96 ~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~f~~~~~~~~~~~~~~ 173 (377)
T TIGR00890 96 LTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEG-VPAAFIYMGIIFLLVIVLG 173 (377)
T ss_pred HHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhccc-HHHHHHHHHHHHHHHHHHH
Confidence 99999999999888888888999987 569999999999999998877666666666665 999999999887776665
Q ss_pred HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHHHHHHHHHHH
Q 013992 206 MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRGLIAGVGLQV 285 (432)
Q Consensus 206 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (432)
+++++|+|+.. .++ +++.++++.+.++.+++++++...+..+...
T Consensus 174 ~~~~~~~~~~~-~~~---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 218 (377)
T TIGR00890 174 AFLIGYPPGQL-IKT---------------------------------NIEVSVKDYTVWEMLRTPQFWVLYLSFFLNA- 218 (377)
T ss_pred HHheecCchhc-ccc---------------------------------CcccchhhhhHHHHHcCccHHHHHHHHHHHh-
Confidence 44455543200 000 0000011123456777877765443322211
Q ss_pred HhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHHHHHHHHHHhc
Q 013992 286 FQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILSLGVLSAVFHE 365 (432)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (432)
........+.+.|.++.+ .++.+.+.......+..++++++.|++.||++||+.+..+..+..++..++......
T Consensus 219 ----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (377)
T TIGR00890 219 ----VSGLLLIGLYKPYGQSLG-LSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPML 293 (377)
T ss_pred ----HHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccc
Confidence 122333445566666654 446667777888889999999999999999999999888877777766554433211
Q ss_pred cCCCCCccchhcccccccccccccccccccCccchhhhhccCCCCcccccccccc
Q 013992 366 TTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCASHSNK 420 (432)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~~~~~ 420 (432)
............+...............+ ..|++.|++ ..|+.+...+.
T Consensus 294 -~~~~~~~~~~~~g~~~g~~~~~~~~~~~~---~~~~~~~~~--~~g~~~~~~~~ 342 (377)
T TIGR00890 294 -NDVLFLATVALVFFTWGGTISLFPSLVSD---IFGPANSAA--NYGFLYTAKAV 342 (377)
T ss_pred -hhHHHHHHHHHHHHHhccchhccHHHHHH---Hhhhhhhhh--HhHHHHHHHHH
Confidence 11111111122222222222222222233 345588999 88887665544
No 33
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.97 E-value=1.1e-29 Score=238.19 Aligned_cols=278 Identities=18% Similarity=0.167 Sum_probs=223.7
Q ss_pred hcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHh
Q 013992 40 GLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAA 119 (432)
Q Consensus 40 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 119 (432)
.+..........+..|.+.+++|.++.+. +++.+.+.++..+++++.|+++||+|||+++..+.++..++.++.+++
T Consensus 14 ~~~~~~~~~~~~~~~p~~~~~~g~s~~~~---g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~ 90 (385)
T TIGR00710 14 SILGPLGIDMYLPAFPEIAADLSTPASIV---QMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALS 90 (385)
T ss_pred HHHHHHHHHHhcccHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 45556677888899999999999998888 999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHH
Q 013992 120 PNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPA 199 (432)
Q Consensus 120 ~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~ 199 (432)
++++.+.+.|++.|++.+...+...+++.|++|+++|+++.++.+....+|..+++.+++.+.+..+ ||+.|++.++..
T Consensus 91 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-~~~~~~~~~~~~ 169 (385)
T TIGR00710 91 NNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLS-WHAIFAFLSLAG 169 (385)
T ss_pred ccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-HHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999888776 999999988776
Q ss_pred HHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHHHH
Q 013992 200 LLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRGLI 278 (432)
Q Consensus 200 ~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (432)
++..+. +++.||+++. ++.+ +.++.....++.+++++++...+
T Consensus 170 ~~~~~~~~~~~~~~~~~----~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 213 (385)
T TIGR00710 170 ILLSALIFFILPETLPY----EARI--------------------------------QISTYFETFLLLLKSKMFWGYAL 213 (385)
T ss_pred HHHHHHHHHhCCCCCCC----cccC--------------------------------CHHHHHHHHHHHHcCchhHHHHH
Confidence 666555 4556665321 0000 00001123456778887766444
Q ss_pred HHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHHHHH
Q 013992 279 AGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILSLGV 358 (432)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 358 (432)
...... ........+.|.++++..+.++.+.+.......++.+++.++.+++.||+++|+.+..+..+..++..+
T Consensus 214 ~~~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 288 (385)
T TIGR00710 214 IYGASF-----GGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVL 288 (385)
T ss_pred HHHHHH-----HHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 322222 234555667788887666666788888888888999999999999999999999888877776666655
Q ss_pred HHHH
Q 013992 359 LSAV 362 (432)
Q Consensus 359 ~~~~ 362 (432)
+...
T Consensus 289 ~~~~ 292 (385)
T TIGR00710 289 LEIT 292 (385)
T ss_pred HHHH
Confidence 5443
No 34
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.97 E-value=6.4e-29 Score=230.57 Aligned_cols=294 Identities=13% Similarity=0.045 Sum_probs=222.4
Q ss_pred chheeeccCCCC---hhHHHHHHHHHHhhcccceeccccchhhhhhhh-ccccchhhhHHHHHHHHHHHHHHHHHHHhhh
Q 013992 15 AFRECFSLSWKN---PYVLRLAFSAGIGGLLFGYDTGVISGALLYIRD-DFKSVDRKTLLQESIVSMAVAGAIIGAAIGG 90 (432)
Q Consensus 15 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g 90 (432)
++++++++.|.+ +-.++.+....++.++........++..+.+.+ ++|+++.|. +++.+++.+++.++.++.|
T Consensus 15 ~w~pe~~~~w~~~~~~~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~---g~l~ai~~l~~al~rip~G 91 (462)
T PRK15034 15 DWKPENPAFWENKGKHIARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQL---FLLTALPSVSGALLRVPYS 91 (462)
T ss_pred CCCCCChHHHhhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHH---HHHHHHHHHHHHHHHHHHH
Confidence 344444433332 234567777777788888889999999999876 899999998 9999999999999999999
Q ss_pred hhhccccchHHHHHHHHHHHHHHHHHHHh-----CChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHH
Q 013992 91 WMNDRFGRRTSILVADFLFFVGAVIMAAA-----PNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGF 165 (432)
Q Consensus 91 ~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~ 165 (432)
++.||+|.|+++.++.+++.+.+++.+++ ++++.+++.|++.|++ +..++.....+++|+|+++||+++++...
T Consensus 92 ~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g 170 (462)
T PRK15034 92 FMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGG 170 (462)
T ss_pred HHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHH
Confidence 99999999999999999999999999987 8999999999999998 66888999999999999999999999976
Q ss_pred HHHHHHHHHHHHHhhcc-----C-------------CCCchHHHHHhhHHHHHHHHHHHhh-cCCCHHHHHHcCCHHHHH
Q 013992 166 LITSGQFLSYLINLAFT-----R-------------APGTWRWMLGVAGIPALLQFILMLL-LPESPRWLYRKGREEEAQ 226 (432)
Q Consensus 166 ~~~~g~~i~~~i~~~l~-----~-------------~~~~wr~~f~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~ 226 (432)
..++|..+++++...+. . .. +||..+++..++.++..++.++ .+|.|+
T Consensus 171 ~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~-~~~~~~~~~~~~~iv~~i~~~~~~~~~~~------------ 237 (462)
T PRK15034 171 LGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVM-SLANAAWIWVPLLAIATIAAWSGMNDIAS------------ 237 (462)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchH-HHHHHHHHHHHHHHHHHHHHHHhCCCccc------------
Confidence 66677766555554322 1 11 3888888888777766666444 433321
Q ss_pred HHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHc
Q 013992 227 AILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLS 306 (432)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (432)
++.+..+.++.+|+|+.|...+.. ++.+..+..+.++.|.|.++.
T Consensus 238 ------------------------------~~~~~~~~~~vlk~~~~Wllslly-----~~tFG~fvg~s~~lp~~~~~~ 282 (462)
T PRK15034 238 ------------------------------SRASIADQLPVLQRLHLWLLSLLY-----LATFGSFIGFSAGFAMLAKTQ 282 (462)
T ss_pred ------------------------------cccCHHHHHHHhCCCchhHHHHHH-----HHHHHHHHHHHHHHHHHHHHH
Confidence 111234556789999998755543 344446777788899998774
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHHHHHHHHH
Q 013992 307 GFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILSLGVLSAV 362 (432)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (432)
.. .........+..+...+.++++|+++||+|+++++.++.+...++...+...
T Consensus 283 ~~--~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~ 336 (462)
T PRK15034 283 FP--DVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLT 336 (462)
T ss_pred cC--hHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 42 2333333444567788999999999999999999998887776665443333
No 35
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.97 E-value=5.6e-30 Score=249.03 Aligned_cols=383 Identities=21% Similarity=0.223 Sum_probs=265.3
Q ss_pred eccCCCChhHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccch
Q 013992 20 FSLSWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRR 99 (432)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr 99 (432)
.+.++..++++......+.............++..+ ++.-+.+.+...+..+++++|..+|++++|+++||+|||
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-----~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk 148 (521)
T KOG0255|consen 74 NPLNWPSWKKWLLVIVICLDGWVYDYGSSVYSIVSE-----WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRK 148 (521)
T ss_pred CccccccccccccccccccceeEecCCCCcccccch-----hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccH
Confidence 344455555555444444433333333333333333 444455555559999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHh
Q 013992 100 TSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINL 179 (432)
Q Consensus 100 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~ 179 (432)
++++.++++..++.++.++++|++.+++.|++.|++.+........++.|++++++|+.+..+ ......+..+++..++
T Consensus 149 ~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a 227 (521)
T KOG0255|consen 149 PVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAA 227 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999 7777777777777777
Q ss_pred hccCCCCchHHHHHhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCch----HHHHHHHHHHhHHHHHH
Q 013992 180 AFTRAPGTWRWMLGVAGIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEV----ETEIRDLKESVDKEIEE 255 (432)
Q Consensus 180 ~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 255 (432)
++.. +||+.+++..+++++.++.+++.||+|||+..+++.+++.+.+++..+.+.. .+..+... .....+.
T Consensus 228 ~~~~---~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~--~~~~~~~ 302 (521)
T KOG0255|consen 228 YITR---DWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLEL--LLRPLKL 302 (521)
T ss_pred HHHh---hHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHH--HhhHhhh
Confidence 7776 4999999999999988888777789999999999999999998887654311 11111111 1111122
Q ss_pred ccCccchhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 013992 256 EGSSEKINLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYF 335 (432)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 335 (432)
...+++....++++.+++++.++.....++ .+....+-.+......+.+ ........+.....+....+..
T Consensus 303 ~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~-----~~~~~y~gl~~~~~~lg~~----~~~~~~~~~~~~~p~~~~~~~~ 373 (521)
T KOG0255|consen 303 LFTEPKISFLDLFRTPRLRYRTLYLLFIWF-----VFSLVYYGLSLNVSGLGGN----IYLNFTLSGLVELPAYFRNGLL 373 (521)
T ss_pred hccCCCCchhhhhcCHHHHHHHHHHHHHHH-----HHhHHHHhhhhhhhhcCch----HHHHHHHHHHHHhhHHHHHHHH
Confidence 222333568899999987776666555543 1122211222222222222 3444444555788888888999
Q ss_pred HhhhCCchhhHhHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccccccccccccCccchhhhhccCCCCccccc
Q 013992 336 IDRTGRKKLLVISLSGVILSLGVLSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCA 415 (432)
Q Consensus 336 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~ 415 (432)
.|+.|||.....+..+..++++...+.......+.......+..++.............|.+|+ ..|.. +.|.++
T Consensus 374 ~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt---~~r~~--~~~~~~ 448 (521)
T KOG0255|consen 374 LPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPT---VVRNT--AVGAIS 448 (521)
T ss_pred HHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccH---HHHHH--HHHHHH
Confidence 9999999999999999999888888776544421122222222222222222223333566666 99999 999888
Q ss_pred cccccccccccc
Q 013992 416 SHSNKVKGISAI 427 (432)
Q Consensus 416 ~~~~~~~g~~a~ 427 (432)
........++..
T Consensus 449 ~~~~~~~i~ap~ 460 (521)
T KOG0255|consen 449 AAARLGSILAPL 460 (521)
T ss_pred HHHHHHHHHHHH
Confidence 877766544433
No 36
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.97 E-value=9.9e-30 Score=236.87 Aligned_cols=293 Identities=17% Similarity=0.124 Sum_probs=212.5
Q ss_pred HHHHhhcccceeccccchhhhh-hhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHH
Q 013992 35 SAGIGGLLFGYDTGVISGALLY-IRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGA 113 (432)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 113 (432)
..+++.++...+.....+..|. +.+++|.+..+. +++.+.+.+++.+++++.|+++||+|||++++.+.++..++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~ 81 (366)
T TIGR00886 5 FSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQL---GNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPC 81 (366)
T ss_pred HHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHh---hHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 3455556667777888999995 999999999988 999999999999999999999999999999999999999999
Q ss_pred HHHHHhC-ChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCC--------
Q 013992 114 VIMAAAP-NPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRA-------- 184 (432)
Q Consensus 114 ~~~~~~~-~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~-------- 184 (432)
+++++++ +++.+++.|+++|++.+. .+....++.|++|+++|+++.++......+|..+++.+++.+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~ 160 (366)
T TIGR00886 82 LWAGLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLP 160 (366)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccc
Confidence 9999999 999999999999998664 566778999999999999999999877777777777766554431
Q ss_pred -CCchHHHH-HhhHHHHHHHHH-HHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccc
Q 013992 185 -PGTWRWML-GVAGIPALLQFI-LMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEK 261 (432)
Q Consensus 185 -~~~wr~~f-~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (432)
..+||+.| +..++...+..+ .+.+.+|+|+. +++++..+ ..+.. .+.+++..
T Consensus 161 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~------~~~~~---------------~~~~~~~~ 215 (366)
T TIGR00886 161 AHLAWGWAFVIVPAGILLLPALLIFFVGADTPPG----KPATGKLS------FKGAR---------------WSVGTGAL 215 (366)
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHhcccCCcc----cccchhcc------ccccc---------------ccccchhH
Confidence 11499999 443544443333 35556666531 11000000 00000 00000111
Q ss_pred hhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC
Q 013992 262 INLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGR 341 (432)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~ 341 (432)
...++.+++++++...+.... ..........+.|.|+++..+.++.+++.......+..++++++.|++.||+++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~ 290 (366)
T TIGR00886 216 GDQLKVFRDRHTWILALLYSV-----TFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGG 290 (366)
T ss_pred HHHHHHHhccchhhHHHHHHH-----HHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhcc
Confidence 144667888877654443222 222445667788889988766667888888888888899999999999999999
Q ss_pred chhhHhHHHHHHHHHHHHHH
Q 013992 342 KKLLVISLSGVILSLGVLSA 361 (432)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~ 361 (432)
|+.+..+......+..++..
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~ 310 (366)
T TIGR00886 291 ARKLLMSFLGVAMGAFLVVL 310 (366)
T ss_pred chhHHHHHHHHHHHHHHHHh
Confidence 88877776666665554444
No 37
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.97 E-value=8.6e-30 Score=240.35 Aligned_cols=293 Identities=17% Similarity=0.161 Sum_probs=231.1
Q ss_pred ChhHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHH
Q 013992 26 NPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVA 105 (432)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~ 105 (432)
++.++.....+.+..++..++...+.+.+|.+.+++|.+..+. ++..+.+.+++.+++++.|+++||+|||++++.+
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~---~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~ 84 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWV---PTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAG 84 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHH
Confidence 3566777777888888888888889999999999999998888 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 013992 106 DFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAP 185 (432)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~ 185 (432)
..+.+++.+++.++++++.+++.|+++|++.+...+....++.|++|+++|.+..++......+|..++|.+++.+.+..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~ 164 (406)
T PRK15402 85 VAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVL 164 (406)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999999999999999888888999999999999999999988888899999999999988877
Q ss_pred CchHHHHHhhHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhH
Q 013992 186 GTWRWMLGVAGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINL 264 (432)
Q Consensus 186 ~~wr~~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (432)
+ ||+.|++.++..++..+. ++..||+++.. +.++ +.++...+.
T Consensus 165 ~-w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-------------------------------~~~~~~~~~ 208 (406)
T PRK15402 165 P-WRGMFVLFAALAALSFFGLWRAMPETAGRV----GEKL-------------------------------SLKELGRDY 208 (406)
T ss_pred C-ccHHHHHHHHHHHHHHHHHHHhCCCCCccc----cccc-------------------------------cHHHHHHHH
Confidence 6 999999988877766554 45567764210 0000 000011234
Q ss_pred HHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchh
Q 013992 265 VKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKL 344 (432)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 344 (432)
++.+++|+++...+....... .......+.|.++++..+.++.+.+.......++.+++.++.+++.||+++|+.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~ 283 (406)
T PRK15402 209 KLVLKNRRFVAGALALGLVSL-----PLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSL 283 (406)
T ss_pred HHHHcCcHHHHHHHHHHHHHH-----HHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 567888887664443222221 233444556777766555666777777777777889999999999999999999
Q ss_pred hHhHHHHHHHHHHHHHHH
Q 013992 345 LVISLSGVILSLGVLSAV 362 (432)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~ 362 (432)
+.++.....++..++...
T Consensus 284 ~~~~~~~~~~g~~~~~~~ 301 (406)
T PRK15402 284 IRMGLWPMVAGLLLAALA 301 (406)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888877776666665554
No 38
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.97 E-value=3.1e-29 Score=240.09 Aligned_cols=275 Identities=18% Similarity=0.071 Sum_probs=201.5
Q ss_pred HHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHH
Q 013992 30 LRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLF 109 (432)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 109 (432)
++.+...+...+...++.....+.+|.+.+++|.+..+. +++.+.+.+++.+++++.|+++||+|||+++..+.+++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~---g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~ 111 (476)
T PLN00028 35 MRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDI---GNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLT 111 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 445555555566666666778888999999999998888 88899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhcc----CC-
Q 013992 110 FVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFT----RA- 184 (432)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~----~~- 184 (432)
+++.++++++++++.+++.|+++|++.+... ....+++|++|+++|++++++......+|..+++.+.+.+. +.
T Consensus 112 ~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~ 190 (476)
T PLN00028 112 APAVFCMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAG 190 (476)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999887654 45567899999999999999988777777776665554432 11
Q ss_pred ---CCchHHHHHhhHHHHHHHHHHHhhcCC-CHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCcc
Q 013992 185 ---PGTWRWMLGVAGIPALLQFILMLLLPE-SPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSE 260 (432)
Q Consensus 185 ---~~~wr~~f~~~~~~~~~~~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (432)
..+||+.|++.+++.++..+..+++++ .|+ ++.++.++ +.+.++.+.
T Consensus 191 ~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~-----~~~~~~~~------------------------~~~~~~~~~ 241 (476)
T PLN00028 191 APSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPD-----GNYRELKK------------------------SGTMPKDSF 241 (476)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCC-----CchhhHHh------------------------cCccccccH
Confidence 114999999999888777666555543 331 11000000 000000011
Q ss_pred chhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 013992 261 KINLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTG 340 (432)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~ 340 (432)
....++.++++++|...+..+ ...........+.|.|+.+..+.+..+++.......++.++++++.|+++||++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~ 316 (476)
T PLN00028 242 SKVLRYGVTNYRTWILALTYG-----YSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAA 316 (476)
T ss_pred HHHHHHHHcCchhHHHHHHHH-----HHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 123456677887765433221 122233455667888887766666788888888899999999999999999998
Q ss_pred Cc
Q 013992 341 RK 342 (432)
Q Consensus 341 ~~ 342 (432)
||
T Consensus 317 ~r 318 (476)
T PLN00028 317 RR 318 (476)
T ss_pred Hh
Confidence 65
No 39
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.97 E-value=5.7e-31 Score=246.32 Aligned_cols=277 Identities=17% Similarity=0.128 Sum_probs=211.4
Q ss_pred hhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHH
Q 013992 39 GGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAA 118 (432)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 118 (432)
+++..++++...+...|.+.+++|.+..+. +++.+++.++..+++++.|+++||+|||++++.+.++.+++.++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~---g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 79 (379)
T TIGR00881 3 GYAAYYLVRKNFALAMPYLVEEIGLSKTDL---GLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGF 79 (379)
T ss_pred hhhHHHHhHHhhhhhhHHHHHHhCCCHhHH---HHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHH
Confidence 345667788888999999999999998888 99999999999999999999999999999999999999999999999
Q ss_pred hCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHH-HHHhhccCCCCchHHHHHhhHH
Q 013992 119 APNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSY-LINLAFTRAPGTWRWMLGVAGI 197 (432)
Q Consensus 119 ~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~-~i~~~l~~~~~~wr~~f~~~~~ 197 (432)
+++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++ .++..+.+..+ ||+.|++.++
T Consensus 80 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 158 (379)
T TIGR00881 80 STSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYS-WHWVFIVPGI 158 (379)
T ss_pred hhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCC-chhHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999 56666666666 9999998887
Q ss_pred HHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHH
Q 013992 198 PALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRG 276 (432)
Q Consensus 198 ~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (432)
+.++..+. +++.||+|+....+..+++.. .+.+ ..+++++++.+..+...++.++++.++..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (379)
T TIGR00881 159 IAIIVSLICFLLLRDSPQSCGLPPAEEMPN---------EEPD--------GDAEKKEEELTKKQIFLQYVLLNKVLWYI 221 (379)
T ss_pred HHHHHHHHHheeeCCCccccccCccccCcc---------cccc--------cccccccccccchHHHHHHHHhcchHHHH
Confidence 76665444 556677653211000000000 0000 00000011111222345667788877664
Q ss_pred HHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC
Q 013992 277 LIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGR 341 (432)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~ 341 (432)
.+..+... ........+.|.|+++..+.++.+.+.......++.+++.++.+++.||..+
T Consensus 222 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~ 281 (379)
T TIGR00881 222 SLGYVFVY-----VVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFN 281 (379)
T ss_pred HHHHHHHH-----HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcC
Confidence 44333322 2456677788999887766667888888888899999999999999998643
No 40
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.97 E-value=2.9e-28 Score=228.15 Aligned_cols=271 Identities=17% Similarity=0.134 Sum_probs=208.0
Q ss_pred HHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHH
Q 013992 29 VLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFL 108 (432)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~ 108 (432)
.|+.+..+.++.+..........+.+|.+.+++|.++.+. ++..+.+.++..+++++.|+++||+|||++++.+.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~---g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~ 94 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVA---GQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVL 94 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHH
Confidence 4555555555545444455556667899999999999888 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCch
Q 013992 109 FFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTW 188 (432)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~w 188 (432)
.+++.+++++++|++.+++.|+++|++.+...+...+++.|++|+|+|+++.++...+.++|..++|.+++.+.+..+ |
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~g-w 173 (394)
T PRK10213 95 LTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIG-W 173 (394)
T ss_pred HHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-H
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998887 9
Q ss_pred HHHHHhhHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHh
Q 013992 189 RWMLGVAGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKL 267 (432)
Q Consensus 189 r~~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (432)
|+.|++.++++++..+. ....||+|+. + ++...+.++.
T Consensus 174 ~~~f~~~~~l~~~~~l~~~~~~p~~~~~-----~------------------------------------~~~~~~~~~~ 212 (394)
T PRK10213 174 RNVFNAAAVMGVLCIFWIIKSLPSLPGE-----P------------------------------------SHQKQNTFRL 212 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCcc-----c------------------------------------ccchhHHHHH
Confidence 99999988766655444 3345665310 0 0001123567
Q ss_pred hcccchhHHHHHHHHHHHHhhhcchHHHHHhH-HHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhH
Q 013992 268 LKTRTVRRGLIAGVGLQVFQQFVGINTVMYYS-PTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLV 346 (432)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~ 346 (432)
+++|.++...+..+... ........+. |.+.++. +.+....+.......++.+++.++.+++.||.+ |+.+.
T Consensus 213 l~~~~~~~~~~~~~~~~-----~~~~~~~~~~~p~~~~~~-g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~ 285 (394)
T PRK10213 213 LQRPGVMAGMIAIFMSF-----AGQFAFFTYIRPVYMNLA-GFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALA 285 (394)
T ss_pred hcCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHhc-CCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHH
Confidence 78888766444322221 1233333444 6666555 444667788788888899999999999999954 44444
Q ss_pred hHHHH
Q 013992 347 ISLSG 351 (432)
Q Consensus 347 ~~~~~ 351 (432)
.+..+
T Consensus 286 ~~~~~ 290 (394)
T PRK10213 286 GAPLV 290 (394)
T ss_pred HHHHH
Confidence 44333
No 41
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.97 E-value=4.3e-29 Score=233.35 Aligned_cols=278 Identities=14% Similarity=0.157 Sum_probs=219.5
Q ss_pred HHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHH
Q 013992 33 AFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVG 112 (432)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 112 (432)
+..+.+..+..+.......+.+|.+.+|+|.+..+. +++.+.+.+++.+++++.|+++||+|||+++..+..+.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~---g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 81 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAA---GHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIG 81 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHH---hHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHH
Confidence 344555667777777788889999999999998888 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHH
Q 013992 113 AVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWML 192 (432)
Q Consensus 113 ~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f 192 (432)
.+++++++|++.+++.|+++|++.+...+....++.|++|+++|++++++...+..+|..+++.+++++.+..+ ||+.|
T Consensus 82 ~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-wr~~f 160 (382)
T PRK10091 82 NAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFS-WRYTF 160 (382)
T ss_pred HHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhcc-HHHHH
Confidence 99999999999999999999999998888888899999999999999999999999999999999999988777 99999
Q ss_pred HhhHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhccc
Q 013992 193 GVAGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTR 271 (432)
Q Consensus 193 ~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (432)
++.++..++..+. ++++||.++ +.+. +..+..+.++++
T Consensus 161 ~~~~~~~~~~~~~~~~~lp~~~~----~~~~-------------------------------------~~~~~~~~~~~~ 199 (382)
T PRK10091 161 LLIAVFNIAVLASIYFWVPDIRD----EAKG-------------------------------------GLREQFHFLRSP 199 (382)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCc----cccc-------------------------------------CHHHHHHHhcCh
Confidence 9988876665554 556777531 0000 000112345555
Q ss_pred chhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHH
Q 013992 272 TVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSG 351 (432)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 351 (432)
+.+....... ...........+.+.++++..+.++.+.+.......++.++++++.+++.||+++|+.+..+..+
T Consensus 200 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~ 274 (382)
T PRK10091 200 APWLIFAATM-----FGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFI 274 (382)
T ss_pred HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHH
Confidence 5544222211 11112333344556676665566677888888888999999999999999999999998888777
Q ss_pred HHHHHHHHH
Q 013992 352 VILSLGVLS 360 (432)
Q Consensus 352 ~~~~~~~~~ 360 (432)
..++.+++.
T Consensus 275 ~~i~~~~~~ 283 (382)
T PRK10091 275 IVLALLMLF 283 (382)
T ss_pred HHHHHHHHH
Confidence 666655443
No 42
>PRK10133 L-fucose transporter; Provisional
Probab=99.97 E-value=2.9e-29 Score=237.34 Aligned_cols=297 Identities=12% Similarity=0.069 Sum_probs=219.8
Q ss_pred eccCCCChhHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccch
Q 013992 20 FSLSWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRR 99 (432)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr 99 (432)
+++...++.....+..+++..+..+++....++..|.+.+++|.++.+. +++.+.+.+++.+++++.|++.||+|||
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~---gl~~~~~~~g~~i~~~~~g~l~dr~G~r 91 (438)
T PRK10133 15 DKDAGQSRSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQA---GLIQSAFYFGYFIIPIPAGILMKKLSYK 91 (438)
T ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhCcH
Confidence 3333334445556666777778888889999999999999999998888 9999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH---HHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHH
Q 013992 100 TSILVADFLFFVGAVIM---AAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYL 176 (432)
Q Consensus 100 ~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~ 176 (432)
+++..+..++.++.+++ .++++++.++++|+++|++.+...+....++.|+.|+++|.+.++..+..+.+|..+++.
T Consensus 92 ~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~ 171 (438)
T PRK10133 92 AGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVV 171 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999875 568999999999999999999999999999999887777777899999999999999999
Q ss_pred HHhhccC-C-----------------C-------CchHHHHHhhH-HHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHH
Q 013992 177 INLAFTR-A-----------------P-------GTWRWMLGVAG-IPALLQFIL-MLLLPESPRWLYRKGREEEAQAIL 229 (432)
Q Consensus 177 i~~~l~~-~-----------------~-------~~wr~~f~~~~-~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~ 229 (432)
+++.+.. . . .+||+.|+... +..++..+. ...+||.++ + +.
T Consensus 172 ~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~----~-~~------- 239 (438)
T PRK10133 172 FGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQS----D-NH------- 239 (438)
T ss_pred HHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc----c-cc-------
Confidence 8875431 0 0 13666665433 333332222 223444211 0 00
Q ss_pred HHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHH-HHcCC
Q 013992 230 RKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIV-QLSGF 308 (432)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 308 (432)
.+++..+...+.++++++|+++...+..++ ..........|.+.|+ ++..+
T Consensus 240 -----------------------~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~l~~~~~g 291 (438)
T PRK10133 240 -----------------------SDAKQGSFSASLSRLARIRHWRWAVLAQFC-----YVGAQTACWSYLIRYAVEEIPG 291 (438)
T ss_pred -----------------------ccccccchhhhHHHHHhCchHHHHHHHHHH-----HHHHHHHHHHHHHHHHhhhcCC
Confidence 000001112234577888888764433222 2224444556777774 55667
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHHHHHH
Q 013992 309 ASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILSLGVL 359 (432)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 359 (432)
.++..++.......++.++++++++++.||+++|+.+..+..+..+.+.+.
T Consensus 292 ~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~ 342 (438)
T PRK10133 292 MTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLIS 342 (438)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 778899999999999999999999999999999999888766665554443
No 43
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.97 E-value=4.7e-31 Score=244.37 Aligned_cols=341 Identities=23% Similarity=0.284 Sum_probs=243.7
Q ss_pred HHhhcccceeccccchhhh-hhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHH
Q 013992 37 GIGGLLFGYDTGVISGALL-YIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVI 115 (432)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 115 (432)
+++.+...++.....+.+| .+.+++|.+..+. +++.+.+.++..+++++.|+++||+|||++++.+.++.+++.++
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~ 78 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQI---GLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLL 78 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCH---HHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHH
Confidence 3455666777777888999 8999999999998 99999999999999999999999999999999999999999777
Q ss_pred HHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhh
Q 013992 116 MAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVA 195 (432)
Q Consensus 116 ~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~ 195 (432)
..+++|.+.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..+++.+++.+.+..+ ||+.|++.
T Consensus 79 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~-~~~~~~~~ 157 (352)
T PF07690_consen 79 LAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFG-WRWAFLIS 157 (352)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCH-HCCHHHHH
T ss_pred hhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccc-cccccccc
Confidence 77778888999999999999999999999999999999999999999999999999999999999997776 99999999
Q ss_pred HHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccch-hHHHhhcccch
Q 013992 196 GIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKI-NLVKLLKTRTV 273 (432)
Q Consensus 196 ~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 273 (432)
++..++..++ ..+++++|+...++++.++. ++++++.. ..++..+++.+
T Consensus 158 ~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~ 208 (352)
T PF07690_consen 158 AILSLIAAILFILFLPEPPPPRERESPKESE-----------------------------SKKPKPLKPGFKSLFKNPVL 208 (352)
T ss_dssp HHHHHHHHHHHHCCC---STTTT--SSTTTT-------------------------------HHHCCCH-CTHHHHHHCC
T ss_pred cchhhhhhhhHhhhhhhcccccccccccccc-----------------------------cccccccccccccccccchh
Confidence 9888887765 45555543211000000000 00001111 24566666666
Q ss_pred hHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCc-hhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHH
Q 013992 274 RRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFAS-NRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGV 352 (432)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 352 (432)
|...+..+.. ...+.....+.|.|+++..+.+ ..+.+.......+..+++.++.+++.||+++|+.........
T Consensus 209 ~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 283 (352)
T PF07690_consen 209 WILLIAFFLF-----FFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLL 283 (352)
T ss_dssp HHHHHHHHHH-----HHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhhhhhhhHH-----HHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHH
Confidence 5222222222 2245567788888865555555 677887888888889999999999999999987777766666
Q ss_pred HHHHHHHHHHHhccCCCCCccchhcccccccccccccccccccCccchhhhhccCCCCcccccccccc
Q 013992 353 ILSLGVLSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCASHSNK 420 (432)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~~~~~ 420 (432)
.+....+.......+........++.+.+.....+.......+ ..|++.|++ ..|+.+...+.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~g~--~~g~~~~~~~~ 346 (352)
T PF07690_consen 284 ILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQE---LVPPEYRGT--AFGLFNSIGSL 346 (352)
T ss_dssp HHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHC---CCHTCHHHH--HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCCHHHHHH--HHHHHHHHHHH
Confidence 6655555444433222222223333444333333333333344 445588988 88877655443
No 44
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.97 E-value=6e-35 Score=279.48 Aligned_cols=375 Identities=33% Similarity=0.533 Sum_probs=267.9
Q ss_pred Hhhcccceeccccchhhhhhh--hccccchh------hhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHH
Q 013992 38 IGGLLFGYDTGVISGALLYIR--DDFKSVDR------KTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLF 109 (432)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~------~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 109 (432)
++.+..++|....+...+... .++..+.. +..+.++..+...+|..+|+++.|.++||+|||++++.+.++.
T Consensus 7 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~ 86 (451)
T PF00083_consen 7 LGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLM 86 (451)
T ss_pred HHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccccc
Confidence 344667777776666555544 22222111 2234588999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhC---ChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCC-
Q 013992 110 FVGAVIMAAAP---NPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAP- 185 (432)
Q Consensus 110 ~~~~~~~~~~~---~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~- 185 (432)
.++.++.++++ |++.+.++|+++|++.|...+....++.|..|+++|++..++.+....+|..++..++..+.+..
T Consensus 87 ~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~ 166 (451)
T PF00083_consen 87 IIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSD 166 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999 99999999999999999999999999999999999999999999999999999888876653322
Q ss_pred -CchHHHHHhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhH
Q 013992 186 -GTWRWMLGVAGIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINL 264 (432)
Q Consensus 186 -~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (432)
..||+.+.+.++++++..+..+++||||+|+.++++.||+++.+++.++.+..+++.++..+.. ++.++++...
T Consensus 167 ~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 241 (451)
T PF00083_consen 167 NWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEK-----KESQESKASW 241 (451)
T ss_pred cccccccccccccccccccccccccccccceeccccccccccccccccccccccccccccccccc-----ccccccceee
Confidence 1499999999999988888888899999999999999999988887554432222221111111 1111111456
Q ss_pred HHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchh
Q 013992 265 VKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKL 344 (432)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 344 (432)
++++++++.++..+..+.+..+.+..+.....++.+.+++..+..++ ........+...++.+++.++.||+|||+.
T Consensus 242 ~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~ 318 (451)
T PF00083_consen 242 RDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS---FLATLILGLVNFLGTLLAIFLIDRFGRRKL 318 (451)
T ss_pred eeccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccc
Confidence 77777766555556656666666666667777777877777665544 233344556677888888899999999999
Q ss_pred hHhHHHHHHHHHHHHH--HHHhccC----CC-CCccchhcccccccccccccccccccCccchhhhhccCCCCccccccc
Q 013992 345 LVISLSGVILSLGVLS--AVFHETT----SH-SPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCASH 417 (432)
Q Consensus 345 ~~~~~~~~~~~~~~~~--~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~~ 417 (432)
++.+.....++...+. ....... .. ......+....+.....+.......|.+|+ +.|++ +.|++...
T Consensus 319 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt---~~R~~--~~~~~~~~ 393 (451)
T PF00083_consen 319 LIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPT---KVRST--GIGLSYAV 393 (451)
T ss_pred cccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccc---ccccc--cccccccc
Confidence 9998888877776664 1111111 11 111111111122222222332344677766 99999 99999998
Q ss_pred cccccccc
Q 013992 418 SNKVKGIS 425 (432)
Q Consensus 418 ~~~~~g~~ 425 (432)
......+.
T Consensus 394 ~~i~~~i~ 401 (451)
T PF00083_consen 394 GRIGGFII 401 (451)
T ss_pred cccccccc
Confidence 87655444
No 45
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.97 E-value=8.6e-32 Score=239.60 Aligned_cols=281 Identities=19% Similarity=0.253 Sum_probs=224.4
Q ss_pred CCChhHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHH
Q 013992 24 WKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSIL 103 (432)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~ 103 (432)
...+..++.+.++++..+++..|+..+..+++.+.+.||+++... |++.+.+.+.+++.+|+.|+++|||+||+++.
T Consensus 26 ~~~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~---Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~ 102 (493)
T KOG1330|consen 26 LSMKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSEL---GLLQTVFIVVFMIASPLFGYLADRYNRKRVIA 102 (493)
T ss_pred cccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhc---cchhHHHHHHHHHHHHHHHHHHhhcCcceEEe
Confidence 345566778889999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccC
Q 013992 104 VADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTR 183 (432)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~ 183 (432)
.|..++.++.++++++..+|+++++|.+.|+|.+.+.|.++++++|.+|.++|++++++++.+..+|..+|.+++..+.+
T Consensus 103 vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~ 182 (493)
T KOG1330|consen 103 VGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVAS 182 (493)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccch
Q 013992 184 APGTWRWMLGVAGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKI 262 (432)
Q Consensus 184 ~~~~wr~~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (432)
..+.|||.|+..++++++..++ .++.+|++| +..++.+. +.+..+...+..+
T Consensus 183 ~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~r-----ga~~~~~~----------------------~~~~~~~~ts~~k 235 (493)
T KOG1330|consen 183 LTFWWRWAFRGSAVLGVIVGLLVFLFVREPER-----GARDEVDG----------------------ENKMVKPFTSVWK 235 (493)
T ss_pred CccceEEEEEeehHHHHHHHHHHHhhccCccc-----cccccccc----------------------CCcCCCCccchHH
Confidence 8777999999999999988877 555666643 11111000 0000011222344
Q ss_pred hHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHc---CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 013992 263 NLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLS---GFASNRTALLLSLVTSGLNAAGSIVSIYFIDRT 339 (432)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 339 (432)
+.+.+.|++.+....+......+ ..+.+.+|.|.+.... .+.+......+..+...++.+|.+++|.++||+
T Consensus 236 Dl~~l~~~~v~v~~sl~~~a~~f-----v~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~ 310 (493)
T KOG1330|consen 236 DLKVLAKIKVFVLSSLGIIAAQF-----VIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKL 310 (493)
T ss_pred HHHHHHccCceeeehHHHHHHHH-----hccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHH
Confidence 55566666666554444333333 3444555555554332 223344566777778889999999999999995
No 46
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.97 E-value=4.3e-30 Score=239.16 Aligned_cols=338 Identities=10% Similarity=-0.016 Sum_probs=241.3
Q ss_pred HhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHH
Q 013992 38 IGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMA 117 (432)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 117 (432)
++.++..+......+.+|.+..+++.+..+. +++.+++.++..+++++.|+++||+|||++++.+.++..++.++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~---g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~ 82 (365)
T TIGR00900 6 AAQLISLIGTAITQVALPLYVLAGTGSASVL---SLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLP 82 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccHHHH---HHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHH
Confidence 4455666667778888899999998888777 9999999999999999999999999999999999999999888888
Q ss_pred HhC-----ChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHH
Q 013992 118 AAP-----NPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWML 192 (432)
Q Consensus 118 ~~~-----~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f 192 (432)
+.+ |++.+++.|+++|++.+...+...+++.|++|+++|++++++.+....+|..+++.+++.+.+..+ ||+.|
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-~~~~~ 161 (365)
T TIGR00900 83 FVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLG-IKWAI 161 (365)
T ss_pred HHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHH
Confidence 877 999999999999999999999999999999999999999999999999999999999999988776 99999
Q ss_pred HhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccc
Q 013992 193 GVAGIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRT 272 (432)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (432)
++.++..++..+..+.++++++ ++.+.++.+ ++ ..+ +.....++.+|+|.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~------------~~-----------~~~----~~~~~~~~~~~~~~ 211 (365)
T TIGR00900 162 WVDAVGFAISALLIVSVRIPEL---AASEIQALS------------NA-----------VLR----DTREGIKFVLKNPL 211 (365)
T ss_pred HHHHHHHHHHHHHHHhcccccC---CCccccccc------------hh-----------HHH----HHHhHHHHHHcCcH
Confidence 9888766665555444322210 000000000 00 000 01123456677887
Q ss_pred hhHHHHHHHHHHHHhhhcchHHHH-HhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHH
Q 013992 273 VRRGLIAGVGLQVFQQFVGINTVM-YYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSG 351 (432)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 351 (432)
++...+..+.... ...... .+.|.+.++..+.++.+.+.......++.+++.++.+++.||.+||+.+..+..+
T Consensus 212 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 286 (365)
T TIGR00900 212 LRTLLLLALLFNL-----VFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFV 286 (365)
T ss_pred HHHHHHHHHHHHH-----HHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHH
Confidence 7654444332222 233333 6778888875566677888888888999999999999999999999988877666
Q ss_pred HHHHHHHHHHHHhccCCCCCccchhcccccccccccccccccccCccchhhhhccCCCCccccccccccc
Q 013992 352 VILSLGVLSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCASHSNKV 421 (432)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~~~~~~ 421 (432)
..++...+..... +.+...+..+..+++.....+..... ....+|++.|++ ..|+.....+..
T Consensus 287 ~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~g~--~~~~~~~~~~~~ 349 (365)
T TIGR00900 287 IGLAILVVGLTPP--NFPLFLVLWFAIGVGYGPINVPQGTL---LQRRVPAELLGR--VFGAQFSLSHAA 349 (365)
T ss_pred HHHHHHHHHhhch--hHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhCCHHHHHH--HHHHHHHHHHHH
Confidence 6665554444321 12222222333333332222222222 233455689999 888877665544
No 47
>PRK03699 putative transporter; Provisional
Probab=99.97 E-value=3.5e-28 Score=228.18 Aligned_cols=283 Identities=13% Similarity=0.123 Sum_probs=217.2
Q ss_pred hHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHH
Q 013992 28 YVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADF 107 (432)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~ 107 (432)
.|++.....++..+..+.+....++.+|.+.+++|.+..+. +++.+.+.+++.+++++.|++.||+|||++++.+.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~---g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~ 80 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSM---SNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFA 80 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 44556666677778888888889999999999999998888 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCc
Q 013992 108 LFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGT 187 (432)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~ 187 (432)
+..++.++++++++++.+++.|+++|++.+...+....++.|++|+++|+++++..+....+|..++|.+.+.+.+...+
T Consensus 81 ~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~g 160 (394)
T PRK03699 81 LMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIE 160 (394)
T ss_pred HHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999999999999999999988888899999999999999999998888889999999888877653324
Q ss_pred hHHHHHhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHh
Q 013992 188 WRWMLGVAGIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKL 267 (432)
Q Consensus 188 wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (432)
||+.|.+.+++.++..++.++ .+.|+. + +.++ +++++. .++
T Consensus 161 w~~~f~~~~~~~~~~~~~~~~-~~~p~~---~-~~~~-----------------------------~~~~~~----~~~- 201 (394)
T PRK03699 161 WYWVYACIGLVYVAIFILTLF-SEFPAL---G-KHAP-----------------------------KADKPV----AKE- 201 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-cCCccc---c-ccCc-----------------------------cccCcc----ccc-
Confidence 999999888776665554333 222210 0 0000 000000 000
Q ss_pred hcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHh
Q 013992 268 LKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVI 347 (432)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~ 347 (432)
..++.++. .....++.....+....|.|.|+++..+.+..+.+.......++..+++++.++++||+++|+.+..
T Consensus 202 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~ 276 (394)
T PRK03699 202 KWGIGVLF-----LAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTV 276 (394)
T ss_pred cCChHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHH
Confidence 01222222 2222233333456777899999987766777788888888888999999999999999999998877
Q ss_pred HHHHHHHHHH
Q 013992 348 SLSGVILSLG 357 (432)
Q Consensus 348 ~~~~~~~~~~ 357 (432)
...+..+.+.
T Consensus 277 ~~~~~~~~~~ 286 (394)
T PRK03699 277 LAGLALVLMY 286 (394)
T ss_pred HHHHHHHHHH
Confidence 6655554433
No 48
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.97 E-value=2.4e-28 Score=229.97 Aligned_cols=269 Identities=14% Similarity=0.193 Sum_probs=213.9
Q ss_pred HHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHH
Q 013992 33 AFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVG 112 (432)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 112 (432)
...+.+..+...++.....+.+|.+.++++.+..+. ++..+++.+++.+++++.|+++||+|||++++.+.++++++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~---~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 94 (413)
T PRK15403 18 PMALILYDFAAYLTTDLIQPGIINVVRDFNADVSLA---PASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLA 94 (413)
T ss_pred HHHHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHH
Confidence 334455666777888899999999999999988888 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHH
Q 013992 113 AVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWML 192 (432)
Q Consensus 113 ~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f 192 (432)
.+++++++|++.++++|+++|++.+...+....++.|++|+++|++++++......+|..++|.+++.+.+..+ ||+.|
T Consensus 95 ~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~g-w~~~f 173 (413)
T PRK15403 95 CAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVH-WKVLF 173 (413)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-HHHHH
Confidence 99999999999999999999999887777777889999999999999999999999999999999999887776 99999
Q ss_pred HhhHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhccc
Q 013992 193 GVAGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTR 271 (432)
Q Consensus 193 ~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (432)
++.++..++..+. ++.+||+++. +++.. +.+....+.++.+|||
T Consensus 174 ~~~~~~~~i~~~~~~~~lp~~~~~---~~~~~--------------------------------~~~~~~~~~~~ll~~~ 218 (413)
T PRK15403 174 AIIAVMGLIAFVGLLLAMPETVKR---GAVPF--------------------------------SAKSVLRDFRNVFRNR 218 (413)
T ss_pred HHHHHHHHHHHHHHHHhCCCCccc---cCCCC--------------------------------ChHHHHHHHHHHHcCH
Confidence 9998877776655 5567887420 00000 0000122456788998
Q ss_pred chhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhh
Q 013992 272 TVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLL 345 (432)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 345 (432)
.++...+..... .........+.|.++++..+.++.+.++...+...+.+++..+.+.+.++..+++..
T Consensus 219 ~~~~~~l~~~~~-----~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~ 287 (413)
T PRK15403 219 LFLTGAATLSLS-----YIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFI 287 (413)
T ss_pred HHHHHHHHHHHH-----HHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHH
Confidence 887755443222 224456666789999988777788888888877788888888888776554444443
No 49
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.96 E-value=5.9e-29 Score=236.54 Aligned_cols=289 Identities=14% Similarity=0.071 Sum_probs=209.7
Q ss_pred HHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHH
Q 013992 29 VLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFL 108 (432)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~ 108 (432)
++..+....+.....+.++.......|.+.+ +|.++.+. +++.+++.++..+++++.|+++||+|||++++.+.++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~---g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~ 100 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGEL---GFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLIL 100 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHh---HHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHH
Confidence 4555666666677777777777777888776 58888888 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh----CChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCC
Q 013992 109 FFVGAVIMAAA----PNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRA 184 (432)
Q Consensus 109 ~~~~~~~~~~~----~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~ 184 (432)
.+++.++.++. ++++.+.+.|++.|++.+...+.....+.|++|+++|++++++.+.+..+|..+++.+.+...+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~ 180 (438)
T TIGR00712 101 SAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAW 180 (438)
T ss_pred HHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHH
Confidence 99998887764 46778889999999999998888889999999999999999999999999999988777654443
Q ss_pred CCchHHHHHhhHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchh
Q 013992 185 PGTWRWMLGVAGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKIN 263 (432)
Q Consensus 185 ~~~wr~~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (432)
..+||+.|++.++.+++..+. ++++||+|+....+ +.++.++ +.. +. ..++.+++.+.++..
T Consensus 181 ~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~-------~~~-~~--------~~~~~~~~~~~~~~~ 243 (438)
T TIGR00712 181 FNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLP-PIEEYRN-------DYP-DD--------YNEKAEQELTAKEIF 243 (438)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCC-Cchhccc-------ccc-cc--------cccccccccchHHHH
Confidence 224999999988877775544 66678876531100 0000000 000 00 000000000001111
Q ss_pred HHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCch
Q 013992 264 LVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKK 343 (432)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 343 (432)
.+..+|++.++...+...+. +...+....+.|.|+++..+.++..++....+..+..+++.++.|++.||+++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~ 318 (438)
T TIGR00712 244 MQYVLPNKLLWYIAIANVFV-----YLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGN 318 (438)
T ss_pred HHHHccCchHHHHHHHHHHH-----HHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 23467888777654433222 2245667788999999876666777888888888899999999999999996543
No 50
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.96 E-value=5.4e-28 Score=227.42 Aligned_cols=328 Identities=19% Similarity=0.195 Sum_probs=220.6
Q ss_pred cccceeccccchhhhhhhhcccc--chhhhHHHHHHH-----HHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHH
Q 013992 41 LLFGYDTGVISGALLYIRDDFKS--VDRKTLLQESIV-----SMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGA 113 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~-----s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 113 (432)
+.+++|+..++...+.+.+++.. ++++. +.+. +...++..+++++.|+++||+|||++++.+.++..++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~ 79 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPLV---ALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGT 79 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChHH---HHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 55677888888888888887653 23222 3322 23334445789999999999999999999999999999
Q ss_pred HHHHHhCChh--------HHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccC--
Q 013992 114 VIMAAAPNPG--------ALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTR-- 183 (432)
Q Consensus 114 ~~~~~~~~~~--------~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~-- 183 (432)
++++++++++ .+++.|+++|++.+...+....++.|++|+++|++..+....+..+|..+++.++..+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~ 159 (394)
T TIGR00883 80 LLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLL 159 (394)
T ss_pred HHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999876 478899999999999999999999999999999999999999999999999988765532
Q ss_pred ------CCCchHHHHHhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHcc
Q 013992 184 ------APGTWRWMLGVAGIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEG 257 (432)
Q Consensus 184 ------~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (432)
..+ ||+.|++.++..++........||+|++..+ ++++
T Consensus 160 ~~~~~~~~~-w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~ 203 (394)
T TIGR00883 160 GDDALLEWG-WRIPFLVSAVLVLIGLYLRRNLEETPVFEKA-----------------------------------QEKH 203 (394)
T ss_pred CHHHhhccc-hHHHHHHHHHHHHHHHHHHHhcCCChhHHHH-----------------------------------Hhcc
Confidence 334 9999998887766666555666776532110 0011
Q ss_pred CccchhHHHhhcccc--hhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 013992 258 SSEKINLVKLLKTRT--VRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYF 335 (432)
Q Consensus 258 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 335 (432)
++.+.+.++.+++++ ++.... ..+...........+.|.|.++..+.+..+.+.......+..+++.++.|++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l 278 (394)
T TIGR00883 204 KKKRGPIRETLTKHRKPFLLGLG-----LVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGAL 278 (394)
T ss_pred ccccCCHHHHHHhchHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112233455566554 322121 2222233456667788999876666667777888888888999999999999
Q ss_pred HhhhCCchhhHhHHHHHHHHH-HHHHHHHhccCCCCCccchhcccccccccccccccccccCccchhhhhccCCCCcccc
Q 013992 336 IDRTGRKKLLVISLSGVILSL-GVLSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFC 414 (432)
Q Consensus 336 ~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~ 414 (432)
.||++||+.+.....+..+.. ..+.......+.+......+..+.+.....+.......|..| ++.|++ +.|+.
T Consensus 279 ~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p---~~~~~~--~~~~~ 353 (394)
T TIGR00883 279 SDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFP---TEVRYT--GASLA 353 (394)
T ss_pred HHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCC---ccceee--Eeeeh
Confidence 999999987775544443332 222222212222222222222333222222233333344444 488999 88876
Q ss_pred ccc
Q 013992 415 ASH 417 (432)
Q Consensus 415 ~~~ 417 (432)
.+.
T Consensus 354 ~~~ 356 (394)
T TIGR00883 354 YNL 356 (394)
T ss_pred hHh
Confidence 443
No 51
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.96 E-value=5.4e-28 Score=213.89 Aligned_cols=291 Identities=17% Similarity=0.186 Sum_probs=241.0
Q ss_pred hhHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHH
Q 013992 27 PYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVAD 106 (432)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~ 106 (432)
+.+++.+....+...+....+...+++.+.+.+++|++++|. +++.++..+...+..++.|.+.||||.|++...+.
T Consensus 10 ~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~---~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~ 86 (417)
T COG2223 10 RIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQK---GLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSM 86 (417)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHH---HHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHH
Confidence 334555666666667777888899999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCChh---HHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccC
Q 013992 107 FLFFVGAVIMAAAPNPG---ALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTR 183 (432)
Q Consensus 107 ~~~~~~~~~~~~~~~~~---~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~ 183 (432)
++..+-++..+++.+.+ ++++.+.+.|++.+ .+.....++++|+|||++|.++|++. ..++|..+..++++.+..
T Consensus 87 ~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~ 164 (417)
T COG2223 87 LLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAV 164 (417)
T ss_pred HHHHHHHHHHHHHccCCchHHHHHHHHHHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHH
Confidence 99999999999986555 99999999999865 67788899999999999999999999 888899888888888777
Q ss_pred CCC--chHHHHHhhHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCcc
Q 013992 184 APG--TWRWMLGVAGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSE 260 (432)
Q Consensus 184 ~~~--~wr~~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (432)
..+ .||....+..+..++..+. ++.+.|.|.. +...++.
T Consensus 165 ~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~--------------------------------------r~~~~~~ 206 (417)
T COG2223 165 AFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEH--------------------------------------RASVKPQ 206 (417)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhh--------------------------------------hcccccc
Confidence 655 3999988888877776666 6666666531 0111111
Q ss_pred c-hhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 013992 261 K-INLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRT 339 (432)
Q Consensus 261 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 339 (432)
. ...+.++++++.|...+. ++..+.++..+..++|.|++++.+.++.+++.......+.+.+.++.+|+++||+
T Consensus 207 ~~~~~~~v~~~~~~W~lsll-----Y~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~ 281 (417)
T COG2223 207 LPAQLKAVFSNKDTWLLSLL-----YFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI 281 (417)
T ss_pred chhHHHHHhcCcchHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc
Confidence 1 456678889999885554 3444557888999999999999999999999999999999999999999999999
Q ss_pred CCchhhHhHHHHHHHHHHHHHHHHhc
Q 013992 340 GRKKLLVISLSGVILSLGVLSAVFHE 365 (432)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (432)
|.+|.....+..++++..++......
T Consensus 282 Gg~rv~~~~f~~~~~~~~~l~~~~~~ 307 (417)
T COG2223 282 GGRRVTLAVFVGMALAAALLSLFLTG 307 (417)
T ss_pred cchhHHHHHHHHHHHHHHHHHccccc
Confidence 99999998888888888777766533
No 52
>PRK11043 putative transporter; Provisional
Probab=99.96 E-value=1e-27 Score=225.94 Aligned_cols=269 Identities=20% Similarity=0.201 Sum_probs=211.7
Q ss_pred hcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHh
Q 013992 40 GLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAA 119 (432)
Q Consensus 40 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 119 (432)
.....+....+.+.+|.+.+++|.++.+. +++.+++.++..++++++|+++||+|||+++..+..+..++.+++.++
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~s~~~~---g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 91 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQTSASAV---SASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWV 91 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCHHHH---HHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHh
Confidence 34455566778888899999999998888 999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHH
Q 013992 120 PNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPA 199 (432)
Q Consensus 120 ~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~ 199 (432)
++++.+++.|+++|++.+...+...+++.|++|+++|++..+.......+|..++|.+++++.+..+ ||+.|++.++..
T Consensus 92 ~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g-~~~~~~~~~~~~ 170 (401)
T PRK11043 92 ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFG-WQAIFATLFAIT 170 (401)
T ss_pred cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHHH
Confidence 9999999999999999888888888899999999999999999888889999999999999988877 999999988877
Q ss_pred HHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHHHHH
Q 013992 200 LLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRGLIA 279 (432)
Q Consensus 200 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (432)
++..+..++++|+++ +++ +++++.+.++.+|+++++...+.
T Consensus 171 ~~~~~~~~~~~~~~~----~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 211 (401)
T PRK11043 171 LLLILPTLRLKPSKK----ARK-----------------------------------QSQDALTFKQLLKSKTYLGNVLI 211 (401)
T ss_pred HHHHHHHHHcCCCCC----ccc-----------------------------------cchHHHHHHHHHcChhHHHHHHH
Confidence 777666666665532 000 00011244567777776654333
Q ss_pred HHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHHHH
Q 013992 280 GVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILSLG 357 (432)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 357 (432)
..... ..+.....+.|.++++.+ .++.+.+.......++.+++.++.+++.||+++|+..........++..
T Consensus 212 ~~~~~-----~~~~~~~~~~p~~~~~~g-~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~ 283 (401)
T PRK11043 212 FAACS-----AAFFAWLTGSPFILEQMG-YSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVI 283 (401)
T ss_pred HHHHH-----HHHHHHHHHhHHHHHHcC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 22211 133455567788887754 4567777777777788899999999999999988876655555444433
No 53
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.96 E-value=4.1e-27 Score=221.15 Aligned_cols=278 Identities=17% Similarity=0.176 Sum_probs=216.8
Q ss_pred hhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHH
Q 013992 39 GGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAA 118 (432)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 118 (432)
..+..........+.+|.+.+++|.++.+. ++..+.+.++..+++++.|+++||+|||++++.+.++..++.+++..
T Consensus 11 ~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~---~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~ 87 (392)
T PRK10473 11 LVLLYPAGIDMYLVGLPRIAADLNASEAQL---HIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSL 87 (392)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 334445555566688999999999988888 99999999999999999999999999999999999999999999999
Q ss_pred hCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHH
Q 013992 119 APNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIP 198 (432)
Q Consensus 119 ~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~ 198 (432)
+++++.+++.|+++|++.+...+....++.|++|+++|+++.++.+....+|..++|.+++.+.+..+ ||+.|++.++.
T Consensus 88 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g-~~~~~~~~~~~ 166 (392)
T PRK10473 88 AETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFP-WQSLFYTMAAM 166 (392)
T ss_pred hCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC-hHHHHHHHHHH
Confidence 99999999999999999999899999999999999999999999999999999999999998877766 99999998877
Q ss_pred HHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHHH
Q 013992 199 ALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRGL 277 (432)
Q Consensus 199 ~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (432)
.++..+. .+++||+++. +.+ ++....+..++.+++++++...
T Consensus 167 ~~i~~~~~~~~~~~~~~~-----~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~~ 209 (392)
T PRK10473 167 GILVLLLSLFILKETRPA-----RAP--------------------------------AASSKPRENSESLLNRFFLSRL 209 (392)
T ss_pred HHHHHHHHHHHcCCCCCc-----ccC--------------------------------CccchHHHHHHHHhCHHHHHHH
Confidence 7666555 5566776320 000 0000111234556777665544
Q ss_pred HHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHHHH
Q 013992 278 IAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILSLG 357 (432)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 357 (432)
+....... .......+.|.++++..+.++.+.+.......++.+++.++.+++.||+++|+.+..+..+..++..
T Consensus 210 ~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~ 284 (392)
T PRK10473 210 VITTLSVT-----VILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGI 284 (392)
T ss_pred HHHHHHHH-----HHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 43222211 2233444567777666556677778888888889999999999999999999998888877777666
Q ss_pred HHHHH
Q 013992 358 VLSAV 362 (432)
Q Consensus 358 ~~~~~ 362 (432)
.+...
T Consensus 285 ~~~~~ 289 (392)
T PRK10473 285 TLALS 289 (392)
T ss_pred HHHHH
Confidence 55554
No 54
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.96 E-value=4.2e-28 Score=227.98 Aligned_cols=263 Identities=17% Similarity=0.124 Sum_probs=203.5
Q ss_pred HHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHH
Q 013992 32 LAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFV 111 (432)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~ 111 (432)
.+....+......+......+.+|.+.+++|.++.+. +++.+.+.++..+++++.|+++||+|||++++.+..+..+
T Consensus 9 ~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~---~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~ 85 (394)
T PRK11652 9 LLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAV---QAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFIL 85 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHH
Confidence 3333333334555666677888999999999999888 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHH
Q 013992 112 GAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWM 191 (432)
Q Consensus 112 ~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~ 191 (432)
+.+++.++++++.+++.|++.|++.+...+....+..|.+++++|+++.+....+..++..++|.+++.+.+..+ ||+.
T Consensus 86 ~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g-~~~~ 164 (394)
T PRK11652 86 GTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFG-WRAC 164 (394)
T ss_pred HHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hHHH
Confidence 999999999999999999999999988888888889999999999999999999999999999999999988777 9999
Q ss_pred HHhhHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcc
Q 013992 192 LGVAGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKT 270 (432)
Q Consensus 192 f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (432)
|++.++..++..+. .++.||+++. ++. +++.....++.+++
T Consensus 165 f~~~~~~~~~~~~~~~~~~~~~~~~----~~~----------------------------------~~~~~~~~~~~~~~ 206 (394)
T PRK11652 165 YLFLLLLGAGVTFSMARWMPETRPA----DAR----------------------------------RTRVLASYRTLLSN 206 (394)
T ss_pred HHHHHHHHHHHHHHHHHhCCccCcc----ccc----------------------------------hhHHHHHHHHHHcC
Confidence 99988766655444 5567776421 000 00012234566777
Q ss_pred cchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC
Q 013992 271 RTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGR 341 (432)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~ 341 (432)
|+++...+..+.. +........+.+.++++..+.++.+.+.......++.+++..+.+++.||.++
T Consensus 207 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~ 272 (394)
T PRK11652 207 RRFNCYLLMLIGT-----LAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFST 272 (394)
T ss_pred hHHHHHHHHHHHH-----HHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7776544332221 12334444556677777556667777887777788888888888999998873
No 55
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.96 E-value=7.8e-28 Score=225.00 Aligned_cols=268 Identities=21% Similarity=0.219 Sum_probs=212.8
Q ss_pred eeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhH
Q 013992 45 YDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGA 124 (432)
Q Consensus 45 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~ 124 (432)
+...+..|.+|.+.+++|.++.+. +++.+++.++..++.++.|+++||+|||+++..+.++.+++.+++.++++++.
T Consensus 5 ~~~~~~~p~~~~~~~~~~~s~~~~---~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 81 (377)
T PRK11102 5 LAIDMYLPALPVIAADFGVSAGSV---QMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQ 81 (377)
T ss_pred hHHHHHhccHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHH
Confidence 344567789999999999998888 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHH
Q 013992 125 LITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFI 204 (432)
Q Consensus 125 ~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~ 204 (432)
+++.|+++|++.+...+...+++.|++|+++|++++++.+....+|..+++.+++.+.+..+ ||+.|++.++..++..+
T Consensus 82 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~ 160 (377)
T PRK11102 82 LIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFS-WHAIFWVLALAAILAAA 160 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-hHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988776 99999998877776655
Q ss_pred H-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHHHHHHHHH
Q 013992 205 L-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRGLIAGVGL 283 (432)
Q Consensus 205 ~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (432)
. .+++||+++. ++.++ .+.++...+.++.+++++++...+...
T Consensus 161 ~~~~~~~~~~~~----~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 204 (377)
T PRK11102 161 LVFFFIPETLPK----ERRQP------------------------------FHLRTTIRNFASLFRHKRVLGYMLASG-- 204 (377)
T ss_pred HHHHhCCccCcc----cccCC------------------------------CChHHHHHHHHHHHcChHHHHHHHHHH--
Confidence 5 5566775321 00000 000001123456777777654333221
Q ss_pred HHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHH
Q 013992 284 QVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILS 355 (432)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 355 (432)
..+........+.|.+..+..+.++.+.+.......++.+++.++.+++.||+++|+.+..+.....+.
T Consensus 205 ---~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~ 273 (377)
T PRK11102 205 ---FSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIM 273 (377)
T ss_pred ---HHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 222234455556677776665666788888888999999999999999999999999888877654443
No 56
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.3e-27 Score=223.34 Aligned_cols=276 Identities=20% Similarity=0.225 Sum_probs=220.0
Q ss_pred hhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhC--ChhHHHHHHhhhhcc
Q 013992 58 RDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAP--NPGALITGRVFVGLG 135 (432)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~ 135 (432)
..+++.+..+. +++.+.++.|+.+++++.|+++||+|-|+++..+.++.++++++...+. +++.+++.|++||++
T Consensus 65 ~~~~~ws~~~k---~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~ 141 (466)
T KOG2532|consen 65 AGEYDWSSTEK---GLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLG 141 (466)
T ss_pred CceecCCHHHH---HHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHH
Confidence 34677888888 9999999999999999999999999999999999999999999988764 556789999999999
Q ss_pred ccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCC-CCchHHHHHhhHHHHHHHHHHHhh-cCCCH
Q 013992 136 VGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRA-PGTWRWMLGVAGIPALLQFILMLL-LPESP 213 (432)
Q Consensus 136 ~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~-~~~wr~~f~~~~~~~~~~~~~~~~-~~e~~ 213 (432)
.|..+|....+.+.|.|++||++..++...+..+|.+++.++++++.+. .| |++.|++.+..+++..+++++ ..|+|
T Consensus 142 ~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~G-W~sifY~~g~~g~i~~~~w~~~~~d~P 220 (466)
T KOG2532|consen 142 QGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLG-WPSIFYVFGIVGLIWFILWFLFYSDSP 220 (466)
T ss_pred HhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCC-CchHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 9999999999999999999999999999999999999999999999998 66 999999999999988888554 56666
Q ss_pred HHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHHHHHHHHHHHHhhhcchH
Q 013992 214 RWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRGLIAGVGLQVFQQFVGIN 293 (432)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (432)
.. .+.-..+|. +.+.+...+ ++.++..+.+++++++++.+|...+..+ +...++.
T Consensus 221 ~~-h~~is~~El-----------------~~I~~~k~~--~~~~~~~~vP~~~i~ts~~vwai~~~~f-----~~~~~~~ 275 (466)
T KOG2532|consen 221 SK-HPNISEKEL-----------------KYIEKGKSE--AHVKKKPPVPYKAILTSPPVWAIWISAF-----GGNWGFY 275 (466)
T ss_pred cc-CCCCCHHHH-----------------HHHHhcccc--cccCCCCCCCHHHHHcCHHHHHHHHHHH-----HHHHHHH
Confidence 42 111111221 111111111 1111125778999999999987555544 4444889
Q ss_pred HHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC---------chhhHhHHHHHHHHHHHHHHH
Q 013992 294 TVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGR---------KKLLVISLSGVILSLGVLSAV 362 (432)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~---------~~~~~~~~~~~~~~~~~~~~~ 362 (432)
.+..|.|.|+++..+.+..+.|+++.+..+...+..+++|.++||+.+ |..-.++....+++++.+.+.
T Consensus 276 ~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~ 353 (466)
T KOG2532|consen 276 LLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFT 353 (466)
T ss_pred HHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeec
Confidence 999999999999999999999999999999999999999999999865 223334444444444444444
No 57
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.96 E-value=3.4e-28 Score=229.07 Aligned_cols=325 Identities=16% Similarity=0.128 Sum_probs=220.4
Q ss_pred HHHHHHHhhcccceeccccchhhhh-hhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHH
Q 013992 32 LAFSAGIGGLLFGYDTGVISGALLY-IRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFF 110 (432)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~ 110 (432)
.+..+++..++..++..+..+.+|. +.+++|.++.+. +++.+++.+++.+++++.|+++||+|||++++.+.++++
T Consensus 16 ~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~---g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~ 92 (399)
T PRK05122 16 RIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLA---GLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCA 92 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHH---HHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHH
Confidence 4444566667777778888888887 578899988888 999999999999999999999999999999999999888
Q ss_pred HHHHHHHHh---C-----ChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhcc
Q 013992 111 VGAVIMAAA---P-----NPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFT 182 (432)
Q Consensus 111 ~~~~~~~~~---~-----~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~ 182 (432)
++.+.+.++ + +++.+++.|+++|++.+...+....++.|++|+|+|++++++...+..+|..+++.+++.+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~ 172 (399)
T PRK05122 93 LSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLY 172 (399)
T ss_pred HHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHH
Confidence 877665543 2 56688999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCchHHHHHhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccch
Q 013992 183 RAPGTWRWMLGVAGIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKI 262 (432)
Q Consensus 183 ~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (432)
+..+ ||+.+++.++..++..+.....|++++ .+. ++.
T Consensus 173 ~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-------------------------------------~~~ 209 (399)
T PRK05122 173 HWGG-LAGLGLLIMLLALLGLLLARPRPAVPP-----VKG-------------------------------------ERL 209 (399)
T ss_pred Hccc-HHHHHHHHHHHHHHHHHHHhcCCCCCC-----CCc-------------------------------------cch
Confidence 8777 999988776655444333322233211 000 000
Q ss_pred hHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCc
Q 013992 263 NLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRK 342 (432)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 342 (432)
+.++.++ +.+........ ....+.....+.+.|.++.+.. ..+.......++.+++.++.+++.||+++|
T Consensus 210 ~~~~~~~--~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~ 279 (399)
T PRK05122 210 PFRRVLG--RVWPYGMGLAL-----ASIGFGTIATFITLYYAARGWD---GAALALTLFGVAFVGARLLFGNLINRLGGL 279 (399)
T ss_pred hHHHHHH--HHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHcccc---cchHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 1111111 11111111111 1113344556677777665432 234455566778889999999999999999
Q ss_pred hhhHhHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccccccccccccCccchhhhhccCCCCcccccccccc
Q 013992 343 KLLVISLSGVILSLGVLSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCASHSNK 420 (432)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~~~~~ 420 (432)
+.+..+..+..++..++.... +.+......++.+++.....+..... .....|++.|++ ..|+.+...+.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~G~~~~~~~~~~~~~---~~~~~~~~~~g~--~~g~~~~~~~~ 349 (399)
T PRK05122 280 RVAIVSLLVEILGLLLLWLAP---SPWMALIGAALTGFGFSLVFPALGVE---AVKRVPPQNRGA--ALGAYSVFLDL 349 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHhHHHHHHHHHHH---HHHhCCHHHHHH--HHHHHHHHHHH
Confidence 988887777666655544321 22222222233333322222222221 223456689999 88876555443
No 58
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.95 E-value=1.6e-27 Score=223.63 Aligned_cols=283 Identities=13% Similarity=0.094 Sum_probs=214.5
Q ss_pred HHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHH
Q 013992 33 AFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVG 112 (432)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 112 (432)
+..++...+..++.....++..|.+++++|.++.+. +++.+.+.+++.+++++.|++.||+|||++++.+.++++++
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~---g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g 81 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQA---ALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALG 81 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHH
Confidence 445666777888888888999999999999998888 99999999999999999999999999999999999999999
Q ss_pred HHHHHH---hCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCC----
Q 013992 113 AVIMAA---APNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAP---- 185 (432)
Q Consensus 113 ~~~~~~---~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~---- 185 (432)
.++... .++++.+++.|++.|+|.|...+....++.+..|+++|++.+++.+....+|..+++.+++.+....
T Consensus 82 ~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~ 161 (410)
T TIGR00885 82 AFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQ 161 (410)
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 888644 4689999999999999999999999999999999999999999999999999999999988774321
Q ss_pred ---------------------CchHHHHHhhHHHHHHHHHHHhh--cCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHH
Q 013992 186 ---------------------GTWRWMLGVAGIPALLQFILMLL--LPESPRWLYRKGREEEAQAILRKVYPAHEVETEI 242 (432)
Q Consensus 186 ---------------------~~wr~~f~~~~~~~~~~~~~~~~--~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (432)
.+||+.|++.+++.++..++..+ .||.++ + +
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~------~-~------------------- 215 (410)
T TIGR00885 162 SQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNH------S-D------------------- 215 (410)
T ss_pred hhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc------c-c-------------------
Confidence 14999999888876665544433 333210 0 0
Q ss_pred HHHHHHhHHHHHHccCccchhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcC-CCchhHHHHHHHHH
Q 013992 243 RDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSG-FASNRTALLLSLVT 321 (432)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 321 (432)
+++.+.....++.+|+|+++...+..++ +.........+.+.|.++.+ +.+...+.......
T Consensus 216 ------------~~~~~~~~~~~~~~~~~~~~~~~l~~f~-----yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~ 278 (410)
T TIGR00885 216 ------------AKQISFSASLSRLARIRHYREGVIAQFF-----YVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGA 278 (410)
T ss_pred ------------cccccchhhHHHHHhChhHHHHHHHHHH-----HHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHH
Confidence 0000111133467788877664333222 22244455677888887643 33333334444445
Q ss_pred HHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHHHHHHHH
Q 013992 322 SGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILSLGVLSA 361 (432)
Q Consensus 322 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 361 (432)
..+..+|+++++++.||+++|+.+.++..+..+.+++...
T Consensus 279 ~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~ 318 (410)
T TIGR00885 279 MVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIF 318 (410)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 5778999999999999999999888877776666555554
No 59
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.95 E-value=4.2e-27 Score=220.39 Aligned_cols=298 Identities=21% Similarity=0.185 Sum_probs=230.0
Q ss_pred HHHHHHHHHhhcccceeccccch-hhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHH
Q 013992 30 LRLAFSAGIGGLLFGYDTGVISG-ALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFL 108 (432)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~ 108 (432)
+.++..+++..+....+...++. .+..+.+|.+....+. +.+.+++.++++++.++++.+.||++..+.+....++
T Consensus 44 l~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l---~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~ 120 (495)
T KOG2533|consen 44 LFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQL---GVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGIL 120 (495)
T ss_pred HHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhh---hhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHH
Confidence 34455566666777777654433 3333557888877888 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccC-----
Q 013992 109 FFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTR----- 183 (432)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~----- 183 (432)
+++..++.....|++.+++.|++.|+..+..+|....+++.|+.+++|++.++++.+...+|.++|.+++..+.+
T Consensus 121 w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~ 200 (495)
T KOG2533|consen 121 WGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSG 200 (495)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCC
Confidence 999998888899999999999999999999999999999999999999999999999999999999999988632
Q ss_pred -CCCchHHHHHhhHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHH--HHccCc
Q 013992 184 -APGTWRWMLGVAGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEI--EEEGSS 259 (432)
Q Consensus 184 -~~~~wr~~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 259 (432)
.. +|||.|++.++++++..++ ++++|+.|.-. +-.+.+|.. ...+..++.+ ...++.
T Consensus 201 ~~~-gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~-~fl~~~ek~-----------------~~~~~~~~~~~~~~~~~~ 261 (495)
T KOG2533|consen 201 GLA-GWRWLFIIEGVITLVLGIVVFFFLPDNPSKA-WFLTDEEKE-----------------LVVERLRESPSGGIENKF 261 (495)
T ss_pred CcC-CceeehhHHHHHHHHHHheEEEEecCChhhc-cccchHHHH-----------------HHHHHHHhccCCCccccc
Confidence 23 5999999999988887766 77789987511 000011100 0000011010 111115
Q ss_pred cchhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 013992 260 EKINLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRT 339 (432)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 339 (432)
++...++.+++|..|...+..++... ..+++.+|+|.++.+..+.+..++..+..+..++++++.++.|+++||.
T Consensus 262 ~~~~~~~a~~dp~vw~~~l~~~~~~l-----v~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~ 336 (495)
T KOG2533|consen 262 KWKGFKEALKDPGVWPFSLCYFFLKL-----VNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRL 336 (495)
T ss_pred CHHHHHHHHhchhHHHHHHHHHHHhh-----ccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHH
Confidence 66788999999999886665544444 7788999999999996567789999999999999999999999999994
Q ss_pred ----CCchhhHhHHHHHHH
Q 013992 340 ----GRKKLLVISLSGVIL 354 (432)
Q Consensus 340 ----~~~~~~~~~~~~~~~ 354 (432)
.+|........+...
T Consensus 337 ~~~~~~~~~~~~~~~~~~~ 355 (495)
T KOG2533|consen 337 KTIFARRLLFIVFLCLYAI 355 (495)
T ss_pred hhhHHHHHHHHHHHHHHHH
Confidence 445444444443333
No 60
>PRK12382 putative transporter; Provisional
Probab=99.95 E-value=1.7e-27 Score=223.79 Aligned_cols=321 Identities=14% Similarity=0.119 Sum_probs=211.8
Q ss_pred HHHhhcccceeccccchhhhh-hhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHH
Q 013992 36 AGIGGLLFGYDTGVISGALLY-IRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAV 114 (432)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 114 (432)
+.++.++.........+.+|. +.+|+|.+..+. +++.+.+.+++.+++++.|+++||+||||+++.+.+...++.+
T Consensus 20 ~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~---g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~ 96 (392)
T PRK12382 20 IAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMV---GIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGL 96 (392)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHH---HHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHH
Confidence 333445555556667778885 578999998888 9999999999999999999999999999999999888776654
Q ss_pred HHH---H-----hCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 013992 115 IMA---A-----APNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPG 186 (432)
Q Consensus 115 ~~~---~-----~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~ 186 (432)
... . .+|++.+++.|+++|++.+...+...+++.|++|+|+|++++++.+.+...|..++|.+++++.+..+
T Consensus 97 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g 176 (392)
T PRK12382 97 AYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFG 176 (392)
T ss_pred HHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 332 2 35788999999999999998888888999999999999999999999999999999999999888777
Q ss_pred chHHHHHhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHH
Q 013992 187 TWRWMLGVAGIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVK 266 (432)
Q Consensus 187 ~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (432)
||+.+.+..+..++........||.++ + + ++ +.+.++
T Consensus 177 -~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~--------------------------------~~---~~~~~~ 213 (392)
T PRK12382 177 -FAALALTTMVLPLLAWAFNGTVRKVPA------H-A--------------------------------GE---RPSLWS 213 (392)
T ss_pred -hHHHHHHHHHHHHHHHHHHHhccCCCC------C-c--------------------------------cc---CchHHH
Confidence 998877655443333222222233211 0 0 00 000111
Q ss_pred hhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhH
Q 013992 267 LLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLV 346 (432)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~ 346 (432)
.++ .++...+..+.. .........+.|.|+++.+.. ..+.......++.++++++.|++.||+++|+.+.
T Consensus 214 ~~~--~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~ 283 (392)
T PRK12382 214 VVG--LIWKPGLGLALQ-----GVGFAVIGTFVSLYFASKGWA---MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAI 283 (392)
T ss_pred HHH--HHHHhHHHHHHH-----HHHHhHHHHHHHHHHHhcCCc---hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehH
Confidence 111 111111111111 113445566777787765433 2344555667777899999999999999999988
Q ss_pred hHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccccccccccccCccchhhhhccCCCCcccccccccc
Q 013992 347 ISLSGVILSLGVLSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCASHSNK 420 (432)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~~~~~ 420 (432)
.+..+..++..++... .+.+......++.+.......+.... ......|++.|++ +.|+.+...+.
T Consensus 284 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~g~~~~~~~~~~~~---~~~~~~~~~~~g~--~~g~~~~~~~~ 349 (392)
T PRK12382 284 VSLLVETVGLLLLWLA---PTAWVALAGAALTGAGCSLIFPALGV---EVVKRVPSQVRGT--ALGGYAAFQDI 349 (392)
T ss_pred HHHHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHHhHHHHHHH---HHHHhcCHHHHHH--HHHHHHHHHHH
Confidence 8877777766554432 12221222222222222222222222 2223455688999 88887665544
No 61
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.95 E-value=1.5e-27 Score=223.19 Aligned_cols=271 Identities=13% Similarity=0.055 Sum_probs=202.2
Q ss_pred HHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHH
Q 013992 36 AGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVI 115 (432)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 115 (432)
++++.++..+.........+.+.++++.+..+. +++.+.+.+++.+.+++.|+++||+|||++++.+.++.++++++
T Consensus 8 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~---~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~ 84 (393)
T PRK11195 8 IMAAQFFSALADNALLFAAIALLKELHYPDWSQ---PLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLL 84 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH---HHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHH
Confidence 344555555544445566667788888877776 99999999999999999999999999999999999999999888
Q ss_pred HHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhh
Q 013992 116 MAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVA 195 (432)
Q Consensus 116 ~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~ 195 (432)
++++.+. ++.|+++|++.+...|...+++.|++|+++|++++++.+....+|..+||.+++++.+. .|+..+.+.
T Consensus 85 ~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~--~~~~~~~i~ 159 (393)
T PRK11195 85 MLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP--HAEAALAVC 159 (393)
T ss_pred HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHH
Confidence 8777664 78899999999999999999999999999999999999999999999999999999875 378777777
Q ss_pred HHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhH
Q 013992 196 GIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRR 275 (432)
Q Consensus 196 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (432)
+...++..+..+.+||+|+...++ +.++. . ..++ .....+.++++|.++.
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~--------------~----~~~~-----------~~~~~~~l~~~~~~~~ 209 (393)
T PRK11195 160 ALIYLLAALFNLFIPRLGARRPGQ-SWNPI--------------A----LLRD-----------FFHACRVLWRDKLGRF 209 (393)
T ss_pred HHHHHHHHHHHhcCCCCccccccc-CCCHH--------------H----HHHH-----------HHHHHHHHHhCchhHH
Confidence 665555555566778765311000 00000 0 0000 0011246677777665
Q ss_pred HHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHH
Q 013992 276 GLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISL 349 (432)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~ 349 (432)
.......... ......+..|.++++..+.++.+.+.......++.+++.+..+++.||.++++.+..+.
T Consensus 210 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~ 278 (393)
T PRK11195 210 SLAGTTLFWG-----AGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI 278 (393)
T ss_pred HHHHHHHHHH-----HHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH
Confidence 4333222221 23344455667777777777888999999999999999999999999988887776664
No 62
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.95 E-value=6.8e-28 Score=229.73 Aligned_cols=364 Identities=11% Similarity=-0.002 Sum_probs=235.8
Q ss_pred ChhHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHH
Q 013992 26 NPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVA 105 (432)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~ 105 (432)
..++|.++..+++.......+...++..+|.+.+++|.+..+. +++.+.+.++..++.++.|+++||+|||++++.+
T Consensus 14 ~~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~---~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~ 90 (455)
T TIGR00892 14 GGWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSET---AWISSIMLAVLYAGGPISSILVNRFGCRPVVIAG 90 (455)
T ss_pred CCcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHH---HHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhh
Confidence 3556777777666666555556667888999999999999888 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCChhHHHH-HHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCC
Q 013992 106 DFLFFVGAVIMAAAPNPGALIT-GRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRA 184 (432)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~-~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~ 184 (432)
.++.++++++++++++++.+++ .|+++|++.+...+....++.|+++ ++|+++.++...+..+|..+++.+++.+.+.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~ 169 (455)
T TIGR00892 91 GLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFES 169 (455)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 9999999999999999998865 5699999999877777788899996 6799999999999999999999999998887
Q ss_pred CCchHHHHHhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhH
Q 013992 185 PGTWRWMLGVAGIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINL 264 (432)
Q Consensus 185 ~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (432)
.+ ||+.|++.+++.++..+..+++.+.++... +.+.++.+ .....+..++ ... ....++..+...
T Consensus 170 ~g-wr~~f~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~--------~~~-~~~~~~~~~~~~ 234 (455)
T TIGR00892 170 FG-WRGSFLILGGLLLHCCVCGALMRPVGPSQR-VSKSKSKE----GLPPDGSTKK--------LSK-KSTAEKINRFLD 234 (455)
T ss_pred hC-hHHHHHHHHHHHHHHHHHHHHhCCCCcccc-cccccccc----cCCCCCcccc--------ccc-cchhhhhhhhcc
Confidence 77 999999999877766555444432211000 00000000 0000000000 000 000000011112
Q ss_pred HHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhh--CCc
Q 013992 265 VKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRT--GRK 342 (432)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--~~~ 342 (432)
.+.+++|.++......+.... .......+.|.|.++. +.+..+++....+.+++.++++++.+++.||. ++|
T Consensus 235 ~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~l~~~~~~~-g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 308 (455)
T TIGR00892 235 FSLFTHRGFLVYLSGNVIMFL-----GFFAPIIFLVPYAKDK-GVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPH 308 (455)
T ss_pred hHHhcCchHHHHHHHHHHHHH-----HccchHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHH
Confidence 357788887654443322222 4455566788888875 45577888888888999999999999999974 333
Q ss_pred hhhHhHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccccccccccccCccchhhhhccCCCCcccccccccc
Q 013992 343 KLLVISLSGVILSLGVLSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCASHSNK 420 (432)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~~~~~ 420 (432)
+...+.......+...+.... ..+.+...+..+..++......+.......+ .+|++.+++ +.|+.+...+.
T Consensus 309 ~~~~~~~~~~~~~l~~ll~~~-~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~---~~~~~~~g~--~~g~~~~~~~l 380 (455)
T TIGR00892 309 VQYLFSFALLFNGLTHLLCAL-AGDYTGLVIYCIFFGLSFGSVGALLFEVLMD---LVGAQRFSS--AVGLVTIVECC 380 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hchHHHHHHHHHHHHHHhchHHHHHHHHHHH---HhhHHHHhh--HHhHHHHHHHH
Confidence 333333222222222111111 1222222233333333322222222222223 345588888 88877655444
No 63
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.95 E-value=6.7e-26 Score=211.88 Aligned_cols=274 Identities=16% Similarity=0.166 Sum_probs=207.1
Q ss_pred HHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHH
Q 013992 33 AFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVG 112 (432)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 112 (432)
+..+.++.++...+....++.+|.+.+++|.+..+. |++.+.+.+++.+++++.|+++||+|||+++..+.++.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~---G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~ 84 (381)
T PRK03633 8 VLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQV---GVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAG 84 (381)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHH---HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455556677788888999999999999999988888 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHH
Q 013992 113 AVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWML 192 (432)
Q Consensus 113 ~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f 192 (432)
..++++++|++.+++.|+++|++.+...+.....+.|..++++|+++++.+..+..+|..+|+.+++.+.+... |...+
T Consensus 85 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-~~~~~ 163 (381)
T PRK03633 85 CAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELM-SVLPW 163 (381)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc-chHHH
Confidence 99999999999999999999999998888888888899999999999999999999999999999999876532 32222
Q ss_pred HhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccc
Q 013992 193 GVAGIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRT 272 (432)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (432)
..+........ .++.+.+|+ +. + +++..+.++.+++|.
T Consensus 164 -~~~~~~~~~~~-~~~~~~~~~----~~---------------------------------~---~~~~~~~~~~~~~~~ 201 (381)
T PRK03633 164 -VTGLVLAAILP-LLFTRILNQ----QA---------------------------------E---NHDSTSIWPMLKLRQ 201 (381)
T ss_pred -HHHHHHHHHHH-HHHhcccCC----CC---------------------------------C---CCCCCCHHHHHHhcc
Confidence 22222211111 112111110 00 0 001123456677777
Q ss_pred hhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHH
Q 013992 273 VRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGV 352 (432)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 352 (432)
++......+. ....+.....+.|.|+++.+ .++...+.......++.+++++..|++.||+++|+.+..+....
T Consensus 202 ~~~~~~~~~~-----~~~~~~~~~~~lp~~~~~~g-~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~ 275 (381)
T PRK03633 202 ARLGVNGCII-----SGIVLGSLYGLMPLYLNHQG-MSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVV 275 (381)
T ss_pred hHHHHHHHHH-----HHHHHHHHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHH
Confidence 6643222111 11133455567899988764 44666777777888889999999999999999999888777766
Q ss_pred HHHHHH
Q 013992 353 ILSLGV 358 (432)
Q Consensus 353 ~~~~~~ 358 (432)
.++...
T Consensus 276 ~~~~~~ 281 (381)
T PRK03633 276 ILGSIA 281 (381)
T ss_pred HHHHHH
Confidence 665543
No 64
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.95 E-value=2.9e-27 Score=231.77 Aligned_cols=305 Identities=15% Similarity=0.116 Sum_probs=225.4
Q ss_pred HHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHH
Q 013992 34 FSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGA 113 (432)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 113 (432)
+..++..+...+..+..+..++.+.++|+++..+. |++.+.+.++++++.++.++++||+|||+.+.++.+++++++
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~---G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ 112 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSS---GLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGS 112 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcc---eeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHH
Confidence 44445667777778889999999999999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHhC---------------------------------------------------ChhHHHHHHhhhhccccchhhh
Q 013992 114 VIMAAAP---------------------------------------------------NPGALITGRVFVGLGVGMASMT 142 (432)
Q Consensus 114 ~~~~~~~---------------------------------------------------~~~~~~~~r~l~G~~~~~~~~~ 142 (432)
+++++.+ .+..++++|+++|+|.+..++.
T Consensus 113 ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~ 192 (633)
T TIGR00805 113 FLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPL 192 (633)
T ss_pred HHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhc
Confidence 9987652 2456789999999999999999
Q ss_pred HHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCC---------------------CchHHHHHhhHHHHHH
Q 013992 143 SPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAP---------------------GTWRWMLGVAGIPALL 201 (432)
Q Consensus 143 ~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~---------------------~~wr~~f~~~~~~~~~ 201 (432)
..+++.|++|+++|+++++++.....+|..+|+++++++.+.. +.|+..|++.+++.++
T Consensus 193 ~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l 272 (633)
T TIGR00805 193 GISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALL 272 (633)
T ss_pred CchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999887542 1267778888887777
Q ss_pred HHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHHHHHHH
Q 013992 202 QFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRGLIAGV 281 (432)
Q Consensus 202 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (432)
..+.++++|++.+...++.+.++.++. .... .+ ++. .....+..++.+...++++++|.++...+..+
T Consensus 273 ~~v~l~~~p~~lp~~~~~~~~~~~~~~--~~~~-~~-~~~--------~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~ 340 (633)
T TIGR00805 273 TSIPFFFFPKALPKEGKRVNVDVHETE--KLEK-SE-DKS--------RKKNSDITKDFPKIIKRLLCNPIYMLVILAQV 340 (633)
T ss_pred HHHHHHhCccccCCcccccchhhhhhh--cccc-cc-ccc--------chhhhhhHHHHHHHHHHHHcCcHHHHHHHHHH
Confidence 666667777652200000000000000 0000 00 000 00000001112345678999998877655544
Q ss_pred HHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHH-HHHHHHHHHHHHHhhhCC--chhhHhHHHHHHHHHHH
Q 013992 282 GLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSG-LNAAGSIVSIYFIDRTGR--KKLLVISLSGVILSLGV 358 (432)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~~~--~~~~~~~~~~~~~~~~~ 358 (432)
+... .++.+..+.|.|+++..+.++.+++.+.....+ +.+++.+++|+++||++. |+.+..+.....+++++
T Consensus 341 ~~~~-----~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 341 IDSL-----AFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHH-----HHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 4333 677888899999998888888888888776655 568999999999999984 46666666655555444
No 65
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.95 E-value=2.5e-27 Score=221.47 Aligned_cols=269 Identities=16% Similarity=0.121 Sum_probs=199.3
Q ss_pred hcccceeccccchhhhh-hhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHH-HHHHHHHHHHHHH
Q 013992 40 GLLFGYDTGVISGALLY-IRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILV-ADFLFFVGAVIMA 117 (432)
Q Consensus 40 ~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~-~~~~~~~~~~~~~ 117 (432)
++..++......+.+|. +.+++|.++.+. +++.+.+.+...+.+++.|+++||+||||.++. +..+..++.++++
T Consensus 6 ~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~---g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~ 82 (375)
T TIGR00899 6 AFLTGIAGALQFPTLSLFLSEEVRARPAMI---GLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFA 82 (375)
T ss_pred HHHHHHHHHHHhhHHHHHHHcccCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHH
Confidence 45556666777787776 568899998888 999999999999999999999999999887654 5666667778889
Q ss_pred HhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhH--HHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhh
Q 013992 118 AAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGAL--VSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVA 195 (432)
Q Consensus 118 ~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~--~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~ 195 (432)
+++|++.+++.|+++|.+.+...|...++..|+.|+++|++. .+....+.++|..+++.+++.+.+..+ ||+.|++.
T Consensus 83 ~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~-~~~~f~~~ 161 (375)
T TIGR00899 83 WNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFG-FTVMFLTA 161 (375)
T ss_pred hcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcc-cHHHHHHH
Confidence 999999999999999988888888888889999888777754 577788889999999999999988777 99999999
Q ss_pred HHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchh
Q 013992 196 GIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVR 274 (432)
Q Consensus 196 ~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (432)
++..++..+. ++++||+|+... .+ ++..+.++.+++++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~----~~-----------------------------------~~~~~~~~~~~~~~~~ 202 (375)
T TIGR00899 162 ALAFVLCGVLVWLFLPSYPRGAP----GA-----------------------------------LTRLEVRGLLASRDTR 202 (375)
T ss_pred HHHHHHHHHHHHHhCCCcccCcc----cc-----------------------------------cCcchhhhhhcCcchH
Confidence 8877666655 555788653100 00 0001122355666665
Q ss_pred HHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHH
Q 013992 275 RGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVIL 354 (432)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 354 (432)
......+.... .......+.|.++++..+.++.+.+..........+++.++.|++.||+++|+.+..+.....+
T Consensus 203 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~ 277 (375)
T TIGR00899 203 LLFVACTLMWG-----CNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVA 277 (375)
T ss_pred HHHHHHHHHHH-----HHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHH
Confidence 43333222211 2333445667787666566677777777666667788889999999999999988776655444
Q ss_pred HH
Q 013992 355 SL 356 (432)
Q Consensus 355 ~~ 356 (432)
..
T Consensus 278 ~~ 279 (375)
T TIGR00899 278 FY 279 (375)
T ss_pred HH
Confidence 43
No 66
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.95 E-value=6.8e-27 Score=219.98 Aligned_cols=254 Identities=15% Similarity=0.043 Sum_probs=185.9
Q ss_pred cchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHH---H-hCChhHH
Q 013992 50 ISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMA---A-APNPGAL 125 (432)
Q Consensus 50 ~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~-~~~~~~~ 125 (432)
....++.+.+|+|.+..+. +++.+.+.+++.+++++.|+++||+|||+++..+..+.+++++++. . .++++.+
T Consensus 32 ~~~~~~~~~~~~g~s~~~~---g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 108 (402)
T TIGR00897 32 EQGWLSPFLKALGLSPQQS---ASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLI 108 (402)
T ss_pred HHHhHHHHHHHhCCCHHHh---HHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHH
Confidence 3345566668899998888 9999999999999999999999999999999999999998876653 3 3578888
Q ss_pred HHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHH-HHHHHHHhhccCCCCchHHHHHhhHHHHHHHHH
Q 013992 126 ITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQ-FLSYLINLAFTRAPGTWRWMLGVAGIPALLQFI 204 (432)
Q Consensus 126 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~-~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~ 204 (432)
++.|+++|++.+...+.....+.|++|+++|++++++.+.+..+|. .+++.+++++.+..+ |+..++.......+..+
T Consensus 109 ~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g-~~~~~~~~~~~~~~~~~ 187 (402)
T TIGR00897 109 LLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFG-EMNTLWSALAFVLTGGV 187 (402)
T ss_pred HHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-hHHHHHHHHHHHHHHHH
Confidence 9999999999988888888889999999999999999999999997 589999988887766 76655544433333333
Q ss_pred H-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHHHHHHHHH
Q 013992 205 L-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRGLIAGVGL 283 (432)
Q Consensus 205 ~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (432)
+ .++.+|.++.. +.+ + +++.++.+...++++|+|+++...+..+
T Consensus 188 ~~~~~~~~~~~~~--~~~-~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 232 (402)
T TIGR00897 188 IALFSNKDIFTPQ--HMQ-T------------------------------REKFSELGKAATILFTNPNVLLGGMVRI-- 232 (402)
T ss_pred HHHhccCCCCCcc--ccc-C------------------------------CcchhhHHHHHHHHHcChhHHHHHHHHH--
Confidence 3 33344431100 000 0 0000001123456788888765444322
Q ss_pred HHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhH
Q 013992 284 QVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLV 346 (432)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~ 346 (432)
+.....+....+.|.|.++.+. +..+.+.......++.+++.+..|+++||++||+...
T Consensus 233 ---~~~~~~~~~~~~~p~~~~~~g~-s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~ 291 (402)
T TIGR00897 233 ---INTIGLFGFAVFLPMFVAELGF-STSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVR 291 (402)
T ss_pred ---HHHHHHHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHH
Confidence 2233556677889999887544 4566677777778899999999999999999888764
No 67
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.95 E-value=2.4e-28 Score=216.75 Aligned_cols=386 Identities=17% Similarity=0.195 Sum_probs=255.5
Q ss_pred ChhHHHHHHHHHHhhcccceeccccchhhhhhhhcc-ccch----hhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchH
Q 013992 26 NPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDF-KSVD----RKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRT 100 (432)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~----~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~ 100 (432)
.++..+.+.+...+.+.+.+|...++.+.|.+...| +.+. ...-..+.+..+-.+|..+|++++|+++||+|||+
T Consensus 36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~ 115 (538)
T KOG0252|consen 36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKK 115 (538)
T ss_pred hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchh
Confidence 567778888889999999999999999999877554 3221 11112288889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhC-------ChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHH
Q 013992 101 SILVADFLFFVGAVIMAAAP-------NPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFL 173 (432)
Q Consensus 101 ~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i 173 (432)
++...++++.+++++++++. -..++.+.|+++|+|.|+-+|...+..+|..-++.||...+...+.+.+|...
T Consensus 116 vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gila 195 (538)
T KOG0252|consen 116 VYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILA 195 (538)
T ss_pred hhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhh
Confidence 99999999999999887753 24678889999999999999999999999999999999888887777777776
Q ss_pred HHHHHhhccC----CCC----------chHHHHHhhHHHHHHHHHHHhhcCCCHHHHHHcC-CHHHHHHHHHHhCCCCch
Q 013992 174 SYLINLAFTR----APG----------TWRWMLGVAGIPALLQFILMLLLPESPRWLYRKG-REEEAQAILRKVYPAHEV 238 (432)
Q Consensus 174 ~~~i~~~l~~----~~~----------~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 238 (432)
|.+++-.+.. ..+ -||..|.+.+++.+......+.+||++++..... +.+.+.+..++....
T Consensus 196 G~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~--- 272 (538)
T KOG0252|consen 196 GGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSV--- 272 (538)
T ss_pred ccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhcccccccc---
Confidence 6665544332 111 4999999999999888888889999998763332 222222111111111
Q ss_pred HHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHH---
Q 013992 239 ETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTAL--- 315 (432)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 315 (432)
+.+. ++..+...+..+.....+.+.+..+.. + .+...+...|..-.+++....+....++..+..+..+..
T Consensus 273 ~~~~----~~~~~~~~~~~~~~~~~F~~~f~~~hg-~-~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~ 346 (538)
T KOG0252|consen 273 DIEA----ESTAESDVPPPSNSFGLFSRLFLRWHG-K-HLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHEL 346 (538)
T ss_pred ccch----hhccccCCCCcccccchHHHHHHHHHH-H-HHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHH
Confidence 0000 000000000001111112222222211 2 223333344444556777777778888765544322211
Q ss_pred -----HHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHHHHHHHHHHhc-cCCC-CCccchhcccccccccccc
Q 013992 316 -----LLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILSLGVLSAVFHE-TTSH-SPMVSAVETSHFSNLTCPD 388 (432)
Q Consensus 316 -----~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~ 388 (432)
...++.....++|..+..+++|++|||+..+.++.++.+..+.+...... .... ..+..++...+........
T Consensus 347 ~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~t 426 (538)
T KOG0252|consen 347 FKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNAT 426 (538)
T ss_pred HHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCce
Confidence 12222233344566777788999999999999999999988877765542 2222 2223333333334455555
Q ss_pred cccccccCccchhhhhccCCCCccccccccccccccc
Q 013992 389 YSSAATADRWDCMKCLKASSPDCGFCASHSNKVKGIS 425 (432)
Q Consensus 389 ~~~~~~~~~~~~~~~~r~~~~~~g~~~~~~~~~~g~~ 425 (432)
.....+|.+|. ++|++ ..|++.+.....+.++
T Consensus 427 tfivpaE~FPa---rvR~t--~hGIsAA~GK~GAivg 458 (538)
T KOG0252|consen 427 TFIVPAEIFPA---RVRST--CHGISAASGKAGAIVG 458 (538)
T ss_pred eEEeehhhchH---HHhhh--hhhHHHHhccchHHHH
Confidence 55566677666 99999 9999988877655444
No 68
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.95 E-value=2.8e-26 Score=216.84 Aligned_cols=282 Identities=18% Similarity=0.136 Sum_probs=205.6
Q ss_pred HHHHhhcccceeccccchhhhhhhhccccchhhh--HHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHH
Q 013992 35 SAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKT--LLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVG 112 (432)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 112 (432)
.++++.++.........+.+|.+.+++|.+..+. .+.+++.+++.++..+++++.|+++||+|||++++.+.++.+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 97 (408)
T PRK09874 18 VAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIV 97 (408)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHH
Confidence 3344556667777778889999999999876553 34488999999999999999999999999999999999999999
Q ss_pred HHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHH
Q 013992 113 AVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWML 192 (432)
Q Consensus 113 ~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f 192 (432)
.+++.++++++.+++.|++.|++.+ ..+....++.|++|+++|+++.++......+|..+++.+++.+.+..+ ||+.|
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~ 175 (408)
T PRK09874 98 MVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYG-LRPVF 175 (408)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-HHHHH
Confidence 9999999999999999999999865 567777889999999999999999999999999999999999988776 99999
Q ss_pred HhhHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhccc
Q 013992 193 GVAGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTR 271 (432)
Q Consensus 193 ~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (432)
++.++..++..+. +++.||+++.. ++.+ +.+..+..+.++++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----------------------------------~~~~~~~~~~~~~~ 218 (408)
T PRK09874 176 FITASVLFLCFLVTLFCIRENFQPV---SKKE----------------------------------MLHMREVVTSLKNP 218 (408)
T ss_pred HHHHHHHHHHHHHHHHHhccCcccc---cchh----------------------------------hhHHHHHHHhCcCC
Confidence 9988877666555 45566653200 0000 00001123455666
Q ss_pred chhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchh---HHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhH
Q 013992 272 TVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNR---TALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVIS 348 (432)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~ 348 (432)
+++.......... .........+.+.|..+..+.... ..+.......++.+++.+..|++.||++||+.+..+
T Consensus 219 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~ 294 (408)
T PRK09874 219 KLVLSLFVTTLII----QVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITA 294 (408)
T ss_pred chHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHH
Confidence 6544332211111 112334445567776665443222 234455556677788889999999999999998887
Q ss_pred HHHHHHHHHHH
Q 013992 349 LSGVILSLGVL 359 (432)
Q Consensus 349 ~~~~~~~~~~~ 359 (432)
.....++.+.+
T Consensus 295 ~~~~~~~~~~~ 305 (408)
T PRK09874 295 LIFSVLLLIPM 305 (408)
T ss_pred HHHHHHHHHHH
Confidence 77665554443
No 69
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.95 E-value=5.2e-28 Score=229.00 Aligned_cols=329 Identities=15% Similarity=0.104 Sum_probs=230.2
Q ss_pred cccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHH--
Q 013992 41 LLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAA-- 118 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-- 118 (432)
++..+......+.+|.+.++++.+..+. +++.+.+.+++.+++++.|+++||+|||+++..+..+.+++.+..+.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~---g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~ 103 (417)
T PRK10489 27 FISIFGLGLLGVAVPVQIQMMTGSTLQV---GLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNA 103 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHH---HHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHH
Confidence 3344455567778898888888877777 99999999999999999999999999999999888887777665442
Q ss_pred ---hCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhh
Q 013992 119 ---APNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVA 195 (432)
Q Consensus 119 ---~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~ 195 (432)
.++++.+++.|+++|++.+...+...+++.|+.|+++|+++.++......+|..+|+.+++.+.+..+ |++.|++.
T Consensus 104 ~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~-~~~~~~~~ 182 (417)
T PRK10489 104 FLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGG-VAWNYGLA 182 (417)
T ss_pred HcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHh-hHHHHHHH
Confidence 56788999999999999888888888999999999999999999999999999999999999887766 99999988
Q ss_pred HHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhH
Q 013992 196 GIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRR 275 (432)
Q Consensus 196 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (432)
++..++..+..+.+||+++.. .+.++ ..++.....+..+++|.++.
T Consensus 183 ~~~~~~~~~~~~~l~~~~~~~---~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~~ 228 (417)
T PRK10489 183 AAGTFITLLPLLRLPALPPPP---QPREH-------------------------------PLRSLLAGFRFLLASPVVGG 228 (417)
T ss_pred HHHHHHHHHHHHhCCCCCCCC---ccccc-------------------------------chHHHHHHHHHHHcChHHHH
Confidence 877777666667777754210 00000 00000112345567776655
Q ss_pred HHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHH
Q 013992 276 GLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILS 355 (432)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 355 (432)
..+..++.. .......+.|.|.++..+.++...+.......++.+++.++.+++.||.++++.+..+..+..++
T Consensus 229 ~~~~~~~~~------~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~ 302 (417)
T PRK10489 229 IALLGGLLT------MASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLA 302 (417)
T ss_pred HHHHHHHHH------HHHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHH
Confidence 433322211 12345567888988866666778888888888999999999999999977777777776666655
Q ss_pred HHHHHHHHhccCCCCCccchhcccccccccccccccccccCccchhhhhccCCCCccccccccccc
Q 013992 356 LGVLSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCASHSNKV 421 (432)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~~~~~~ 421 (432)
..++... .+.+...+..+..+.+.....+..... .....|++.|++ +.|+.+...+..
T Consensus 303 ~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~p~~~~g~--~~g~~~~~~~~g 360 (417)
T PRK10489 303 VGLFGLM---PMWILAVLCLALFGYLSAISSLLQYTL---LQTQTPDEMLGR--INGLWTAQNVTG 360 (417)
T ss_pred HHHHHcc---chHHHHHHHHHHHHHHHHHHHHHHHHH---HHhhCCHHHHHH--HHHHHHHHHhhh
Confidence 5443322 111111222222222222222111222 233455699999 898886655443
No 70
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.95 E-value=1.7e-26 Score=213.76 Aligned_cols=309 Identities=26% Similarity=0.329 Sum_probs=244.7
Q ss_pred HHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHH
Q 013992 36 AGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVI 115 (432)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 115 (432)
+++..+....+....++..|.+.+++|.+..+. +++.+.+.++..+++++.|+++||+|||+.+..+.++..++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~ 80 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLLAEDLGLSASQA---GLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLL 80 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHH---HHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHH
Confidence 344556677778888899999999999888888 99999999999999999999999999999999999999999999
Q ss_pred HHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhh
Q 013992 116 MAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVA 195 (432)
Q Consensus 116 ~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~ 195 (432)
..+.++++.+.+.|++.|++.+...+...+++.|++|+|+|++.+++......+|..+++.+++.+.+..+ ||+.+++.
T Consensus 81 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~ 159 (352)
T cd06174 81 LAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLG-WRWLFLIL 159 (352)
T ss_pred HHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988776 99999998
Q ss_pred HHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhH
Q 013992 196 GIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRR 275 (432)
Q Consensus 196 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (432)
++..++..+...+++ |+++.
T Consensus 160 ~~~~~~~~~~~~~~~------------------------------------------------------------~~~~~ 179 (352)
T cd06174 160 AILGLLLALLLLFLL------------------------------------------------------------RLLLL 179 (352)
T ss_pred HHHHHHHHHHHHHHH------------------------------------------------------------HHHHH
Confidence 887776666544431 22222
Q ss_pred HHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCch-hhHhHHHHHHH
Q 013992 276 GLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKK-LLVISLSGVIL 354 (432)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~-~~~~~~~~~~~ 354 (432)
..+ ..+...........+.|.+.++..+.++.+.+.......++..++.++.+++.||++||+ .+..+..+..+
T Consensus 180 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i 254 (352)
T cd06174 180 LAL-----AFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAAL 254 (352)
T ss_pred HHH-----HHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 222 223333456777788888988875667888889999999999999999999999999999 88888887777
Q ss_pred HHHHHHHHHhccCCCCCccchhcccccccccccccccccccCccchhhhhccCCCCccccccccccc
Q 013992 355 SLGVLSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCASHSNKV 421 (432)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~~~~~~ 421 (432)
+...+..... .+.........+.+.....+.......+. .|++.|++ ..|+.+...+..
T Consensus 255 ~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~ 313 (352)
T cd06174 255 GLLLLALAPS---LALLLVALLLLGFGLGFAFPALLTLASEL---APPEARGT--ASGLFNTFGSLG 313 (352)
T ss_pred HHHHHHHhcc---HHHHHHHHHHHHHHHhccchhHHHHHHhh---cCHHHHHH--HHHHHHHHHHHH
Confidence 7766655321 22233333334444333333334333444 44489998 888776665543
No 71
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.94 E-value=3.8e-25 Score=204.91 Aligned_cols=265 Identities=18% Similarity=0.257 Sum_probs=201.8
Q ss_pred ccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHH
Q 013992 47 TGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALI 126 (432)
Q Consensus 47 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~ 126 (432)
....++.+|.+.+++|.+..+. +++.+.+.++..+++++.|+++||+|||+++..+.++..++.+.+ .+++.+.++
T Consensus 16 ~~~~~~~lp~l~~~~~~s~~~~---g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~ 91 (355)
T TIGR00896 16 LTSVGPLLPQIRSALGMSFSVA---GLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLF 91 (355)
T ss_pred cccCcccHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHH
Confidence 3567889999999999999988 999999999999999999999999999999999999988888877 788999999
Q ss_pred HHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCC-chHHHHHhhHHHHHHHHHH
Q 013992 127 TGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPG-TWRWMLGVAGIPALLQFIL 205 (432)
Q Consensus 127 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~-~wr~~f~~~~~~~~~~~~~ 205 (432)
+.|++.|++.+...+....++.|++| ++|++++++.+.+..+|..+++.+.+.+.+..+ +||+.|.+.++..++..
T Consensus 92 ~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~-- 168 (355)
T TIGR00896 92 AGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLAL-- 168 (355)
T ss_pred HHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH--
Confidence 99999999999888888888899986 579999999999999999999999888876543 39999887766544332
Q ss_pred HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHHHHHHHHHHH
Q 013992 206 MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRGLIAGVGLQV 285 (432)
Q Consensus 206 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (432)
..++||.++ +.+ ++++.++...++.+|+|.++...+...+
T Consensus 169 ~~~~~~~~~------~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 208 (355)
T TIGR00896 169 LAWIPQVRR------RVA-------------------------------ANQTTTRLTPVRIWRSPLAWQVTVFFGL--- 208 (355)
T ss_pred HHHhhhhcc------ccC-------------------------------CCCCCCCCCCchhhcCHhHHHHHHHHHH---
Confidence 233444311 000 0000111234567788777654333222
Q ss_pred HhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhC-CchhhHhHHHHHHHHHHHHHH
Q 013992 286 FQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTG-RKKLLVISLSGVILSLGVLSA 361 (432)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~-~~~~~~~~~~~~~~~~~~~~~ 361 (432)
....++....+.|.|+++. +.+..+.+.......++.++++++.|++.||++ ||+.+..+..+..++...+.+
T Consensus 209 --~~~~~~~~~~~lp~~~~~~-g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~ 282 (355)
T TIGR00896 209 --QSGLYYSLIGWLPAILISH-GASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLF 282 (355)
T ss_pred --HHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHH
Confidence 2224566677889999876 455777888888889999999999999999995 555666666666665554443
No 72
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.94 E-value=1.6e-25 Score=210.06 Aligned_cols=315 Identities=15% Similarity=0.079 Sum_probs=213.9
Q ss_pred ccccchhhh-hhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHH
Q 013992 47 TGVISGALL-YIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGAL 125 (432)
Q Consensus 47 ~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~ 125 (432)
.....+.++ ++.+++|.+..+. |++.+...++..+..++.|+++||+|||++++.+.++..++.+++.++++++.+
T Consensus 26 ~~~~~~~~~~~~~~~~g~s~~~~---gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l 102 (400)
T PRK11646 26 FFVVFPLISIRFVDQLGWAAVMV---GIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLL 102 (400)
T ss_pred HHHHHHHHHHHHHHHhCCcHHHH---HHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 333444444 4678899988888 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHH
Q 013992 126 ITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFIL 205 (432)
Q Consensus 126 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 205 (432)
++.|+++|++.+...+...+++.|++|+++|++++++......+|..+||.+++++. ..+ ||+.|++.++..++..++
T Consensus 103 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g-~~~~f~~~~~~~~~~~i~ 180 (400)
T PRK11646 103 WLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYD-FRLVCATGAVLFVLAAAF 180 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh-HHHHHHHHHHHHHHHHHH
Confidence 999999999998888988999999999999999999999999999999999999998 444 999999988776665544
Q ss_pred -HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHHHHHHHHHH
Q 013992 206 -MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRGLIAGVGLQ 284 (432)
Q Consensus 206 -~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (432)
.++.||.++ ++. +++.+...++.+++++++...+......
T Consensus 181 ~~~~~~~~~~-----~~~----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (400)
T PRK11646 181 NAWLLPAYKL-----STV----------------------------------RTPVREGMTRVLRDKRFVTYVLTLTGYY 221 (400)
T ss_pred HHHhCCcccc-----ccc----------------------------------chhhHHHHHHHHcCchHHHHHHHHHHHH
Confidence 444554310 000 0001123456778887765333322211
Q ss_pred HHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHh-hhCCchhhHhHHHHHHHHHHHHHHHH
Q 013992 285 VFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFID-RTGRKKLLVISLSGVILSLGVLSAVF 363 (432)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (432)
. .......+.|.|.++.++. +.+.+.......+....+....+++.| |++.++.+..+..+..++..++....
T Consensus 222 ~-----~~~~~~~~~p~~~~~~~~~-~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~ 295 (400)
T PRK11646 222 M-----LAVQVMLMLPIMVNDIAGS-PSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS 295 (400)
T ss_pred H-----HHHHHHHhhhhhHHhhcCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh
Confidence 1 2223445788988887765 456666666666655555555555555 45656666666666665554443321
Q ss_pred hccCCCCCccchhcccccccccccccccccccCccchhhhhccCCCCccccccccc
Q 013992 364 HETTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCASHSN 419 (432)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~~~~ 419 (432)
..+.........+.......+..... .....|++.|++ ..|+.+...+
T Consensus 296 ---~~~~~~~~~~l~~~g~~~~~p~~~~~---~~~~~p~~~~g~--~~g~~~~~~~ 343 (400)
T PRK11646 296 ---NLQQLFTLICLFYIGSIIAEPARETL---SASLADARARGS--YMGFSRLGLA 343 (400)
T ss_pred ---hHHHHHHHHHHHHHHHHHHHccHHHH---HHhcCCcccchh--hhhHHHHHHH
Confidence 12212111122222222222222222 223445589999 8887655443
No 73
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.94 E-value=6.5e-25 Score=207.99 Aligned_cols=376 Identities=18% Similarity=0.153 Sum_probs=234.7
Q ss_pred HHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHH
Q 013992 32 LAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFV 111 (432)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~ 111 (432)
.+..+++.....++.....+.+++++..|+|-++. . .|+.+.+.++.+++.++.|+++|.||||++++.+.++..+
T Consensus 45 ~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~~~-~---~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vv 120 (599)
T PF06609_consen 45 SFAAFSLAVIAAYFVLVLPASILPYINADIGGSDN-W---SWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVV 120 (599)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCCcc-c---hHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHh
Confidence 33344554444555666667788999999987643 3 6788889999999999999999999999999999999999
Q ss_pred HHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHH
Q 013992 112 GAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWM 191 (432)
Q Consensus 112 ~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~ 191 (432)
|+++++.++|...++++..+.|+|.|.... ....++|..|.|.|....++..........+++.++..+....+ |||.
T Consensus 121 G~Iv~atA~~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~-WRw~ 198 (599)
T PF06609_consen 121 GSIVCATAQNMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSG-WRWI 198 (599)
T ss_pred HHHHhhcCCcHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCC-cchH
Confidence 999999999999999999999999876654 45668999999999888887776666666677888877665554 9999
Q ss_pred HHhhHHHHHHHHHHHhhcCCCHHHHHHcCC---HHHHHHHHHHh------------------CC----CCch----HHHH
Q 013992 192 LGVAGIPALLQFILMLLLPESPRWLYRKGR---EEEAQAILRKV------------------YP----AHEV----ETEI 242 (432)
Q Consensus 192 f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~---~~~~~~~~~~~------------------~~----~~~~----~~~~ 242 (432)
|++.++...+.+++.+++..+|++...+++ ..+..+.++.+ .. ..+. ....
T Consensus 199 ~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lv 278 (599)
T PF06609_consen 199 FYIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLV 278 (599)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHH
Confidence 999988777766653333333333222221 11111111110 00 0011 1111
Q ss_pred HHHHHHhHHHHHHc--cCccchhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCch---hHHHHH
Q 013992 243 RDLKESVDKEIEEE--GSSEKINLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASN---RTALLL 317 (432)
Q Consensus 243 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 317 (432)
..........-.|. +.+++.-+.+++|+++.....+ +..+.....++....+.|.........+. ...+..
T Consensus 279 iG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~~~~~l----vi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~ 354 (599)
T PF06609_consen 279 IGFVLLVAFVVWEWFGAPKDPLFPHRLFKDRRGFAALL----VISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWI 354 (599)
T ss_pred HHHHHHHHHHHhhhhccCCCCcCCHHHhccchHHHHHH----HHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehh
Confidence 11111111111222 2245667788998854322211 12222222355665666777666554443 246777
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCc-hhhHhHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccccccccccccC
Q 013992 318 SLVTSGLNAAGSIVSIYFIDRTGRK-KLLVISLSGVILSLGVLSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAATAD 396 (432)
Q Consensus 318 ~~~~~~~~~~~~~~~g~l~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (432)
..+...+...+.++.|.+..+++|- +.++++..++.+++.++.....+.... .+...++.+++.+..........+.
T Consensus 355 s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~-~i~~~~l~g~giG~~~~~~~~~~ql- 432 (599)
T PF06609_consen 355 SSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNA-AIAFLVLAGFGIGGILVPAIVIAQL- 432 (599)
T ss_pred hhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcch-HHHHHHHHHHhHHHHHHHHHHeeEe-
Confidence 8888888899999999999988874 445566666666556555554333322 2222333333322211111111111
Q ss_pred ccchhhhhccCCCCccccccccccccc
Q 013992 397 RWDCMKCLKASSPDCGFCASHSNKVKG 423 (432)
Q Consensus 397 ~~~~~~~~r~~~~~~g~~~~~~~~~~g 423 (432)
.+|++.-++ ++|+..+.+....+
T Consensus 433 --~~p~~~ig~--a~gL~~s~R~~GGs 455 (599)
T PF06609_consen 433 --IVPDEDIGT--ATGLTGSIRSIGGS 455 (599)
T ss_pred --eeCchHHHH--HHHHHHHHHHHhhH
Confidence 566688888 77777666555433
No 74
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.94 E-value=1.5e-25 Score=207.76 Aligned_cols=325 Identities=10% Similarity=0.029 Sum_probs=214.8
Q ss_pred ccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccc-----cchHH-HHHHHHHHHHHHHHHHHh-
Q 013992 47 TGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRF-----GRRTS-ILVADFLFFVGAVIMAAA- 119 (432)
Q Consensus 47 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~-----Grr~~-l~~~~~~~~~~~~~~~~~- 119 (432)
....++..|.+.+|+|.+..+. ++.... .+...+ .+++|+++||+ ||||. ++.+.++.++.....++.
T Consensus 4 ~~~~~~~~~~~~~~~g~s~~~~---g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~ 78 (356)
T TIGR00901 4 LGLVGNTLPYWLRSKNVSLKTI---GFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLV 78 (356)
T ss_pred chhHHhHHHHHHHHcCCCHHHH---HHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCC
Confidence 3456788899999999999888 777655 444454 89999999998 89997 466777777777777776
Q ss_pred --CChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCC-------chHH
Q 013992 120 --PNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPG-------TWRW 190 (432)
Q Consensus 120 --~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~-------~wr~ 190 (432)
.+.+.+....++.+++.+...+...+++.|++|+|+|+++.++...+..+|.++++.+++.+.+..+ +||.
T Consensus 79 ~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~ 158 (356)
T TIGR00901 79 PSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGY 158 (356)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHH
Confidence 4555677777788888888889999999999999999999999999999999999999988876654 2999
Q ss_pred HHHhhHHHHHHHHHHHhh-cCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhc
Q 013992 191 MLGVAGIPALLQFILMLL-LPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLK 269 (432)
Q Consensus 191 ~f~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (432)
.|++.++..++..+..++ .||+++. +.+.++ + .+ +.+...+++++
T Consensus 159 ~f~i~ai~~l~~~~~~~~~~~e~~~~---~~~~~~--------------------------~-~~----~~~~~~~~~~~ 204 (356)
T TIGR00901 159 IFFWTALLILPGLLVTLFLAKEPQED---ASVPKP--------------------------L-TQ----AVLKPIREFFQ 204 (356)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCcc---cccchh--------------------------H-HH----HHHHHHHHHHH
Confidence 999998877776655443 5664210 000000 0 00 01123445666
Q ss_pred ccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHH-HHHHHHHHHHHHHHhhhCCchhhHhH
Q 013992 270 TRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTS-GLNAAGSIVSIYFIDRTGRKKLLVIS 348 (432)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~~~~~~~~~~ 348 (432)
++..+......+ ..+.....+.....+.|.|+++. +.+..+.+......+ +..+++.++++++.||+|+|+.+..+
T Consensus 205 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~ 281 (356)
T TIGR00901 205 RKNMIQALLLLL--LIVLYKLGDSAATVLTTLFLLDM-GFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLF 281 (356)
T ss_pred hcCchHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 665222111111 11222235566777888898884 445666665555444 56789999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHhcc--------CCCCCccchhcccccccccccccccccccCccchhhhhccCCCCcccccccc
Q 013992 349 LSGVILSLGVLSAVFHET--------TSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCASHS 418 (432)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~~~ 418 (432)
..+..+...++.+..... ..+......++.++......+.......+.. |++.|++ ..|+.++..
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---p~~~~g~--~~g~~~~~~ 354 (356)
T TIGR00901 282 GIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLS---NPKFGAT--QMALLSSLS 354 (356)
T ss_pred HHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhc---CCCccHH--HHHHHHHHH
Confidence 777766655444432111 1111111222223333333333443434444 4599999 888765543
No 75
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.93 E-value=4.1e-25 Score=212.05 Aligned_cols=286 Identities=16% Similarity=0.064 Sum_probs=203.2
Q ss_pred CCCChhHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccc-----c
Q 013992 23 SWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRF-----G 97 (432)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~-----G 97 (432)
+|.+++|...++ +..+.++......+..+|...++.|.+.++. +.. +.....+ ++.+++|+++||+ |
T Consensus 7 ~~~~~~~~~~~~---~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~i---g~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~G 78 (491)
T PRK11010 7 RIFQQPNSAILL---ILGFASGLPLALTSGTLQAWMTVENIDLKTI---GFF-SLVGQAY-VFKFLWSPLMDRYTPPFLG 78 (491)
T ss_pred HHHcccHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHH---HHH-HHHHHHH-HHHHHHHHHHHcccccCCC
Confidence 344444444433 3445666777778888999988888887777 664 3333333 6889999999999 9
Q ss_pred chHH-HHHHHHHHHHHHHHHHHh---CChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHH
Q 013992 98 RRTS-ILVADFLFFVGAVIMAAA---PNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFL 173 (432)
Q Consensus 98 rr~~-l~~~~~~~~~~~~~~~~~---~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i 173 (432)
||+. ++.+.+..+++....++. ++++.+.+.+++.|++.+...+...++..|++|+++|+++.++...+..+|.++
T Consensus 79 rrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~ll 158 (491)
T PRK11010 79 RRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLV 158 (491)
T ss_pred CchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHH
Confidence 9986 667777777777777775 467888899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccC-CCCchHHHHHhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHH
Q 013992 174 SYLINLAFTR-APGTWRWMLGVAGIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKE 252 (432)
Q Consensus 174 ~~~i~~~l~~-~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (432)
++.+..++.+ ..+ ||..|++.++..++..+..++.||+++. ++++++
T Consensus 159 g~~l~~~l~~~~~G-Wr~~f~i~a~l~ll~~l~~~~~~e~~~~---~~~~~~---------------------------- 206 (491)
T PRK11010 159 SGGLALWLADRYLG-WQGMYWLMAALLIPCIIATLLAPEPTDT---IPVPKT---------------------------- 206 (491)
T ss_pred HHHHHHHHHhcccC-HHHHHHHHHHHHHHHHHHHHhcCCCccc---cccccc----------------------------
Confidence 9999999988 455 9999999988777776666667876421 000000
Q ss_pred HHHccCccchhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHH-HHHHHHHHHHHHH
Q 013992 253 IEEEGSSEKINLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLS-LVTSGLNAAGSIV 331 (432)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 331 (432)
. ++....+.++.+++++.+......+.... .......+.+.|+.+..+.+..+.+... ....++.+++.++
T Consensus 207 -~--~~~~~~~l~~~~~~~~~~~~ll~~~l~~~-----~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll 278 (491)
T PRK11010 207 -L--EQAVVAPLRDFFGRNNAWLILLLIVLYKL-----GDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALY 278 (491)
T ss_pred -h--hhhHHHHHHHHHcCcCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00011234566777766554333222211 2334445566676554555677777776 4556789999999
Q ss_pred HHHHHhhhCCchhhHhHHHHHHHHH
Q 013992 332 SIYFIDRTGRKKLLVISLSGVILSL 356 (432)
Q Consensus 332 ~g~l~d~~~~~~~~~~~~~~~~~~~ 356 (432)
+|+++||+++|+.+.++..+..+..
T Consensus 279 ~G~L~dr~g~~~~l~i~~~l~~l~~ 303 (491)
T PRK11010 279 GGILMQRLSLFRALMIFGILQGVSN 303 (491)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 9999999999887776655544443
No 76
>PRK10054 putative transporter; Provisional
Probab=99.93 E-value=2.5e-25 Score=208.44 Aligned_cols=275 Identities=10% Similarity=0.076 Sum_probs=202.1
Q ss_pred hhcccceeccccchhhh-hhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHH
Q 013992 39 GGLLFGYDTGVISGALL-YIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMA 117 (432)
Q Consensus 39 ~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 117 (432)
..++.........+.+| ++.+++|.+..+. +++.+.+.++..+++++.|+++||+|||++++.+.++.+++.++.+
T Consensus 15 ~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~---g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~ 91 (395)
T PRK10054 15 SSLLLTIGRGATLPFMTIYLSRQYSLSVDLI---GYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIP 91 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHH
Confidence 33444555555566555 4667899999888 9999999999999999999999999999999999999999999999
Q ss_pred HhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHH
Q 013992 118 AAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGI 197 (432)
Q Consensus 118 ~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~ 197 (432)
++++++.+++.|++.|.+.+...+....+..|..|+++|++++++.....++|..++|.+++++.+ .+ ||..|++.++
T Consensus 92 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g-~~~~f~~~~~ 169 (395)
T PRK10054 92 LVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QS-INLPFWLAAI 169 (395)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc-cCcHHHHHHH
Confidence 999999999999999888777788888999999999999999999999999999999999999875 34 9999998887
Q ss_pred HHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHH
Q 013992 198 PALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRG 276 (432)
Q Consensus 198 ~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (432)
..++..+. .+++||+++ +++.+ + ++..+.++.+|+|+++..
T Consensus 170 ~~~i~~i~~~~~~~~~~~----~~~~~------------------------------~----~~~~~~~~~~~~~~~~~~ 211 (395)
T PRK10054 170 CSAFPLVFIQIWVQRSEK----AIATE------------------------------T----GSVWSPSVLLQDKALLWF 211 (395)
T ss_pred HHHHHHHHHHHHHhcccc----ccccc------------------------------h----hhhhhhhhhccCceehHH
Confidence 77666544 444565421 00000 0 000122567888888765
Q ss_pred HHHHHHHHHHhhhcchHHHHHhHHHHHHHc--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHH
Q 013992 277 LIAGVGLQVFQQFVGINTVMYYSPTIVQLS--GFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVIL 354 (432)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 354 (432)
.+..++... .......+.+.|.... ...+....+.......+.........|++.||.++|+.+..+..+..+
T Consensus 212 ~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~ 286 (395)
T PRK10054 212 TCSGFLASF-----VSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVI 286 (395)
T ss_pred HHHHHHHHH-----HHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHH
Confidence 554433332 2222333445554332 223344556666666666677778889999999999988888766666
Q ss_pred HHHHHHH
Q 013992 355 SLGVLSA 361 (432)
Q Consensus 355 ~~~~~~~ 361 (432)
+...+..
T Consensus 287 ~~~~~~~ 293 (395)
T PRK10054 287 GLVGFIF 293 (395)
T ss_pred HHHHHHH
Confidence 6655443
No 77
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.93 E-value=5.2e-24 Score=193.97 Aligned_cols=294 Identities=14% Similarity=0.057 Sum_probs=198.2
Q ss_pred hHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhh-hHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHH
Q 013992 28 YVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRK-TLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVAD 106 (432)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~ 106 (432)
+++..++++.++.+-.. +...+...|++.+|+|+++.+ . |.+.+.++.++++..++.|+++||+|.|+++..+.
T Consensus 25 W~~~~~~lC~fGF~~e~--R~n~s~a~p~L~~elglT~~qv~---G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~ 99 (511)
T TIGR00806 25 WRVLVLYLCFYGFMAQF--RPGESFITPYLLTVLNFTEETVT---NEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQA 99 (511)
T ss_pred hhHHHHHHHHHHHHHHh--hchHHHHHHHHHHHcCCCHHHhc---chHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH
Confidence 33333334444444333 667888999999999999998 7 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 013992 107 FLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPG 186 (432)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~ 186 (432)
+.+++.+++.++++++..+.+.|++.|++.|... ....++..|+|+++|+++.++...+..+|.++++++++++. ..+
T Consensus 100 l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s~g 177 (511)
T TIGR00806 100 LSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-TLG 177 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcC
Confidence 9999999999999999999999999999999999 99999999999999999999999999999999999999954 445
Q ss_pred chHHHHHhh---HHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHH---HHHHhCCCCchHHHHHHHHHHhHHHHHHccCcc
Q 013992 187 TWRWMLGVA---GIPALLQFILMLLLPESPRWLYRKGREEEAQA---ILRKVYPAHEVETEIRDLKESVDKEIEEEGSSE 260 (432)
Q Consensus 187 ~wr~~f~~~---~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (432)
||+.+... .....+++++.+++|..+|.+.-+++.+.... ..+...+... .+..+..+ ......-+.-
T Consensus 178 -Wr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~l 251 (511)
T TIGR00806 178 -WISYSTLNIISLVFMTFSVFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPG-GKLEDYLG----TCRDSFLVRM 251 (511)
T ss_pred -chhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhhccccccccccccccccCCCCCc-cccchhhh----hhhhHHHHHH
Confidence 98865443 33344455567888866654333322111000 0000000000 00000000 0000000112
Q ss_pred chhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 013992 261 KINLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRT 339 (432)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 339 (432)
..+.++..+++.+.+-.++..+. .++++.+..|.-..-+....+.+..-|..-....+.+.+..+..|++-.++
T Consensus 252 ~~~~~~~y~n~~vl~WSlWwa~a-----~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w 325 (511)
T TIGR00806 252 LSELVTIYRNPQLLLWSLWWVFN-----SAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRW 325 (511)
T ss_pred HHHHHHHhcCcchhhhhHHHHHH-----hhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 34556677788776644444333 335565555554444433332222344555556666788888889885554
No 78
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.92 E-value=1.3e-24 Score=203.18 Aligned_cols=275 Identities=13% Similarity=0.018 Sum_probs=204.3
Q ss_pred HhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHH----HHHHHHHHHHH
Q 013992 38 IGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSI----LVADFLFFVGA 113 (432)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l----~~~~~~~~~~~ 113 (432)
+.++..+.......|.+|.+.+++|.+..+. +++.+++.+...++++++|+++||+|||+.. ..+..+..+
T Consensus 11 ~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~i---g~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~-- 85 (382)
T TIGR00902 11 LGFFGYFCAYGIFLPFFPAWLKGIGLGEEMI---GLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA-- 85 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--
Confidence 4445555666778899999999999999888 9999999999999999999999999985433 222222222
Q ss_pred HHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHH
Q 013992 114 VIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLG 193 (432)
Q Consensus 114 ~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~ 193 (432)
..+..+++++.+++.|.++|.+.+...|...++..|+ +++|++..+......++|.+++|++++.+.+..+ ||..|+
T Consensus 86 ~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g-~~~~f~ 162 (382)
T TIGR00902 86 AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFD-EQNILA 162 (382)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcC-hhHHHH
Confidence 2445678999999999999999888888888887665 4678999999999999999999999999999887 999998
Q ss_pred hhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccch
Q 013992 194 VAGIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTV 273 (432)
Q Consensus 194 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (432)
+.+...++.. ..+.++|+++ +++.++ ++++++..+.++.+|+|++
T Consensus 163 ~~~~~~~~~~-~~~~~~~~~~----~~~~~~------------------------------~~~~~~~~~~~~~l~~~~~ 207 (382)
T TIGR00902 163 ILTAGLAFML-IGFLIKPTIP----PKDAIP------------------------------EDESQGDSAFIALLKNPMN 207 (382)
T ss_pred HHHHHHHHHH-HHHHcCCCCC----CCcccc------------------------------ccccccchhHHHHHcChHH
Confidence 8765533333 3333444321 000000 0001112345788999988
Q ss_pred hHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHH
Q 013992 274 RRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVI 353 (432)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 353 (432)
+...+..++... .......+.|.|+++.+ .++...+.......++.+++....+++.||+++|+.+.++.....
T Consensus 208 ~~~l~~~~l~~~-----~~~~~~~~~~~~l~~~g-~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~ 281 (382)
T TIGR00902 208 LRFLAAVCLIQG-----AHAAYYGFSAIYWQAAG-ISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACV 281 (382)
T ss_pred HHHHHHHHHHHH-----HHHHHHHHHHHHHHHCC-CCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHH
Confidence 775554433322 55666678889998854 456777888888899999999999999999999999998888888
Q ss_pred HHHHHHHH
Q 013992 354 LSLGVLSA 361 (432)
Q Consensus 354 ~~~~~~~~ 361 (432)
+....+..
T Consensus 282 ~~~~~~~~ 289 (382)
T TIGR00902 282 GRWAIIGA 289 (382)
T ss_pred HHHHHHHh
Confidence 87766654
No 79
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.92 E-value=1.3e-24 Score=230.52 Aligned_cols=342 Identities=10% Similarity=-0.027 Sum_probs=222.6
Q ss_pred HHHHHhhcccceeccccchhhh-hhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHH---HHHHH
Q 013992 34 FSAGIGGLLFGYDTGVISGALL-YIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILV---ADFLF 109 (432)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~---~~~~~ 109 (432)
...++..+.+++....+..... .+..+.+.+ ...+.++..+++.+.+.+.++++|+++||+|||+++.. ..++.
T Consensus 18 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~ 95 (1140)
T PRK06814 18 WTQFFGAFNDNFLKNALVILILYGLSGALGAY--NNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGI 95 (1140)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHhccccccc--hHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHH
Confidence 3344444544444443333322 333333332 22334888899999999999999999999999997533 22333
Q ss_pred HHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchH
Q 013992 110 FVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWR 189 (432)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr 189 (432)
.+..+.+...+|++.++++|+++|++.+...|...+++.|++|+++|++++++.+++..+|.++||.+++++.+..+ |+
T Consensus 96 ~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~-~~ 174 (1140)
T PRK06814 96 AALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGN-FV 174 (1140)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccc-cH
Confidence 33333344458999999999999999999999999999999999999999999999999999999999999998877 99
Q ss_pred HHHHhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhc
Q 013992 190 WMLGVAGIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLK 269 (432)
Q Consensus 190 ~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (432)
+.|+..++..++..++.+++|++++. .++...+. . .. ++....++.+.+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----------------~-~~-----------~~~~~~~~~~~~ 223 (1140)
T PRK06814 175 ILVALLMGIAVLGWLASLFIPKTGNA--APDLKIDR-----------------N-II-----------RSTITLLKYAKA 223 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCCCC--CCCCeecc-----------------c-hH-----------HHHHHHHHHHhc
Confidence 99966666666666666777765320 00000000 0 00 000124566777
Q ss_pred ccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHH
Q 013992 270 TRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISL 349 (432)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~ 349 (432)
++.++...+......+ .......+.|.|+++..+.++...+.+.....++.+++.++.|++.|+..+++.+..+.
T Consensus 224 ~~~~~~~~~~~~~~~~-----~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~ 298 (1140)
T PRK06814 224 DKRIWLAILGISWFWL-----VGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGA 298 (1140)
T ss_pred CchHHHHHHHHHHHHH-----HHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHH
Confidence 8877765554333332 34556668899998877777888899999999999999999999998877766655555
Q ss_pred HHHHHHHHHHHHHH-----------------hccCCCCCccchhcccccccccccccccccccCccchhhhhccCCCCcc
Q 013992 350 SGVILSLGVLSAVF-----------------HETTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCG 412 (432)
Q Consensus 350 ~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g 412 (432)
++..++.+.+.+.. ...+.+...+..++.+++.........+. .....|++.|++ ..|
T Consensus 299 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~p~~~~G~--v~g 373 (1140)
T PRK06814 299 LLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAA---LQAWANPAHRAR--VIA 373 (1140)
T ss_pred HHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHH---HHhhCCccccee--eeH
Confidence 55444443333310 00122222222233333333333223323 333555599999 888
Q ss_pred ccccccc
Q 013992 413 FCASHSN 419 (432)
Q Consensus 413 ~~~~~~~ 419 (432)
+.+....
T Consensus 374 ~~~~~~~ 380 (1140)
T PRK06814 374 ANNVLNA 380 (1140)
T ss_pred HHHHHHH
Confidence 7765543
No 80
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.92 E-value=1.8e-24 Score=230.08 Aligned_cols=329 Identities=11% Similarity=-0.040 Sum_probs=220.5
Q ss_pred cccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHH---HHHhCChhH
Q 013992 48 GVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVI---MAAAPNPGA 124 (432)
Q Consensus 48 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~---~~~~~~~~~ 124 (432)
.....+.+.+..+++.+... .+.+++.+++.+++.++++++|+++||+|||++++.+.++..++.++ +...++++.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (1146)
T PRK08633 27 GHKILIQNTLIKAYDGSEQV-ILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWL 105 (1146)
T ss_pred HHHHHHHHHHHHHcCcccHH-HHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHH
Confidence 33445556666667665433 34489999999999999999999999999999999988766655554 344578999
Q ss_pred HHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCC--------CCchHHHHHhhH
Q 013992 125 LITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRA--------PGTWRWMLGVAG 196 (432)
Q Consensus 125 ~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~--------~~~wr~~f~~~~ 196 (432)
++++|+++|++.+...+...+++.|++|+++|++++++...+..+|.++|+.+++++.+. .++|++.+.+.+
T Consensus 106 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 185 (1146)
T PRK08633 106 AFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVL 185 (1146)
T ss_pred HHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999998765 333555554444
Q ss_pred HHH-HHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhH
Q 013992 197 IPA-LLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRR 275 (432)
Q Consensus 197 ~~~-~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (432)
+.. ++..++.+.+||+|+....+.+.++ ....+......+.+++++.++.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~l~~~~~~~~ 236 (1146)
T PRK08633 186 LAVAVLGLIFAYRLPKVPAAAPEVFDKKK-----------------------------YLFPKLLWRNLKLLRSDRVLWL 236 (1146)
T ss_pred HHHHHHHHHHHhcCcCCCCCCcccccccc-----------------------------cccHHHHHHHHHHHhcCcHHHH
Confidence 333 3334445667776532110000000 0000001123456677777765
Q ss_pred HHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchh-HHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHH
Q 013992 276 GLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNR-TALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVIL 354 (432)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 354 (432)
..+...+... .......+.|.|+++..+.+.. ..+++.....++.+++.++.+++.||+++++.+.++.++..+
T Consensus 237 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~ 311 (1146)
T PRK08633 237 AIIGLSYFWF-----ISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLAL 311 (1146)
T ss_pred HHHHHHHHHH-----HHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHH
Confidence 4443332222 3345556778888776666666 788888888999999999999999999988888777776666
Q ss_pred HHHHHHHHHhccCCCCCccchhcccccccccccccccccccCccchhhhhccCCCCccccccccc
Q 013992 355 SLGVLSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCASHSN 419 (432)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~~~~ 419 (432)
+.+++.... +.+...+..++.+++.............+ ..|++.|++ +.|+.+...+
T Consensus 312 ~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~p~~~rg~--~~~~~~~~~~ 368 (1146)
T PRK08633 312 SLFLLPTAP---SLASVLVLFFLFGFSAGLFIVPLNALIQF---RAPEKELGK--VLAANNFLQN 368 (1146)
T ss_pred HHHHHHHhh---hHHHHHHHHHHHHHHHHHhhHHHHHHHhh---cCCccchhh--hhHHHHHHHH
Confidence 655554432 22222222333333333333222322233 345588999 8887665544
No 81
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.92 E-value=6e-24 Score=199.42 Aligned_cols=265 Identities=14% Similarity=0.105 Sum_probs=178.7
Q ss_pred hcccceeccccchhhhh-hhhccccchhhhHHHHHHHHHHHH-HHHHHHHhhhhhhccccchHHH-HHHHHHHHHHHHHH
Q 013992 40 GLLFGYDTGVISGALLY-IRDDFKSVDRKTLLQESIVSMAVA-GAIIGAAIGGWMNDRFGRRTSI-LVADFLFFVGAVIM 116 (432)
Q Consensus 40 ~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~s~~~~-~~~i~~~~~g~l~dr~Grr~~l-~~~~~~~~~~~~~~ 116 (432)
.++.........+.+|. +.+++|.+..+. |++.+...+ +..++.++.++ +||+||||.+ +.+.+...++..+.
T Consensus 24 ~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~---g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~ 99 (393)
T PRK15011 24 AFLTGIAGALQTPTLSIFLTDEVHARPAMV---GFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLF 99 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCHHHH---HHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHH
Confidence 44455555556666665 578899988888 998776555 55566655555 9999999875 45566666778888
Q ss_pred HHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccc--hhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHh
Q 013992 117 AAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIR--GALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGV 194 (432)
Q Consensus 117 ~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R--~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~ 194 (432)
+++++++.+++.+.+.|...+...|....+..|+.++++| +...++.+.+..+|.+++|++++++.+..+ ||..|+.
T Consensus 100 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~g-w~~~f~~ 178 (393)
T PRK15011 100 AWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFS-FTVMYLS 178 (393)
T ss_pred HHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcC-hHHHHHH
Confidence 8999999887666555544556778888888888877666 345578888999999999999999988777 9999999
Q ss_pred hHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhccc-c
Q 013992 195 AGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTR-T 272 (432)
Q Consensus 195 ~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 272 (432)
.++..++..+. ++++||.++. + +.++ ++ .... .+++ .
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~---~-~~~~-----------------------------~~-----~~~~---~~~~~~ 217 (393)
T PRK15011 179 AAVAFIVCGVMVWLFLPSMRKE---L-PLAT-----------------------------GT-----LEAP---RRNRRD 217 (393)
T ss_pred HHHHHHHHHHHHHhhcCccCCC---C-cccc-----------------------------cc-----cccc---cccccc
Confidence 88777666555 5567776420 0 0000 00 0000 0111 1
Q ss_pred hhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHH
Q 013992 273 VRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGV 352 (432)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 352 (432)
.+......... .........+.|.|+++..+.++.+.+.......++.+++.++.|+++||++||+.+..+....
T Consensus 218 ~~~~~~~~~~~-----~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~ 292 (393)
T PRK15011 218 TLLLFVICTLM-----WGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAG 292 (393)
T ss_pred HHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence 12211111111 1133445567888887766666777777777667778889999999999999998877665544
Q ss_pred HHH
Q 013992 353 ILS 355 (432)
Q Consensus 353 ~~~ 355 (432)
.+.
T Consensus 293 ~~~ 295 (393)
T PRK15011 293 VCF 295 (393)
T ss_pred HHH
Confidence 443
No 82
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.92 E-value=2.5e-23 Score=183.09 Aligned_cols=313 Identities=15% Similarity=0.148 Sum_probs=247.1
Q ss_pred HHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHH
Q 013992 32 LAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFV 111 (432)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~ 111 (432)
.+..+....++.++......+.+|.+.+.|+++..+. +++...++.++.+.+++.|++.+|+|+|+.++.|+.++.+
T Consensus 14 ~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a---~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~av 90 (422)
T COG0738 14 AFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEA---SLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAV 90 (422)
T ss_pred HHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHH---HHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHH
Confidence 3344445567788888889999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHH---HHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCC----
Q 013992 112 GAVIM---AAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRA---- 184 (432)
Q Consensus 112 ~~~~~---~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~---- 184 (432)
++.+. +...++..++++-++.|.|.+...+.+..+++...++++..+.+++.+..+.+|.+++|++++.+...
T Consensus 91 g~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~ 170 (422)
T COG0738 91 GAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVAL 170 (422)
T ss_pred HHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhh
Confidence 99988 46789999999999999999999999999999999998889999999999999999999999988773
Q ss_pred --------------CCchHHHHHhhHHHHHHHHHHHhhc--CCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHH
Q 013992 185 --------------PGTWRWMLGVAGIPALLQFILMLLL--PESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKES 248 (432)
Q Consensus 185 --------------~~~wr~~f~~~~~~~~~~~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (432)
..+||+.|...+...++..+..... ||.+.
T Consensus 171 ~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~---------------------------------- 216 (422)
T COG0738 171 TMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQV---------------------------------- 216 (422)
T ss_pred ccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCc----------------------------------
Confidence 1147888888887666666554443 43311
Q ss_pred hHHHHHHccCccchhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHH
Q 013992 249 VDKEIEEEGSSEKINLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAG 328 (432)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (432)
+..+..+++.....+++++|+++...+. .|++.........|++.|+.+..+.+.+++.........+.++|
T Consensus 217 ---~~~~~~~~~~~~~~~l~~~~~~~~gvl~-----~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vG 288 (422)
T COG0738 217 ---AAPSLGASGSAGLSSLFQNKHLRLGVLA-----IFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVG 288 (422)
T ss_pred ---ccccccccccchHHHHHhChHHHHHHHH-----HHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHH
Confidence 0011111111256889999998775543 34444467788889999999987778889999999999999999
Q ss_pred HHHHHHHHhhhCCchhhHhHHHHHHHHHHHHHHHHhccCCCCCccchhccccccccccccccccc
Q 013992 329 SIVSIYFIDRTGRKKLLVISLSGVILSLGVLSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAA 393 (432)
Q Consensus 329 ~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (432)
++++.++.+|+...|.+.+......+.++...+... ........+++.+..+..|...+..
T Consensus 289 RFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g----~v~~~~l~~ig~F~simfPTIfsla 349 (422)
T COG0738 289 RFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGG----VVALYALFLIGLFNSIMFPTIFSLA 349 (422)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcC----hHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 999999999999999888876666655555555432 3344456666777666666554433
No 83
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.91 E-value=1.1e-22 Score=190.06 Aligned_cols=267 Identities=14% Similarity=0.028 Sum_probs=196.0
Q ss_pred eeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccch----HHHHHHHHHHHHHHHHHHHhC
Q 013992 45 YDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRR----TSILVADFLFFVGAVIMAAAP 120 (432)
Q Consensus 45 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr----~~l~~~~~~~~~~~~~~~~~~ 120 (432)
.......|.+|.+.+|+|.+..+. |++.+++.++..++++++|+++||+||| +.+.+...+. .......++
T Consensus 18 ~~~g~~~p~l~~~l~~~g~s~~~i---G~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~ 92 (382)
T PRK11128 18 FAYGVFLPFWSVWLKGQGYTPETI---GLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAH 92 (382)
T ss_pred HHHHHHhhhHHHHHHhcCCCHHHH---HHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcc
Confidence 445667888898999999998888 9999999999999999999999999984 3333322222 223344568
Q ss_pred ChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHH
Q 013992 121 NPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPAL 200 (432)
Q Consensus 121 ~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~ 200 (432)
+++.+++.|++.|++.+...+...++..++ +++|+++.+......++|..+||.+++++.+..+ ||..|++.++..+
T Consensus 93 ~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g-~~~~f~~~~~~~~ 169 (382)
T PRK11128 93 SFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFG-EQAILWILTAGVA 169 (382)
T ss_pred cHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcC-hhHHHHHHHHHHH
Confidence 899999999999999888888888887776 4568888888899999999999999999999887 9999988776555
Q ss_pred HHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHHHHHH
Q 013992 201 LQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRGLIAG 280 (432)
Q Consensus 201 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (432)
+..+..++.||+++ ++++ +++.++...+.++.+|+|+++...+..
T Consensus 170 ~~~~~~~~~~~~~~----~~~~-------------------------------~~~~~~~~~~~~~i~~~~~~~~~~~~~ 214 (382)
T PRK11128 170 SMLLGQLLRPTIMP----QGES-------------------------------RQQESAGWPAWKALLKEPTVWRFLLCV 214 (382)
T ss_pred HHHHHHHccCCCCC----cccc-------------------------------ccccccccchHHHHHcChhHHHHHHHH
Confidence 44444444454321 0000 000011123567889999887755544
Q ss_pred HHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHHHHHHH
Q 013992 281 VGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILSLGVLS 360 (432)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 360 (432)
++... .......+.|.|.++.+. ++.+.+.......+..++..++.+++.||+++|+.+..+.....+...++.
T Consensus 215 ~l~~~-----~~~~~~~~~~~~~~~~g~-s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~ 288 (382)
T PRK11128 215 SLLQG-----SHAAYYGFSAIYWQAAGY-SASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMG 288 (382)
T ss_pred HHHHH-----HhHhHHHHHHHHHHHCCC-CHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Confidence 43332 344555666788877544 466677777788888899999999999999999998888777777655443
No 84
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.91 E-value=6.6e-23 Score=193.02 Aligned_cols=277 Identities=16% Similarity=0.021 Sum_probs=200.0
Q ss_pred HhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccc-----cchH-HHHHHHHHHHH
Q 013992 38 IGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRF-----GRRT-SILVADFLFFV 111 (432)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~-----Grr~-~l~~~~~~~~~ 111 (432)
..++.+++........+|.+.++.|.+.++. |++..+... .+..+++|+++||+ |||| .++.+.++.++
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~i---g~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l 80 (402)
T PRK11902 6 LLGFASGLPLALTSGTLQAWMTVEGLDIQTI---GFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAA 80 (402)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHcCCCHHHH---HHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHH
Confidence 3456677777888889999999999999998 888666665 58899999999999 8875 78888888888
Q ss_pred HHHHHHHh---CChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCch
Q 013992 112 GAVIMAAA---PNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTW 188 (432)
Q Consensus 112 ~~~~~~~~---~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~w 188 (432)
+..+.++. .+++.+.+..++.+++.+...+...+++.|++|+|+|+++.++...+..+|..+++.++..+.+...+|
T Consensus 81 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw 160 (402)
T PRK11902 81 SIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGW 160 (402)
T ss_pred HHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCH
Confidence 88887776 356777778788888888888999999999999999999999999999999999999999888854249
Q ss_pred HHHHHhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhh
Q 013992 189 RWMLGVAGIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLL 268 (432)
Q Consensus 189 r~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (432)
|..|++.++..++..+..++.||+++. +++.++. +++.....++++
T Consensus 161 ~~~f~i~a~~~l~~~l~~~~~~e~~~~---~~~~~~~-------------------------------~~~~~~~~~~l~ 206 (402)
T PRK11902 161 GNTYLLMAGLMLAGALTTLWAPEPEVP---ARPPRSL-------------------------------GEAVVGPLRDFF 206 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccc---ccccchh-------------------------------HHHHHHHHHHHH
Confidence 999999888776666556667776431 0000000 000122456788
Q ss_pred cccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHH-HHHHHHHHHHHHHHHHhhhCCchhhHh
Q 013992 269 KTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLV-TSGLNAAGSIVSIYFIDRTGRKKLLVI 347 (432)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~l~d~~~~~~~~~~ 347 (432)
|+|.++...+..++... .......+.+.++.+..+.++.+.+..... ..++.+++.++.+++.||+++|+.+..
T Consensus 207 ~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~ 281 (402)
T PRK11902 207 SRRGAWALLLLIVLYKL-----GDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLML 281 (402)
T ss_pred hCcCHHHHHHHHHHHHh-----HHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 88888765544333222 111111233344444445556667776544 344678999999999999999988776
Q ss_pred HHHHHHHHHHH
Q 013992 348 SLSGVILSLGV 358 (432)
Q Consensus 348 ~~~~~~~~~~~ 358 (432)
+..+..+..+.
T Consensus 282 ~~~~~~l~~l~ 292 (402)
T PRK11902 282 FGVLQAVSNLG 292 (402)
T ss_pred HHHHHHHHHHH
Confidence 66655554433
No 85
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.90 E-value=2.7e-25 Score=193.97 Aligned_cols=243 Identities=15% Similarity=0.099 Sum_probs=192.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHH
Q 013992 69 LLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYIS 148 (432)
Q Consensus 69 ~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~ 148 (432)
...|++.+...+...+.+++.|.+.||+|+|..+++|++++..+++++++.++++.+++.|.+||+|.+...+...++++
T Consensus 106 ~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglamlA 185 (464)
T KOG3764|consen 106 TQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAMLA 185 (464)
T ss_pred cchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHHH
Confidence 34499999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCccc-chhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHH
Q 013992 149 EASPAKI-RGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFILMLLLPESPRWLYRKGREEEAQA 227 (432)
Q Consensus 149 ~~~~~~~-R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 227 (432)
|.+|+++ |++++|+.-.+.++|..+||+.++.+.+..| .+..|++.++++++-..+.+++-|..+
T Consensus 186 d~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~G-k~aPFlVL~~v~Lld~~L~l~vi~p~~------------- 251 (464)
T KOG3764|consen 186 DVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAG-KSAPFLVLAIVLLLDGALQLLVIEPTE------------- 251 (464)
T ss_pred HHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcC-CcCcHHHHHHHHHHHHHHHHheeCccc-------------
Confidence 9999755 7999999999999999999999999999988 999999999999988888555533311
Q ss_pred HHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcC
Q 013992 228 ILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSG 307 (432)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (432)
.+++...+..+.++++++|..+.......... .......-.++.+..+..
T Consensus 252 -------------------------~~~~~~~~~~~~~~Ll~dP~I~~~agai~~~n-----~~lafLePtlslwm~e~m 301 (464)
T KOG3764|consen 252 -------------------------MDPDSTEQGTPMWSLLMDPYILLIAGAITFSN-----SSLAFLEPTLSLWMLETM 301 (464)
T ss_pred -------------------------cCccccccCccHHHHHhCchHhhhhcchhhcc-----chHHHhCcccHHHHHHhc
Confidence 01112334556789999998865333222111 122233333445455554
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHH
Q 013992 308 FASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILS 355 (432)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 355 (432)
..+.-+.++..++..+...++..+.|.+.||++..+++.....+..++
T Consensus 302 ~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G 349 (464)
T KOG3764|consen 302 FTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVG 349 (464)
T ss_pred cCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHH
Confidence 555557889999999999999999999999999654444444344444
No 86
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.90 E-value=7.7e-24 Score=183.88 Aligned_cols=145 Identities=21% Similarity=0.211 Sum_probs=119.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHH
Q 013992 67 KTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLY 146 (432)
Q Consensus 67 ~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~ 146 (432)
.....|++.+.+.+...+.++.+|.++||+|||++++++++...+..++.+.++|+..+++.|++.|+..| ......++
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kg-nl~v~rAi 144 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKG-NLSVIRAI 144 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-chHHHHHH
Confidence 34445999999999999999999999999999999999999999999999999999777778999999988 45667799
Q ss_pred HHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccC---CCCchHHHH--HhhHHHHHH-HHHHHhhcCCC
Q 013992 147 ISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTR---APGTWRWML--GVAGIPALL-QFILMLLLPES 212 (432)
Q Consensus 147 i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~---~~~~wr~~f--~~~~~~~~~-~~~~~~~~~e~ 212 (432)
++|.+++|+|+++++.++...++|.++||.+++++.. ..+....++ ++..+.... .....+++||+
T Consensus 145 isdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpET 216 (451)
T KOG2615|consen 145 ISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPET 216 (451)
T ss_pred HHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 9999999999999999999999999999999999987 333222222 112222222 33446778998
No 87
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.90 E-value=3.3e-22 Score=188.07 Aligned_cols=279 Identities=14% Similarity=0.054 Sum_probs=187.9
Q ss_pred hcccceeccccchhhhhh-hhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHH--
Q 013992 40 GLLFGYDTGVISGALLYI-RDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIM-- 116 (432)
Q Consensus 40 ~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~-- 116 (432)
.++.+.......+.+|.. .+++|.+..+. +++.+.+.++..+++++.|+++||+|||+.++.+.....++....
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~---g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~ 87 (396)
T TIGR00882 11 FFLYFFIMSAYFPFFPIWLHDVNGLSKTDT---GIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFI 87 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 344444455566666654 56789988888 999999999999999999999999999999988776665544322
Q ss_pred -HHhC-----ChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHH
Q 013992 117 -AAAP-----NPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRW 190 (432)
Q Consensus 117 -~~~~-----~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~ 190 (432)
.+.+ .....++.|++.|++.+...+....+..|..+ ++++..+......++|.++++.+++.+.+. +||+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~--~~~~ 163 (396)
T TIGR00882 88 YVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFSI--DPQI 163 (396)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhcc--CchH
Confidence 2222 23345667888898888888888777777533 345666777788899999999999988765 5999
Q ss_pred HHHhhHHHHHHHHHHHhh-cCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhc
Q 013992 191 MLGVAGIPALLQFILMLL-LPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLK 269 (432)
Q Consensus 191 ~f~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (432)
.|++.++..++..++.+. .||+|+. ++..+ ..+.++++.+.++.++.+|
T Consensus 164 ~f~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-----------------------~~~~~~~~~~~~~~~~~l~ 213 (396)
T TIGR00882 164 VFWLGSGFALILMLLLMFAKPKAPSS-------ATVAN-----------------------ALGANASAFSLKLALELFR 213 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCchh-------hhhhc-----------------------ccccccCCCCHHHHHHHHc
Confidence 999988877776655444 3443220 00000 0000011122345678899
Q ss_pred ccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcC---CCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhH
Q 013992 270 TRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSG---FASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLV 346 (432)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~ 346 (432)
+|+++...+..+.... .+.....+.+.|+++.. +.+....+.......+...++.+..+++.||+++|+.+.
T Consensus 214 ~~~~~~~~l~~~~~~~-----~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~ 288 (396)
T TIGR00882 214 QRKFWMFVLYVVGVAC-----VYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALL 288 (396)
T ss_pred CCcHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHH
Confidence 9987654443322221 33344445666666543 233445677777777888889999999999999999988
Q ss_pred hHHHHHHHHHHHHH
Q 013992 347 ISLSGVILSLGVLS 360 (432)
Q Consensus 347 ~~~~~~~~~~~~~~ 360 (432)
++..+..+...+..
T Consensus 289 ~~~~l~~l~~~~~~ 302 (396)
T TIGR00882 289 IAGTIMSVRIIGSS 302 (396)
T ss_pred HHHHHHHHHHHHHH
Confidence 88777776554433
No 88
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.89 E-value=1.8e-22 Score=191.32 Aligned_cols=272 Identities=15% Similarity=0.065 Sum_probs=171.2
Q ss_pred cccchhhhh-hhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHH---HhC---
Q 013992 48 GVISGALLY-IRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMA---AAP--- 120 (432)
Q Consensus 48 ~~~~~~~~~-i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~~--- 120 (432)
....+.+|. +.+++|.+..+. +++.+.+.++..+++++.|+++||+|||++++.+..+..++..... .++
T Consensus 27 ~~~~~~~~~~l~~~~g~s~~~~---g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (420)
T PRK09528 27 SSWFSFFPIWLHDINGLSGTDT---GIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQ 103 (420)
T ss_pred HHHHHHHHHHHHHhcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555554 556699998888 9999999999999999999999999999999887666554433211 111
Q ss_pred --ChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHH
Q 013992 121 --NPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIP 198 (432)
Q Consensus 121 --~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~ 198 (432)
......+++++.|.+.....+....+..+ . .++|++.++.......+|..+++.+++.+.+. +|++.|++.++.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~--~~~~~f~~~~~~ 179 (420)
T PRK09528 104 YNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFNI--NPQINFWLGSGS 179 (420)
T ss_pred HHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHhc--CchHhHHHHHHH
Confidence 11112233444444333333333333322 2 34567788888888999999999999998775 599999998877
Q ss_pred HHHHHHHHhhcC-CCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHHH
Q 013992 199 ALLQFILMLLLP-ESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRGL 277 (432)
Q Consensus 199 ~~~~~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (432)
.++..+..++.+ |+++... +. ++ +.+++++.+..+.++.+|+|.++...
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~-~~--~~---------------------------~~~~~~~~~~~~~~~~l~~~~~~~l~ 229 (420)
T PRK09528 180 ALILLVLLFFAKPDAPSTAK-VA--NA---------------------------LGANASAVSLKDALALLKLPKFWFLV 229 (420)
T ss_pred HHHHHHHHhcccccccchhh-hc--cc---------------------------hhcccccccHHHHHHHccCCCeEeeh
Confidence 776666655543 3321000 00 00 00001111223445678888877644
Q ss_pred HHHHHHHHHhhhcchHHHHHhHHHHHHHcC---CCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHH
Q 013992 278 IAGVGLQVFQQFVGINTVMYYSPTIVQLSG---FASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVIL 354 (432)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 354 (432)
+..+.... .+.....+.|.|+.+.. +.+....+.......+...++.++.|++.||+++|+.+..+..+..+
T Consensus 230 l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~ 304 (420)
T PRK09528 230 LYVIGVAC-----FYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAV 304 (420)
T ss_pred HHHHHHHH-----HHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHH
Confidence 43222222 22233334555554331 33345667777777888889999999999999999998888777777
Q ss_pred HHHHHHH
Q 013992 355 SLGVLSA 361 (432)
Q Consensus 355 ~~~~~~~ 361 (432)
...++.+
T Consensus 305 ~~~l~~~ 311 (420)
T PRK09528 305 RIIGSGF 311 (420)
T ss_pred HHHHHHh
Confidence 6655543
No 89
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.89 E-value=3e-23 Score=196.65 Aligned_cols=342 Identities=17% Similarity=0.137 Sum_probs=235.7
Q ss_pred CChhHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHH
Q 013992 25 KNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILV 104 (432)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~ 104 (432)
...+-|.+++..++..+...-....++...+.+.++++.+..+. +|+.++......+..|+.+.+.||||.|++.+.
T Consensus 40 dGG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~---~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~ 116 (509)
T KOG2504|consen 40 DGGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQI---AWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIA 116 (509)
T ss_pred CCCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHH---HHHHHHHHHHHHHhccHHHHHHhhcCchHHHHH
Confidence 56778888888877777665556667789999999999988887 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCChhHHHHHH-hhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccC
Q 013992 105 ADFLFFVGAVIMAAAPNPGALITGR-VFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTR 183 (432)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~r-~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~ 183 (432)
|.++.+++.++.+++++++++++.. ++.|+|.|..+......+..+|++| |+.+.|+...+.++|..+-|.+...+.+
T Consensus 117 G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kk-R~lA~Gia~~GsG~G~~~~~~l~~~l~~ 195 (509)
T KOG2504|consen 117 GGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKK-RALATGIAVSGTGVGTVVFPPLLKYLLS 195 (509)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHH-HHHHHhhhhccCCcceeeHHHHHHHHHH
Confidence 9999999999999999999988876 8899999999999999999888655 9999999999999999999999999998
Q ss_pred CCCchHHHHHhhHHHHHHHHHHHhhcCC-CHHHHHHcCCHHHHHHH---HHHhC--------CCCchHHHHHHHHHHhHH
Q 013992 184 APGTWRWMLGVAGIPALLQFILMLLLPE-SPRWLYRKGREEEAQAI---LRKVY--------PAHEVETEIRDLKESVDK 251 (432)
Q Consensus 184 ~~~~wr~~f~~~~~~~~~~~~~~~~~~e-~~~~~~~~~~~~~~~~~---~~~~~--------~~~~~~~~~~~~~~~~~~ 251 (432)
..| ||+.+++.+.+.+-..+....+++ +++. .++ ..++.+.. .+... ..+..... .........
T Consensus 196 ~~G-~r~~~l~~~~~~l~~~~~~~~~rp~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 271 (509)
T KOG2504|consen 196 KYG-WRGALLIFGGISLNVLVAGALLRPLSPPK-KPN-EEKDLRNSAASVESTPKPVELRISERDSGLKK-LSLSNLATL 271 (509)
T ss_pred HhC-cHHHHHHHHHHHHHHHHHHHHcCCCCcCC-Cch-hhhhhccccccccccccccccccccCCCCCCc-ccccchhhh
Confidence 888 999999988877666666444433 2210 000 00000000 00000 00000000 000000000
Q ss_pred HH--HHcc--Cccchh---HHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHH
Q 013992 252 EI--EEEG--SSEKIN---LVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGL 324 (432)
Q Consensus 252 ~~--~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (432)
++ ++.. ..+... ..++++++.++...+...+.. .++.....++|.|....+.. ..++..+..+.++.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~-----~g~~~p~~~l~~~~~~~g~~-~~~aa~l~Siigi~ 345 (509)
T KOG2504|consen 272 KRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAY-----LGFNVPFVYLPSYAKSLGLS-SNDAAFLLSIIGVS 345 (509)
T ss_pred hhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHH-----HHHHHHHHHHHHHHhhcCCC-hhhhHHHHHHHHHh
Confidence 00 0000 111112 268888887766555444433 37888888999999966655 66677777778999
Q ss_pred HHHHHHHHHHHHhhhCCchhhHhHHHHHHHHHHHHHHHHhccCCCCCccchhccccc
Q 013992 325 NAAGSIVSIYFIDRTGRKKLLVISLSGVILSLGVLSAVFHETTSHSPMVSAVETSHF 381 (432)
Q Consensus 325 ~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (432)
.++++++.|++.|+...++.......+...++..+... ...+.+.+....+.+++.
T Consensus 346 ~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p-~~~~~~~l~~~~~~fG~~ 401 (509)
T KOG2504|consen 346 DIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLP-FATTYVGLIVFSILFGFC 401 (509)
T ss_pred hhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHH
Confidence 99999999999999885444444333333333332222 223334444445555544
No 90
>PTZ00207 hypothetical protein; Provisional
Probab=99.89 E-value=1.9e-21 Score=185.88 Aligned_cols=178 Identities=13% Similarity=0.111 Sum_probs=140.6
Q ss_pred CChhHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHH
Q 013992 25 KNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILV 104 (432)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~ 104 (432)
+.++||..+..........+.. ..++...|.+.+++|.+..+. +++.++. ......+++.|++.||+|||+++++
T Consensus 22 ~e~~Rw~~lva~~~~~~~~g~~-y~fsv~s~~L~~~lgls~~~l---~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vlli 96 (591)
T PTZ00207 22 NEPRRFALLVLGAFCSICTSFM-YAFNLISGAMQARYNLTQRDL---STITTVG-IAVGYFLLPYSFIYDYLGPRPIFVL 96 (591)
T ss_pred cccchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCcCHHHH---HHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 3456676666555544444433 346678889999999998887 7777663 3445678889999999999999999
Q ss_pred HHHHHHHHHHHHHHh------CChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHH-HHHH
Q 013992 105 ADFLFFVGAVIMAAA------PNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFL-SYLI 177 (432)
Q Consensus 105 ~~~~~~~~~~~~~~~------~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i-~~~i 177 (432)
+.+++++++++++++ ++++.+.+.|++.|++.+...+.+...+.+||| ++||++.++...+..+|.++ +++.
T Consensus 97 g~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~ 175 (591)
T PTZ00207 97 SMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQ 175 (591)
T ss_pred HHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999997 689999999999999999999999999999997 67999999999999999976 5555
Q ss_pred HhhccCCCCchHHHHHhhHHHHHHHHHH-HhhcCC
Q 013992 178 NLAFTRAPGTWRWMLGVAGIPALLQFIL-MLLLPE 211 (432)
Q Consensus 178 ~~~l~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~e 211 (432)
..++. . +|+..|++.++..++..++ +.++++
T Consensus 176 ~~l~~--~-~~~~~fl~l~vl~~vv~ll~~~~vr~ 207 (591)
T PTZ00207 176 LAFFS--D-NTSAYFFFLMSFALVVGILAIVFMRL 207 (591)
T ss_pred HHHHH--H-hHHHHHHHHHHHHHHHHHHHHhheeC
Confidence 54443 2 4999888888777766555 444433
No 91
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.89 E-value=6.9e-22 Score=188.87 Aligned_cols=171 Identities=11% Similarity=0.143 Sum_probs=138.8
Q ss_pred HHHhhcccceecccc-chhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcc-ccchHHHHHHHHHHHHHH
Q 013992 36 AGIGGLLFGYDTGVI-SGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDR-FGRRTSILVADFLFFVGA 113 (432)
Q Consensus 36 ~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~ 113 (432)
+++..+...+..... .....++.+++|.++.+. +++.+.+.....+..+++|+++|| +||||+++.+.+++.++.
T Consensus 19 ~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a---~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~ 95 (489)
T PRK10207 19 IFFVELWERFGYYGVQGILAVFFVKQLGFSQEQA---FITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGY 95 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH---HHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHH
Confidence 333444444444333 345556778899988888 889999988888888999999999 999999999999999999
Q ss_pred HHHHHhCChhH-HHHHHhhhhccccchhhhHHHHHHhcCCccc--chhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHH
Q 013992 114 VIMAAAPNPGA-LITGRVFVGLGVGMASMTSPLYISEASPAKI--RGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRW 190 (432)
Q Consensus 114 ~~~~~~~~~~~-~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~--R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~ 190 (432)
++++++++... +.++|+++|+|.|...+...+++.|.+|+++ |++++++++.+.++|..+||.+++++.+..+ ||+
T Consensus 96 ~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~g-w~~ 174 (489)
T PRK10207 96 FMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFG-YSV 174 (489)
T ss_pred HHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhC-hHH
Confidence 99999877554 4589999999999999999999999999874 5788999999999999999999999999887 999
Q ss_pred HHHhhHHHHHHHHHHHhhcC
Q 013992 191 MLGVAGIPALLQFILMLLLP 210 (432)
Q Consensus 191 ~f~~~~~~~~~~~~~~~~~~ 210 (432)
.|++.++..++..+.+.+.+
T Consensus 175 ~F~i~~i~~~~~~~~~~~~~ 194 (489)
T PRK10207 175 TYNLCGAGLIIALLVYFACR 194 (489)
T ss_pred HHHHHHHHHHHHHHHHHHcc
Confidence 99987654443444444443
No 92
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.88 E-value=4e-22 Score=187.87 Aligned_cols=321 Identities=13% Similarity=0.044 Sum_probs=203.2
Q ss_pred cccceecccc-chhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccc-hHHHHHHHHHHHHHHHHHHH
Q 013992 41 LLFGYDTGVI-SGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGR-RTSILVADFLFFVGAVIMAA 118 (432)
Q Consensus 41 ~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Gr-r~~l~~~~~~~~~~~~~~~~ 118 (432)
+..+...... ++..+++.+++|.+..+. |++.+++.++..++++++|+++||+|| |+++.++.++..++..+..+
T Consensus 12 ~~~~~~~~~~~~~l~~~l~~~~g~s~~~i---Gl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~ 88 (418)
T TIGR00889 12 FLQWFIWGSWLVTLGSYMSKTLHFSGAEI---GWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQ 88 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444 455566778899998888 999999999999999999999999965 77888888888888888899
Q ss_pred hCChhHHHHHHhhhhccccchhhhHHHHHH--------hcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHH
Q 013992 119 APNPGALITGRVFVGLGVGMASMTSPLYIS--------EASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRW 190 (432)
Q Consensus 119 ~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~--------~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~ 190 (432)
.++++.+.+.|++.|++.+...+...+... |......|.+..| .+|.++++.+++.+.... .|+.
T Consensus 89 ~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~-~~~~ 161 (418)
T TIGR00889 89 VTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIEL-SNIQ 161 (418)
T ss_pred hcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccc-hhHH
Confidence 999999999999999987777666555432 2233334555554 367888888888773332 2654
Q ss_pred HHHhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcc
Q 013992 191 MLGVAGIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKT 270 (432)
Q Consensus 191 ~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (432)
|++.++..++..+..+++||+|+. ++++++ +. + +..+.+.++.+|+
T Consensus 162 -f~~~~~~~~~~~~~~~~~~e~~~~---~~~~~~-------------------------~~--~---~~~~~~~~~~~k~ 207 (418)
T TIGR00889 162 -LYITAGSSALLGVFALTLPDIPVA---KSTAKM-------------------------SI--K---VMLGLDAFILFKN 207 (418)
T ss_pred -HHHHHHHHHHHHHHHhcCCCCCCC---cccccc-------------------------CH--H---HHhhhhHHHHhcC
Confidence 445555455555556677887521 000000 00 0 0011234567888
Q ss_pred cchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCc-------hhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCch
Q 013992 271 RTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFAS-------NRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKK 343 (432)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 343 (432)
|+++...+..++... .......+.+.++++.+.++ ....+.......+..+++.+..|+++||+|+|+
T Consensus 208 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~ 282 (418)
T TIGR00889 208 KRMAIFFFFSMLLGA-----PLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKK 282 (418)
T ss_pred CCeeeHHHHHHHHHh-----HHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH
Confidence 887665544333322 23344456677777655332 245677778788889999999999999999999
Q ss_pred hhHhHHHHHHHHHHHHHHHHhcc-CCCCCccchhcccccccccccccccccccCccchhhhhccCCCCccccc
Q 013992 344 LLVISLSGVILSLGVLSAVFHET-TSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCA 415 (432)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~ 415 (432)
.+..+..+..+...++....... ..+...+..++.+.......+... .......|++.|++ +.|+.+
T Consensus 283 ~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~---~~i~~~~p~~~~g~--~~g~~~ 350 (418)
T TIGR00889 283 VMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGS---VFVEKEVPVHIRAS--AQGLFT 350 (418)
T ss_pred HHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHCCHHHHHH--HHHHHH
Confidence 99998887777665554421111 011111112222222112111111 22233556699999 888875
No 93
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.88 E-value=1.2e-20 Score=163.77 Aligned_cols=284 Identities=17% Similarity=0.192 Sum_probs=226.0
Q ss_pred HHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHH
Q 013992 30 LRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLF 109 (432)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 109 (432)
+..+..+.+..+--=-..+..+|.++.+.+|+|.+.... |++.++..+...+.+++..+++.|+|.++.+..++++.
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~a---GlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli 87 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVA---GLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLI 87 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHH---HHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHH
Confidence 344444433334333456678999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchH
Q 013992 110 FVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWR 189 (432)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr 189 (432)
+++..+-... +...++.+-.+.|.+.+......+.++-+.||+| -+..+++++.....|..+++.+...+.++.++||
T Consensus 88 ~~G~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~ 165 (395)
T COG2807 88 AAGILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWR 165 (395)
T ss_pred HHHHHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHH
Confidence 9999998887 7888889999999999999999999999999976 6999999999999999999999988888875699
Q ss_pred HHHHhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhc
Q 013992 190 WMLGVAGIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLK 269 (432)
Q Consensus 190 ~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (432)
....+.++++++.++.|+--...++ ....+.+..+..+++|
T Consensus 166 ~aL~~WAl~allAl~~WlPq~~r~~---------------------------------------~~~~~~~~~~~~~vw~ 206 (395)
T COG2807 166 GALGFWALLALLALLIWLPQALREQ---------------------------------------AASIATKLVSVRKVWR 206 (395)
T ss_pred HHHHHHHHHHHHHHHHHhhhccccc---------------------------------------cccccccccccccccc
Confidence 9999999999888877654321100 0111112223356889
Q ss_pred ccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhC-CchhhHhH
Q 013992 270 TRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTG-RKKLLVIS 348 (432)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~-~~~~~~~~ 348 (432)
+|.-|...+ ++..+...++....|+|.++.+.+.+ +.+++.+.....+..++..+....+.+|.. +|+.....
T Consensus 207 ~~~aW~vtL-----fmGlqS~~~Y~~~~WLP~ili~~G~s-a~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~ 280 (395)
T COG2807 207 SPLAWQVTL-----FMGLQSLLYYIVIGWLPAILIDRGLS-AAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLA 280 (395)
T ss_pred CchhHHHHH-----HHHhhHHHHHHHHHHHHHHHHHcCCC-HHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHH
Confidence 998877443 44555568899999999999998877 667777777788999999999999999765 45556666
Q ss_pred HHHHHHHHHHHHHHH
Q 013992 349 LSGVILSLGVLSAVF 363 (432)
Q Consensus 349 ~~~~~~~~~~~~~~~ 363 (432)
..++.++.+.+.+..
T Consensus 281 ~~~~l~G~~G~~~~P 295 (395)
T COG2807 281 LLLMLVGLVGLLLAP 295 (395)
T ss_pred HHHHHHHHHHHHHhh
Confidence 666666666665543
No 94
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.87 E-value=5.9e-22 Score=189.08 Aligned_cols=265 Identities=15% Similarity=0.104 Sum_probs=185.0
Q ss_pred hhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcc----ccchH-HHHHHHHHHHHHHHHHHHhCC------
Q 013992 53 ALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDR----FGRRT-SILVADFLFFVGAVIMAAAPN------ 121 (432)
Q Consensus 53 ~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr----~Grr~-~l~~~~~~~~~~~~~~~~~~~------ 121 (432)
..+++.+++|+++.+. |++.++..+..++..|+.|+++|| +|||| .++.+....+++.+++...++
T Consensus 22 l~~~~~~~~g~s~~~~---g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~ 98 (437)
T TIGR00792 22 LLFFYTDVLGLSAAFV---GTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGK 98 (437)
T ss_pred HHHHHHHccCCCHHHH---HHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchH
Confidence 4566778899998888 999999999999999999999997 68754 567788888888888877664
Q ss_pred hhHHHHHHhhhhccccchhhhHHHHHHhcC-CcccchhHHHHHHHHHHHHHHHHHHHHhhcc-------CCCCchHHHHH
Q 013992 122 PGALITGRVFVGLGVGMASMTSPLYISEAS-PAKIRGALVSTNGFLITSGQFLSYLINLAFT-------RAPGTWRWMLG 193 (432)
Q Consensus 122 ~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~-------~~~~~wr~~f~ 193 (432)
...+++.+++.+++.+...+...++..|.. ++++|++..++.+.+..+|..++..+.+.+. +.. +||+.+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~-g~~~~~~ 177 (437)
T TIGR00792 99 LVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKF-GWFMFAL 177 (437)
T ss_pred HHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccc-cHHHHHH
Confidence 345667788888888877777778888987 4688999999988888888777665544333 123 4999999
Q ss_pred hhHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccc
Q 013992 194 VAGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRT 272 (432)
Q Consensus 194 ~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (432)
+.+++.++..+. ++..+|+++ .+++ +++++.+.....++++++|.
T Consensus 178 i~~~l~~~~~~~~~~~~~e~~~-----~~~~-----------------------------~~~~~~~~~~~~~~l~~~~~ 223 (437)
T TIGR00792 178 VLALIGVVSLIICFFGTKERYS-----EIPK-----------------------------NIEKKLSLKQIFKALFKNDQ 223 (437)
T ss_pred HHHHHHHHHHHHHHcCCEecCC-----CCCc-----------------------------ccccCCCHHHHHHHHhCCHH
Confidence 988877766655 555666531 0000 00001111234567788888
Q ss_pred hhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHH
Q 013992 273 VRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGV 352 (432)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 352 (432)
++...+..++... .......+.+.|.+...+. ....+.......++.+++.++.+++.||+|+|+.+..+..+.
T Consensus 224 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~ 297 (437)
T TIGR00792 224 LLILCLAYLFYNL-----AFNIKNGVQVYYFTYVLGD-PELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLM 297 (437)
T ss_pred HHHHHHHHHHHHH-----HHHHHcchhheeEeeecCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 7764443333222 2333333445555444443 445555666678889999999999999999999998888777
Q ss_pred HHHHHHHHH
Q 013992 353 ILSLGVLSA 361 (432)
Q Consensus 353 ~~~~~~~~~ 361 (432)
.++.+.+.+
T Consensus 298 ~~~~~~~~~ 306 (437)
T TIGR00792 298 VLGYLIFFF 306 (437)
T ss_pred HHHHHHHHH
Confidence 776655544
No 95
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.86 E-value=2.1e-20 Score=178.63 Aligned_cols=169 Identities=14% Similarity=0.218 Sum_probs=144.1
Q ss_pred HHhhcccceeccccchhhhhh-hhc--cccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcc-ccchHHHHHHHHHHHHH
Q 013992 37 GIGGLLFGYDTGVISGALLYI-RDD--FKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDR-FGRRTSILVADFLFFVG 112 (432)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~i-~~~--~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~~~ 112 (432)
++..+...+......+.+|.+ .++ +|.+..+. +++.+.+.++..++++++|+++|| +|||++++.+.++.+++
T Consensus 16 ~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~a---g~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g 92 (475)
T TIGR00924 16 FFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQA---FIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLG 92 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHH---HHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHH
Confidence 344455555555556666655 444 88888888 999999999999999999999999 89999999999999999
Q ss_pred HHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCccc---chhHHHHHHHHHHHHHHHHHHHHhhccCCCCchH
Q 013992 113 AVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKI---RGALVSTNGFLITSGQFLSYLINLAFTRAPGTWR 189 (432)
Q Consensus 113 ~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~---R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr 189 (432)
.++.+++++++.+.++|.+.|++.|...+...++++|++|+++ |++++++++.+.++|..+|+.+++++.+..+ ||
T Consensus 93 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g-~~ 171 (475)
T TIGR00924 93 HFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYG-YH 171 (475)
T ss_pred HHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcC-hH
Confidence 9999999999999999999999999999999999999998765 8889999999999999999999999988777 99
Q ss_pred HHHHhhHHHHHHHHHHHhhc
Q 013992 190 WMLGVAGIPALLQFILMLLL 209 (432)
Q Consensus 190 ~~f~~~~~~~~~~~~~~~~~ 209 (432)
+.|.+.++..++..+.+++.
T Consensus 172 ~~f~~~~~~~~~~~l~~~~~ 191 (475)
T TIGR00924 172 VGFNLAAVGMVIGLLTFFAG 191 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHc
Confidence 99999886555554444443
No 96
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.86 E-value=5.3e-21 Score=182.26 Aligned_cols=332 Identities=13% Similarity=0.084 Sum_probs=229.1
Q ss_pred HHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHH
Q 013992 35 SAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAV 114 (432)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 114 (432)
.++++.+++.+...+.....+.+..+..-++... +++..+..+...+.++++|.++||++|||+++.+.++..+..+
T Consensus 14 ~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~v---alv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~ 90 (524)
T PF05977_consen 14 RLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMV---ALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVAL 90 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH---HHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHH
Confidence 3445555556666666677777776665555555 9999999999999999999999999999999999888776655
Q ss_pred HHHH-----hCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchH
Q 013992 115 IMAA-----APNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWR 189 (432)
Q Consensus 115 ~~~~-----~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr 189 (432)
..++ ..+.+.+++.-++.|++.+...|...+++.|..|+++...+.++.+...++...+||.++|.+....| -.
T Consensus 91 ~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G-~~ 169 (524)
T PF05977_consen 91 LLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFG-AA 169 (524)
T ss_pred HHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHH-HH
Confidence 4433 24788899999999999999999999999999999999999999999999999999999999988766 78
Q ss_pred HHHHhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhc
Q 013992 190 WMLGVAGIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLK 269 (432)
Q Consensus 190 ~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (432)
+.|.+.++..++........++.++ +++.++ +...+.-+...+-..+
T Consensus 170 ~~f~inalsfl~~i~~l~~~~~~~~----~~~~~~-----------------------------e~~~~~l~~G~ryv~~ 216 (524)
T PF05977_consen 170 AAFLINALSFLISILALLRWKPPPP----PSSLPR-----------------------------ERFFSALREGLRYVRS 216 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHcccccc----ccccch-----------------------------hhhhhhHHHHHHHHhc
Confidence 8888887765555444444433211 000000 0000011123334445
Q ss_pred ccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHH
Q 013992 270 TRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISL 349 (432)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~ 349 (432)
+|.++..++......+ ....+...+|.+.++..+.++...|++....+++.++|.++.+++.+|+++++.+..+.
T Consensus 217 ~~~l~~~l~~~~~~~l-----~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~ 291 (524)
T PF05977_consen 217 SPPLRSVLLRSFLFNL-----FASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLAS 291 (524)
T ss_pred chHHHHHHHHHHHHHH-----hhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHH
Confidence 5555543333222222 22334456788888777777888899999999999999999999999999888888887
Q ss_pred HHHHHHHHHHHHHHhccCCCCCccchhcccccccccccccccccccCccchhhhhccCCCCcccccc
Q 013992 350 SGVILSLGVLSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCAS 416 (432)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~ 416 (432)
.+.+++++.+.+.. +.+......++.|.........+. ...+...|+++||+ ..++...
T Consensus 292 ~~~a~~~~~lal~~---~~~~~~~~l~l~G~~~~~~~~~~~---t~~Q~~~P~~~~GR--v~si~~~ 350 (524)
T PF05977_consen 292 LLFALALLLLALSP---SFWLALIALFLAGAAWIIANSSLN---TLVQLSVPDWVRGR--VFSIYQM 350 (524)
T ss_pred HHHHHHHHHHhcch---HHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhCCHHHHhH--HHHHHHH
Confidence 77776665555532 222223333333333333222222 33455666799999 7776543
No 97
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.85 E-value=2e-20 Score=175.56 Aligned_cols=275 Identities=12% Similarity=0.017 Sum_probs=190.1
Q ss_pred HHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHH--HHHHHHHHHHHHHhhhh-hhccccchHHHHHHHHHH
Q 013992 33 AFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESI--VSMAVAGAIIGAAIGGW-MNDRFGRRTSILVADFLF 109 (432)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~s~~~~~~~i~~~~~g~-l~dr~Grr~~l~~~~~~~ 109 (432)
+..++..++.+++......+.+|.+.+|.|.+..+. |+. .++..+...+.+|+++. ..||+||||..+....+.
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~i---Gl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~ 79 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTAL---AFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCL 79 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHH---HHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHH
Confidence 345556678889888889999999999999998888 886 46667778788888854 789999999876655332
Q ss_pred -HHHHHHHH-H--hCC-hhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCC
Q 013992 110 -FVGAVIMA-A--APN-PGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRA 184 (432)
Q Consensus 110 -~~~~~~~~-~--~~~-~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~ 184 (432)
.......+ + ..+ ...++...++.++..+...+..-++..|..++++++...+....+..+|..+++...+++.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~ 159 (390)
T TIGR02718 80 VSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGK 159 (390)
T ss_pred HHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222 1 222 333344445556666667777777888998888888888888888899999999888888887
Q ss_pred CCchHHHHHhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhH
Q 013992 185 PGTWRWMLGVAGIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINL 264 (432)
Q Consensus 185 ~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (432)
.+ ||..|++.++..++..+..++++|+++ + +.++ ++++..+.
T Consensus 160 ~g-w~~~f~~~a~l~~~~~~~~~~~~~~~~----~-~~~~--------------------------------~~~~~~~~ 201 (390)
T TIGR02718 160 FG-QRPAFLLVACVPLASLVCVLWLKDRAV----A-SPEA--------------------------------PLARRASL 201 (390)
T ss_pred hC-HHHHHHHHHHHHHHHHHHHHHcCCCCc----C-cccc--------------------------------chhhHHHH
Confidence 77 999999999887776666555544321 0 0000 00011235
Q ss_pred HHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHH-HHHHHHHHHHHHHHhhhCCch
Q 013992 265 VKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTS-GLNAAGSIVSIYFIDRTGRKK 343 (432)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~~~~~ 343 (432)
++.+|+|.++......++... .......+.+.|+++.+ .++.+.+....... ...+++.++.|++.||+++|+
T Consensus 202 ~~~l~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~l~~~G-~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~ 275 (390)
T TIGR02718 202 FRFFRRPLAWSLLALALLSAM-----TAVSGFGLSKLYLVDAG-WPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWR 275 (390)
T ss_pred HHHHcCcCHHHHHHHHHHHHH-----HHHHHHHHhhHHHHhcC-CCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 678888887664443332222 34555557788888864 45667777666554 456778899999999999999
Q ss_pred hhHhHHHHHHH
Q 013992 344 LLVISLSGVIL 354 (432)
Q Consensus 344 ~~~~~~~~~~~ 354 (432)
.+..+..+..+
T Consensus 276 ~l~~~~~~~~~ 286 (390)
T TIGR02718 276 TFILGVGLAGS 286 (390)
T ss_pred HHHHHHHHHHH
Confidence 88877665533
No 98
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.81 E-value=1.2e-18 Score=167.52 Aligned_cols=162 Identities=17% Similarity=0.291 Sum_probs=128.2
Q ss_pred hhcccceeccccch-hhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcc-ccchHHHHHHHHHHHHHHHHH
Q 013992 39 GGLLFGYDTGVISG-ALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDR-FGRRTSILVADFLFFVGAVIM 116 (432)
Q Consensus 39 ~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~ 116 (432)
..+...+....... ...++.+++|.+..+. +++.+.+........+++|+++|| +|||++++.+.++.+++..++
T Consensus 29 ~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a---~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~ 105 (500)
T PRK09584 29 IELWERFGYYGLQGIMAVYLVKQLGMSEADS---ITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALV 105 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 33334333333333 4445668899988877 677777666555666789999999 599999999999999999999
Q ss_pred HHhC-ChhHHHHHHhhhhccccchhhhHHHHHHhcCCccc--chhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHH
Q 013992 117 AAAP-NPGALITGRVFVGLGVGMASMTSPLYISEASPAKI--RGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLG 193 (432)
Q Consensus 117 ~~~~-~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~--R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~ 193 (432)
++++ +.+.+.++|+++|++.|...+...+++.|++|+++ |..++++++.+.++|..++|.+++++.+..+ ||+.|+
T Consensus 106 ~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g-~~~~F~ 184 (500)
T PRK09584 106 AWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYG-WSVAFA 184 (500)
T ss_pred HHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhC-HHHHHH
Confidence 8875 56667788999999999999998899999998654 4567888899999999999999999998877 999999
Q ss_pred hhHHHHHHHHH
Q 013992 194 VAGIPALLQFI 204 (432)
Q Consensus 194 ~~~~~~~~~~~ 204 (432)
+.++..++..+
T Consensus 185 i~~i~~~i~~i 195 (500)
T PRK09584 185 LSVVGMLITVV 195 (500)
T ss_pred HHHHHHHHHHH
Confidence 88765444443
No 99
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.80 E-value=1.6e-17 Score=148.46 Aligned_cols=351 Identities=12% Similarity=0.058 Sum_probs=230.5
Q ss_pred CCChhHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHH
Q 013992 24 WKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSIL 103 (432)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~ 103 (432)
+..++||..++..++..+.+++.+-.++++..+....|+ +.+.. -|...+|++.+....+++-|+.|++|-|..++
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~---~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~l 113 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAA---DWLSMIYMVVSVPFGFAAMWILDKFGLRTALL 113 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHH---HHHHHHHHHHHHHHhhHHHHhhcccchHHHHH
Confidence 456889999999999999999999989998888888888 44444 77888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhC------Chh--HHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHH
Q 013992 104 VADFLFFVGAVIMAAAP------NPG--ALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSY 175 (432)
Q Consensus 104 ~~~~~~~~~~~~~~~~~------~~~--~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~ 175 (432)
++..+.+++..+-..+. .++ ....+..+.+.+.-.....-..+..-|||+++|..+..+-..+..+|.+++.
T Consensus 114 lgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~ 193 (480)
T KOG2563|consen 114 LGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGF 193 (480)
T ss_pred HHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHh
Confidence 99999999998876542 344 5667788888877777666667889999999999999999999999999999
Q ss_pred HHHhhccCCC-----CchHH--HHHhhHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHH
Q 013992 176 LINLAFTRAP-----GTWRW--MLGVAGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKE 247 (432)
Q Consensus 176 ~i~~~l~~~~-----~~wr~--~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (432)
++...+.... ..|.. .|+....++.+.+++ .+..++.|+.- ...
T Consensus 194 llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tP---ps~------------------------- 245 (480)
T KOG2563|consen 194 LLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTP---PSA------------------------- 245 (480)
T ss_pred hccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC---Cch-------------------------
Confidence 9999887764 13544 344444444333333 33344433210 000
Q ss_pred HhHHHHHHccCccchhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHH
Q 013992 248 SVDKEIEEEGSSEKINLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAA 327 (432)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (432)
...++...+...+.++.++++++....+. +......++.....+..-+...+ ++...+|.......+++++
T Consensus 246 ---s~~~~~~~~f~~si~~~~~n~~F~il~~~-----ygi~~g~F~~l~~~l~~~l~~sg-Y~~~~aG~ig~l~iv~Gml 316 (480)
T KOG2563|consen 246 ---SQAALQDASFPKSIKSCFKNRQFIILAIC-----YGIGLGLFNSLSTLLNLALCPSG-YEGVFAGYIGALMIVAGML 316 (480)
T ss_pred ---hHhhhhcCcHHHHHHHHHcCccHHHHHHH-----HhhhHHHHHHHHHHhhhcccccc-CCccccchhHHHHHHHHHH
Confidence 00001122345678899999998543332 21112233333333332333333 3447788999999999999
Q ss_pred HHHHHHHHHhhhCC-chhhHhHHHHHHHHH-HHHHHHHhccCCCCCccchhcccccccccccccccccccCccchhhhhc
Q 013992 328 GSIVSIYFIDRTGR-KKLLVISLSGVILSL-GVLSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLK 405 (432)
Q Consensus 328 ~~~~~g~l~d~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 405 (432)
+.++.|.+.||.++ |.+..+......++. .+..........+.+......++++.....+...-...|..-. ..-
T Consensus 317 ga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyP---v~E 393 (480)
T KOG2563|consen 317 GALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYP---VAE 393 (480)
T ss_pred HHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccc---cCC
Confidence 99999999999876 444555555444442 2222222233333444445555555544444332222222222 333
Q ss_pred cCCCCcccccccccc
Q 013992 406 ASSPDCGFCASHSNK 420 (432)
Q Consensus 406 ~~~~~~g~~~~~~~~ 420 (432)
++ .+|+.....+.
T Consensus 394 ~t--SsGll~~~gq~ 406 (480)
T KOG2563|consen 394 GT--SSGLLNLSGQI 406 (480)
T ss_pred cc--cceeEEeehhH
Confidence 44 47766555443
No 100
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.78 E-value=2.4e-18 Score=163.39 Aligned_cols=302 Identities=17% Similarity=0.139 Sum_probs=210.1
Q ss_pred hhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhc----cccchHHHH-HHHHHHHHHHHHHHHh-C-----
Q 013992 52 GALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMND----RFGRRTSIL-VADFLFFVGAVIMAAA-P----- 120 (432)
Q Consensus 52 ~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d----r~Grr~~l~-~~~~~~~~~~~~~~~~-~----- 120 (432)
...+++.+.+|+++... +.+..+..+..++..|+.|.++| |+||||..+ .+.+..+++.++.... +
T Consensus 23 ~~~~f~~~~~gl~~~~~---g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~ 99 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALA---GLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSF 99 (428)
T ss_pred HHHHHHHHHcCCCHHHH---HHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhh
Confidence 44566777789988777 99999999999999999999999 899776654 6778888887777765 4
Q ss_pred --ChhHHHHHHhhhhccccchhhhHHHHHHhcCC-cccchhHHHHHHHHHHHHHHHHHHHHhhccCCCC------chHHH
Q 013992 121 --NPGALITGRVFVGLGVGMASMTSPLYISEASP-AKIRGALVSTNGFLITSGQFLSYLINLAFTRAPG------TWRWM 191 (432)
Q Consensus 121 --~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~------~wr~~ 191 (432)
....+.+..++..++......+..++..|..+ +++|.+..+.-..+..+|..+...+.+.+.+..+ +|++.
T Consensus 100 ~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~ 179 (428)
T PF13347_consen 100 TAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWM 179 (428)
T ss_pred hhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHH
Confidence 22335666777788888888888899999998 5789999999888888888766666665554322 59999
Q ss_pred HHhhHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcc
Q 013992 192 LGVAGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKT 270 (432)
Q Consensus 192 f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (432)
.++.+++.++..++ .+..+|+++ +.++++++.+-....++.++|
T Consensus 180 ~~v~~iv~~v~~~i~~~~~ke~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~n 224 (428)
T PF13347_consen 180 ALVLAIVGLVFFLITFFFVKERSV-----------------------------------EVTEQEKKISLRDSLRSLFRN 224 (428)
T ss_pred HHHHHHHHHHHhhhhhheeeeccc-----------------------------------cccccccccccccchhhhccc
Confidence 99888877776666 555666211 011122223334567888899
Q ss_pred cchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHH
Q 013992 271 RTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLS 350 (432)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 350 (432)
|.++......++... .........+.|.+...+.+ ...+.......+..+++.++.++++||+|+|+.+..+..
T Consensus 225 r~~~~l~~~~~~~~~-----~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~ 298 (428)
T PF13347_consen 225 RPFRILLLAFFLQWL-----AFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLL 298 (428)
T ss_pred chHHHHHHHHHHHHh-----hhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHH
Confidence 888765544333322 44445555566666665554 445566667788889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCCCccchhcccccccccccccccccccCcc
Q 013992 351 GVILSLGVLSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAATADRW 398 (432)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (432)
+.+++.+++.+... .+.+...+..++.+.+.........+..+++.+
T Consensus 299 ~~~~~~~~~~~~~~-~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id 345 (428)
T PF13347_consen 299 LAALGFLLLFFLGP-GSPWLVLILFILAGIGYGAFFVIPWAMLADVID 345 (428)
T ss_pred HHHHHHHHHHHHHh-hhHHHHHHHHHHhHhhhcccccccccccccchh
Confidence 99888877766653 233344444444444444433333333344443
No 101
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.78 E-value=8.1e-20 Score=152.49 Aligned_cols=351 Identities=16% Similarity=0.037 Sum_probs=227.4
Q ss_pred ChhHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcc-ccchHHHHH
Q 013992 26 NPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDR-FGRRTSILV 104 (432)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~l~~ 104 (432)
..+|...+..+|+..|-+++.....+....+...+.+++..+. .++.+.|..-..+.+.++|++.|| +|-|..-++
T Consensus 39 l~hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akf---tLlYsvYSwPNvVlcffgGflidr~fgir~gtii 115 (459)
T KOG4686|consen 39 LGHRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKF---TLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTII 115 (459)
T ss_pred hhhHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeee---eeeeeeccCCCEEEeeecceeehhhhhhhHHHHH
Confidence 4567778888888889999999988888888888888888787 889999999999999999999995 788877777
Q ss_pred HHHHHHHHHHHHH---HhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhc
Q 013992 105 ADFLFFVGAVIMA---AAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAF 181 (432)
Q Consensus 105 ~~~~~~~~~~~~~---~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l 181 (432)
-++...++.++++ ..+.+|.+.++|++.|+|.-........++..||..||-+.++|+......+|..+-..+.+++
T Consensus 116 ~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~l 195 (459)
T KOG4686|consen 116 LCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFL 195 (459)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHH
Confidence 6667777777665 4689999999999999999888888889999999999999999999999999998877777766
Q ss_pred cCCCCch-----HHHH---HhhH-HHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHH
Q 013992 182 TRAPGTW-----RWML---GVAG-IPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKE 252 (432)
Q Consensus 182 ~~~~~~w-----r~~f---~~~~-~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (432)
.+..+.. .... .... ..+....+..+-+ .|. +++++..+. .+
T Consensus 196 y~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~l----g~~-----D~rAerilh--------------------~e 246 (459)
T KOG4686|consen 196 YDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSL----GLS-----DDRAERILH--------------------LE 246 (459)
T ss_pred HHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHh----hhh-----hhHHHHHHh--------------------hh
Confidence 6542200 0000 0000 0111111111100 000 011111000 00
Q ss_pred HHHccCccchhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHH
Q 013992 253 IEEEGSSEKINLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVS 332 (432)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (432)
+....+..+.....-++ |.+|...+++++.. ....-+....|.++++..+.++..++...........+..++.
T Consensus 247 ~g~~Ge~pkLtdv~~f~-ppfw~~~iicv~yy-----va~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvf 320 (459)
T KOG4686|consen 247 EGFLGEEPKLTDVNTFY-PPFWVLVIICVLYY-----VAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVF 320 (459)
T ss_pred cCcccCCcccccccccC-ccHHHHHHHHHHHH-----HHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhH
Confidence 00011111111112222 44555444433332 2556666677888888888878877777777777788999999
Q ss_pred HHHHhhhCCchhhHhHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccccccccccccCccchhhhhccCCCCcc
Q 013992 333 IYFIDRTGRKKLLVISLSGVILSLGVLSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCG 412 (432)
Q Consensus 333 g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g 412 (432)
|.++||.|++.+++.+..+..+..=....+....+.....+.++.....+...+ +-+.-.+|++.-++ +.|
T Consensus 321 g~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~lsPy~~m~~lGLsysllAcslW-------P~va~~vpE~qLGT--ayg 391 (459)
T KOG4686|consen 321 GAISDKYGFNLWWVASACILTLLGHSGLFFTFLSPYTSMTFLGLSYSLLACSLW-------PCVASLVPEEQLGT--AYG 391 (459)
T ss_pred HHhHhhhcceehhHHHHHHHHHHHhhhHHhhhccHHHHHHHHhhhHHHHHHHHh-------hhhhhhCCHHHhcc--hHH
Confidence 999999999988877665554433322222222222222222222222111122 22333678899999 999
Q ss_pred ccccccccccc
Q 013992 413 FCASHSNKVKG 423 (432)
Q Consensus 413 ~~~~~~~~~~g 423 (432)
++.+..|....
T Consensus 392 f~qsIqNLgla 402 (459)
T KOG4686|consen 392 FIQSIQNLGLA 402 (459)
T ss_pred HHHHHHhhhhh
Confidence 99999887644
No 102
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.77 E-value=1e-16 Score=150.49 Aligned_cols=285 Identities=13% Similarity=0.092 Sum_probs=182.6
Q ss_pred ceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhc----cccchHHHHHH-HHHHHHHHHHHHH
Q 013992 44 GYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMND----RFGRRTSILVA-DFLFFVGAVIMAA 118 (432)
Q Consensus 44 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d----r~Grr~~l~~~-~~~~~~~~~~~~~ 118 (432)
.+......+.++.+.+++|.+.... +++..+..+...+.+|+.|.++| |+||||.++.+ .+...++.++.++
T Consensus 17 q~~~~l~~~~l~~yl~~lg~~~~~~---~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~ 93 (477)
T TIGR01301 17 QFGWALQLSLLTPYVQELGIPHAWA---SIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGF 93 (477)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHH---HHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHh
Confidence 4445556666777788899988777 99999999999999999999999 59999998874 6666666677777
Q ss_pred hCChh-----------------HHHHHHhhhhccccchhhhHHHHHHhcCCcccc--hhHHHHHHHHHHHHHHHHHHHHh
Q 013992 119 APNPG-----------------ALITGRVFVGLGVGMASMTSPLYISEASPAKIR--GALVSTNGFLITSGQFLSYLINL 179 (432)
Q Consensus 119 ~~~~~-----------------~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R--~~~~~~~~~~~~~g~~i~~~i~~ 179 (432)
+++.. .++++-.+..++.....+...++++|.+|+++| +.+.++.+....+|..+|+.+++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~ 173 (477)
T TIGR01301 94 AADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGA 173 (477)
T ss_pred CchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76643 223333344457777888889999999998865 58999999999999999999998
Q ss_pred hc--cCCC------------CchHHHHHhhHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHH
Q 013992 180 AF--TRAP------------GTWRWMLGVAGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRD 244 (432)
Q Consensus 180 ~l--~~~~------------~~wr~~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (432)
+. .+.. .+.|+.|++.++..++..++ .+..+|.|.... ++..++. ..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~-~~~~~~~------~~----------- 235 (477)
T TIGR01301 174 YSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGS-DDFINSE------AA----------- 235 (477)
T ss_pred HHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCcc-ccchhhh------cc-----------
Confidence 64 1111 14789999988777766665 667788753110 0000000 00
Q ss_pred HHHHhHHHHHHccCccchhHHHhhcc-----cchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHH-cCCCch------h
Q 013992 245 LKESVDKEIEEEGSSEKINLVKLLKT-----RTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQL-SGFASN------R 312 (432)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------~ 312 (432)
+.++.+.....++++++ +..|+.+++.++.++ ++..+..|.+.+..+ ..+.++ +
T Consensus 236 ---------~~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~-----a~f~~~~y~T~~vg~~v~~~~~~~~~~y~ 301 (477)
T TIGR01301 236 ---------PPSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWI-----AWFPFILFDTDWMGREVYGGSVNQGAKYD 301 (477)
T ss_pred ---------cccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHH-----HHHHHHHhccHHHHHHHcCCCCcchhHHH
Confidence 00000001112222222 233443333333333 666666666666653 322211 1
Q ss_pred H----HHHHHHHHHHHHHHHHHHHHHHHhhhCC-chhhHhHHHHHHHHHHHHHHHH
Q 013992 313 T----ALLLSLVTSGLNAAGSIVSIYFIDRTGR-KKLLVISLSGVILSLGVLSAVF 363 (432)
Q Consensus 313 ~----~~~~~~~~~~~~~~~~~~~g~l~d~~~~-~~~~~~~~~~~~~~~~~~~~~~ 363 (432)
+ ..+......+...+.+++..++.+|+|+ |+.+.++.++.++++....+..
T Consensus 302 ~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~ 357 (477)
T TIGR01301 302 DGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVT 357 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHH
Confidence 1 2334444555556667778888999985 6777888888888777776554
No 103
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.77 E-value=9.1e-18 Score=162.00 Aligned_cols=181 Identities=14% Similarity=0.159 Sum_probs=138.2
Q ss_pred cchhhhhhh-hccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHH---HHHhCChhHH
Q 013992 50 ISGALLYIR-DDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVI---MAAAPNPGAL 125 (432)
Q Consensus 50 ~~~~~~~i~-~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~---~~~~~~~~~~ 125 (432)
....+|.+. +++|.+..+. ++..+...++..++.++.|+++||+|||+++..+.++..++.+. ...+++...+
T Consensus 269 ~~~~~p~~l~~~~g~s~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (490)
T PRK10642 269 LLTYMPSYLSHNLHYSEDHG---VLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLI 345 (490)
T ss_pred HHHHHHHHHHHhcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Confidence 444556554 5678776665 66777888899999999999999999999988877654433322 2234567778
Q ss_pred HHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHH
Q 013992 126 ITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFIL 205 (432)
Q Consensus 126 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 205 (432)
++++++.|++.+........++.|.+|++.|+.+++.......++..++|.+.+++.+..++|+..+++..+.+++..+.
T Consensus 346 ~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~ 425 (490)
T PRK10642 346 FAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLIT 425 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Confidence 88899998877777777778889999999999999975444555567888888888775545888777777777777777
Q ss_pred HhhcCCCHHHHHHc-----CCHHHHHHHHHHhC
Q 013992 206 MLLLPESPRWLYRK-----GREEEAQAILRKVY 233 (432)
Q Consensus 206 ~~~~~e~~~~~~~~-----~~~~~~~~~~~~~~ 233 (432)
.+++||+|+|+.++ ++.||+.+.+++++
T Consensus 426 ~~~~pes~~~~~~~~~~~~~~~~~a~~~l~~~~ 458 (490)
T PRK10642 426 GVTMKETANRPLKGATPAASDIQEAKEILVEHY 458 (490)
T ss_pred HHHhccccCCCCCCccccccchhhHHHHhhccc
Confidence 77789999987754 88889888888876
No 104
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.75 E-value=5.3e-17 Score=150.57 Aligned_cols=326 Identities=16% Similarity=0.077 Sum_probs=214.6
Q ss_pred cccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcccc-chHHHHHHHHHHHHHHHHHHHh
Q 013992 41 LLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFG-RRTSILVADFLFFVGAVIMAAA 119 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G-rr~~l~~~~~~~~~~~~~~~~~ 119 (432)
++.....+...|.++...++.|.+..+. |.+.++..+...++++++|.++||++ +||.+.+..++.++........
T Consensus 12 f~~f~~~G~~~p~~~~~L~~~G~s~~qI---G~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~ 88 (400)
T PF03825_consen 12 FLYFFAYGAFLPYLPLYLESRGFSGTQI---GILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFS 88 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344445556777888888899988898 99999999999999999999999986 5677777777777777777888
Q ss_pred CChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHH-HhhccCCCC--chHHHHHhhH
Q 013992 120 PNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLI-NLAFTRAPG--TWRWMLGVAG 196 (432)
Q Consensus 120 ~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i-~~~l~~~~~--~wr~~f~~~~ 196 (432)
++++.+++.-++..+...+..|..-++..+...+ +++-.|-.-...++|.+++... ...+....+ +....+++.+
T Consensus 89 ~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~--~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 166 (400)
T PF03825_consen 89 SSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD--RGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAA 166 (400)
T ss_pred ccHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc--ccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHH
Confidence 8999888888888888888888888888887753 3444455555566666655432 222222211 1334556666
Q ss_pred HHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHH
Q 013992 197 IPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRG 276 (432)
Q Consensus 197 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (432)
...++.....+.+|+.|+ +++ ++++.++....+..+++|+|++...
T Consensus 167 ~~~~ll~~~~l~lp~~~~----~~~------------------------------~~~~~~~~~~~~~~~llk~~~~~~F 212 (400)
T PF03825_consen 167 ILSLLLAGFALFLPKTPP----KRS------------------------------AKESVKKLLGLDALKLLKNPRFLVF 212 (400)
T ss_pred HHHHHHHHHHHhCCCCcc----ccc------------------------------cCCCcccccchHHHHHhcCccHHHH
Confidence 555555555666788752 000 0001111223345689999998765
Q ss_pred HHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHHH
Q 013992 277 LIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILSL 356 (432)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 356 (432)
.+..++... .......+.+.|+++.++.+....+.......+++++.-...+++.+|+|.|+++.++.+..++=.
T Consensus 213 ll~~~l~~~-----~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~ 287 (400)
T PF03825_consen 213 LLAAFLIGI-----SHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRW 287 (400)
T ss_pred HHHHHHHHH-----HHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 554444333 566677788999999986656667777777888999999999999999999999999888877766
Q ss_pred HHHHHHHhccCCCCCccchhc----ccccccccccccccccccCccchhhhhccCCCCccccccc
Q 013992 357 GVLSAVFHETTSHSPMVSAVE----TSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCASH 417 (432)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~~ 417 (432)
.+...... +.+......++ -+....... .....-+...+|++.|++ ++|+-++.
T Consensus 288 ~l~a~~~~--~~~~~~~~~~l~q~lhG~tf~~~~---~a~~~yi~~~~p~~~~at--~Q~l~~~~ 345 (400)
T PF03825_consen 288 LLYAYFSD--PWPFIVALQLLGQLLHGLTFGLFH---AASVRYIDRIAPPELRAT--AQGLYSAL 345 (400)
T ss_pred HHHHHhcC--CcHHHHHHHHHHHhhhhHHHHHHH---HHHHHHHHHhCCccchHH--HHHHHHHH
Confidence 66555422 22211111111 121111111 111122233566699999 88887654
No 105
>PRK09669 putative symporter YagG; Provisional
Probab=99.74 E-value=2.6e-17 Score=156.99 Aligned_cols=259 Identities=15% Similarity=0.083 Sum_probs=167.8
Q ss_pred hhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcc----ccch-HHHHHHHHHHHHHHHHHHHhCC-----
Q 013992 52 GALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDR----FGRR-TSILVADFLFFVGAVIMAAAPN----- 121 (432)
Q Consensus 52 ~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr----~Grr-~~l~~~~~~~~~~~~~~~~~~~----- 121 (432)
...+++.+++|++.... |.+.++..+..++..|+.|.++|| +||| +.++.+.+..+++.++....++
T Consensus 31 ~l~~~~t~~~gls~~~~---g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~ 107 (444)
T PRK09669 31 FLAYFYTDVFGLSAAIM---GTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATG 107 (444)
T ss_pred HHHHHHHHhcCCCHHHH---HHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcch
Confidence 35566778899998888 999999999999999999999998 7875 5555677777777766655543
Q ss_pred -hhHHHHHHhhhhccccchhhhHHHHHHhcC-CcccchhHHHHHHHHHHHHHHHHHHHHhhccCC------CCchHHHHH
Q 013992 122 -PGALITGRVFVGLGVGMASMTSPLYISEAS-PAKIRGALVSTNGFLITSGQFLSYLINLAFTRA------PGTWRWMLG 193 (432)
Q Consensus 122 -~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~------~~~wr~~f~ 193 (432)
...+.+...+.+.+......+..++.+|+. ++++|.+..++......+|..+++.+...+... ..+|+..+.
T Consensus 108 ~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~ 187 (444)
T PRK09669 108 KIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMM 187 (444)
T ss_pred HHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHH
Confidence 344555666667666667777778999998 458899888888877777777766543322211 114888888
Q ss_pred hhHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccc
Q 013992 194 VAGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRT 272 (432)
Q Consensus 194 ~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (432)
+.+++.++..+. ++..+|.++ +. ++++.+.....++.+|||.
T Consensus 188 i~~ii~~v~~~~~~~~~~e~~~----~~---------------------------------~~~~~~~~~~~~~~~~n~~ 230 (444)
T PRK09669 188 VMGLLGVVLFFCCFFMTKERYT----PE---------------------------------VDNSSSVWKDLKLLLGNSQ 230 (444)
T ss_pred HHHHHHHHHHHHHhCCeEEecC----CC---------------------------------CcCCCCHHHHHHHHhCCch
Confidence 887776665554 344444311 00 0011122345677889998
Q ss_pred hhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHH
Q 013992 273 VRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGV 352 (432)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 352 (432)
++...+..++... .........+.|.+...+. +...........+..+++.++.+++.||+|+|+.+..+....
T Consensus 231 ~~~l~~~~~~~~~-----~~~~~~~~~~y~~~~~~~~-~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~ 304 (444)
T PRK09669 231 WRIMFIFNVVLLT-----AVVTRGGATLYYVNYVLLR-PDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAF 304 (444)
T ss_pred HHHHHHHHHHHHH-----HHHHHhhhhheeeeeecCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence 8775544333222 1222222222333333222 334444555556777888899999999999999988876655
Q ss_pred HHHH
Q 013992 353 ILSL 356 (432)
Q Consensus 353 ~~~~ 356 (432)
.+..
T Consensus 305 ~~~~ 308 (444)
T PRK09669 305 VILS 308 (444)
T ss_pred HHHH
Confidence 5433
No 106
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.72 E-value=2.1e-17 Score=157.64 Aligned_cols=356 Identities=12% Similarity=-0.012 Sum_probs=214.2
Q ss_pred HHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcccc-----chHHHHHHHHH
Q 013992 34 FSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFG-----RRTSILVADFL 108 (432)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G-----rr~~l~~~~~~ 108 (432)
.++...++..++.........|.+.+++|.++.+. +...+...+...+-. ++|+++||++ ||+.++++.++
T Consensus 29 ~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i---~~~~sl~~lpw~~K~-l~g~l~D~~~i~G~rRr~~l~~~~~l 104 (468)
T TIGR00788 29 AIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARY---QRLVGLSSLGWALKP-FAGVMSDTFPLFGYTKRWYLVLSGLL 104 (468)
T ss_pred HHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHH---HHHHHHHHHHHHHHH-HHHHHHHhcCCCCccchHHHHHHHHH
Confidence 34444556777774444455666777899999988 888999999998854 4999999998 78878888776
Q ss_pred HH-HHHHHHHHhCChhHHH-HHHhhhhccccchhhhHHHHHHhcCCcccchhHHH---HHHHHHHHHHHHHHHHHhhccC
Q 013992 109 FF-VGAVIMAAAPNPGALI-TGRVFVGLGVGMASMTSPLYISEASPAKIRGALVS---TNGFLITSGQFLSYLINLAFTR 183 (432)
Q Consensus 109 ~~-~~~~~~~~~~~~~~~~-~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~---~~~~~~~~g~~i~~~i~~~l~~ 183 (432)
.+ ++....+..++..... +..++.+++.+...+..-++..|..+ +++....+ .......+|..+++.+++.+.+
T Consensus 105 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~ 183 (468)
T TIGR00788 105 GSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLD 183 (468)
T ss_pred HHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 63 4333334345544444 47889999999999999999999998 55544333 3333445899999999999988
Q ss_pred CCCchHHHHHhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchh
Q 013992 184 APGTWRWMLGVAGIPALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKIN 263 (432)
Q Consensus 184 ~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (432)
..+ ||..|++.+...++..+..++++|++.....+.+.++ .. .. ....... .+..++....
T Consensus 184 ~~~-~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~--~~-------~~-----~~~~~~~----~~~~~~~~~~ 244 (468)
T TIGR00788 184 KTL-TRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYL--EM-------NM-----ALLTLGV----LANVKVQILG 244 (468)
T ss_pred hcC-cchHHHHHHHHHHHHHHHHHhcccccccccccccccc--hh-------hh-----hhhhhhH----HHHHHHHHHH
Confidence 777 9999999888777776667778886310000000000 00 00 0000000 0000111223
Q ss_pred HHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCch
Q 013992 264 LVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKK 343 (432)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 343 (432)
.++.+++|..+...+..++... ..... ....+. +.++..+.++...+......+++.+++....+++.+|++.|+
T Consensus 245 l~~~l~~~~i~~~l~fifl~~~--~~~~~-~~~~f~--~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~ 319 (468)
T TIGR00788 245 LRGAIQLLEIAKPLIFIFLSYA--NLPGA-SGSVFC--ATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRL 319 (468)
T ss_pred HHHHHhcHHHHHHHHHHHHHHh--hcCCC-CceeEE--EEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHH
Confidence 4556777777664443322111 11111 101111 112234566888899988899999999999999999999999
Q ss_pred hhHhHHHHHHHHHHHHHHHHhccC-------CCCCccchhcccccccccccccccccccCccchhhhhccCCCCcccccc
Q 013992 344 LLVISLSGVILSLGVLSAVFHETT-------SHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCAS 416 (432)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~ 416 (432)
.+.++.++..++............ .+......++............. ......+|++.+++ ..|+.++
T Consensus 320 ~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~---~~~~~~~p~~~egt--~~al~~s 394 (468)
T TIGR00788 320 LFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFL---VLLARLCPSGCESS--VFALLAS 394 (468)
T ss_pred HHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHH---HHHHHhCCCCceeh--HHHHHHH
Confidence 988888877776644322211111 11111111122222222222222 22233566699999 8888877
Q ss_pred ccccccc
Q 013992 417 HSNKVKG 423 (432)
Q Consensus 417 ~~~~~~g 423 (432)
..+.+..
T Consensus 395 ~~~lg~~ 401 (468)
T TIGR00788 395 ILHLGSS 401 (468)
T ss_pred HHHHHHH
Confidence 7665433
No 107
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.71 E-value=6.9e-16 Score=145.53 Aligned_cols=164 Identities=15% Similarity=0.235 Sum_probs=126.9
Q ss_pred hhcccceeccccchhhhh-hhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccc-cchHHHHHHHHHHHHHHHHH
Q 013992 39 GGLLFGYDTGVISGALLY-IRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRF-GRRTSILVADFLFFVGAVIM 116 (432)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~ 116 (432)
..+...+....+...+|. +.+++|.++.+. +.+.+.+.....++.+++|+++||+ ||||+++.+.++..++.++.
T Consensus 17 ~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a---~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll 93 (493)
T PRK15462 17 LQIWEYFSFYGMRALLILYLTNQLKYDDNHA---YELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVL 93 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHH
Confidence 334444444444445554 566789988888 8899999999999999999999999 99999999999999998877
Q ss_pred HHhC-ChhHHHHHHhhhhccccchhhhHHHHHHhcCCcc--cchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHH
Q 013992 117 AAAP-NPGALITGRVFVGLGVGMASMTSPLYISEASPAK--IRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLG 193 (432)
Q Consensus 117 ~~~~-~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~ 193 (432)
+..+ +...+.++..+.+++.|...+...++++|.+|++ +|..++++.+...++|..++|.+.+++.+..+ ||+.|.
T Consensus 94 ~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~G-w~~~F~ 172 (493)
T PRK15462 94 GASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYS-WAMGFG 172 (493)
T ss_pred HHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhC-hHHHHH
Confidence 6543 2233444444555666766777788999999976 68999999999999999999999999988777 999999
Q ss_pred hhHHHHHHHHHHH
Q 013992 194 VAGIPALLQFILM 206 (432)
Q Consensus 194 ~~~~~~~~~~~~~ 206 (432)
+.++..++..+.+
T Consensus 173 iaaigm~l~li~~ 185 (493)
T PRK15462 173 LAAVGMIAGLVIF 185 (493)
T ss_pred HHHHHHHHHHHHH
Confidence 8776444444443
No 108
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.71 E-value=6.4e-17 Score=155.35 Aligned_cols=275 Identities=14% Similarity=0.088 Sum_probs=171.5
Q ss_pred ceeccccch-hhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhc----cccc-hHHHHHHHHHHHHHHHHHH
Q 013992 44 GYDTGVISG-ALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMND----RFGR-RTSILVADFLFFVGAVIMA 117 (432)
Q Consensus 44 ~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d----r~Gr-r~~l~~~~~~~~~~~~~~~ 117 (432)
.+......+ ...++.+.+|++.... |.+..+..+..++..|+.|.++| |+|| |+.++.+.+..+++.++..
T Consensus 19 ~~~~~~~~~~l~~yyt~v~Gls~~~v---g~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf 95 (473)
T PRK10429 19 DFAIGIVYMYLMYYYTDVVGLSVGLV---GTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLF 95 (473)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCHHHH---HHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHH
Confidence 333333444 3445666779988777 99999999999999999999999 6698 5566668777777766664
Q ss_pred HhCC------hhHHHHHHhhhhccccchhhhHHHHHHhcC-CcccchhHHHHHHHHHHHHHHHHHHHHhhc----cC--C
Q 013992 118 AAPN------PGALITGRVFVGLGVGMASMTSPLYISEAS-PAKIRGALVSTNGFLITSGQFLSYLINLAF----TR--A 184 (432)
Q Consensus 118 ~~~~------~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l----~~--~ 184 (432)
..++ +..+.+..++.+++......+..++..|.. ++++|.+..++...+..+|..+.+.+...+ .. .
T Consensus 96 ~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~ 175 (473)
T PRK10429 96 SAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDR 175 (473)
T ss_pred cCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCch
Confidence 4332 234455566777788878888889999999 589999998886666666655544433322 11 1
Q ss_pred CCchHHHHHhhHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchh
Q 013992 185 PGTWRWMLGVAGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKIN 263 (432)
Q Consensus 185 ~~~wr~~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (432)
..+|+....+.++..++..+. ++..+|.++. .+. +.+++++.+.+..
T Consensus 176 ~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~----~~~----------------------------~~~~~~~~~~~~~ 223 (473)
T PRK10429 176 GFGFQMFTLVLIAFFIVSTIITLRNVHEVYSS----DNQ----------------------------VSAEGSHLTLKDI 223 (473)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCceecCCc----ccc----------------------------ccccccCCCHHHH
Confidence 113777777777665554444 4445664210 000 0000011112233
Q ss_pred HHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCch
Q 013992 264 LVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKK 343 (432)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 343 (432)
.+.+++||.++..+...++... .......+.+.|.+...+. ....+.......+..+++.++.+++.||+|+|+
T Consensus 224 ~~~~~~n~~~~~ll~~~~~~~~-----~~~~~~~~~~y~~~y~~~~-~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~ 297 (473)
T PRK10429 224 VALIYKNDQLSCLLGMALAYNI-----ASNIINGFAIYYFTYVIGD-ADLFPYYLSYAGAANLVTLILFPRLVKSLSRRI 297 (473)
T ss_pred HHHHhcCHHHHHHHHHHHHHHH-----HHHHHhhheeeEEEEECCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH
Confidence 4456678777654444333322 3333334444454444443 444555656666788999999999999999999
Q ss_pred hhHhHHHHHHHHHHHH
Q 013992 344 LLVISLSGVILSLGVL 359 (432)
Q Consensus 344 ~~~~~~~~~~~~~~~~ 359 (432)
.+..+..+..++.+.+
T Consensus 298 ~~~~~~~~~~~~~~~~ 313 (473)
T PRK10429 298 LWAGASIFPVLSCGVL 313 (473)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9888777666555444
No 109
>PRK09848 glucuronide transporter; Provisional
Probab=99.67 E-value=1.4e-15 Score=145.47 Aligned_cols=263 Identities=13% Similarity=0.070 Sum_probs=161.1
Q ss_pred hhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccc----cchHHH-HHHHHHHHHHHHHHHHhC-----C-
Q 013992 53 ALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRF----GRRTSI-LVADFLFFVGAVIMAAAP-----N- 121 (432)
Q Consensus 53 ~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~----Grr~~l-~~~~~~~~~~~~~~~~~~-----~- 121 (432)
..+++.+.+|++..+. |.+.+...+..++..++.|+++||. ||||.. +.+.+...+..++....+ +
T Consensus 31 l~~y~~~~~gl~~~~~---g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (448)
T PRK09848 31 LLSYYTDVAGVGAAAA---GTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSS 107 (448)
T ss_pred HHHHHHHHcCCCHHHH---HHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcch
Confidence 3456777789988887 9999999999999999999999996 777755 555555554444432111 1
Q ss_pred -hhHHHHHHhhhhccccchhhhHHHHHHhcCCc-ccchhHHHHHHHH-----HHHHHHHHHHHHhhccCCCC-chHHHHH
Q 013992 122 -PGALITGRVFVGLGVGMASMTSPLYISEASPA-KIRGALVSTNGFL-----ITSGQFLSYLINLAFTRAPG-TWRWMLG 193 (432)
Q Consensus 122 -~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~R~~~~~~~~~~-----~~~g~~i~~~i~~~l~~~~~-~wr~~f~ 193 (432)
...+.+...+.+++.+...+...++..|..++ ++|.+..+.-..+ ..++..++|.+.+....... .|.....
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~ 187 (448)
T PRK09848 108 KVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTI 187 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHH
Confidence 12234445667777877777777777776654 6788876665543 33455566666654321111 1222222
Q ss_pred hhHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccc
Q 013992 194 VAGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRT 272 (432)
Q Consensus 194 ~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (432)
+.++..++..+. ....||+++ + ++++...+..+++++|||.
T Consensus 188 ~~~v~~~~~~~~~~~~~~e~~~----~----------------------------------~~~~~~~~~~~~~l~~n~~ 229 (448)
T PRK09848 188 VLAIAGMVLYFICFKSTRENVV----R----------------------------------IVAQPSLKISLQTLKRNRP 229 (448)
T ss_pred HHHHHHHHHHHHHHcCcEeccC----C----------------------------------CccCCCHHHHHHHHhCCch
Confidence 223333222222 333444421 0 0001112234567889999
Q ss_pred hhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHH
Q 013992 273 VRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGV 352 (432)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 352 (432)
++...+..++... .+.......|.|+++..+.++...++......++.+++.++.+++.||+++|+.+.++..+.
T Consensus 230 f~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~ 304 (448)
T PRK09848 230 LFMLCIGALCVLI-----STFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLG 304 (448)
T ss_pred HHHHHHHHHHHHH-----HHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 8765554433332 34445555677777666665555555555556667889999999999999999999988877
Q ss_pred HHHHHHHHH
Q 013992 353 ILSLGVLSA 361 (432)
Q Consensus 353 ~~~~~~~~~ 361 (432)
.++...+.+
T Consensus 305 ~i~~~~~~~ 313 (448)
T PRK09848 305 TCGYLLFFW 313 (448)
T ss_pred HHHHHHHHH
Confidence 777655543
No 110
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.65 E-value=1.1e-15 Score=121.42 Aligned_cols=135 Identities=30% Similarity=0.480 Sum_probs=120.9
Q ss_pred HHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCccc
Q 013992 76 SMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKI 155 (432)
Q Consensus 76 s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 155 (432)
+.+.++..++.++.|++.||+|||+.+..+..+..++.+.....++++.+.+.+++.|++.+...+....++.|.+|+++
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 84 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEE 84 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhh
Confidence 44567788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHH-HhhcCC
Q 013992 156 RGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFIL-MLLLPE 211 (432)
Q Consensus 156 R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~e 211 (432)
|++..++.+....+|..+++.+.+.+.+..+ |++.+++.+...++..+. +++.||
T Consensus 85 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 85 RGVALGLMSAGIALGPLLGPPLGGVLAQFLG-WRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhHHHHHHHHhHHHHHHHhHHhHHHHhcccc-hHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999999988776 999999988777766655 444454
No 111
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.64 E-value=3.7e-14 Score=130.85 Aligned_cols=184 Identities=17% Similarity=0.231 Sum_probs=140.8
Q ss_pred hhHHHHHHHHHHhhcccceeccccchhhhhhhhccc--cchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccc-hHHHH
Q 013992 27 PYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFK--SVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGR-RTSIL 103 (432)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Gr-r~~l~ 103 (432)
+..|+.+.+..+..++.....+++.+..-+..++++ .+.+.. |++.++..++.+++++.+|....|.+. |+.++
T Consensus 30 ~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ff---G~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli 106 (488)
T KOG2325|consen 30 KTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFF---GLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLI 106 (488)
T ss_pred CCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchh---hHHHHHHHHHHHhcchhhcccccccCCcccCHH
Confidence 445666666666777777777766666555556644 444445 999999999999999999999999996 88899
Q ss_pred HHHHHHHHHHHHH-HH---hC-ChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 013992 104 VADFLFFVGAVIM-AA---AP-NPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLIN 178 (432)
Q Consensus 104 ~~~~~~~~~~~~~-~~---~~-~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~ 178 (432)
.|.++..+++++. +. .+ ..+.++++|++.|+|.+ ......+|+++....++|.++++....+..+|.++||.++
T Consensus 107 ~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q 185 (488)
T KOG2325|consen 107 VSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVG-NFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQ 185 (488)
T ss_pred HHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc-cHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHH
Confidence 9999999999988 33 23 57889999999999988 4566779999999999999999999999999999999888
Q ss_pred hhccCCC--C----------chHHHHHhhHHHHHHHHHH-HhhcCCCHH
Q 013992 179 LAFTRAP--G----------TWRWMLGVAGIPALLQFIL-MLLLPESPR 214 (432)
Q Consensus 179 ~~l~~~~--~----------~wr~~f~~~~~~~~~~~~~-~~~~~e~~~ 214 (432)
..+.... | .+...-|+.++..++..+. .+++.|.++
T Consensus 186 ~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 186 LAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred HHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 7765432 1 1233556666666666655 666777643
No 112
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.64 E-value=6.6e-15 Score=132.80 Aligned_cols=201 Identities=9% Similarity=0.024 Sum_probs=147.1
Q ss_pred HHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCC-----------
Q 013992 117 AAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAP----------- 185 (432)
Q Consensus 117 ~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~----------- 185 (432)
+...++..++++-++.|.|.+...+....++++..|+|++++.+++.+..+.+|..++|.+++.+....
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 456789999999999999999999999999999999999999999999999999999999999877321
Q ss_pred ----CchHHHHHhhHHHHHHHHHHHhhc--CCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCc
Q 013992 186 ----GTWRWMLGVAGIPALLQFILMLLL--PESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSS 259 (432)
Q Consensus 186 ----~~wr~~f~~~~~~~~~~~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (432)
.+||+.|++.+...++..+.+.+. ||.++ ++++ +..++
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~------~~~~-----------------------------~~~~~- 128 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE------ADVA-----------------------------RVSSG- 128 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc------cccc-----------------------------ccccc-
Confidence 249999997776655555554444 44311 0000 00000
Q ss_pred cchhHHHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHc--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 013992 260 EKINLVKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLS--GFASNRTALLLSLVTSGLNAAGSIVSIYFID 337 (432)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 337 (432)
+....++.+++|.++. ..+.++++.........|.+.|+.+. .+.++.+.+........+.++|+++.+++.|
T Consensus 129 ~~~~~~~~~~~~~~~l-----~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~ 203 (310)
T TIGR01272 129 DTTQKTSAFQFTHLVL-----GALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMP 203 (310)
T ss_pred cccchhhHHhhHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0011123455555544 22344444446778888999999754 4666888888999999999999999999999
Q ss_pred hhCCchhhHhHHHHHHHHHHH
Q 013992 338 RTGRKKLLVISLSGVILSLGV 358 (432)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~ 358 (432)
|+++|+.+.++..+..++..+
T Consensus 204 r~g~~~~l~~~~~l~~~~~~l 224 (310)
T TIGR01272 204 MISQGRYLAFNAFLAVLLSIG 224 (310)
T ss_pred HhCHHHHHHHHHHHHHHHHHH
Confidence 999999888777666665533
No 113
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.63 E-value=3.9e-17 Score=156.46 Aligned_cols=306 Identities=18% Similarity=0.187 Sum_probs=3.0
Q ss_pred HHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHH
Q 013992 34 FSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGA 113 (432)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 113 (432)
..+++..+.+....+.....+..+.+.|+++..+. |++.+.+-++..+..++..++.+|..|-|.+-+|.+++++++
T Consensus 6 ~~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~---G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~ 82 (539)
T PF03137_consen 6 VFLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQS---GLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGS 82 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHH
Confidence 44555556667777788889999999999999999 999999999999999999999999888889999999999999
Q ss_pred HHHHHhC--------------------------------------------------ChhHHHHHHhhhhccccchhhhH
Q 013992 114 VIMAAAP--------------------------------------------------NPGALITGRVFVGLGVGMASMTS 143 (432)
Q Consensus 114 ~~~~~~~--------------------------------------------------~~~~~~~~r~l~G~~~~~~~~~~ 143 (432)
+++++-+ -+..++++.++.|+|....++..
T Consensus 83 ~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG 162 (539)
T PF03137_consen 83 LLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLG 162 (539)
T ss_dssp ---------------------------------------------------------------------SSS--------
T ss_pred HHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccce
Confidence 8876300 13557889999999999999999
Q ss_pred HHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCC---------------------CchHHHHHhhHHHHHHH
Q 013992 144 PLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAP---------------------GTWRWMLGVAGIPALLQ 202 (432)
Q Consensus 144 ~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~---------------------~~wr~~f~~~~~~~~~~ 202 (432)
.+|+-|..++++-+..+|+......+|.++|.++++.+.+.. |.|-.-|++.+...++.
T Consensus 163 ~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~ 242 (539)
T PF03137_consen 163 ITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLS 242 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998776531 12444566677767777
Q ss_pred HHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHH-hHHHHHHccCccchhHHHhhcccchhHHHHHHH
Q 013992 203 FILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKES-VDKEIEEEGSSEKINLVKLLKTRTVRRGLIAGV 281 (432)
Q Consensus 203 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (432)
.+.++++|+.-+-.. +..++.+...++.... ..+...+. ..+...+..+.-+...+++++||.+....+..
T Consensus 243 aipl~~FPk~lp~~~--~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~- 314 (539)
T PF03137_consen 243 AIPLFFFPKKLPGTS--ERQEEKESSERKEEDS-----DKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAG- 314 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHcCCccCCCcc--cccchhhhhhcchhhh-----hhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHH-
Confidence 777777776632110 0000000000000000 00000000 00000112233455677888888875544433
Q ss_pred HHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHH-HHHHHHHHHHHHHHhhhCC--chhhHhHHHHHHH
Q 013992 282 GLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTS-GLNAAGSIVSIYFIDRTGR--KKLLVISLSGVIL 354 (432)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~~~--~~~~~~~~~~~~~ 354 (432)
........++..|.|.|++.+.+.++..+.++..... .+.++|.+++|++.+|++- |+....+.+...+
T Consensus 315 ----~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v 386 (539)
T PF03137_consen 315 ----VFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIV 386 (539)
T ss_dssp ----------------------------------------------------------------------------
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHH
Confidence 3344467888899999999988777776666654333 3668999999999999753 4444444333333
No 114
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.61 E-value=6.4e-15 Score=141.33 Aligned_cols=305 Identities=15% Similarity=0.180 Sum_probs=219.4
Q ss_pred HHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHH
Q 013992 31 RLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFF 110 (432)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~ 110 (432)
..+.++++..+.+++....+...+..+.+.|+++..+. |++.+.+-++..+...+..+...|.-|-+.+-+|.++++
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~s---G~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~ 173 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQS---GLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMG 173 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcc---eeEeeecccchhhhhHhHHHhccccCccceeeechhHHH
Confidence 34556666777777777888888999999999999888 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHh--------------------C-----------------------------C--h-hHHHHHHhhhhccccc
Q 013992 111 VGAVIMAAA--------------------P-----------------------------N--P-GALITGRVFVGLGVGM 138 (432)
Q Consensus 111 ~~~~~~~~~--------------------~-----------------------------~--~-~~~~~~r~l~G~~~~~ 138 (432)
++++++++- + + + ..++++.++.|+|...
T Consensus 174 lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tp 253 (735)
T KOG3626|consen 174 LGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATP 253 (735)
T ss_pred HHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCC
Confidence 999998741 0 0 2 2567788999999999
Q ss_pred hhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCC------------------CchHHHHHhhHHHHH
Q 013992 139 ASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAP------------------GTWRWMLGVAGIPAL 200 (432)
Q Consensus 139 ~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~------------------~~wr~~f~~~~~~~~ 200 (432)
.++...+|+-|...+++-+..+|+......+|.++|.++++++.... |.|..-|++.+.+.+
T Consensus 254 i~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~ 333 (735)
T KOG3626|consen 254 IFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLL 333 (735)
T ss_pred CccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999876531 136667888888888
Q ss_pred HHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHHHHHH
Q 013992 201 LQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRGLIAG 280 (432)
Q Consensus 201 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (432)
+..+.++++|+..+. ..++.+..+ .+.....++ ....+....++-++-+...+++++||.+...++..
T Consensus 334 ~~a~p~f~fPk~lp~---~~~~~~~~~-~~~~k~~~~--------~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~ 401 (735)
T KOG3626|consen 334 FSAVPLFFFPKELPK---SQKRKRARD-LHVLKTESG--------GAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLAS 401 (735)
T ss_pred HHHHHHHhCcccCcc---ccccchhhh-hcccccccc--------cccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHH
Confidence 888888888876321 111000000 000000000 00000000011123355678889998876544443
Q ss_pred HHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHH-HHHHHHHHHHHHHHHHHHhhhCC--chhhHhHHHHHHHH
Q 013992 281 VGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLS-LVTSGLNAAGSIVSIYFIDRTGR--KKLLVISLSGVILS 355 (432)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~~~--~~~~~~~~~~~~~~ 355 (432)
.+....+.+...|+|.|++.+.+.++..+..+. .+...+..+|.+++|++.+|+.. |.......+...+.
T Consensus 402 -----~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~ 474 (735)
T KOG3626|consen 402 -----VIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLS 474 (735)
T ss_pred -----HHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHH
Confidence 334447788899999999999888888877777 34444568889999999998754 44444433333333
No 115
>PRK11462 putative transporter; Provisional
Probab=99.61 E-value=1.8e-13 Score=130.59 Aligned_cols=255 Identities=13% Similarity=0.037 Sum_probs=163.3
Q ss_pred hhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcc----ccchHHHH-HHHHHHHHHHHHHHHhCC------
Q 013992 53 ALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDR----FGRRTSIL-VADFLFFVGAVIMAAAPN------ 121 (432)
Q Consensus 53 ~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr----~Grr~~l~-~~~~~~~~~~~~~~~~~~------ 121 (432)
...++.+..|++.... |.+..+.-+--++.-|+.|.++|| +||||..+ ++.+..+++.+++...++
T Consensus 32 l~~fyt~~~Gl~~~~~---g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~ 108 (460)
T PRK11462 32 MMFFYTDIFGIPAGFV---GTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGK 108 (460)
T ss_pred HHHHHHHhhCCCHHHH---HHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchH
Confidence 4455667788888887 999999999999999999999995 79876554 576788887776655543
Q ss_pred hhHHHHHHhhhhccccchhhhHHHHHHhcCC-cccchhHHHHHHHHHHHHHHHHHHHHhhccCCC------CchHHHHHh
Q 013992 122 PGALITGRVFVGLGVGMASMTSPLYISEASP-AKIRGALVSTNGFLITSGQFLSYLINLAFTRAP------GTWRWMLGV 194 (432)
Q Consensus 122 ~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~------~~wr~~f~~ 194 (432)
...+.+..++..++......+-.++.+|..+ ++||++..++...+..+|..+++.+...+.... .+|+....+
T Consensus 109 ~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i 188 (460)
T PRK11462 109 MIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAV 188 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHH
Confidence 3345556666788888888888889999988 788999999999998888877766644332221 137777777
Q ss_pred hHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccch
Q 013992 195 AGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTV 273 (432)
Q Consensus 195 ~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (432)
.+++.++...+ +...+|.++ + ++++.+.+...+..++||.+
T Consensus 189 ~~ii~~i~~~i~~~~~kE~~~----~----------------------------------~~~~~~~~~~l~~~~~Nk~~ 230 (460)
T PRK11462 189 LSVVAFMMLAFCFFTTKERVE----A----------------------------------PPTTTSMREDLRDIWQNDQW 230 (460)
T ss_pred HHHHHHHHHHHHHhcceeccC----C----------------------------------CccCCCHHHHHHHHhCChHH
Confidence 77665555544 333444321 0 00011122345667778777
Q ss_pred hHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHH
Q 013992 274 RRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVI 353 (432)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 353 (432)
+......++... ...........|.+...+. +...+.......+..+++.++++++.||+++|+....+..+..
T Consensus 231 ~~l~~~~~~~~~-----~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~ 304 (460)
T PRK11462 231 RIVGLLTIFNIL-----AVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLA 304 (460)
T ss_pred HHHHHHHHHHHH-----HHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 654333222211 2122222222233333333 3334455566677888999999999999999888765444333
Q ss_pred H
Q 013992 354 L 354 (432)
Q Consensus 354 ~ 354 (432)
+
T Consensus 305 ~ 305 (460)
T PRK11462 305 V 305 (460)
T ss_pred H
Confidence 3
No 116
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.61 E-value=2.3e-13 Score=128.87 Aligned_cols=252 Identities=19% Similarity=0.162 Sum_probs=171.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHH-HHHHHHHHHHHHHh-C-ChhHHHHHHhhhhccccchhhhHHHH
Q 013992 70 LQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVA-DFLFFVGAVIMAAA-P-NPGALITGRVFVGLGVGMASMTSPLY 146 (432)
Q Consensus 70 ~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~-~~~~~~~~~~~~~~-~-~~~~~~~~r~l~G~~~~~~~~~~~~~ 146 (432)
..++..++..+..++..|+.|.++|+-|+||.++.. ..+..+++.+..+. + +++...+..++.-++.+.......++
T Consensus 71 ~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~ 150 (477)
T PF11700_consen 71 LWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAY 150 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 336788888888999999999999999977766554 44444556655553 3 34444445555556777778888899
Q ss_pred HHhcCCcccc--------------------------hhHHHHHHHHHHHHHHHHHHHHhhccCCCC-------chHHHHH
Q 013992 147 ISEASPAKIR--------------------------GALVSTNGFLITSGQFLSYLINLAFTRAPG-------TWRWMLG 193 (432)
Q Consensus 147 i~~~~~~~~R--------------------------~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~-------~wr~~f~ 193 (432)
+.|..+++++ ++..+.-.....+|..+...+.-.+....+ +-|..+.
T Consensus 151 LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~ 230 (477)
T PF11700_consen 151 LPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFL 230 (477)
T ss_pred hHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHH
Confidence 9999999888 899998888888888877766655433222 2488888
Q ss_pred hhHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccc
Q 013992 194 VAGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRT 272 (432)
Q Consensus 194 ~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (432)
+.++.-++..+. .+++||.|+....++......... ++-....++.-|.|+
T Consensus 231 ~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~----------------------------~~l~~t~k~~~~~~~ 282 (477)
T PF11700_consen 231 IVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGF----------------------------KRLWRTFKEIRKLRQ 282 (477)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHH----------------------------HHHHHHHHHHHhChH
Confidence 888766555444 777888754100000000000000 001123344444454
Q ss_pred hhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCc--hhhHhHHH
Q 013992 273 VRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRK--KLLVISLS 350 (432)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~--~~~~~~~~ 350 (432)
..+ +++..+....+..++......|.++..+.+..+.....+...+.+++|.++.|++.||+|.| +++.++..
T Consensus 283 ~~~-----fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~ 357 (477)
T PF11700_consen 283 LFL-----FLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLI 357 (477)
T ss_pred HHH-----HHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHH
Confidence 443 34445555568888888999999877777788888888999999999999999999999998 77776665
Q ss_pred HHHH
Q 013992 351 GVIL 354 (432)
Q Consensus 351 ~~~~ 354 (432)
+..+
T Consensus 358 ~~~~ 361 (477)
T PF11700_consen 358 LWII 361 (477)
T ss_pred HHHH
Confidence 5533
No 117
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.60 E-value=1.4e-14 Score=143.22 Aligned_cols=140 Identities=16% Similarity=0.105 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcC
Q 013992 72 ESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEAS 151 (432)
Q Consensus 72 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~ 151 (432)
.+...+..++..++.++.|+++||+|||++++.+.++.+++.++.++.++...+++.+++.|++.+..++...++++|++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34455666888999999999999999999999999999999999999999888888899999888888899999999999
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHHHhhcCCCH
Q 013992 152 PAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFILMLLLPESP 213 (432)
Q Consensus 152 ~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~~ 213 (432)
|+++|++++|+......+|.+++|.+++.+.+. +....|++.++..++..++.+++||+.
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~--~~~~pf~i~a~~lll~~ll~~~LPET~ 737 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVGI--TKAAPILFASAALACGGLLALKLPDTR 737 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 999999999999999999999999999987765 356777777777777777777789873
No 118
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.60 E-value=3.4e-15 Score=140.93 Aligned_cols=161 Identities=13% Similarity=0.114 Sum_probs=129.1
Q ss_pred hhhhhhhhccccchhh-----hHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhC----Ch
Q 013992 52 GALLYIRDDFKSVDRK-----TLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAP----NP 122 (432)
Q Consensus 52 ~~~~~i~~~~~~~~~~-----~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~ 122 (432)
...|...++.+.+... ....+...++..++..++.++.|+++||+|||+++..+.++.+++..+..... ++
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~ 308 (418)
T TIGR00889 229 IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGY 308 (418)
T ss_pred HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhH
Confidence 3345445555543311 12338888999999999999999999999999999999999988877766642 24
Q ss_pred hHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHH-HHHHHHHHHHHHHHhhccCCCC-----chHHHHHhhH
Q 013992 123 GALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNG-FLITSGQFLSYLINLAFTRAPG-----TWRWMLGVAG 196 (432)
Q Consensus 123 ~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~-~~~~~g~~i~~~i~~~l~~~~~-----~wr~~f~~~~ 196 (432)
+.+++.+++.|++.+...+....++.|++|+++|++++++.+ ....+|..+||.+++++.+..+ +|+..|.+.+
T Consensus 309 ~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~ 388 (418)
T TIGR00889 309 ALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFA 388 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHH
Confidence 567778999999999888888899999999999999999997 6788999999999999988642 3999999888
Q ss_pred HHHHHHHHH-HhhcCCC
Q 013992 197 IPALLQFIL-MLLLPES 212 (432)
Q Consensus 197 ~~~~~~~~~-~~~~~e~ 212 (432)
+..++..++ +++++|+
T Consensus 389 ~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 389 GYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHhCCc
Confidence 777666655 6667776
No 119
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.59 E-value=4.8e-14 Score=132.43 Aligned_cols=155 Identities=14% Similarity=0.160 Sum_probs=127.3
Q ss_pred hhhh-hhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHh
Q 013992 52 GALL-YIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRV 130 (432)
Q Consensus 52 ~~~~-~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 130 (432)
...| ++.+++|.+..+. +++.+...++..++.++.|+++||+|||+.+..+.....+........++.+.+++.++
T Consensus 237 ~~~p~~l~~~~~~~~~~~---g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 313 (393)
T PRK15011 237 INMPLFIINELHLPEKLA---GVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQL 313 (393)
T ss_pred HHHHHHHHHHcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 3445 4556788887777 77777777778889999999999999999888777666655555556778888888999
Q ss_pred hhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHHHhhcC
Q 013992 131 FVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFILMLLLP 210 (432)
Q Consensus 131 l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 210 (432)
+.+++.+...+....+..|.+|+ +|+++.++++....+|..+++.+++.+.+..+ |+..|++.+++.++..+..++.|
T Consensus 314 l~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 391 (393)
T PRK15011 314 LNAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWN-YHAVFWFALVMIIATLFCLLRIK 391 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHhhc
Confidence 88888887777777888999986 49999999999999999999999999999776 99999998888888777777776
Q ss_pred C
Q 013992 211 E 211 (432)
Q Consensus 211 e 211 (432)
|
T Consensus 392 ~ 392 (393)
T PRK15011 392 D 392 (393)
T ss_pred C
Confidence 5
No 120
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.59 E-value=1.5e-14 Score=136.63 Aligned_cols=158 Identities=16% Similarity=0.085 Sum_probs=132.8
Q ss_pred chhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHh
Q 013992 51 SGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRV 130 (432)
Q Consensus 51 ~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 130 (432)
....|.+.++.|.+..+. +.+.+...++..++.++.|+++||+|||+.+..+.+...++.++..+.++.+.+.+..+
T Consensus 240 ~~~~p~~~~~~g~s~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (406)
T PRK11551 240 LNWLPSLLVGQGLSRSQA---GLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGF 316 (406)
T ss_pred HHHHHHHHHhCCCChhhh---hHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 344677777888888777 88999999999999999999999999999998887777777777777888888888888
Q ss_pred hhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHHHhhcC
Q 013992 131 FVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFILMLLLP 210 (432)
Q Consensus 131 l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 210 (432)
+.|++.+...+...++..|.+|+++|++..++.+....+|..++|.+.+.+.+..++|...++......++..+..+++.
T Consensus 317 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (406)
T PRK11551 317 AAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLLV 396 (406)
T ss_pred HHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 88988877888888999999999999999999999999999999999999998766577777777766666655544443
Q ss_pred C
Q 013992 211 E 211 (432)
Q Consensus 211 e 211 (432)
+
T Consensus 397 ~ 397 (406)
T PRK11551 397 S 397 (406)
T ss_pred c
Confidence 3
No 121
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.58 E-value=8.7e-15 Score=138.82 Aligned_cols=140 Identities=14% Similarity=0.126 Sum_probs=122.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcC
Q 013992 72 ESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEAS 151 (432)
Q Consensus 72 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~ 151 (432)
+.+.++..++..++.++.|++.||+|||+.+..+.++.+++.++.++++|.+.+++.+++.|++.+...+....++.|.+
T Consensus 265 g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 344 (420)
T PRK09528 265 GYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNF 344 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 88999999999999999999999999999999999999999889999999999999999999988887788888999999
Q ss_pred CcccchhHHHH-HHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHH-HhhcCCC
Q 013992 152 PAKIRGALVST-NGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFIL-MLLLPES 212 (432)
Q Consensus 152 ~~~~R~~~~~~-~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~e~ 212 (432)
|++.|+...+. ++....+|..+++.+.+++.+..+ ||..|...++..++..++ ++.++++
T Consensus 345 ~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G-~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 345 DVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIG-FQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred CccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhC-chHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999887655 567788999999999999999887 999999988777665555 4445444
No 122
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.57 E-value=1.8e-13 Score=124.81 Aligned_cols=276 Identities=17% Similarity=0.138 Sum_probs=170.9
Q ss_pred eeccccchhhhhhhh-ccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHH--HHHH-HHHH--
Q 013992 45 YDTGVISGALLYIRD-DFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFF--VGAV-IMAA-- 118 (432)
Q Consensus 45 ~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~--~~~~-~~~~-- 118 (432)
+..+...+..|...+ +-|++..+. |.+.++..+...+.+|+.|.++||+|.||-++....+.. .+.+ ...+
T Consensus 21 f~~gi~~pF~~iWL~~~~GLs~~~i---G~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~p 97 (412)
T PF01306_consen 21 FIWGIFLPFFPIWLTQVAGLSGTEI---GIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGP 97 (412)
T ss_dssp HHHHHHHHHHHHHHHHHH---HHHH---HHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHccccCCCHHHH---HHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334555566665554 589999999 999999999999999999999999997765554433222 2222 2122
Q ss_pred --hCChh-HHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhh
Q 013992 119 --APNPG-ALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVA 195 (432)
Q Consensus 119 --~~~~~-~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~ 195 (432)
..|.+ ..+++-...|+......|..-+++.++. ++.+.-.|-.-...++|.+++..++|.+.+. +-+..|++.
T Consensus 98 ll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i--~p~~~fwi~ 173 (412)
T PF01306_consen 98 LLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNI--NPNIIFWIA 173 (412)
T ss_dssp HHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeee--CccHHHHHH
Confidence 23433 3445555667666666777777766654 2235556667778889999999999988865 456778876
Q ss_pred HHHHHHHHHHHhhc-CCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchh
Q 013992 196 GIPALLQFILMLLL-PESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVR 274 (432)
Q Consensus 196 ~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (432)
....++..++.++. |+.++.....+ .+..++++.+.++..+++|+|++|
T Consensus 174 s~~~~il~lll~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~l~k~~~fw 223 (412)
T PF01306_consen 174 SAAAIILLLLLLLLKPDVPPQAEVAD------------------------------ALGAKKDKVSLKDVLSLFKMRNFW 223 (412)
T ss_dssp HHHHHHHHHHHHSS---SSSSS-SST------------------------------TSSS------HHHHHHHTTSHHHH
T ss_pred HHHHHHHHHHHHHcCCcCchhhhhhc------------------------------ccccCCCCCcHHHHHHHhcchhHH
Confidence 66555555554443 33321000000 000011111233567899999998
Q ss_pred HHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCC---chhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHH
Q 013992 275 RGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFA---SNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSG 351 (432)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 351 (432)
...+....... .+.......+.|....... ++...|.+.....+.+++...+..++.+|+|.|+.++++..+
T Consensus 224 ~~~l~v~g~~~-----~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i 298 (412)
T PF01306_consen 224 FFVLFVIGVAA-----IYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVI 298 (412)
T ss_dssp HHHHHHHHHHH-----HHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHH-----HHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHH
Confidence 86554443332 3455544556676654433 245577788888888999999999999999999999998887
Q ss_pred HHHHHHHHHHH
Q 013992 352 VILSLGVLSAV 362 (432)
Q Consensus 352 ~~~~~~~~~~~ 362 (432)
+.+=....++.
T Consensus 299 ~~iRi~~~~~~ 309 (412)
T PF01306_consen 299 MAIRIIGSGFA 309 (412)
T ss_dssp HHHHHHHHHT-
T ss_pred HHHHHHHHhhh
Confidence 77766555544
No 123
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.57 E-value=1.4e-13 Score=126.75 Aligned_cols=270 Identities=18% Similarity=0.170 Sum_probs=190.1
Q ss_pred hhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcc----ccchHH-HHHHHHHHHHHHHHHHHhCC------
Q 013992 53 ALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDR----FGRRTS-ILVADFLFFVGAVIMAAAPN------ 121 (432)
Q Consensus 53 ~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr----~Grr~~-l~~~~~~~~~~~~~~~~~~~------ 121 (432)
.+-++.+.+|++.... |.+..+--+--++.-|+.|.++|| +||||. ++.+.+..++.+.++-.+++
T Consensus 35 Ll~fYTdv~Gis~~~a---G~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k 111 (467)
T COG2211 35 LLFFYTDVFGLSAALA---GTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGK 111 (467)
T ss_pred HHHHHhcccCCcHHHH---HHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcc
Confidence 3344667788888887 888888888889999999999995 786654 56677888888888887763
Q ss_pred hhHHHHHHhhhhccccchhhhHHHHHHhcCC-cccchhHHHHHHHHHHHHHHHHHHHHhhccC----C--CCchHHHHHh
Q 013992 122 PGALITGRVFVGLGVGMASMTSPLYISEASP-AKIRGALVSTNGFLITSGQFLSYLINLAFTR----A--PGTWRWMLGV 194 (432)
Q Consensus 122 ~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~----~--~~~wr~~f~~ 194 (432)
.....+...+.+++......+-.++.+|+.+ ++||.+..++-.....+|..+...+...+.. . ..+|+....+
T Consensus 112 ~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~ 191 (467)
T COG2211 112 LIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALV 191 (467)
T ss_pred hHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHH
Confidence 4455667788899998888888899999986 6889999999988888886655444433332 2 1148887777
Q ss_pred hHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccch
Q 013992 195 AGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTV 273 (432)
Q Consensus 195 ~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (432)
.+++..+..+. ++..+|.+. +.. ..++..+.+.+.+....++|+.+
T Consensus 192 ~~vi~~i~~l~~~~~v~ER~~----~~~-----------------------------~~~~~~~~~~~~~~~~~~~Nrp~ 238 (467)
T COG2211 192 LGVIGVILLLFCFFNVKERVV----ETQ-----------------------------PTKTGVKLKLKDSFLLIFKNRPL 238 (467)
T ss_pred HHHHHHHHHHHHHHHhhcccC----ccc-----------------------------cCcccccccHHHHHHHHHccchH
Confidence 77777666655 444555531 000 00000112223344567889888
Q ss_pred hHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHH
Q 013992 274 RRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVI 353 (432)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 353 (432)
+..++..++... +..........|.+...+.+...............+++.++...+.+|+|+|+++.++.++..
T Consensus 239 ~~~l~~~l~~~~-----~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~ 313 (467)
T COG2211 239 LLLLLMNLLLFI-----AFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLA 313 (467)
T ss_pred HHHHHHHHHHHH-----HHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHH
Confidence 775554333332 455555555666666666666777777777777778889999999999999999999999888
Q ss_pred HHHHHHHHHH
Q 013992 354 LSLGVLSAVF 363 (432)
Q Consensus 354 ~~~~~~~~~~ 363 (432)
++.+++.+..
T Consensus 314 i~~~~~~f~~ 323 (467)
T COG2211 314 VGYLLLYFTP 323 (467)
T ss_pred HHHHHHHhhc
Confidence 8887777765
No 124
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.55 E-value=2.5e-14 Score=133.64 Aligned_cols=148 Identities=17% Similarity=0.067 Sum_probs=124.8
Q ss_pred hhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChh--HHHHHH
Q 013992 52 GALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPG--ALITGR 129 (432)
Q Consensus 52 ~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~r 129 (432)
...+++.++++.++.+. +.+.+.+.++..+++++.|++.||+|||+.+..+.++..++.++..+.++.. .+....
T Consensus 226 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (377)
T TIGR00890 226 GLYKPYGQSLGLSDGFL---VLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATV 302 (377)
T ss_pred HHHHHHHHHcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHH
Confidence 34455567788777666 8888999999999999999999999999999999999988888877776433 344567
Q ss_pred hhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHH
Q 013992 130 VFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQF 203 (432)
Q Consensus 130 ~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~ 203 (432)
++.|++.+...+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..+ |++.|++.++..++..
T Consensus 303 ~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 303 ALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIG-FEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhc-hhhHHHHHHHHHHHhc
Confidence 788888887777778899999999999999999999999999999999999998877 9999998887666543
No 125
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.55 E-value=1.4e-12 Score=116.99 Aligned_cols=286 Identities=14% Similarity=0.033 Sum_probs=192.6
Q ss_pred hhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcccc-----chHHHHH-HHHHHHHHHHHHHH-----hC-----
Q 013992 57 IRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFG-----RRTSILV-ADFLFFVGAVIMAA-----AP----- 120 (432)
Q Consensus 57 i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G-----rr~~l~~-~~~~~~~~~~~~~~-----~~----- 120 (432)
+..|++++..-. +.+.+++.+.. ...+.+|+.+|+.+ ||..+++ |..+...+..+..+ +.
T Consensus 6 MIvEL~vpA~lv---~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~ 81 (403)
T PF03209_consen 6 MIVELGVPAWLV---ALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQS 81 (403)
T ss_pred HHHHhccHHHHH---HHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccc
Confidence 456777765555 88888887754 45999999999999 8877665 55555555444433 22
Q ss_pred --Chh----HHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHh
Q 013992 121 --NPG----ALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGV 194 (432)
Q Consensus 121 --~~~----~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~ 194 (432)
+.+ ...+...+.|+|.+...+...++++|..|+|+|+++.++......+|.+++..+.+.+.+.++.-|..-.+
T Consensus 82 ~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~ 161 (403)
T PF03209_consen 82 SGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVI 161 (403)
T ss_pred ccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHH
Confidence 222 23445678899999999999999999999999999999999999999999999999888876644544443
Q ss_pred hHH--HHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccc
Q 013992 195 AGI--PALLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRT 272 (432)
Q Consensus 195 ~~~--~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (432)
... ..+...++..+=.|.+.. +.. ...++++.+....+++++.+|+
T Consensus 162 ~~~a~i~~~l~~ia~wg~E~r~~-----~~~---------------------------~~~~~~~~~f~~a~~~~~~~~~ 209 (403)
T PF03209_consen 162 QGVALIALLLNLIALWGQEPRRS-----RRA---------------------------AAAERPRPPFREAWRQVWASPQ 209 (403)
T ss_pred HHHHHHHHHHHHHHHHhcccCCc-----ccc---------------------------cCCCCCCccHHHHHHHHHhCCC
Confidence 333 222222333333343110 000 0011222333456678888888
Q ss_pred hhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHh-hhCCchhhHhHHHH
Q 013992 273 VRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFID-RTGRKKLLVISLSG 351 (432)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-~~~~~~~~~~~~~~ 351 (432)
.++.....+.... +++.....+-.|-.+..+.+..+...+......+.++|....|++.. |.+++++...+...
T Consensus 210 a~~f~~fl~l~t~-----a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~ 284 (403)
T PF03209_consen 210 ARRFFVFLFLGTL-----AFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLL 284 (403)
T ss_pred hhHHHHHHHHHHH-----HHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHH
Confidence 8775554443333 55555555556666777788888889999999999999999999877 56777777788888
Q ss_pred HHHHHHHHHHHHhccCCCCCccchhccccccc
Q 013992 352 VILSLGVLSAVFHETTSHSPMVSAVETSHFSN 383 (432)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (432)
..+++.++.......+.+.+....+++|+..+
T Consensus 285 ~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G 316 (403)
T PF03209_consen 285 GALAFALIILAGPLGSPWLFRPGVFLLGLGNG 316 (403)
T ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHhhh
Confidence 88887777766655555554444444444433
No 126
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.53 E-value=2.1e-13 Score=125.98 Aligned_cols=165 Identities=25% Similarity=0.362 Sum_probs=144.4
Q ss_pred cccceeccccchhhhhhhhcc-ccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchH-HHHHHHHHHHHHHHHHHH
Q 013992 41 LLFGYDTGVISGALLYIRDDF-KSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRT-SILVADFLFFVGAVIMAA 118 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~-~l~~~~~~~~~~~~~~~~ 118 (432)
+.............|.+.++. |.++.+. +...+...++..++.++.+++.||+|||+ .+..+..+..++.+....
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 261 (352)
T cd06174 185 FLLSFGYYGLLTYLPLYLQEVLGLSAAEA---GLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLAL 261 (352)
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 333444445555666666554 7777777 99999999999999999999999999999 999999999999999999
Q ss_pred hCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHH
Q 013992 119 APNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIP 198 (432)
Q Consensus 119 ~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~ 198 (432)
.++.+...+..++.|++.+...+....++.|..|+++|++.+++.+....+|..+++.+.+.+.+..+ |++.+++.++.
T Consensus 262 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~-~~~~~~~~~~~ 340 (352)
T cd06174 262 APSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGG-YGGVFLILAAL 340 (352)
T ss_pred hccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-cchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998776 99999999988
Q ss_pred HHHHHHHHhhc
Q 013992 199 ALLQFILMLLL 209 (432)
Q Consensus 199 ~~~~~~~~~~~ 209 (432)
.++..+..+++
T Consensus 341 ~~i~~i~~~~~ 351 (352)
T cd06174 341 ALLAALLLLLL 351 (352)
T ss_pred HHHHHHHheec
Confidence 88777765443
No 127
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.52 E-value=1.9e-12 Score=114.19 Aligned_cols=264 Identities=14% Similarity=0.083 Sum_probs=164.5
Q ss_pred cchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHH
Q 013992 50 ISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGR 129 (432)
Q Consensus 50 ~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r 129 (432)
.+|.+..+-+++|.++.+. +.+....+...++..++.|.++||+|||+.-+..+++++++++ +-..+++..++++|
T Consensus 53 QGpY~Y~LY~~yg~~~~qI---a~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GR 128 (354)
T PF05631_consen 53 QGPYLYALYESYGFSEHQI---AILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGR 128 (354)
T ss_pred hcchhHHHHHHcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHH
Confidence 4555666668899999998 9999999999999999999999999999999999999999885 56678999999999
Q ss_pred hhhhccccchhhhHHHH-HHhcCCc----ccchhHHHHHH-HHHHHHHHHHHHHHhhccCCCC-chHHHHHhhHHHHHHH
Q 013992 130 VFVGLGVGMASMTSPLY-ISEASPA----KIRGALVSTNG-FLITSGQFLSYLINLAFTRAPG-TWRWMLGVAGIPALLQ 202 (432)
Q Consensus 130 ~l~G~~~~~~~~~~~~~-i~~~~~~----~~R~~~~~~~~-~~~~~g~~i~~~i~~~l~~~~~-~wr~~f~~~~~~~~~~ 202 (432)
++.|++....+..-.++ +.|+-.. +..+..++... ...++-.+...+++.++.+..+ +-..+|....+..++.
T Consensus 129 vlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~ 208 (354)
T PF05631_consen 129 VLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVA 208 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHH
Confidence 99999999888877765 5665322 22222222222 2222333444455555554433 1367787777666666
Q ss_pred HHHH-hhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHHHHHHH
Q 013992 203 FILM-LLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRGLIAGV 281 (432)
Q Consensus 203 ~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (432)
.++. ...+|... +..+. ++..+.-....+.+.+||+.+..-
T Consensus 209 ~~~I~~~W~ENyg------~~~~~----------------------------~~~~~~~~~a~~~i~~d~ril~LG---- 250 (354)
T PF05631_consen 209 AVLILKTWPENYG------DTSSS----------------------------SSLSGSFREAWRAILSDPRILLLG---- 250 (354)
T ss_pred HHHHHhcccccCC------Ccccc----------------------------cchHHHHHHHHHHHHcCchhHHHH----
Confidence 5553 34456521 00000 000001112345566777764422
Q ss_pred HHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhh-CCchhhHhHHHHHHHHHHH
Q 013992 282 GLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRT-GRKKLLVISLSGVILSLGV 358 (432)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~ 358 (432)
..........+..+..|.|..-. .....--|+++..+.++.++|+.+..++..+. .....+.....+..+++.+
T Consensus 251 ~~qslFE~smy~FVflWtPaL~~---~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~~~~~e~~l~~v~~~aa~~l~~ 325 (354)
T PF05631_consen 251 LIQSLFEGSMYLFVFLWTPALDP---DDEELPLGLIFSSFMVAMMLGSSLFSRLLSKSLRPESLLRYVFAVAAVSLAI 325 (354)
T ss_pred HHHHHHHHHHHHheeeeeceecC---CCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 22334444555666677776652 22233467788878888899998887665543 3333344444444444333
No 128
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.52 E-value=2.3e-13 Score=128.26 Aligned_cols=140 Identities=16% Similarity=0.203 Sum_probs=123.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcC
Q 013992 72 ESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEAS 151 (432)
Q Consensus 72 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~ 151 (432)
++..+.+.++..++.++.|++.||+|||+.+..+..+.+++.++..+.++.+.+++.+++.|++.+...+.......|.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~ 331 (399)
T PRK05122 252 ALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRV 331 (399)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhC
Confidence 55667788888999999999999999999999999988888888888889888888999999999988888878888999
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHHHhhcCCC
Q 013992 152 PAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFILMLLLPES 212 (432)
Q Consensus 152 ~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~ 212 (432)
|+++|+++.++++....+|..+++.+.+.+.+..+ |++.|++.++..++..+..++++++
T Consensus 332 ~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 332 PPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFG-YPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999988877 9999999888877777665555544
No 129
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.51 E-value=2e-13 Score=129.14 Aligned_cols=158 Identities=18% Similarity=0.171 Sum_probs=129.3
Q ss_pred cchhhhhhhhccccchh-hhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHH
Q 013992 50 ISGALLYIRDDFKSVDR-KTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITG 128 (432)
Q Consensus 50 ~~~~~~~i~~~~~~~~~-~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (432)
..+..+....+.+.+.. .....+.+.+...++..++.+..|++.||+|||+.+..+..+..++.+...+.++.+.+.+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (408)
T PRK09874 238 IAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGIL 317 (408)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 33444544444332222 22223666777788888999999999999999999999998888888888888888889999
Q ss_pred HhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHHHhh
Q 013992 129 RVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFILMLL 208 (432)
Q Consensus 129 r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 208 (432)
+++.|++.+...+.....+.+..|+++|++.+++.+....+|..+||.+++.+.+..+ |++.|++.++..++..+..++
T Consensus 318 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g-~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 318 RFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYG-FRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcc-hhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988999999999999999999999999999999999999998887 999999998887777666443
No 130
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.50 E-value=3.4e-13 Score=128.88 Aligned_cols=152 Identities=12% Similarity=0.038 Sum_probs=124.6
Q ss_pred cchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccc--cchHHHHH--HHHHHHHHHHHHHHhCChhHH
Q 013992 50 ISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRF--GRRTSILV--ADFLFFVGAVIMAAAPNPGAL 125 (432)
Q Consensus 50 ~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~--Grr~~l~~--~~~~~~~~~~~~~~~~~~~~~ 125 (432)
....+|.+.+++|.+..+. +++.+...++..+++++.|+++||. ++|+.... +.++.+++.++....++++.+
T Consensus 260 ~~~~l~~~~~~~g~s~~~~---g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~ 336 (455)
T TIGR00892 260 PIIFLVPYAKDKGVDEYEA---AFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGL 336 (455)
T ss_pred hHHHHHHHHHHcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHH
Confidence 3445566667788888777 8899999999999999999999983 44443333 344445555666778899999
Q ss_pred HHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHH
Q 013992 126 ITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFI 204 (432)
Q Consensus 126 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~ 204 (432)
++.+++.|++.+...+...+++.|.+|+++|++.+++++....+|..+||.+++.+.+..++|++.|++.++..++..+
T Consensus 337 ~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 337 VIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998775699999998876655444
No 131
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.50 E-value=4e-13 Score=125.70 Aligned_cols=152 Identities=13% Similarity=0.022 Sum_probs=131.5
Q ss_pred cchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHH
Q 013992 50 ISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGR 129 (432)
Q Consensus 50 ~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r 129 (432)
.....|...+|+|.+.... +.+.+...++..+..++.+++.||+|+|+.+..+.+...+..++.++++|.+.+++.+
T Consensus 224 ~~~~~~~~l~~~g~s~~~~---g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q 300 (382)
T TIGR00902 224 YYGFSAIYWQAAGISASAT---GLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQ 300 (382)
T ss_pred HHHHHHHHHHHCCCCHhHH---HHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHH
Confidence 3445565567789888888 8899999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccccchhhhHHHHHHhcCCcccchhHHHHHH-HHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHHHh
Q 013992 130 VFVGLGVGMASMTSPLYISEASPAKIRGALVSTNG-FLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFILML 207 (432)
Q Consensus 130 ~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~-~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~ 207 (432)
++.|++.+...+....++.+. |+++|++..++++ ....+|..+++.++|++.+..+ + ..|+..+...++..++..
T Consensus 301 ~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g-~-~~~~~~~~~~~~~~~~~~ 376 (382)
T TIGR00902 301 ILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG-A-GTFVFMAIIAAAAFFLIP 376 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998 9999999999976 5678999999999999999886 6 556666666665554433
No 132
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.49 E-value=4e-13 Score=125.56 Aligned_cols=151 Identities=17% Similarity=0.182 Sum_probs=126.0
Q ss_pred hhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhhcc
Q 013992 56 YIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLG 135 (432)
Q Consensus 56 ~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 135 (432)
++.+++|.++.+. +++.+.......++.++.|++.||+|||+++..+.++..+......+.++.+.+.+.+++.|++
T Consensus 225 ~~~~~~g~~~~~~---g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 301 (375)
T TIGR00899 225 LIIHELGLPDKLA---GLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIF 301 (375)
T ss_pred HHHHHcCCCHHHH---HHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456788877776 7777777777778889999999999999999888777666666666677888888889999999
Q ss_pred ccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHHHhhcCC
Q 013992 136 VGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFILMLLLPE 211 (432)
Q Consensus 136 ~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e 211 (432)
.+...+....++.|..|++ |+++.++++....+|..+++.+.+.+.+..+ |+..|++.++..++..+...+++|
T Consensus 302 ~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 302 IGILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWS-YHAVYWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHHHHHheecC
Confidence 8888888888999998865 6799999999999999999999999988877 999999998888777777666554
No 133
>PRK12382 putative transporter; Provisional
Probab=99.49 E-value=5.1e-13 Score=125.61 Aligned_cols=150 Identities=16% Similarity=0.199 Sum_probs=127.3
Q ss_pred hhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHhh
Q 013992 52 GALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVF 131 (432)
Q Consensus 52 ~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 131 (432)
...|...++.+.+. . ++..+.+.++..+++++.|++.||+|||+.+..+..+.+++.++..+.++.+.+.+.+++
T Consensus 237 ~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (392)
T PRK12382 237 TFVSLYFASKGWAM--A---GFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAAL 311 (392)
T ss_pred HHHHHHHHhcCCch--h---HHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 34444445555432 3 556667778888999999999999999999999999999998888888898888889999
Q ss_pred hhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHHHh
Q 013992 132 VGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFILML 207 (432)
Q Consensus 132 ~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~ 207 (432)
.|++.+...+.....+.|.+|+++|+++.++++....+|..+++.+.+++.+..+ |++.|.+.+...++..+..+
T Consensus 312 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 312 TGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFG-YPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred HHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-chHHHHHHHHHHHHHHHHHH
Confidence 9999998888888889999999999999999999999999999999999999887 99999999887777766644
No 134
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.47 E-value=3.2e-11 Score=110.48 Aligned_cols=171 Identities=20% Similarity=0.322 Sum_probs=136.5
Q ss_pred HHHhhcccceeccc-cchhhhhhhhccc----cchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccc-cchHHHHHHHHHH
Q 013992 36 AGIGGLLFGYDTGV-ISGALLYIRDDFK----SVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRF-GRRTSILVADFLF 109 (432)
Q Consensus 36 ~~~~~~~~~~~~~~-~~~~~~~i~~~~~----~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~-Grr~~l~~~~~~~ 109 (432)
++...+..-++.+. -.+..-++..+++ .++.++ .-+.+.|..-.=+..+++|+++||+ |+|+++..|.+++
T Consensus 26 if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A---~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~ 102 (498)
T COG3104 26 IFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHA---TGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILM 102 (498)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhh---HHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Confidence 33444544444332 3344455666666 887777 5555666555556688999999995 9999999999999
Q ss_pred HHHHHHHHHhC--ChhHHHHHHhhhhccccchhhhHHHHHHhcCCccc--chhHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 013992 110 FVGAVIMAAAP--NPGALITGRVFVGLGVGMASMTSPLYISEASPAKI--RGALVSTNGFLITSGQFLSYLINLAFTRAP 185 (432)
Q Consensus 110 ~~~~~~~~~~~--~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~--R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~ 185 (432)
.+|.++.+.+. +...+.++-.+.++|.|..=+...+++.|.+|+++ |-..++++.++.++|..++|++.+++.+..
T Consensus 103 ~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~ 182 (498)
T COG3104 103 AIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINY 182 (498)
T ss_pred HHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhh
Confidence 99999999984 78899999999999999999999999999998644 677888999999999999999999999988
Q ss_pred CchHHHHHhhHHHHHHHHHHHhhcC
Q 013992 186 GTWRWMLGVAGIPALLQFILMLLLP 210 (432)
Q Consensus 186 ~~wr~~f~~~~~~~~~~~~~~~~~~ 210 (432)
+ |...|...++-....++.+...+
T Consensus 183 g-~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 183 G-WHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred C-HHHHHHHHHHHHHHHHHHHHHcc
Confidence 8 99999999887777766655554
No 135
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.46 E-value=1.6e-12 Score=122.11 Aligned_cols=160 Identities=18% Similarity=0.122 Sum_probs=125.9
Q ss_pred ccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhC-ChhHHHH
Q 013992 49 VISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAP-NPGALIT 127 (432)
Q Consensus 49 ~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~~~~ 127 (432)
......|.+.+++|.+..+. +...+.+.++..++.++.|++.||+|||+.+..+..+..++..+....+ +....
T Consensus 223 ~~~~~lp~~l~~~g~s~~~a---g~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-- 297 (393)
T PRK09705 223 SLIAWLPAFYIEIGASAQYS---GSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL-- 297 (393)
T ss_pred HHHHHHHHHHHHcCCChhhh---hHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH--
Confidence 34445666666788888777 8899999999999999999999999999999988888777766554333 22222
Q ss_pred HHhhhhccccchhhhHHHHHHhcCC-cccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHH-
Q 013992 128 GRVFVGLGVGMASMTSPLYISEASP-AKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFIL- 205 (432)
Q Consensus 128 ~r~l~G~~~~~~~~~~~~~i~~~~~-~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~- 205 (432)
.-++.|++.+...+.......+..+ +++|++..++.+....++..++|.+.+++.+..++|+..|++.++.+++..+.
T Consensus 298 ~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 377 (393)
T PRK09705 298 WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIIT 377 (393)
T ss_pred HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Confidence 2345688888788877777777775 57889999999999999999999999999998877999999888777766655
Q ss_pred HhhcCCCH
Q 013992 206 MLLLPESP 213 (432)
Q Consensus 206 ~~~~~e~~ 213 (432)
+.+.||++
T Consensus 378 ~~~~~~~~ 385 (393)
T PRK09705 378 LRFAPARF 385 (393)
T ss_pred HHhccccc
Confidence 55667763
No 136
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.45 E-value=1.2e-12 Score=124.10 Aligned_cols=159 Identities=13% Similarity=0.137 Sum_probs=132.8
Q ss_pred chhhhhhhhc-cccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHH
Q 013992 51 SGALLYIRDD-FKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGR 129 (432)
Q Consensus 51 ~~~~~~i~~~-~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r 129 (432)
....|.+.++ +|.+.... +++.+...++..++.++.+++.||.++++.+..+.++.+++.++..+.++.+...++.
T Consensus 243 ~~~~p~~~~~~~g~~~~~~---g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (417)
T PRK10489 243 RVLYPALADEVWQMGAAQI---GLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCL 319 (417)
T ss_pred HHhhHHHHHhccCCChhHh---HHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 3455666555 88877777 8899999999999999999999998888888888888888888888888888888888
Q ss_pred hhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHH-HHHHhh
Q 013992 130 VFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQ-FILMLL 208 (432)
Q Consensus 130 ~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~-~~~~~~ 208 (432)
++.|++.+...+...+++.|..|++.|+++++++.....+|..+|+.+.+.+.+..+ ++..++..+...++. .+.+..
T Consensus 320 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 398 (417)
T PRK10489 320 ALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMT-PVASASASGFGLLIIGVLLLLV 398 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhc-hhhHHHHHHHHHHHHHHHHHHh
Confidence 999998887777778899999999999999999999999999999999999999877 788887776555444 444666
Q ss_pred cCCCH
Q 013992 209 LPESP 213 (432)
Q Consensus 209 ~~e~~ 213 (432)
++|.+
T Consensus 399 ~~~~~ 403 (417)
T PRK10489 399 LGELR 403 (417)
T ss_pred ccccc
Confidence 67663
No 137
>PRK03545 putative arabinose transporter; Provisional
Probab=99.44 E-value=3.8e-12 Score=119.57 Aligned_cols=150 Identities=13% Similarity=0.126 Sum_probs=120.1
Q ss_pred hhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHH-HHHHhCChhHHHHHHhh
Q 013992 53 ALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAV-IMAAAPNPGALITGRVF 131 (432)
Q Consensus 53 ~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~r~l 131 (432)
..|.+.+++|.+..+. +++.+...++..+++++.|++.||+|||+.. .+..+..++.. +....++.+.+++..++
T Consensus 228 ~~~~l~~~~g~s~~~~---~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l 303 (390)
T PRK03545 228 IEPFVQQVAGLSENFA---TLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAANSEWHLSVLSIF 303 (390)
T ss_pred HHHHHHHhcCCCccHH---HHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHhchHHHHHHHHHH
Confidence 3445566678877777 8888889999999999999999999988754 44444444443 34556778888888899
Q ss_pred hhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHHHhh
Q 013992 132 VGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFILMLL 208 (432)
Q Consensus 132 ~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 208 (432)
.|++.+...+.....+.|..| ++|++++++++....+|..+|+++++.+.+..+ ++..|++.+++.++..+....
T Consensus 304 ~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g-~~~~~~~~~~~~~~~~~~~~~ 378 (390)
T PRK03545 304 WGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLG-LSSIGYVGAALALAALVWSIL 378 (390)
T ss_pred HHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hhHHHHHHHHHHHHHHHHHHH
Confidence 999887777777778888876 578999999999999999999999999999987 999999998887776666433
No 138
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.44 E-value=1.1e-12 Score=122.89 Aligned_cols=355 Identities=15% Similarity=0.127 Sum_probs=203.5
Q ss_pred HHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhH--HHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHH
Q 013992 30 LRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTL--LQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADF 107 (432)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~ 107 (432)
+.......+-.+..++.........+.....++.+..... ..+.......+...+.++..|.++||+|||..+....+
T Consensus 21 ~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~ 100 (463)
T KOG2816|consen 21 RHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLF 100 (463)
T ss_pred hHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHH
Confidence 3444455555566666666666666776666653322211 11222223356778899999999999999999999998
Q ss_pred HHHHHHHHHHHhCChhHHHHHHhhhhccc--cchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 013992 108 LFFVGAVIMAAAPNPGALITGRVFVGLGV--GMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAP 185 (432)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~--~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~ 185 (432)
...+..+...+.. +|.++ +.++.. +.......++++|....++|....++.+.....+..++|.+++.+.+..
T Consensus 101 ~~~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~ 175 (463)
T KOG2816|consen 101 GTILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFL 175 (463)
T ss_pred HHHHhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc
Confidence 8888877776655 33333 444432 3356677788999999999999999999999999999999999998876
Q ss_pred CchHHHHHhhHHHHHHHHHH-HhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhH
Q 013992 186 GTWRWMLGVAGIPALLQFIL-MLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINL 264 (432)
Q Consensus 186 ~~wr~~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (432)
+ .-..|.+.....++..+. ++++||+-.. +.+.+ ...+..... ........+.....
T Consensus 176 ~-~a~~f~ia~~~~~~~~~y~~~~l~Esl~~---~~~~~---~~~~~~~~~---------------~~~~~~~~~~~~~~ 233 (463)
T KOG2816|consen 176 G-IALVFLIAAASGILSLLYMLLFLPESLQE---KERSD---ATLRELTPG---------------SLDSSHVADAFQSL 233 (463)
T ss_pred C-chHHHHHHHHHHHHHHHHHhhccccccCc---ccccc---ccccccCCC---------------cccchhhhhhhhhh
Confidence 6 777888888777776666 7778887320 10000 000000000 00000000000111
Q ss_pred HHhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHH-HHHhhhCCch
Q 013992 265 VKLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSI-YFIDRTGRKK 343 (432)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~d~~~~~~ 343 (432)
.+.-++|......+ ..++..........-..+.|+....+.+..+.+.+.........++.++.. .+...++.|+
T Consensus 234 ~~~~~~r~~l~l~l----~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~ 309 (463)
T KOG2816|consen 234 TKVGPDRLLLLLLL----VAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKR 309 (463)
T ss_pred cccCCCccchHHHH----HHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 11111121211111 111111111111110223455566677788888777777777888887777 6677788888
Q ss_pred hhHhHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccccccccccccCccchhhhhccCCCCccccccccccccc
Q 013992 344 LLVISLSGVILSLGVLSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCASHSNKVKG 423 (432)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~~~~~~~g 423 (432)
....+...-.+......+.... |.... ......+.....+.+.+..+- ....+.++. ..++.+...+...+
T Consensus 310 ~i~lGl~~~~~~~~~~af~~~~---w~~~~-~~v~~~~~~~~~pa~~s~~s~---~v~~~e~g~--v~~~is~i~~l~~~ 380 (463)
T KOG2816|consen 310 LISLGLLSEFLQLLLFAFATET---WMMFA-AGVVVALAGIVFPAIRAFASI---LVSPEEQGK--VFGIISGIEGLSGV 380 (463)
T ss_pred HhhHHHHHHHHHHHHHHHhccc---hhhhH-HHHHHHhhcchhHHHHhHHHh---hcccccccc--hhhHHHHHHHHhhh
Confidence 8888877777777776665433 32222 222222222223222222222 233366777 66666655555444
Q ss_pred c
Q 013992 424 I 424 (432)
Q Consensus 424 ~ 424 (432)
+
T Consensus 381 ~ 381 (463)
T KOG2816|consen 381 V 381 (463)
T ss_pred h
Confidence 3
No 139
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.44 E-value=2e-12 Score=124.31 Aligned_cols=170 Identities=14% Similarity=0.141 Sum_probs=122.6
Q ss_pred HHHhhcccceeccccchhhh-hhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHH
Q 013992 36 AGIGGLLFGYDTGVISGALL-YIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAV 114 (432)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~ 114 (432)
+++..++.+.........+| ++.+++|.+..+. ++..+...++..++.+++|+++||+|||+.++....+..++..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a---~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~ 339 (467)
T PRK09556 263 LCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDA---INTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFT 339 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHH
Confidence 33333443333333445566 4557789988887 8888889999999999999999999999887765544444332
Q ss_pred H--HHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHH-HHHHHHHHHhhccC--------
Q 013992 115 I--MAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITS-GQFLSYLINLAFTR-------- 183 (432)
Q Consensus 115 ~--~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~-g~~i~~~i~~~l~~-------- 183 (432)
+ ....++.....+.+++.|++.............|.+|+++|+.+.|+.+....+ |..++|.+.|.+.+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~ 419 (467)
T PRK09556 340 LGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPI 419 (467)
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccccc
Confidence 2 233456666777888888654333333345677999999999999999888776 77899999999998
Q ss_pred ----CCCchHHHHHhhHHHHHHHHHHHhhc
Q 013992 184 ----APGTWRWMLGVAGIPALLQFILMLLL 209 (432)
Q Consensus 184 ----~~~~wr~~f~~~~~~~~~~~~~~~~~ 209 (432)
..+ |+..|++.++..++..+..+++
T Consensus 420 ~~~~~~~-~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 420 FGYTLTG-WAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred ccccccC-hHHHHHHHHHHHHHHHHHHHHH
Confidence 445 9999998877777766554443
No 140
>PRK03699 putative transporter; Provisional
Probab=99.43 E-value=1.5e-12 Score=122.43 Aligned_cols=158 Identities=16% Similarity=0.071 Sum_probs=130.1
Q ss_pred cchhhhhhh-hccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHH
Q 013992 50 ISGALLYIR-DDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITG 128 (432)
Q Consensus 50 ~~~~~~~i~-~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (432)
+....|.+. +++|.+..+. +.+.+.+.++..++.++.|+++||+|||+.+.....+..+..++....++...+.+.
T Consensus 224 ~~~~~p~~l~~~~g~s~~~~---~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (394)
T PRK03699 224 FISWVPEYAQKKFGMSLEDA---GNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYA 300 (394)
T ss_pred HHHHHHHHHHHHcCCChHHh---hHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHH
Confidence 344556555 6678888887 889999999999999999999999999999988887777777777777888777777
Q ss_pred HhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHHHhh
Q 013992 129 RVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFILMLL 208 (432)
Q Consensus 129 r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 208 (432)
.++.|++.+...+...++..|..|+ ++++..+.......+|..++|.+.+++.+..+ |+..++..++..++..+.+..
T Consensus 301 ~~~~G~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~ 378 (394)
T PRK03699 301 ILGLGFFSSAIYTTIITLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVVTSPIVAHFG-LQAALLTANGLYAVVFVMCIL 378 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhC-chhhhhhhHHHHHHHHHHHHH
Confidence 8889998888888877788887764 46788888888889999999999999999877 999999888877777666666
Q ss_pred cCCC
Q 013992 209 LPES 212 (432)
Q Consensus 209 ~~e~ 212 (432)
+++.
T Consensus 379 ~~~~ 382 (394)
T PRK03699 379 LGFV 382 (394)
T ss_pred HHHH
Confidence 5544
No 141
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.43 E-value=5.2e-13 Score=125.56 Aligned_cols=151 Identities=17% Similarity=0.110 Sum_probs=116.9
Q ss_pred ccccchhhhhhh-hccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHH--HHHHH--hCC
Q 013992 47 TGVISGALLYIR-DDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGA--VIMAA--APN 121 (432)
Q Consensus 47 ~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~--~~~~~--~~~ 121 (432)
........|.+. +++|.+..+. +...+...++..++.++.|+++||+|||+.+..+..+..+.. +...+ .++
T Consensus 235 ~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (394)
T TIGR00883 235 FYLITTYLPTYLTQTLGLSANSA---LLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGS 311 (394)
T ss_pred HHHHHHHHHHHHHHhcCCChhHH---HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 334445556655 6678777777 888888899999999999999999999998876555444333 22222 256
Q ss_pred hhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHH-HHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHH
Q 013992 122 PGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVST-NGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPAL 200 (432)
Q Consensus 122 ~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~-~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~ 200 (432)
.+.+.+..++.|++.+...+...+++.|.+|+++|+++.++ ......+|..++|.+++++.+..+.|++.++..++..+
T Consensus 312 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 312 FTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 67777788889998888889999999999999999999998 45667788999999999999877668888777665444
No 142
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.42 E-value=2.3e-12 Score=120.65 Aligned_cols=151 Identities=15% Similarity=0.156 Sum_probs=122.1
Q ss_pred hhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHhh
Q 013992 52 GALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVF 131 (432)
Q Consensus 52 ~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 131 (432)
..+|.+.++.|.+..+. +...+...++..+++++.|++.||+|+|+++..+..+..++.+... . ........++
T Consensus 221 ~~lp~~~~~~g~s~~~~---g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l 294 (381)
T PRK03633 221 GLMPLYLNHQGMSDASI---GFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFI 294 (381)
T ss_pred HHHHHHHHHcCCCHHHH---HHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHH
Confidence 34676667777777666 8888899999999999999999999999999888888777665443 2 2344456777
Q ss_pred hhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHHHhhc
Q 013992 132 VGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFILMLLL 209 (432)
Q Consensus 132 ~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 209 (432)
.|++.....|...+.+.|..|+++++...+.......+|..+||.+++++.++.+ |++.|.+.+...++..+..+..
T Consensus 295 ~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g-~~~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 295 LGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYS-DNLLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred HHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHhc
Confidence 8887777889998999999998888888888888899999999999999999887 9999998887776665555444
No 143
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.42 E-value=3e-12 Score=120.68 Aligned_cols=156 Identities=12% Similarity=0.023 Sum_probs=119.8
Q ss_pred cccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHH-HHHHHHHHHHHHHHH-----hCC
Q 013992 48 GVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSIL-VADFLFFVGAVIMAA-----APN 121 (432)
Q Consensus 48 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~-~~~~~~~~~~~~~~~-----~~~ 121 (432)
.......|.+.+++|.+..+. +.+.+...++..++.++.|+++||+|||+.+. .+.+..+++.+.... .++
T Consensus 239 ~~~~~~~p~~~~~~g~s~~~~---~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~ 315 (402)
T TIGR00897 239 FGFAVFLPMFVAELGFSTSEW---LQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHS 315 (402)
T ss_pred HHHHHHHHHHHHHcCCChhHH---HHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence 334456677778888887777 88888889999999999999999999998764 333344443333322 246
Q ss_pred hhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHH
Q 013992 122 PGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALL 201 (432)
Q Consensus 122 ~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~ 201 (432)
.+...+..++.|++.+...+. ...+.|..| ++|+++.++.+....+|..++|.+.+.+.+..+ |+..|++.++..++
T Consensus 316 ~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g-~~~~~~~~a~~~~i 392 (402)
T TIGR00897 316 FAVALIIAIALGIFLAGYVPL-AAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFG-AIGVVWIFAALYVV 392 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hHHHHHHHHHHHHH
Confidence 667777888889887766554 456677655 579999999999999999999999999999887 99999998887777
Q ss_pred HHHHHhhc
Q 013992 202 QFILMLLL 209 (432)
Q Consensus 202 ~~~~~~~~ 209 (432)
..++..++
T Consensus 393 ~~~~~~~~ 400 (402)
T TIGR00897 393 SAFLTAFI 400 (402)
T ss_pred HHHHHHHh
Confidence 76665554
No 144
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.42 E-value=6.6e-12 Score=121.43 Aligned_cols=160 Identities=13% Similarity=0.096 Sum_probs=116.2
Q ss_pred ccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHh--CCh-h-H
Q 013992 49 VISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAA--PNP-G-A 124 (432)
Q Consensus 49 ~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~-~-~ 124 (432)
......|.+.+++|.+.... .+......+...++.++.++++||+|||++++.+.++.+++.++.+.. .+. . .
T Consensus 289 ~~~~~~p~i~~~~g~~~~~~---~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~ 365 (479)
T PRK10077 289 VVLYYAPEIFKTLGASTDIA---LLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIV 365 (479)
T ss_pred HHHHHHHHHHHHcCCCCchH---HHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHH
Confidence 34445678888888876666 556666777888999999999999999999999999998888776543 121 1 2
Q ss_pred HHHHHhhhhccccc-hhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhcc------CCCCchHHHHHhhHH
Q 013992 125 LITGRVFVGLGVGM-ASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFT------RAPGTWRWMLGVAGI 197 (432)
Q Consensus 125 ~~~~r~l~G~~~~~-~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~------~~~~~wr~~f~~~~~ 197 (432)
...+.++.+.+.+. ..+....++.|.+|+++|++++++......+|..+++.+.+.+. +..+ |++.|++.++
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~ 444 (479)
T PRK10077 366 ALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFH-NGFSYWIYGC 444 (479)
T ss_pred HHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhcc-CccHHHHHHH
Confidence 22233344443332 23667789999999999999999999999999988866655433 4455 8888888887
Q ss_pred HHHHHHHH-HhhcCCC
Q 013992 198 PALLQFIL-MLLLPES 212 (432)
Q Consensus 198 ~~~~~~~~-~~~~~e~ 212 (432)
.+++..++ +++.||+
T Consensus 445 ~~~~~~~~~~~~~~e~ 460 (479)
T PRK10077 445 MGVLAALFMWKFVPET 460 (479)
T ss_pred HHHHHHHHHHhccccC
Confidence 76666665 4556776
No 145
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.42 E-value=1.7e-12 Score=125.43 Aligned_cols=175 Identities=14% Similarity=0.063 Sum_probs=128.6
Q ss_pred HHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHH
Q 013992 34 FSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGA 113 (432)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 113 (432)
...++..+.............|.+.+++|.+..+. ++......++..++.++.|+++||+|||+.+..+.++..++.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 363 (481)
T TIGR00879 287 LGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHA---FLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICL 363 (481)
T ss_pred HHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHH---HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 33333333333334445556778888888877666 788888888999999999999999999999999988888877
Q ss_pred HHHHH-----hC------ChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhcc
Q 013992 114 VIMAA-----AP------NPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFT 182 (432)
Q Consensus 114 ~~~~~-----~~------~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~ 182 (432)
++.++ .+ +...+....++.+.......+....++.|.+|+++|++++++......+|.++++.+.+.+.
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~ 443 (481)
T TIGR00879 364 FVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTML 443 (481)
T ss_pred HHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76652 11 22222223333332222334566677899999999999999999999999999999999988
Q ss_pred CCCCchHHHHHhhHHHHHHHHHH-HhhcCCC
Q 013992 183 RAPGTWRWMLGVAGIPALLQFIL-MLLLPES 212 (432)
Q Consensus 183 ~~~~~wr~~f~~~~~~~~~~~~~-~~~~~e~ 212 (432)
+..+ |++.|++.++++++..++ +++.||+
T Consensus 444 ~~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~ 473 (481)
T TIGR00879 444 ESIG-VGGVFIFFGGLNVLGLIFVYFFLPET 473 (481)
T ss_pred HhcC-ccceehhHHHHHHHHHHHHheecccC
Confidence 8776 999999988887777666 4556765
No 146
>PRK09952 shikimate transporter; Provisional
Probab=99.41 E-value=4.2e-12 Score=120.95 Aligned_cols=154 Identities=15% Similarity=0.122 Sum_probs=113.2
Q ss_pred hhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHH---hC-ChhHHHHHHhh
Q 013992 56 YIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAA---AP-NPGALITGRVF 131 (432)
Q Consensus 56 ~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~~-~~~~~~~~r~l 131 (432)
++.+++|.+.... ..+.....+...++.++.|+++||+|||++++.+.++..++.+.... .. +...+++..++
T Consensus 276 y~~~~~g~s~~~~---~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 352 (438)
T PRK09952 276 YSTQNLGLPRELF---LNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIML 352 (438)
T ss_pred HHHHhcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHH
Confidence 4556677766544 44444555667788899999999999999998887766555433322 22 34444555677
Q ss_pred hhccccchhhhHHHHHHhcCCcccchhHHHHHH-HHHHHHHHHHHHHHhhccCCC-CchHHHHHhhHHHHHHHHHHHhhc
Q 013992 132 VGLGVGMASMTSPLYISEASPAKIRGALVSTNG-FLITSGQFLSYLINLAFTRAP-GTWRWMLGVAGIPALLQFILMLLL 209 (432)
Q Consensus 132 ~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~-~~~~~g~~i~~~i~~~l~~~~-~~wr~~f~~~~~~~~~~~~~~~~~ 209 (432)
.+++.+...+...+++.|.+|++.|+.+.++.. .+..+|..++|.+.+++.+.. ++|+..+.+.++..++..+..+.+
T Consensus 353 ~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 353 ANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 788888778888899999999999988888844 445588999999999998743 359998888888777777776667
Q ss_pred CCC
Q 013992 210 PES 212 (432)
Q Consensus 210 ~e~ 212 (432)
+|+
T Consensus 433 ~~~ 435 (438)
T PRK09952 433 KDN 435 (438)
T ss_pred ccc
Confidence 665
No 147
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.40 E-value=3.4e-11 Score=107.86 Aligned_cols=305 Identities=14% Similarity=0.036 Sum_probs=195.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHH-HHHHHHHHHHHHhCC--hh-HHHHHHhhhhccccchhhhHHH
Q 013992 70 LQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVAD-FLFFVGAVIMAAAPN--PG-ALITGRVFVGLGVGMASMTSPL 145 (432)
Q Consensus 70 ~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~-~~~~~~~~~~~~~~~--~~-~~~~~r~l~G~~~~~~~~~~~~ 145 (432)
+.+...++..+..++..|+.|.++|+.|+||..+... .+..++..+..+.++ ++ ..++...+..++.........+
T Consensus 59 ~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds 138 (438)
T COG2270 59 YWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDS 138 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhh
Confidence 3488888999999999999999999999777665544 444445555556554 44 4455567788888888888999
Q ss_pred HHHhcCCcccchhHHHHHHHHHHHHHHHHHHHH--hhcc----------------CCCCchHHHHHhhHHHHHHHHHH-H
Q 013992 146 YISEASPAKIRGALVSTNGFLITSGQFLSYLIN--LAFT----------------RAPGTWRWMLGVAGIPALLQFIL-M 206 (432)
Q Consensus 146 ~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~--~~l~----------------~~~~~wr~~f~~~~~~~~~~~~~-~ 206 (432)
++.+..++++-++..+.-.....+|..+.-++. .... +.. +=|..+.+.++..++..+- +
T Consensus 139 ~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~-~~ri~~~l~A~W~li~~iPm~ 217 (438)
T COG2270 139 MLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGE-DVRITGLLAALWWLLFALPMI 217 (438)
T ss_pred HhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccc-cchhHHHHHHHHHHHHHhHHH
Confidence 999999998888887776666666666554442 1111 111 3577888888766665555 5
Q ss_pred hhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHHHHHHHHHHHH
Q 013992 207 LLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRGLIAGVGLQVF 286 (432)
Q Consensus 207 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (432)
+..+|.++- +..+. ....+ .-++-+.+.++..+++++.+ +++..+
T Consensus 218 ~~v~~~~~~---~~~~~-------------------~~l~~--------g~k~L~~t~k~i~~~~~i~~-----FLiA~~ 262 (438)
T COG2270 218 LNVHDAEKI---SSPPP-------------------TALRN--------GFKELKSTFKEIRGRKNLVL-----FLIARF 262 (438)
T ss_pred hcccccccc---cccch-------------------HHHHH--------HHHHHHHHHHHHhcccchHH-----HHHHHH
Confidence 556665420 00000 00000 00111234455666665544 344445
Q ss_pred hhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHHHHHHHHHHhcc
Q 013992 287 QQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILSLGVLSAVFHET 366 (432)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (432)
..-.+..++......|.....+.+..+..+......+.+++|.++.|++.||+|.|+++..+.++..+.++...+...
T Consensus 263 ~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~-- 340 (438)
T COG2270 263 FYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEG-- 340 (438)
T ss_pred HHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccc--
Confidence 555678888888888988777788899999999999999999999999999999999988888877776655444432
Q ss_pred CCCCCccchhcccccccccccccccccccCccchhhhhccCCCCcccccccc
Q 013992 367 TSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCASHS 418 (432)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~~~ 418 (432)
.......+++.+.+.+... ++.-+-....+|++..++ --|+-+...
T Consensus 341 -~~~f~i~gll~g~s~G~~q---A~SRSy~~~lvp~~k~~~--fFglyaltg 386 (438)
T COG2270 341 -ELDFWILGLLVGTSLGGAQ---ASSRSYLARLVPKGKEGR--FFGLYALTG 386 (438)
T ss_pred -cHHHHHHHHHHHHhcchHH---HHHHHHHHHhCCCccccc--eeehhhhhh
Confidence 2223333444444433222 222233333455566666 566554433
No 148
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.40 E-value=4.2e-12 Score=119.38 Aligned_cols=163 Identities=18% Similarity=0.149 Sum_probs=115.7
Q ss_pred hcccceeccccchhhhhh-hhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchH--HHH------HHHHHHH
Q 013992 40 GLLFGYDTGVISGALLYI-RDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRT--SIL------VADFLFF 110 (432)
Q Consensus 40 ~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~--~l~------~~~~~~~ 110 (432)
.+.............|.+ .++++.+..+. +++.+...++..++.++.|+++||+|||+ ... .+.++..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (399)
T TIGR00893 224 QFLVNIGLGFFLTWFPTYLVQERGLSILEA---GFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLS 300 (399)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHhcccHHHh---hHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHH
Confidence 333344444455555654 45677777777 88889999999999999999999999996 111 1111111
Q ss_pred HHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHH
Q 013992 111 VGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRW 190 (432)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~ 190 (432)
+........++.+.......+.+.+.+ ..+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..++|++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~ 379 (399)
T TIGR00893 301 LLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAG 379 (399)
T ss_pred HHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhH
Confidence 111111222344444444445455544 7888889999999999999999999999999999999999999998766999
Q ss_pred HHHhhHHHHHHHHHHH
Q 013992 191 MLGVAGIPALLQFILM 206 (432)
Q Consensus 191 ~f~~~~~~~~~~~~~~ 206 (432)
.|++.++..++..+..
T Consensus 380 ~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 380 ALMVVAALALIGALSY 395 (399)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9998887777666553
No 149
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.38 E-value=1.7e-12 Score=126.15 Aligned_cols=147 Identities=15% Similarity=0.081 Sum_probs=113.1
Q ss_pred chhhhhhh-hccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHh--CChhHHHH
Q 013992 51 SGALLYIR-DDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAA--PNPGALIT 127 (432)
Q Consensus 51 ~~~~~~i~-~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~~ 127 (432)
...+|.+. +++|.+..+. +++.+...++..++.++.|+++||+|||++++.+.++..+..++.... .+.+.+.+
T Consensus 295 ~~~lp~~l~~~~g~~~~~~---g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (496)
T PRK03893 295 QALLPTYLKTDLGYDPHTV---ANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGL 371 (496)
T ss_pred HHHHHHHHHhhcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHH
Confidence 44566665 5888888887 999999999999999999999999999999988877776665544433 23334444
Q ss_pred HHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHH
Q 013992 128 GRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALL 201 (432)
Q Consensus 128 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~ 201 (432)
..++.+.......+....++.|.+|+++|++.+++......+|..++|.+++.+.+..+ |+..+...+....+
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g-~~~~~~~~~~~~~~ 444 (496)
T PRK03893 372 LLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLD-LGTALASLSFSLTF 444 (496)
T ss_pred HHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCC-hHHHHHHHHHHHHH
Confidence 44444433333455666789999999999999999999999999999999999999887 98887665543333
No 150
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.36 E-value=1.4e-11 Score=115.28 Aligned_cols=146 Identities=12% Similarity=0.055 Sum_probs=120.2
Q ss_pred hhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhh
Q 013992 53 ALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFV 132 (432)
Q Consensus 53 ~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 132 (432)
..|...+|.|.+..+. +.+.+...++..+..++.|++.||+|+|+.+..+.+..+++.++.+..++.+.+++..++.
T Consensus 227 ~~~~~~~~~g~s~~~~---g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 303 (382)
T PRK11128 227 FSAIYWQAAGYSASTI---GYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILH 303 (382)
T ss_pred HHHHHHHHCCCCHhHH---HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 3445556788887777 8888888889999999999999999999999999999999888888899999999999999
Q ss_pred hccccchhhhHHHHHHhcCCcccchhHHHHHH-HHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHH
Q 013992 133 GLGVGMASMTSPLYISEASPAKIRGALVSTNG-FLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFI 204 (432)
Q Consensus 133 G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~-~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~ 204 (432)
|++.+...+....++.+. +++++++..+..+ .....|..+|+.++|.+.|..+ + ..|+..+...++.++
T Consensus 304 g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g-~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 304 CGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLG-A-GVFWVMALVALPALF 373 (382)
T ss_pred HHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHHHHHHHHH
Confidence 999998888888888887 5556788888876 5567888999999999999887 6 455555555554433
No 151
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.35 E-value=1.6e-11 Score=119.17 Aligned_cols=164 Identities=16% Similarity=0.125 Sum_probs=108.6
Q ss_pred cchhhhhhhhccccchhhhH--------HHHH-HHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhC
Q 013992 50 ISGALLYIRDDFKSVDRKTL--------LQES-IVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAP 120 (432)
Q Consensus 50 ~~~~~~~i~~~~~~~~~~~~--------~~~~-~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 120 (432)
.....|.+.++.|.+..+.. .... ......++..++.++.++++||+|||++++.+..+.+++.++.++..
T Consensus 307 ~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~ 386 (502)
T TIGR00887 307 VNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAY 386 (502)
T ss_pred cccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 33446777777776543210 0011 23334456667888999999999999999888888777766555431
Q ss_pred ----ChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCC---------c
Q 013992 121 ----NPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPG---------T 187 (432)
Q Consensus 121 ----~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~---------~ 187 (432)
+...+...-+...++.....+....+.+|.+|++.|+++.++.+....+|.++++.+.+.+.+..+ +
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 466 (502)
T TIGR00887 387 NHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIW 466 (502)
T ss_pred HhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcccccccccccccc
Confidence 111111111111222222345666778999999999999999999999999999999998887421 2
Q ss_pred hHHHHHhhHHHHHHHHHHHhhcCCCH
Q 013992 188 WRWMLGVAGIPALLQFILMLLLPESP 213 (432)
Q Consensus 188 wr~~f~~~~~~~~~~~~~~~~~~e~~ 213 (432)
+...|++.++.+++..+..+++||+.
T Consensus 467 ~~~~~~i~~~~~~~~~i~~~~lpEt~ 492 (502)
T TIGR00887 467 MGHVLEIFALFMFLGILFTLLIPETK 492 (502)
T ss_pred chHHHHHHHHHHHHHHHHheEeccCC
Confidence 45677777777776666667789983
No 152
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.34 E-value=6.4e-12 Score=118.66 Aligned_cols=138 Identities=21% Similarity=0.226 Sum_probs=112.5
Q ss_pred hhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHH-HHHHhCChhHHHHHHhhhh
Q 013992 55 LYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAV-IMAAAPNPGALITGRVFVG 133 (432)
Q Consensus 55 ~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~r~l~G 133 (432)
+++.+++|.+..+. +++.+...++..++.++.|++.||+|||+.+..+..+..+..+ .....++.+.+.+..++.|
T Consensus 263 ~~~~~~~g~s~~~~---~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (405)
T TIGR00891 263 TYLKADLGLSPHTV---ANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQ 339 (405)
T ss_pred HHHHHHhCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHH
Confidence 34556788888777 8899999999999999999999999999999888776644333 3334566666777777777
Q ss_pred ccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhh
Q 013992 134 LGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVA 195 (432)
Q Consensus 134 ~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~ 195 (432)
+..+...+....++.|.+|+++|++++++.+....+|..++|++.+++.+..+.|+..+...
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~~ 401 (405)
T TIGR00891 340 MLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALASL 401 (405)
T ss_pred HHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHhh
Confidence 77777777788899999999999999999999999999999999999999877677766543
No 153
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.34 E-value=3.1e-10 Score=103.20 Aligned_cols=306 Identities=11% Similarity=0.043 Sum_probs=187.5
Q ss_pred HHHHHhhcccceeccccchhhhhhhhc-cccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHH
Q 013992 34 FSAGIGGLLFGYDTGVISGALLYIRDD-FKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVG 112 (432)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 112 (432)
..+|+..|+..+ +..-....|++.+. .|.+.++.. .-+.-...-.+....++...+.|..+.|++++.+.+...+.
T Consensus 8 ~llc~~gf~~~f-rPsEPfl~~yL~~~~kn~T~~qv~--~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t 84 (412)
T PF01770_consen 8 LLLCLFGFFKEF-RPSEPFLTPYLTGPDKNFTEEQVN--NEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIIT 84 (412)
T ss_pred HHHHHHHHHHhc-CCCCccchHHHcCCccCCCHHHHH--HhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 344443344432 23344455666655 677777663 34555555667788889999999999999999999999999
Q ss_pred HHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCC-chHHH
Q 013992 113 AVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPG-TWRWM 191 (432)
Q Consensus 113 ~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~-~wr~~ 191 (432)
..+.-+.++...+-+..++.|++.+. ..+-.+++-...|+++-.++.+...+...+|..++.+++..+....+ +.+..
T Consensus 85 ~~lll~~~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L 163 (412)
T PF01770_consen 85 WLLLLFGTSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQL 163 (412)
T ss_pred HHHHHHHCcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH
Confidence 99999999999999999999998874 66677888888888888999999999999999999999988877432 46677
Q ss_pred HHhhHHHHHHHHHHHhhcCCCHHHHHHcCCHHHHHHHH-HHhCCCCchHHHHHHHHHH---hHHHHHHccCccchhHHHh
Q 013992 192 LGVAGIPALLQFILMLLLPESPRWLYRKGREEEAQAIL-RKVYPAHEVETEIRDLKES---VDKEIEEEGSSEKINLVKL 267 (432)
Q Consensus 192 f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 267 (432)
.++......++.+..+++|..++...-+++.++..... .+....++..+......+. ........-..-..+.++.
T Consensus 164 ~~isl~~~~~a~~~~~fLP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~ 243 (412)
T PF01770_consen 164 NYISLASVSLALLIALFLPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSC 243 (412)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHH
Confidence 77766666666777788887665322222211111000 0000000000000000000 0000000001123455667
Q ss_pred hcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHc--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhh
Q 013992 268 LKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLS--GFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLL 345 (432)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 345 (432)
.++|.+++-.++..+. .+++..+..|.-..-++. .......-|..-....+.+.++.+..|++..++.+..-+
T Consensus 244 y~~~~ll~WSlWWa~a-----tcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l 318 (412)
T PF01770_consen 244 YSNPRLLLWSLWWAFA-----TCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGEL 318 (412)
T ss_pred hcCchHHHHHHHHHHH-----HhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHH
Confidence 7788776644444333 335555555554444444 222334455666666777788888889885555554333
Q ss_pred HhH
Q 013992 346 VIS 348 (432)
Q Consensus 346 ~~~ 348 (432)
.++
T Consensus 319 ~l~ 321 (412)
T PF01770_consen 319 ALG 321 (412)
T ss_pred HHH
Confidence 333
No 154
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.34 E-value=4.3e-12 Score=117.98 Aligned_cols=131 Identities=15% Similarity=0.209 Sum_probs=116.2
Q ss_pred hhhhhhhhc-cccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCC-hhHHHHHH
Q 013992 52 GALLYIRDD-FKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPN-PGALITGR 129 (432)
Q Consensus 52 ~~~~~i~~~-~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~r 129 (432)
...|.+.++ +|.+..+. +.+.+...++..++.++.+++.||+|||+.+..+..+.+++.++..+.++ .+.+.+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHY---GWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLW 308 (365)
T ss_pred HHhHHHHHHHhCCchHHH---HHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHH
Confidence 456666655 78877777 88999999999999999999999999999999888888888888887774 88888899
Q ss_pred hhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 013992 130 VFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAP 185 (432)
Q Consensus 130 ~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~ 185 (432)
++.|++.+...+...+++.|..|+++|++..++.+....+|..+++.+.+.+.+..
T Consensus 309 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 309 FAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999887653
No 155
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.33 E-value=4.4e-11 Score=113.45 Aligned_cols=162 Identities=21% Similarity=0.253 Sum_probs=141.5
Q ss_pred cccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccch--HHHHHHHHHHHHHHHHHHH-------
Q 013992 48 GVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRR--TSILVADFLFFVGAVIMAA------- 118 (432)
Q Consensus 48 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr--~~l~~~~~~~~~~~~~~~~------- 118 (432)
+++.....+..+++|.+..+. ..+.-+..+...+|++++|++.||+|.| ++++.+++++.+..+...+
T Consensus 299 ti~~~~~i~a~~~lg~s~~~l---~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~ 375 (477)
T PF11700_consen 299 TIISFAGIYATEVLGMSTTQL---IVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFF 375 (477)
T ss_pred HHHHHHHHHHHHhcCcCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 335555556677999998887 6666677778889999999999999999 8999998888777666665
Q ss_pred -hCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHH
Q 013992 119 -APNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGI 197 (432)
Q Consensus 119 -~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~ 197 (432)
.++.+.+.+.-++.|++.|..++...++.+|..|+++.+..+|++....-....+||++.+.+.+..++-|+.+....+
T Consensus 376 g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~ 455 (477)
T PF11700_consen 376 GLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLV 455 (477)
T ss_pred CcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH
Confidence 6788899999999999999999999999999999999999999999999999999999999999988889999999888
Q ss_pred HHHHHHHHHhhcCCC
Q 013992 198 PALLQFILMLLLPES 212 (432)
Q Consensus 198 ~~~~~~~~~~~~~e~ 212 (432)
+.++.++++++++++
T Consensus 456 lf~~gl~ll~~v~~~ 470 (477)
T PF11700_consen 456 LFLIGLILLFFVDVE 470 (477)
T ss_pred HHHHHHHHHhhccch
Confidence 888888888777654
No 156
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.33 E-value=1.2e-10 Score=112.33 Aligned_cols=156 Identities=14% Similarity=0.152 Sum_probs=120.7
Q ss_pred hhhhhhhccccchhhhHHHHHHHH-HHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHH---HHh-CChhHHHH
Q 013992 53 ALLYIRDDFKSVDRKTLLQESIVS-MAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIM---AAA-PNPGALIT 127 (432)
Q Consensus 53 ~~~~i~~~~~~~~~~~~~~~~~~s-~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~~~~ 127 (432)
..|++.+++|.+..+. ++... ...++..++.++.|+++||+|+|+.+..+.++.+++.+.. +.. ++...+.+
T Consensus 245 ~~~~l~~~~G~s~~~~---g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~ 321 (491)
T PRK11010 245 TTTFLIRGVGFDAGEV---GLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGA 321 (491)
T ss_pred HHHHHHHhcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHH
Confidence 3455566788888888 88874 5567999999999999999999998877666555544322 333 35555555
Q ss_pred HHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHHHh
Q 013992 128 GRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFILML 207 (432)
Q Consensus 128 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~ 207 (432)
.-+++.++.+...+...++..+..+++.++...++.+....+|..+++.+.|++.+..+ |+..|.+.++.+++..+...
T Consensus 322 ~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G-~~~~f~~~~~~~l~~l~~~~ 400 (491)
T PRK11010 322 AVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHG-WPTFYLFSVAAAVPGLLLLL 400 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHH
Confidence 56666666666667778889999999999999999999999999988889999999877 99999999988888877766
Q ss_pred hcCCC
Q 013992 208 LLPES 212 (432)
Q Consensus 208 ~~~e~ 212 (432)
.++++
T Consensus 401 ~~~~~ 405 (491)
T PRK11010 401 VCRQT 405 (491)
T ss_pred HHHhc
Confidence 65543
No 157
>TIGR00895 2A0115 benzoate transport.
Probab=99.31 E-value=2e-11 Score=115.02 Aligned_cols=132 Identities=16% Similarity=0.123 Sum_probs=107.9
Q ss_pred ccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHH
Q 013992 47 TGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALI 126 (432)
Q Consensus 47 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~ 126 (432)
........|.+.+++|.+..+. +...+...++..++.++.|++.||+|||+.+....+......++....++.+...
T Consensus 266 ~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (398)
T TIGR00895 266 VYFLTNWLPKLMVELGFSLSLA---ATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLL 342 (398)
T ss_pred HHHHHHHHHHHHHHcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHH
Confidence 3344556678888888887777 8889999999999999999999999999555444443333333333366777888
Q ss_pred HHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhc
Q 013992 127 TGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAF 181 (432)
Q Consensus 127 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l 181 (432)
+..++.|++.+...+...+++.|.+|+++|++++++......+|..++|.+.+++
T Consensus 343 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 343 LLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 8889999999999999999999999999999999999999999999999999875
No 158
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.31 E-value=2e-11 Score=116.89 Aligned_cols=157 Identities=19% Similarity=0.145 Sum_probs=106.6
Q ss_pred ccchhhhhhhh-ccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccc--cchHHH-HHHHHHHHHHHHHHHH--hCCh
Q 013992 49 VISGALLYIRD-DFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRF--GRRTSI-LVADFLFFVGAVIMAA--APNP 122 (432)
Q Consensus 49 ~~~~~~~~i~~-~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~--Grr~~l-~~~~~~~~~~~~~~~~--~~~~ 122 (432)
.....+|.+.+ +.|.+..+. +.....+.++..++.++.|+++||+ |||+.. +....+..++.++... ..+.
T Consensus 271 ~~~~~~P~~l~~~~g~s~~~~---~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~ 347 (452)
T PRK11273 271 GILDWSPTYLKEVKHFALDKS---SWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNP 347 (452)
T ss_pred HHHHHHHHHHHHhcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccCh
Confidence 34456666554 467777666 7788888889999999999999999 555432 2222333333332222 2344
Q ss_pred hHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHH-HHHHHHhhccCCCCchHHHHHhhHHHHHH
Q 013992 123 GALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQF-LSYLINLAFTRAPGTWRWMLGVAGIPALL 201 (432)
Q Consensus 123 ~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~-i~~~i~~~l~~~~~~wr~~f~~~~~~~~~ 201 (432)
....+..++.|.+..........+..|.+|+++|++++++.+....+|.. .+|.+.+.+.+..+ |+..|++.+..+++
T Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g-~~~~f~~~~~~~~~ 426 (452)
T PRK11273 348 TVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGSIL 426 (452)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc-chHHHHHHHHHHHH
Confidence 44444555555543322233345678999999999999999888777765 47999999999887 99999988887777
Q ss_pred HHHHHhhc
Q 013992 202 QFILMLLL 209 (432)
Q Consensus 202 ~~~~~~~~ 209 (432)
..+....+
T Consensus 427 ~~~~~~~~ 434 (452)
T PRK11273 427 AVILLIVV 434 (452)
T ss_pred HHHHHHHH
Confidence 76664433
No 159
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.30 E-value=1.3e-10 Score=108.36 Aligned_cols=161 Identities=16% Similarity=0.110 Sum_probs=120.0
Q ss_pred ccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhC----Ch
Q 013992 47 TGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAP----NP 122 (432)
Q Consensus 47 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~ 122 (432)
...+......+.++-|.+.++. .+..........+..+++..+.||+|||+.++.+..++.+..++..... ..
T Consensus 286 i~ai~~Yst~i~~~aG~~~~~a---~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~ 362 (485)
T KOG0569|consen 286 INAIFFYSTSIFKTAGFTPEEA---QYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSF 362 (485)
T ss_pred cceeHHHHHHHHHHcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444555566778888888888 7777888888899999999999999999999999999988887765431 11
Q ss_pred --h---HHHHHHhhhhccccc-hhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhH
Q 013992 123 --G---ALITGRVFVGLGVGM-ASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAG 196 (432)
Q Consensus 123 --~---~~~~~r~l~G~~~~~-~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~ 196 (432)
| ..+++.++..++.+. ..|...-+.+|.+|++.|+.++++......+...+-...-..+.+..|+ +.|+...
T Consensus 363 ~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~--~~filF~ 440 (485)
T KOG0569|consen 363 GSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP--YVFILFV 440 (485)
T ss_pred hhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--hhhHHHH
Confidence 1 122333333332222 3577888999999999999999998888888887777766666666664 7777777
Q ss_pred HHHHHHHHH-HhhcCCC
Q 013992 197 IPALLQFIL-MLLLPES 212 (432)
Q Consensus 197 ~~~~~~~~~-~~~~~e~ 212 (432)
+++++..+. +..+|||
T Consensus 441 i~~~~~~i~~~~~lPET 457 (485)
T KOG0569|consen 441 IPLAIFLIYLYRYLPET 457 (485)
T ss_pred HHHHHHHHHHHHhCccc
Confidence 777666555 8889999
No 160
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.30 E-value=3.5e-11 Score=113.29 Aligned_cols=133 Identities=12% Similarity=0.102 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcC
Q 013992 72 ESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEAS 151 (432)
Q Consensus 72 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~ 151 (432)
+.+.+...+...++.++.|++.||+|||+.+.++.++.++...+...++|.+.+++.+++.|++..........+..+..
T Consensus 257 g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 336 (396)
T TIGR00882 257 GYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQF 336 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 88888888888999999999999999999999999999998888788899999999999999987766666667788888
Q ss_pred CcccchhHHHH-HHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHH
Q 013992 152 PAKIRGALVST-NGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFIL 205 (432)
Q Consensus 152 ~~~~R~~~~~~-~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 205 (432)
+++.|+...+. .+....+|..+++.+++++.+..+ |+..|.+.++..++..+.
T Consensus 337 ~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G-~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 337 DVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIG-FQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred CcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcc-cHHHHHHHHHHHHHHHHH
Confidence 88888776665 667889999999999999999877 999999988877666554
No 161
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.30 E-value=3.1e-11 Score=115.29 Aligned_cols=115 Identities=18% Similarity=0.249 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHhhhhccccchhhhHHHHHHhc
Q 013992 72 ESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAA-PNPGALITGRVFVGLGVGMASMTSPLYISEA 150 (432)
Q Consensus 72 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~ 150 (432)
+++.+...++..++.+++++++||+|+|+++..+..+..++.++..+. ++.+.+.+..++.|++.+...+...++++|.
T Consensus 260 ~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 339 (437)
T TIGR00792 260 SYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADT 339 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 667777889999999999999999999999999998888887777665 4566777788889999998888888999888
Q ss_pred CC-------cccchhHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 013992 151 SP-------AKIRGALVSTNGFLITSGQFLSYLINLAFTRAPG 186 (432)
Q Consensus 151 ~~-------~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~ 186 (432)
.+ ++++|.+.++.+....+|..+++.+.+.+.+..+
T Consensus 340 ~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 340 VDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIG 382 (437)
T ss_pred hhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 65 4557999999999999999999999998876543
No 162
>PRK10504 putative transporter; Provisional
Probab=99.29 E-value=3.2e-11 Score=116.37 Aligned_cols=135 Identities=10% Similarity=-0.023 Sum_probs=109.0
Q ss_pred cccchhhhhhhh-ccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHh---CChh
Q 013992 48 GVISGALLYIRD-DFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAA---PNPG 123 (432)
Q Consensus 48 ~~~~~~~~~i~~-~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---~~~~ 123 (432)
.......|++.+ .+|.+..+. +++.....++..++.++.|++.||+|||+++..+..+..++..+..+. ++.+
T Consensus 278 ~~~~~~~~~~~~~~~g~~~~~~---g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (471)
T PRK10504 278 GMLPFMTPVFLQIGLGFSPFHA---GLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYY 354 (471)
T ss_pred HHHHHHHHHHHHHHcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHH
Confidence 334455666555 477777666 888888888888888999999999999999999988888877766553 3344
Q ss_pred HHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 013992 124 ALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAP 185 (432)
Q Consensus 124 ~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~ 185 (432)
.+.+..++.|++.+...+....++.+..|+++|+.+.++.+....+|..+|+.+.+.+.+..
T Consensus 355 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~ 416 (471)
T PRK10504 355 LLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLF 416 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44556778888888888888899999999999999999999999999999999998876644
No 163
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.28 E-value=9.8e-11 Score=111.46 Aligned_cols=137 Identities=15% Similarity=0.150 Sum_probs=101.5
Q ss_pred chhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHh
Q 013992 51 SGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRV 130 (432)
Q Consensus 51 ~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 130 (432)
...+|.+.++.|.+..+. +...+...++..++.++.|++.||+|||+.+..+.++..+..+.....++.....+.-+
T Consensus 251 ~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (426)
T PRK12307 251 FGLLPTYLAGEGFDTGVV---SNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGAC 327 (426)
T ss_pred HHHHHHHHHHcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHH
Confidence 345666666777776666 88888889999999999999999999999998888777666555444332222222222
Q ss_pred hhhc--cccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHH
Q 013992 131 FVGL--GVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWM 191 (432)
Q Consensus 131 l~G~--~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~ 191 (432)
+.|+ +.....+....++.|.+|+++|++++|+......+|..++|.+.+++.+..+ +...
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g-~~~~ 389 (426)
T PRK12307 328 LFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMG-LGAA 389 (426)
T ss_pred HHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHccc-HHHH
Confidence 3332 2233345556778999999999999999999999999999999999998776 5543
No 164
>TIGR00898 2A0119 cation transport protein.
Probab=99.26 E-value=4.9e-11 Score=116.13 Aligned_cols=134 Identities=23% Similarity=0.192 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCCh--hHHHHHHhhhhccccchhhhHHHHHHhcCCc
Q 013992 76 SMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNP--GALITGRVFVGLGVGMASMTSPLYISEASPA 153 (432)
Q Consensus 76 s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 153 (432)
....+...++.++.+++.||+|||+.+..+.++.+++.++..+.++. +...+..++.+++.+...+....+..|.+|+
T Consensus 362 ~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~ 441 (505)
T TIGR00898 362 FISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPT 441 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccH
Confidence 34456677888899999999999999999999999988888777654 4455556666777777788888999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHHHhhcCCC
Q 013992 154 KIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFILMLLLPES 212 (432)
Q Consensus 154 ~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~ 212 (432)
+.|+.++++.+....+|.+++|.+.+ +.+. ++...+++.+...++..+..+++||+
T Consensus 442 ~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~lpet 497 (505)
T TIGR00898 442 VVRNLGVGVCSTMARVGSIISPFLVY-LGEK--WLFLPLVLFGGLALLAGILTLFLPET 497 (505)
T ss_pred HHHhhhHhHHHHHHHHHHHHHhHHHH-HHHH--HHhhHHHHHHHHHHHHHHHHHcCcCC
Confidence 99999999999999999999999988 4433 36677778787777777777788987
No 165
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.24 E-value=8.1e-11 Score=112.88 Aligned_cols=152 Identities=20% Similarity=0.234 Sum_probs=134.2
Q ss_pred cchhhhhhh-hccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHH
Q 013992 50 ISGALLYIR-DDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITG 128 (432)
Q Consensus 50 ~~~~~~~i~-~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (432)
+...+|.+. +++|.+.... |++.+.+.+|..++.++.+++.+|+++++.+..+.++++++.+..+++++.+...+.
T Consensus 237 ~~aLlPl~a~~~l~~~a~~y---Gll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~ 313 (524)
T PF05977_consen 237 VWALLPLFARDVLGGGASGY---GLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIA 313 (524)
T ss_pred HHHhhhHHHHHHhCCcHHHH---HHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 345577765 4577777777 999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHH
Q 013992 129 RVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFIL 205 (432)
Q Consensus 129 r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 205 (432)
.++.|++.........+.+.+..|++.|||.++++......+..+|..+.|.+.+..+ -+..+.+.++..++..++
T Consensus 314 l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g-~~~al~~a~~~lll~~~~ 389 (524)
T PF05977_consen 314 LFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFG-VRTALLIAGAALLLSALI 389 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHH
Confidence 9999999988888888999999999999999999999999999999999999999887 888888777655554444
No 166
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.24 E-value=6.6e-11 Score=112.70 Aligned_cols=156 Identities=21% Similarity=0.151 Sum_probs=106.1
Q ss_pred cccchhhhhhh-hccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccc--cch-HHHHHHHHHHHHHHHHHH--HhCC
Q 013992 48 GVISGALLYIR-DDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRF--GRR-TSILVADFLFFVGAVIMA--AAPN 121 (432)
Q Consensus 48 ~~~~~~~~~i~-~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~--Grr-~~l~~~~~~~~~~~~~~~--~~~~ 121 (432)
......+|.+. +++|.+..+. +...+.+.++..++.++.|+++||+ ++| +......+...+...... ...+
T Consensus 260 ~~~~~~~p~~l~~~~g~s~~~a---~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (434)
T PRK11663 260 AAINDWGNLYMSETLGVDLVTA---NSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFAS 336 (434)
T ss_pred HHHHHHHHHHHHhccCCCHHHH---HHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHccccc
Confidence 33444555554 6678888877 8888999999999999999999999 333 322221111111111111 1223
Q ss_pred hhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHH
Q 013992 122 PGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALL 201 (432)
Q Consensus 122 ~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~ 201 (432)
.....+..+..|++.............|.+|+++|++++++.+....+|..++|.+.+++.+..+ |+..|++.++..++
T Consensus 337 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g-~~~~f~~~~~~~~~ 415 (434)
T PRK11663 337 YVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWH-WTGFFVVISIAAGI 415 (434)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcc-cHHHHHHHHHHHHH
Confidence 33333344444543322222334567899999999999999999999999999999999999887 99999998887777
Q ss_pred HHHHHh
Q 013992 202 QFILML 207 (432)
Q Consensus 202 ~~~~~~ 207 (432)
..+..+
T Consensus 416 ~~~~~~ 421 (434)
T PRK11663 416 SALLLL 421 (434)
T ss_pred HHHHHH
Confidence 665543
No 167
>PRK10054 putative transporter; Provisional
Probab=99.23 E-value=8.8e-11 Score=110.30 Aligned_cols=140 Identities=11% Similarity=0.073 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHhhhhccccchhhhHHHHHHhc
Q 013992 72 ESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAA-PNPGALITGRVFVGLGVGMASMTSPLYISEA 150 (432)
Q Consensus 72 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~ 150 (432)
+.+.+.+.+.....+++.|++.||+++|+.+..+..+..++.....+. ++.+.+++..++.|++.+...|....++.+.
T Consensus 247 g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~ 326 (395)
T PRK10054 247 AVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHI 326 (395)
T ss_pred HHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 777777777777888899999999999999999988888888777664 5677777888999999988888888899999
Q ss_pred CCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHH-HhhcCCCH
Q 013992 151 SPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFIL-MLLLPESP 213 (432)
Q Consensus 151 ~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~e~~ 213 (432)
.|++.|+++.+..+ ...+|..+||.+++.+.|+.+ ....|++.+....+..++ ....+|+|
T Consensus 327 ~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (395)
T PRK10054 327 APPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLP-PWSLFVILALAIVAAWLLMLKGMRARP 388 (395)
T ss_pred CCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcC-hhhHHHHHHHHHHHHHHHHHhccccCc
Confidence 99999999988655 455899999999999999887 777777766555444444 33344443
No 168
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.23 E-value=1.7e-10 Score=109.91 Aligned_cols=157 Identities=18% Similarity=0.119 Sum_probs=99.3
Q ss_pred chhhhhh-hhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHH--H--hCChhHH
Q 013992 51 SGALLYI-RDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMA--A--APNPGAL 125 (432)
Q Consensus 51 ~~~~~~i-~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~--~--~~~~~~~ 125 (432)
...+|.+ .+++|.+..+. +...++..++..+++++.|+++||+|||+.++.+.++..+...... . .++....
T Consensus 263 ~~~lp~~l~~~~g~s~~~~---~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (432)
T PRK10406 263 TTYMQKYLVNTAGMHANVA---SGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAA 339 (432)
T ss_pred HHHHHHHHHHhcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH
Confidence 3445554 45678777666 7777887788888899999999999999988776665443332221 1 2233322
Q ss_pred HHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHH-HHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHH
Q 013992 126 ITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITS-GQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFI 204 (432)
Q Consensus 126 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~-g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~ 204 (432)
+..-.+.+++.+...+....++.|++|++.|+.++|+.+....+ .....|.+.+.+.. .+.|...+++.++..++..+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~-~g~~~~~~~~~~~~~~i~~~ 418 (432)
T PRK10406 340 FGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKS-IGMETAFFWYVTLMAVVAFL 418 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHH-hCCCcHHHHHHHHHHHHHHH
Confidence 22222222333334455667889999999999999997755443 33347777776543 34476677766666666665
Q ss_pred HHhhcCC
Q 013992 205 LMLLLPE 211 (432)
Q Consensus 205 ~~~~~~e 211 (432)
..+++++
T Consensus 419 ~~~~l~~ 425 (432)
T PRK10406 419 VSLMLHR 425 (432)
T ss_pred HHHHhhh
Confidence 5555443
No 169
>PRK15075 citrate-proton symporter; Provisional
Probab=99.23 E-value=2.2e-10 Score=109.21 Aligned_cols=135 Identities=18% Similarity=0.168 Sum_probs=96.9
Q ss_pred ccchhhhhhhh-ccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHH-H---HHhCChh
Q 013992 49 VISGALLYIRD-DFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVI-M---AAAPNPG 123 (432)
Q Consensus 49 ~~~~~~~~i~~-~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~-~---~~~~~~~ 123 (432)
......|.+.+ .+|.+..+. ++....+.++..++.++.|+++||+|||++++.+..+..+.... . ...+++.
T Consensus 256 ~~~~~~p~~l~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (434)
T PRK15075 256 LITVYTPTFGKTVLHLSAADS---LLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFA 332 (434)
T ss_pred HHHHHHHHHHHHhcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchH
Confidence 34455666554 478877776 77888888889999999999999999999988765544332211 1 1223444
Q ss_pred HHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHH-HHHHHHHHHHHHHHhhccCCCC
Q 013992 124 ALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNG-FLITSGQFLSYLINLAFTRAPG 186 (432)
Q Consensus 124 ~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~-~~~~~g~~i~~~i~~~l~~~~~ 186 (432)
...+...+.|++.+...+....++.|.+|+++|+.+.++.. .+..++..++|.+.+++.+..+
T Consensus 333 ~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 333 RMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence 44444556666666666667788999999999999999854 4444557789999999988766
No 170
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.22 E-value=6.6e-11 Score=112.91 Aligned_cols=176 Identities=16% Similarity=0.146 Sum_probs=158.0
Q ss_pred HHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcccc--chHHHHHHHHHH
Q 013992 32 LAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFG--RRTSILVADFLF 109 (432)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G--rr~~l~~~~~~~ 109 (432)
.+....+...+..+........+|...++.+.++.+. +.+.++..+...++.+..|.++|+.. ++.+..++.+..
T Consensus 299 ~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~a---a~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 299 KFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDA---AFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIA 375 (509)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhh---HHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHH
Confidence 4555556666667777777888899999999999888 99999999999999999999999998 556778888899
Q ss_pred HHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchH
Q 013992 110 FVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWR 189 (432)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr 189 (432)
+++.+.+.+.++++.++..-.+.|++.|.........+.|..+.++-+.+.|+.....+++..+||++.+++.|..++|.
T Consensus 376 gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~ 455 (509)
T KOG2504|consen 376 GLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYD 455 (509)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCee
Confidence 99999999999999999999999999999988888899999999999999999999999999999999999999988899
Q ss_pred HHHHhhHHHHHHHHHHHhhcC
Q 013992 190 WMLGVAGIPALLQFILMLLLP 210 (432)
Q Consensus 190 ~~f~~~~~~~~~~~~~~~~~~ 210 (432)
..|+..++..++....++..+
T Consensus 456 ~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 456 HAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eehhhcChHHHHHHHHHHHhH
Confidence 999999998888887777766
No 171
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.22 E-value=5e-10 Score=95.91 Aligned_cols=177 Identities=17% Similarity=0.127 Sum_probs=133.3
Q ss_pred HHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHH
Q 013992 29 VLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFL 108 (432)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~ 108 (432)
||..+......+...+ ....++..-|++.+.+|.+..+. ..+.+.-.+|..+ .++.|.+.||+|+|.++.+|.+.
T Consensus 1 rW~~l~a~~~v~~~~G-t~Y~Fs~yS~~Lk~~l~~sq~~l---~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~ 75 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSG-TTYTFSAYSPQLKSRLGYSQSQL---NTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVL 75 (250)
T ss_pred ChhhHHHHHHHHHhcC-cccchhhhhHHHHHHhCCCHHHH---HHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHH
Confidence 3555555555555554 44557788899999999999998 8888888888876 48899999999999999999999
Q ss_pred HHHHHHHHHHh-------CChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhc
Q 013992 109 FFVGAVIMAAA-------PNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAF 181 (432)
Q Consensus 109 ~~~~~~~~~~~-------~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l 181 (432)
..+|..+...+ .++|.+.+..++.|.+.+.....+.....+.||. +||.+.++.-...+++..+-..+...+
T Consensus 76 ~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~ 154 (250)
T PF06813_consen 76 GFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAF 154 (250)
T ss_pred HHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHH
Confidence 99998876542 3677888788888888777777777777889985 699999999999999888777766666
Q ss_pred cCCCCchHHHHHhhHHHHHHHHHHHhhcCCC
Q 013992 182 TRAPGTWRWMLGVAGIPALLQFILMLLLPES 212 (432)
Q Consensus 182 ~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~ 212 (432)
.+... -+..+.....+.++.++..+++++.
T Consensus 155 f~~~~-~~fll~la~~~~~v~l~~~~~vr~~ 184 (250)
T PF06813_consen 155 FGDDP-SSFLLFLAVLPAVVCLVAMFFVRPV 184 (250)
T ss_pred cCCCh-HHHHHHHHHHHHHHHHHHhhheecc
Confidence 55532 4555444445555555555555444
No 172
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.21 E-value=1.3e-10 Score=109.19 Aligned_cols=148 Identities=16% Similarity=0.073 Sum_probs=111.4
Q ss_pred hhhhhhccccchhhhHHHHHHHHHHH-HHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHH------hCChhHHH
Q 013992 54 LLYIRDDFKSVDRKTLLQESIVSMAV-AGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAA------APNPGALI 126 (432)
Q Consensus 54 ~~~i~~~~~~~~~~~~~~~~~~s~~~-~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~------~~~~~~~~ 126 (432)
.+.+.+|.|.+.++. +++..... ....++.++.|++.||+|+|+.+..+..+.++..+.... .++.....
T Consensus 231 ~~~~l~~~G~s~~~i---g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (390)
T TIGR02718 231 SKLYLVDAGWPLEWI---GRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAW 307 (390)
T ss_pred hhHHHHhcCCCHHHH---HHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHH
Confidence 345556688888887 88877765 466677899999999999999998877666443332221 12334444
Q ss_pred HHHhhhhccccchhhhHHHHHHhcCCc-ccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHH
Q 013992 127 TGRVFVGLGVGMASMTSPLYISEASPA-KIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFIL 205 (432)
Q Consensus 127 ~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 205 (432)
....+.+++.+...+.......+..++ ++|++.++..+....+|..++|.+++.+.+..+ |+..|+..++..++..+.
T Consensus 308 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G-~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 308 SCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFG-YAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHHHHH
Confidence 555666677777777777787777776 788999999999999999999999999998877 999998887766665443
No 173
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.21 E-value=3.7e-10 Score=101.97 Aligned_cols=130 Identities=13% Similarity=0.041 Sum_probs=105.6
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhhccccchh
Q 013992 61 FKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMAS 140 (432)
Q Consensus 61 ~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~ 140 (432)
+|.++.+. +...+.+..+..++.++.+++.||+|+|+++..+..+..++.++....++... ...-++.|++.+..+
T Consensus 173 ~g~s~~~a---~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~~~s~i~ 248 (310)
T TIGR01272 173 LGLPEDQA---AHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWFVLALGLFNSIMF 248 (310)
T ss_pred CCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHH
Confidence 68888888 99999999999999999999999999999998888888887766666555433 345668899999999
Q ss_pred hhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHH
Q 013992 141 MTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGI 197 (432)
Q Consensus 141 ~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~ 197 (432)
|...+...+..|++ .+.+.++. ....+|..+.|.+.|.+.|..+ .+..|++..+
T Consensus 249 P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g-~~~a~~v~~~ 302 (310)
T TIGR01272 249 PTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLG-IQLAFALPVP 302 (310)
T ss_pred HHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhcc-chHHHHHHHH
Confidence 99999998988765 45566665 4566899999999999999776 7888774443
No 174
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.20 E-value=4.6e-10 Score=101.69 Aligned_cols=157 Identities=16% Similarity=0.127 Sum_probs=128.7
Q ss_pred ccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHh-CChhHH
Q 013992 47 TGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAA-PNPGAL 125 (432)
Q Consensus 47 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~ 125 (432)
...++.+-|.+.+..|.+.+.. +++.-.+.++..+|..+.|+++|| +.|+.+.....+..+..+...+. ++.+..
T Consensus 228 F~~ftYi~P~L~~v~g~s~~~v---s~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~ 303 (394)
T COG2814 228 FALYTYIRPFLESVAGFSVSAV---SLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALA 303 (394)
T ss_pred hhhHHhHHHHHHHccCCCHhHH---HHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHH
Confidence 4456677788888889988888 999999999999999999999999 99999999888888777776665 455566
Q ss_pred HHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHH
Q 013992 126 ITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFIL 205 (432)
Q Consensus 126 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 205 (432)
++.-++.|+..+........-+++ .-++.+..+.+++....++|..+|..+++.+.++.+ +....++.++..++..++
T Consensus 304 ~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g-~~~~~~~~a~l~~~a~~~ 381 (394)
T COG2814 304 LALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALG-YAATGWVGAALLLLALLL 381 (394)
T ss_pred HHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hHHHHHHHHHHHHHHHHH
Confidence 666677777766655555555666 335679999999999999999999999999999977 999999999888887777
Q ss_pred Hhhc
Q 013992 206 MLLL 209 (432)
Q Consensus 206 ~~~~ 209 (432)
.+..
T Consensus 382 ~~~~ 385 (394)
T COG2814 382 ALLS 385 (394)
T ss_pred HHHH
Confidence 5443
No 175
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.19 E-value=2.1e-10 Score=102.92 Aligned_cols=176 Identities=17% Similarity=0.215 Sum_probs=148.3
Q ss_pred HHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHH
Q 013992 33 AFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVG 112 (432)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 112 (432)
.+++.-..+.++.+. .++....+-..++|++..+. .++.....+..+++++++|+|.||+|.|+++..+++++.+.
T Consensus 256 ~FLiA~~~~~DGv~t-il~~~~~fg~~~~gls~~~l---ll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~ 331 (438)
T COG2270 256 LFLIARFFYIDGVNT-ILAMGGVFGAADLGLSSTEL---LLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIA 331 (438)
T ss_pred HHHHHHHHHHhhHHH-HHHHHHHHHHHHcCccHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHH
Confidence 333334444555433 23334444556899999888 77777777888899999999999999999999999999999
Q ss_pred HHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHH
Q 013992 113 AVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWML 192 (432)
Q Consensus 113 ~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f 192 (432)
++..-+...-..+.++-.+.|.+.|..+..+.++..+..|+++-++.+|+++...-.....||.+-+.+.+..++-|..+
T Consensus 332 ~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~ 411 (438)
T COG2270 332 ALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGV 411 (438)
T ss_pred HHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHH
Confidence 99888888877788888999999999999999999999999999999999999999999999999999999888899998
Q ss_pred HhhHHHHHHHHHHHhhcCCC
Q 013992 193 GVAGIPALLQFILMLLLPES 212 (432)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~e~ 212 (432)
....++..+..++++.+|+.
T Consensus 412 ~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 412 LSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHHHhhHhhEEeecCC
Confidence 88888888888887877765
No 176
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.18 E-value=3.3e-10 Score=105.47 Aligned_cols=169 Identities=18% Similarity=0.212 Sum_probs=129.7
Q ss_pred cccceeccccchhhhhhhhccc-cchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHh
Q 013992 41 LLFGYDTGVISGALLYIRDDFK-SVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAA 119 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 119 (432)
++.+.....+....+...++.| .+.... +.+.+...++-.+.-.+.+++..|+|.|+++.++.+.+.+=..+.+..
T Consensus 217 ~l~~~~~~~~~~f~~~yl~~~gg~~~~~~---g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~ 293 (400)
T PF03825_consen 217 FLIGISHAAYYTFFSIYLQELGGYSGSTI---GILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYF 293 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccchhhHH---HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444444445555566667776 444555 667777778888888999999999999999999999999988888887
Q ss_pred -CChhHHHHH----HhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHH-HHHHHHHHHHHHHhhccCCCC-----ch
Q 013992 120 -PNPGALITG----RVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGF-LITSGQFLSYLINLAFTRAPG-----TW 188 (432)
Q Consensus 120 -~~~~~~~~~----r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~-~~~~g~~i~~~i~~~l~~~~~-----~w 188 (432)
++.+...+. ..++|+..+........++.+..|++.|+++.++++. ..++|..+|..++|++.+..+ .|
T Consensus 294 ~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~ 373 (400)
T PF03825_consen 294 SDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDW 373 (400)
T ss_pred cCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhH
Confidence 555443333 4569999999999999999999999999999999876 478999999999999998754 25
Q ss_pred HHHHHhhHHHHHHHHHH-HhhcCCC
Q 013992 189 RWMLGVAGIPALLQFIL-MLLLPES 212 (432)
Q Consensus 189 r~~f~~~~~~~~~~~~~-~~~~~e~ 212 (432)
...+.+.+...++..++ +++++|+
T Consensus 374 ~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 374 SAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCC
Confidence 56666666666555555 4555554
No 177
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.18 E-value=4.8e-11 Score=114.78 Aligned_cols=150 Identities=16% Similarity=0.123 Sum_probs=103.6
Q ss_pred hhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccch-------HHHHHHHHHHHHHHHHHHHhCChhHHHH
Q 013992 55 LYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRR-------TSILVADFLFFVGAVIMAAAPNPGALIT 127 (432)
Q Consensus 55 ~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr-------~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (432)
+++.+++|.+..+. +.+.+++.++..++.++.|+++||+||| .......++.++..++....++.+...+
T Consensus 277 ~~l~~~~g~s~~~a---~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~ 353 (476)
T PLN00028 277 EYFYDRFGLSLETA---GAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIV 353 (476)
T ss_pred HHHHHhcCCCHHHH---HHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHH
Confidence 34456788888887 8899999999999999999999999875 2333333344444444455566655555
Q ss_pred HHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHHHh
Q 013992 128 GRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFILML 207 (432)
Q Consensus 128 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~ 207 (432)
.-++.+++.+...+...+++.+..| ++|+...++...+..+|..+++.+.+ ..+. ++|+..|++.+++.++..++.+
T Consensus 354 ~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~-~~y~~~f~~~~~~~~i~~~~~~ 430 (476)
T PLN00028 354 VMILFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-TGSS-YSTETGISLMGVMIIACTLPVA 430 (476)
T ss_pred HHHHHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-hcCC-ccHhhHHHHHHHHHHHHHHHHH
Confidence 5566666555555555556666654 67999999987777777777776543 1122 2499999999888877777766
Q ss_pred hcC
Q 013992 208 LLP 210 (432)
Q Consensus 208 ~~~ 210 (432)
+++
T Consensus 431 ~~~ 433 (476)
T PLN00028 431 FIH 433 (476)
T ss_pred hee
Confidence 664
No 178
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.17 E-value=2.2e-10 Score=106.21 Aligned_cols=136 Identities=21% Similarity=0.137 Sum_probs=107.1
Q ss_pred cchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccc-cchHHHHHHHHHHHHHHHHHHHhCChhHHHHH
Q 013992 50 ISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRF-GRRTSILVADFLFFVGAVIMAAAPNPGALITG 128 (432)
Q Consensus 50 ~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (432)
....+|.+.++.|.+..+. +.+.+...++..+++++.|++.||+ +||+.+..+..+..++.+...+.++..... .
T Consensus 216 ~~~~lp~~~~~~g~~~~~~---g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 291 (355)
T TIGR00896 216 LIGWLPAILISHGASAATA---GSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-W 291 (355)
T ss_pred HHHHHHHHHHHcCCCHHHH---HHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-H
Confidence 3445677777788877777 8999999999999999999999999 567777788888888777777665543332 4
Q ss_pred HhhhhccccchhhhHHHHHHhcCC-cccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchH
Q 013992 129 RVFVGLGVGMASMTSPLYISEASP-AKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWR 189 (432)
Q Consensus 129 r~l~G~~~~~~~~~~~~~i~~~~~-~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr 189 (432)
-++.|++.+...+...+.+.+..+ +++++...++.+....+|..++|.+.+++.++.++|.
T Consensus 292 ~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~~ 353 (355)
T TIGR00896 292 ALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNWL 353 (355)
T ss_pred HHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 567899999888887777766555 5667888898888888899999999999998776554
No 179
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.16 E-value=4.5e-10 Score=105.17 Aligned_cols=151 Identities=13% Similarity=0.128 Sum_probs=110.1
Q ss_pred hhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHH-HhCChhHHHHHHhh
Q 013992 53 ALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMA-AAPNPGALITGRVF 131 (432)
Q Consensus 53 ~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~r~l 131 (432)
..|.+.+.+|.+..+. +++.+...++..++.++.|++.||+|+|+.+..+..+.+++.++.. ..++.+...+..++
T Consensus 222 ~~~~~~~~~g~s~~~~---~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 298 (382)
T PRK10091 222 IKPYMMFISGFSETSM---TFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFI 298 (382)
T ss_pred HHHHHHHhcCCCHHHH---HHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 3455666678887777 8999999999999999999999999999999998888888776554 35555666666666
Q ss_pred hhccccchhhhHHH-HHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHHHhh
Q 013992 132 VGLGVGMASMTSPL-YISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFILMLL 208 (432)
Q Consensus 132 ~G~~~~~~~~~~~~-~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 208 (432)
.+++.....+.... ...+..+++.++... ......+|..+||.+++++.+..++|++.+.+.++.+++.......
T Consensus 299 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (382)
T PRK10091 299 CCAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLL 374 (382)
T ss_pred HHHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHH
Confidence 66655444444333 344444445455443 3567789999999999999986545999999988776666555333
No 180
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.15 E-value=1.7e-10 Score=109.03 Aligned_cols=154 Identities=14% Similarity=0.050 Sum_probs=104.8
Q ss_pred cceeccccchhhhhhhhcc--ccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHH-HHHHHHHHHHHHHHHHHh
Q 013992 43 FGYDTGVISGALLYIRDDF--KSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTS-ILVADFLFFVGAVIMAAA 119 (432)
Q Consensus 43 ~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~-l~~~~~~~~~~~~~~~~~ 119 (432)
.......+...+|.+.+++ +.+..+. +...+...++..++.++.|+++||++||+. .....++.+++..+....
T Consensus 254 ~~~~~~~~~~~~p~~l~~~~~~~s~~~~---~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~ 330 (412)
T TIGR02332 254 LTNTLSAINIWTPQILQSFNQGSSNIMI---GLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASAT 330 (412)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHh---HHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhc
Confidence 3333444556777777765 4455556 888899999999999999999999997774 344444444443332223
Q ss_pred CChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHH
Q 013992 120 PNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPA 199 (432)
Q Consensus 120 ~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~ 199 (432)
.+....+++-.+.+++.....+.......|.+|+++|++++|+.+....+|.+++|.+.+.+.+..++|++.|++.++..
T Consensus 331 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 331 DHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred CCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence 33222222222333333223333444557789999999999999999999999999999999998767999988766543
No 181
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.15 E-value=1.3e-10 Score=110.87 Aligned_cols=158 Identities=16% Similarity=0.107 Sum_probs=103.6
Q ss_pred chhhhhhhh-ccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHH---HHHHHHHHh--CChhH
Q 013992 51 SGALLYIRD-DFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFF---VGAVIMAAA--PNPGA 124 (432)
Q Consensus 51 ~~~~~~i~~-~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~---~~~~~~~~~--~~~~~ 124 (432)
....|.+.+ +.|.+..+. ++....+.++..++.++.|+++||+++|+....+..... ++.+..... .+.+.
T Consensus 271 ~~~~p~~l~~~~g~s~~~~---~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (438)
T TIGR00712 271 LDWSPTYLKEVKHFALDKS---SWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLV 347 (438)
T ss_pred HHhHHHHHHHccCCChhhH---HHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHH
Confidence 344555544 467777777 888888889999999999999999975432222322221 111222221 23333
Q ss_pred HHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHH-HHHHHHHHhhccCCCCchHHHHHhhHHHHHHHH
Q 013992 125 LITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSG-QFLSYLINLAFTRAPGTWRWMLGVAGIPALLQF 203 (432)
Q Consensus 125 ~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g-~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~ 203 (432)
.....+..|++.............|.+|+++|+.+.|+.+....+| ..++|.+.+.+.+..+ |...|++.+...++..
T Consensus 348 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g-~~~~~~~~~~~~~~~~ 426 (438)
T TIGR00712 348 DMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILAV 426 (438)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhcc-chHHHHHHHHHHHHHH
Confidence 3334444554332222222345789999999999999998777766 5789999999999877 9999988777666665
Q ss_pred HH-HhhcCCC
Q 013992 204 IL-MLLLPES 212 (432)
Q Consensus 204 ~~-~~~~~e~ 212 (432)
+. ++..||+
T Consensus 427 ~~~~~~~~~~ 436 (438)
T TIGR00712 427 ILLIVVMIGE 436 (438)
T ss_pred HHHHHHHhhc
Confidence 55 5556665
No 182
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.15 E-value=5.3e-10 Score=105.69 Aligned_cols=146 Identities=14% Similarity=0.027 Sum_probs=110.8
Q ss_pred hhhh-hhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHh-----CChhHHHH
Q 013992 54 LLYI-RDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAA-----PNPGALIT 127 (432)
Q Consensus 54 ~~~i-~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~ 127 (432)
.|.+ .+++|.+..+. ++......++..++.++.|+++||+|+|+.+..+.++..++.++.... ++.+.+.+
T Consensus 238 ~p~~~~~~~g~~~~~~---g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 314 (406)
T PRK15402 238 SPVILISGEQLSSYEY---GLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTA 314 (406)
T ss_pred hHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHH
Confidence 3443 46678877766 777777777888999999999999999999999888887777766543 35666777
Q ss_pred HHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHH
Q 013992 128 GRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFI 204 (432)
Q Consensus 128 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~ 204 (432)
..++.|++.+...+......... ++++|++..+..+....+|..+|+.+.+.+.+..+ |....+..++..++...
T Consensus 315 ~~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~ 389 (406)
T PRK15402 315 GLSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGG-NGLFNLFNLANGLLWLL 389 (406)
T ss_pred HHHHHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCc-hHHHHHHHHHHHHHHHH
Confidence 88889999887776665555443 45889999999999999999999999999988877 55544444444444433
No 183
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.14 E-value=1.2e-09 Score=102.62 Aligned_cols=145 Identities=10% Similarity=-0.015 Sum_probs=113.7
Q ss_pred hhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHH-HHHHHHHHHHhCChhHHHHHHhh
Q 013992 53 ALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFL-FFVGAVIMAAAPNPGALITGRVF 131 (432)
Q Consensus 53 ~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~r~l 131 (432)
..|.+.+++|.+..+. +.+...+.++..++.++.+++.||.+ |+.++.+..+ .....++....++.+.+.+..++
T Consensus 239 ~~p~~~~~~g~s~~~~---g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l 314 (394)
T PRK10213 239 IRPVYMNLAGFGVDGL---TLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWGSDKIVATGVAII 314 (394)
T ss_pred HHHHHHHhcCCChhHH---HHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 3466777888887777 88889999999999999999999965 4444444444 44444455566778888888899
Q ss_pred hhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHH
Q 013992 132 VGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQF 203 (432)
Q Consensus 132 ~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~ 203 (432)
.|++.+...+...+++.+..| +++++..+.......+|..+|+.+++.+.+..+ ++..++..++..++..
T Consensus 315 ~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g-~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 315 WGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIG-LTSPLMLSGTLMLLTA 384 (394)
T ss_pred HHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hhhHHHHHHHHHHHHH
Confidence 999999888888888988887 456788888888889999999999999999877 8888888776554443
No 184
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.13 E-value=2.7e-10 Score=107.21 Aligned_cols=152 Identities=11% Similarity=0.081 Sum_probs=115.4
Q ss_pred hhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhc-cccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHh
Q 013992 52 GALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMND-RFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRV 130 (432)
Q Consensus 52 ~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d-r~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 130 (432)
..+|.+.++.+.++.+. +++.+...++...+..+.+++.| |++.|+.+..+.++.+++.++.+++++++.+.+..+
T Consensus 229 ~~~p~~~~~~~~~~~~~---g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 305 (400)
T PRK11646 229 LMLPIMVNDIAGSPSAV---KWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLIC 305 (400)
T ss_pred HhhhhhHHhhcCCchHH---HHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 34566656654455555 77777777666655655666665 577777778888888888888888888888878888
Q ss_pred hhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCC---chHHHHHhhHHHHHHHHHHH
Q 013992 131 FVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPG---TWRWMLGVAGIPALLQFILM 206 (432)
Q Consensus 131 l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~---~wr~~f~~~~~~~~~~~~~~ 206 (432)
+.|++.+...|...+++.|..|+++|++++++.+....+|..+||.+++++.+..+ .-...++..++.+++..+..
T Consensus 306 l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (400)
T PRK11646 306 LFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLAL 384 (400)
T ss_pred HHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHHH
Confidence 88998888888888999999999999999999999999999999999999987642 12455555555555554443
No 185
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.12 E-value=8.3e-10 Score=104.14 Aligned_cols=148 Identities=16% Similarity=0.118 Sum_probs=104.9
Q ss_pred hhhhhhccccchhhhHHHHHHHHHH-HHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHH---HHh-CChhHHHHH
Q 013992 54 LLYIRDDFKSVDRKTLLQESIVSMA-VAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIM---AAA-PNPGALITG 128 (432)
Q Consensus 54 ~~~i~~~~~~~~~~~~~~~~~~s~~-~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~~~~~ 128 (432)
.+.+.+++|.+.++. +++.+.. .++..++.++.|++.||+|||+.+..+..+..+..+.. ++. ++.+.+.+.
T Consensus 233 ~~~l~~~~G~~~~~~---g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 309 (402)
T PRK11902 233 TTFLIRGAGFSAGEV---GIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALA 309 (402)
T ss_pred HHHHHHhcCCCHHHH---HHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 345667788887777 7777554 45688999999999999999998887777666554433 344 455655555
Q ss_pred Hh----hhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHH
Q 013992 129 RV----FVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFI 204 (432)
Q Consensus 129 r~----l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~ 204 (432)
-+ ..|++.+...+....++.+.+|.+++ +..+....+|..++..+++.+.+..| |+..|...++.+++..+
T Consensus 310 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~~G-~~~~f~~~~~~~~~~~~ 384 (402)
T PRK11902 310 IGIENLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEAYG-WPGFYLMTVVIALPGLA 384 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHH
Confidence 43 44555666666666777777776554 44555556777766778999999888 99999999888877766
Q ss_pred HHhhc
Q 013992 205 LMLLL 209 (432)
Q Consensus 205 ~~~~~ 209 (432)
+....
T Consensus 385 ~~~~~ 389 (402)
T PRK11902 385 LLWLM 389 (402)
T ss_pred HHHHH
Confidence 65443
No 186
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.11 E-value=3.7e-09 Score=99.17 Aligned_cols=137 Identities=20% Similarity=0.328 Sum_probs=100.7
Q ss_pred hhh-hhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHh-----CChhHHHH
Q 013992 54 LLY-IRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAA-----PNPGALIT 127 (432)
Q Consensus 54 ~~~-i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~ 127 (432)
.|. +.+++|.++.+. +++.+...++..++.++.|++.||+|||+.+..+..+..++.++.... ++...+..
T Consensus 229 ~~~~~~~~~g~~~~~~---g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (385)
T TIGR00710 229 APFVYIDIMGVSPSVF---GLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIG 305 (385)
T ss_pred ChHHHHHHcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence 344 345788887777 888899999999999999999999999999988888877776665543 23445555
Q ss_pred HHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHH-HHHHHHHHHhhccCCCCchHHHHHhhH
Q 013992 128 GRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITS-GQFLSYLINLAFTRAPGTWRWMLGVAG 196 (432)
Q Consensus 128 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~-g~~i~~~i~~~l~~~~~~wr~~f~~~~ 196 (432)
..++.|++.+...+.......|..| ++|+++.++.+..... |...++.++ .+.+..+ |...+....
T Consensus 306 ~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~-~~~~~~~-~~~~~~~~~ 372 (385)
T TIGR00710 306 PMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS-LIHGNTA-WPMSLSCLV 372 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH-hccccCh-HHHHHHHHH
Confidence 6778899888888888888889887 5689999988766554 555566555 4443332 555444433
No 187
>PRK09848 glucuronide transporter; Provisional
Probab=99.10 E-value=8.3e-10 Score=105.70 Aligned_cols=129 Identities=15% Similarity=0.141 Sum_probs=99.6
Q ss_pred hhhhhh-hccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhC--ChhHHHHHH
Q 013992 53 ALLYIR-DDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAP--NPGALITGR 129 (432)
Q Consensus 53 ~~~~i~-~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~r 129 (432)
..|++. +.+|.+.... ++......++..++.++.+++.||+|+|+++..+.++..++.++..+.+ +++.+.+..
T Consensus 250 ~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~ 326 (448)
T PRK09848 250 SSLFYVRYVLNDTGLFT---VLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVAL 326 (448)
T ss_pred hheeeEeeecCChHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHH
Confidence 344443 3455544333 4444444667788999999999999999999999998888887776654 566677778
Q ss_pred hhhhccccchhhhHHHHHHhcCCcc-------cchhHHHHHHHHHHHHHHHHHHHHhhccCC
Q 013992 130 VFVGLGVGMASMTSPLYISEASPAK-------IRGALVSTNGFLITSGQFLSYLINLAFTRA 184 (432)
Q Consensus 130 ~l~G~~~~~~~~~~~~~i~~~~~~~-------~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~ 184 (432)
++.|+|.+...+...++.+|..|.+ ++|...+..+....+|..+++.+.+.+.+.
T Consensus 327 ~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~ 388 (448)
T PRK09848 327 AIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGL 388 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999998888754 358899999999999999999988876543
No 188
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.09 E-value=6.8e-10 Score=101.63 Aligned_cols=151 Identities=15% Similarity=0.186 Sum_probs=125.6
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhhccccchh
Q 013992 61 FKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMAS 140 (432)
Q Consensus 61 ~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~ 140 (432)
++..+......|.+.+...+..++...+..++.+|+|.|+.++++..++.+=.+++++++|.+.+.+.+.+.|+-.+...
T Consensus 251 f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~l 330 (412)
T PF01306_consen 251 FQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLL 330 (412)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHH
T ss_pred hcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHH
Confidence 33333344445999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhcCCcccchhHHHH-HHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHH-HhhcCCC
Q 013992 141 MTSPLYISEASPAKIRGALVST-NGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFIL-MLLLPES 212 (432)
Q Consensus 141 ~~~~~~i~~~~~~~~R~~~~~~-~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~e~ 212 (432)
.....|+++.+|+|..+....+ .+....+|..+...++|.+.|..| .+..|++.+.+.++..++ .+.++++
T Consensus 331 va~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G-~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 331 VAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIG-FQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred HHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcC-cHHHHHHHHHHHHHHHHHheeeecCC
Confidence 9999999999999887777776 467888999999999999999887 888898888777766666 5556544
No 189
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.08 E-value=1.1e-09 Score=105.52 Aligned_cols=133 Identities=10% Similarity=0.096 Sum_probs=98.2
Q ss_pred cchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHH-----hCChhH
Q 013992 50 ISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAA-----APNPGA 124 (432)
Q Consensus 50 ~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~ 124 (432)
.+...+++.++...+.... +.+.+...++..++.+++++++||+|+|+.+..+..+..++.+.... .++.+.
T Consensus 250 ~~~~~~y~~~y~~~~~~~~---~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (473)
T PRK10429 250 INGFAIYYFTYVIGDADLF---PYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALL 326 (473)
T ss_pred HhhheeeEEEEECCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHH
Confidence 3334445544443333333 66666677888899999999999999999999888776666555432 345667
Q ss_pred HHHHHhhhhccccchhhhHHHHHHhcCC-------cccchhHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 013992 125 LITGRVFVGLGVGMASMTSPLYISEASP-------AKIRGALVSTNGFLITSGQFLSYLINLAFTRAP 185 (432)
Q Consensus 125 ~~~~r~l~G~~~~~~~~~~~~~i~~~~~-------~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~ 185 (432)
+++.-++.|++.+...+...++++|..+ ++..|..++......-+|..+++.+.+++.+..
T Consensus 327 ~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~ 394 (473)
T PRK10429 327 IVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLI 394 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 7777788899999889888899999865 233366889999999999999999988876543
No 190
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.08 E-value=2.8e-10 Score=106.37 Aligned_cols=139 Identities=22% Similarity=0.236 Sum_probs=99.3
Q ss_pred cchhhhh-hhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcccc-chHHHH-HHH-HHHHHHHHHHHH--hCChh
Q 013992 50 ISGALLY-IRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFG-RRTSIL-VAD-FLFFVGAVIMAA--APNPG 123 (432)
Q Consensus 50 ~~~~~~~-i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G-rr~~l~-~~~-~~~~~~~~~~~~--~~~~~ 123 (432)
.....|. +.+++|.+..+. +...+...++..++.++.|++.||.+ ||+... ... ....++...... ..+..
T Consensus 235 ~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (379)
T TIGR00881 235 ILDWSPLYLTQEKGFSKEKA---SWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPL 311 (379)
T ss_pred HHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHH
Confidence 3444454 445678887777 88899999999999999999999864 333222 221 111222222222 23455
Q ss_pred HHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHH
Q 013992 124 ALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWML 192 (432)
Q Consensus 124 ~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f 192 (432)
...+..++.|+......+....+..|.+|+++|+++.++.+....+|..++|.+.+.+.+..+ |++.|
T Consensus 312 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~f 379 (379)
T TIGR00881 312 MDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFG-WAGAF 379 (379)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhc-ccccC
Confidence 555666777766555566666788999999999999999999999999999999999999877 88754
No 191
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.06 E-value=1.3e-09 Score=116.94 Aligned_cols=144 Identities=15% Similarity=0.241 Sum_probs=120.4
Q ss_pred hhhhhccccchh-hhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhh
Q 013992 55 LYIRDDFKSVDR-KTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVG 133 (432)
Q Consensus 55 ~~i~~~~~~~~~-~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G 133 (432)
+++.+++|.+.. .. +++.+...++..++.++.|+++||+++|+++.++.++.+++.++..+..+.+.+++..++.|
T Consensus 257 ~~~~~~~g~s~~~~~---g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 333 (1146)
T PRK08633 257 AYAKEVLGLDNTFQV---QYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFG 333 (1146)
T ss_pred HHHHHHhCCCcHHHH---HHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 345566788776 66 88999999999999999999999999999999999988888888888889888888999999
Q ss_pred ccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHH
Q 013992 134 LGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALL 201 (432)
Q Consensus 134 ~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~ 201 (432)
++.+...+...+++.+..|+++|++++++.+....+|..+++.+++.+.....++...|++.+.+.++
T Consensus 334 ~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 334 FSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLI 401 (1146)
T ss_pred HHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 99999888889999999999999999999999999999888888776654321366666665554443
No 192
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.05 E-value=6.2e-09 Score=98.37 Aligned_cols=275 Identities=15% Similarity=0.179 Sum_probs=165.1
Q ss_pred chhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcccc-----chHHHHHHHHHHHHHHHHHHHhC----C
Q 013992 51 SGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFG-----RRTSILVADFLFFVGAVIMAAAP----N 121 (432)
Q Consensus 51 ~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G-----rr~~l~~~~~~~~~~~~~~~~~~----~ 121 (432)
....|.+.+++|.++.+. ....+...+...+ .++.|.++|-+. ||+-++++.++..++.+..+..+ +
T Consensus 10 ~~~~~~l~~~l~ls~~~~---~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s 85 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQL---QRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESS 85 (433)
T ss_pred HHHHHHHHHHcCCCHHHH---HHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccch
Confidence 456678889999999888 7777777776655 789999999873 55555667766666555555533 4
Q ss_pred hhHHHHHHhhhhccccchhhhHHHHHHhcCCc--ccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHH
Q 013992 122 PGALITGRVFVGLGVGMASMTSPLYISEASPA--KIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPA 199 (432)
Q Consensus 122 ~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~--~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~ 199 (432)
.....+.-++..+|.......+-+...|.... +.|+...+.......+|.+++..++|.+.+..+ +|..|.+.+.+.
T Consensus 86 ~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~-~~~~f~i~~~~~ 164 (433)
T PF03092_consen 86 AAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFG-PQGVFLISAALP 164 (433)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCC-CeEEehHHHHHH
Confidence 66666677888888888888888898888742 337788888888899999999999999998877 899998888766
Q ss_pred HHHHHHHhhcCCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHHHH-
Q 013992 200 LLQFILMLLLPESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRGLI- 278 (432)
Q Consensus 200 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 278 (432)
.+..+..+++.|..+ +++.++.... .+..........++.....++.++.+..+...+
T Consensus 165 ~l~~~~~~~~~~e~~----~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~ 223 (433)
T PF03092_consen 165 LLMLIVALFLLEERK----VRPADEVFSF-----------------GKEEVPCLFGSFREQLSELWRALQQRAIWQPILF 223 (433)
T ss_pred HHHHHHHHHhhhhcc----ccccchhhcc-----------------cccccchhhHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 666555444433211 0000000000 000000000001122335567777787777665
Q ss_pred HHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHH
Q 013992 279 AGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVI 353 (432)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 353 (432)
..++... ..........++...... -.+.++...+.+..+..++.++|..+......+..-|+++....++..
T Consensus 224 ~~~~~~~-~~~~~~a~~fy~~~~~~~-gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~ 296 (433)
T PF03092_consen 224 FIFFFNL-PPSISSASSFYFQTDALG-GPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSV 296 (433)
T ss_pred HHHHHHh-ccCCCCccEEEEEecccc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 2211111 111000001111111111 112456666667677777777777777776666666666655544443
No 193
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.04 E-value=1.4e-09 Score=103.41 Aligned_cols=141 Identities=17% Similarity=0.225 Sum_probs=114.1
Q ss_pred cccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhC
Q 013992 41 LLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAP 120 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 120 (432)
++........+...+++.++.-.+++.. +....+..++..++.+++++++||+|+|+++..+..+.+++.++..+.+
T Consensus 235 ~~~~~~~~~~~~~~~y~~~~vl~~~~~~---~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~ 311 (428)
T PF13347_consen 235 FLQWLAFALMNTFLPYYFTYVLGNEGLI---SIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLG 311 (428)
T ss_pred HHHHhhhhhhhhHHHHHHHHHhcCchhh---HHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHH
Confidence 3344444445555566655532223334 7777888999999999999999999999999999999999999888876
Q ss_pred --ChhHHHHHHhhhhccccchhhhHHHHHHhcCCc-------ccchhHHHHHHHHHHHHHHHHHHHHhhccCC
Q 013992 121 --NPGALITGRVFVGLGVGMASMTSPLYISEASPA-------KIRGALVSTNGFLITSGQFLSYLINLAFTRA 184 (432)
Q Consensus 121 --~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~-------~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~ 184 (432)
|.+.+++.-++.|++.+...+...++++|..+. ++.|...+..+....+|..++..+.+.+.+.
T Consensus 312 ~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~ 384 (428)
T PF13347_consen 312 PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLAL 384 (428)
T ss_pred hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998873 3348889999999999999999988877654
No 194
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.01 E-value=1e-09 Score=98.44 Aligned_cols=149 Identities=21% Similarity=0.213 Sum_probs=119.4
Q ss_pred chhhh-hhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhC-------Ch
Q 013992 51 SGALL-YIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAP-------NP 122 (432)
Q Consensus 51 ~~~~~-~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-------~~ 122 (432)
+..+| ++.++|+.++.+. +.....+.+...+..+.+|+++||+|.+|++......+.++..+.+... +.
T Consensus 238 s~~l~~~~~~~fg~~~~~A---g~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~ 314 (417)
T COG2223 238 SAYLPMYLVTQFGLSPVTA---GLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSF 314 (417)
T ss_pred HHHHHHHHHHhcCCChhhH---HHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcch
Confidence 34444 4678899999998 8999999999999999999999999999999999999999888887763 33
Q ss_pred hH----HHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHH
Q 013992 123 GA----LITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIP 198 (432)
Q Consensus 123 ~~----~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~ 198 (432)
.. ++...+..|+|.|. ....+..++|+ +-|.+.|+.+....+|...-|..-+...+..+++...|++....
T Consensus 315 ~~~~~~~l~l~~~~G~GnGs----vfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~ 389 (417)
T COG2223 315 VVFVAVFLALFVFAGLGNGS----VFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAF 389 (417)
T ss_pred HHHHHHHHHHHHHhccCcch----heeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHH
Confidence 33 44455666666664 45666777765 46899999999999999888888888888877799999998887
Q ss_pred HHHHHHHHh
Q 013992 199 ALLQFILML 207 (432)
Q Consensus 199 ~~~~~~~~~ 207 (432)
.+++.+...
T Consensus 390 ~~~a~v~~~ 398 (417)
T COG2223 390 YLVALVLTW 398 (417)
T ss_pred HHHHHHHHH
Confidence 777776633
No 195
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.01 E-value=5.3e-09 Score=98.20 Aligned_cols=139 Identities=9% Similarity=0.013 Sum_probs=109.2
Q ss_pred hhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhhcc
Q 013992 56 YIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLG 135 (432)
Q Consensus 56 ~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 135 (432)
.+.+.+|.++.+. |++.+...++..+++++.+++.||+++|+++..+. +.++..++.++.++++...+..++.|++
T Consensus 231 ~~~~~lg~s~~~~---G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 306 (393)
T PRK11195 231 WAPVALGITLNQP---AYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMALQHSLLPAYPLLILIGAL 306 (393)
T ss_pred HHHHHcCCChhHH---HHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 4456678888777 99999999999999999999999999999888775 4455555566677777777788889999
Q ss_pred ccchhhhHHHHHHhcCCccc-chhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHH
Q 013992 136 VGMASMTSPLYISEASPAKI-RGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIP 198 (432)
Q Consensus 136 ~~~~~~~~~~~i~~~~~~~~-R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~ 198 (432)
.+...+...+.+.|..|++. +|++.++.+....+|..++..+.+.+....-.+++.|...+.+
T Consensus 307 ~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (393)
T PRK11195 307 GGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKLGVPVVAVIVGFGLL 370 (393)
T ss_pred hhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 88888888888888766654 7999999999999999999999887754422355555445444
No 196
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.01 E-value=1.8e-09 Score=104.62 Aligned_cols=131 Identities=15% Similarity=0.081 Sum_probs=109.6
Q ss_pred chhhhhhh-hccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHH----hCChhHH
Q 013992 51 SGALLYIR-DDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAA----APNPGAL 125 (432)
Q Consensus 51 ~~~~~~i~-~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~----~~~~~~~ 125 (432)
...+|.+. +.+|.+..+. ++......++..++.++.|++.||+|||+.+..+..+.+++..+..+ ..+.+.+
T Consensus 275 ~~~~p~~~~~~~g~s~~~~---g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 351 (485)
T TIGR00711 275 FYLLPLYLQQVLGYTALQA---GLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAI 351 (485)
T ss_pred HHHHHHHHHHhcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHH
Confidence 34455544 4578888777 88989999999999999999999999999999999888888877663 2355667
Q ss_pred HHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCC
Q 013992 126 ITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRA 184 (432)
Q Consensus 126 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~ 184 (432)
....++.|++.+...+.......+..|+++|+.+.++.+....+|..+|+.+.+.+.+.
T Consensus 352 ~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 352 ALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77788999999988877777888889999999999999999999999999998877643
No 197
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.99 E-value=1.4e-09 Score=100.79 Aligned_cols=116 Identities=14% Similarity=0.124 Sum_probs=93.6
Q ss_pred cchhhhhhhhccccchhhhHHHHHHHHHHH-HHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHh---------
Q 013992 50 ISGALLYIRDDFKSVDRKTLLQESIVSMAV-AGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAA--------- 119 (432)
Q Consensus 50 ~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~-~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--------- 119 (432)
.....|...+++|.+..+. +.+.+... ++..++.+++|++.||+|||+.+..+.++.+++..+..+.
T Consensus 228 ~~~~~~~~l~~~g~~~~~~---g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (356)
T TIGR00901 228 ATVLTTLFLLDMGFSKEEI---ALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGI 304 (356)
T ss_pred HHHHHHHHHHHcCCCHHHH---HHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCccccc
Confidence 3445566556688887777 77776655 5778999999999999999999998888888776655443
Q ss_pred --CChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHH
Q 013992 120 --PNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLIT 168 (432)
Q Consensus 120 --~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~ 168 (432)
++.+.+..+.++.+++.+...+...+++.|.+|+++|++.+++.+...+
T Consensus 305 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 305 TFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 3456777788899999999999999999999999999999999876543
No 198
>PRK09669 putative symporter YagG; Provisional
Probab=98.99 E-value=4.3e-09 Score=100.62 Aligned_cols=115 Identities=12% Similarity=0.102 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHH--hCChhHHHHHHhhhhccccchhhhHHHHHHh
Q 013992 72 ESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAA--APNPGALITGRVFVGLGVGMASMTSPLYISE 149 (432)
Q Consensus 72 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~ 149 (432)
+.+.....+...++.+++++++||+|+|+.+..+.++..+..+...+ .++.+.+++..++.|++.+...+...++++|
T Consensus 267 ~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad 346 (444)
T PRK09669 267 TLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSD 346 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45556667778888999999999999999999887766654443322 3567777888889999999999999999999
Q ss_pred cCCc-------ccchhHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 013992 150 ASPA-------KIRGALVSTNGFLITSGQFLSYLINLAFTRAPG 186 (432)
Q Consensus 150 ~~~~-------~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~ 186 (432)
..+. +..|...+..+....+|..+|+.+++.+.+..|
T Consensus 347 ~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~G 390 (444)
T PRK09669 347 VVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVD 390 (444)
T ss_pred hhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 8862 223667888888899999999999988776543
No 199
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.99 E-value=1.4e-09 Score=100.69 Aligned_cols=123 Identities=24% Similarity=0.337 Sum_probs=103.4
Q ss_pred cchhhhhh-hhccccc-hhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHH---hCChhH
Q 013992 50 ISGALLYI-RDDFKSV-DRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAA---APNPGA 124 (432)
Q Consensus 50 ~~~~~~~i-~~~~~~~-~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~ 124 (432)
.....|.+ .+++|.+ ..+. +...+...++..++.++.|++.||+|+|+..........+..+.... .++...
T Consensus 225 ~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (352)
T PF07690_consen 225 FSFFLPLYLQEVLGFSGPSQA---GLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVW 301 (352)
T ss_dssp HHHHHHHHCCHHHHCCTHHHH---HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHH
T ss_pred hhcccchhhhhccCCCHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 55566664 7888888 5666 88899999999999999999999999988887777777666665544 345677
Q ss_pred HHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHH
Q 013992 125 LITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSY 175 (432)
Q Consensus 125 ~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~ 175 (432)
.++.-++.|++.+...+....++.|..|+++|+++.++.+....+|..++|
T Consensus 302 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 302 LIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 777888899999999999999999999999999999999999999999887
No 200
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.97 E-value=3.2e-09 Score=102.27 Aligned_cols=174 Identities=9% Similarity=0.023 Sum_probs=113.8
Q ss_pred HHHHHhhcccceeccccchhhhhh-hhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHH--------HHH
Q 013992 34 FSAGIGGLLFGYDTGVISGALLYI-RDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTS--------ILV 104 (432)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~--------l~~ 104 (432)
...++..+............+|.+ .+++|.+..+. ++..++..++..++.++.|+++||+++|+. +..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~---g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 340 (465)
T TIGR00894 264 WAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKEN---GLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFN 340 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHh---HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHH
Confidence 333444444444444444556654 45678887777 899999999999999999999999875531 111
Q ss_pred HHHHH--HHHHHHHHH-hCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhc
Q 013992 105 ADFLF--FVGAVIMAA-APNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAF 181 (432)
Q Consensus 105 ~~~~~--~~~~~~~~~-~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l 181 (432)
+.... .+..+.... ..+....++.-.+.+.+.+...+.......|..|+ .+|.+.++.+....+|..++|.+.+.+
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~ 419 (465)
T TIGR00894 341 GIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNI 419 (465)
T ss_pred HHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhhee
Confidence 11111 111111222 23444444445555555554555555556677765 799999999999999999999999988
Q ss_pred cCCC--CchHHHHHhhHHHHHHHHHHHhhcCC
Q 013992 182 TRAP--GTWRWMLGVAGIPALLQFILMLLLPE 211 (432)
Q Consensus 182 ~~~~--~~wr~~f~~~~~~~~~~~~~~~~~~e 211 (432)
.+.. ++|+..|.+.++..++..+...++++
T Consensus 420 ~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~ 451 (465)
T TIGR00894 420 LSQDSKNVWLIVFLIMAFVNILCVIFYLIFGS 451 (465)
T ss_pred eCCCCchHHHHHHHHHHHHHHHHHHHeeeeec
Confidence 7753 35999999988877777766555543
No 201
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.96 E-value=5.2e-09 Score=112.01 Aligned_cols=146 Identities=9% Similarity=0.086 Sum_probs=117.5
Q ss_pred hhhhh-hhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHh------------
Q 013992 53 ALLYI-RDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAA------------ 119 (432)
Q Consensus 53 ~~~~i-~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~------------ 119 (432)
.+|.+ .+.+|.+.... +++.+.+.++..++.++.|+++|+.++++.+..+.++.+++.+...+.
T Consensus 247 ~~p~~~~~~~g~~~~~~---g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 323 (1140)
T PRK06814 247 QLPLLAKETLGGDENVA---TLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLK 323 (1140)
T ss_pred HhHHHHHHHcCCchHHH---HHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhccccccccccccc
Confidence 44554 45578877777 999999999999999999999999888877776666666655544443
Q ss_pred --------CChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHH
Q 013992 120 --------PNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWM 191 (432)
Q Consensus 120 --------~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~ 191 (432)
++.+.+++..++.|++.+...+...+++.+.+|+++||+++|..+....+|..+++++.+.+.+...+....
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~ 403 (1140)
T PRK06814 324 SILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWI 403 (1140)
T ss_pred chhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHH
Confidence 677888888899999999999999999999999999999999999999999999999998887543347777
Q ss_pred HHhhHHHHHH
Q 013992 192 LGVAGIPALL 201 (432)
Q Consensus 192 f~~~~~~~~~ 201 (432)
+++.++..++
T Consensus 404 ~~~~~~~~~~ 413 (1140)
T PRK06814 404 ILFIALANLI 413 (1140)
T ss_pred HHHHHHHHHH
Confidence 6665554333
No 202
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.95 E-value=1.5e-08 Score=94.81 Aligned_cols=121 Identities=17% Similarity=0.144 Sum_probs=85.4
Q ss_pred hhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHH---HH-hCChhHHHHHHhh
Q 013992 56 YIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIM---AA-APNPGALITGRVF 131 (432)
Q Consensus 56 ~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~-~~~~~~~~~~r~l 131 (432)
.+.+++|.+..+. ++..+...++..++.++.|++.||+|||+.+..+..+..+..+.. .. ..+.+...++-.+
T Consensus 220 ~~~~~~g~s~~~~---g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (377)
T PRK11102 220 VYIELNGVSPQNF---GYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAA 296 (377)
T ss_pred HHHHHhCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 3455678887777 889999999999999999999999999999988876654433322 22 2345555555545
Q ss_pred hhccccchhhhHHHHHHhcCCcccchhHHHHHHHH-HHHHHHHHHHHHhh
Q 013992 132 VGLGVGMASMTSPLYISEASPAKIRGALVSTNGFL-ITSGQFLSYLINLA 180 (432)
Q Consensus 132 ~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~-~~~g~~i~~~i~~~ 180 (432)
.+.+.+........++.|..| ++|+++.+..... ..+|..+++.++..
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~~ 345 (377)
T PRK11102 297 FVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSLA 345 (377)
T ss_pred HHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 555555555666667788776 6799998886544 55777777777654
No 203
>PRK10133 L-fucose transporter; Provisional
Probab=98.95 E-value=1.4e-08 Score=96.52 Aligned_cols=138 Identities=10% Similarity=-0.046 Sum_probs=108.9
Q ss_pred hhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhhcccc
Q 013992 58 RDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVG 137 (432)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~ 137 (432)
.+++|.++.+. ++....+.++..++.++.+++.||+|||+++..+.++..++.++..+.++.. .+..-.+.|++.+
T Consensus 287 ~~~~g~s~~~a---g~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~ 362 (438)
T PRK10133 287 EEIPGMTAGFA---ANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMS 362 (438)
T ss_pred hhcCCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHH
Confidence 35678888888 9999999999999999999999999999999998888777776666666543 3456678999999
Q ss_pred chhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHH
Q 013992 138 MASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALL 201 (432)
Q Consensus 138 ~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~ 201 (432)
..+|...+...|..|++ .+.+.++... ...|..++|.+.+.+.+..++-|..|++..+..+.
T Consensus 363 ~i~P~~~s~a~~~~~~~-~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~ 424 (438)
T PRK10133 363 IQYPTIFSLGIKNLGQD-TKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAV 424 (438)
T ss_pred HHHHHHHHHHHcccchh-hccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 99999999999998764 5677777654 44678888888888887754367777655544333
No 204
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.94 E-value=5.5e-09 Score=101.22 Aligned_cols=127 Identities=13% Similarity=0.020 Sum_probs=108.2
Q ss_pred hhh-hhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHh---CChhHHHHH
Q 013992 53 ALL-YIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAA---PNPGALITG 128 (432)
Q Consensus 53 ~~~-~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~ 128 (432)
..| ++++.+|.+..+. +.....+.++..++.++.|++.||+|+|+.+..+.++..++.++.... ++.+.....
T Consensus 281 ~~~~~lq~v~g~s~~~a---g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~ 357 (495)
T PRK14995 281 LMAQELQFVHGLSPLEA---GMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGL 357 (495)
T ss_pred HHHHHHHHHcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHH
Confidence 444 3455578888888 999999999999999999999999999999998988888777665442 455666777
Q ss_pred HhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhcc
Q 013992 129 RVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFT 182 (432)
Q Consensus 129 r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~ 182 (432)
.++.|++.+...+.....+.+..|+++++.+.++.+....+|..+|+.+.+.+.
T Consensus 358 ~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~ 411 (495)
T PRK14995 358 MALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLL 411 (495)
T ss_pred HHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999998888889999999999999999999999999999999988775
No 205
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.93 E-value=3.2e-09 Score=93.22 Aligned_cols=130 Identities=18% Similarity=0.178 Sum_probs=95.6
Q ss_pred HHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhH
Q 013992 80 AGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGAL 159 (432)
Q Consensus 80 ~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~ 159 (432)
+....|.++.+.+.||+|||+.+..+.+++++..++.....+-..+.+.-+..-++..+.+.+.++|..|.+|.+.|+.+
T Consensus 392 laefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatg 471 (528)
T KOG0253|consen 392 LAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATG 471 (528)
T ss_pred HhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcc
Confidence 44567888999999999999999999999999998887765544433333333333444555677899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHHHhhcCCC
Q 013992 160 VSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFILMLLLPES 212 (432)
Q Consensus 160 ~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~ 212 (432)
.|.-+...-+|.++.|+++ ...+.. -.....+.+..+++..+...++|-.
T Consensus 472 vGtcSsmaRIggI~~p~iA-~~~e~s--~sl~i~vy~~~~ilagIavcffPiE 521 (528)
T KOG0253|consen 472 VGTCSSMARIGGIFSPVIA-MRAELS--TSLPIFVYGALFILAGIAVCFFPIE 521 (528)
T ss_pred hhhhhhHHhhhhhhhhHHH-HHhccc--eeehHHHHHHHHHHHHHHheeeeec
Confidence 9999999999999999999 333321 2233444555566666666666643
No 206
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.93 E-value=2.5e-08 Score=90.26 Aligned_cols=155 Identities=28% Similarity=0.366 Sum_probs=123.4
Q ss_pred eeccccchhhhhhhhccccchh--hhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCC-
Q 013992 45 YDTGVISGALLYIRDDFKSVDR--KTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPN- 121 (432)
Q Consensus 45 ~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~- 121 (432)
.+........+.+..+++.+.. .. ++..+.+.++..++.++.|.++||+|||+.++.+.....++.+++++..+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (338)
T COG0477 16 LDLGLLSPALPLLLSTLSLSSGRLLY---GLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNV 92 (338)
T ss_pred HhcchHHHHHHHHHHHcCCCchhHHH---HHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccc
Confidence 5555566677777777765542 44 88999999999999999999999999999888888776666777777776
Q ss_pred -hhHHHHHHhhhhccccchhhhHHHHHHhcCCc-ccchhHHHHHHH-HHHHHHHHHHHHHhhccCC-CCchHHHHHhhHH
Q 013992 122 -PGALITGRVFVGLGVGMASMTSPLYISEASPA-KIRGALVSTNGF-LITSGQFLSYLINLAFTRA-PGTWRWMLGVAGI 197 (432)
Q Consensus 122 -~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~R~~~~~~~~~-~~~~g~~i~~~i~~~l~~~-~~~wr~~f~~~~~ 197 (432)
.+.+++.|+.+|++.+...+...+++.|+.|+ ++|+...+.... ...+|..+++.+++.+... ..+||+.|.....
T Consensus 93 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (338)
T COG0477 93 GLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAAL 172 (338)
T ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 89999999999999999999999999999998 678988888888 5778888888777766544 2249997766665
Q ss_pred HHHHH
Q 013992 198 PALLQ 202 (432)
Q Consensus 198 ~~~~~ 202 (432)
.....
T Consensus 173 ~~~~~ 177 (338)
T COG0477 173 LGLLL 177 (338)
T ss_pred HHHHH
Confidence 54433
No 207
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.92 E-value=2.9e-08 Score=92.06 Aligned_cols=153 Identities=20% Similarity=0.145 Sum_probs=103.4
Q ss_pred ccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccc---hHHHHH-HHHHHHHHHHHHHHhCChhH
Q 013992 49 VISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGR---RTSILV-ADFLFFVGAVIMAAAPNPGA 124 (432)
Q Consensus 49 ~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Gr---r~~l~~-~~~~~~~~~~~~~~~~~~~~ 124 (432)
.+...+|.+.++.|.+.. . +...++..+...++ .++++||.+| |+.... ..++.++...+.++..+...
T Consensus 210 ~~~~wlp~~L~~~g~s~~-~---~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~ 282 (368)
T TIGR00903 210 NLAIWLEAALRPAGLEDI-A---GDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLA 282 (368)
T ss_pred HHHHHHHHHHHHCCCChH-H---HHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHH
Confidence 344566777777776543 3 55555555544444 4677777654 343332 34444444445555555555
Q ss_pred HHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHH
Q 013992 125 LITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFI 204 (432)
Q Consensus 125 ~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~ 204 (432)
.++.-++.|++.....+...++.+|.+|++.|+++.|+.+....+|..++|.+.+.+.. + -+..|.+.+.+.++..+
T Consensus 283 ~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~-~~~~f~~~~~~~~i~~~ 359 (368)
T TIGR00903 283 LFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--S-AEAYFTFLAILITIAFA 359 (368)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--C-HHHHHHHHHHHHHHHHH
Confidence 55556667777777777788899999999999999999999999999898888877763 3 77788887777777666
Q ss_pred HHhhcCC
Q 013992 205 LMLLLPE 211 (432)
Q Consensus 205 ~~~~~~e 211 (432)
....+++
T Consensus 360 ~~~~~~~ 366 (368)
T TIGR00903 360 IALLLPN 366 (368)
T ss_pred HHHhCCC
Confidence 6544454
No 208
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.92 E-value=3.7e-09 Score=94.88 Aligned_cols=173 Identities=20% Similarity=0.194 Sum_probs=133.6
Q ss_pred HHHHHHHHhhcccceeccccchhhhh-hhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccc--cchHHHH-HHH
Q 013992 31 RLAFSAGIGGLLFGYDTGVISGALLY-IRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRF--GRRTSIL-VAD 106 (432)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~--Grr~~l~-~~~ 106 (432)
+.+..++++.+..+..+..+.--.|. +.|+-|.+..+. ++..+++-.+...|+++.|+++||+ |||.... +.+
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a---~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~ 328 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKA---NWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFM 328 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHH---HHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHH
Confidence 34566777777777777766665564 456667888888 9999999999999999999999996 6775554 344
Q ss_pred HHHHHHHHHHHHhC--ChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHH-HHHHHHHHHhhccC
Q 013992 107 FLFFVGAVIMAAAP--NPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITS-GQFLSYLINLAFTR 183 (432)
Q Consensus 107 ~~~~~~~~~~~~~~--~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~-g~~i~~~i~~~l~~ 183 (432)
+...++.+..-.++ |+....++-++.|+..-+..........|..|++--|.+.|+...+..+ |...+....+++.|
T Consensus 329 ~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d 408 (448)
T COG2271 329 LLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIAD 408 (448)
T ss_pred HHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEe
Confidence 44444444444454 4577788888888876666666667789999999999999999999998 88888888899988
Q ss_pred CCCchHHHHHhhHHHHHHHHHHHh
Q 013992 184 APGTWRWMLGVAGIPALLQFILML 207 (432)
Q Consensus 184 ~~~~wr~~f~~~~~~~~~~~~~~~ 207 (432)
..+ |...|++..+.+++..+++.
T Consensus 409 ~~g-W~g~Fi~~~~~a~l~~lll~ 431 (448)
T COG2271 409 TWG-WDGGFIVLSIAALLAILLLL 431 (448)
T ss_pred cCC-CcchHHHHHHHHHHHHHHHH
Confidence 877 99999988877776666533
No 209
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.92 E-value=6.9e-08 Score=85.13 Aligned_cols=177 Identities=21% Similarity=0.222 Sum_probs=139.3
Q ss_pred cCCCChhHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcc-ccchH
Q 013992 22 LSWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDR-FGRRT 100 (432)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr-~Grr~ 100 (432)
+.|+++..|.+.+...+-.+..+ ..-.-+|.+..|-|.+..+. |.+.+...+.....++....+++| -++|+
T Consensus 203 ~vw~~~~aW~vtLfmGlqS~~~Y----~~~~WLP~ili~~G~sa~~a---G~llsl~~l~~~~~~ll~P~la~R~~n~r~ 275 (395)
T COG2807 203 KVWRSPLAWQVTLFMGLQSLLYY----IVIGWLPAILIDRGLSAAEA---GSLLSLMQLAQLPTALLIPLLARRSKNQRP 275 (395)
T ss_pred ccccCchhHHHHHHHHhhHHHHH----HHHHHHHHHHHHcCCCHHHh---hhHHHHHHHHHHHHHHHHHHHHHHhcccch
Confidence 35667777777666665444333 34556799999999999999 999999999999999999999985 46778
Q ss_pred HHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccc-hhHHHHHHHHHHHHHHHHHHHHh
Q 013992 101 SILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIR-GALVSTNGFLITSGQFLSYLINL 179 (432)
Q Consensus 101 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R-~~~~~~~~~~~~~g~~i~~~i~~ 179 (432)
..+....++.++.+.+.+.+....+.. -++.|+|.|..++.+...+.+..+..++ ++-.++.+....+=...||.+.|
T Consensus 276 ~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G 354 (395)
T COG2807 276 LVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFG 354 (395)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHh
Confidence 888888888888777777765444433 4899999999999999999998876544 56666666666666778999999
Q ss_pred hccCCCCchHHHHHhhHHHHHHHHHHH
Q 013992 180 AFTRAPGTWRWMLGVAGIPALLQFILM 206 (432)
Q Consensus 180 ~l~~~~~~wr~~f~~~~~~~~~~~~~~ 206 (432)
++-|..++|+...+..+...+...+.-
T Consensus 355 ~lhDa~gsw~~~~~~l~~~~i~m~i~G 381 (395)
T COG2807 355 FLHDATGSWSAPLVLLALATLLMLIFG 381 (395)
T ss_pred HHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence 999999999999988887777666653
No 210
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.92 E-value=5.9e-09 Score=97.86 Aligned_cols=134 Identities=16% Similarity=0.047 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHH-h-----CChhHHHHHHhhhhccccchhhhHHHHHHh
Q 013992 76 SMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAA-A-----PNPGALITGRVFVGLGVGMASMTSPLYISE 149 (432)
Q Consensus 76 s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-~-----~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~ 149 (432)
.+..+...+..+++|+++||+|+||++.++.+...++...... . .+++.+.+..+...++.|........++.+
T Consensus 293 ~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~ 372 (462)
T PRK15034 293 FFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAV 372 (462)
T ss_pred HHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHH
Confidence 3455778888999999999999999999998877777643222 2 245555555544444444444455667777
Q ss_pred cCCc---------------------ccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHH-Hh
Q 013992 150 ASPA---------------------KIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFIL-ML 207 (432)
Q Consensus 150 ~~~~---------------------~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~-~~ 207 (432)
++|+ ++-|.+.|+.+....+|..+.|.+-+...+..+++...|+...+..+++..+ |+
T Consensus 373 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~ 452 (462)
T PRK15034 373 IFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWL 452 (462)
T ss_pred HHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 7764 1346788888888999888888777777777677998888888777777666 44
Q ss_pred hc
Q 013992 208 LL 209 (432)
Q Consensus 208 ~~ 209 (432)
..
T Consensus 453 ~y 454 (462)
T PRK15034 453 VY 454 (462)
T ss_pred Hh
Confidence 43
No 211
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.91 E-value=7.6e-09 Score=97.34 Aligned_cols=132 Identities=13% Similarity=0.153 Sum_probs=87.3
Q ss_pred hhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhhccc
Q 013992 57 IRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGV 136 (432)
Q Consensus 57 i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~ 136 (432)
+.+++|.+..+. +.+.+...++..++.++.+++.||+|||+++..+..+..++.++..+.++.+.....-.+.+.+.
T Consensus 230 ~~~~~g~~~~~~---~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 306 (392)
T PRK10473 230 LMEQMGFSRGEY---AIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGF 306 (392)
T ss_pred HHHHcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 446678877776 88888899999999999999999999999999999988888888777766554444444444444
Q ss_pred cchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHH
Q 013992 137 GMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGI 197 (432)
Q Consensus 137 ~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~ 197 (432)
+...+. ....+..|.++|+ +..+....++..+++.+++++.+..+ +.......+.
T Consensus 307 ~~~~~~--~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g-~~~~~~~~~~ 361 (392)
T PRK10473 307 SVGFGV--AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLG-ISAWNMLIGI 361 (392)
T ss_pred HHHhHH--HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhc-cchhHHHHHH
Confidence 433333 2334555655553 33333445555666666666655444 5444444343
No 212
>PRK11043 putative transporter; Provisional
Probab=98.87 E-value=6.9e-08 Score=91.12 Aligned_cols=129 Identities=13% Similarity=0.083 Sum_probs=98.2
Q ss_pred hhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHH---HH--hCChhHHHH
Q 013992 53 ALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIM---AA--APNPGALIT 127 (432)
Q Consensus 53 ~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~--~~~~~~~~~ 127 (432)
..|.+.+++|.+..+. ++......++..++..+.+++.||+|+|+.+.......+++.+.. .. .++....++
T Consensus 225 ~~p~~~~~~g~s~~~~---g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (401)
T PRK11043 225 GSPFILEQMGYSPADI---GLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLI 301 (401)
T ss_pred HhHHHHHHcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHH
Confidence 4566667788887777 777777788889999999999999999997766555544443322 22 345555666
Q ss_pred HHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 013992 128 GRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAP 185 (432)
Q Consensus 128 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~ 185 (432)
...+.|++.+...+.......|..| ++|+++.++.+.....+...++.+.+.+.+..
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 358 (401)
T PRK11043 302 PFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALISTP 358 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence 6778888888888888888778776 56999999999888888888888888887653
No 213
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.86 E-value=1.9e-06 Score=81.23 Aligned_cols=130 Identities=9% Similarity=-0.047 Sum_probs=92.0
Q ss_pred hhhhhhhccccchh--hhHHHHHHHHHHHHHHHHH-HHhhhhhhccccchHHHHHHHHHHHHHHHHHHHh--C-------
Q 013992 53 ALLYIRDDFKSVDR--KTLLQESIVSMAVAGAIIG-AAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAA--P------- 120 (432)
Q Consensus 53 ~~~~i~~~~~~~~~--~~~~~~~~~s~~~~~~~i~-~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~------- 120 (432)
++-++.+.+..+.. ......++-+...+...+. .++.+++++|++|++++-.....+.....++++. +
T Consensus 25 iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p 104 (472)
T TIGR00769 25 ILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHP 104 (472)
T ss_pred HHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCC
Confidence 44556666655322 1222377777777766666 8999999999999999888777776666665553 1
Q ss_pred ----------------------ChhHHHHHHhhhhccccchhh-hHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHH
Q 013992 121 ----------------------NPGALITGRVFVGLGVGMASM-TSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLI 177 (432)
Q Consensus 121 ----------------------~~~~~~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i 177 (432)
+.|...+..+...+-...... .-..++.|.++.+|-.|..++++.+.++|..+++.+
T Consensus 105 ~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~ 184 (472)
T TIGR00769 105 TALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRT 184 (472)
T ss_pred cHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122233333444444444444 667889999999999999999999999999999988
Q ss_pred Hhhcc
Q 013992 178 NLAFT 182 (432)
Q Consensus 178 ~~~l~ 182 (432)
..++.
T Consensus 185 ~~~~~ 189 (472)
T TIGR00769 185 IKYFS 189 (472)
T ss_pred HHHHH
Confidence 88876
No 214
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.86 E-value=1.2e-06 Score=86.51 Aligned_cols=156 Identities=17% Similarity=0.252 Sum_probs=121.7
Q ss_pred cchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcc-ccchHHHHHHHHHHHHHHHHHHHhCC-------
Q 013992 50 ISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDR-FGRRTSILVADFLFFVGAVIMAAAPN------- 121 (432)
Q Consensus 50 ~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~------- 121 (432)
......++.+.+|.++... ..+...+....-+..+++|.++|+ +||++.++.+.++..++.++.+++..
T Consensus 7 ~aiLvlYl~~~lg~~~~~A---~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~ 83 (654)
T TIGR00926 7 RTILVLYFLNFLGFSESTS---TVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPL 83 (654)
T ss_pred HHHHHHHHHHHcCCcHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccch
Confidence 3445556677788887777 667777777777888999999995 79999999999999999988877421
Q ss_pred -hhHHHHHHhhhhccccchhhhHHHHHHhcCCccc---chhHHHHHHHHHHHHHHHHHHHHhhccCCC------CchHHH
Q 013992 122 -PGALITGRVFVGLGVGMASMTSPLYISEASPAKI---RGALVSTNGFLITSGQFLSYLINLAFTRAP------GTWRWM 191 (432)
Q Consensus 122 -~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~---R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~------~~wr~~ 191 (432)
....+++-.+..+|.|++-|...+...|-+++++ |...+.++..+.++|..+++.+.+++.+.. .+|...
T Consensus 84 ~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~a 163 (654)
T TIGR00926 84 HDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLA 163 (654)
T ss_pred HHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHH
Confidence 1235567788888999999999999999997643 567888889999999999999988886332 149999
Q ss_pred HHhhHHHHHHHHHHHhh
Q 013992 192 LGVAGIPALLQFILMLL 208 (432)
Q Consensus 192 f~~~~~~~~~~~~~~~~ 208 (432)
|.+.++..++.+++...
T Consensus 164 F~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 164 FGVPAILMILALIVFMA 180 (654)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99988877777666443
No 215
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.84 E-value=6.8e-08 Score=81.95 Aligned_cols=149 Identities=13% Similarity=0.148 Sum_probs=107.6
Q ss_pred hhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHH-HHHHHHHhCChhHHHHHHhhhhc
Q 013992 56 YIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFV-GAVIMAAAPNPGALITGRVFVGL 134 (432)
Q Consensus 56 ~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~r~l~G~ 134 (432)
..++.||++..+. +.+.+....-.++.+++.|.++||+|++...+.+..+..+ +-....++ ++.=..+-.+.|+
T Consensus 290 fF~~rfGlS~~~a---~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft--~lsPy~~m~~lGL 364 (459)
T KOG4686|consen 290 FFQKRFGLSAVSA---GNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT--FLSPYTSMTFLGL 364 (459)
T ss_pred HHHHhhCCChhhc---cchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhh--hccHHHHHHHHhh
Confidence 4678899999888 8888888888889999999999999999877665544443 33333332 2222345567787
Q ss_pred cccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHH--H-HHhhHHHHHHHHHHHhhc
Q 013992 135 GVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRW--M-LGVAGIPALLQFILMLLL 209 (432)
Q Consensus 135 ~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~--~-f~~~~~~~~~~~~~~~~~ 209 (432)
............++...|+++-|.+.+..+...++|.++.+++.+.+.+..+++-+ . |...+.+++....+.+.+
T Consensus 365 sysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 365 SYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYL 442 (459)
T ss_pred hHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhe
Confidence 76665555566778888889999999999999999999999999999998764332 3 344444444444444444
No 216
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.82 E-value=1.6e-08 Score=91.61 Aligned_cols=127 Identities=14% Similarity=0.211 Sum_probs=93.0
Q ss_pred hhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcc----ccchHHHHH-HHHHHHHHHHHHHHhCCh----
Q 013992 52 GALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDR----FGRRTSILV-ADFLFFVGAVIMAAAPNP---- 122 (432)
Q Consensus 52 ~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr----~Grr~~l~~-~~~~~~~~~~~~~~~~~~---- 122 (432)
..++++.++.|++..-. +.+--..-+...+.+|+.|..+|| |||||.++. +.....++.++..++.++
T Consensus 53 sy~tPyl~~lGvphk~~---S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~l 129 (498)
T KOG0637|consen 53 SYLTPYLQSLGVPHKWS---SIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLL 129 (498)
T ss_pred ccccHHHHHcCCCcccc---cccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHh
Confidence 34556667788877666 666666667778889999999995 898887765 445555666666655432
Q ss_pred -------------hHHHHHHhhhhccccchhhhHHHHHHhcCCcccchh-HHHHHHHHHHHHHHHHHHHHhhc
Q 013992 123 -------------GALITGRVFVGLGVGMASMTSPLYISEASPAKIRGA-LVSTNGFLITSGQFLSYLINLAF 181 (432)
Q Consensus 123 -------------~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~-~~~~~~~~~~~g~~i~~~i~~~l 181 (432)
..++++.-+.=++.-.....+.+++.|...+++|.+ +.+++.....+|..+|..+++++
T Consensus 130 gd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 130 GDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred cCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc
Confidence 233444444455666788889999999998777766 99999999999999998888744
No 217
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.80 E-value=1.6e-07 Score=90.37 Aligned_cols=135 Identities=16% Similarity=0.155 Sum_probs=109.1
Q ss_pred HHHHHHHHHHHHHHHHhhh----hhhcc-ccchHHH--HHHHHHHHHHHHHHHH---------hCChhHHHHHHhhhhcc
Q 013992 72 ESIVSMAVAGAIIGAAIGG----WMNDR-FGRRTSI--LVADFLFFVGAVIMAA---------APNPGALITGRVFVGLG 135 (432)
Q Consensus 72 ~~~~s~~~~~~~i~~~~~g----~l~dr-~Grr~~l--~~~~~~~~~~~~~~~~---------~~~~~~~~~~r~l~G~~ 135 (432)
+++.+...+...+.+++.. ++.|| .+.+... .+|.++.+++.+..++ ..|++.++...++.++|
T Consensus 315 ~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~g 394 (475)
T TIGR00924 315 IWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLG 394 (475)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHH
Confidence 6788888888888887755 45554 3334433 7788888888877764 46899999999999999
Q ss_pred ccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHHHh
Q 013992 136 VGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFILML 207 (432)
Q Consensus 136 ~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~ 207 (432)
.....|...+++.|..|++.||++++++.....+|..+++.+.....+..+ |...|...++..++..++.+
T Consensus 395 e~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 465 (475)
T TIGR00924 395 ELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQG-VTGVFGKIGLVTLLVGVVMA 465 (475)
T ss_pred HHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-hhhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998887766655 88888887776666555533
No 218
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.79 E-value=8.1e-09 Score=93.44 Aligned_cols=178 Identities=16% Similarity=0.100 Sum_probs=131.4
Q ss_pred HHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHH-----HHHHHHHH-HHHHHHHHHhhhhhhccccchHHHHH
Q 013992 31 RLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLL-----QESIVSMA-VAGAIIGAAIGGWMNDRFGRRTSILV 104 (432)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-----~~~~~s~~-~~~~~i~~~~~g~l~dr~Grr~~l~~ 104 (432)
+.++..+...|+.-......+.....+.+.++..+.+... ......+. ..++..+-.+...+.|+.|||+..+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 5666777777776666666777777888877765544322 11122222 22334466677889999999999999
Q ss_pred HHHHHHHHHHHHHHhCC--------hhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHH
Q 013992 105 ADFLFFVGAVIMAAAPN--------PGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYL 176 (432)
Q Consensus 105 ~~~~~~~~~~~~~~~~~--------~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~ 176 (432)
+.+++++..+..+...| ...+.+..++.-+|-+ .....+.+|.||.+.|+..-|+..+..-.|.+++..
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn---~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~ 460 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPN---ATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAF 460 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCC---ceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHH
Confidence 99999999999888766 1222333333334332 334456799999999999999999999999999999
Q ss_pred HHhhccC-----CCCchHHHHHhhHHHHHHHHHHHhhcCCC
Q 013992 177 INLAFTR-----APGTWRWMLGVAGIPALLQFILMLLLPES 212 (432)
Q Consensus 177 i~~~l~~-----~~~~wr~~f~~~~~~~~~~~~~~~~~~e~ 212 (432)
.-.++.+ ..+ -|+.|++.+...++..+..+++||+
T Consensus 461 ~F~~~t~~~yp~~~g-~~~v~~i~~~~~~~gi~~T~l~pEt 500 (538)
T KOG0252|consen 461 GFLYLTDHNYPPNIG-VRNVFIILAGCMLLGILFTLLIPET 500 (538)
T ss_pred HhhHhhhccCCcccc-chHHHHHHHHHHHHhHheeEEeecc
Confidence 9888888 445 8999999999999999888899998
No 219
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.78 E-value=8.9e-11 Score=112.63 Aligned_cols=160 Identities=17% Similarity=0.192 Sum_probs=101.8
Q ss_pred cccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHH--H---hCC-
Q 013992 48 GVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMA--A---APN- 121 (432)
Q Consensus 48 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~--~---~~~- 121 (432)
.......+.+.++.+.++... ......+...++.++...+.||+|||+.++.+..+.+++.+..+ . .++
T Consensus 270 ~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 344 (451)
T PF00083_consen 270 NFIFYYSPSIFENAGISNSFL-----ATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSS 344 (451)
T ss_pred ccccccccccccccccccccc-----cccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 344455567777776665511 11222344556666777999999999999999998888877664 1 111
Q ss_pred ----hhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHH
Q 013992 122 ----PGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGI 197 (432)
Q Consensus 122 ----~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~ 197 (432)
...+...............+....+..|.+|.+.|+++.++......++..+++.+...+.+..+.+.......++
T Consensus 345 ~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~ 424 (451)
T PF00083_consen 345 SWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGV 424 (451)
T ss_pred cccccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHH
Confidence 2222222211111222344666678899999999999999998888888888888877777654423333333334
Q ss_pred HHHHHHHHHhhcCCC
Q 013992 198 PALLQFILMLLLPES 212 (432)
Q Consensus 198 ~~~~~~~~~~~~~e~ 212 (432)
..+...+.++++||+
T Consensus 425 ~~i~~i~~~~~lpET 439 (451)
T PF00083_consen 425 CLIAIIFVYFFLPET 439 (451)
T ss_pred HHHHHhheeEEEeeC
Confidence 444444558889999
No 220
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.75 E-value=1.7e-07 Score=87.06 Aligned_cols=137 Identities=17% Similarity=0.224 Sum_probs=102.9
Q ss_pred eccccchhhhhhhhc-cccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhC--Ch
Q 013992 46 DTGVISGALLYIRDD-FKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAP--NP 122 (432)
Q Consensus 46 ~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~ 122 (432)
.....+....+..+. +|.++... .+.......+..++.+++.++.+|+|+|+++..+.++..++.++.-+.+ +.
T Consensus 251 ~~~i~~s~~~yy~~y~lg~~~l~~---~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~ 327 (467)
T COG2211 251 AFNIRGSIMVYYVTYVLGDPELFA---YLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSV 327 (467)
T ss_pred HHHHHhhhhheeEEEEcCChHHHH---HHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcch
Confidence 334444444444332 33333333 5566666677777799999999999999999999999999999888876 77
Q ss_pred hHHHHHHhhhhccccchhhhHHHHHHhcCCc------cc-chhHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 013992 123 GALITGRVFVGLGVGMASMTSPLYISEASPA------KI-RGALVSTNGFLITSGQFLSYLINLAFTRAP 185 (432)
Q Consensus 123 ~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~------~~-R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~ 185 (432)
...++..++.+++.+...+...++++|..+- ++ -|...+......-+|.+++..+.++.....
T Consensus 328 ~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~ 397 (467)
T COG2211 328 VLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAI 397 (467)
T ss_pred HHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 8888888999999999999999998776532 22 277788888888888888888777776543
No 221
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.73 E-value=1.5e-07 Score=88.79 Aligned_cols=123 Identities=7% Similarity=-0.117 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcC
Q 013992 72 ESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEAS 151 (432)
Q Consensus 72 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~ 151 (432)
+...+.+..+..++.++.+++.||+++|+++.++.++..+..++..+.++... ...-.+.|++.+..+|...+...+..
T Consensus 272 ~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~~glf~s~~fp~i~sl~~~~~ 350 (410)
T TIGR00885 272 ANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYCLTLCSAFMSLMFPTIYGIALKGL 350 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 44556666788899999999999999999999999999998888888777544 56677888999999999999999999
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHHHHhhccCCC-----CchHHHHHhhHH
Q 013992 152 PAKIRGALVSTNGFLITSGQFLSYLINLAFTRAP-----GTWRWMLGVAGI 197 (432)
Q Consensus 152 ~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~-----~~wr~~f~~~~~ 197 (432)
+++.+.-+..+.. ..+|.++.|++.|++.|.. ++.+..|++..+
T Consensus 351 g~~~~~~s~~l~~--~~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~ 399 (410)
T TIGR00885 351 GQDTKYGAAGLVM--AIIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLL 399 (410)
T ss_pred hhhhhhhHHHHHH--HHhccchHHHHHHHHHHHhcccccCccchHHHHHHH
Confidence 8765433333333 3389999999999999943 236677765443
No 222
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.70 E-value=3.2e-06 Score=78.68 Aligned_cols=253 Identities=15% Similarity=0.086 Sum_probs=155.0
Q ss_pred HHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcc
Q 013992 75 VSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAK 154 (432)
Q Consensus 75 ~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 154 (432)
.++....+.+++++.+.+.|+.|.|+.+.++...+....+..-+ .|-+-++++-.+.|+|.+..+.....+++|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 56677778899999999999999999999999998877665555 45667788899999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhccCCCC--------chHHH----------HHhhHHH---HHHHHHHHhhcCCCH
Q 013992 155 IRGALVSTNGFLITSGQFLSYLINLAFTRAPG--------TWRWM----------LGVAGIP---ALLQFILMLLLPESP 213 (432)
Q Consensus 155 ~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~--------~wr~~----------f~~~~~~---~~~~~~~~~~~~e~~ 213 (432)
.+.+..++.......+.++|..+...+..... +-|+. ..+.+++ ..+..+...+.|...
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~~ 214 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPSKD 214 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCccc
Confidence 99999999888777777777665544432211 11111 1111111 111111222222210
Q ss_pred HHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHHHHHHHHHHHHhhhcchH
Q 013992 214 RWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRGLIAGVGLQVFQQFVGIN 293 (432)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (432)
. ..+. +.. ++...+..+...+++++++........+...+ ...
T Consensus 215 -~------~~~~------------------------~~~-~~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~-----~~S 257 (461)
T KOG3098|consen 215 -V------VNCK------------------------SSS-ETSFSELLKLTFKLLKTPKMLLLFPFFFYTGL-----ETS 257 (461)
T ss_pred -h------hhhh------------------------hhc-cccHHHHHHHHHHHhcCHhHHHHHHHHHHHHH-----HHH
Confidence 0 0000 000 00111112344566777766443333222211 112
Q ss_pred HHHHhHHHHH--H-HcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhh---hCCchhhHhHHHHHHHHHHHHHHHHhc
Q 013992 294 TVMYYSPTIV--Q-LSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDR---TGRKKLLVISLSGVILSLGVLSAVFHE 365 (432)
Q Consensus 294 ~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (432)
......|..+ . .....+....+......+++.+++....+.+.|| +|+++.+.++..+..+.+++.-...+.
T Consensus 258 f~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~ 335 (461)
T KOG3098|consen 258 FWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPN 335 (461)
T ss_pred HHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccc
Confidence 2222222222 2 3344555666777777788888888888888876 467888888887777777666655543
No 223
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.69 E-value=2.2e-07 Score=89.08 Aligned_cols=150 Identities=13% Similarity=0.173 Sum_probs=116.9
Q ss_pred hccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHH----------hCChhHHHHH
Q 013992 59 DDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAA----------APNPGALITG 128 (432)
Q Consensus 59 ~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~----------~~~~~~~~~~ 128 (432)
+.+|.++... |.......++..++....+++.+|++.|+++.++.++.+++.+.... .++.+.+...
T Consensus 281 ~~lG~s~~~~---G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~ 357 (468)
T TIGR00788 281 QCLPGGPSFS---GMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGD 357 (468)
T ss_pred ccCCCCcchh---hhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeeh
Confidence 4678888888 98999999999999999999999999999999999999888755431 1333445556
Q ss_pred HhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCC------chHHHHHhhH-HHHHH
Q 013992 129 RVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPG------TWRWMLGVAG-IPALL 201 (432)
Q Consensus 129 r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~------~wr~~f~~~~-~~~~~ 201 (432)
-++.+++.+....+...++.+..|+++++...++.....++|..+++.+++.+.+..+ +.++..+... +..++
T Consensus 358 ~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~ 437 (468)
T TIGR00788 358 SIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLL 437 (468)
T ss_pred hHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHH
Confidence 6788888888888899999999999999999999999999999999999998887644 2233332222 33333
Q ss_pred HHHHHhhcCC
Q 013992 202 QFILMLLLPE 211 (432)
Q Consensus 202 ~~~~~~~~~e 211 (432)
.+....++|+
T Consensus 438 ~l~~~~llP~ 447 (468)
T TIGR00788 438 PLPLLHLLPR 447 (468)
T ss_pred HHHHHHhCCC
Confidence 3334456785
No 224
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.68 E-value=7.3e-07 Score=83.97 Aligned_cols=124 Identities=19% Similarity=0.121 Sum_probs=92.7
Q ss_pred hhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHH-HHHHHHHH--hCChhHHHHHHhhhh
Q 013992 57 IRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFF-VGAVIMAA--APNPGALITGRVFVG 133 (432)
Q Consensus 57 i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~-~~~~~~~~--~~~~~~~~~~r~l~G 133 (432)
+.+.+|.+..+. ++......++..++.++.+++.||++++..........+ +....... ..+.+.+.+..++.|
T Consensus 234 ~~~~~g~~~~~~---~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (394)
T PRK11652 234 MGAVLGLSSMTV---SILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFF 310 (394)
T ss_pred HHHHcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 334477777776 888888888999999999999999984433322222222 22222222 245667778889999
Q ss_pred ccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCC
Q 013992 134 LGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRA 184 (432)
Q Consensus 134 ~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~ 184 (432)
++.+...+....+..|.+| ++++...++.+....+|..+++.+++.+.+.
T Consensus 311 ~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 311 FGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 9999999999999999987 5689999999999999999999999888665
No 225
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.68 E-value=3.9e-07 Score=88.18 Aligned_cols=134 Identities=13% Similarity=0.134 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHHHHhh----hhhhccccchHHHHHHHHHHHHHHHHHHHhCC---------hhHHHHHHhhhhccccc
Q 013992 72 ESIVSMAVAGAIIGAAIG----GWMNDRFGRRTSILVADFLFFVGAVIMAAAPN---------PGALITGRVFVGLGVGM 138 (432)
Q Consensus 72 ~~~~s~~~~~~~i~~~~~----g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~---------~~~~~~~r~l~G~~~~~ 138 (432)
++..++..+...+..++. +++.||++.++.+.+|.++.+++.+..+...+ .++++..++++|+|+..
T Consensus 319 ~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~ 398 (500)
T PRK09584 319 EQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELM 398 (500)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHH
Confidence 555666665555555554 77788888888899999999999888776644 46788899999999999
Q ss_pred hhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccC------C---CCchHHHHHhhHHHHHHHHHH
Q 013992 139 ASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTR------A---PGTWRWMLGVAGIPALLQFIL 205 (432)
Q Consensus 139 ~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~------~---~~~wr~~f~~~~~~~~~~~~~ 205 (432)
..|...+++.+..|++.||+++|.+..+..+|..++..+...... . .++..+.|...++.+++..++
T Consensus 399 ~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~ 474 (500)
T PRK09584 399 ISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVL 474 (500)
T ss_pred HhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999888887887777666643221 0 112567777777666554444
No 226
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.66 E-value=4.2e-06 Score=77.95 Aligned_cols=327 Identities=11% Similarity=-0.009 Sum_probs=164.5
Q ss_pred HHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHH------h--C----ChhHHHHHHhh---hhccccch-h
Q 013992 77 MAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAA------A--P----NPGALITGRVF---VGLGVGMA-S 140 (432)
Q Consensus 77 ~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~------~--~----~~~~~~~~r~l---~G~~~~~~-~ 140 (432)
.-.+...+..+..|.+.||..|.++...+.+..-++..+.+. . + +.+....+..+ .|.-.-.. .
T Consensus 46 ~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~ 125 (432)
T PF06963_consen 46 VRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASI 125 (432)
T ss_pred HHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 334456677888999999999999988777666544433321 1 1 12222222222 11111111 1
Q ss_pred hhHHHHHHhcC------CcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHH-Hhhc----
Q 013992 141 MTSPLYISEAS------PAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFIL-MLLL---- 209 (432)
Q Consensus 141 ~~~~~~i~~~~------~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~-~~~~---- 209 (432)
....+.=.||. +++.+.+..+...-.--+..+++|++.+.+.+..+ .+....+.+...++..++ ++++
T Consensus 126 ~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s-~~~~~~~i~~~N~~S~~vEy~~l~~VY 204 (432)
T PF06963_consen 126 ANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFAS-PVIAAIFIAGWNLASVFVEYFLLARVY 204 (432)
T ss_pred hhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111223443 23334555666666666788999999999988776 888888888777777776 5544
Q ss_pred CCCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHHHHHHHHHHHHhhh
Q 013992 210 PESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRGLIAGVGLQVFQQF 289 (432)
Q Consensus 210 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (432)
.+.|.-..++++.++....... ...+ +.......+. .++.-+.....++..++++.+....-. .++++
T Consensus 205 ~~~P~L~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~----~~~~~~~~~~~w~~Y~~q~vflas~al-alLY~---- 272 (432)
T PF06963_consen 205 NSVPALAVKKRSSESESSSDEE--SSSE-SSSDPSILKR----LWNPLRTIIRGWRTYFRQPVFLASFAL-ALLYF---- 272 (432)
T ss_pred HhChHhcCCCCCcccccccccc--cccc-ccchhhHHHH----HHHHHHHHhccHHHHHhCHHHHHHHHH-HHHHH----
Confidence 2223211111111111000000 0000 0000000000 001111113345566666655432222 22221
Q ss_pred cchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHHHHHHHHHHhccCCC
Q 013992 290 VGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILSLGVLSAVFHETTSH 369 (432)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (432)
....+......|+...+. ++...+..-....+.++.++++..++.+|+|..+.-..+...-..+..+...........
T Consensus 273 -TVLsf~~lmt~yl~~~G~-s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~ 350 (432)
T PF06963_consen 273 -TVLSFGGLMTAYLKSQGY-SPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSP 350 (432)
T ss_pred -HHhcCcHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 122233345567777754 477778888888999999999999999999988776666655544443333222221111
Q ss_pred --CCccchhccccc-cccccccc-ccccccCccchhhhhccCCCCcccccccccc
Q 013992 370 --SPMVSAVETSHF-SNLTCPDY-SSAATADRWDCMKCLKASSPDCGFCASHSNK 420 (432)
Q Consensus 370 --~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~r~~~~~~g~~~~~~~~ 420 (432)
......++.+.. .-...-.+ .......++.+|++.|++ -.|+-.+..+.
T Consensus 351 ~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~--v~gvq~sl~~l 403 (432)
T PF06963_consen 351 FSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGA--VSGVQNSLQSL 403 (432)
T ss_pred chhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhH--HHHHHHHHHHH
Confidence 111112222211 11111011 122245556777799999 77776655443
No 227
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.65 E-value=4.4e-08 Score=90.48 Aligned_cols=165 Identities=15% Similarity=0.169 Sum_probs=138.0
Q ss_pred cccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhC
Q 013992 41 LLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAP 120 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~ 120 (432)
++.+.....+...+-.-.+|.+..+.-. |........|-.+.-++.+++..|+|+-+++..++.+..+=.+..+..+
T Consensus 381 v~mG~g~~lv~tFLfWHled~~~~~~Lf---Gv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~ 457 (618)
T KOG3762|consen 381 VVMGAGVGLVFTFLFWHLEDLGGIKTLF---GVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQ 457 (618)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCcceee---eehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhc
Confidence 3344444444444444456777555555 7777888888888889999999999999999999999999999999999
Q ss_pred ChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHH-HHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHH
Q 013992 121 NPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGF-LITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPA 199 (432)
Q Consensus 121 ~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~-~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~ 199 (432)
|.|+.+-..+++|+..+..+....+|+++..|++-|..+.++... ..++|--+|.++++.+.+..+ =|..|.+.++.+
T Consensus 458 n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg-~~ttf~~~giAc 536 (618)
T KOG3762|consen 458 NPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFG-ARTTFRIFGIAC 536 (618)
T ss_pred CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeeh-hHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998764 477889999999999999987 899999998888
Q ss_pred HHHHHHHhhc
Q 013992 200 LLQFILMLLL 209 (432)
Q Consensus 200 ~~~~~~~~~~ 209 (432)
++.+++...+
T Consensus 537 l~~l~~~~~i 546 (618)
T KOG3762|consen 537 LVTLALFISI 546 (618)
T ss_pred HHHHHHHHHh
Confidence 7777665554
No 228
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.64 E-value=1.5e-07 Score=65.20 Aligned_cols=81 Identities=14% Similarity=0.061 Sum_probs=75.3
Q ss_pred cceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCCh
Q 013992 43 FGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNP 122 (432)
Q Consensus 43 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 122 (432)
.++.+..++|.+|.+.+|.+++..+. +++.+.+.+||.+|.+...++.++..+++.+..+++...+..+.+++.++.
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~a---g~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~ 80 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQA---GWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSF 80 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhch
Confidence 46778889999999999999999999 999999999999999999999999999999999999999999999999988
Q ss_pred hHHH
Q 013992 123 GALI 126 (432)
Q Consensus 123 ~~~~ 126 (432)
+.+.
T Consensus 81 ~~w~ 84 (85)
T PF06779_consen 81 WLWS 84 (85)
T ss_pred HHHh
Confidence 7653
No 229
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.63 E-value=1.3e-06 Score=79.00 Aligned_cols=149 Identities=15% Similarity=0.252 Sum_probs=120.5
Q ss_pred hhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhc-cccchHHHHHHHHHHHHHHHHH---HHhCChhHHHHHHh
Q 013992 55 LYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMND-RFGRRTSILVADFLFFVGAVIM---AAAPNPGALITGRV 130 (432)
Q Consensus 55 ~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d-r~Grr~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~r~ 130 (432)
|+=.+-||++..+. ..+......|..++....|++.. |.++|+.-.+++....++..+. +...+.+.+...-+
T Consensus 233 Pygg~Vfgmsv~eT---T~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~ 309 (403)
T PF03209_consen 233 PYGGEVFGMSVGET---TRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVF 309 (403)
T ss_pred CchhHHcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 44456689998888 78889999999999999998887 7788888778887777776654 44578899999999
Q ss_pred hhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCC---------CchHHHHHhhHHHHHH
Q 013992 131 FVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAP---------GTWRWMLGVAGIPALL 201 (432)
Q Consensus 131 l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~---------~~wr~~f~~~~~~~~~ 201 (432)
+.|++.|.......+...|..++++.|..+|.+...+.....++..+++.+.|.. ..+..+|.+.++..++
T Consensus 310 l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~ 389 (403)
T PF03209_consen 310 LLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLA 389 (403)
T ss_pred HHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998776631 1355667766665555
Q ss_pred HHHHH
Q 013992 202 QFILM 206 (432)
Q Consensus 202 ~~~~~ 206 (432)
...+.
T Consensus 390 a~~ll 394 (403)
T PF03209_consen 390 ALVLL 394 (403)
T ss_pred HHHHH
Confidence 55443
No 230
>PRK11462 putative transporter; Provisional
Probab=98.61 E-value=1.3e-06 Score=83.78 Aligned_cols=113 Identities=13% Similarity=0.112 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCC--hhHHHHHHhhhhccccchhhhHHHHHHh
Q 013992 72 ESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPN--PGALITGRVFVGLGVGMASMTSPLYISE 149 (432)
Q Consensus 72 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~r~l~G~~~~~~~~~~~~~i~~ 149 (432)
+.+.+.+.++..++.+++++++||+|+|+++..+..+..+..++..+.++ ...+.+.-++.|++.+...+...++++|
T Consensus 266 ~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad 345 (460)
T PRK11462 266 VAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSD 345 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55677788888899999999999999999887665555444444333332 2234445566777777666666677777
Q ss_pred cCC-------cccchhHHHHHHHHHHHHHHHHHHHHhhccCC
Q 013992 150 ASP-------AKIRGALVSTNGFLITSGQFLSYLINLAFTRA 184 (432)
Q Consensus 150 ~~~-------~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~ 184 (432)
..+ .+..|..++......-+|..+++.+++.+.+.
T Consensus 346 ~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~ 387 (460)
T PRK11462 346 TVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAY 387 (460)
T ss_pred hHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 665 22225556777778888888888887776543
No 231
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.58 E-value=1.4e-06 Score=84.88 Aligned_cols=172 Identities=17% Similarity=0.053 Sum_probs=103.4
Q ss_pred HHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHH
Q 013992 36 AGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVI 115 (432)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 115 (432)
+.+..+.+...........+.+.+..+.+... .+......+...++..+...+.||+|||+.++.+...+.++.++
T Consensus 300 ~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~----~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~ 375 (513)
T KOG0254|consen 300 LLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT----FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVI 375 (513)
T ss_pred HHHHHHHHHhCCceEEeehHHHHHhcCCCCch----HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHH
Confidence 33333333344455555667777777665432 22333344455666677799999999999999999999999988
Q ss_pred HHHhC----C---------hhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhcc
Q 013992 116 MAAAP----N---------PGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFT 182 (432)
Q Consensus 116 ~~~~~----~---------~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~ 182 (432)
.+... + ...+...-+..........+....+.+|.+|.+.|+++.++......+...+-......+.
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~ 455 (513)
T KOG0254|consen 376 LAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFIT 455 (513)
T ss_pred HHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76531 1 1112222222233333345566678899999999999999877666555544333333333
Q ss_pred CCCCchHHHHHhhHHHHHHHH--HHHhhcCCC
Q 013992 183 RAPGTWRWMLGVAGIPALLQF--ILMLLLPES 212 (432)
Q Consensus 183 ~~~~~wr~~f~~~~~~~~~~~--~~~~~~~e~ 212 (432)
+..+ +...|...+..+.+.. ..++++||+
T Consensus 456 ~~~~-~~~~f~~f~~~~~~~~~~fv~~~~pET 486 (513)
T KOG0254|consen 456 EALG-IGGTFGYFGGICLLSLIIFVFFFVPET 486 (513)
T ss_pred Hhcc-ccchHHHHHHHHHHHHHHHheEEcccC
Confidence 3322 3445555444444443 357788999
No 232
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.54 E-value=1.1e-07 Score=84.67 Aligned_cols=159 Identities=16% Similarity=0.180 Sum_probs=119.2
Q ss_pred ccccchhhhh-hhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcccc--chHHHHHHHHHHHHHHHHHHHhCChh
Q 013992 47 TGVISGALLY-IRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFG--RRTSILVADFLFFVGAVIMAAAPNPG 123 (432)
Q Consensus 47 ~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~~~~~~~~~~~ 123 (432)
....-|.++. +.+.+..+.-+. |+..--..+.+.++..+.|.++||++ |-.....+++..++++....+++++.
T Consensus 286 lafLePtlslwm~e~m~~p~w~~---G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~ 362 (464)
T KOG3764|consen 286 LAFLEPTLSLWMLETMFTPGWEV---GLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIA 362 (464)
T ss_pred HHHhCcccHHHHHHhccCCCcce---eeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHH
Confidence 3334455554 445555333244 66666677889999999999999999 54455567777777777788999999
Q ss_pred HHHHHHhhhhccccchhhhHHHHHHhcCCcc------cchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHH
Q 013992 124 ALITGRVFVGLGVGMASMTSPLYISEASPAK------IRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGI 197 (432)
Q Consensus 124 ~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~------~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~ 197 (432)
++++-++..|++.+.......-...+..+.+ .-|...++...++++|.++||.+++.+.+..| ++|...+.++
T Consensus 363 ~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iG-F~wl~~iig~ 441 (464)
T KOG3764|consen 363 QLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIG-FEWLMTIIGI 441 (464)
T ss_pred HHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehh-HHHHHHHHHH
Confidence 9999998888887776655555555554433 33678899999999999999999999999998 9999988888
Q ss_pred HHHHHHHHHhhc
Q 013992 198 PALLQFILMLLL 209 (432)
Q Consensus 198 ~~~~~~~~~~~~ 209 (432)
..++...++..+
T Consensus 442 ~n~iyapvl~ll 453 (464)
T KOG3764|consen 442 LNLIYAPVLLLL 453 (464)
T ss_pred HHHHHHHHHHHH
Confidence 887776664443
No 233
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.50 E-value=1.2e-06 Score=78.65 Aligned_cols=150 Identities=12% Similarity=0.049 Sum_probs=117.6
Q ss_pred ccccchhhhhhhhc-cccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHH
Q 013992 47 TGVISGALLYIRDD-FKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGAL 125 (432)
Q Consensus 47 ~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~ 125 (432)
.......++.+.+| .|.++.+. +...+.+..+.++|.....++..|+...|.+.+..++..+.++..+++++...+
T Consensus 252 Eva~gsfl~~y~~~~~g~~~~~a---a~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~~ 328 (422)
T COG0738 252 EVAIGSFLVSYLEELLGLNEQQA---AYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGVVAL 328 (422)
T ss_pred HHHHHHHHHHHHHhcCCccHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHHH
Confidence 44455555655555 67788888 889999999999999999999999999999999998888888889999885544
Q ss_pred HHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHH
Q 013992 126 ITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQF 203 (432)
Q Consensus 126 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~ 203 (432)
.+-++.|+..+..+|...+...+..| + .....+..-....+|.++.|.+.|++.|..+ -...+....++|.+..
T Consensus 329 -~~l~~ig~F~simfPTIfslal~~l~-~-~ts~~s~~l~maivGGAiiP~l~G~i~d~~g-~~~~~~~~pllc~lyV 402 (422)
T COG0738 329 -YALFLIGLFNSIMFPTIFSLALKNLG-E-HTSVGSGLLVMAIVGGAIIPPLQGVIADMFG-IQLTFLIVPLLCYLYV 402 (422)
T ss_pred -HHHHHHHHHhHHHHHHHHHHHHhccC-c-cccccceeeeeheecchHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHH
Confidence 45578899999999999999999998 3 3444444455667788999999999999887 6666654445555444
No 234
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.49 E-value=2.5e-07 Score=86.09 Aligned_cols=115 Identities=16% Similarity=0.191 Sum_probs=81.1
Q ss_pred hhhhh-hhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHh--C--ChhHHH
Q 013992 52 GALLY-IRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAA--P--NPGALI 126 (432)
Q Consensus 52 ~~~~~-i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~--~~~~~~ 126 (432)
...|. +.+.+|.+..+. +.+.+...+...++.++.|+++||+|||+.+..+......+..+..+. + +.+...
T Consensus 246 ~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (366)
T TIGR00886 246 SIFAMFFKDQFGLSKVTA---GAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFI 322 (366)
T ss_pred HHHHHHHHHHcCCcHHHH---HHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHH
Confidence 33444 445678887777 888888889999999999999999999988887777766666555442 2 454444
Q ss_pred HHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHH
Q 013992 127 TGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSG 170 (432)
Q Consensus 127 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g 170 (432)
+.-.+.+++.|........++.|..| ++|+.+.|+.+....+|
T Consensus 323 ~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 323 VLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 44444444445455556667778877 57999999877765543
No 235
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.45 E-value=5.4e-06 Score=79.93 Aligned_cols=137 Identities=16% Similarity=0.165 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccccchHH-------HHHHHHHHHHHHHHHH-----Hh-----CChhHHHHHHhhhhc
Q 013992 72 ESIVSMAVAGAIIGAAIGGWMNDRFGRRTS-------ILVADFLFFVGAVIMA-----AA-----PNPGALITGRVFVGL 134 (432)
Q Consensus 72 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~-------l~~~~~~~~~~~~~~~-----~~-----~~~~~~~~~r~l~G~ 134 (432)
+++.+.+.+...+..++.+++.||+|+|+. +.+|.++.+++.+..+ +. .+++.++...+++|+
T Consensus 312 ~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~ 391 (489)
T PRK10207 312 VSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSL 391 (489)
T ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 556667777787889999999999999973 6777777777664321 22 356777788899999
Q ss_pred cccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCC---------CCchHHHHHhhHHHHHHHHHH
Q 013992 135 GVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRA---------PGTWRWMLGVAGIPALLQFIL 205 (432)
Q Consensus 135 ~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~---------~~~wr~~f~~~~~~~~~~~~~ 205 (432)
|.+...+...+++.+..|++.++.+++++.....+|..++..++...... .++..+.|...++..++..++
T Consensus 392 Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~ 471 (489)
T PRK10207 392 GELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVV 471 (489)
T ss_pred HHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998888655321 112456677767666555555
Q ss_pred Hhh
Q 013992 206 MLL 208 (432)
Q Consensus 206 ~~~ 208 (432)
++.
T Consensus 472 ~~~ 474 (489)
T PRK10207 472 MAL 474 (489)
T ss_pred HHH
Confidence 333
No 236
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.44 E-value=2.5e-06 Score=67.54 Aligned_cols=108 Identities=12% Similarity=0.157 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCc
Q 013992 74 IVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPA 153 (432)
Q Consensus 74 ~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 153 (432)
-.++......+++++.+.+.+++|.|+.+++|.+.+.+-. ..-+-++.+.++.+-++.|++.+..+.....++.+..++
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~-~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~ 120 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYI-ASFFYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTE 120 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHH-HHHHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCH
Confidence 4455566677888889999999999999999999887544 334567888899999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhhcc
Q 013992 154 KIRGALVSTNGFLITSGQFLSYLINLAFT 182 (432)
Q Consensus 154 ~~R~~~~~~~~~~~~~g~~i~~~i~~~l~ 182 (432)
++|++-.+++......+.++|.++...+.
T Consensus 121 ~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 121 ETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888888877765543
No 237
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.34 E-value=1.5e-06 Score=82.26 Aligned_cols=173 Identities=14% Similarity=0.084 Sum_probs=114.6
Q ss_pred HHHHHHHhhcccceeccccchhhhhhh-hccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccc---------hHH
Q 013992 32 LAFSAGIGGLLFGYDTGVISGALLYIR-DDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGR---------RTS 101 (432)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Gr---------r~~ 101 (432)
.+..+.+..+........+...+|... +-+|.+-.+. |+..++..+...+..+++|.++||.-+ |..
T Consensus 259 ~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~---G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkif 335 (466)
T KOG2532|consen 259 PVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRET---GFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIF 335 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhh---hHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHH
Confidence 455566666666666666666677655 4577877888 999999999999999999999998755 222
Q ss_pred HHHHHHHHHHHHHHHHHhCC--hhHHHHHH-hhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 013992 102 ILVADFLFFVGAVIMAAAPN--PGALITGR-VFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLIN 178 (432)
Q Consensus 102 l~~~~~~~~~~~~~~~~~~~--~~~~~~~r-~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~ 178 (432)
-.++....++..+..++.++ .+..+++. +..++ .|...+....-..|..| ++-+..+++.+....+...++|.+.
T Consensus 336 n~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~-~g~~~~Gf~~~~~~~ap-q~a~~l~g~~~~~~~~~~~~~P~~v 413 (466)
T KOG2532|consen 336 NTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGL-SGFNISGFYKNHQDIAP-QHAGFVMGIINFVGALAGFIAPLLV 413 (466)
T ss_pred HhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHH-cccchhhhHhhhhhccc-hHHHHHHHHHHHHHHHHHHHHHHhe
Confidence 23444444555555555553 21122222 11222 12222223233344444 4579999999999999999999999
Q ss_pred hhccCC--CCchHHHHHhhHHHHHHHHHHHhhc
Q 013992 179 LAFTRA--PGTWRWMLGVAGIPALLQFILMLLL 209 (432)
Q Consensus 179 ~~l~~~--~~~wr~~f~~~~~~~~~~~~~~~~~ 209 (432)
+.+... ..+||++|++.+.+.++..+.+.++
T Consensus 414 g~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 414 GIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred eeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 999852 2269999999998888877665554
No 238
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.31 E-value=1.6e-05 Score=69.76 Aligned_cols=272 Identities=11% Similarity=0.073 Sum_probs=161.4
Q ss_pred hhhhhh-hccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHhh
Q 013992 53 ALLYIR-DDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVF 131 (432)
Q Consensus 53 ~~~~i~-~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l 131 (432)
..|++. .+-|++.++.. .-+.-...-.+.+.-.+.=.+.|..-.|++++.-.+.......+.-+.++.+.+=+.-++
T Consensus 27 ~tpyl~gp~~NlT~~~l~--~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~F 104 (433)
T KOG3810|consen 27 LTPYLLGPDKNLTEDQLT--NEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFF 104 (433)
T ss_pred cchhccCCCCCccHHHHh--cccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhh
Confidence 334443 34455555432 222233334455666667778899988999888777777777788889999998888888
Q ss_pred hhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCC-chHHHHHhhHHHHHHHHHHHhhcC
Q 013992 132 VGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPG-TWRWMLGVAGIPALLQFILMLLLP 210 (432)
Q Consensus 132 ~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~-~wr~~f~~~~~~~~~~~~~~~~~~ 210 (432)
.|...+ ...+-.+++-+..+++++.++.+...+..-.|...|..++..+.+... +.+..-++......+.....+++|
T Consensus 105 yG~~tA-aEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP 183 (433)
T KOG3810|consen 105 YGPATA-AEIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLP 183 (433)
T ss_pred cChHHH-HHHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCC
Confidence 888765 455667788888899999999999999999999999998888877532 234444444444445556677788
Q ss_pred CCHHHHHHcCCHHHHHHHHHHhCCCCchHHHHHHHHHHhHHHHHHccCccchhHHHhhcccchhHHHHHHHHHHHHhhhc
Q 013992 211 ESPRWLYRKGREEEAQAILRKVYPAHEVETEIRDLKESVDKEIEEEGSSEKINLVKLLKTRTVRRGLIAGVGLQVFQQFV 290 (432)
Q Consensus 211 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (432)
..+|...-+.++++.. .......+. +.+..+..+ .....-..+..+..++|++..-.++..+ ..+
T Consensus 184 ~v~rSl~f~~~~~~~~--v~~~e~~~~-~~~~~~~l~-------~~~~~l~~~l~~~y~np~ll~WSlWwAl-----~sc 248 (433)
T KOG3810|consen 184 RVKRSLYFHRLEDKIS--VGDLEEMNP-QASYMSYLR-------GAFVLLWRDLQECYSNPRLLKWSLWWAL-----ASC 248 (433)
T ss_pred CCchhhhhhcccccce--eccchhcCc-cchhhHHHH-------HHHHHHHHHHHHHhcCchhhhhHHHHHH-----hhc
Confidence 7765444333333211 000000000 000000000 0111112355677788887664444333 333
Q ss_pred chHHHHHhHHHHHHHc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCc
Q 013992 291 GINTVMYYSPTIVQLS-GFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRK 342 (432)
Q Consensus 291 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 342 (432)
+++.+..|.-..=++. .......-|..-....+.++++.+..|++.-++.|.
T Consensus 249 g~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~ 301 (433)
T KOG3810|consen 249 GYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRW 301 (433)
T ss_pred hhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchh
Confidence 6666666554443333 222223334444555666788888889886655554
No 239
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.30 E-value=4.6e-05 Score=67.85 Aligned_cols=145 Identities=17% Similarity=0.063 Sum_probs=85.7
Q ss_pred hHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhc-----cccchHHH
Q 013992 28 YVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMND-----RFGRRTSI 102 (432)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d-----r~Grr~~l 102 (432)
.....+..+.+.+.+++.-.+... .+|.+.+.=|.+..+. +...-++ .-+ -.-+++.++.| |+||||.-
T Consensus 28 ~d~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~---a~fS~ay-~P~-sLKllWaPiVDs~y~k~~GrrksW 101 (510)
T KOG3574|consen 28 GDRSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQ---AIFSFAY-WPF-SLKLLWAPIVDSVYSKRFGRRKSW 101 (510)
T ss_pred hhhhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhh---hhhhhhh-hHH-HHHHHHHhhhHHHHHHhhccccce
Confidence 334455556666788898888777 8899888666666555 3222211 111 23568889999 99999865
Q ss_pred HH-HHHHHHHHHHHHHH-----------hCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHH
Q 013992 103 LV-ADFLFFVGAVIMAA-----------APNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSG 170 (432)
Q Consensus 103 ~~-~~~~~~~~~~~~~~-----------~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g 170 (432)
+. +..+.+..+.+.+. .++...+....++.-+.++.--.+.-...-.+..+++-|.+......+...|
T Consensus 102 vvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~G 181 (510)
T KOG3574|consen 102 VVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAG 181 (510)
T ss_pred eeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhh
Confidence 43 33333333333332 1233334344455555555555555556666777777777777666666666
Q ss_pred HHHHHHHH
Q 013992 171 QFLSYLIN 178 (432)
Q Consensus 171 ~~i~~~i~ 178 (432)
..++..+-
T Consensus 182 yfL~~~if 189 (510)
T KOG3574|consen 182 YFLGNVVF 189 (510)
T ss_pred HHhhccee
Confidence 55555443
No 240
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.30 E-value=1.4e-05 Score=75.81 Aligned_cols=141 Identities=11% Similarity=0.044 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhhccccc-hHHHHHHHHHHHHHHHHHHHhCC---------------------hhHHHHHHh
Q 013992 73 SIVSMAVAGAIIGAAIGGWMNDRFGR-RTSILVADFLFFVGAVIMAAAPN---------------------PGALITGRV 130 (432)
Q Consensus 73 ~~~s~~~~~~~i~~~~~g~l~dr~Gr-r~~l~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~r~ 130 (432)
+....+.+...+.+++..++.+|+|+ |++...+.++.+++.....+.++ .+..++...
T Consensus 309 ~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (477)
T TIGR01301 309 FGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFA 388 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHH
Confidence 44444555555777788889999995 77778898888888777765432 366777888
Q ss_pred hhhccccchhhhHHHHHHhcCCcc--cchhHHHHHHHHHHHHHHHHHHHHhhccCCCC-chHHHHHhhHHHHHHHHHH-H
Q 013992 131 FVGLGVGMASMTSPLYISEASPAK--IRGALVSTNGFLITSGQFLSYLINLAFTRAPG-TWRWMLGVAGIPALLQFIL-M 206 (432)
Q Consensus 131 l~G~~~~~~~~~~~~~i~~~~~~~--~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~-~wr~~f~~~~~~~~~~~~~-~ 206 (432)
+.|+..+.....-.+++++..+++ +.|..+|+++.+..+.+++..+..+.+.+..+ +-.+.+.+.++..++..+. +
T Consensus 389 ~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~ 468 (477)
T TIGR01301 389 ILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLAL 468 (477)
T ss_pred HhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999954 45999999999999999999887777554433 3567888888888887777 6
Q ss_pred hhcCCCH
Q 013992 207 LLLPESP 213 (432)
Q Consensus 207 ~~~~e~~ 213 (432)
+.+|+++
T Consensus 469 ~~~~~~~ 475 (477)
T TIGR01301 469 ILLPRPR 475 (477)
T ss_pred HhCCCCC
Confidence 6677764
No 241
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.26 E-value=1.4e-05 Score=75.63 Aligned_cols=145 Identities=14% Similarity=-0.025 Sum_probs=90.6
Q ss_pred cchhhhhhh-hccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHH-----HhCChh
Q 013992 50 ISGALLYIR-DDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMA-----AAPNPG 123 (432)
Q Consensus 50 ~~~~~~~i~-~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~-----~~~~~~ 123 (432)
.....|.+. +.+|.+..+. ++.......+..++..+.+++.+|.++++.......+..++.++.. ..+++.
T Consensus 237 ~~~~~P~~l~~~~g~s~~~~---gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~ 313 (413)
T PRK15403 237 WVAVSPVILIDAGGMTTSQF---AWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWL 313 (413)
T ss_pred HHHhChHHHHHhcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHH
Confidence 333456554 4567887777 8777777778888888888876554444443332222223322222 123444
Q ss_pred HHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHH
Q 013992 124 ALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPAL 200 (432)
Q Consensus 124 ~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~ 200 (432)
..++..++.++|.+...+......- .-....+|++.++.+.....+...++..++++.+.. =++.|...++.+.
T Consensus 314 ~~~~~~~l~~~G~~~~~p~~~~~al-~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~ 387 (413)
T PRK15403 314 WSVLGTSLYAFGIGLIFPTLFRFTL-FSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNG--GRLPFHLLAVVAG 387 (413)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHh-ccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CchHHHHHHHHHH
Confidence 4567788888888888777764332 222334799999998888888888999988887663 3455554444333
No 242
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.16 E-value=4.5e-06 Score=76.45 Aligned_cols=134 Identities=17% Similarity=0.176 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcC
Q 013992 72 ESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEAS 151 (432)
Q Consensus 72 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~ 151 (432)
+.+.-+-.+-..+..+.+.+..+|+..+.=.....++..++.++.++++|.+.-+++-++.+++.|........+ +..+
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l-t~~y 140 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL-THFY 140 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH-HHhc
Confidence 334455556667777788888998875555566777888899999999999999999999999999888777776 4455
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCC-chHHHHHhhHHHHHHHHHHHh-hcCC
Q 013992 152 PAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPG-TWRWMLGVAGIPALLQFILML-LLPE 211 (432)
Q Consensus 152 ~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~-~wr~~f~~~~~~~~~~~~~~~-~~~e 211 (432)
++ ...+.++.+.+.+.++|+..-..+.+ .+ +-|..+.+..++.++..+.++ .+|+
T Consensus 141 ~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~ 197 (402)
T PF02487_consen 141 GK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPS 197 (402)
T ss_pred Cc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 54 34677778888888888887766666 32 247777777666555555544 4444
No 243
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.14 E-value=1.8e-05 Score=75.44 Aligned_cols=161 Identities=14% Similarity=0.061 Sum_probs=101.3
Q ss_pred HHHHHHHhhcccceeccccchhhhhhhhc-cccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcc----ccchHHHHHHH
Q 013992 32 LAFSAGIGGLLFGYDTGVISGALLYIRDD-FKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDR----FGRRTSILVAD 106 (432)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr----~Grr~~l~~~~ 106 (432)
.+...++..+......+.....+|.+.++ .|.+..+. +.+...+.++.+++.+++|+++|| ..+|.......
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a---~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~ 350 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQA---NLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFL 350 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHh---ccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 34555666677777777788888988877 45777777 889999999999999999999999 77777777766
Q ss_pred HHHHHHH-HHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccc-hhHHHHHHHHHHHHHHHHHH-HHhhccC
Q 013992 107 FLFFVGA-VIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIR-GALVSTNGFLITSGQFLSYL-INLAFTR 183 (432)
Q Consensus 107 ~~~~~~~-~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R-~~~~~~~~~~~~~g~~i~~~-i~~~l~~ 183 (432)
.++.+.. .......+.......-.....+.....+.+.....+......| -...+....+.+.+.++.+. ..+....
T Consensus 351 ~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap 430 (495)
T KOG2533|consen 351 CLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAP 430 (495)
T ss_pred HHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCc
Confidence 6665555 4444443344433333444444555566666677777765544 33344444444444444333 3333333
Q ss_pred CCCchHHHHHhhH
Q 013992 184 APGTWRWMLGVAG 196 (432)
Q Consensus 184 ~~~~wr~~f~~~~ 196 (432)
... |.+.|....
T Consensus 431 ~y~-~~~~f~~~~ 442 (495)
T KOG2533|consen 431 RYG-WGAVFYMLV 442 (495)
T ss_pred chh-hhhHHHHHH
Confidence 334 777774443
No 244
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.09 E-value=0.0058 Score=56.99 Aligned_cols=155 Identities=11% Similarity=0.017 Sum_probs=100.4
Q ss_pred ChhHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHH-HHHHHHHhhhhhhccccchHHHHH
Q 013992 26 NPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVA-GAIIGAAIGGWMNDRFGRRTSILV 104 (432)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~-~~~i~~~~~g~l~dr~Grr~~l~~ 104 (432)
+++.+..++.+.+..++..+..+ .+-.+.+.+..+........++-+...+ +..+..++..++.+++.|++++-.
T Consensus 22 ~r~E~~kflpl~Ll~f~I~~ny~----~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~ 97 (509)
T COG3202 22 RRYELKKFLPLALLFFCILFNYN----LLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYI 97 (509)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHH----HHHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHH
Confidence 34455556666555555554333 4455666666554444333677777777 677888999999999999999988
Q ss_pred HHHHHHHHHHHHHHh---------CC-----------------------hhHHHHHHhhhhccccchhh-hHHHHHHhcC
Q 013992 105 ADFLFFVGAVIMAAA---------PN-----------------------PGALITGRVFVGLGVGMASM-TSPLYISEAS 151 (432)
Q Consensus 105 ~~~~~~~~~~~~~~~---------~~-----------------------~~~~~~~r~l~G~~~~~~~~-~~~~~i~~~~ 151 (432)
-+..+....+++++. ++ .|...+...+.=+-...... .-.....|.+
T Consensus 98 ~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeit 177 (509)
T COG3202 98 ILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEIT 177 (509)
T ss_pred HHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 777777777777653 11 01111111111111111111 2334567888
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHHHHhhccCC
Q 013992 152 PAKIRGALVSTNGFLITSGQFLSYLINLAFTRA 184 (432)
Q Consensus 152 ~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~ 184 (432)
..+|-.|..++++.+.+++..++..+..++.+.
T Consensus 178 t~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 178 TIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred hHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 888889999999999999999988888888764
No 245
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.09 E-value=5.2e-06 Score=79.13 Aligned_cols=127 Identities=10% Similarity=-0.070 Sum_probs=82.9
Q ss_pred chHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhh-CCchhhHhHHHHHHHHHHHHHHHHhccCCC
Q 013992 291 GINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRT-GRKKLLVISLSGVILSLGVLSAVFHETTSH 369 (432)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (432)
.++....++|.|+++..+.++.+++...........++.+++|+++||+ |||+.+.++..+..++..++.... ....
T Consensus 24 s~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~--~~~~ 101 (493)
T PRK15462 24 SFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASE--IHPS 101 (493)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhh--cchh
Confidence 5677888899999887667788888888888888899999999999999 999999999888888776554321 1111
Q ss_pred CCccchhcccccccccccccccccccCccchhhhhccCCCCcccccccccccc
Q 013992 370 SPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCASHSNKVK 422 (432)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~~~~~~~ 422 (432)
...+.......+.+...+.......+.+|.- ++.|.+ +.++.++..+...
T Consensus 102 ~~~l~l~li~iG~G~~~~~~~alv~elfp~~-~~~R~s--gf~i~Y~~~nlG~ 151 (493)
T PRK15462 102 FLYLSLAIIVCGYGLFKSNVSCLLGELYEPT-DPRRDG--GFSLMYAAGNVGS 151 (493)
T ss_pred HHHHHHHHHHHhcccccccHHHHHHHHCCCC-Cccccc--eehHHHHHHHHHH
Confidence 1111111111111222222334445666541 125888 8888887777543
No 246
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.06 E-value=0.0024 Score=60.88 Aligned_cols=153 Identities=12% Similarity=0.046 Sum_probs=90.3
Q ss_pred hhHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHH-HHHHHHHhhhhhhccccchHHHHHH
Q 013992 27 PYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVA-GAIIGAAIGGWMNDRFGRRTSILVA 105 (432)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~-~~~i~~~~~g~l~dr~Grr~~l~~~ 105 (432)
+..+..+..+.+..++..+..+. +-.+.+.+=.+...+.....+=....+ ...+...+..+++||++|++++-..
T Consensus 20 ~~E~~k~~~l~~m~f~i~f~y~~----lR~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~ 95 (491)
T PF03219_consen 20 RSELKKFLPLALMFFFILFNYTI----LRDLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYII 95 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HHHhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 44555555555555555544432 233333332222222222444443333 3445577899999999999998777
Q ss_pred HHHHHHHHHHHHHh---------CC----------------------hhHHHHHHhhhhccccchhh-hHHHHHHhcCCc
Q 013992 106 DFLFFVGAVIMAAA---------PN----------------------PGALITGRVFVGLGVGMASM-TSPLYISEASPA 153 (432)
Q Consensus 106 ~~~~~~~~~~~~~~---------~~----------------------~~~~~~~r~l~G~~~~~~~~-~~~~~i~~~~~~ 153 (432)
...+.....++++. ++ .|.+.+..++.-+-.....+ .-..+..|.++.
T Consensus 96 ~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~ 175 (491)
T PF03219_consen 96 IIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTV 175 (491)
T ss_pred HHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Confidence 76666666555542 11 11111222222222222222 346678999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhhccC
Q 013992 154 KIRGALVSTNGFLITSGQFLSYLINLAFTR 183 (432)
Q Consensus 154 ~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~ 183 (432)
+|-.|..+++..+.++|.+++..+..++.+
T Consensus 176 ~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 176 EEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998888887776
No 247
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.01 E-value=4.1e-05 Score=64.88 Aligned_cols=98 Identities=15% Similarity=0.273 Sum_probs=74.3
Q ss_pred cchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHH
Q 013992 50 ISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGR 129 (432)
Q Consensus 50 ~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r 129 (432)
.+|.+.++-++++....+. +.+....+...++...+.|-++|+-|||+.-+.-++.+.+++ +.-.++++-.++++|
T Consensus 56 QgPYvYyLYstYgFgkG~I---gqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsC-iTKhSpqYkVLmVGR 131 (454)
T KOG4332|consen 56 QGPYVYYLYSTYGFGKGDI---GQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSC-ITKHSPQYKVLMVGR 131 (454)
T ss_pred cCceeeeeehhcCccCCcc---ceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHH-HhhcCCceEEEeehh
Confidence 4566677778888877777 777777777778888899999999999997555444444433 344578899999999
Q ss_pred hhhhccccchhhhHHHH-HHhcC
Q 013992 130 VFVGLGVGMASMTSPLY-ISEAS 151 (432)
Q Consensus 130 ~l~G~~~~~~~~~~~~~-i~~~~ 151 (432)
.+-|+..+..+..-.++ +.|.-
T Consensus 132 ~LGGiaTsLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 132 VLGGIATSLLFSAFESWLIAEHN 154 (454)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhh
Confidence 99999988887776654 66765
No 248
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.01 E-value=1.4e-05 Score=55.00 Aligned_cols=66 Identities=14% Similarity=0.285 Sum_probs=53.8
Q ss_pred cccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHH
Q 013992 41 LLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLF 109 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 109 (432)
+......+...|.+|...++.|.+..+. |.+.++..+...++++++|.++||+++++..+....++
T Consensus 10 f~~f~~~g~~~Pfl~~~~~~~Gl~~~~i---Gil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 10 FFYFAALGCLYPFLPLYLKQLGLSPSQI---GILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHhhhhHhhhhcCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 3334445556677777778888988888 99999999999999999999999999999887766554
No 249
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.99 E-value=0.0002 Score=70.22 Aligned_cols=131 Identities=24% Similarity=0.265 Sum_probs=98.3
Q ss_pred HHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhH---HHHHHhhhhccccchhhhHHHHHHhcCCcccch
Q 013992 81 GAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGA---LITGRVFVGLGVGMASMTSPLYISEASPAKIRG 157 (432)
Q Consensus 81 ~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~ 157 (432)
.........+...|++|||.....+..+..++.++.++..+... ..+...+...+.+..+.....+..|.+|+..|.
T Consensus 362 ~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~ 441 (521)
T KOG0255|consen 362 VELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRN 441 (521)
T ss_pred HHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHH
Confidence 45555566689999999999999999999999999998765443 455555555666666677788999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHH-HhhcCCCH
Q 013992 158 ALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFIL-MLLLPESP 213 (432)
Q Consensus 158 ~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~e~~ 213 (432)
.+.+..+....+|.+++|.+..........+.... .+....+..++ .+++||+.
T Consensus 442 ~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~lpet~ 496 (521)
T KOG0255|consen 442 TAVGAISAAARLGSILAPLFPLLLRQMFPLLGLIL--FGWLALLLGLLSLLLLPETK 496 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHH--HHHHHHHHHHHHHhcCcccC
Confidence 99999999999999999998866654322232222 34444444444 58899983
No 250
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.98 E-value=2.5e-05 Score=72.75 Aligned_cols=148 Identities=13% Similarity=0.067 Sum_probs=94.0
Q ss_pred HhhcccchhHHHHHHHHHHHHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhh
Q 013992 266 KLLKTRTVRRGLIAGVGLQVFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLL 345 (432)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 345 (432)
+++.+++.....+....+.. +...+.+++--++++.+.. +..-|......-.+.++..++.+++.+|+|+-+++
T Consensus 366 ~~~~s~~~llff~~av~mG~-----g~~lv~tFLfWHled~~~~-~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~ 439 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGA-----GVGLVFTFLFWHLEDLGGI-KTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVM 439 (618)
T ss_pred HHhcCCCEEehhHHHHHHHH-----HHHHHHHHHHHHHhhcCCc-ceeeeehhhhhccchHHHHHHHHHHHHHhccccee
Confidence 56666665543333333322 5556666665567776644 45556777777888899999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccccccccccccCccchhhhhccCCCCcccccccc-cccccc
Q 013992 346 VISLSGVILSLGVLSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCASHS-NKVKGI 424 (432)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~~~-~~~~g~ 424 (432)
.++..+..+=++.+... ++.|...-+-++-+...........+..+.+ .|+++|++ ++|+..... +...|+
T Consensus 440 ~lgLa~~~~Rf~~~S~L---~n~W~vLPieilqgit~aliWaa~~sY~s~v---aPp~l~at--~Q~l~~g~f~GlG~g~ 511 (618)
T KOG3762|consen 440 YLGLACNVGRFLYYSYL---QNPWMVLPIEILQGITHALIWAAIISYASHV---APPGLRAT--AQGLLQGIFHGLGKGL 511 (618)
T ss_pred eehhhHHHHHHHHHHHh---cCchheeeHHHHHHHHHHHHHHHHHHHHHhh---CCCcchHH--HHHHHHHHhcccCcch
Confidence 99888777766555443 4555555445555554444443333333444 44499999 888876544 555555
Q ss_pred ccc
Q 013992 425 SAI 427 (432)
Q Consensus 425 ~a~ 427 (432)
.++
T Consensus 512 Gsl 514 (618)
T KOG3762|consen 512 GSL 514 (618)
T ss_pred hhh
Confidence 543
No 251
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.93 E-value=4.3e-05 Score=73.96 Aligned_cols=184 Identities=18% Similarity=0.138 Sum_probs=125.9
Q ss_pred HHHHHHhhcccceeccccchhhhhhhh-ccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchH-HHHHHHHHHH
Q 013992 33 AFSAGIGGLLFGYDTGVISGALLYIRD-DFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRT-SILVADFLFF 110 (432)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~-~l~~~~~~~~ 110 (432)
+....+..++.+..........|.... -|+.+.......++....+.++..+++.+.|.+..+++|-| .++++.+++.
T Consensus 312 ~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~t 391 (599)
T PF06609_consen 312 FAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMT 391 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHH
Confidence 344444455555555555566666543 34433321111267777888888899999999998877554 4456776666
Q ss_pred HHHHHHHH--hCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccC-CC--
Q 013992 111 VGAVIMAA--APNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTR-AP-- 185 (432)
Q Consensus 111 ~~~~~~~~--~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~-~~-- 185 (432)
++.-+.+. .+|....+..-++.|++.|...........-..|+++-+.+.++....-.+|..+|..+..-+.. ..
T Consensus 392 a~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~n~~~~ 471 (599)
T PF06609_consen 392 AFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFTNKLPK 471 (599)
T ss_pred HHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhH
Confidence 55444433 34666667778899999999888888888888899988999999888888887777665532221 00
Q ss_pred -------------C---------------------------------------------chHHHHHhhHHHHHHHHHHHh
Q 013992 186 -------------G---------------------------------------------TWRWMLGVAGIPALLQFILML 207 (432)
Q Consensus 186 -------------~---------------------------------------------~wr~~f~~~~~~~~~~~~~~~ 207 (432)
+ .+|++|+....++++.++..+
T Consensus 472 ~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~iPGit~~i~~a~~~A~~~aYa~ay~~V~~~siaFG~vaiiaa~ 551 (599)
T PF06609_consen 472 ELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAIPGITPEIIAAVVAAFQEAYAHAYRYVYYSSIAFGVVAIIAAL 551 (599)
T ss_pred hHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 478899998888999998888
Q ss_pred hcCCCHHHH
Q 013992 208 LLPESPRWL 216 (432)
Q Consensus 208 ~~~e~~~~~ 216 (432)
+++|..++.
T Consensus 552 fl~d~~~~m 560 (599)
T PF06609_consen 552 FLGDIDKYM 560 (599)
T ss_pred HcCChHHhh
Confidence 888775543
No 252
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.81 E-value=0.00027 Score=48.67 Aligned_cols=65 Identities=14% Similarity=0.272 Sum_probs=53.5
Q ss_pred HHhhhcchHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHH
Q 013992 285 VFQQFVGINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLS 350 (432)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 350 (432)
++..+.+...+.-|.|.|+++.+.+ +.+.+.+..+..+..+++.++.|.++||.++++.......
T Consensus 9 yf~~f~~~g~~~Pfl~~~~~~~Gl~-~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~ 73 (77)
T PF12832_consen 9 YFFYFAALGCLYPFLPLYLKQLGLS-PSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSL 73 (77)
T ss_pred HHHHHHHHHHHHhhhhHhhhhcCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHH
Confidence 3455556778888999999986555 7888999999999999999999999999999887766544
No 253
>PTZ00207 hypothetical protein; Provisional
Probab=97.72 E-value=0.0008 Score=65.68 Aligned_cols=160 Identities=11% Similarity=0.027 Sum_probs=110.4
Q ss_pred chhhhhhhhcc-ccchhh-hHHHHHHHHHHHHHHHHHHHhhhhhhc---------cccchHHHHHHHHHHHHHHHHHHHh
Q 013992 51 SGALLYIRDDF-KSVDRK-TLLQESIVSMAVAGAIIGAAIGGWMND---------RFGRRTSILVADFLFFVGAVIMAAA 119 (432)
Q Consensus 51 ~~~~~~i~~~~-~~~~~~-~~~~~~~~s~~~~~~~i~~~~~g~l~d---------r~Grr~~l~~~~~~~~~~~~~~~~~ 119 (432)
..-+.+|.+.+ |.+.+. .. ....+++.+++.+|.+..|.+.. |+.|--.+.+..+ +.++.++.++.
T Consensus 373 ~~N~~qI~~sl~g~~~~~~~~--~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~ 449 (591)
T PTZ00207 373 IFNARFIYTALAGEAPDDALN--TLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLT 449 (591)
T ss_pred eecHHHHHHHhcCCCCCccce--eeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHH
Confidence 33445677777 552222 11 22677788888888888887761 1322223344444 77777777776
Q ss_pred CChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHH-HHHHhhccCCC----C--------
Q 013992 120 PNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLS-YLINLAFTRAP----G-------- 186 (432)
Q Consensus 120 ~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~-~~i~~~l~~~~----~-------- 186 (432)
-....+.+.-++.|++.|..++.....++|.|. |+-|+-..+......+|..+- -.+.|.+.|.. +
T Consensus 450 ~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~ 528 (591)
T PTZ00207 450 LPKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERV 528 (591)
T ss_pred CCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCce
Confidence 544789999999999999999999999999999 888988888888888888765 45666655431 1
Q ss_pred chHHHHHhhHHHHHHHHHHH-hhcCCCHH
Q 013992 187 TWRWMLGVAGIPALLQFILM-LLLPESPR 214 (432)
Q Consensus 187 ~wr~~f~~~~~~~~~~~~~~-~~~~e~~~ 214 (432)
=.|..|++.+..++...++. ...-++.+
T Consensus 529 C~~~~~~v~~~~~~~g~~~s~~l~~R~r~ 557 (591)
T PTZ00207 529 CVVMPLAFLLGLSFLAFITSTYVHLQYRR 557 (591)
T ss_pred eeHhHHHHHHHHHHHHHHHHhheeeehHH
Confidence 15788888888888887773 33334433
No 254
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.72 E-value=0.00045 Score=65.45 Aligned_cols=126 Identities=15% Similarity=0.156 Sum_probs=105.9
Q ss_pred hhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhh-hhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhh
Q 013992 54 LLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGG-WMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFV 132 (432)
Q Consensus 54 ~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g-~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 132 (432)
.-++...++.+..+. +...+.......+++.+.. .+...+|-|++...|+....+..++.+++++.|+......+.
T Consensus 265 ~~yl~~~f~w~~~~~---s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~ 341 (463)
T KOG2816|consen 265 LLYLKAKFGWNKKEF---SDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVV 341 (463)
T ss_pred EEEEeeecCcCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHH
Confidence 345666788888888 7677777777777777666 788889999999999999999999999999999999888877
Q ss_pred hccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccC
Q 013992 133 GLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTR 183 (432)
Q Consensus 133 G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~ 183 (432)
++. ....|...+.++.+.++++||+++++.+....+...+++.+-+.+..
T Consensus 342 ~~~-~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 342 ALA-GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred Hhh-cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 765 44778888999999999999999999999999999998888776644
No 255
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.42 E-value=0.001 Score=62.03 Aligned_cols=109 Identities=19% Similarity=0.347 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHHHHHHHHh--C-Ch------hHHHHHHhhhhccccchhhhHHHHHHhcCCcc---cchhHHHHHHHHH
Q 013992 100 TSILVADFLFFVGAVIMAAA--P-NP------GALITGRVFVGLGVGMASMTSPLYISEASPAK---IRGALVSTNGFLI 167 (432)
Q Consensus 100 ~~l~~~~~~~~~~~~~~~~~--~-~~------~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~R~~~~~~~~~~~ 167 (432)
|+++.+.+++.+|.++..++ + +. ..+.++-.+.++|.|..=|....+.+|-++++ +|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56788899999998884433 2 22 57888899999999999999999999999876 3567788899999
Q ss_pred HHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHHHhhc
Q 013992 168 TSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFILMLLL 209 (432)
Q Consensus 168 ~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 209 (432)
++|..++..+.+++.+..+ |.+.|.+.++..++..+.++.-
T Consensus 82 n~G~~~~~~~~~~i~~~~~-~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYG-WFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS--HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhccccc-hhhhhhHHHHHHHHHHHHHHhC
Confidence 9999999999999988877 9999999998777777665543
No 256
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.39 E-value=0.01 Score=54.35 Aligned_cols=171 Identities=16% Similarity=0.106 Sum_probs=80.9
Q ss_pred cccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHh-
Q 013992 41 LLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAA- 119 (432)
Q Consensus 41 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~- 119 (432)
+-.-..+..+..+.++..+++-..+.+..........-.+...+....-..+.-|. |+++.........+..+.+.++
T Consensus 28 iG~LlpWN~fiTa~~y~~~~~~~~~~~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~-~~~~~~~l~~~~il~i~~l~~~~ 106 (406)
T KOG1479|consen 28 IGTLLPWNMFITASDYYYYRFPGYHNSKNFTSSYTLAAQIPLLLFNLLNAFLNTRL-RTRVGYLLSLIAILFIVTLDLAL 106 (406)
T ss_pred cccccchHhhhccHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHh
Confidence 33445566667777777777654433332223333333444445555555666662 2222222211222222222221
Q ss_pred --------CChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHH
Q 013992 120 --------PNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWM 191 (432)
Q Consensus 120 --------~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~ 191 (432)
..+...++.-.+.+.+.+..........++ +|+|.-.-.++-.+.+..+-...--.......+...+=-..
T Consensus 107 v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ytqavm~G~a~aG~l~Sl~~i~tka~~~~~~~sA~~y 185 (406)
T KOG1479|consen 107 VKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYTQAVMSGQALAGTLTSLLRILTKAAFSDSRTSALIY 185 (406)
T ss_pred hccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHHHHHHhcchhHhHHHHHHHHHHHHhcCCCCceeehh
Confidence 235556666777888877766665554444 46554433333222222222222222222222222223345
Q ss_pred HHhhHHHHHHHHHHHhhcCCCH
Q 013992 192 LGVAGIPALLQFILMLLLPESP 213 (432)
Q Consensus 192 f~~~~~~~~~~~~~~~~~~e~~ 213 (432)
|.+..+..+++.+++..+|+.|
T Consensus 186 F~~s~~~~llC~i~y~~l~~lp 207 (406)
T KOG1479|consen 186 FITSTVILLLCFVLYLVLPKLP 207 (406)
T ss_pred HHHHHHHHHHHHHHHHHhhcch
Confidence 5555666667777777778776
No 257
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.34 E-value=0.0022 Score=59.94 Aligned_cols=133 Identities=17% Similarity=0.121 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccccch-------HHHHHHHHHHHHHHHHHHHh----------CChhHHHHHHhhhhc
Q 013992 72 ESIVSMAVAGAIIGAAIGGWMNDRFGRR-------TSILVADFLFFVGAVIMAAA----------PNPGALITGRVFVGL 134 (432)
Q Consensus 72 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr-------~~l~~~~~~~~~~~~~~~~~----------~~~~~~~~~r~l~G~ 134 (432)
++..+...+...+.+|+..++-.+.++| .=+-+++.+++.+.++.... .+.++++...+++++
T Consensus 327 ~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~ 406 (498)
T COG3104 327 AWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSF 406 (498)
T ss_pred HHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHH
Confidence 6777888888888888887777775544 12456666666666655443 257888999999999
Q ss_pred cccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhcc------CCCCchHHHHHhhHHHHHHHHHH
Q 013992 135 GVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFT------RAPGTWRWMLGVAGIPALLQFIL 205 (432)
Q Consensus 135 ~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~------~~~~~wr~~f~~~~~~~~~~~~~ 205 (432)
|.=+..|...++++...|++-.+..++.+......|+.++..+.+.-. +.. .-...|+..+...++..+.
T Consensus 407 gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~-~~~~~F~~~g~v~i~~~~~ 482 (498)
T COG3104 407 GELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAF-IEGRVFGTIGVVAIVIGIL 482 (498)
T ss_pred HHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhh-hhhhhHHHHHHHHHHHHHH
Confidence 999999999999999999998899999888888877777776666322 111 2455666666665555544
No 258
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.33 E-value=0.0014 Score=58.97 Aligned_cols=123 Identities=12% Similarity=0.096 Sum_probs=106.3
Q ss_pred hhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcccc--chHHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhhcc
Q 013992 58 RDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFG--RRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLG 135 (432)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 135 (432)
.+.+|.++.|. |-+.+...+...+.+....+..||.. -+-.+..++.++.=..++.+.++....+.++-.+-.+.
T Consensus 289 ~~rfg~ss~~~---G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~ 365 (451)
T KOG2615|consen 289 HGRFGYSSMQQ---GKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFS 365 (451)
T ss_pred cCccCCChhhh---eeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHH
Confidence 36688888887 88888888888888888999999987 77777788888777777888888888888888888888
Q ss_pred ccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccC
Q 013992 136 VGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTR 183 (432)
Q Consensus 136 ~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~ 183 (432)
.+...+....++....|+++||...|+......++-++||+++|.+..
T Consensus 366 ~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 366 TASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred HHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 888888888899999999999999999999999999999999987764
No 259
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=97.29 E-value=0.0096 Score=55.74 Aligned_cols=143 Identities=16% Similarity=0.085 Sum_probs=71.4
Q ss_pred HHHHhhcccceeccccchhhhhhhhc--cccchhhhHHHHHHHHHHHHHHHHHHHhhhhhh-----ccccchHHHHH-HH
Q 013992 35 SAGIGGLLFGYDTGVISGALLYIRDD--FKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMN-----DRFGRRTSILV-AD 106 (432)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~-----dr~Grr~~l~~-~~ 106 (432)
++.+.++++|.-.+.....+|.+.++ -+.+..+. +.. +.-..-+. .-+++.++. .|+||||.-++ .-
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~---~~f-Sla~~PfS-lKlLWaPiVDs~y~~~~GRRKSWiiP~Q 78 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQ---AIF-SLASYPFS-LKLLWAPIVDSVYSKRIGRRKSWIIPIQ 78 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCCChhHh---eee-eeeechhH-HHHhhhhhhhhhcccccCCcchhhhHHH
Confidence 44556678888777665677888777 45565554 211 11111111 123455554 48999997654 22
Q ss_pred HHHHHHHHHHHHhC----------------------Chh--HHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHH
Q 013992 107 FLFFVGAVIMAAAP----------------------NPG--ALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVST 162 (432)
Q Consensus 107 ~~~~~~~~~~~~~~----------------------~~~--~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~ 162 (432)
.+.++..+..+..- +.. .+....++.-+-++.--.+.-...-.+..+++++.+...
T Consensus 79 ~l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTc 158 (544)
T PF13000_consen 79 YLSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTC 158 (544)
T ss_pred HHHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHH
Confidence 33333322222111 111 122222222222222222222344455577778888777
Q ss_pred HHHHHHHHHHHHHHHHhhcc
Q 013992 163 NGFLITSGQFLSYLINLAFT 182 (432)
Q Consensus 163 ~~~~~~~g~~i~~~i~~~l~ 182 (432)
...+.+.|..++..+--.+.
T Consensus 159 qtvG~~~Gyfls~tvFlaln 178 (544)
T PF13000_consen 159 QTVGQTAGYFLSFTVFLALN 178 (544)
T ss_pred HHhHhhhhHHHHHHHHHhhC
Confidence 77777777766665544444
No 260
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=97.24 E-value=0.13 Score=45.63 Aligned_cols=99 Identities=15% Similarity=0.204 Sum_probs=64.8
Q ss_pred HHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCc--ccc-
Q 013992 80 AGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPA--KIR- 156 (432)
Q Consensus 80 ~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~--~~R- 156 (432)
+..+.++++.+.+..++|-|+++.++...+... +..-+-+.+..++-.-.+.|++.+..+..--+|++++-.. ++|
T Consensus 69 ~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~ly-iA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~~ 147 (390)
T KOG3097|consen 69 LSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALY-IAANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQRG 147 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH-HHhhcchhHHhhccHHHhhccccccccccCcceecHHHHHHHHhhh
Confidence 344455666668899999999998887766543 2223346778888889999999998887766666555432 222
Q ss_pred ------------hhHHHHHHHHHHHHHHHHHHHHh
Q 013992 157 ------------GALVSTNGFLITSGQFLSYLINL 179 (432)
Q Consensus 157 ------------~~~~~~~~~~~~~g~~i~~~i~~ 179 (432)
+....+++....+|..+...+..
T Consensus 148 ~q~~~~~~~~ffg~Ffii~~~~qv~gn~issli~~ 182 (390)
T KOG3097|consen 148 EQAGDGMKVRFFGEFFIIFQCAQVWGNLISSLIMT 182 (390)
T ss_pred hhccCceeeeehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555666666555554443
No 261
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.24 E-value=0.0058 Score=59.68 Aligned_cols=157 Identities=15% Similarity=0.267 Sum_probs=119.9
Q ss_pred cccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccc-cchHHHHHHHHHHHHHHHHHHHhC------
Q 013992 48 GVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRF-GRRTSILVADFLFFVGAVIMAAAP------ 120 (432)
Q Consensus 48 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~------ 120 (432)
+.....+.++..+++.....+ .-..+.+.-......+.++.++|-| ||-+++.++.++..++.++..++.
T Consensus 55 g~~~nlv~ylt~~~~~~~~~a---a~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~ 131 (571)
T KOG1237|consen 55 GLVSNLVTYLTLELHASGGGA---ANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALL 131 (571)
T ss_pred cchhHHHHHHHHHhccchHHH---HHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence 335677788889998877666 6677777777778889999999965 888999999988888866543321
Q ss_pred ----------------C---hhHHHHHHhhhhccccchhhhHHHHHHhcCC---ccc-c--hhHHHHHHHHHHHHHHHHH
Q 013992 121 ----------------N---PGALITGRVFVGLGVGMASMTSPLYISEASP---AKI-R--GALVSTNGFLITSGQFLSY 175 (432)
Q Consensus 121 ----------------~---~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~---~~~-R--~~~~~~~~~~~~~g~~i~~ 175 (432)
+ ...+..+..+..+|.|+.-+...++-+|-++ +++ + ...+.++....+.|..++.
T Consensus 132 p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~ 211 (571)
T KOG1237|consen 132 PFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQ 211 (571)
T ss_pred CccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHH
Confidence 1 1245566677888999999999999999988 322 2 4678888899999999999
Q ss_pred HHHhhccCCCCchHHHHHhhHHHHHHHHHHHhh
Q 013992 176 LINLAFTRAPGTWRWMLGVAGIPALLQFILMLL 208 (432)
Q Consensus 176 ~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 208 (432)
.+..+.-+..+ |.+.|.+..+..++++++++.
T Consensus 212 t~~vyiq~~~~-w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 212 TVLVYIQDNVG-WKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred HHHHhhhhccc-ceeeccHHHHHHHHHHHHHHc
Confidence 99888877776 999998888776666655443
No 262
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.13 E-value=0.0029 Score=58.36 Aligned_cols=139 Identities=16% Similarity=0.097 Sum_probs=89.5
Q ss_pred HHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHH--HHH
Q 013992 35 SAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLF--FVG 112 (432)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~--~~~ 112 (432)
.+++.++..+..+..+.+.+.. ..++....++. .+....|.+|..++.--...+ |+ |++.+.+.+-. .+.
T Consensus 251 PL~lVY~aEY~InqGv~~tl~f-p~~~~~~r~~Y---~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~ 322 (402)
T PF02487_consen 251 PLFLVYFAEYFINQGVAPTLLF-PNSFFSPRDQY---RWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVF 322 (402)
T ss_pred HHHHHHHHHHHHHhchHHHhcC-CccCCCHHHHH---HHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHH
Confidence 3445555555443333332211 12232233344 667777777766665432221 33 33333332222 222
Q ss_pred ---HHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhc
Q 013992 113 ---AVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAF 181 (432)
Q Consensus 113 ---~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l 181 (432)
....-+.++.|..++.-+..|+..|..+......+.|-.|+++|..+++..+.+-++|..++.+++-.+
T Consensus 323 ~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 323 LLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 222344688999889999999999999999999999999999999999999999999999998887654
No 263
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.06 E-value=0.0052 Score=58.16 Aligned_cols=132 Identities=12% Similarity=0.060 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHH-HH----h---CChhHHHHHHhhhhccccchhhhHHHHHH
Q 013992 77 MAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIM-AA----A---PNPGALITGRVFVGLGVGMASMTSPLYIS 148 (432)
Q Consensus 77 ~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~-~~----~---~~~~~~~~~r~l~G~~~~~~~~~~~~~i~ 148 (432)
...+...+..+..-.+..|+..|.=+..++++..+..++. .+ . ..++..++.-++.|++.+........+.+
T Consensus 53 ~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv~~~~~~~~~~~l~~~~~~~~~~f~~~~~~v~~~g~~~~~~q~s~~gla~ 132 (437)
T TIGR00939 53 ASQLPSLLFNSLNLFLIFRIPVTVRLLGGLVILLVVVILVMVLVKVQTSETGFFVTTMASVVIINSGMALLQGSLFGLAG 132 (437)
T ss_pred HHHHHHHHHHHHHHHHhhccCccchhHHHHHHHHHHHHHHhheeeecCCcchHHHHHHHHHHHHHhhhhhhcccchhhcc
Confidence 3334444444555555566664322333433222222221 11 1 13556666778888888877777766555
Q ss_pred hcCCcccchhHHHHHHHHHHHHHHHHHHHH----hhccCCC-CchH--HHHHhhHHHHHHHHHHHhhcCCCH
Q 013992 149 EASPAKIRGALVSTNGFLITSGQFLSYLIN----LAFTRAP-GTWR--WMLGVAGIPALLQFILMLLLPESP 213 (432)
Q Consensus 149 ~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~----~~l~~~~-~~wr--~~f~~~~~~~~~~~~~~~~~~e~~ 213 (432)
.+|++.- ..+..+.+++++++.++. ....+.. ..++ ..|.+..+..++.++.+..+++.|
T Consensus 133 -~fp~~~~----~a~~~G~g~aGv~~s~~~ii~~a~~~~~~~~~~~a~~YF~~a~~v~l~~i~~~~~l~k~~ 199 (437)
T TIGR00939 133 -VFPSTYS----SAVMSGQGLAGVLTSLAMILVKASGNDSHGLKKSALGYFGTPCVVQLICIVCYLLLPKLP 199 (437)
T ss_pred -cCCHHHH----HHHHhcchhHHHHHHHHHHHHHHhcCCccchhhhhhhHHHHHHHHHHHHHHHHHHHhcCH
Confidence 5665433 333334444444333322 1122210 1122 234444455556666666777776
No 264
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.03 E-value=0.023 Score=53.54 Aligned_cols=103 Identities=15% Similarity=0.224 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHhhhhhh---ccccchHHHHHHHHHHHHHHHHHHHh------------------CChhHHHHHHhhhhcc
Q 013992 77 MAVAGAIIGAAIGGWMN---DRFGRRTSILVADFLFFVGAVIMAAA------------------PNPGALITGRVFVGLG 135 (432)
Q Consensus 77 ~~~~~~~i~~~~~g~l~---dr~Grr~~l~~~~~~~~~~~~~~~~~------------------~~~~~~~~~r~l~G~~ 135 (432)
...+|..++..+.+.+. +++||++.+.++..+..++.++.-.. +++....+.-+++|++
T Consensus 287 ~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~ 366 (461)
T KOG3098|consen 287 GIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFG 366 (461)
T ss_pred HHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhH
Confidence 33444555555566666 56899999999999998888877542 2455667777999999
Q ss_pred ccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhh
Q 013992 136 VGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLA 180 (432)
Q Consensus 136 ~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~ 180 (432)
.+......+.++.+.. +++|..+.++...-..++..++......
T Consensus 367 D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 367 DACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred HHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 9999999999999999 5668999999888888887776655443
No 265
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.85 E-value=0.022 Score=54.16 Aligned_cols=147 Identities=12% Similarity=0.138 Sum_probs=100.7
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHH----------hCChhHHHHHHhhh
Q 013992 63 SVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAA----------APNPGALITGRVFV 132 (432)
Q Consensus 63 ~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~----------~~~~~~~~~~r~l~ 132 (432)
.++... +.+..+..++..++..+..+..-+..-|+++..+.++..+..+.-.. .++.+-.+.--++.
T Consensus 252 fs~~f~---~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~ 328 (433)
T PF03092_consen 252 FSPSFY---GTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILE 328 (433)
T ss_pred cCHHHH---HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHH
Confidence 444444 77777788888888889988888888899988888777666553211 12222222333555
Q ss_pred hccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCC-------chHHHHHhhHHHHHHHHHH
Q 013992 133 GLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPG-------TWRWMLGVAGIPALLQFIL 205 (432)
Q Consensus 133 G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~-------~wr~~f~~~~~~~~~~~~~ 205 (432)
.+.....+-+...+++|..|+..-|...++.....++|..++..++..+.+..+ +-.+..++..+..++.+.+
T Consensus 329 ~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~l 408 (433)
T PF03092_consen 329 EVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPL 408 (433)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHH
Confidence 555566666677889999999999999999999999999888888887766433 1234444555555555555
Q ss_pred HhhcCCC
Q 013992 206 MLLLPES 212 (432)
Q Consensus 206 ~~~~~e~ 212 (432)
..++|+.
T Consensus 409 l~lLp~~ 415 (433)
T PF03092_consen 409 LFLLPPQ 415 (433)
T ss_pred HHHcCCC
Confidence 6667775
No 266
>PRK03612 spermidine synthase; Provisional
Probab=96.78 E-value=0.046 Score=53.15 Aligned_cols=138 Identities=14% Similarity=0.022 Sum_probs=78.5
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHH-HHHHHH-HHHHH----HHHhCCh-hHHHHHHhhhh
Q 013992 61 FKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILV-ADFLFF-VGAVI----MAAAPNP-GALITGRVFVG 133 (432)
Q Consensus 61 ~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~-~~~~~~-~~~~~----~~~~~~~-~~~~~~r~l~G 133 (432)
+|.+..+. +.+.+++++|.++|+.+++++.++--|+...+- ...+.+ ++..+ .++.... ..+...-++.+
T Consensus 45 ~G~s~~~~---~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ 121 (521)
T PRK03612 45 LGDSVTQF---STVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIG 121 (521)
T ss_pred hCchHHHH---HHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45444444 999999999999999999988744333322111 111111 11111 1111111 11223345567
Q ss_pred ccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccC-CCCchHHHHHhhHHHHHHH
Q 013992 134 LGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTR-APGTWRWMLGVAGIPALLQ 202 (432)
Q Consensus 134 ~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~-~~~~wr~~f~~~~~~~~~~ 202 (432)
+..|+..|....+..+... ++-++..|-......+|.++|.++.+++.- ..+..+..+.+..+..+++
T Consensus 122 ~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a 190 (521)
T PRK03612 122 LLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAA 190 (521)
T ss_pred HHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 7777777777666654332 223566778888888999999888876654 4554566555544433333
No 267
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=96.61 E-value=0.0073 Score=51.59 Aligned_cols=54 Identities=17% Similarity=0.416 Sum_probs=36.2
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhhccC------CCCchHHHHHhhHHHHHHHHHHHhhc
Q 013992 154 KIRGALVSTNGFLITSGQFLSYLINLAFTR------APGTWRWMLGVAGIPALLQFILMLLL 209 (432)
Q Consensus 154 ~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~------~~~~wr~~f~~~~~~~~~~~~~~~~~ 209 (432)
|+|+....+...+..+|.++.... ++.+ ...+|++.+.+.+++.++-++++.++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ip--F~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIP--FLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhh--HHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 567777777777888888764433 2222 12269999999998877777765555
No 268
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=96.54 E-value=0.0012 Score=62.04 Aligned_cols=119 Identities=11% Similarity=-0.101 Sum_probs=81.5
Q ss_pred HHHhHHHHHHHcCCCchhH-HHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHHHHHHHHHHhccCCCCCcc
Q 013992 295 VMYYSPTIVQLSGFASNRT-ALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILSLGVLSAVFHETTSHSPMV 373 (432)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (432)
..+..|.+.+ ..+.+..+ .+.+...+..+-.+..+++|++.||+|.|+++..+.+...+..+++.+... ...+.+
T Consensus 45 ~s~a~p~L~~-elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~S---l~~L~i 120 (511)
T TIGR00806 45 ESFITPYLLT-VLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTS---VWHMQL 120 (511)
T ss_pred HHHHHHHHHH-HcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH---HHHHHH
Confidence 3334454444 44555666 888889999999999999999999999999999999988888888777532 233333
Q ss_pred chhcccccccccccccccccccCccchhhhhccCCCCccccccccccccc
Q 013992 374 SAVETSHFSNLTCPDYSSAATADRWDCMKCLKASSPDCGFCASHSNKVKG 423 (432)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~~~~~~~g 423 (432)
.=++.|.+-+... .+. ..++..+|++.|++ ++|+..+....+..
T Consensus 121 ~R~llGvaEA~~~-A~~---syI~~WfP~kER~r--atsi~~sg~~vG~~ 164 (511)
T TIGR00806 121 MEVFYSVTMAARI-AYS---SYIFSLVPPSRYQR--AAAYSRAAVLLGVF 164 (511)
T ss_pred HHHHHHHHHHHHH-HHH---HHHHHHCCHHHHHH--HHHHHHHHHHHHHH
Confidence 3444444433333 223 33344566699999 88888766655443
No 269
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=96.54 E-value=0.0012 Score=60.82 Aligned_cols=114 Identities=14% Similarity=-0.057 Sum_probs=80.2
Q ss_pred HHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHHHHHHHHHHhccCCCCCccchhccccccc
Q 013992 304 QLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILSLGVLSAVFHETTSHSPMVSAVETSHFSN 383 (432)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (432)
++..+.++...+++.....+...+..++.|++.||++|++++.+|..+..++.+...+..+ .|.+.+.=.+.|.+-.
T Consensus 60 ~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~---Fwq~~l~R~~vGiGeA 136 (493)
T KOG1330|consen 60 QTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNH---FWQVLLCRGFVGIGEA 136 (493)
T ss_pred HHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHH---HHHHHHHHHHhccchh
Confidence 4445666788899999999999999999999999999999999999999998888877633 2333332233333322
Q ss_pred ccccccccccccCccchhhhhccCCCCccccccccccccccc
Q 013992 384 LTCPDYSSAATADRWDCMKCLKASSPDCGFCASHSNKVKGIS 425 (432)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~g~~~~~~~~~~g~~ 425 (432)
...+... +-+....|+..|++ ..|+-+-......|++
T Consensus 137 s~~~ia~---s~IaD~f~~~~Rs~--~~~ify~~ipvGsglG 173 (493)
T KOG1330|consen 137 SYSPIAP---SLIADSFPDDKRSR--VLGIFYFAIPVGSGLG 173 (493)
T ss_pred hhcccch---hHhhhcCcchhhhH--HHHHhhhhccccccee
Confidence 3333333 33445556699999 8888776666655544
No 270
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=96.32 E-value=0.0068 Score=52.38 Aligned_cols=75 Identities=21% Similarity=0.098 Sum_probs=59.1
Q ss_pred chHHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHHHHHHHHHHhccC
Q 013992 291 GINTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILSLGVLSAVFHETT 367 (432)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (432)
..+.+..|.|..-+ ..+.++.+...+.....++..+| ++.|.+.|+.|.+.++.++.+...++..++........
T Consensus 17 t~Y~Fs~yS~~Lk~-~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i 91 (250)
T PF06813_consen 17 TTYTFSAYSPQLKS-RLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRI 91 (250)
T ss_pred cccchhhhhHHHHH-HhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 45666667666655 45566888888888888888775 78899999999999999999999999988877765543
No 271
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=95.99 E-value=0.00069 Score=52.87 Aligned_cols=92 Identities=13% Similarity=0.034 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHHHHHHHHHHhccCCCCCccchhcccccccccccccccccccCccch
Q 013992 321 TSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILSLGVLSAVFHETTSHSPMVSAVETSHFSNLTCPDYSSAATADRWDC 400 (432)
Q Consensus 321 ~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (432)
..++.+++.++.+++.||++||+.+..+.....++...+... .+.+......+..+.......+.......+. .
T Consensus 7 ~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~ 80 (141)
T TIGR00880 7 YALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS---SNITVLIIARFLQGFGAAFALVAGAALIADI---Y 80 (141)
T ss_pred ehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhHHHHHHHH---C
Confidence 456678889999999999999999988877777666555442 2222222223333333222222222223344 4
Q ss_pred hhhhccCCCCcccccccccc
Q 013992 401 MKCLKASSPDCGFCASHSNK 420 (432)
Q Consensus 401 ~~~~r~~~~~~g~~~~~~~~ 420 (432)
|++.|++ ..|+.....+.
T Consensus 81 ~~~~~~~--~~~~~~~~~~~ 98 (141)
T TIGR00880 81 PPEERGV--ALGLMSAGIAL 98 (141)
T ss_pred ChhhhhH--HHHHHHHhHHH
Confidence 4488888 77777655443
No 272
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=95.73 E-value=0.0049 Score=61.61 Aligned_cols=68 Identities=21% Similarity=-0.049 Sum_probs=53.7
Q ss_pred HHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHHHHHHHHH
Q 013992 294 TVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILSLGVLSAV 362 (432)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (432)
......+.+-++ .+.+..+.+++.....++.+++.++.+++.||.+||+++.++.++.+++.++.++.
T Consensus 51 ~~~~~l~~iek~-F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alp 118 (633)
T TIGR00805 51 LVNSSLTTIERR-FKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLP 118 (633)
T ss_pred HHHhhchhhhhh-hCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhCh
Confidence 333334444444 44556778888888999999999999999999999999999999999998887665
No 273
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=95.62 E-value=0.19 Score=45.52 Aligned_cols=51 Identities=22% Similarity=-0.026 Sum_probs=42.8
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHHHH
Q 013992 307 GFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILSLG 357 (432)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 357 (432)
.+.+..+...++........+...+.|.+.||+|||+..+...++..++++
T Consensus 64 yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl 114 (354)
T PF05631_consen 64 YGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL 114 (354)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 455577788888888888999999999999999999988887777777664
No 274
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.62 E-value=0.13 Score=48.50 Aligned_cols=128 Identities=16% Similarity=0.228 Sum_probs=88.8
Q ss_pred hhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHH---hC-------Ch
Q 013992 53 ALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAA---AP-------NP 122 (432)
Q Consensus 53 ~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~~-------~~ 122 (432)
.+......-|.++... |..-+...+....+.....++.+|+|..|.=+++.........++.. .+ +.
T Consensus 280 lmt~yl~~~G~s~~~i---gi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~ 356 (432)
T PF06963_consen 280 LMTAYLKSQGYSPSVI---GIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISA 356 (432)
T ss_pred HHHHHHHHCCCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHH
Confidence 3333333348877777 88999999999999999999999999999888877665544444332 22 12
Q ss_pred hHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccC
Q 013992 123 GALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTR 183 (432)
Q Consensus 123 ~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~ 183 (432)
..++.+-.+.=+|.=..-....-++.|..|+++||...+......++-.++-..++-.+.+
T Consensus 357 ~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~~ 417 (432)
T PF06963_consen 357 YLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFPR 417 (432)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 2233232333333333445566788999999999999999999998888887777655443
No 275
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=95.46 E-value=0.043 Score=50.80 Aligned_cols=148 Identities=14% Similarity=0.066 Sum_probs=84.9
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccc-hHHHHHHHHHHHHHHHHHHH----hCChhHHHHHHhhhhccc
Q 013992 62 KSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGR-RTSILVADFLFFVGAVIMAA----APNPGALITGRVFVGLGV 136 (432)
Q Consensus 62 ~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Gr-r~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~r~l~G~~~ 136 (432)
|.++... |.+.....++.++++.+.|.+.||... |++.+.......++...... ..+.+.+...-.+.|.+.
T Consensus 297 gY~~~~a---G~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~ 373 (480)
T KOG2563|consen 297 GYEGVFA---GYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFG 373 (480)
T ss_pred cCCcccc---chhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhh
Confidence 3344455 889999999999999999999999863 44455555554444322221 123344555567778888
Q ss_pred cchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCC--chHH-HHHhhHHHHHHHHHHHhhcCCC
Q 013992 137 GMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPG--TWRW-MLGVAGIPALLQFILMLLLPES 212 (432)
Q Consensus 137 ~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~--~wr~-~f~~~~~~~~~~~~~~~~~~e~ 212 (432)
....|...-+-.|..-|..-+...|+......+-..+-.++.+...+..+ +|.+ .-+.....+++..++..+++|.
T Consensus 374 ~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~ 452 (480)
T KOG2563|consen 374 TGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPD 452 (480)
T ss_pred cCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhh
Confidence 88888888777776554444555565544433333333444444443322 2333 3333444444444554455443
No 276
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=95.14 E-value=0.32 Score=33.97 Aligned_cols=70 Identities=14% Similarity=0.018 Sum_probs=55.0
Q ss_pred HHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHHHHHHHHHH
Q 013992 293 NTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILSLGVLSAVF 363 (432)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (432)
+.+.-.+|...++. ..+..+++.+.....++-++|.+...++.++.++++.+..+.+...+..+.+.+..
T Consensus 9 FayTplLP~M~~~~-~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 9 FAYTPLLPLMQADG-GLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred HHHHhHhHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444566666654 55588899999999999999999999999887778888888888888777776653
No 277
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=94.95 E-value=0.041 Score=52.12 Aligned_cols=82 Identities=12% Similarity=0.020 Sum_probs=63.8
Q ss_pred hHHHHHH-hhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHH
Q 013992 123 GALITGR-VFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALL 201 (432)
Q Consensus 123 ~~~~~~r-~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~ 201 (432)
+.+++.+ ++.|.+.-.......++-+|...+++++.+.+.++.....+..++|++........+ .|+...+.+...++
T Consensus 388 ~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g-~~~v~~~~~~~~l~ 466 (488)
T KOG2325|consen 388 ILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSG-PRPVWIILLCLLLV 466 (488)
T ss_pred hhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcC-ccHHHHHHHHHHHH
Confidence 3344544 556777776777788889999999999999999999999999999999888877776 78877776665555
Q ss_pred HHHH
Q 013992 202 QFIL 205 (432)
Q Consensus 202 ~~~~ 205 (432)
...+
T Consensus 467 ~~~l 470 (488)
T KOG2325|consen 467 VAAL 470 (488)
T ss_pred HHHH
Confidence 4444
No 278
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=94.88 E-value=0.35 Score=45.96 Aligned_cols=111 Identities=10% Similarity=0.034 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhccccch--HHHHHH--HHHHHHHHHHHHHh---------CChhHHHHHHhhhhcc
Q 013992 69 LLQESIVSMAVAGAIIGAAIGGWMNDRFGRR--TSILVA--DFLFFVGAVIMAAA---------PNPGALITGRVFVGLG 135 (432)
Q Consensus 69 ~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr--~~l~~~--~~~~~~~~~~~~~~---------~~~~~~~~~r~l~G~~ 135 (432)
+..-....++.++-.+|..+..+.. .-++| ++++.+ =+++.-..++|..- ++-+..++.-++.|+.
T Consensus 307 ~~~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~glt 385 (437)
T TIGR00939 307 FYPIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFS 385 (437)
T ss_pred HHHHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHh
Confidence 4456788888888888888665431 11222 333322 22233333344322 4556677789999999
Q ss_pred ccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhh
Q 013992 136 VGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLA 180 (432)
Q Consensus 136 ~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~ 180 (432)
.|-....+..+..+..++++|..+..+...+..+|..+|..++-.
T Consensus 386 nGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~ 430 (437)
T TIGR00939 386 NGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFL 430 (437)
T ss_pred hhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998888888888888877543
No 279
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=93.57 E-value=0.015 Score=52.54 Aligned_cols=20 Identities=15% Similarity=0.112 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 013992 316 LLSLVTSGLNAAGSIVSIYF 335 (432)
Q Consensus 316 ~~~~~~~~~~~~~~~~~g~l 335 (432)
.....+.++..+|+.+.++.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~ 205 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWP 205 (309)
T ss_dssp --------------------
T ss_pred HHHHHHHHHHHhcchhccee
Confidence 35667888899999988875
No 280
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=92.85 E-value=0.03 Score=54.65 Aligned_cols=150 Identities=13% Similarity=0.160 Sum_probs=0.0
Q ss_pred HHHHHHHhhcccceeccccchhhhh-hhhccccchhhhHHHHHHHHHHHH-HHHHHHHhhhhhhcccc--chHHHHHHHH
Q 013992 32 LAFSAGIGGLLFGYDTGVISGALLY-IRDDFKSVDRKTLLQESIVSMAVA-GAIIGAAIGGWMNDRFG--RRTSILVADF 107 (432)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~s~~~~-~~~i~~~~~g~l~dr~G--rr~~l~~~~~ 107 (432)
.+....++..........+...+|. +..+|+.+..++ +++.+...+ +.++|.+++|.+..|+. .|+.+....+
T Consensus 306 ~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A---~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v 382 (539)
T PF03137_consen 306 VFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQA---SLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIV 382 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHH
Confidence 4445555555555555556666664 667899988887 666655555 67899999999999884 4444444443
Q ss_pred HHHHHHHHHH---H-----------h----------------------------------------CChhHHHHHHhhhh
Q 013992 108 LFFVGAVIMA---A-----------A----------------------------------------PNPGALITGRVFVG 133 (432)
Q Consensus 108 ~~~~~~~~~~---~-----------~----------------------------------------~~~~~~~~~r~l~G 133 (432)
...++.++.. + . +++..+++..++.-
T Consensus 383 ~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~ 462 (539)
T PF03137_consen 383 VSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILS 462 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHH
Confidence 3333332200 0 0 01223334434444
Q ss_pred ccccchhhhHHHHHHhcCCcccchhHHHHHHHH-HHHHHHHHHHHHhhccCC
Q 013992 134 LGVGMASMTSPLYISEASPAKIRGALVSTNGFL-ITSGQFLSYLINLAFTRA 184 (432)
Q Consensus 134 ~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~-~~~g~~i~~~i~~~l~~~ 184 (432)
+..+.........+-...|+++|+.++|+.... -.+|.+-||++-|.++|.
T Consensus 463 ~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 463 FFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp ----------------------------------------------------
T ss_pred HHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 444444555555666788999999999997655 455777888888888875
No 281
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=92.06 E-value=3.5 Score=38.32 Aligned_cols=125 Identities=14% Similarity=0.110 Sum_probs=80.5
Q ss_pred hhhhhhhccccchh-hhHHHHHHHHH-HHHHHHHHHHhhhhhhccccchHHHHHHHHHHH-HHH-HHH------HHhCCh
Q 013992 53 ALLYIRDDFKSVDR-KTLLQESIVSM-AVAGAIIGAAIGGWMNDRFGRRTSILVADFLFF-VGA-VIM------AAAPNP 122 (432)
Q Consensus 53 ~~~~i~~~~~~~~~-~~~~~~~~~s~-~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~-~~~-~~~------~~~~~~ 122 (432)
+.|.+..+-.-++. +.|+.-....+ +.+.-.+|.+.+.++-++= ||+..+..+.=.. +-. .+| ..-.+-
T Consensus 265 iFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~-~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~ 343 (406)
T KOG1479|consen 265 IFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWPD-PRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESD 343 (406)
T ss_pred ecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCCC-CceehHHHHHHHHHHHHHHHhccCCCCceecCc
Confidence 34555444332222 34555666666 8888888877776665543 4443333222111 111 111 123567
Q ss_pred hHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 013992 123 GALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLIN 178 (432)
Q Consensus 123 ~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~ 178 (432)
+.+++.-.+.|+..|=.....+.+..+-.|++++..+-.+.......|...|..++
T Consensus 344 ~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 344 GWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred hHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 77888899999999988888888889999999888887777777777777777664
No 282
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=91.84 E-value=2.5 Score=39.56 Aligned_cols=102 Identities=13% Similarity=0.118 Sum_probs=75.8
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchHHH--HHHHHHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhh
Q 013992 65 DRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRTSI--LVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMT 142 (432)
Q Consensus 65 ~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 142 (432)
+....+.|.+-++..+..+++.+..|++-.++.+..-+ ....++.+...+++++++|.+...++.++.+...-...+.
T Consensus 281 ~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTi 360 (412)
T PF01770_consen 281 DNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITI 360 (412)
T ss_pred CCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444458888999999999999999997777764433 3344455566667788999999999998888777777777
Q ss_pred HHHHHHhcCCcccchhHHHHHHHH
Q 013992 143 SPLYISEASPAKIRGALVSTNGFL 166 (432)
Q Consensus 143 ~~~~i~~~~~~~~R~~~~~~~~~~ 166 (432)
+..-++.....+.-+..+|+....
T Consensus 361 A~~qIA~~l~~e~yaLVFGiNtf~ 384 (412)
T PF01770_consen 361 ASFQIAKNLSEERYALVFGINTFV 384 (412)
T ss_pred HHHHHHHhccccceeeeeeeHHHH
Confidence 777777777766668777765543
No 283
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=90.78 E-value=0.083 Score=47.78 Aligned_cols=107 Identities=17% Similarity=0.251 Sum_probs=3.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcc-ccchHHHHHH--HHHHHHHHHHHH----------HhCChhHHHHHHhhhhccccch
Q 013992 73 SIVSMAVAGAIIGAAIGGWMNDR-FGRRTSILVA--DFLFFVGAVIMA----------AAPNPGALITGRVFVGLGVGMA 139 (432)
Q Consensus 73 ~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~--~~~~~~~~~~~~----------~~~~~~~~~~~r~l~G~~~~~~ 139 (432)
.....+.++-.+|....++.-=+ -.+|++.+.+ =+++.-..++|. ..+|-+.+++.-++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 46677888888888877764211 1345444332 122222222331 2235566777889999999999
Q ss_pred hhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHh
Q 013992 140 SMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINL 179 (432)
Q Consensus 140 ~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~ 179 (432)
...++.+..+..++++|..+..+......+|..+|..++-
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp -HHHH-----------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988888888888888887776654
No 284
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=90.78 E-value=5 Score=34.76 Aligned_cols=101 Identities=15% Similarity=0.095 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhc-cccchHHHH----HHHHHHHHHHHHHHH-hC----ChhHHHHHHhhhhccccchhh
Q 013992 72 ESIVSMAVAGAIIGAAIGGWMND-RFGRRTSIL----VADFLFFVGAVIMAA-AP----NPGALITGRVFVGLGVGMASM 141 (432)
Q Consensus 72 ~~~~s~~~~~~~i~~~~~g~l~d-r~Grr~~l~----~~~~~~~~~~~~~~~-~~----~~~~~~~~r~l~G~~~~~~~~ 141 (432)
....-.+..|..+|....|+... ++.||+.+. .+.+++.++.++... .. +...+.+.-++.|++.=+..+
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 44555666777788788888875 455666443 334444444444212 21 245566666777765433344
Q ss_pred hHHHHHHhcCCcccchhHHHHHHHHHHHHHHH
Q 013992 142 TSPLYISEASPAKIRGALVSTNGFLITSGQFL 173 (432)
Q Consensus 142 ~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i 173 (432)
......-| ++..++.+.--.++..+++|.++
T Consensus 224 ViL~lPhE-yK~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 224 VILNLPHE-YKGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred HHhcChhh-hcCCCcceehhHHHHHHHHHHHH
Confidence 43333333 33333333334445556665543
No 285
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=90.36 E-value=0.29 Score=38.97 Aligned_cols=69 Identities=10% Similarity=0.041 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHHHHHHHHHHhccCCCCCccchhccccccccccccc
Q 013992 317 LSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILSLGVLSAVFHETTSHSPMVSAVETSHFSNLTCPDY 389 (432)
Q Consensus 317 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (432)
-..+......+..++.+.+.+++|.|+.++++.....+-....... ..+.+.....+.|+.....+...
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~----~~~~l~~~s~l~G~~~a~lW~aq 110 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYP----NSYTLYPASALLGFGAALLWTAQ 110 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhh----hHHHHHHHHHHHhhhhHHhhHhh
Confidence 3344445567777888999999999999999988877654443221 23344555666666655544433
No 286
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=89.90 E-value=4.1 Score=35.52 Aligned_cols=133 Identities=15% Similarity=0.178 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccccch--HHHHHHHHHHHHHHHHHHH----hC---ChhHHHHHHhhhhccccchhhh
Q 013992 72 ESIVSMAVAGAIIGAAIGGWMNDRFGRR--TSILVADFLFFVGAVIMAA----AP---NPGALITGRVFVGLGVGMASMT 142 (432)
Q Consensus 72 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr--~~l~~~~~~~~~~~~~~~~----~~---~~~~~~~~r~l~G~~~~~~~~~ 142 (432)
|.+.+.+++..++|+-+..++..|-..| ..+.+..++.++...+... ++ +...-+++.++.-.+.|..+|.
T Consensus 285 GfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPS 364 (454)
T KOG4332|consen 285 GFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPS 364 (454)
T ss_pred hhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchH
Confidence 8899999999999999998888776544 4455555554444433322 22 2223345556666678889999
Q ss_pred HHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHH
Q 013992 143 SPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFIL 205 (432)
Q Consensus 143 ~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 205 (432)
.+.+=+++.|.+.|+..+.++..-...-..++-.. -...+...+-|..|-++.....+..+.
T Consensus 365 imkmRsqyIPEearstimNfFRvPLnifvClvLyn-lh~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 365 IMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYN-LHVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred HHHHHHhhCCHHHHhhhhhheechhhHhhhhhhee-cccccCccccchhhhhhHHHHHHHHHH
Confidence 99999999999999988887765444322221110 001111113567777777655555443
No 287
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=85.16 E-value=6.9 Score=35.58 Aligned_cols=117 Identities=15% Similarity=0.179 Sum_probs=83.6
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHhhhhhhccccchH--HHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhhccccchhh
Q 013992 64 VDRKTLLQESIVSMAVAGAIIGAAIGGWMNDRFGRRT--SILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASM 141 (432)
Q Consensus 64 ~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~ 141 (432)
++....+.|..-++..+..+++.+..|.+--++.|.. .+..+.+..+...++++.++++|...++.++.+.-.....+
T Consensus 266 ~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~it 345 (433)
T KOG3810|consen 266 PNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTIT 345 (433)
T ss_pred CCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhh
Confidence 3444444477777888888899999999988777663 44455666666667788889999988888888777777778
Q ss_pred hHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccC
Q 013992 142 TSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTR 183 (432)
Q Consensus 142 ~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~ 183 (432)
.+..-+++....+.-|..+|+.... +.++-.++.....|
T Consensus 346 iA~~~iA~nL~~e~~gLvFGiNTFv---Al~lQsilT~iVvd 384 (433)
T KOG3810|consen 346 IATFQIARNLSSELFGLVFGINTFV---ALILQSILTLIVVD 384 (433)
T ss_pred HHHHHHHHhhhhhhheeeeehHHHH---HHHHHHhheEEEEc
Confidence 8888888888888778888876543 33333444444455
No 288
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=85.14 E-value=0.7 Score=43.24 Aligned_cols=130 Identities=15% Similarity=-0.037 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcC
Q 013992 72 ESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEAS 151 (432)
Q Consensus 72 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~ 151 (432)
.|-..++.+...+.+....++.||+|-|+.++.+...+.++.-+.+...+.......|-..|+-.+.....-...++++.
T Consensus 335 ~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~ 414 (498)
T KOG0637|consen 335 CLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYA 414 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHH
Confidence 45555677777788999999999999888888888778888888888888888888888888655555444434333322
Q ss_pred ---------------------Cc--ccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHH
Q 013992 152 ---------------------PA--KIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALL 201 (432)
Q Consensus 152 ---------------------~~--~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~ 201 (432)
.+ .-+|...++.+....+-+++.....|.+.+..++=+.+-+..+..++.
T Consensus 415 ~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s~~ 487 (498)
T KOG0637|consen 415 ILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVALL 487 (498)
T ss_pred HhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHHHH
Confidence 11 123566666777777777766666666666555445554444444443
No 289
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=83.88 E-value=4.5 Score=40.79 Aligned_cols=70 Identities=13% Similarity=-0.071 Sum_probs=49.3
Q ss_pred HHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhh-hCCchhhHhHHHHHHHHHHHHHHH
Q 013992 293 NTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDR-TGRKKLLVISLSGVILSLGVLSAV 362 (432)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~ 362 (432)
+++...+..|+....+.++..+...........-+..+++|+++|+ +|+++.+.++.++..++..++.+.
T Consensus 4 YGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~ 74 (654)
T TIGR00926 4 YGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFG 74 (654)
T ss_pred eecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 3444444556555555555555556565666667778899999996 699999999998888888777653
No 290
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=83.62 E-value=25 Score=29.54 Aligned_cols=38 Identities=18% Similarity=0.144 Sum_probs=19.7
Q ss_pred hcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 013992 149 EASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPG 186 (432)
Q Consensus 149 ~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~ 186 (432)
|+...++|.+.-........++..+|..++..+.+..+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~ 190 (209)
T PF06912_consen 153 RYLRGKDRALRRALRYLLIILSFFIGAILGALLYRRLG 190 (209)
T ss_pred HHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44444444333344444555566666666666655544
No 291
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=79.18 E-value=8.7 Score=34.31 Aligned_cols=71 Identities=20% Similarity=0.177 Sum_probs=57.9
Q ss_pred HHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhh
Q 013992 110 FVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLA 180 (432)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~ 180 (432)
.+...+..+.++++...+.-+.-|+-.|..+....--+.+-.++++|-.+++....+-++|..++.+++-.
T Consensus 330 f~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalp 400 (409)
T KOG3880|consen 330 FLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALP 400 (409)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhcc
Confidence 33444556788999988899999998888888888778888888999999999999888888887776643
No 292
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=75.35 E-value=54 Score=28.39 Aligned_cols=34 Identities=12% Similarity=0.066 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHH
Q 013992 322 SGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILS 355 (432)
Q Consensus 322 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 355 (432)
.++..+..+.+-+++.|+..|++.+.+..++.+.
T Consensus 250 ~lCT~lAVigGk~lAskIS~rtVt~~ggi~Fi~F 283 (294)
T KOG2881|consen 250 ALCTGLAVIGGKYLASKISVRTVTLIGGILFIIF 283 (294)
T ss_pred HHHHHHHHhhhHHHhhhheeEEEEEecchhHHHH
Confidence 3444555555556788888888777766655543
No 293
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=70.84 E-value=41 Score=29.39 Aligned_cols=62 Identities=26% Similarity=0.179 Sum_probs=41.2
Q ss_pred HHHHhHHHHHHHcCCCch-hHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHH
Q 013992 294 TVMYYSPTIVQLSGFASN-RTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILS 355 (432)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 355 (432)
......+.+..+...... ...+.......+...++.++.|.+.||.|||+.+..+......+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~ 82 (338)
T COG0477 20 LLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLG 82 (338)
T ss_pred hHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHH
Confidence 333445555555544432 35566667777778888899999999999997777766553333
No 294
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=69.99 E-value=18 Score=26.34 Aligned_cols=37 Identities=27% Similarity=0.339 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccc-cchHHHHHHHHH
Q 013992 72 ESIVSMAVAGAIIGAAIGGWMNDRF-GRRTSILVADFL 108 (432)
Q Consensus 72 ~~~~s~~~~~~~i~~~~~g~l~dr~-Grr~~l~~~~~~ 108 (432)
.+-.+.-+++..+.....|++.||| |-++..++..++
T Consensus 45 a~klssefIsGilVGa~iG~llD~~agTsPwglIv~ll 82 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLL 82 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 4555666677777777889999997 555544443333
No 295
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=67.62 E-value=7.3 Score=34.75 Aligned_cols=136 Identities=13% Similarity=0.076 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHHhcC
Q 013992 72 ESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYISEAS 151 (432)
Q Consensus 72 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~ 151 (432)
|.+.-.-.+-..+..+......||+.--.=.....++.+.+.++.+++++.++-+++-.+..++.|.....-..+ +..+
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~l-ss~Y 143 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLAL-SSRY 143 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhh-hccC
Confidence 334444445566667777778888653333455566777788888999999999999988888877665554443 3333
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCC-chHHHHHhhHHHHHHHHHH-HhhcCCC
Q 013992 152 PAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPG-TWRWMLGVAGIPALLQFIL-MLLLPES 212 (432)
Q Consensus 152 ~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~-~wr~~f~~~~~~~~~~~~~-~~~~~e~ 212 (432)
|+. ..+.++.+.+....+|..--..+.+..+ +-|...++...+-++.... ++.++++
T Consensus 144 ~~~----~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~p 202 (409)
T KOG3880|consen 144 PSI----VIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSP 202 (409)
T ss_pred CCc----eeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCC
Confidence 333 2333444444445555555555554211 2455555555444444444 4445443
No 296
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=66.41 E-value=46 Score=30.87 Aligned_cols=122 Identities=15% Similarity=0.056 Sum_probs=67.0
Q ss_pred HHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHH------------hCChhHHHHHHhhhhccccch--hhhHHHH-
Q 013992 82 AIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAA------------APNPGALITGRVFVGLGVGMA--SMTSPLY- 146 (432)
Q Consensus 82 ~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~------------~~~~~~~~~~r~l~G~~~~~~--~~~~~~~- 146 (432)
..+..++.|...|+..|+|++...+.+.-++...++- +.+...+..+..+.-...+.. ...+..+
T Consensus 76 ~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~ 155 (503)
T KOG2601|consen 76 QLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTIL 155 (503)
T ss_pred HHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEE
Confidence 4566677888899999999998887776555554432 235555555544433221111 1111111
Q ss_pred -HHhcC----CcccchhHH---HHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHH
Q 013992 147 -ISEAS----PAKIRGALV---STNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFI 204 (432)
Q Consensus 147 -i~~~~----~~~~R~~~~---~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~ 204 (432)
-.||. ..+.+.... +..-..--.-..+.|.+.+.+....+ -|..-.+.+...++...
T Consensus 156 i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvs-l~~~~g~f~~w~~vsm~ 220 (503)
T KOG2601|consen 156 IERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVS-LRASAGTFAAWALVSMW 220 (503)
T ss_pred ecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceeec-hhhhhhhhHHHHHHHHH
Confidence 12332 233344333 33333334456788888888887766 67655555555555433
No 297
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=66.26 E-value=1.1e+02 Score=28.21 Aligned_cols=78 Identities=17% Similarity=0.154 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHH-----HHHHHh----CChhHHHHHHhhhhccccchhhh
Q 013992 72 ESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGA-----VIMAAA----PNPGALITGRVFVGLGVGMASMT 142 (432)
Q Consensus 72 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~-----~~~~~~----~~~~~~~~~r~l~G~~~~~~~~~ 142 (432)
+.+.+.|.+...+|+...-++.|.--.-+.+..-.++..++. +-..|+ ++-+.+.+.-++.|.-.|.-.|.
T Consensus 46 S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~LVG~EiPL 125 (508)
T COG4262 46 SLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVLVGAEIPL 125 (508)
T ss_pred HHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHHHhcchHH
Confidence 889999999999999999888875433322222222211111 111233 35567777888899989999999
Q ss_pred HHHHHHh
Q 013992 143 SPLYISE 149 (432)
Q Consensus 143 ~~~~i~~ 149 (432)
.+.++..
T Consensus 126 ~mrml~~ 132 (508)
T COG4262 126 LMRMLQR 132 (508)
T ss_pred HHHHHHH
Confidence 9888766
No 298
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=66.19 E-value=1.3e+02 Score=29.12 Aligned_cols=71 Identities=14% Similarity=0.155 Sum_probs=49.5
Q ss_pred hhhhccccchhhhHHHHHHhcCC-cccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHH
Q 013992 130 VFVGLGVGMASMTSPLYISEASP-AKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALL 201 (432)
Q Consensus 130 ~l~G~~~~~~~~~~~~~i~~~~~-~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~ 201 (432)
++.|+........--..+.|.+| +++|+..++-++...++...+..++++.+.+..| |+....+.-+..++
T Consensus 274 i~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~G-w~~~a~i~Pii~li 345 (472)
T TIGR00769 274 IAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYG-WLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHH
Confidence 34455555555555566777777 4567888888888877777677777788888887 99877766555444
No 299
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=62.10 E-value=87 Score=30.84 Aligned_cols=12 Identities=0% Similarity=-0.006 Sum_probs=7.7
Q ss_pred hhHHHhhcccch
Q 013992 262 INLVKLLKTRTV 273 (432)
Q Consensus 262 ~~~~~~~~~~~~ 273 (432)
....+++|.|+-
T Consensus 249 lvhgDVFR~P~~ 260 (521)
T PF02990_consen 249 LVHGDVFRPPKH 260 (521)
T ss_pred hhhHHHhcCcCC
Confidence 344577888773
No 300
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=59.58 E-value=67 Score=23.51 Aligned_cols=36 Identities=17% Similarity=0.129 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHhhh-CCchhhHhHHHHHHHHHHHHH
Q 013992 325 NAAGSIVSIYFIDRT-GRKKLLVISLSGVILSLGVLS 360 (432)
Q Consensus 325 ~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~ 360 (432)
+++-....||+.||+ +.+++-.+.+.+...+...+.
T Consensus 55 GilVGa~iG~llD~~agTsPwglIv~lllGf~AG~ln 91 (116)
T COG5336 55 GILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVLN 91 (116)
T ss_pred HHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH
Confidence 344445678999987 556665555555544444333
No 301
>COG3619 Predicted membrane protein [Function unknown]
Probab=59.15 E-value=1.1e+02 Score=26.05 Aligned_cols=27 Identities=15% Similarity=0.335 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccccc
Q 013992 72 ESIVSMAVAGAIIGAAIGGWMNDRFGR 98 (432)
Q Consensus 72 ~~~~s~~~~~~~i~~~~~g~l~dr~Gr 98 (432)
........+..+++......+..|..|
T Consensus 58 a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 58 AVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 555666666677775555555555554
No 302
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=58.57 E-value=1.7e+02 Score=27.95 Aligned_cols=42 Identities=10% Similarity=-0.178 Sum_probs=28.0
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHH
Q 013992 152 PAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPA 199 (432)
Q Consensus 152 ~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~ 199 (432)
.+.+.+...++++.+.+.|...-|...+. .|-+...+..+++
T Consensus 18 ~~~d~~W~l~l~GTAIGAGmLfLPI~~g~------~Gf~p~lillll~ 59 (443)
T PRK13629 18 RKSDTTWTLGLFGTAIGAGVLFFPIRAGF------GGLIPILLMLVLA 59 (443)
T ss_pred ccccchHHHHHHHHHHhHHHHHHHHHHhc------chHHHHHHHHHHH
Confidence 44556778888888888888888887764 3555554444433
No 303
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=49.61 E-value=99 Score=22.46 Aligned_cols=31 Identities=13% Similarity=0.060 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHhhhCCchhhHhHHHHHHHHH
Q 013992 326 AAGSIVSIYFIDRTGRKKLLVISLSGVILSL 356 (432)
Q Consensus 326 ~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 356 (432)
++|.+++-|+-++++..+.+.+.+++..++.
T Consensus 57 l~G~~lG~WLD~~~~t~~~~tl~~lllGv~~ 87 (100)
T TIGR02230 57 LLGVAVGIWLDRHYPSPFSWTLTMLIVGVVI 87 (100)
T ss_pred HHHHHHHHHHHhhcCCCcHHHHHHHHHHHHH
Confidence 3444444444445665554444444444433
No 304
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=48.73 E-value=2.7e+02 Score=27.22 Aligned_cols=70 Identities=13% Similarity=0.178 Sum_probs=45.5
Q ss_pred hhhccccchhhhHHHHHHhcCCc-ccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHH
Q 013992 131 FVGLGVGMASMTSPLYISEASPA-KIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALL 201 (432)
Q Consensus 131 l~G~~~~~~~~~~~~~i~~~~~~-~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~ 201 (432)
..|+........--..+.+.+|. +++...+|-++...++-..+-.++++.+.+..| |+..-.+.-+..++
T Consensus 291 ~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~G-W~~~AlitPiv~li 361 (491)
T PF03219_consen 291 AYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFG-WRTAALITPIVILI 361 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHhHHHHHH
Confidence 34444444444444556677774 455777777777777666666788888888887 99877665443333
No 305
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=45.52 E-value=2.3e+02 Score=25.46 Aligned_cols=80 Identities=15% Similarity=0.262 Sum_probs=41.4
Q ss_pred hhHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhhcc---ccchHHHH
Q 013992 27 PYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMNDR---FGRRTSIL 103 (432)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr---~Grr~~l~ 103 (432)
+++....+.+.+++++.-+..+..+..+.-+.+.++...+.. ++..+.. ...+..+-.++ ||.||.=+
T Consensus 21 ~r~l~~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~---al~lal~------A~~~a~r~~~~~~TfGy~R~ei 91 (296)
T COG1230 21 ERRLLIALLLNLAFMLIEIIGGLLTGSLALLADALHMLSDAL---ALLLALI------AIKLARRPATKRFTFGYKRLEI 91 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHHHHHHHHH---HHHHHHH------HHHHhcCCCCCCCCccHhHHHH
Confidence 344444444445555444444445555556666666554444 4443332 23344444444 78888766
Q ss_pred HHHHHHHHHHHH
Q 013992 104 VADFLFFVGAVI 115 (432)
Q Consensus 104 ~~~~~~~~~~~~ 115 (432)
.+.+..++..+.
T Consensus 92 Laa~~nav~Li~ 103 (296)
T COG1230 92 LAAFLNALLLIV 103 (296)
T ss_pred HHHHHHHHHHHH
Confidence 665555554443
No 306
>COG2119 Predicted membrane protein [Function unknown]
Probab=43.94 E-value=1.5e+02 Score=24.35 Aligned_cols=36 Identities=17% Similarity=0.398 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHH
Q 013992 78 AVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGA 113 (432)
Q Consensus 78 ~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 113 (432)
..+..+++...+.++++|+..|++-..+.+++.+..
T Consensus 143 ~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fa 178 (190)
T COG2119 143 MILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFA 178 (190)
T ss_pred HHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHH
Confidence 445677778888899999999998887776665544
No 307
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=42.70 E-value=17 Score=30.80 Aligned_cols=53 Identities=9% Similarity=0.098 Sum_probs=37.0
Q ss_pred HHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhc
Q 013992 128 GRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAF 181 (432)
Q Consensus 128 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l 181 (432)
.-.-.|+|.+.+...+..-+.+.+|. ......++....+.+....|..+.-++
T Consensus 177 LAMasGvGSgSMMaAa~~aL~~~~P~-~a~~i~A~AaaSNllt~~~G~Y~~ifi 229 (241)
T PF11299_consen 177 LAMASGVGSGSMMAAASGALAAAYPE-MADQILAFAAASNLLTSVTGLYMSIFI 229 (241)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHCcc-hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34457889999999998889999975 456666666666666666665554443
No 308
>COG4769 Predicted membrane protein [Function unknown]
Probab=41.70 E-value=38 Score=26.94 Aligned_cols=54 Identities=20% Similarity=0.080 Sum_probs=37.4
Q ss_pred HHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhhcccc
Q 013992 78 AVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPNPGALITGRVFVGLGVG 137 (432)
Q Consensus 78 ~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~ 137 (432)
+.+...+.+...-++..++|+|.+-++|.. ...++.+|..++++.+++.+-...
T Consensus 82 ~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS------~mGaF~hNl~QLivas~Lv~~~~v 135 (181)
T COG4769 82 YSFAGAILSTLFMYFLYQFGPKYLSLLGIS------VMGAFTHNLGQLIVASFLVFTTSV 135 (181)
T ss_pred HHHHHHHHHHHHHHHHHHcCCceEeeeehh------hHHHHHHhHHHHHHHHHHHhcchH
Confidence 334455556666778889998887555543 345678999999999988875433
No 309
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=39.60 E-value=55 Score=32.58 Aligned_cols=64 Identities=14% Similarity=0.162 Sum_probs=53.9
Q ss_pred ChhHHHHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCC
Q 013992 121 NPGALITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRA 184 (432)
Q Consensus 121 ~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~ 184 (432)
|..+++--.++.|++.........-+.-+-+|++.|+.+.+++.....+|..+...+.......
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~ 520 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFS 520 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4555666679999999998888888888899999999999999999999999988888655443
No 310
>COG0861 TerC Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism]
Probab=39.18 E-value=2.7e+02 Score=24.41 Aligned_cols=58 Identities=10% Similarity=-0.038 Sum_probs=35.1
Q ss_pred cchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHH
Q 013992 137 GMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGI 197 (432)
Q Consensus 137 ~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~ 197 (432)
|.-.....+++.+.+|+++|-|+.-+--.+..+=-.+.-..+.++.+. |.+.+...+.
T Consensus 31 ~iDN~iviai~~~~Lp~~qr~ral~~Gl~~A~v~R~~ll~~~s~Ll~l---~~~l~~~fg~ 88 (254)
T COG0861 31 GIDNAIVIAILASKLPPKQRKKALFIGLAGALVLRIILLASISWLLTL---TQPLLYIFGL 88 (254)
T ss_pred HhhHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hHHHHHHHHH
Confidence 445667778899999998887775543233333333344445555543 7777777444
No 311
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=38.12 E-value=1.6e+02 Score=23.43 Aligned_cols=31 Identities=19% Similarity=0.161 Sum_probs=21.5
Q ss_pred HHHHHHhcCCcccchhHHHHHHHHHHHHHHH
Q 013992 143 SPLYISEASPAKIRGALVSTNGFLITSGQFL 173 (432)
Q Consensus 143 ~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i 173 (432)
.+-+++--+++++.|..+|+-.+-.+++.+.
T Consensus 115 sYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 115 SYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 3445566667777798888888777776554
No 312
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=37.89 E-value=2.3e+02 Score=23.32 Aligned_cols=58 Identities=10% Similarity=0.058 Sum_probs=33.0
Q ss_pred hhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHH
Q 013992 139 ASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPA 199 (432)
Q Consensus 139 ~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~ 199 (432)
-.....+.+.+..|+++|.++.-+-..+..+--.+.-..+.++.+. |.|..++.++..
T Consensus 13 DN~~vi~~~~~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~---~~~i~~igG~~L 70 (183)
T PF03741_consen 13 DNAFVIAMIFRKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLLSI---FPWILLIGGLFL 70 (183)
T ss_pred hHHHHHHHHHhCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Confidence 3445556777889998887776543333333344444555555533 456666555543
No 313
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=37.33 E-value=2.8e+02 Score=24.23 Aligned_cols=16 Identities=6% Similarity=-0.031 Sum_probs=9.3
Q ss_pred hHHHHHhHHHHHHHcC
Q 013992 292 INTVMYYSPTIVQLSG 307 (432)
Q Consensus 292 ~~~~~~~~~~~~~~~~ 307 (432)
.++.++.-..|.++..
T Consensus 194 lyGs~fvPv~Yi~~~~ 209 (254)
T PF07857_consen 194 LYGSNFVPVIYIQDHP 209 (254)
T ss_pred HHhcccchHHHHHhCc
Confidence 3455555566777664
No 314
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=35.37 E-value=70 Score=23.40 Aligned_cols=49 Identities=8% Similarity=0.072 Sum_probs=37.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHHHHHHH
Q 013992 312 RTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILSLGVLS 360 (432)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 360 (432)
.+.+-.....+..-++.+++.++..|+..+.+.=.++..++.++..++.
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~ 102 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIIL 102 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheE
Confidence 4467777778888899999999999998887777777776666665443
No 315
>PRK02237 hypothetical protein; Provisional
Probab=35.19 E-value=1.1e+02 Score=22.49 Aligned_cols=48 Identities=15% Similarity=0.205 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHHHHHHH
Q 013992 313 TALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILSLGVLS 360 (432)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 360 (432)
+.+-.....+..-++.+++.++..|+...-+.=.++..++.++..++.
T Consensus 57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~ 104 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIM 104 (109)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhe
Confidence 467778888888899999999999998877776677776766665543
No 316
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=33.48 E-value=1.4e+02 Score=23.59 Aligned_cols=25 Identities=24% Similarity=0.295 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHhhhhhhccccchH
Q 013992 76 SMAVAGAIIGAAIGGWMNDRFGRRT 100 (432)
Q Consensus 76 s~~~~~~~i~~~~~g~l~dr~Grr~ 100 (432)
.-|.+|+.+...+.|++.+|..+++
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccc
Confidence 4577888889999999999988763
No 317
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=32.00 E-value=4e+02 Score=26.16 Aligned_cols=59 Identities=12% Similarity=0.050 Sum_probs=42.3
Q ss_pred HHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCC
Q 013992 126 ITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRA 184 (432)
Q Consensus 126 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~ 184 (432)
++.-++..+.....+....++-+.+.+|..=|..|.+.+...++|..-...+.-++.|.
T Consensus 409 I~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 409 IIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY 467 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence 33446666777777888888889999999999999999888888764444444344433
No 318
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=29.93 E-value=4e+02 Score=23.68 Aligned_cols=36 Identities=19% Similarity=0.305 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHh-CChhHHHHHHhhhhccccc
Q 013992 103 LVADFLFFVGAVIMAAA-PNPGALITGRVFVGLGVGM 138 (432)
Q Consensus 103 ~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~~~ 138 (432)
+.+++++++++++..+. ++.+.+.+.-++.+++.++
T Consensus 3 ~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~m 39 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGM 39 (284)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 44555555555555554 4555555555666655543
No 319
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=29.68 E-value=4.9e+02 Score=24.94 Aligned_cols=19 Identities=16% Similarity=0.235 Sum_probs=8.0
Q ss_pred HHHHHHHHHHHHHHHHHhC
Q 013992 102 ILVADFLFFVGAVIMAAAP 120 (432)
Q Consensus 102 l~~~~~~~~~~~~~~~~~~ 120 (432)
+++|+.+...-.++.+++.
T Consensus 329 ~LVGlAl~lFYlLLLSlSE 347 (430)
T PF06123_consen 329 LLVGLALVLFYLLLLSLSE 347 (430)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 3444444444444444443
No 320
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=29.57 E-value=1.9e+02 Score=20.28 Aligned_cols=40 Identities=15% Similarity=0.222 Sum_probs=27.3
Q ss_pred HHHHHhhhhhhccccc-------hHHHHHHHHHHHHHHHHHHHhCCh
Q 013992 83 IIGAAIGGWMNDRFGR-------RTSILVADFLFFVGAVIMAAAPNP 122 (432)
Q Consensus 83 ~i~~~~~g~l~dr~Gr-------r~~l~~~~~~~~~~~~~~~~~~~~ 122 (432)
....+.++++..|.-+ ++.+..+.++...+.++++..+|.
T Consensus 32 ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS~ 78 (86)
T PF10785_consen 32 TAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRSS 78 (86)
T ss_pred HHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 3445556666665544 778888888888888888876553
No 321
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=29.38 E-value=1.6e+02 Score=24.22 Aligned_cols=23 Identities=22% Similarity=0.341 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHhhhhhhccccc
Q 013992 76 SMAVAGAIIGAAIGGWMNDRFGR 98 (432)
Q Consensus 76 s~~~~~~~i~~~~~g~l~dr~Gr 98 (432)
.-|.+++.+...+.|++.||.-+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Confidence 45677888888999999999875
No 322
>PRK11715 inner membrane protein; Provisional
Probab=28.63 E-value=5.2e+02 Score=24.80 Aligned_cols=22 Identities=32% Similarity=0.268 Sum_probs=10.3
Q ss_pred chHHHHHhhHHHHHHHHHHHhh
Q 013992 187 TWRWMLGVAGIPALLQFILMLL 208 (432)
Q Consensus 187 ~wr~~f~~~~~~~~~~~~~~~~ 208 (432)
+||....+.+.+..+..+++..
T Consensus 382 ~~k~g~~~~~~L~~LYg~Ly~l 403 (436)
T PRK11715 382 SWKRGLLFAAALAALYGVLYGL 403 (436)
T ss_pred cchHHHHHHHHHHHHHHHHHHH
Confidence 3555555544444444444333
No 323
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=28.62 E-value=1.6e+02 Score=18.76 Aligned_cols=46 Identities=11% Similarity=0.119 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHHHhhcCCC
Q 013992 166 LITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFILMLLLPES 212 (432)
Q Consensus 166 ~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~ 212 (432)
+.-+|.+++.+.+.......+ ++...++..+.+++...+...+|++
T Consensus 10 s~il~~vvgyI~ssL~~~~~n-~~~~~Ii~vi~~i~~~~~~~~i~~~ 55 (57)
T PF11151_consen 10 SFILGEVVGYIGSSLTGVTYN-FTTAAIIAVIFGIIVANIIAVIPKK 55 (57)
T ss_pred HHHHHHHHHHHHHHHhCCCCC-hHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 455677777777666655554 7777777777777776665555554
No 324
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=27.80 E-value=7e+02 Score=25.82 Aligned_cols=50 Identities=16% Similarity=0.204 Sum_probs=32.5
Q ss_pred hhhhhhcc----ccchHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHhhhhcccc
Q 013992 88 IGGWMNDR----FGRRTSILVADFLFFVGAVIMAAA-PNPGALITGRVFVGLGVG 137 (432)
Q Consensus 88 ~~g~l~dr----~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~r~l~G~~~~ 137 (432)
+.+.++|. -||.+-++++.+++.++++...+. +..+.+..+-++.+++.+
T Consensus 42 ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~ 96 (704)
T TIGR01666 42 IAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFI 96 (704)
T ss_pred HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 34556663 466677888888888888877765 455555555556655544
No 325
>PF01405 PsbT: Photosystem II reaction centre T protein; InterPro: IPR001743 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbT found in PSII, which is thought to be associated with the D1 (PsbA) - D2 (PsbD) heterodimer. PsbT may be involved in the formation and/or stabilisation of dimeric PSII complexes, because in the absence of this protein dimeric PSII complexes were found to be less abundant. Furthermore, although PsbT does not confer photo-protection, it is required for the efficient recovery of photo-damaged PSII [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3BZ1_T 1S5L_t 2AXT_t 3KZI_T 3PRQ_T 3BZ2_T 3PRR_T 4FBY_g 3A0H_t 3A0B_T ....
Probab=27.79 E-value=1.1e+02 Score=16.39 Aligned_cols=10 Identities=30% Similarity=0.783 Sum_probs=3.7
Q ss_pred HHhhcCCCHH
Q 013992 205 LMLLLPESPR 214 (432)
Q Consensus 205 ~~~~~~e~~~ 214 (432)
...+++|+||
T Consensus 19 fAI~FRePPr 28 (29)
T PF01405_consen 19 FAIFFREPPR 28 (29)
T ss_dssp HHHHSS----
T ss_pred hhhhccCCCC
Confidence 3556788775
No 326
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=27.73 E-value=1.4e+02 Score=21.87 Aligned_cols=47 Identities=15% Similarity=0.217 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHH
Q 013992 72 ESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAA 118 (432)
Q Consensus 72 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 118 (432)
|-..+.|.-.+.+.++++++..|+.-+.+-=.+|..++.++..+..+
T Consensus 57 GRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 57 GRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred hhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 66778888888999999999999988777767777777666655443
No 327
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=27.72 E-value=1.8e+02 Score=27.44 Aligned_cols=61 Identities=16% Similarity=0.093 Sum_probs=48.8
Q ss_pred HHHHhhhhccccchhhhHHHHHHhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 013992 126 ITGRVFVGLGVGMASMTSPLYISEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPG 186 (432)
Q Consensus 126 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~ 186 (432)
+....+.+...-..+...++..++..++.--|..|.+.+...++|.--...+..++.|...
T Consensus 373 i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~lt 433 (510)
T KOG3574|consen 373 ITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLT 433 (510)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCc
Confidence 3345666666666777788889999999999999999999999988777777777777665
No 328
>PRK10263 DNA translocase FtsK; Provisional
Probab=26.04 E-value=2.3e+02 Score=31.24 Aligned_cols=14 Identities=14% Similarity=0.361 Sum_probs=6.2
Q ss_pred HHHHHHHHHhhccC
Q 013992 170 GQFLSYLINLAFTR 183 (432)
Q Consensus 170 g~~i~~~i~~~l~~ 183 (432)
|+++|..+..++..
T Consensus 143 GGIIG~lLs~lL~~ 156 (1355)
T PRK10263 143 GGVIGSLLSTTLQP 156 (1355)
T ss_pred cchHHHHHHHHHHH
Confidence 44444444444433
No 329
>PRK02237 hypothetical protein; Provisional
Probab=25.66 E-value=2.4e+02 Score=20.84 Aligned_cols=48 Identities=13% Similarity=0.146 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHh
Q 013992 72 ESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAA 119 (432)
Q Consensus 72 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 119 (432)
|-+.+.|.-.+.+.++++++..|+.-+-+-=.+|..+..++..+..+.
T Consensus 59 GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 59 GRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 667788888889999999999999877776677777776666554443
No 330
>PF01988 VIT1: VIT family; InterPro: IPR008217 Proteins containing this entry have no known function and are predicted to be integral membrane proteins. They include the Ccc1 protein from Saccharomyces cerevisiae (Baker's yeast) (P47818 from SWISSPROT) that may have a role in regulating calcium levels [].
Probab=25.26 E-value=4.2e+02 Score=22.37 Aligned_cols=34 Identities=15% Similarity=0.217 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHHH
Q 013992 323 GLNAAGSIVSIYFIDRTGRKKLLVISLSGVILSL 356 (432)
Q Consensus 323 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 356 (432)
+..++.-.+.|++..|+..++...-+.-...++.
T Consensus 168 ~~~~~~L~~~G~~~a~~~~~~~~~~~l~~~~~G~ 201 (213)
T PF01988_consen 168 AVTILALFILGYFKARISGQSWWRSGLEMLLIGL 201 (213)
T ss_pred HHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHH
Confidence 3445556677777777776655444443333333
No 331
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=24.42 E-value=2.7e+02 Score=25.82 Aligned_cols=50 Identities=4% Similarity=0.143 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHHHHHhCC
Q 013992 72 ESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFFVGAVIMAAAPN 121 (432)
Q Consensus 72 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~ 121 (432)
.+......+|..++..+.+++.|++|....+.+..+.+.++.+......+
T Consensus 75 ~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~ 124 (372)
T PF00854_consen 75 NWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRK 124 (372)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCc
Confidence 45666667778888888899999999988888888888777766655543
No 332
>PRK04949 putative sulfate transport protein CysZ; Validated
Probab=24.31 E-value=4.8e+02 Score=22.78 Aligned_cols=22 Identities=5% Similarity=-0.005 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh
Q 013992 318 SLVTSGLNAAGSIVSIYFIDRT 339 (432)
Q Consensus 318 ~~~~~~~~~~~~~~~g~l~d~~ 339 (432)
.....+..+++.++.+.+++|.
T Consensus 88 ~lf~~v~~~IaaPF~~~lAE~V 109 (251)
T PRK04949 88 FFFSTLANFIAAPFNGLLAEKV 109 (251)
T ss_pred HHHHHHHHHHHHHHhHHHHHHH
Confidence 3344567788888888888886
No 333
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=23.91 E-value=5.8e+02 Score=23.56 Aligned_cols=121 Identities=11% Similarity=-0.019 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHH---HHHHHHHHhCChhHHHHHHhhhhccccchhhhHHHHHH
Q 013992 72 ESIVSMAVAGAIIGAAIGGWMNDRFGRRTSILVADFLFF---VGAVIMAAAPNPGALITGRVFVGLGVGMASMTSPLYIS 148 (432)
Q Consensus 72 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~ 148 (432)
|.+.....++..+ .++.+++.+.+|.-+.+..+.++.. --.+....++|......+-.+.|.-.|....-.....-
T Consensus 50 GI~~laP~la~~l-~~vi~Pl~~~~GaDPamfa~tiLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~TIvFtIPVaL 128 (354)
T PF04346_consen 50 GIMALAPVLAAFL-SPVIGPLFQAIGADPAMFAGTILANDMGGYQLAMELAQDPEAGIFSGLILGSMLGATIVFTIPVAL 128 (354)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHhCCCHHHHHHHHhhhcCcCHHHHHHHcCChhhHHHHHHHHHHhhcccEEeehhhhh
Confidence 5555555554444 5677888899999998888776652 33445567788888777777776655555443333333
Q ss_pred hcCCcccc-hhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHH
Q 013992 149 EASPAKIR-GALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGI 197 (432)
Q Consensus 149 ~~~~~~~R-~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~ 197 (432)
...++|+| -.+.|+.... +..-+|.++++.+... +|...+.-...
T Consensus 129 gii~k~D~~y~a~Gil~Gi--itIPiG~~vggl~~g~--~~~~il~Nl~P 174 (354)
T PF04346_consen 129 GIIEKEDHKYLAKGILAGI--ITIPIGCFVGGLIAGF--DIGMILINLIP 174 (354)
T ss_pred hhcChhhhHHHHHHHHHHH--hhhCHHHHHHHHHHhC--CHHHHHHHHHH
Confidence 44444444 3333332211 1122444445544432 36555544443
No 334
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=23.01 E-value=8.7e+02 Score=25.25 Aligned_cols=64 Identities=23% Similarity=0.196 Sum_probs=43.6
Q ss_pred HHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHHHHHHHHHHHhhhhhh
Q 013992 30 LRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMAVAGAIIGAAIGGWMN 93 (432)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~ 93 (432)
...+++++++.++-|+..+-+.+.-....+|.-.........+.+.++..+|=++|-++++.+.
T Consensus 234 ~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l 297 (735)
T KOG3626|consen 234 SYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCL 297 (735)
T ss_pred chhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 3455677788888999888777777777777755555555567777777766555555555443
No 335
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=22.91 E-value=6.3e+02 Score=23.91 Aligned_cols=56 Identities=20% Similarity=0.116 Sum_probs=38.1
Q ss_pred HHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCchhhHhHH
Q 013992 294 TVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRTGRKKLLVISL 349 (432)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~ 349 (432)
...+-...|+...++++-.......+.-+...++-..+.|...|+..|+|++....
T Consensus 45 ~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L 100 (503)
T KOG2601|consen 45 MWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWL 100 (503)
T ss_pred HHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHH
Confidence 34444556677777766666666666666667777777888889988877655433
No 336
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=22.64 E-value=88 Score=30.45 Aligned_cols=40 Identities=20% Similarity=0.051 Sum_probs=24.1
Q ss_pred HHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 013992 300 PTIVQLSGFASNRTALLLSLVTSGLNAAGSIVSIYFIDRT 339 (432)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 339 (432)
..++.-.+..++..-|.+.....+.-++..+++|+.+-|+
T Consensus 347 ti~fA~lGflSPs~RGsLmT~~~~l~v~~G~~agY~s~rl 386 (628)
T KOG1278|consen 347 TIFFACLGFLSPSSRGSLMTAMVLLFVFMGFVAGYVSARL 386 (628)
T ss_pred HHHHHHhccCCccccccHHHHHHHHHHHHHHhhhhhhhhh
Confidence 3444555666666555555555555666667777777664
No 337
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]
Probab=22.26 E-value=7.1e+02 Score=23.97 Aligned_cols=58 Identities=12% Similarity=0.015 Sum_probs=29.9
Q ss_pred HhcCCcccchhHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHhhHHHHHHHHHH
Q 013992 148 SEASPAKIRGALVSTNGFLITSGQFLSYLINLAFTRAPGTWRWMLGVAGIPALLQFIL 205 (432)
Q Consensus 148 ~~~~~~~~R~~~~~~~~~~~~~g~~i~~~i~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 205 (432)
.|..|+++|--...+.....+.-..++....|.+....-++++..+...+-.++..+.
T Consensus 11 ~~~vp~~~r~~~~~~~~vWfga~~~ias~~~G~ll~~~L~~~~si~aillG~llG~i~ 68 (442)
T COG1457 11 IEPVPEESRKGWLNLFLVWFGANFTIASMVTGGLLVPGLSFGQSLLAILLGNLLGGIF 68 (442)
T ss_pred CCCCChhhhhcchhHHHHHHHhHhHHHHHHHhccccccccHHHHHHHHHHHHHHHHHH
Confidence 4567778884443555555444444554444444333224777666555444443333
No 338
>COG2981 CysZ Uncharacterized protein involved in cysteine biosynthesis [Amino acid transport and metabolism]
Probab=21.98 E-value=5.2e+02 Score=22.28 Aligned_cols=20 Identities=5% Similarity=0.044 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHhhh
Q 013992 320 VTSGLNAAGSIVSIYFIDRT 339 (432)
Q Consensus 320 ~~~~~~~~~~~~~g~l~d~~ 339 (432)
...++++++.++.|.+++|.
T Consensus 88 fs~v~~~IAapFng~lAEkv 107 (250)
T COG2981 88 FSTVANLIAAPFNGLLAEKV 107 (250)
T ss_pred HHHHHHHHHhhhhhHHHHHH
Confidence 34456677777778888875
No 339
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=21.89 E-value=2.6e+02 Score=21.78 Aligned_cols=24 Identities=17% Similarity=0.202 Sum_probs=18.3
Q ss_pred HHHhcCCcccchhHHHHHHHHHHH
Q 013992 146 YISEASPAKIRGALVSTNGFLITS 169 (432)
Q Consensus 146 ~i~~~~~~~~R~~~~~~~~~~~~~ 169 (432)
-+.|++|++.|....+.++.....
T Consensus 59 aLkdi~P~~~R~~i~~~~~~~~~~ 82 (137)
T PF04281_consen 59 ALKDIFPPSVRNWISSTVSTTSSA 82 (137)
T ss_pred HHhccCCHHHHHHHHHHHHHHHHH
Confidence 468999999999887776655443
No 340
>PRK11875 psbT photosystem II reaction center protein T; Reviewed
Probab=21.81 E-value=1.4e+02 Score=16.18 Aligned_cols=9 Identities=11% Similarity=0.571 Sum_probs=6.0
Q ss_pred HhhcCCCHH
Q 013992 206 MLLLPESPR 214 (432)
Q Consensus 206 ~~~~~e~~~ 214 (432)
..+++|+||
T Consensus 20 AIfFRepPr 28 (31)
T PRK11875 20 AIAFRDPPK 28 (31)
T ss_pred hhhccCCCC
Confidence 556678775
No 341
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=21.54 E-value=1.7e+02 Score=20.01 Aligned_cols=15 Identities=27% Similarity=0.461 Sum_probs=7.2
Q ss_pred HHHHHHhhhhhhccc
Q 013992 82 AIIGAAIGGWMNDRF 96 (432)
Q Consensus 82 ~~i~~~~~g~l~dr~ 96 (432)
.++.+.+.|+..+.+
T Consensus 20 ~~iisfi~Gy~~q~~ 34 (76)
T PF06645_consen 20 SAIISFIVGYITQSF 34 (76)
T ss_pred HHHHHHHHHHHHHHH
Confidence 334444555555543
No 342
>COG2119 Predicted membrane protein [Function unknown]
Probab=21.18 E-value=4.8e+02 Score=21.54 Aligned_cols=37 Identities=5% Similarity=-0.070 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHHhhhCCchhhHhHHHHHHHHHH
Q 013992 321 TSGLNAAGSIVSIYFIDRTGRKKLLVISLSGVILSLG 357 (432)
Q Consensus 321 ~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 357 (432)
..++.+++.+.+.++++|+..|+...++.+++.+..+
T Consensus 143 ~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fal 179 (190)
T COG2119 143 MILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFAL 179 (190)
T ss_pred HHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHH
Confidence 4566788888999999999999888877666655443
No 343
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.96 E-value=1.6e+02 Score=27.93 Aligned_cols=114 Identities=22% Similarity=0.204 Sum_probs=0.0
Q ss_pred cCCCcccccchheeeccCCC-------ChhHHHHHHHHHHhhcccceeccccchhhhhhhhccccchhhhHHHHHHHHHH
Q 013992 6 HGGGTTDASAFRECFSLSWK-------NPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKSVDRKTLLQESIVSMA 78 (432)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~s~~ 78 (432)
+.|++-|+-+.+...+..|+ ++-....++..+++.-.+.+... ...++-.+..++ .... |-+.+..
T Consensus 260 ~dee~~d~~d~d~~~E~GWK~vHgDVFR~p~~~~Lfsa~lGsG~Qlf~l~-~~ii~~Alvg~f---y~~r---Gal~saa 332 (593)
T KOG1277|consen 260 KDEEALDDMDRDDQEEYGWKQVHGDVFRFPSHPLLFSAVLGSGAQLFTLV-LIIIMLALVGVF---YTER---GALLSAA 332 (593)
T ss_pred cchhhhccccccccccccceeeecccccCCCccHHHHHHhccccchHHHH-HHHHHHHHHhhh---hccc---hHHHHHH
Q ss_pred HHHHHHHHHhhhhhhccc-----cchHH--HHHHHHHHHHHHHHHHHhCChhHHH
Q 013992 79 VAGAIIGAAIGGWMNDRF-----GRRTS--ILVADFLFFVGAVIMAAAPNPGALI 126 (432)
Q Consensus 79 ~~~~~i~~~~~g~l~dr~-----Grr~~--l~~~~~~~~~~~~~~~~~~~~~~~~ 126 (432)
.+.+++.+++.|+.+..+ |||++ ++++..+...-.+..++--|.....
T Consensus 333 I~vYAlTs~i~GY~~gs~Y~r~gG~~Wik~m~lta~Lfp~~~~~t~~~~N~vai~ 387 (593)
T KOG1277|consen 333 IVVYALTSPINGYVSGSFYARLGGRRWIKNMLLTASLFPVPVFGTAFLLNTVAIA 387 (593)
T ss_pred HHHHHhcccccccccceeeehhccHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH
No 344
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=20.82 E-value=1.7e+02 Score=25.76 Aligned_cols=52 Identities=19% Similarity=0.233 Sum_probs=0.0
Q ss_pred HHHHHhHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHH---------HHHHhhhCCchhh
Q 013992 293 NTVMYYSPTIVQLSGFASNRTALLLSLVTSGLNAAGSIVS---------IYFIDRTGRKKLL 345 (432)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------g~l~d~~~~~~~~ 345 (432)
....+|+-.|+.+.+.+ +.....+++...+...+..++. .+-.||+|||+.+
T Consensus 34 ScWFTYlllfltqigls-p~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~w 94 (412)
T KOG4830|consen 34 SCWFTYLLLFLTQIGLS-PSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSW 94 (412)
T ss_pred HHHHHHHHHHHHHhcCC-cchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeee
No 345
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=20.23 E-value=4e+02 Score=22.16 Aligned_cols=13 Identities=31% Similarity=0.391 Sum_probs=7.6
Q ss_pred hhhhhhccccchH
Q 013992 88 IGGWMNDRFGRRT 100 (432)
Q Consensus 88 ~~g~l~dr~Grr~ 100 (432)
..+...+||||+-
T Consensus 154 ~i~~~leryg~~l 166 (191)
T PF03596_consen 154 IIAEFLERYGRWL 166 (191)
T ss_pred HHHHHHHHhcccH
Confidence 3445566777663
Done!