Query 013993
Match_columns 432
No_of_seqs 348 out of 2009
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 03:33:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013993.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013993hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qdm_A Prophytepsin; aspartic 100.0 2.1E-75 7.1E-80 598.6 26.9 395 31-432 1-396 (478)
2 3psg_A Pepsinogen; hydrolase(a 100.0 2.3E-58 7.8E-63 459.1 26.9 315 30-357 1-328 (370)
3 2x0b_A Renin; hydrolase-hormon 100.0 1.5E-57 5.3E-62 454.3 27.1 310 28-344 6-328 (383)
4 1b5f_A Protein (cardosin A); h 100.0 1.2E-52 4.1E-57 393.5 25.0 238 76-317 2-239 (239)
5 4aa9_A Chymosin; hydrolase, as 100.0 5.9E-52 2E-56 405.6 24.1 271 78-357 2-282 (320)
6 3cms_A Chymosin B; hydrolase, 100.0 1.5E-51 5.2E-56 403.1 26.4 273 76-357 3-285 (323)
7 1tzs_A Cathepsin E; hydrolase, 100.0 1.7E-51 5.8E-56 407.3 26.4 266 76-343 12-286 (351)
8 3k1w_A Renin; protease, altern 100.0 3E-51 1E-55 404.0 26.5 280 75-357 6-298 (341)
9 1dpj_A Proteinase A; proteinas 100.0 3.8E-51 1.3E-55 401.4 26.0 265 77-344 3-278 (329)
10 3qvc_A Histo-aspartic protease 100.0 2E-51 6.9E-56 417.4 24.0 272 75-357 125-410 (451)
11 1htr_B Gastricsin; aspartyl pr 100.0 5.8E-51 2E-55 400.1 23.3 273 78-357 4-286 (329)
12 1miq_A Plasmepsin; aspartic pr 100.0 7.1E-51 2.4E-55 405.8 23.7 258 75-343 50-321 (375)
13 1am5_A Pepsin, acid proteinase 100.0 7.5E-51 2.6E-55 398.4 23.1 271 78-357 3-282 (324)
14 2bju_A Plasmepsin II; aspartic 100.0 3.9E-50 1.3E-54 407.5 23.9 259 76-343 127-397 (453)
15 1mpp_A Pepsin; hydrolase(acid 100.0 2.9E-49 9.9E-54 392.9 24.5 264 76-343 7-305 (361)
16 1yg9_A Aspartic protease BLA G 100.0 3.4E-49 1.2E-53 387.5 24.1 270 76-357 6-291 (330)
17 2apr_A Rhizopuspepsin; hydrola 100.0 1.5E-47 5.2E-52 375.1 27.8 254 83-343 11-276 (325)
18 3c9x_A Trichoderma reesei aspa 100.0 2.9E-47 9.9E-52 373.7 25.7 252 83-343 11-278 (329)
19 1oew_A Endothiapepsin; hydrola 100.0 3.7E-47 1.3E-51 372.9 25.3 250 84-343 12-277 (329)
20 3fv3_A SAPP1P-secreted asparti 100.0 9E-47 3.1E-51 371.8 27.5 255 77-344 3-284 (339)
21 1j71_A Candidapepsin, aspartic 100.0 1.8E-46 6E-51 368.9 25.8 254 77-343 3-277 (334)
22 2qzx_A Candidapepsin-5; aspart 100.0 2.6E-46 8.8E-51 369.0 26.7 255 76-343 2-279 (342)
23 3pvk_A Candidapepsin-2; hydrol 100.0 2.5E-46 8.6E-51 369.0 25.9 255 77-343 3-279 (342)
24 1izd_A Aspartic proteinase; su 100.0 4.2E-45 1.4E-49 357.4 24.4 250 79-343 9-273 (323)
25 1ibq_A Aspergillopepsin; aspar 100.0 5.2E-45 1.8E-49 357.1 24.4 247 85-343 12-273 (325)
26 3lpj_A Beta-secretase 1; alzhe 100.0 2E-45 6.9E-50 375.9 19.7 242 79-326 66-333 (455)
27 1bxo_A Protein (penicillopepsi 100.0 4.2E-45 1.4E-49 357.4 20.5 245 85-343 13-272 (323)
28 1wkr_A Polyporopepsin; hydrola 100.0 6.6E-44 2.2E-48 351.5 25.5 245 77-343 3-272 (340)
29 3vf3_A Beta-secretase 1; struc 100.0 6.4E-44 2.2E-48 359.4 20.4 240 81-326 22-287 (402)
30 2ewy_A Beta-secretase 2; BACE2 100.0 2E-43 6.9E-48 353.5 22.8 232 80-317 6-249 (383)
31 2qp8_A Beta-secretase 1; BACE1 100.0 1.5E-42 5.1E-47 348.6 22.0 231 79-316 13-259 (395)
32 3aup_A SBG7S, BG, basic 7S glo 100.0 9.8E-41 3.3E-45 336.1 20.6 255 77-343 10-335 (403)
33 3vla_A EDGP; extracellular, in 100.0 1.1E-39 3.9E-44 328.5 17.0 230 77-316 9-293 (413)
34 1t6e_X Xylanase inhibitor; two 100.0 1E-36 3.4E-41 304.6 14.3 221 78-316 4-257 (381)
35 1lya_B Cathepsin D; lysosomal 100.0 3.3E-29 1.1E-33 234.6 17.0 175 168-343 1-185 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 1.2E-25 4.2E-30 179.3 10.8 93 77-169 3-96 (97)
37 3rfi_A Asp; PSI, saposin, hydr 99.9 3.6E-24 1.2E-28 173.8 -0.8 107 315-423 2-108 (108)
38 1l9l_A Granulysin; saposin fol 99.0 4.3E-11 1.5E-15 89.4 -1.2 43 386-429 2-44 (74)
39 1of9_A Pore-forming peptide am 98.8 8.2E-10 2.8E-14 83.5 1.5 44 385-429 2-45 (77)
40 2qyp_A Proactivator polypeptid 98.8 1.9E-09 6.4E-14 84.4 2.2 47 384-430 4-50 (91)
41 1nkl_A NK-lysin; saposin fold, 98.8 1.7E-09 5.8E-14 82.0 1.7 43 386-429 2-44 (78)
42 3bqp_A Proactivator polypeptid 98.8 1.8E-09 6.3E-14 82.2 1.7 44 385-428 2-45 (80)
43 4ddj_A Saposin-A, protein A; s 98.7 6.6E-09 2.2E-13 79.8 3.6 41 385-425 3-43 (83)
44 2gtg_A Proactivator polypeptid 98.7 2.3E-09 7.9E-14 82.3 0.4 45 383-427 2-46 (83)
45 1n69_A Saposin B; lipid bindin 98.6 9.2E-09 3.2E-13 78.5 1.4 43 385-427 3-46 (81)
46 2js9_A Saposin-like protein fa 98.5 5.1E-09 1.7E-13 82.6 -1.3 41 383-425 19-59 (99)
47 2qyp_A Proactivator polypeptid 97.1 4.8E-05 1.6E-09 59.0 -1.0 41 319-359 45-85 (91)
48 2js9_A Saposin-like protein fa 96.8 8.8E-05 3E-09 58.3 -1.9 37 320-356 63-99 (99)
49 3bqp_A Proactivator polypeptid 96.8 0.00011 3.9E-09 55.2 -1.5 38 319-356 42-79 (80)
50 1nkl_A NK-lysin; saposin fold, 96.7 0.00013 4.4E-09 54.8 -1.4 38 319-356 40-77 (78)
51 1of9_A Pore-forming peptide am 96.6 7.4E-05 2.5E-09 56.0 -3.6 38 318-355 40-77 (77)
52 3s64_A AC-SLP-1, saposin-like 96.6 0.0003 1E-08 53.3 -0.3 38 385-424 10-47 (87)
53 2gtg_A Proactivator polypeptid 96.4 0.00012 4.3E-09 55.5 -3.4 39 319-357 44-82 (83)
54 1n69_A Saposin B; lipid bindin 96.2 0.00019 6.4E-09 54.3 -3.5 37 319-356 44-80 (81)
55 1l9l_A Granulysin; saposin fol 96.1 0.00025 8.7E-09 52.5 -3.1 36 318-353 38-74 (74)
56 4ddj_A Saposin-A, protein A; s 96.0 0.00023 8E-09 54.0 -3.7 37 320-356 45-82 (83)
57 2i1a_A DNA damage-inducible pr 94.3 0.068 2.3E-06 44.8 5.9 91 85-200 23-115 (148)
58 3s8i_A Protein DDI1 homolog 1; 91.3 0.31 1.1E-05 40.8 5.7 90 87-200 23-114 (148)
59 3s64_A AC-SLP-1, saposin-like 90.3 0.017 5.7E-07 43.7 -2.7 36 320-355 52-87 (87)
60 2hs1_A HIV-1 protease; ultra-h 79.1 2.6 8.7E-05 32.6 4.6 29 90-120 10-38 (99)
61 1fmb_A EIAV protease; hydrolas 78.5 2.2 7.4E-05 33.3 4.1 27 89-117 9-35 (104)
62 3vcm_P Prorenin; aspartic prot 77.6 1.2 4.1E-05 28.6 2.0 23 29-51 7-29 (43)
63 3liy_A Protease; hydrolase, hy 73.9 3.5 0.00012 32.5 4.1 32 90-121 12-46 (116)
64 3ec0_A Protease; HIV-2, inhibi 73.2 4.3 0.00015 31.2 4.5 29 90-120 10-38 (99)
65 3s8i_A Protein DDI1 homolog 1; 69.3 3.6 0.00012 34.2 3.5 29 275-310 29-57 (148)
66 2i1a_A DNA damage-inducible pr 69.2 4.3 0.00015 33.4 4.1 29 275-310 31-59 (148)
67 1htr_P Progastricsin (Pro segm 66.8 2.4 8.3E-05 26.7 1.6 22 30-51 2-23 (43)
68 1tzs_P Activation peptide from 66.3 2.6 8.9E-05 25.1 1.6 22 29-50 2-23 (35)
69 2hah_A Protease, retropepsin; 65.0 6.2 0.00021 31.3 3.9 27 89-118 15-41 (116)
70 2w50_A ArMet-like protein 1; M 57.7 12 0.0004 28.8 4.1 36 387-422 5-43 (102)
71 3sqf_A Protease; folded monome 57.4 11 0.00036 29.8 4.0 29 90-120 11-39 (114)
72 3slz_A GAG-Pro-POL polyprotein 54.6 14 0.00047 30.0 4.3 30 88-119 22-51 (132)
73 3ka2_A [L-Ala51;Gly51']HIV-1 p 45.1 19 0.00064 31.5 4.0 28 89-118 9-36 (203)
74 2rsp_A RSV protease; hydrolase 41.5 26 0.00089 28.0 4.0 24 95-120 27-50 (124)
75 3a4c_A DNA replication factor 38.4 22 0.00074 27.5 2.9 33 392-424 37-69 (106)
76 1bxo_A Protein (penicillopepsi 36.7 32 0.0011 32.0 4.6 43 254-306 3-45 (323)
77 1izd_A Aspartic proteinase; su 36.5 36 0.0012 31.7 4.8 43 255-307 4-46 (323)
78 1ibq_A Aspergillopepsin; aspar 35.2 34 0.0012 31.9 4.5 43 255-307 3-45 (325)
79 1b5f_A Protein (cardosin A); h 35.2 35 0.0012 30.2 4.4 39 78-118 181-227 (239)
80 3f0i_A Arsenate reductase; str 34.6 47 0.0016 26.1 4.5 35 384-418 10-53 (119)
81 2hl7_A Cytochrome C-type bioge 29.2 70 0.0024 23.6 4.3 33 385-417 39-71 (84)
82 1fmb_A EIAV protease; hydrolas 28.5 38 0.0013 26.1 2.9 35 268-309 6-40 (104)
83 3s63_A Na-SLP-1, saposin-like 27.7 69 0.0024 24.3 4.0 38 387-424 6-44 (117)
84 2kw0_A CCMH protein; oxidoredu 27.2 93 0.0032 23.2 4.7 33 385-417 36-68 (90)
85 3rdw_A Putative arsenate reduc 26.7 50 0.0017 26.0 3.4 35 384-418 11-54 (121)
86 1oew_A Endothiapepsin; hydrola 26.4 68 0.0023 29.8 4.9 43 255-305 3-46 (329)
87 3fz4_A Putative arsenate reduc 26.1 55 0.0019 25.7 3.6 35 384-418 9-52 (120)
88 2hs1_A HIV-1 protease; ultra-h 26.0 44 0.0015 25.5 2.8 30 268-304 6-35 (99)
89 1mpp_A Pepsin; hydrolase(acid 26.0 53 0.0018 31.0 4.1 44 254-305 4-49 (361)
90 3c9x_A Trichoderma reesei aspa 25.5 72 0.0025 29.6 4.9 45 255-307 3-48 (329)
91 3gkx_A Putative ARSC family re 25.3 62 0.0021 25.4 3.7 35 384-418 10-53 (120)
92 3aup_A SBG7S, BG, basic 7S glo 24.9 56 0.0019 31.4 4.1 42 77-118 218-276 (403)
93 2hah_A Protease, retropepsin; 24.9 41 0.0014 26.5 2.5 31 266-304 10-40 (116)
94 3ec0_A Protease; HIV-2, inhibi 24.6 47 0.0016 25.4 2.7 30 267-303 5-34 (99)
95 1lya_B Cathepsin D; lysosomal 23.3 68 0.0023 28.2 4.0 40 78-119 92-138 (241)
96 1rw1_A Conserved hypothetical 23.2 95 0.0033 23.8 4.5 33 385-417 7-48 (114)
97 3ka2_A [L-Ala51;Gly51']HIV-1 p 22.1 79 0.0027 27.5 4.0 29 89-119 113-141 (203)
98 1s3c_A Arsenate reductase; ARS 21.7 79 0.0027 25.6 3.8 35 384-418 8-51 (141)
99 2apr_A Rhizopuspepsin; hydrola 21.7 86 0.0029 29.0 4.6 42 256-305 5-46 (325)
100 1qdm_A Prophytepsin; aspartic 21.6 77 0.0026 31.4 4.4 39 78-118 224-270 (478)
101 1yg9_A Aspartic protease BLA G 21.4 47 0.0016 31.0 2.7 40 78-119 186-231 (330)
102 1htr_B Gastricsin; aspartyl pr 21.4 85 0.0029 29.1 4.5 41 78-120 182-230 (329)
103 3cms_A Chymosin B; hydrolase, 20.5 41 0.0014 31.2 2.0 42 256-305 2-45 (323)
104 3qvc_A Histo-aspartic protease 20.4 86 0.003 30.8 4.4 41 78-120 307-350 (451)
No 1
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=2.1e-75 Score=598.57 Aligned_cols=395 Identities=69% Similarity=1.209 Sum_probs=324.0
Q ss_pred EEEeeeeccchhhhhcccCcccchhhhccccccccccCCCCC-CCCCceeeecccCCceEEEEEEecCCCcEEEEEeecC
Q 013993 31 VRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLG-DSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTG 109 (432)
Q Consensus 31 ~~vpl~k~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTG 109 (432)
+||||+|+++.++.+.+.+..+..... ..+++. ... .++...+||.|+.+.+|+++|+||||||+|.|+||||
T Consensus 1 ~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTG 74 (478)
T 1qdm_A 1 VRIALKKRPIDRNSRVATGLSGGEEQP---LLSGAN---PLRSEEEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTG 74 (478)
T ss_dssp CEEEEEECCCCHHHHHHHHTC----------------------CCSSCSGGGCCGGGCCEEEEEEETTTTEEEEEEEETT
T ss_pred CeeeeeeccchHHHHHhcchhhhhHHH---HHhhcc---cccCcCCCceEEeEeccCCEEEEEEEECCCCeEEEEEEcCC
Confidence 489999999999988776644222110 111110 011 1245679999999999999999999999999999999
Q ss_pred CCceeeeCCCCCCCcccccCCcccCCCCCCceeCCceEEEEeccCeEEEEEEEEEEEEceeEeeceeEEEEeeecccccc
Q 013993 110 SSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFL 189 (432)
Q Consensus 110 Ss~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~gs~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~ 189 (432)
|+++||++..|..+..|..|+.|+|++|+||+..++.|.+.|++|+++|.+++|+|++|+..+++|.||++....+..|.
T Consensus 75 Ss~lWV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~f~ 154 (478)
T 1qdm_A 75 SSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFL 154 (478)
T ss_dssp CCCCEEEBTTCCSCGGGGGSCCBCGGGCTTCBCCCCEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCBSHHH
T ss_pred CcceEEecCCCCCCccccCCCCCCcccCCCeeeCCcEEEEEcCCCCeEEEEEEEEEEECCeEECCEEEEEEEecCCcccc
Confidence 99999999999645689999999999999999999999999999999999999999999999999999999987665566
Q ss_pred cccccceecccccccccCCCCchhhhhhhcCCCCCCeEEEEeccCCCCCCCcEEEECccCCCCCccceEEEecCCCCcce
Q 013993 190 AAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQ 269 (432)
Q Consensus 190 ~~~~~GilGLg~~~~s~~~~~p~~~~l~~qg~i~~~~fs~~l~~~~~~~~~G~l~fGg~D~s~~~g~l~~~pv~~~~~w~ 269 (432)
...++||||||++.++.....|++++|++||+|++++||+||++..+...+|+|+|||+|+++|.|+++|+|+.+.+||+
T Consensus 155 ~~~~dGIlGLg~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~~~w~ 234 (478)
T 1qdm_A 155 VAKFDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYWQ 234 (478)
T ss_dssp HCSSSEEEECSCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEETTEE
T ss_pred cccccceecccccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCCCeEE
Confidence 77889999999999888778899999999999999999999998643345899999999999999999999999899999
Q ss_pred EEeceEEECCeeeeecCCCceEEEcCCCcCcccCHHHHHHHHHHhCCcceeeeccccccccccceehhhhhhccCccccc
Q 013993 270 FEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGKTILEMLIAETQPQKIC 349 (432)
Q Consensus 270 v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~~~~~i~~~i~a~g~~~~~C~~~v~~yg~~ii~~~~~~~~p~~ic 349 (432)
|.|++|.|+++.+.++..++.+|+||||+++++|.+++++|+++|++.+.+..+|+.++.+||+.+++++++++.|+.+|
T Consensus 235 v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC 314 (478)
T 1qdm_A 235 FDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKIC 314 (478)
T ss_dssp EEECCEEETTEECSTTTTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHH
T ss_pred EEEeEEEECCEEEeecCCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhh
Confidence 99999999998877677789999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCccceecccccccccCCCCCCCCCCCCccchhhHHHHHHHHHHhhhcccHHHHHHHHHhhcccCCCCCCCC
Q 013993 350 SQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGES 429 (432)
Q Consensus 350 ~~~glC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~v~~~~~~l~~n~t~~~i~~~l~~~C~~lp~~~~~~ 429 (432)
.++|+|..++.+.....+++++++++.+++ ....+..|.+|||+|.|+|++|++|+|+++|+++|+++|..+|.+.++.
T Consensus 315 ~~iglC~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~ 393 (478)
T 1qdm_A 315 SQVGLCTFDGTRGVSAGIRSVVDDEPVKSN-GLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGES 393 (478)
T ss_dssp HHTTCC----------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCC
T ss_pred ccccccccCccccccccccccccccccccc-cccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeE
Confidence 999999998776666677777776542222 1246789999999999999999999999999999999999999887765
Q ss_pred CCC
Q 013993 430 AVD 432 (432)
Q Consensus 430 ~v~ 432 (432)
.||
T Consensus 394 ~v~ 396 (478)
T 1qdm_A 394 AVD 396 (478)
T ss_dssp EEC
T ss_pred Eee
Confidence 543
No 2
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=2.3e-58 Score=459.11 Aligned_cols=315 Identities=39% Similarity=0.677 Sum_probs=270.2
Q ss_pred eEEEeeeeccchhhhhcccCcccchhhhccccccccccCCCC-CCC--CCceeeecccCCceEEEEEEecCCCcEEEEEe
Q 013993 30 LVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSL-GDS--DTDIVALNNFMDAQYFGEVSIGTPSQTFTVIF 106 (432)
Q Consensus 30 ~~~vpl~k~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~--~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~ 106 (432)
++||||+|.++.|+.+.+++..++ +|+. +++++..++ .++ ....+||.|+.|.+|+++|+||||||+|.|+|
T Consensus 1 ~~~ipl~~~~s~r~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~ 75 (370)
T 3psg_A 1 LVKVPLVRKKSLRQNLIKDGKLKD---FLKT--HKHNPASKYFPEAAALIGDEPLENYLDTEYFGTIGIGTPAQDFTVIF 75 (370)
T ss_dssp CEEEEEEECCCHHHHHHHTTCHHH---HHHH--CCCCGGGGTCTTSCCSSCCCTTGGGTTCCEEEEEEETTTTEEEEEEE
T ss_pred CEEEEeEEcCcHHHHHHhcCcHHH---HHhh--hhcchhhhhccccccccceecceeccCCEEEEEEEEcCCCCEEEEEE
Confidence 479999999999999988887544 2221 112211111 111 34668999999999999999999999999999
Q ss_pred ecCCCceeeeCCCCCCCcccccCCcccCCCCCCceeCCceEEEEeccCeEEEEEEEEEEEEceeEeeceeEEEEeeeccc
Q 013993 107 DTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEASI 186 (432)
Q Consensus 107 DTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~gs~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~ 186 (432)
||||+++||++..|. +..|..|+.|++++|+||+..++.|.+.|++|+++|.+++|+|++|+..+++|.||++....+.
T Consensus 76 DTGSs~lWV~s~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~ 154 (370)
T 3psg_A 76 DTGSSNLWVPSVYCS-SLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGS 154 (370)
T ss_dssp ETTCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCG
T ss_pred eCCCCccEEECCCCC-CcccCCCCCCCCccCcCcEECCcEEEEEeCCceEEEEEEEEEEeeCCcccCCeEEEEEEeeccc
Confidence 999999999999996 5689999999999999999999999999999999999999999999999999999999988766
Q ss_pred ccccccccceecccccccccCCCCchhhhhhhcCCCCCCeEEEEeccCCCCCCCcEEEECccCCCCCccceEEEecCCCC
Q 013993 187 TFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKG 266 (432)
Q Consensus 187 ~~~~~~~~GilGLg~~~~s~~~~~p~~~~l~~qg~i~~~~fs~~l~~~~~~~~~G~l~fGg~D~s~~~g~l~~~pv~~~~ 266 (432)
.|....++||||||++.++....+|++++|++||+|++++||+||++.. ..+|+|+|||+|+++|+|+++|+|+.+.+
T Consensus 155 ~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~--~~~G~l~fGg~D~~~y~g~l~~~pv~~~~ 232 (370)
T 3psg_A 155 FLYYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSND--DSGSVVLLGGIDSSYYTGSLNWVPVSVEG 232 (370)
T ss_dssp GGGGCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-------CEEEEETCCCGGGBSSCCEEEECSEET
T ss_pred ccccCCccceeccCCccccccCCCCHHHHHHHCCCCCCCEEEEEEccCC--CCCeEEEEEeeChHhcCCcceeecccccc
Confidence 6777889999999999998888899999999999999999999999862 34899999999999999999999999999
Q ss_pred cceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHHHHHHHHHHhCCc----ceeeecccc------ccccccceeh
Q 013993 267 YWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGAS----GVISQECKT------LVDQYGKTIL 336 (432)
Q Consensus 267 ~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~~~~~i~~~i~a~----g~~~~~C~~------~v~~yg~~ii 336 (432)
||+|.|++|.|+++.+. +..++.||+||||+++++|.+++++|++++++. |.|..+|.. +.+.||+..+
T Consensus 233 ~w~v~l~~i~v~g~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~~g~~~v~C~~~~~lP~i~f~~~g~~~ 311 (370)
T 3psg_A 233 YWQITLDSITMDGETIA-CSGGCQAIVDTGTSLLTGPTSAIANIQSDIGASENSDGEMVISCSSIDSLPDIVFTIDGVQY 311 (370)
T ss_dssp TEEEEECEEESSSSEEE-CTTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEECTTCCEECCGGGGGGCCCEEEEETTEEE
T ss_pred eeEEEEeEEEECCEEEe-cCCCceEEEcCCCCcEECCHHHHHHHHHHhCCcccCCCcEEEECCCcccCCcEEEEECCEEE
Confidence 99999999999998775 567899999999999999999999999999985 778999985 5678899888
Q ss_pred hhhhhccCccccccccccccc
Q 013993 337 EMLIAETQPQKICSQMGLCTF 357 (432)
Q Consensus 337 ~~~~~~~~p~~ic~~~glC~~ 357 (432)
.++.+++.-+ ..+.|..
T Consensus 312 ~l~~~~yi~~----~~~~C~~ 328 (370)
T 3psg_A 312 PLSPSAYILQ----DDDSCTS 328 (370)
T ss_dssp EECHHHHEEE----CSSCEEE
T ss_pred EECHHHhccc----CCCEEEE
Confidence 8877665322 3456864
No 3
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=1.5e-57 Score=454.30 Aligned_cols=310 Identities=39% Similarity=0.686 Sum_probs=241.6
Q ss_pred CceEEEeeeeccchhhhhcccCc-ccchhhhccccccccccCCCCCCCCCceeeecccCCceEEEEEEecCCCcEEEEEe
Q 013993 28 DGLVRIGLRKKKLDQINRLVGQT-VSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIF 106 (432)
Q Consensus 28 ~~~~~vpl~k~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~ 106 (432)
++++||||+|+++.|+.+.+.+. ..+ +++++...++... ..+....+||.|+.|.+|+++|+||||||+|.|+|
T Consensus 6 ~~~~~i~l~k~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~l~n~~~~~Y~~~I~IGTP~Q~f~vi~ 80 (383)
T 2x0b_A 6 TTFKRIFLKRMPSIRESLKERGVDMAR---LGPEWSQPMKRLT--LGNTTSSVILTNYMDTQYYGEIGIGTPPQTFKVVF 80 (383)
T ss_dssp --------------------------------------------------CEEEEEEETTTEEEEEEEETTTTEEEEEEE
T ss_pred CcEEEEEEEECCcHHHHHHHhCchHHH---HHHhhcccccccc--ccCCcceEeeeecCCCEEEEEEEECCCCcEEEEEE
Confidence 35899999999998888877664 222 1211100001000 00124569999999999999999999999999999
Q ss_pred ecCCCceeeeCCCCCC-CcccccCCcccCCCCCCceeCCceEEEEeccCeEEEEEEEEEEEEceeEeeceeEEEEeeecc
Q 013993 107 DTGSSNLWVPSAKCYF-SVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFFSQDNVKVGDLVVKNQDFIEATKEAS 185 (432)
Q Consensus 107 DTGSs~~WV~~~~C~~-~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~gs~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~ 185 (432)
||||+++||++..|.. ..+|..|+.||+++|+||+..++.|.+.|++|+++|.+++|+|++|+..++ |.||++....+
T Consensus 81 DTGSs~lWV~s~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~g 159 (383)
T 2x0b_A 81 DTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITVT-QMFGEVTEMPA 159 (383)
T ss_dssp ETTCCCEEEEBTTSCTTSHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEEEEEEEEEEEETTEEEE-EEEEEEEECCH
T ss_pred eCCCCCeEEeccCCCCCcccccCCCCCCCCCCCcEEECCcEEEEEcCCccEEEEEEeeEEEEcCceEE-EEEEEEEecCC
Confidence 9999999999999962 358999999999999999999999999999999999999999999999999 99999998876
Q ss_pred cccccccccceecccccccccCCCCchhhhhhhcCCCCCCeEEEEeccCCCCC--CCcEEEECccCCCCCccceEEEecC
Q 013993 186 ITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGE--EGGEIVFGGVDPDHYKGEHTYVPVT 263 (432)
Q Consensus 186 ~~~~~~~~~GilGLg~~~~s~~~~~p~~~~l~~qg~i~~~~fs~~l~~~~~~~--~~G~l~fGg~D~s~~~g~l~~~pv~ 263 (432)
..|....++||||||++.++.....|++++|++||+|++++||+||++..... .+|+|+|||+|+++|+|+++|+|+.
T Consensus 160 ~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~ 239 (383)
T 2x0b_A 160 LPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI 239 (383)
T ss_dssp HHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBS
T ss_pred cccccCCCceEeccCCCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcC
Confidence 66667789999999999998888899999999999999999999999864321 3899999999999999999999999
Q ss_pred CCCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHHHHHHHHHHhCCc---ceeeecccc------ccccccce
Q 013993 264 KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGAS---GVISQECKT------LVDQYGKT 334 (432)
Q Consensus 264 ~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~~~~~i~~~i~a~---g~~~~~C~~------~v~~yg~~ 334 (432)
+.+||+|.|++|.|+++.+. +..++.||+||||+++++|.+++++|++++++. |.|.++|.. +.+.|++.
T Consensus 240 ~~~~w~v~l~~i~v~~~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~g~~~v~C~~~~~~P~i~f~~~g~ 318 (383)
T 2x0b_A 240 KTGVWQIQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKLMEALGAKKRLFDYVVKCNEGPTLPDISFHLGGK 318 (383)
T ss_dssp STTSCEEEECEEEESSCCCB-STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEECSSCEEEEGGGTTTCCCEEEEETTE
T ss_pred CCceEEEEEeEEEeCCceEE-cCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcccCCcEEEeccccccCceEEEEECCE
Confidence 99999999999999998753 667899999999999999999999999999974 678899984 56688888
Q ss_pred ehhhhhhccC
Q 013993 335 ILEMLIAETQ 344 (432)
Q Consensus 335 ii~~~~~~~~ 344 (432)
.+.+..+++.
T Consensus 319 ~~~l~~~~yi 328 (383)
T 2x0b_A 319 EYTLTSADYV 328 (383)
T ss_dssp EEEECHHHHB
T ss_pred EEEECHHHhE
Confidence 8888776653
No 4
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=1.2e-52 Score=393.46 Aligned_cols=238 Identities=69% Similarity=1.174 Sum_probs=219.0
Q ss_pred CceeeecccCCceEEEEEEecCCCcEEEEEeecCCCceeeeCCCCCCCcccccCCcccCCCCCCceeCCceEEEEeccCe
Q 013993 76 TDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA 155 (432)
Q Consensus 76 ~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~gs 155 (432)
...+||.|+.+.+|+++|.||||||+|.|+|||||+++||++..|..+..|..|+.|+|++|+||+..++.|.+.|++|+
T Consensus 2 ~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs 81 (239)
T 1b5f_A 2 SAVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAHSMYESSDSSTYKENGTFGAIIYGTGS 81 (239)
T ss_dssp CEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCE
T ss_pred CceeeeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCCCCCCCccCCCeeeCCcEEEEEECCCc
Confidence 34689999999999999999999999999999999999999999964568999999999999999999999999999999
Q ss_pred EEEEEEEEEEEEceeEeeceeEEEEeeecccccccccccceecccccccccCCCCchhhhhhhcCCCCCCeEEEEeccCC
Q 013993 156 ISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDI 235 (432)
Q Consensus 156 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~p~~~~l~~qg~i~~~~fs~~l~~~~ 235 (432)
++|.+++|+|++++..+++|.||++....+..|....++||||||++.++ .|++++|++||+|.+++||+||++..
T Consensus 82 ~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s----~p~~~~l~~qg~i~~~~FS~~l~~~~ 157 (239)
T 1b5f_A 82 ITGFFSQDSVTIGDLVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTIS----VPVWYNMLNQGLVKERRFSFWLNRNV 157 (239)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSS----CCHHHHHHHTTCCSSSEEEEEECCSC
T ss_pred EEEEEEEEEEEECCcEEccEEEEEEEeccCccccccCcceEEecCccccc----cHHHHHHHHCCCCCCCEEEEEEeCCC
Confidence 99999999999999999999999998876555666778999999998776 67889999999999999999999864
Q ss_pred CCCCCcEEEECccCCCCCccceEEEecCCCCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHHHHHHHHHHhC
Q 013993 236 EGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIG 315 (432)
Q Consensus 236 ~~~~~G~l~fGg~D~s~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~~~~~i~~~i~ 315 (432)
+....|+|+|||+|+++|.|+++|+|+.+.+||.|.+++|.|+++.+.++..++.+||||||+++++|++++++|+++||
T Consensus 158 ~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~~~~~i~~~ig 237 (239)
T 1b5f_A 158 DEEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIG 237 (239)
T ss_dssp SSSCCEEEEETSCCGGGEEEEEEEEEEEEETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHHHHHHHHHHTT
T ss_pred CCCCCeEEEECCcChhhccCceEEEEcccCCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHHHHHHHHHHhC
Confidence 33458999999999999999999999998899999999999999987776778899999999999999999999999999
Q ss_pred Cc
Q 013993 316 AS 317 (432)
Q Consensus 316 a~ 317 (432)
|+
T Consensus 238 a~ 239 (239)
T 1b5f_A 238 AN 239 (239)
T ss_dssp CC
T ss_pred CC
Confidence 74
No 5
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=5.9e-52 Score=405.61 Aligned_cols=271 Identities=39% Similarity=0.741 Sum_probs=239.3
Q ss_pred eeeecccCCceEEEEEEecCCCcEEEEEeecCCCceeeeCCCCCCCcccccCCcccCCCCCCceeCCceEEEEeccCeEE
Q 013993 78 IVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAIS 157 (432)
Q Consensus 78 ~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~gs~~ 157 (432)
.+||.|+.|.+|+++|+||||||++.|+|||||+++||++..|. ...|..++.|++++|+||+..++.|.+.|++|+++
T Consensus 2 ~~~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 80 (320)
T 4aa9_A 2 REPLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCK-SNVCKNHHRFDPRKSSTFRNLGKPLSIHYGTGSME 80 (320)
T ss_dssp ------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEE
T ss_pred CccceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCC-ccccCCCCCCCCCCCcCeEcCCcEEEEEECCcEEE
Confidence 47999999999999999999999999999999999999999996 56899999999999999999999999999999999
Q ss_pred EEEEEEEEEEceeEeeceeEEEEeeecccccccccccceecccccccccCCCCchhhhhhhcCCCCCCeEEEEeccCCCC
Q 013993 158 GFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEG 237 (432)
Q Consensus 158 G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~p~~~~l~~qg~i~~~~fs~~l~~~~~~ 237 (432)
|.+++|+|++|+..++++.||++....+..+....++||||||++..+.....|++++|++||+|++++||+||++.
T Consensus 81 G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~--- 157 (320)
T 4aa9_A 81 GFLGYDTVTVSNIVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLVARDLFSVYMDRN--- 157 (320)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCSS---
T ss_pred EEEEEEEEEECCEeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHHHHhCCCCCCceEEEEeCCC---
Confidence 99999999999999999999999987665566677899999999998887888999999999999999999999985
Q ss_pred CCCcEEEECccCCCCCccceEEEecCCCCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHHHHHHHHHHhCCc
Q 013993 238 EEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGAS 317 (432)
Q Consensus 238 ~~~G~l~fGg~D~s~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~~~~~i~~~i~a~ 317 (432)
...|+|+|||+|+++|.|+++|+|+.+.+||.|.+++|.|+++.+. +..+..+||||||+++++|++++++|++++++.
T Consensus 158 ~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~ 236 (320)
T 4aa9_A 158 GQGSMLTLGAIDPSYYTGSLHWVPVTLQQYWQFTVDSVTINGVAVA-CVGGCQAILDTGTSVLFGPSSDILKIQMAIGAT 236 (320)
T ss_dssp SSCCEEEETCCCGGGEEEEEEEEECSSBTTBEEEECEEEETTEEEE-STTCEEEEECTTCSSEEEEHHHHHHHHHHTTCE
T ss_pred CCCeEEEEcccCHHHccCceEEEEcccCCceEEEEeEEEECCEEec-cCCCcEEEEECCCCcEECCHHHHHHHHHHhCCc
Confidence 2389999999999999999999999999999999999999998775 446789999999999999999999999999874
Q ss_pred ----ceeeecccc------ccccccceehhhhhhccCccccccccccccc
Q 013993 318 ----GVISQECKT------LVDQYGKTILEMLIAETQPQKICSQMGLCTF 357 (432)
Q Consensus 318 ----g~~~~~C~~------~v~~yg~~ii~~~~~~~~p~~ic~~~glC~~ 357 (432)
|.|..+|.. +.+.|++..+.+..+++.-+ ..+.|..
T Consensus 237 ~~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~----~~~~C~~ 282 (320)
T 4aa9_A 237 ENRYGEFDVNCGNLRSMPTVVFEINGRDYPLSPSAYTSK----DQGFCTS 282 (320)
T ss_dssp ECTTSCEEECGGGGGGCCCEEEEETTEEEEECHHHHEEE----ETTEEEE
T ss_pred ccCCCcEEEeCCCCCcCceEEEEECCEEEEECHHHhccC----CCCeEEE
Confidence 788999985 45688988888877766422 3456763
No 6
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=1.5e-51 Score=403.14 Aligned_cols=273 Identities=38% Similarity=0.729 Sum_probs=243.6
Q ss_pred CceeeecccCCceEEEEEEecCCCcEEEEEeecCCCceeeeCCCCCCCcccccCCcccCCCCCCceeCCceEEEEeccCe
Q 013993 76 TDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA 155 (432)
Q Consensus 76 ~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~gs 155 (432)
...+||.|+.+.+|+++|+||||||++.|+|||||+++||++..|. ...|..|+.|+|++|+||+..++.|.+.|++|+
T Consensus 3 ~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs 81 (323)
T 3cms_A 3 VASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIHYGTGS 81 (323)
T ss_dssp CEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEE
T ss_pred cceeeeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCC-cccccCCCCCCCccCCCeEECCcEEEEEeCCCC
Confidence 4568999999999999999999999999999999999999999995 568999999999999999999999999999999
Q ss_pred EEEEEEEEEEEEceeEeeceeEEEEeeecccccccccccceecccccccccCCCCchhhhhhhcCCCCCCeEEEEeccCC
Q 013993 156 ISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDI 235 (432)
Q Consensus 156 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~p~~~~l~~qg~i~~~~fs~~l~~~~ 235 (432)
++|.+++|+|++|+..++++.||++....+..|....++||||||++.++.....|++++|++||.|.+++||+||++..
T Consensus 82 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~ 161 (323)
T 3cms_A 82 MQGILGYDTVTVSNIVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNG 161 (323)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCTTS
T ss_pred eEEEEEEEEEEECCeEEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHHHHHHHCCCCCCCEEEEEECCCC
Confidence 99999999999999999999999999876545556678999999999988888889999999999999999999998863
Q ss_pred CCCCCcEEEECccCCCCCccceEEEecCCCCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHHHHHHHHHHhC
Q 013993 236 EGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIG 315 (432)
Q Consensus 236 ~~~~~G~l~fGg~D~s~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~~~~~i~~~i~ 315 (432)
. .|+|+|||+|+++|.|+++|+|+.+.+||.|.+++|.|+++.+. +..++.+||||||+++++|.+++++|+++++
T Consensus 162 ~---~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~ 237 (323)
T 3cms_A 162 Q---ESMLTLGAIDPSYYTGSLHWVPVTVQQYWQFTVDSVTISGVVVA-CEGGCQAILDTGTSKLVGPSSDILNIQQAIG 237 (323)
T ss_dssp S---CEEEEESCCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE-STTCEEEEECTTCCSEEECHHHHHHHHHHHT
T ss_pred C---CEEEEECCCChhhccCceEEEECccCCeEEEEEeeEEECCEEee-cCCCcEEEEecCCccEeCCHHHHHHHHHHhC
Confidence 2 49999999999999999999999999999999999999998765 4567899999999999999999999999998
Q ss_pred Cc----ceeeecccc------ccccccceehhhhhhccCccccccccccccc
Q 013993 316 AS----GVISQECKT------LVDQYGKTILEMLIAETQPQKICSQMGLCTF 357 (432)
Q Consensus 316 a~----g~~~~~C~~------~v~~yg~~ii~~~~~~~~p~~ic~~~glC~~ 357 (432)
+. +.|..+|.. +.+.|++..+.++.+++.-+ ..+.|..
T Consensus 238 ~~~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~----~~~~C~~ 285 (323)
T 3cms_A 238 ATQNQYGEFDIDCDNLSYMPTVVFEINGKMYPLTPSAYTSQ----DQGFCTS 285 (323)
T ss_dssp CEEETTTEEEECTTCTTTSCCEEEEETTEEEEECHHHHEEE----ETTEEEE
T ss_pred CeecCCCcEEEECCCCccCceEEEEECCEEEEECHHHhccC----CCCEEEE
Confidence 85 678889984 56678888887777665322 3456763
No 7
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.7e-51 Score=407.31 Aligned_cols=266 Identities=45% Similarity=0.819 Sum_probs=239.4
Q ss_pred CceeeecccCCceEEEEEEecCCCcEEEEEeecCCCceeeeCCCCCCCcccccCCcccCCCCCCceeCCceEEEEeccCe
Q 013993 76 TDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA 155 (432)
Q Consensus 76 ~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~gs 155 (432)
...+||.|+.+.+|+++|+||||||++.|+|||||+++||++..|. ...|..|+.|++++|+||+..++.|.+.|++|+
T Consensus 12 ~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs 90 (351)
T 1tzs_A 12 SAKEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCT-SPACKTHSRFQPSQSSTYSQPGQSFSIQYGTGS 90 (351)
T ss_dssp --CCTTGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCBCCSCEEEEESSSCE
T ss_pred ccceeceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-ccccCCCCcCCcccCcceEECCCEEEEEeCCCC
Confidence 4458999999999999999999999999999999999999999996 468999999999999999999999999999999
Q ss_pred EEEEEEEEEEEEceeEeeceeEEEEeeecccccccccccceecccccccccCCCCchhhhhhhcCCCCCCeEEEEeccCC
Q 013993 156 ISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDI 235 (432)
Q Consensus 156 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~p~~~~l~~qg~i~~~~fs~~l~~~~ 235 (432)
++|.+++|+|++|+..++++.||++....+..|....++||||||++.++.....|++++|++||+|.+++||+||++..
T Consensus 91 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~ 170 (351)
T 1tzs_A 91 LSGIIGADQVSVEGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNP 170 (351)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCCC
T ss_pred eEEEEEEeEEEECCeEECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHHHHHHCCCCCCCEEEEEEcCCC
Confidence 99999999999999999999999998876655666788999999999988777889999999999999999999999875
Q ss_pred CCCCCcEEEECccCCCCCccceEEEecCCCCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHHHHHHHHHHhC
Q 013993 236 EGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIG 315 (432)
Q Consensus 236 ~~~~~G~l~fGg~D~s~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~~~~~i~~~i~ 315 (432)
....+|+|+|||+|+++|.|+++|+|+.+.+||.|.|++|.|+++.+. +..++.+||||||+++++|.+++++|+++++
T Consensus 171 ~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~ 249 (351)
T 1tzs_A 171 EGGAGSELIFGGYDHSHFSGSLNWVPVTKQAYWQIALDNIQVGGTVMF-CSEGCQAIVDTGTSLITGPSDKIKQLQNAIG 249 (351)
T ss_dssp --CTTCEEEETSCCGGGBCSCCEEEECSEETTEEEEEEEEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHHHHHHT
T ss_pred CCCCCCEEEECCCCHHHcCCceEEEecCCCceEEEEeCEEEECCceEE-cCCCceEEeccCCcceeCCHHHHHHHHHHhC
Confidence 433489999999999999999999999999999999999999998753 5667899999999999999999999999998
Q ss_pred Cc---ceeeecccc------ccccccceehhhhhhcc
Q 013993 316 AS---GVISQECKT------LVDQYGKTILEMLIAET 343 (432)
Q Consensus 316 a~---g~~~~~C~~------~v~~yg~~ii~~~~~~~ 343 (432)
+. |.|..+|.. +.+.|++..+.+..+++
T Consensus 250 ~~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y 286 (351)
T 1tzs_A 250 AAPVDGEYAVECANLNVMPDVTFTINGVPYTLSPTAY 286 (351)
T ss_dssp CEECSSSEEECGGGGGGSCCEEEEETTEEEEECTTTS
T ss_pred CcccCCeEEEeCCCCccCCcEEEEECCEEEEECHHHh
Confidence 75 567889985 45678888887777665
No 8
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=3e-51 Score=404.00 Aligned_cols=280 Identities=43% Similarity=0.806 Sum_probs=244.6
Q ss_pred CCceeeecccCCceEEEEEEecCCCcEEEEEeecCCCceeeeCCCCCC-CcccccCCcccCCCCCCceeCCceEEEEecc
Q 013993 75 DTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYF-SVSCYFHSKYKSSHSSTYKRNGTSAAIQYGT 153 (432)
Q Consensus 75 ~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C~~-~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~ 153 (432)
+...+||.|+.|.+|+++|+||||||++.|+|||||+++||++..|.. ...|..++.|++++|+||+..++.|.+.|++
T Consensus 6 ~~~~~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~ 85 (341)
T 3k1w_A 6 TTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYST 85 (341)
T ss_dssp BCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEEETT
T ss_pred CCccccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCCCCCCCCcCcCeeECCCEEEEEECC
Confidence 466799999999999999999999999999999999999999999953 3479999999999999999999999999999
Q ss_pred CeEEEEEEEEEEEEceeEeeceeEEEEeeecccccccccccceecccccccccCCCCchhhhhhhcCCCCCCeEEEEecc
Q 013993 154 GAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNR 233 (432)
Q Consensus 154 gs~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~p~~~~l~~qg~i~~~~fs~~l~~ 233 (432)
|++.|.+++|+|++|+..+ ++.||++....+..+....++||||||++..+.....|++++|++||+|++++||+||++
T Consensus 86 gs~~G~~~~D~v~ig~~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~ 164 (341)
T 3k1w_A 86 GTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNR 164 (341)
T ss_dssp EEEEEEEEEEEEEETTEEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHHHTCBSSSEEEEEECC
T ss_pred cEEEEEEEEEEEEECCcee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCCHHHHHHHCCCCCCCEEEEEEeC
Confidence 9999999999999999999 999999998776546667789999999999887788899999999999999999999998
Q ss_pred CC--CCCCCcEEEECccCCCCCccceEEEecCCCCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHHHHHHHH
Q 013993 234 DI--EGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQIN 311 (432)
Q Consensus 234 ~~--~~~~~G~l~fGg~D~s~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~~~~~i~ 311 (432)
.. ....+|+|+|||+|+++|.|+++|+|+.+.+||.|.+++|.|+++.+. +..+..+||||||+++++|.+++++|+
T Consensus 165 ~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i~ 243 (341)
T 3k1w_A 165 DSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKLM 243 (341)
T ss_dssp CC-----CCEEEEESSCCGGGEEEEEEEEECSSTTSCEEEECCEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHHH
T ss_pred CCCcCCCCCCEEEECccChHHccCceEEEecCCCCEEEEEEeEEEECCEEee-cCCCCEEEEECCCChhcCCHHHHHHHH
Confidence 74 223489999999999999999999999999999999999999998653 456789999999999999999999999
Q ss_pred HHhCCc----ceeeecccc------ccccccceehhhhhhccCccccccccccccc
Q 013993 312 HAIGAS----GVISQECKT------LVDQYGKTILEMLIAETQPQKICSQMGLCTF 357 (432)
Q Consensus 312 ~~i~a~----g~~~~~C~~------~v~~yg~~ii~~~~~~~~p~~ic~~~glC~~ 357 (432)
+++++. | |..+|.. +.+.|++..+.+...++.-...-...+.|..
T Consensus 244 ~~~~~~~~~~g-~~~~C~~~~~~p~i~f~f~g~~~~l~~~~~~~~~~~~~~~~C~~ 298 (341)
T 3k1w_A 244 EALGAKKRLFD-YVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTL 298 (341)
T ss_dssp HHHTCEECSSC-EEEEGGGGGGCCCEEEEETTEEEEECHHHHBCCSCCCTTSEEEB
T ss_pred HHcCCeecCCC-eEEeCCCCCcCCcEEEEECCEEEEECHHHheeEccCCCCCeEEe
Confidence 999875 6 8899984 4668899888887766532211112456764
No 9
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=3.8e-51 Score=401.41 Aligned_cols=265 Identities=43% Similarity=0.811 Sum_probs=238.0
Q ss_pred ceeeecccCCceEEEEEEecCCCcEEEEEeecCCCceeeeCCCCCCCcccccCCcccCCCCCCceeCCceEEEEeccCeE
Q 013993 77 DIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAI 156 (432)
Q Consensus 77 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~gs~ 156 (432)
..+||.|+.+.+|+++|+||||||++.|+|||||+++||++..|. ...|..|+.|++++|+||+..++.|.+.|++|++
T Consensus 3 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~ 81 (329)
T 1dpj_A 3 HDVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECG-SLACFLHSKYDHEASSSYKANGTEFAIQYGTGSL 81 (329)
T ss_dssp EEEECEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEE
T ss_pred cceeeeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCC-CcccCCcCcCCcccCcCeEECCcEEEEEECCceE
Confidence 458999999999999999999999999999999999999999996 4579999999999999999999999999999999
Q ss_pred EEEEEEEEEEEceeEeeceeEEEEeeecccccccccccceecccccccccCCCCchhhhhhhcCCCCCCeEEEEeccCCC
Q 013993 157 SGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIE 236 (432)
Q Consensus 157 ~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~p~~~~l~~qg~i~~~~fs~~l~~~~~ 236 (432)
+|.+++|+|++|+..++++.||+++...+..|....++||||||++.++..+..|++++|++||+|++++||+||++...
T Consensus 82 ~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~ 161 (329)
T 1dpj_A 82 EGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSK 161 (329)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGG
T ss_pred EEEEEEEEEEECCeEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCC
Confidence 99999999999999999999999998765445566789999999999887778889999999999999999999987532
Q ss_pred -CCCCcEEEECccCCCCCccceEEEecCCCCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHHHHHHHHHHhC
Q 013993 237 -GEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIG 315 (432)
Q Consensus 237 -~~~~G~l~fGg~D~s~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~~~~~i~~~i~ 315 (432)
...+|+|+|||+|+++|.|+++|+|+.+..||.|.+++|.|+++.+. ..++.+||||||+++++|.+++++|+++++
T Consensus 162 ~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~ 239 (329)
T 1dpj_A 162 DTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAE--LESHGAAIDTGTSLITLPSGLAEMINAEIG 239 (329)
T ss_dssp TCSSSEEEEESSCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE--CSSCEEEECTTCSCEEECHHHHHHHHHHHT
T ss_pred CCCCCcEEEEcCCChhhcCCceEEEEcCCCceEEEEeeeEEECCeEec--CCCccEEeeCCCCcEECCHHHHHHHHHHhC
Confidence 23479999999999999999999999999999999999999998764 356899999999999999999999999998
Q ss_pred Cc----ceeeecccc------ccccccceehhhhhhccC
Q 013993 316 AS----GVISQECKT------LVDQYGKTILEMLIAETQ 344 (432)
Q Consensus 316 a~----g~~~~~C~~------~v~~yg~~ii~~~~~~~~ 344 (432)
+. +.|..+|.. +.+.|++..+.+..+++.
T Consensus 240 ~~~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~ 278 (329)
T 1dpj_A 240 AKKGWTGQYTLDCNTRDNLPDLIFNFNGYNFTIGPYDYT 278 (329)
T ss_dssp CEECTTSSEEECGGGGGGCCCEEEEETTEEEEECTTTSE
T ss_pred CccCCCCeEEEECCCCCcCCcEEEEECCEEEEECHHHhE
Confidence 74 678889984 556788888877776653
No 10
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=2e-51 Score=417.39 Aligned_cols=272 Identities=30% Similarity=0.527 Sum_probs=240.4
Q ss_pred CCceeeecccCCceEEEEEEecCCCcEEEEEeecCCCceeeeCCCCCCCcccccCCcccCCCCCCceeCCceEEEEeccC
Q 013993 75 DTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTG 154 (432)
Q Consensus 75 ~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~g 154 (432)
....+||.|+.|.+|+++|+||||||++.|++||||+++||++..|. +..|..++.|+|++|+||+..++.|.+.|++|
T Consensus 125 ~~~~~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~-s~~C~~~~~ydps~SsT~~~~~~~f~i~YgdG 203 (451)
T 3qvc_A 125 EFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCT-SESCESKNHYDSSKSKTYEKDDTPVKLTSKAG 203 (451)
T ss_dssp --CCCCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEECSSE
T ss_pred cCCccceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-ccccCCCCCCCCCCCcccccCCCEEEEEECCC
Confidence 45678999999999999999999999999999999999999999996 56899999999999999999999999999999
Q ss_pred eEEEEEEEEEEEEceeEeeceeEEEEee----ecccccccccccceecccccccccCCCCchhhhhhhcCCCCCCeEEEE
Q 013993 155 AISGFFSQDNVKVGDLVVKNQDFIEATK----EASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFW 230 (432)
Q Consensus 155 s~~G~~~~D~v~ig~~~~~~~~fg~~~~----~~~~~~~~~~~~GilGLg~~~~s~~~~~p~~~~l~~qg~i~~~~fs~~ 230 (432)
+++|.+++|+|++|+..++ +.||++.. .++ |....++||||||++..+.....|++++|++||+|++++||+|
T Consensus 204 s~~G~~~~Dtv~igg~~v~-~~Fg~a~~t~~~~~~--f~~~~~dGILGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~ 280 (451)
T 3qvc_A 204 TISGIFSKDLVTIGKLSVP-YKFIEMTEIVGFEPF--YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIY 280 (451)
T ss_dssp EEEEEEEEEEEEETTEEEE-EEEEEEEEEEECTTH--HHHSCCCEEEECSSBCSSSSCCCCHHHHHHHTTSSSSSEEEEE
T ss_pred EEEEEEEEEEEEECCEEEE-EEEEEEEeccccCCC--ccCCCCCEEEecCCCcccccCCCCHHHHHHHcCCCCCCEEEEE
Confidence 9999999999999999999 99999987 544 5566789999999999888778899999999999999999999
Q ss_pred eccCCCCCCCcEEEECccCCCCCccceEEEecCCCCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHHHHHHH
Q 013993 231 LNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQI 310 (432)
Q Consensus 231 l~~~~~~~~~G~l~fGg~D~s~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~~~~~i 310 (432)
|++.. ..+|+|+|||+|+++|.|+++|+|+.+.+||.|.++ |.|++. +..++.+|+||||+++++|++++++|
T Consensus 281 L~~~~--~~~G~l~fGgiD~s~y~G~l~~~pv~~~~~w~v~l~-I~Vgg~----~~~~~~aiiDSGTt~i~lP~~~~~~i 353 (451)
T 3qvc_A 281 LPPEN--KNKGYLTIGGIEERFFDGPLNYEKLNHDLMWQVDLD-VHFGNV----SSKKANVILDSATSVITVPTEFFNQF 353 (451)
T ss_dssp CCTTC--TTEEEEEESSCCGGGEEEEEEEEECSSTTSSEEEEE-EEETTE----EEEEEEEEECTTBSSEEECHHHHHHH
T ss_pred EcCCC--CCCCEEEECCcchhhcCCceEEEEcccCCeeEEEEE-EEECCc----cCCCceEEEeCCCccccCCHHHHHHH
Confidence 99873 238999999999999999999999999999999999 999998 34578999999999999999999999
Q ss_pred HHHhCCc-----ceeeeccc-----cccccccceehhhhhhccCccccccccccccc
Q 013993 311 NHAIGAS-----GVISQECK-----TLVDQYGKTILEMLIAETQPQKICSQMGLCTF 357 (432)
Q Consensus 311 ~~~i~a~-----g~~~~~C~-----~~v~~yg~~ii~~~~~~~~p~~ic~~~glC~~ 357 (432)
++++++. |.|..+|. .+.+.||+..+.++.+++.-...-...+.|..
T Consensus 354 ~~~i~a~~~~~~g~y~v~C~~~~~P~itf~fgg~~i~lp~~~yi~~~~~~~~~~C~~ 410 (451)
T 3qvc_A 354 VESASVFKVPFLSLYVTTCGNTKLPTLEYRSPNKVYTLEPKQYLEPLENIFSALCML 410 (451)
T ss_dssp HTTTTCEECTTSSCEEEETTCTTCCCEEEEETTEEEEECHHHHEEECTTTSTTEEEE
T ss_pred HHHcCCeecCCCCeEEeeCCcCcCCcEEEEECCEEEEEcHHHheeecccCCCCeEEE
Confidence 9999874 78899997 45678999888888776532211113456764
No 11
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=5.8e-51 Score=400.09 Aligned_cols=273 Identities=41% Similarity=0.779 Sum_probs=242.0
Q ss_pred eeeecccCCceEEEEEEecCCCcEEEEEeecCCCceeeeCCCCCCCcccccCCcccCCCCCCceeCCceEEEEeccCeEE
Q 013993 78 IVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAIS 157 (432)
Q Consensus 78 ~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~gs~~ 157 (432)
.+||+ +.+.+|+++|.||||||++.|+|||||+++||++..|. +..|..++.|++++|+||+..++.|.+.|++|++.
T Consensus 4 ~~~l~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 81 (329)
T 1htr_B 4 YEPMA-YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSLT 81 (329)
T ss_dssp CCGGG-GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEE
T ss_pred eeeeE-EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-CcccCCCCcCCCccCCCeEECCcEEEEEeCCCCeE
Confidence 47888 88999999999999999999999999999999999996 45799999999999999999999999999999999
Q ss_pred EEEEEEEEEEceeEeeceeEEEEeeecccccccccccceecccccccccCCCCchhhhhhhcCCCCCCeEEEEeccCCCC
Q 013993 158 GFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEG 237 (432)
Q Consensus 158 G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~p~~~~l~~qg~i~~~~fs~~l~~~~~~ 237 (432)
|.+++|+|++|+..++++.||++....+..|....++||||||++..+.....|++++|++||+|.+++||+||++....
T Consensus 82 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~ 161 (329)
T 1htr_B 82 GFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQGS 161 (329)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHHTTCSSSSEEEEEECSSCSS
T ss_pred EEEEeeeEEEcceEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHHHhcCCCCCCEEEEEEcCCCCC
Confidence 99999999999999999999999987665566677899999999998887788999999999999999999999986432
Q ss_pred CCCcEEEECccCCCCCccceEEEecCCCCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHHHHHHHHHHhCCc
Q 013993 238 EEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGAS 317 (432)
Q Consensus 238 ~~~G~l~fGg~D~s~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~~~~~i~~~i~a~ 317 (432)
.+|+|+|||+|+++|+|+++|+|+.+.+||.|.+++|.|+++.+..+..++.+||||||+++++|++++++|++++++.
T Consensus 162 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 240 (329)
T 1htr_B 162 -SGGAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQ 240 (329)
T ss_dssp -EEEEEEESSCCGGGEEEEEEEEEBCSSSSCEEEECEEEETTEECCTTTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCE
T ss_pred -CCcEEEEcccCHHHcCCceEEEECCCCceEEEEEeEEEECCceeeecCCCceEEEecCCccEECCHHHHHHHHHHhCCe
Confidence 3799999999999999999999999999999999999999987643456789999999999999999999999999874
Q ss_pred ----ceeeecccc------ccccccceehhhhhhccCccccccccccccc
Q 013993 318 ----GVISQECKT------LVDQYGKTILEMLIAETQPQKICSQMGLCTF 357 (432)
Q Consensus 318 ----g~~~~~C~~------~v~~yg~~ii~~~~~~~~p~~ic~~~glC~~ 357 (432)
|.|..+|.. +.+.|++..+.+..+++.-+. . |.|..
T Consensus 241 ~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~---~-g~C~~ 286 (329)
T 1htr_B 241 EDEYGQFLVNCNSIQNLPSLTFIINGVEFPLPPSSYILSN---N-GYCTV 286 (329)
T ss_dssp ECTTSCEEECGGGGGGSCCEEEEETTEEEEECHHHHEEEC---S-SCEEE
T ss_pred ecCCCeEEEeCCCcccCCcEEEEECCEEEEECHHHhcccC---C-CEEEE
Confidence 678899984 456788888887776653221 1 57864
No 12
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=7.1e-51 Score=405.81 Aligned_cols=258 Identities=33% Similarity=0.655 Sum_probs=234.8
Q ss_pred CCceeeecccCCceEEEEEEecCCCcEEEEEeecCCCceeeeCCCCCCCcccccCCcccCCCCCCceeCCceEEEEeccC
Q 013993 75 DTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTG 154 (432)
Q Consensus 75 ~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~g 154 (432)
....+||.|+.+.+|+++|+||||||++.|+|||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|
T Consensus 50 ~~~~~pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 128 (375)
T 1miq_A 50 ENDVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCN-SSGCSIKNLYDSSKSKSYEKDGTKVDITYGSG 128 (375)
T ss_dssp TTBCCCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCC-SSGGGGSCCBCGGGCTTCEEEEEEEEEEETTE
T ss_pred CcceEEcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCC-cccccCCCcCCCccCCceEECCcEEEEEeCCC
Confidence 34568999999999999999999999999999999999999999996 56899999999999999999999999999999
Q ss_pred eEEEEEEEEEEEEceeEeeceeEEEEee----ecccccccccccceecccccccccCCCCchhhhhhhcCCCCCCeEEEE
Q 013993 155 AISGFFSQDNVKVGDLVVKNQDFIEATK----EASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFW 230 (432)
Q Consensus 155 s~~G~~~~D~v~ig~~~~~~~~fg~~~~----~~~~~~~~~~~~GilGLg~~~~s~~~~~p~~~~l~~qg~i~~~~fs~~ 230 (432)
+++|.+++|+|++|+..+++ .||++.. .+ .|....++||||||++.++.....|++++|++||+|.+++||+|
T Consensus 129 s~~G~~~~Dtv~ig~~~v~~-~Fg~~~~~~~~~~--~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~ 205 (375)
T 1miq_A 129 TVKGFFSKDLVTLGHLSMPY-KFIEVTDTDDLEP--IYSSVEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFY 205 (375)
T ss_dssp EEEEEEEEEEEEETTEEEEE-EEEEEEECGGGTT--HHHHSCCCEEEECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEE
T ss_pred eEEEEEEEEEEEEcCceECc-EEEEEEecccccc--ccccCCCceEEeCCCCcccccCCCCHHHHHHhccCcCCCEEEEE
Confidence 99999999999999999999 9999987 43 45556789999999999888888899999999999999999999
Q ss_pred eccCCCCCCCcEEEECccCCCCCccceEEEecCCCCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHHHHHHH
Q 013993 231 LNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQI 310 (432)
Q Consensus 231 l~~~~~~~~~G~l~fGg~D~s~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~~~~~i 310 (432)
|++.. ..+|+|+|||+|+++|.|+++|+|+.+.+||.|.++ |.|+++.+ .++.|||||||+++++|.+++++|
T Consensus 206 L~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~-i~v~g~~~----~~~~aiiDSGTs~~~lP~~~~~~l 278 (375)
T 1miq_A 206 LPVHD--VHAGYLTIGGIEEKFYEGNITYEKLNHDLYWQIDLD-VHFGKQTM----EKANVIVDSGTTTITAPSEFLNKF 278 (375)
T ss_dssp CCTTC--TTEEEEEESSCCGGGEEEEEEEEEBSSSSSSEEEEE-EEETTEEE----EEEEEEECTTBSSEEECHHHHHHH
T ss_pred ecCCC--CCCeEEEEcccCHHHcCCceEEEecCCCceEEEEEE-EEECCEEc----ccceEEecCCCccEEcCHHHHHHH
Confidence 99863 248999999999999999999999999999999999 99999876 467899999999999999999999
Q ss_pred HHHhCCc-----ceeeecccc-----ccccccceehhhhhhcc
Q 013993 311 NHAIGAS-----GVISQECKT-----LVDQYGKTILEMLIAET 343 (432)
Q Consensus 311 ~~~i~a~-----g~~~~~C~~-----~v~~yg~~ii~~~~~~~ 343 (432)
++++++. |.|..+|.. +.+.||+..+.+..+++
T Consensus 279 ~~~~~~~~~~~~g~~~~~C~~~~~P~i~f~f~g~~~~l~~~~y 321 (375)
T 1miq_A 279 FANLNVIKVPFLPFYVTTCDNKEMPTLEFKSANNTYTLEPEYY 321 (375)
T ss_dssp HHHHTCEECTTSSCEEEETTCTTCCCEEEECSSCEEEECGGGS
T ss_pred HHHhCCcccCCCCeEEEECCCCCCCcEEEEECCEEEEECHHHh
Confidence 9999983 678899985 56678888888777665
No 13
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=7.5e-51 Score=398.45 Aligned_cols=271 Identities=38% Similarity=0.698 Sum_probs=241.3
Q ss_pred eeeecccCCceEEEEEEecCCCcEEEEEeecCCCceeeeCCCCCCCcccccCCcccCCCCCCceeCCceEEEEeccCeEE
Q 013993 78 IVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAIS 157 (432)
Q Consensus 78 ~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~gs~~ 157 (432)
.+||.|+.+.+|+++|+||||||++.|+|||||+++||++..|. +..|..|+.|++++|+||+..++.|.+.|++|++.
T Consensus 3 ~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~ 81 (324)
T 1am5_A 3 TEQMKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCS-AQACSNHNKFKPRQSSTYVETGKTVDLTYGTGGMR 81 (324)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEE
T ss_pred eeeeecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-cccccCCCcCCCccCCCeEeCCcEEEEEECCCCeE
Confidence 47999999999999999999999999999999999999999996 45799999999999999999999999999999999
Q ss_pred EEEEEEEEEEceeEeeceeEEEEeeecccccccccccceecccccccccCCCCchhhhhhhcCCCCCCeEEEEeccCCCC
Q 013993 158 GFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEG 237 (432)
Q Consensus 158 G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~p~~~~l~~qg~i~~~~fs~~l~~~~~~ 237 (432)
|.+++|+|++|+..++++.||++....+..|....++||||||++..+.....|++++|++||+|.+++||+||++...
T Consensus 82 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~- 160 (324)
T 1am5_A 82 GILGQDTVSVGGGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGA- 160 (324)
T ss_dssp EEEEEEEEESSSSCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEECCSTTC-
T ss_pred EEEEECceeECCcEEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHhHHhcCCCCCCEEEEEecCCCC-
Confidence 9999999999999999999999998766556567789999999999887778899999999999999999999988632
Q ss_pred CCCcEEEECccCCCCCccceEEEecCCCCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHHHHHHHHHHhCCc
Q 013993 238 EEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGAS 317 (432)
Q Consensus 238 ~~~G~l~fGg~D~s~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~~~~~i~~~i~a~ 317 (432)
.+|+|+|||+|+++|.|+++|+|+.+.+||.|.+++|.|+++.+. +.+ +.+||||||+++++|++++++|++++++.
T Consensus 161 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 237 (324)
T 1am5_A 161 -NGSEVMLGGVDNSHYTGSIHWIPVTAEKYWQVALDGITVNGQTAA-CEG-CQAIVDTGTSKIVAPVSALANIMKDIGAS 237 (324)
T ss_dssp -SCEEEEESSCCGGGBCSCCEEEEEEEETTEEEEECEEEETTEECC-CCC-EEEEECTTCSSEEECTTTHHHHHHHHTCE
T ss_pred -CCcEEEECccCHHHcCCceEEEecCCCcEEEEEEeEEEECCceee-ccC-ceEEEecCCccEECCHHHHHHHHHHhCCc
Confidence 389999999999999999999999988999999999999998753 334 89999999999999999999999999874
Q ss_pred ---ceeeecccc------ccccccceehhhhhhccCccccccccccccc
Q 013993 318 ---GVISQECKT------LVDQYGKTILEMLIAETQPQKICSQMGLCTF 357 (432)
Q Consensus 318 ---g~~~~~C~~------~v~~yg~~ii~~~~~~~~p~~ic~~~glC~~ 357 (432)
|.|..+|.. +.+.|++..+.+..+++.-+. .+.|..
T Consensus 238 ~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~----~~~C~~ 282 (324)
T 1am5_A 238 ENQGEMMGNCASVQSLPDITFTINGVKQPLPPSAYIEGD----QAFCTS 282 (324)
T ss_dssp ECCCCEECCTTSSSSSCCEEEEETTEEEEECHHHHEEES----SSCEEE
T ss_pred ccCCcEEEeCCCcccCCcEEEEECCEEEEECHHHhcccC----CCeEEE
Confidence 668899984 566788888887776653221 456763
No 14
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=3.9e-50 Score=407.52 Aligned_cols=259 Identities=32% Similarity=0.604 Sum_probs=235.6
Q ss_pred CceeeecccCCceEEEEEEecCCCcEEEEEeecCCCceeeeCCCCCCCcccccCCcccCCCCCCceeCCceEEEEeccCe
Q 013993 76 TDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA 155 (432)
Q Consensus 76 ~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~gs 155 (432)
...+||.|+.+.+|+++|+||||||++.|+|||||+++||++..|. +..|..++.|+|++|+||+..++.|.+.|++|+
T Consensus 127 ~~~~~L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~-~~~C~~~~~ydps~SsT~~~~~~~~~i~YgdGs 205 (453)
T 2bju_A 127 NDNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCT-TAGCLTKHLYDSSKSRTYEKDGTKVEMNYVSGT 205 (453)
T ss_dssp SEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-STTGGGSCCBCGGGCTTCEEEEEEEEEECSSSE
T ss_pred CCceeeEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCC-ccccCCCCcCCCccCCceeECCcEEEEEcCCCC
Confidence 4569999999999999999999999999999999999999999996 568999999999999999999999999999999
Q ss_pred EEEEEEEEEEEEceeEeeceeEEEEeeec--ccccccccccceecccccccccCCCCchhhhhhhcCCCCCCeEEEEecc
Q 013993 156 ISGFFSQDNVKVGDLVVKNQDFIEATKEA--SITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNR 233 (432)
Q Consensus 156 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~--~~~~~~~~~~GilGLg~~~~s~~~~~p~~~~l~~qg~i~~~~fs~~l~~ 233 (432)
++|.+++|+|++|+..++ |.||++.... +..+....++||||||++.++.....|++++|++||+|++++||+||++
T Consensus 206 ~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~~ 284 (453)
T 2bju_A 206 VSGFFSKDLVTVGNLSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLPV 284 (453)
T ss_dssp EEEEEEEEEEEETTEEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHHHHHHHTTSSSSCEEEEECCB
T ss_pred eEEEEEEEEEEEeCcEEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHHHHHHHCCCCCCCEEEEEeCC
Confidence 999999999999999999 9999999876 5445566789999999999888778899999999999999999999998
Q ss_pred CCCCCCCcEEEECccCCCCCccceEEEecCCCCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHHHHHHHHHH
Q 013993 234 DIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHA 313 (432)
Q Consensus 234 ~~~~~~~G~l~fGg~D~s~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~~~~~i~~~ 313 (432)
.+ ..+|+|+|||+|+++|.|+++|+|+.+.+||.|.++ |.|++ .+ + .++.+|+||||+++++|.+++++|+++
T Consensus 285 ~~--~~~G~l~fGg~D~~~y~G~l~~~pv~~~~~w~V~l~-I~Vgg-~~--~-~~~~aIiDSGTsl~~lP~~~~~~l~~~ 357 (453)
T 2bju_A 285 HD--KHTGFLTIGGIEERFYEGPLTYEKLNHDLYWQITLD-AHVGN-IM--L-EKANCIVDSGTSAITVPTDFLNKMLQN 357 (453)
T ss_dssp TT--TBCEEEEESSCCGGGEEEEEEEEEEEEETTEEEEEE-EEETT-EE--E-EEEEEEECTTCCSEEECHHHHHHHTTT
T ss_pred CC--CCCeEEEECCCCHHHcCCceEEEecCCCceEEEEEE-EEECc-EE--e-ccccEEEcCCCCeEecCHHHHHHHHHH
Confidence 63 348999999999999999999999999999999999 99999 33 2 578999999999999999999999999
Q ss_pred hCCc----c-eeeecccc-----ccccccceehhhhhhcc
Q 013993 314 IGAS----G-VISQECKT-----LVDQYGKTILEMLIAET 343 (432)
Q Consensus 314 i~a~----g-~~~~~C~~-----~v~~yg~~ii~~~~~~~ 343 (432)
+++. | .|..+|.. +.+.||+..+.++.+++
T Consensus 358 i~~~~~~~g~~~~v~C~~~~~P~itf~fgg~~~~l~~~~y 397 (453)
T 2bju_A 358 LDVIKVPFLPFYVTLCNNSKLPTFEFTSENGKYTLEPEYY 397 (453)
T ss_dssp SSCEECTTSSCEEEETTCTTCCCEEEECSSCEEEECHHHH
T ss_pred hCCcccCCCceEEEecCCCCCCcEEEEECCEEEEECHHHh
Confidence 9874 6 78899985 56678888888777665
No 15
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=2.9e-49 Score=392.86 Aligned_cols=264 Identities=30% Similarity=0.511 Sum_probs=234.3
Q ss_pred CceeeecccCCceEEEEEEecCCCcEEEEEeecCCCceeeeCCCCCCCcccccCCcccCCCCCCceeCCceEEEEeccCe
Q 013993 76 TDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA 155 (432)
Q Consensus 76 ~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~gs 155 (432)
...+||.|+.+.+|+++|+||||||++.|+|||||+++||++..|.....|..++.|+|++|+||+..++.|.+.|++|+
T Consensus 7 ~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs 86 (361)
T 1mpp_A 7 VDTPGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKETDYNLNITYGTGG 86 (361)
T ss_dssp EEEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSSCCBCGGGCTTCEEEEEEEEEECSSCE
T ss_pred cceEEeecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCCCcCCCccCCceEecCCeEEEEECCce
Confidence 45689999999999999999999999999999999999999999952358999999999999999999999999999999
Q ss_pred EEEEEEEEEEEEceeEeeceeEEEEeeecc-----cccccccccceecccccccccCC------CCchhhhhhhcCCCCC
Q 013993 156 ISGFFSQDNVKVGDLVVKNQDFIEATKEAS-----ITFLAAKFDGILGLGFQEISIGK------AIPVWYNMLDQGLVKE 224 (432)
Q Consensus 156 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~-----~~~~~~~~~GilGLg~~~~s~~~------~~p~~~~l~~qg~i~~ 224 (432)
+.|.+++|+|++|+..++++.||++....+ ..|....++||||||++.++... ..|++++|++||+|.+
T Consensus 87 ~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~ 166 (361)
T 1mpp_A 87 ANGIYFRDSITVGGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLISS 166 (361)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSSS
T ss_pred EEEEEEEEEEEECCEEEeceEEEEEEeccCccccccccccCCCCCEEEeCCcccccccccccccCCCHHHHHHHcCCCCC
Confidence 999999999999999999999999998765 34556678999999999877544 7889999999999999
Q ss_pred CeEEEEeccCCCCCCCcEEEECccCCCCCccceEEEecCCCC----cceEEeceEEECCeeeeecCCCceEE-EcCCCcC
Q 013993 225 PVFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKG----YWQFEMGDVLIDGETTGYCSTGCNAI-ADSGTSL 299 (432)
Q Consensus 225 ~~fs~~l~~~~~~~~~G~l~fGg~D~s~~~g~l~~~pv~~~~----~w~v~l~~i~v~~~~~~~~~~~~~ai-iDTGts~ 299 (432)
++||+||++. ...|+|+|||+|+++|.|+++|+|+.+.. ||.|.|++|.|+++.+. +..++.+| |||||++
T Consensus 167 ~~FS~~l~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~-~~~~~~ai~iDSGTt~ 242 (361)
T 1mpp_A 167 PVFSVYMNTN---DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAV-SFDGAQAFTIDTGTNF 242 (361)
T ss_dssp SEEEEECCCS---SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEEE-EEEEEEEEEEETTCCS
T ss_pred cEEEEEecCC---CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEEECCeeec-cCCCCEEEEECCCCCc
Confidence 9999999885 23799999999999999999999998765 99999999999998764 34567899 9999999
Q ss_pred cccCHHHHHHHHHHhCCc-----ceeeecccc-------ccccc--c-----ceehhhhhhcc
Q 013993 300 LAGPTTIITQINHAIGAS-----GVISQECKT-------LVDQY--G-----KTILEMLIAET 343 (432)
Q Consensus 300 ~~lP~~~~~~i~~~i~a~-----g~~~~~C~~-------~v~~y--g-----~~ii~~~~~~~ 343 (432)
+++|.+++++|++++++. |.|..+|.. +.+.| | +..+.+..+++
T Consensus 243 ~~lP~~~~~~l~~~~~~~~~~~~g~~~~~C~~~~~~~p~i~f~f~~g~~~~~g~~~~i~~~~y 305 (361)
T 1mpp_A 243 FIAPSSFAEKVVKAALPDATESQQGYTVPCSKYQDSKTTFSLVLQKSGSSSDTIDVSVPISKM 305 (361)
T ss_dssp EEEEHHHHHHHHHHHCTTCEEETTEEEEEHHHHTTCCCEEEEEEECTTCSSCEEEEEEEGGGG
T ss_pred eeCCHHHHHHHHHHhCCcccCCCCcEEEECCCcccCCCcEEEEEEcCCcCCCCeEEEECHHHh
Confidence 999999999999999984 678899974 34567 7 77777777665
No 16
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=3.4e-49 Score=387.48 Aligned_cols=270 Identities=28% Similarity=0.444 Sum_probs=237.9
Q ss_pred CceeeecccCCceEEEEEEecCCCcEEEEEeecCCCceeeeCCCCCCCccc--ccCCcccCCCCCCceeCCceEEEEecc
Q 013993 76 TDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSC--YFHSKYKSSHSSTYKRNGTSAAIQYGT 153 (432)
Q Consensus 76 ~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C~~~~~C--~~~~~y~~~~SsT~~~~~~~~~~~Y~~ 153 (432)
...+||.|+.+.+|+++|+|| ||++.|+|||||+++||++..|. ...| ..|+.|+|++| ||+..++.|.+.|++
T Consensus 6 ~~~~~l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~~~y~~~~S-T~~~~~~~~~i~Yg~ 81 (330)
T 1yg9_A 6 PLYKLVHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECV-GGACVCPNLQKYEKLKP-KYISDGNVQVKFFDT 81 (330)
T ss_dssp CSCSCEEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCC-SGGGGSTTCCCCCCSSC-EEEEEEEEEEEETTT
T ss_pred eeEeeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-CccCcccccCccCCCCC-ceEECCCEEEEEECC
Confidence 445799999999999999999 89999999999999999999996 4689 88999999999 999999999999999
Q ss_pred CeEEEEEEEEEEEEceeEeeceeEEEEeeecccccccccccceecccccccc-cCCCCchhhhhhhcCCCCCCeEEEEec
Q 013993 154 GAISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS-IGKAIPVWYNMLDQGLVKEPVFSFWLN 232 (432)
Q Consensus 154 gs~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s-~~~~~p~~~~l~~qg~i~~~~fs~~l~ 232 (432)
|++.|.+++|+|++|+..+++|.||++... +..|....++||||||++..+ .....|++++|++||+| +++||+||+
T Consensus 82 Gs~~G~~~~Dtv~ig~~~~~~~~fg~~~~~-~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i-~~~FS~~l~ 159 (330)
T 1yg9_A 82 GSAVGRGIEDSLTISQLTTSQQDIVLADEL-SQEVCILSADVVVGIAAPGCPNALKGKTVLENFVEENLI-APVFSIHHA 159 (330)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEEEEEEEE-CTHHHHTTCSEEEECSCTTSCCTTSCCCHHHHHHHTTSS-CSEEEEEEE
T ss_pred ceEEEEEEEEEEEECCEEEcCeEEEEEEEc-ccccccccCceEEEcCcchhccccCCCCHHHHHHhcCCC-CceEEEEEc
Confidence 999999999999999999999999999987 444556678999999999887 66778899999999999 999999999
Q ss_pred cCCCCCCCcEEEECccCCCCCccceEEEecCCCCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHHHHHHHHH
Q 013993 233 RDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINH 312 (432)
Q Consensus 233 ~~~~~~~~G~l~fGg~D~s~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~~~~~i~~ 312 (432)
+..+...+|+|+|||+|+++|+|+++|+|+.+.+||.|.+++|.|+++.+. ..++.+|+||||+++++|++++++|++
T Consensus 160 ~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~--~~~~~aiiDSGTs~~~lP~~~~~~l~~ 237 (330)
T 1yg9_A 160 RFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGDDSWKFRLDGVKIGDTTVA--PAGTQAIIDTSKAIIVGPKAYVNPINE 237 (330)
T ss_dssp ECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCTTSCCEECSEEEETTEEEE--CTTCEEEECTTCSSEEEEHHHHHHHHH
T ss_pred CCCCCCCCCEEEECCcCHHHccCceEEEECCCCCEEEEEeCeEEECCEEEc--CCCcEEEEecCCccccCCHHHHHHHHH
Confidence 874333479999999999999999999999999999999999999998764 567899999999999999999999999
Q ss_pred HhCCc----c--ee-eecccc------ccccccceehhhhhhccCccccccccccccc
Q 013993 313 AIGAS----G--VI-SQECKT------LVDQYGKTILEMLIAETQPQKICSQMGLCTF 357 (432)
Q Consensus 313 ~i~a~----g--~~-~~~C~~------~v~~yg~~ii~~~~~~~~p~~ic~~~glC~~ 357 (432)
++++. | .| ..+|.. +.+.||+..+.++.+++.-+. .+.|..
T Consensus 238 ~~~~~~~~~g~~~~~~~~C~~~~~~p~i~f~fgg~~~~l~~~~y~~~~----~~~C~~ 291 (330)
T 1yg9_A 238 AIGCVVEKTTTRRICKLDCSKIPSLPDVTFVINGRNFNISSQYYIQQN----GNLCYS 291 (330)
T ss_dssp HHTCEEEECSSCEEEEECGGGGGGSCCEEEEETTEEEEECHHHHEEEE----TTEEEE
T ss_pred HhCCcccCCCceEEEEEECCCccccCcEEEEECCEEEEECHHHhcccC----CCcEEE
Confidence 99885 5 67 889985 456788888888776663221 456763
No 17
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=1.5e-47 Score=375.06 Aligned_cols=254 Identities=35% Similarity=0.653 Sum_probs=221.0
Q ss_pred ccCCceEEEEEEecCCCcEEEEEeecCCCceeeeCCCCCCCcccccCCcccCCCCCCceeCCceEEEEeccCe-EEEEEE
Q 013993 83 NFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA-ISGFFS 161 (432)
Q Consensus 83 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~gs-~~G~~~ 161 (432)
++.+.+|+++|+||||||++.|+|||||+++||++..|..+ |..++.|+|++|+||+..++.|.+.|++|+ +.|.++
T Consensus 11 ~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c--~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~~G~~~ 88 (325)
T 2apr_A 11 YGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC--GSGQTKYDPNQSSTYQADGRTWSISYGDGSSASGILA 88 (325)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC--CTTSCCBCGGGCTTCEEEEEEEEEECTTSCEEEEEEE
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH--hcCCCCCCcccCCCeeeCCCEEEEEECCCCCEEEEEE
Confidence 55689999999999999999999999999999999999743 778899999999999999999999999998 799999
Q ss_pred EEEEEEceeEeeceeEEEEeeecccccccccccceeccccccccc-CCCCchhhhhhhcCCCCCCeEEEEeccCCCCCCC
Q 013993 162 QDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI-GKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEG 240 (432)
Q Consensus 162 ~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~-~~~~p~~~~l~~qg~i~~~~fs~~l~~~~~~~~~ 240 (432)
+|+|++++..++++.||++....+. |....++||||||++.++. ....+++++|++||+|.+++||+||++... ...
T Consensus 89 ~D~v~~g~~~v~~~~fg~~~~~~~~-f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~-~~~ 166 (325)
T 2apr_A 89 KDNVNLGGLLIKGQTIELAKREAAS-FASGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGKAKN-GGG 166 (325)
T ss_dssp EEEEEETTEEEEEEEEEEEEEECHH-HHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTSCSSSEEEEEECCGGG-TCC
T ss_pred EEEEEECCEEECcEEEEEEeccCcc-cccCCCceEEEeCCcccccccCCCCHHHHHHhcCCCCCceEEEEecCCCC-CCC
Confidence 9999999999999999999876553 5555689999999998764 356789999999999999999999976422 238
Q ss_pred cEEEECccCCCCCccceEEEecC-CCCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHHHHHHHHHHhCCc--
Q 013993 241 GEIVFGGVDPDHYKGEHTYVPVT-KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGAS-- 317 (432)
Q Consensus 241 G~l~fGg~D~s~~~g~l~~~pv~-~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~~~~~i~~~i~a~-- 317 (432)
|+|+|||+|+++|.|+++|+|+. ..+||.|.+++|.|++ .+ +..++.+||||||+++++|++++++|.+++.+.
T Consensus 167 G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~-~~--~~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~ 243 (325)
T 2apr_A 167 GEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGT-ST--VASSFDGILDTGTTLLILPNNIAASVARAYGASDN 243 (325)
T ss_dssp EEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETT-EE--EECCEEEEECTTCSSEEEEHHHHHHHHHHHTCEEC
T ss_pred CEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECC-Ee--cCCCceEEEecCCccEECCHHHHHHHHHHHhcccC
Confidence 99999999999999999999996 4789999999999999 33 456789999999999999999999999998764
Q ss_pred --ceeeecccc-----ccccccceehhhhhhcc
Q 013993 318 --GVISQECKT-----LVDQYGKTILEMLIAET 343 (432)
Q Consensus 318 --g~~~~~C~~-----~v~~yg~~ii~~~~~~~ 343 (432)
+.|..+|.. +.+.|++..+.++.+++
T Consensus 244 ~~g~~~~~C~~~~~p~i~f~f~g~~~~ip~~~~ 276 (325)
T 2apr_A 244 GDGTYTISCDTSAFKPLVFSINGASFQVSPDSL 276 (325)
T ss_dssp SSSCEEECSCGGGCCCEEEEETTEEEEECGGGG
T ss_pred CCCeEEEECCCCCCCcEEEEECCEEEEECHHHE
Confidence 678889984 45577666666666555
No 18
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=2.9e-47 Score=373.70 Aligned_cols=252 Identities=29% Similarity=0.456 Sum_probs=219.7
Q ss_pred ccCCceEEEEEEecCCCcEEEEEeecCCCceeeeCCCCCCCcccccCCcccCCCCCCcee-CCceEEEEeccCe-EEEEE
Q 013993 83 NFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKR-NGTSAAIQYGTGA-ISGFF 160 (432)
Q Consensus 83 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~-~~~~~~~~Y~~gs-~~G~~ 160 (432)
++.+.+|+++|+||||||++.|+|||||+++||++..|. ...|..++.|++++|+||+. .++.|.+.|++|+ ++|.+
T Consensus 11 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~~~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~ 89 (329)
T 3c9x_A 11 DSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETP-KSSATGHAIYTPSKSSTSKKVSGASWSISYGDGSSSSGDV 89 (329)
T ss_dssp STTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCGGGCTTCEECTTCBEEEECTTSCEEEEEE
T ss_pred CCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCC-ccccCCCCcCCcccCcCceEcCCCeEEEEeCCCCcEEEEE
Confidence 456889999999999999999999999999999999996 34567889999999999999 6889999999998 89999
Q ss_pred EEEEEEEceeEeeceeEEEEeeecccccccccccceecccccccccC---CCCchhhhhhhcCCCCCCeEEEEeccCCCC
Q 013993 161 SQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIG---KAIPVWYNMLDQGLVKEPVFSFWLNRDIEG 237 (432)
Q Consensus 161 ~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~---~~~p~~~~l~~qg~i~~~~fs~~l~~~~~~ 237 (432)
++|+|++|+..++++.||++....+..+....++||||||++..+.. ...+++++|+++ |.+++||+||++.
T Consensus 90 ~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~l~~~--- 164 (329)
T 3c9x_A 90 YTDKVTIGGFSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAASS--LAEPLFTADLRHG--- 164 (329)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHHTT--SSSSEEEEECCSS---
T ss_pred EEEEEEECCEEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHHHHHh--cCCCEEEEEecCC---
Confidence 99999999999999999999987653333357899999999987752 457799999987 8899999999874
Q ss_pred CCCcEEEECccCCCCCccceEEEecC-CCCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHHHHHHHHHHh-C
Q 013993 238 EEGGEIVFGGVDPDHYKGEHTYVPVT-KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAI-G 315 (432)
Q Consensus 238 ~~~G~l~fGg~D~s~~~g~l~~~pv~-~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~~~~~i~~~i-~ 315 (432)
.+|+|+|||+|+++|.|+++|+|+. ..+||.|.+++|.|+++.+ +..++.+||||||+++++|++++++|++++ +
T Consensus 165 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~ 241 (329)
T 3c9x_A 165 -QNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKL--NRNSIDGIADTGTTLLLLDDNVVDAYYANVQS 241 (329)
T ss_dssp -SCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCC--CSCCEEEEECTTCCSEEECHHHHHHHHTTCTT
T ss_pred -CCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEec--cCCCceEEEECCCCcEeCCHHHHHHHHHhCCC
Confidence 2899999999999999999999997 5789999999999999865 356789999999999999999999999999 5
Q ss_pred Cc-----ceeeeccc----cccccccceehhhhhhcc
Q 013993 316 AS-----GVISQECK----TLVDQYGKTILEMLIAET 343 (432)
Q Consensus 316 a~-----g~~~~~C~----~~v~~yg~~ii~~~~~~~ 343 (432)
+. +.|..+|. .+.+.|++..+.++.+++
T Consensus 242 a~~~~~~~~~~~~C~~~~P~i~f~f~g~~~~ip~~~~ 278 (329)
T 3c9x_A 242 AQYDNQQEGVVFDCDEDLPSFSFGVGSSTITIPGDLL 278 (329)
T ss_dssp CEEETTTTEEEEETTCCCCCEEEEETTEEEEECGGGG
T ss_pred cEEcCCCCEEEEECCCCCCcEEEEECCEEEEECHHHe
Confidence 53 67888997 356678887777776655
No 19
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=3.7e-47 Score=372.94 Aligned_cols=250 Identities=32% Similarity=0.483 Sum_probs=217.3
Q ss_pred cCCceEEEEEEecCCCcEEEEEeecCCCceeeeCCCCCCCcccccCCcccCCCCCCcee-CCceEEEEeccCe-EEEEEE
Q 013993 84 FMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKR-NGTSAAIQYGTGA-ISGFFS 161 (432)
Q Consensus 84 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~-~~~~~~~~Y~~gs-~~G~~~ 161 (432)
+.+.+|+++|+||||||++.|+|||||+++||++..|. ...| .++.|++++|+||+. .++.|.+.|++|+ ++|.++
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~-~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~~ 89 (329)
T 1oew_A 12 SLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETT-ASEV-XQTIYTPSKSTTAKLLSGATWSISYGDGSSSSGDVY 89 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-GGGC--CCCBCGGGCTTCEEEEEEEEEEECTTSCEEEEEEE
T ss_pred CCCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCC-cccc-ccCccCCccCccceecCCCeEEEEeCCCCcEEEEEE
Confidence 35789999999999999999999999999999999996 3456 788999999999998 6889999999998 799999
Q ss_pred EEEEEEceeEeeceeEEEEeeecccccccccccceecccccccccC---CCCchhhhhhhcCCCCCCeEEEEeccCCCCC
Q 013993 162 QDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIG---KAIPVWYNMLDQGLVKEPVFSFWLNRDIEGE 238 (432)
Q Consensus 162 ~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~---~~~p~~~~l~~qg~i~~~~fs~~l~~~~~~~ 238 (432)
+|+|++|+..+++|.||++....+..+....++||||||++.++.. ...+++++|++| |.+++||+||++.
T Consensus 90 ~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~---- 163 (329)
T 1oew_A 90 TDTVSVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKAS--LDSPVFTADLGYH---- 163 (329)
T ss_dssp EEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHTTT--SSSSEEEEECCSS----
T ss_pred EEEEEECCEEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHHHHh--ccCcEEEEEccCC----
Confidence 9999999999999999999987654333357899999999987753 457899999987 8899999999873
Q ss_pred CCcEEEECccCCCCCccceEEEecC-CCCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHHHHHHHHHHh-CC
Q 013993 239 EGGEIVFGGVDPDHYKGEHTYVPVT-KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAI-GA 316 (432)
Q Consensus 239 ~~G~l~fGg~D~s~~~g~l~~~pv~-~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~~~~~i~~~i-~a 316 (432)
..|+|+|||+|+++|.|+++|+|+. +.+||.|.+++|.|+++.+. ..++.+||||||+++++|++++++|++++ ++
T Consensus 164 ~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a 241 (329)
T 1oew_A 164 APGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFK--STSIDGIADTGTTLLYLPATVVSAYWAQVSGA 241 (329)
T ss_dssp SCEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCE--EEEEEEEECTTCCSEEECHHHHHHHHTTSTTC
T ss_pred CCeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeecc--CCCceEEEeCCCCCEECCHHHHHHHHHhCCCc
Confidence 2899999999999999999999997 57899999999999997653 35679999999999999999999999999 55
Q ss_pred c-----ceeeecccc----ccccccceehhhhhhcc
Q 013993 317 S-----GVISQECKT----LVDQYGKTILEMLIAET 343 (432)
Q Consensus 317 ~-----g~~~~~C~~----~v~~yg~~ii~~~~~~~ 343 (432)
. +.|..+|.. +.+.||+..+.++.+++
T Consensus 242 ~~~~~~g~~~~~C~~~~P~i~f~fgg~~~~ip~~~~ 277 (329)
T 1oew_A 242 KSSSSVGGYVFPCSATLPSFTFGVGSARIVIPGDYI 277 (329)
T ss_dssp EEETTTTEEEEETTCCCCCEEEEETTEEEEECHHHH
T ss_pred EEcCCCCEEEEECCCCCCcEEEEECCEEEEECHHHe
Confidence 3 678899973 56678888887776655
No 20
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=9e-47 Score=371.78 Aligned_cols=255 Identities=30% Similarity=0.482 Sum_probs=224.3
Q ss_pred ceeeecccCCceEEEEEEecCCCcEEEEEeecCCCceeeeCCC--CCCCcccccCCcccCCCCCCceeCCceEEEEeccC
Q 013993 77 DIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAK--CYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTG 154 (432)
Q Consensus 77 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~--C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~g 154 (432)
..+||.|. +.+|+++|+||||||++.|+|||||+++||++.. |.....|..++.|++++|+||+..++.|.+.|++|
T Consensus 3 i~~~l~~~-~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g 81 (339)
T 3fv3_A 3 ISLSLINE-GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSSGTFTPSSSSSYKNLGAAFTIRYGDG 81 (339)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTTTCCBCGGGCTTCEEEEEEEEEECTTS
T ss_pred eeeEEEcC-CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCCCCcCCCccCcceeeCCceEEEEECCC
Confidence 45788876 5789999999999999999999999999999765 76455899999999999999999999999999999
Q ss_pred -eEEEEEEEEEEEEceeEeeceeEEEEeeecccccccccccceeccccccccc----------CCCCchhhhhhhcCCCC
Q 013993 155 -AISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI----------GKAIPVWYNMLDQGLVK 223 (432)
Q Consensus 155 -s~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~----------~~~~p~~~~l~~qg~i~ 223 (432)
++.|.+++|+|+||+..++++.||++....+ .+||||||++..+. ....+++++|++||+|+
T Consensus 82 s~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~-------~~GilGLg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~ 154 (339)
T 3fv3_A 82 STSQGTWGKDTVTINGVSITGQQIADVTQTSV-------DQGILGIGYTSNEAVYDTSGRQTTPNYDNVPVTLKKQGKIR 154 (339)
T ss_dssp CEEEEEEEEEEEEETTEEEEEEEEEEEEEESS-------SSCEEECSCGGGCCCBCTTSCBCSCCCCCHHHHHHHTTSCS
T ss_pred ceEEEEEEEEEEEECCEEECceEEEEEEecCC-------CceeEEecCccccccccccccccCccCCcHHHHHHHCCCCC
Confidence 5899999999999999999999999987643 48999999998753 22345889999999999
Q ss_pred CCeEEEEeccCCCCCCCcEEEECccCCCCCccceEEEecCCCCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccC
Q 013993 224 EPVFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGP 303 (432)
Q Consensus 224 ~~~fs~~l~~~~~~~~~G~l~fGg~D~s~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP 303 (432)
+++||+||++.. ...|+|+|||+|+++|.|+++|+|+.+..||.|.+++|.|+++.+.. +..++|||||+++++|
T Consensus 155 ~~~fsl~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~---~~~~iiDSGtt~~~lP 229 (339)
T 3fv3_A 155 TNAYSLYLNSPS--AETGTIIFGGVDNAKYSGKLVAEQVTSSQALTISLASVNLKGSSFSF---GDGALLDSGTTLTYFP 229 (339)
T ss_dssp SSEEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEEBCCSSSCEEEEEEEEESSCEEEE---EEEEEECTTBSSEEEC
T ss_pred CceEEEEECCCC--CCCeEEEEeeechHHeecceEEEecccCccEEEEEEEEEECCEeecC---CccEEEeCCCCCEecC
Confidence 999999998763 23899999999999999999999999999999999999999988753 3789999999999999
Q ss_pred HHHHHHHHHHhCCc--------ceeeecccc-----cccccc-ceehhhhhhccC
Q 013993 304 TTIITQINHAIGAS--------GVISQECKT-----LVDQYG-KTILEMLIAETQ 344 (432)
Q Consensus 304 ~~~~~~i~~~i~a~--------g~~~~~C~~-----~v~~yg-~~ii~~~~~~~~ 344 (432)
++++++|++++++. +.|..+|.. +.+.|+ +..+.++.+++.
T Consensus 230 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~p~i~f~f~~g~~~~v~~~~~~ 284 (339)
T 3fv3_A 230 SDFAAQLADKAGARLVQVARDQYLYFIDCNTDTSGTTVFNFGNGAKITVPNTEYV 284 (339)
T ss_dssp HHHHHHHHHHHTCEEEEEETTEEEEEECTTCCCCSEEEEEETTSCEEEEEGGGGE
T ss_pred HHHHHHHHHHcCCEEccccccCceEEEecCCCCCCcEEEEECCCCEEEECHHHhe
Confidence 99999999999864 567889986 556784 677777777663
No 21
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=1.8e-46 Score=368.92 Aligned_cols=254 Identities=28% Similarity=0.475 Sum_probs=222.7
Q ss_pred ceeeecccCCceEEEEEEecCCCcEEEEEeecCCCceeeeCC--CCCC------CcccccCCcccCCCCCCceeCCceEE
Q 013993 77 DIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSA--KCYF------SVSCYFHSKYKSSHSSTYKRNGTSAA 148 (432)
Q Consensus 77 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~--~C~~------~~~C~~~~~y~~~~SsT~~~~~~~~~ 148 (432)
..+||.|. +.+|+++|+||||||++.|+|||||+++||++. .|.. ...|..++.|+|++|+||+..++.|.
T Consensus 3 ~~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (334)
T 1j71_A 3 VPTTLINE-GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLNQDFS 81 (334)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEEEEEE
T ss_pred eeEEEecC-CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCCCceE
Confidence 45788886 789999999999999999999999999999976 6852 24799899999999999999999999
Q ss_pred EEeccCe-EEEEEEEEEEEEceeEeeceeEEEEeeecccccccccccceecccccccccC--CCCchhhhhhhcCCCCCC
Q 013993 149 IQYGTGA-ISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIG--KAIPVWYNMLDQGLVKEP 225 (432)
Q Consensus 149 ~~Y~~gs-~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~--~~~p~~~~l~~qg~i~~~ 225 (432)
+.|++|+ +.|.+++|+|++|+..+++|.||++.... ..+||||||++..+.. ...+++++|++||+|+++
T Consensus 82 i~Yg~Gs~~~G~~~~D~v~~g~~~~~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~ 154 (334)
T 1j71_A 82 IEYGDLTSSQGSFYKDTVGFGGISIKNQQFADVTTTS-------VDQGIMGIGFTADEAGYNLYDNVPVTLKKQGIINKN 154 (334)
T ss_dssp EEBTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-------SSSCEEECSCGGGSSTTCCCCCHHHHHHHTTSCSSS
T ss_pred EEECCCCEEEEEEEEEEEEECCEEEccEEEEEEEecC-------CCccEEEEcCCcccCccccCCcHHHHHHHCCCCCcc
Confidence 9999997 68999999999999999999999998653 4689999999987542 345688999999999999
Q ss_pred eEEEEeccCCCCCCCcEEEECccCCCCCccceEEEecCCCCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHH
Q 013993 226 VFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTT 305 (432)
Q Consensus 226 ~fs~~l~~~~~~~~~G~l~fGg~D~s~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~ 305 (432)
+||+||++.. ...|+|+|||+|+++|.|+++|+|+.+..||.|.+++|.|+++.+.. ++.+|+||||+++++|++
T Consensus 155 ~Fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~---~~~~iiDSGTt~~~lP~~ 229 (334)
T 1j71_A 155 AYSLYLNSED--ASTGKIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINFDGTSVST---NADVVLDSGTTITYFSQS 229 (334)
T ss_dssp EEEEECCCTT--CSEEEEEETEEETTSEEEEEEEEECCCSSSCEEEEEEEEETTEEEEE---EEEEEECTTCSSEEECHH
T ss_pred EEEEEeCCCC--CCCeEEEEeeechHHccCceEEEEccCCCeEEEEEeEEEECCEeccC---CccEEEeCCCCcEecCHH
Confidence 9999998752 33899999999999999999999999989999999999999987753 478999999999999999
Q ss_pred HHHHHHHHhCCc-----ceee-ecccc---ccccc-cceehhhhhhcc
Q 013993 306 IITQINHAIGAS-----GVIS-QECKT---LVDQY-GKTILEMLIAET 343 (432)
Q Consensus 306 ~~~~i~~~i~a~-----g~~~-~~C~~---~v~~y-g~~ii~~~~~~~ 343 (432)
++++|++++++. +.|. .+|.. +.+.| |+..+.++.+++
T Consensus 230 ~~~~l~~~~~~~~~~~~~~~~~~~C~~~p~i~f~f~~g~~~~i~~~~y 277 (334)
T 1j71_A 230 TADKFARIVGATWDSRNEIYRLPSCDLSGDAVFNFDQGVKITVPLSEL 277 (334)
T ss_dssp HHHHHHHHHTCEEETTTTEEECSSSCCCSEEEEEESTTCEEEEEGGGG
T ss_pred HHHHHHHHcCCcccCCCceEEEEcCCCCCceEEEEcCCcEEEECHHHh
Confidence 999999999874 3677 89974 45567 677777777665
No 22
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=2.6e-46 Score=368.95 Aligned_cols=255 Identities=29% Similarity=0.491 Sum_probs=222.6
Q ss_pred CceeeecccCCceEEEEEEecCCCcEEEEEeecCCCceeeeCC--CCCC------CcccccCCcccCCCCCCceeCCceE
Q 013993 76 TDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSA--KCYF------SVSCYFHSKYKSSHSSTYKRNGTSA 147 (432)
Q Consensus 76 ~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~--~C~~------~~~C~~~~~y~~~~SsT~~~~~~~~ 147 (432)
...+||.| .+.+|+++|+||||||++.|+|||||+++||++. .|.. ...|..++.|+|++|+||+..++.|
T Consensus 2 ~v~~~l~~-~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~ 80 (342)
T 2qzx_A 2 PVAVTLHN-EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLNTRF 80 (342)
T ss_dssp CEEEEEEE-CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEEEEE
T ss_pred ceeEEEec-CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCCCcE
Confidence 34578888 5789999999999999999999999999999976 6752 2479889999999999999999999
Q ss_pred EEEeccCe-EEEEEEEEEEEEceeEeeceeEEEEeeecccccccccccceecccccccccC--CCCchhhhhhhcCCCCC
Q 013993 148 AIQYGTGA-ISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIG--KAIPVWYNMLDQGLVKE 224 (432)
Q Consensus 148 ~~~Y~~gs-~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~--~~~p~~~~l~~qg~i~~ 224 (432)
.+.|++|+ +.|.+++|+|++|+..++++.||++.... ..+||||||++..+.. ...+++.+|++||+|++
T Consensus 81 ~i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~ 153 (342)
T 2qzx_A 81 DIKYGDGSYAKGKLYKDTVGIGGVSVRDQLFANVWSTS-------ARKGILGIGFQSGEATEFDYDNLPISLRNQGIIGK 153 (342)
T ss_dssp EEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEEC-------SSSCEEECSCGGGCSSSSCCCCHHHHHHHTTSSSS
T ss_pred EEEeCCCCeEEEEEEEEEEEECCEEecceEEEEEEecC-------CCcCEEEEccccccCCCccCccHHHHHHHCCCcCc
Confidence 99999997 68999999999999999999999998653 4689999999887543 24568899999999999
Q ss_pred CeEEEEeccCCCCCCCcEEEECccCCCCCccceEEEecCCCCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCH
Q 013993 225 PVFSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPT 304 (432)
Q Consensus 225 ~~fs~~l~~~~~~~~~G~l~fGg~D~s~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~ 304 (432)
++||+||++.. ...|+|+|||+|+++|.|+++|+|+.+..||.|.+++|.|+++.+.. +..+||||||+++++|+
T Consensus 154 ~~Fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~---~~~aiiDSGTt~~~lP~ 228 (342)
T 2qzx_A 154 AAYSLYLNSAE--ASTGQIIFGGIDKAKYSGSLVDLPITSEKKLTVGLRSVNVRGRNVDA---NTNVLLDSGTTISYFTR 228 (342)
T ss_dssp SEEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEE---EEEEEECTTCSSEEECH
T ss_pred cEEEEEeCCCC--CCCeEEEECccchhhEecceEEEeccCCceEEEEEeEEEECCEecCC---CcCEEEeCCCCCEEcCH
Confidence 99999998752 33799999999999999999999999989999999999999987653 47899999999999999
Q ss_pred HHHHHHHHHhCCc--------ceeeecccc---ccccc-cceehhhhhhcc
Q 013993 305 TIITQINHAIGAS--------GVISQECKT---LVDQY-GKTILEMLIAET 343 (432)
Q Consensus 305 ~~~~~i~~~i~a~--------g~~~~~C~~---~v~~y-g~~ii~~~~~~~ 343 (432)
+++++|++++++. +.|..+|.. +.+.| |+..+.++.+++
T Consensus 229 ~~~~~l~~~~~~~~~~~~~~~~~~~~~C~~~p~i~f~f~~g~~~~i~~~~~ 279 (342)
T 2qzx_A 229 SIVRNILYAIGAQMKFDSAGNKVYVADCKTSGTIDFQFGNNLKISVPVSEF 279 (342)
T ss_dssp HHHHHHHHHHTCEEEECTTSCEEEEECTTCCCEEEEEETTTEEEEEEGGGG
T ss_pred HHHHHHHHHhCCeeeeccCCCcEEEEECCCCCcEEEEECCCcEEEEcHHHh
Confidence 9999999999873 267889974 45567 677777777665
No 23
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=2.5e-46 Score=368.99 Aligned_cols=255 Identities=29% Similarity=0.482 Sum_probs=222.7
Q ss_pred ceeeecccCCceEEEEEEecCCCcEEEEEeecCCCceeeeCCC--CC------CCcccccCCcccCCCCCCceeCCceEE
Q 013993 77 DIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAK--CY------FSVSCYFHSKYKSSHSSTYKRNGTSAA 148 (432)
Q Consensus 77 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~--C~------~~~~C~~~~~y~~~~SsT~~~~~~~~~ 148 (432)
..+||.+. +.+|+++|+||||||++.|+|||||+++||+++. |. ....|..++.|++++|+||+..++.|.
T Consensus 3 v~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (342)
T 3pvk_A 3 VPVTLHNE-QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLNTPFK 81 (342)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEEEEEE
T ss_pred cceEEecC-CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecCCeEE
Confidence 45778775 7899999999999999999999999999999765 73 235899899999999999999999999
Q ss_pred EEeccCe-EEEEEEEEEEEEceeEeeceeEEEEeeecccccccccccceecccccccccCC-CCchhhhhhhcCCCCCCe
Q 013993 149 IQYGTGA-ISGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGK-AIPVWYNMLDQGLVKEPV 226 (432)
Q Consensus 149 ~~Y~~gs-~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~-~~p~~~~l~~qg~i~~~~ 226 (432)
+.|++|+ +.|.+++|+|+||+..++++.||+++... ..+||||||++..+... ..+++++|++||+|++++
T Consensus 82 i~Yg~gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~L~~qg~i~~~~ 154 (342)
T 3pvk_A 82 IGYGDGSSSQGTLYKDTVGFGGVSIKNQVLADVDSTS-------IDQGILGVGYKTNEAGGSYDNVPVTLKKQGVIAKNA 154 (342)
T ss_dssp EECSSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-------SSSCEEECSCGGGCSSCSSCCHHHHHHHTTSSSSSE
T ss_pred EEecCCCeEEEEEEEEEEEECCEEecceEEEEEEccC-------CCccEEEecCccccccccCCcHHHHHHhcCCCCCce
Confidence 9999997 89999999999999999999999998653 45999999999866433 456889999999999999
Q ss_pred EEEEeccCCCCCCCcEEEECccCCCCCccceEEEecCCCCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHHH
Q 013993 227 FSFWLNRDIEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTI 306 (432)
Q Consensus 227 fs~~l~~~~~~~~~G~l~fGg~D~s~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~~ 306 (432)
||+||++.. ...|+|+|||+|+++|.|+++|+|+.+..||.|.+++|.|+++.+.. .+..+||||||+++++|+++
T Consensus 155 fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~--~~~~~iiDSGtt~~~lP~~~ 230 (342)
T 3pvk_A 155 YSLYLNSPD--AATGQIIFGGVDNAKYSGSLIALPVTSDRELRISLGSVEVSGKTINT--DNVDVLLDSGTTITYLQQDL 230 (342)
T ss_dssp EEEECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEE--EEEEEEECTTCSSEEECHHH
T ss_pred EEEEeCCCC--CCCcEEEECccCccceeeeeEEeecCccceEEEEEeEEEECCEEecC--CCceEEEeCCCCCeecCHHH
Confidence 999998753 23799999999999999999999999989999999999999988753 35789999999999999999
Q ss_pred HHHHHHHhCCc--------ceeeecccc---cccccc-ceehhhhhhcc
Q 013993 307 ITQINHAIGAS--------GVISQECKT---LVDQYG-KTILEMLIAET 343 (432)
Q Consensus 307 ~~~i~~~i~a~--------g~~~~~C~~---~v~~yg-~~ii~~~~~~~ 343 (432)
+++|++++++. +.|..+|.. +.+.|+ +..+.++.+++
T Consensus 231 ~~~i~~~~~~~~~~~~~~~~~~~~~C~~~p~i~f~f~~g~~~~vp~~~~ 279 (342)
T 3pvk_A 231 ADQIIKAFNGKLTQDSNGNSFYEVDCNLSGDVVFNFSKNAKISVPASEF 279 (342)
T ss_dssp HHHHHHHTTCEEEECTTSCEEEEECSCCCSEEEEEESTTCEEEEEGGGG
T ss_pred HHHHHHHcCCeecccCCCceEEEEecCCCCceEEEECCCCEEEEcHHHh
Confidence 99999999874 248899995 456776 56677776665
No 24
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=4.2e-45 Score=357.41 Aligned_cols=250 Identities=29% Similarity=0.429 Sum_probs=217.4
Q ss_pred eeecccCCceEEEEEEecCCCcEEEEEeecCCCceeeeCCCCCCCcccccCCcccCCCCCCceeCCceEEEEeccCe-EE
Q 013993 79 VALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA-IS 157 (432)
Q Consensus 79 ~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~gs-~~ 157 (432)
.|+. .+.+|+++|+|| ||++.|+|||||+++||++..|. ...|..++.|+|++|+ ++..++.|.+.|++|+ ++
T Consensus 9 ~~~~--~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~ 82 (323)
T 1izd_A 9 NPTS--NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTP-SSERSGHDYYTPGSSA-QKIDGATWSISYGDGSSAS 82 (323)
T ss_dssp EECG--GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTCCCBCCCTTC-EEEEEEEEEEECTTSCEEE
T ss_pred eEcC--CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCC-cccccCCCCCCccccC-CccCCCeEEEEcCCCCeEE
Confidence 4543 478999999999 89999999999999999999996 3467788999999999 7777899999999998 79
Q ss_pred EEEEEEEEEEceeEeeceeEEEEeeecccccccccccceeccccccccc---CCCCchhhhhhhcCCCCCCeEEEEeccC
Q 013993 158 GFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI---GKAIPVWYNMLDQGLVKEPVFSFWLNRD 234 (432)
Q Consensus 158 G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~---~~~~p~~~~l~~qg~i~~~~fs~~l~~~ 234 (432)
|.+++|+|++|+..+++|.||+++...+..+....++||||||++.++. ...++++++|++| |.+++||+||++.
T Consensus 83 G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~L~~~ 160 (323)
T 1izd_A 83 GDVYKDKVTVGGVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSS--LSEPIFAVALKHN 160 (323)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEECCTT
T ss_pred EEEEEEEEEECCEEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHHHHh--ccCcEEEEEccCC
Confidence 9999999999999999999999998765333335789999999998775 2567899999987 8899999999874
Q ss_pred CCCCCCcEEEECccCCCCCccceEEEecC-CCCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHHHHHHHHHH
Q 013993 235 IEGEEGGEIVFGGVDPDHYKGEHTYVPVT-KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHA 313 (432)
Q Consensus 235 ~~~~~~G~l~fGg~D~s~~~g~l~~~pv~-~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~~~~~i~~~ 313 (432)
.+|+|+|||+|+++|+|+++|+|+. +.+||.|.+++|.|++ .+ +..++.+|+||||+++++|++++++|+++
T Consensus 161 ----~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~--~~~~~~aiiDSGTs~~~lp~~~~~~i~~~ 233 (323)
T 1izd_A 161 ----APGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DS--SSDSITGIADTGTTLLLLDDSIVDAYYEQ 233 (323)
T ss_dssp ----SCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EE--ECCCEEEEECTTCCSEEECHHHHHHHHTT
T ss_pred ----CCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-cc--cCCCceEEEeCCCcceeCCHHHHHHHHHh
Confidence 2899999999999999999999996 6789999999999999 43 46688999999999999999999999999
Q ss_pred h-CCc-----ceeeecccc----ccccccceehhhhhhcc
Q 013993 314 I-GAS-----GVISQECKT----LVDQYGKTILEMLIAET 343 (432)
Q Consensus 314 i-~a~-----g~~~~~C~~----~v~~yg~~ii~~~~~~~ 343 (432)
+ ++. |.|..+|.+ +.+.||+..+.++.+++
T Consensus 234 i~ga~~~~~~g~~~~~C~~~~P~i~f~fgg~~~~i~~~~~ 273 (323)
T 1izd_A 234 VNGASYDSSQGGYVFPSSASLPDFSVTIGDYTATVPGEYI 273 (323)
T ss_dssp STTCEEETTTTEEEEETTCCCCCEEEEETTEEEEECHHHH
T ss_pred CCCcEEcCcCCEEEEECCCCCceEEEEECCEEEecCHHHe
Confidence 9 453 678889973 56688888887776655
No 25
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=5.2e-45 Score=357.07 Aligned_cols=247 Identities=31% Similarity=0.457 Sum_probs=216.2
Q ss_pred CCceEEEEEEecCCCcEEEEEeecCCCceeeeCCCCCCCcccccCCcccCCCCCCceeCCceEEEEeccCe-EEEEEEEE
Q 013993 85 MDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA-ISGFFSQD 163 (432)
Q Consensus 85 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~gs-~~G~~~~D 163 (432)
.+.+|+++|+|| ||++.|+|||||+++||++..|. ...|..++.|++++|+ ++..++.|.+.|++|+ +.|.+++|
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 87 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELP-SSEQTGHDLYTPSSSA-TKLSGYSWDISYGDGSSASGDVYRD 87 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSC-HHHHTTSCCCBCCSSC-EECTTCBEEEECSSSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCC-ccccCCCCCCCchhcC-CccCCCEEEEEeCCCCEEEEEEEEe
Confidence 478999999999 89999999999999999999996 3467788999999999 7767899999999998 89999999
Q ss_pred EEEEceeEeeceeEEEEeeecccccccccccceeccccccccc---CCCCchhhhhhhcCCCCCCeEEEEeccCCCCCCC
Q 013993 164 NVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI---GKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEG 240 (432)
Q Consensus 164 ~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~---~~~~p~~~~l~~qg~i~~~~fs~~l~~~~~~~~~ 240 (432)
+|++|+..+++|.||++....+..+....++||||||++.++. ...+|++++|++| |.+++||+||++. .+
T Consensus 88 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~l~~~----~~ 161 (325)
T 1ibq_A 88 TVTVGGVTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKSQ--LDSPLFAVQLKHD----AP 161 (325)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEEEETT----EE
T ss_pred EEEECCEEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHHHHh--cCCcEEEEEecCC----CC
Confidence 9999999999999999998765433335789999999998775 2567899999987 8899999999874 27
Q ss_pred cEEEECccCCCCCccceEEEecC-CCCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHHHHHHHHHHh-CCc-
Q 013993 241 GEIVFGGVDPDHYKGEHTYVPVT-KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAI-GAS- 317 (432)
Q Consensus 241 G~l~fGg~D~s~~~g~l~~~pv~-~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~~~~~i~~~i-~a~- 317 (432)
|+|+|||+|+++|.|+++|+|+. +.+||.|.+++|.|+++.+ +..++.+|+||||+++++|++++++|++++ ++.
T Consensus 162 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~~ 239 (325)
T 1ibq_A 162 GVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSS--SSSGFSAIADTGTTLILLDDEIVSAYYEQVSGAQE 239 (325)
T ss_dssp EEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCC--BSCCEEEEECTTCCSEEECHHHHHHHHTTSTTCBC
T ss_pred ceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeec--cCCCceEEEeCCCCcEeCCHHHHHHHHHhCCCceE
Confidence 99999999999999999999997 5789999999999999865 356789999999999999999999999999 553
Q ss_pred ----ceeeeccc----cccccccceehhhhhhcc
Q 013993 318 ----GVISQECK----TLVDQYGKTILEMLIAET 343 (432)
Q Consensus 318 ----g~~~~~C~----~~v~~yg~~ii~~~~~~~ 343 (432)
+.|..+|. .+.+.||+..+.++.+++
T Consensus 240 ~~~~g~~~~~C~~~~P~i~f~fgg~~~~i~~~~~ 273 (325)
T 1ibq_A 240 SYEAGGYVFSCSTDLPDFTVVIGDYKAVVPGKYI 273 (325)
T ss_dssp CSSSSSCEEETTCCCCCEEEEETTEEEEECHHHH
T ss_pred cCcCCeEEEEcCCCCCcEEEEECCEEEEECHHHh
Confidence 66788997 356678888887776655
No 26
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=2e-45 Score=375.85 Aligned_cols=242 Identities=27% Similarity=0.416 Sum_probs=204.4
Q ss_pred eeecccCCceEEEEEEecCCCcEEEEEeecCCCceeeeCCCCCCCcccccCCcccCCCCCCceeCCceEEEEeccCeEEE
Q 013993 79 VALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISG 158 (432)
Q Consensus 79 ~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~gs~~G 158 (432)
.+|.+..+.+|+++|+||||||+|.|+|||||+++||++..| |..++.|++++|+||+..++.|.+.|++|++.|
T Consensus 66 ~~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c-----c~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G 140 (455)
T 3lpj_A 66 DNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEG 140 (455)
T ss_dssp TCEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEE
T ss_pred ccccCCCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc-----cccCCcccCCCCCCcccCCccEEEEeCCeEEEE
Confidence 345556678999999999999999999999999999999877 667899999999999999999999999999999
Q ss_pred EEEEEEEEEce-eEee-ceeEEEEeeecccccccccccceecccccccccC--CCCchhhhhhhcCCCCCCeEEEEeccC
Q 013993 159 FFSQDNVKVGD-LVVK-NQDFIEATKEASITFLAAKFDGILGLGFQEISIG--KAIPVWYNMLDQGLVKEPVFSFWLNRD 234 (432)
Q Consensus 159 ~~~~D~v~ig~-~~~~-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~--~~~p~~~~l~~qg~i~~~~fs~~l~~~ 234 (432)
.+++|+|+|++ ..+. .+.|+++............++||||||++.++.. ...|++++|++|+.|+ ++||+||++.
T Consensus 141 ~~~~Dtv~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~L~~~ 219 (455)
T 3lpj_A 141 ELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGA 219 (455)
T ss_dssp EEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCC
T ss_pred EEEEEEEEECCCcceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHccCCC-ceeEEEeccc
Confidence 99999999984 3332 3567777655433223457899999999988764 3688999999999997 9999999864
Q ss_pred CC--------CCCCcEEEECccCCCCCccceEEEecCCCCcceEEeceEEECCeeeeecC---CCceEEEcCCCcCcccC
Q 013993 235 IE--------GEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCS---TGCNAIADSGTSLLAGP 303 (432)
Q Consensus 235 ~~--------~~~~G~l~fGg~D~s~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~---~~~~aiiDTGts~~~lP 303 (432)
.. ...+|+|+|||+|+++|.|+++|+|+.+..||.|.+++|.|+++.+.+.. ..+.+||||||+++++|
T Consensus 220 ~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP 299 (455)
T 3lpj_A 220 GFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLP 299 (455)
T ss_dssp SSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTSSSEEEE
T ss_pred cccccccccccCCCceEEECCcCcccccCceEEEecCCCceeEEEEeEEEECCEEccccccccCCCeEEEECCCcceeCC
Confidence 10 23489999999999999999999999999999999999999999876422 25689999999999999
Q ss_pred HHHHHHHHHHhCCc--------c---eeeecccc
Q 013993 304 TTIITQINHAIGAS--------G---VISQECKT 326 (432)
Q Consensus 304 ~~~~~~i~~~i~a~--------g---~~~~~C~~ 326 (432)
.+++++|+++|++. + .+..+|..
T Consensus 300 ~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~ 333 (455)
T 3lpj_A 300 KKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQ 333 (455)
T ss_dssp HHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEES
T ss_pred HHHHHHHHHHhhhhccccccCcccccCcceeccc
Confidence 99999999999764 1 12578975
No 27
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=4.2e-45 Score=357.43 Aligned_cols=245 Identities=28% Similarity=0.446 Sum_probs=214.2
Q ss_pred CCceEEEEEEecCCCcEEEEEeecCCCceeeeCCCCCCCcccccCCcccCCCCCCceeCCceEEEEeccCe-EEEEEEEE
Q 013993 85 MDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA-ISGFFSQD 163 (432)
Q Consensus 85 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~gs-~~G~~~~D 163 (432)
.+.+|+++|+|| ||++.|+|||||+++||++..|. ...|..++.|+|++|+ ++..++.|.+.|++|+ ++|.+++|
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 88 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELP-ASQQSGHSVYNPSATG-KELSGYTWSISYGDGSSASGNVFTD 88 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCHHHHC-EEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-chhccCCCCCCcccCC-cccCCCeEEEEeCCCCeEEEEEEEE
Confidence 478999999999 89999999999999999999996 3467788999999999 7777899999999998 89999999
Q ss_pred EEEEceeEeeceeEEEEeeecccccccccccceecccccccccC---CCCchhhhhhhcCCCCCCeEEEEeccCCCCCCC
Q 013993 164 NVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIG---KAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEG 240 (432)
Q Consensus 164 ~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~---~~~p~~~~l~~qg~i~~~~fs~~l~~~~~~~~~ 240 (432)
+|++|+..+++|.||+++...+..+....++||||||++.++.. ..++++++|++| |.+++||+||++. .+
T Consensus 89 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~----~~ 162 (323)
T 1bxo_A 89 SVTVGGVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSS--LAQPLFAVALKHQ----QP 162 (323)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGGG--BSSSEEEEECCSS----SC
T ss_pred EEEECCEEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHHHHh--cCCcEEEEEEeCC----CC
Confidence 99999999999999999987653333357899999999987753 467899999987 8999999999874 28
Q ss_pred cEEEECccCCCCCccceEEEecC-CCCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHHHHHHHHHHh-CCc-
Q 013993 241 GEIVFGGVDPDHYKGEHTYVPVT-KKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAI-GAS- 317 (432)
Q Consensus 241 G~l~fGg~D~s~~~g~l~~~pv~-~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~~~~~i~~~i-~a~- 317 (432)
|+|+|||+|+++|+|+++|+|+. +.+||.|.+++|.|++ + +..++.+||||||+++++|++++++|++++ ++.
T Consensus 163 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~--~--~~~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~~ 238 (323)
T 1bxo_A 163 GVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS--Q--SGDGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQQ 238 (323)
T ss_dssp EEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT--E--EEEEEEEEECTTCSSEEECHHHHHHHHTTSTTCEE
T ss_pred ceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC--c--cCCCceEEEeCCCCceeCCHHHHHHHHHhCCCceE
Confidence 99999999999999999999996 6789999999999999 2 345789999999999999999999999999 553
Q ss_pred ----ceeeecccc----ccccccceehhhhhhcc
Q 013993 318 ----GVISQECKT----LVDQYGKTILEMLIAET 343 (432)
Q Consensus 318 ----g~~~~~C~~----~v~~yg~~ii~~~~~~~ 343 (432)
|.|..+|.. +.+.||+..+.++.+++
T Consensus 239 ~~~~g~~~~~C~~~~P~i~f~fgg~~~~l~~~~~ 272 (323)
T 1bxo_A 239 DSNAGGYVFDCSTNLPDFSVSISGYTATVPGSLI 272 (323)
T ss_dssp ETTTTEEEECTTCCCCCEEEEETTEEEEECHHHH
T ss_pred cCcCCEEEEECCCCCceEEEEECCEEEEECHHHe
Confidence 678899973 56688888887776665
No 28
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=6.6e-44 Score=351.46 Aligned_cols=245 Identities=26% Similarity=0.493 Sum_probs=210.9
Q ss_pred ceeeecccCCceEEEEEEecCCCcEEEEEeecCCCceeeeCCCCCCCcccccCCcccCCCCCCceeCCceEEEEeccCeE
Q 013993 77 DIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAI 156 (432)
Q Consensus 77 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~gs~ 156 (432)
..+||.|+ +.+|+++|+||||||++.|+|||||+++||++. +.|++++|++ ..++.|.+.|++|++
T Consensus 3 ~~~~l~n~-~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-----------~~y~~s~Ss~--~~~~~~~i~Yg~Gs~ 68 (340)
T 1wkr_A 3 GSVPATNQ-LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-----------KSYVKTSTSS--ATSDKVSVTYGSGSF 68 (340)
T ss_dssp EEEEEEEC-SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS-----------SCCCCCTTCE--EEEEEEEEECSSCEE
T ss_pred ccEeeecc-CcEEEEEEEECCCCcEEEEEEeCCChhheecCC-----------CccCCcCCcc--ccCceEEEEECCcEE
Confidence 45899997 679999999999999999999999999999742 5789888774 456899999999999
Q ss_pred EEEEEEEEEEEceeEeeceeEEEEeeecccccccccccceeccccccccc--------CCCCchhhhhhhcCCCCCCeEE
Q 013993 157 SGFFSQDNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISI--------GKAIPVWYNMLDQGLVKEPVFS 228 (432)
Q Consensus 157 ~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~--------~~~~p~~~~l~~qg~i~~~~fs 228 (432)
+|.+++|+|+||+..+++|.||+++...+ + ..++||||||++.++. ...++++++|++||+|++++||
T Consensus 69 ~G~~~~Dtv~~g~~~v~~~~fg~~~~~~~--~--~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS 144 (340)
T 1wkr_A 69 SGTEYTDTVTLGSLTIPKQSIGVASRDSG--F--DGVDGILGVGPVDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLA 144 (340)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEES--C--TTCSEEEECSCGGGGTTSEESCTTCCCCCHHHHHHHTTSSSSSEEE
T ss_pred EEEEEEEEEEECCEEEcceEEEEEEccCC--C--cCCCcEEECCccccccccccccccccCCCHHHHHHHcCCCCCCEEE
Confidence 99999999999999999999999998654 3 3579999999998775 3457899999999999999999
Q ss_pred EEeccCC-CCCCCcEEEECccCCCCCccceEEEecCC----CCcceEEeceEEECC-eeeeecCCCceEEEcCCCcCccc
Q 013993 229 FWLNRDI-EGEEGGEIVFGGVDPDHYKGEHTYVPVTK----KGYWQFEMGDVLIDG-ETTGYCSTGCNAIADSGTSLLAG 302 (432)
Q Consensus 229 ~~l~~~~-~~~~~G~l~fGg~D~s~~~g~l~~~pv~~----~~~w~v~l~~i~v~~-~~~~~~~~~~~aiiDTGts~~~l 302 (432)
+||++.. .....|+|+|||+|+++|.|+++|+|+.+ ..||.|. ++|.|++ +.+. .++.+||||||+++++
T Consensus 145 ~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~~~l~---~~~~aiiDSGTt~~~l 220 (340)
T 1wkr_A 145 VSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSSTSIL---SSTAGIVDTGTTLTLI 220 (340)
T ss_dssp EECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTTEEEE---EEEEEEECTTBCSEEE
T ss_pred EEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCCeEcc---CCCeEEEeCCcccccC
Confidence 9998742 12347999999999999999999999987 7899999 9999998 6653 2468999999999999
Q ss_pred CHHHHHHHHHHhCCc-----ceeeeccc------cccccccceehhhhhhcc
Q 013993 303 PTTIITQINHAIGAS-----GVISQECK------TLVDQYGKTILEMLIAET 343 (432)
Q Consensus 303 P~~~~~~i~~~i~a~-----g~~~~~C~------~~v~~yg~~ii~~~~~~~ 343 (432)
|.+++++|.+++++. |.|..+|. .+.+.|++..+.+...++
T Consensus 221 P~~~~~~l~~~~~a~~~~~~g~~~~~C~~~~~~p~i~f~f~g~~~~i~~~~y 272 (340)
T 1wkr_A 221 ASDAFAKYKKATGAVADNNTGLLRLTTAQYANLQSLFFTIGGQTFELTANAQ 272 (340)
T ss_dssp CHHHHHHHHHHHTCEECTTTSSEEECHHHHHTCCCEEEEETTEEEEECTGGG
T ss_pred CHHHHHHHHHhhCCEEcCCCCeEEeeccccccCCcEEEEECCEEEEEcHHHh
Confidence 999999999999874 67889997 356678888777655554
No 29
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=6.4e-44 Score=359.39 Aligned_cols=240 Identities=27% Similarity=0.433 Sum_probs=199.7
Q ss_pred ecccCCceEEEEEEecCCCcEEEEEeecCCCceeeeCCCCCCCcccccCCcccCCCCCCceeCCceEEEEeccCeEEEEE
Q 013993 81 LNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGFF 160 (432)
Q Consensus 81 l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~gs~~G~~ 160 (432)
|.+..+.+|+++|+||||||+|.|+|||||+++||++..| |..++.|++++|+||+..++.|.+.|++|++.|.+
T Consensus 22 l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c-----~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~ 96 (402)
T 3vf3_A 22 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGEL 96 (402)
T ss_dssp EEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEEEE
T ss_pred ccCCCCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC-----CcccCCcCcccCcccccCCCEEEEEECcEEEEEEE
Confidence 3344467999999999999999999999999999999887 66789999999999999999999999999999999
Q ss_pred EEEEEEEc-eeEeece-eEEEEeeecccccccccccceecccccccccCC--CCchhhhhhhcCCCCCCeEEEEeccCC-
Q 013993 161 SQDNVKVG-DLVVKNQ-DFIEATKEASITFLAAKFDGILGLGFQEISIGK--AIPVWYNMLDQGLVKEPVFSFWLNRDI- 235 (432)
Q Consensus 161 ~~D~v~ig-~~~~~~~-~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~--~~p~~~~l~~qg~i~~~~fs~~l~~~~- 235 (432)
++|+|+|+ +..+..+ .|+++....+.......++||||||++.++... .++++++|++|+.|+ ++||+||++..
T Consensus 97 ~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~l~~~~~ 175 (402)
T 3vf3_A 97 GTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAGF 175 (402)
T ss_dssp EEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCC-
T ss_pred EEEEEEECCccccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHHccCCc-cceEEEeecccc
Confidence 99999998 4444433 466665544322234578999999999887643 688999999999997 99999997531
Q ss_pred ----C---CCCCcEEEECccCCCCCccceEEEecCCCCcceEEeceEEECCeeeeecC---CCceEEEcCCCcCcccCHH
Q 013993 236 ----E---GEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCS---TGCNAIADSGTSLLAGPTT 305 (432)
Q Consensus 236 ----~---~~~~G~l~fGg~D~s~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~---~~~~aiiDTGts~~~lP~~ 305 (432)
. ...+|+|+|||+|+++|.|+++|+|+.+..||.|.+++|.|+++.+.+.. ....+||||||+++++|.+
T Consensus 176 ~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~ 255 (402)
T 3vf3_A 176 PLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKK 255 (402)
T ss_dssp ------------EEEEESSCCGGGEEEEEEEEECSSBTTBEECEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEHH
T ss_pred cccccccccCCCCEEEeCCcCcccccCceEEEeCCcCcEEEEEEeEEEECCEEecccccccCCCeEEEECCCCcccCCHH
Confidence 0 23479999999999999999999999999999999999999998876422 2568999999999999999
Q ss_pred HHHHHHHHhCCc--------ce---eeecccc
Q 013993 306 IITQINHAIGAS--------GV---ISQECKT 326 (432)
Q Consensus 306 ~~~~i~~~i~a~--------g~---~~~~C~~ 326 (432)
++++|++++++. +. +..+|..
T Consensus 256 ~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~ 287 (402)
T 3vf3_A 256 VFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQ 287 (402)
T ss_dssp HHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEE
T ss_pred HHHHHHHHHhhhccccccCccccccccccccc
Confidence 999999999754 12 2578974
No 30
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=2e-43 Score=353.53 Aligned_cols=232 Identities=27% Similarity=0.480 Sum_probs=195.8
Q ss_pred eecccCCceEEEEEEecCCCcEEEEEeecCCCceeeeCCCCCCCcccccCCcccCCCCCCceeCCceEEEEeccCeEEEE
Q 013993 80 ALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISGF 159 (432)
Q Consensus 80 ~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~gs~~G~ 159 (432)
+|++..+.+|+++|+||||||+|.|+|||||+++||++..|. .| ++.|++++|+||+..++.|.+.|++|+++|.
T Consensus 6 ~l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~---~~--~~~f~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 80 (383)
T 2ewy_A 6 NLQGDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHS---YI--DTYFDTERSSTYRSKGFDVTVKYTQGSWTGF 80 (383)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBT---TB--SCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred eccCCCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCC---cc--ccCcccccCccceeCCceEEEEECCcEEEEE
Confidence 677777889999999999999999999999999999998884 34 6889999999999999999999999999999
Q ss_pred EEEEEEEEceeE-ee-ceeEEEEeeecccccccccccceeccccccccc--CCCCchhhhhhhcCCCCCCeEEEEeccC-
Q 013993 160 FSQDNVKVGDLV-VK-NQDFIEATKEASITFLAAKFDGILGLGFQEISI--GKAIPVWYNMLDQGLVKEPVFSFWLNRD- 234 (432)
Q Consensus 160 ~~~D~v~ig~~~-~~-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~--~~~~p~~~~l~~qg~i~~~~fs~~l~~~- 234 (432)
+++|+|+|++.. .. .+.|++.....+.......++||||||++.++. ....|++++|++|+.| +++||+||++.
T Consensus 81 ~~~Dtv~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q~~i-~~~FS~~l~~~~ 159 (383)
T 2ewy_A 81 VGEDLVTIPKGFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQANI-PNVFSMQMCGAG 159 (383)
T ss_dssp EEEEEEEETTTEEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHHTC-CSCEEEEECCC-
T ss_pred EEEEEEEECCCccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHHHccCC-CcceEEEeeccc
Confidence 999999998632 22 355676654433211234679999999998875 4567899999999999 79999999752
Q ss_pred ----CCCCCCcEEEECccCCCCCccceEEEecCCCCcceEEeceEEECCeeeeecCC---CceEEEcCCCcCcccCHHHH
Q 013993 235 ----IEGEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCST---GCNAIADSGTSLLAGPTTII 307 (432)
Q Consensus 235 ----~~~~~~G~l~fGg~D~s~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~---~~~aiiDTGts~~~lP~~~~ 307 (432)
.....+|+|+|||+|+++|.|+++|+|+.+..||.|.+++|.|+++.+.+... ...+||||||+++++|++++
T Consensus 160 ~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~ 239 (383)
T 2ewy_A 160 LPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQSLNLDCREYNADKAIVDSGTTLLRLPQKVF 239 (383)
T ss_dssp --------CCEEEEETSCCGGGCCSCEEEEECSSBTTBBCCEEEEEETTEECCCCTTTTTSSCEEECTTCSSEEEEHHHH
T ss_pred cccccCCCCCeEEEeCccchhhccCccEEEecCCCceEEEEEEEEEECCEEccccccccCCccEEEEcCCccccCCHHHH
Confidence 12234899999999999999999999999999999999999999988754322 46899999999999999999
Q ss_pred HHHHHHhCCc
Q 013993 308 TQINHAIGAS 317 (432)
Q Consensus 308 ~~i~~~i~a~ 317 (432)
++|++++++.
T Consensus 240 ~~l~~~i~~~ 249 (383)
T 2ewy_A 240 DAVVEAVARA 249 (383)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHhhh
Confidence 9999999753
No 31
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=1.5e-42 Score=348.59 Aligned_cols=231 Identities=28% Similarity=0.434 Sum_probs=195.8
Q ss_pred eeecccCCceEEEEEEecCCCcEEEEEeecCCCceeeeCCCCCCCcccccCCcccCCCCCCceeCCceEEEEeccCeEEE
Q 013993 79 VALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGAISG 158 (432)
Q Consensus 79 ~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~gs~~G 158 (432)
-+|++..+.+|+++|+||||||+|.|+|||||+++||++..|. . .|+.|++++|+||+..++.|.+.|++|+++|
T Consensus 13 ~~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~---~--~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G 87 (395)
T 2qp8_A 13 DNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHP---F--LHRYYQRQLSSTYRDLRKGVYVPYTQGKWEG 87 (395)
T ss_dssp TCEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCT---T--CSCCCCGGGCTTCEEEEEEEEEECSSCEEEE
T ss_pred eecCCCCCceEEEEEEecCCCceEEEEEecCCCceEEECCCCc---c--ccCCcCcccCCCceeCCceEEEEECCcEEEE
Confidence 3566666889999999999999999999999999999998884 2 3689999999999999999999999999999
Q ss_pred EEEEEEEEEc-eeEee-ceeEEEEeeecccccc-cccccceecccccccccC--CCCchhhhhhhcCCCCCCeEEEEecc
Q 013993 159 FFSQDNVKVG-DLVVK-NQDFIEATKEASITFL-AAKFDGILGLGFQEISIG--KAIPVWYNMLDQGLVKEPVFSFWLNR 233 (432)
Q Consensus 159 ~~~~D~v~ig-~~~~~-~~~fg~~~~~~~~~~~-~~~~~GilGLg~~~~s~~--~~~p~~~~l~~qg~i~~~~fs~~l~~ 233 (432)
.+++|+|+++ +..++ .+.|++.....+. |. ...++||||||++.++.. ...|++++|++|+.|+ ++||+||++
T Consensus 88 ~~~~Dtv~ig~g~~~~~~~~~~~~~~~~~~-f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~q~~i~-~~FS~~L~~ 165 (395)
T 2qp8_A 88 ELGTDLVSIPHGPNVTVRANIAAITESDKF-FINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCG 165 (395)
T ss_dssp EEEEEEEECTTSCSCEEEEEEEEEEEEESC-SCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECC
T ss_pred EEEeEEEEECCCCCceEEEEEEEEEccCcc-cccccCccceEEcCchhhccCCCCCCCHHHHHHHccCCc-ceEEEEecc
Confidence 9999999998 55444 2556766543322 32 356799999999988753 4678999999999997 899999986
Q ss_pred CCC--------CCCCcEEEECccCCCCCccceEEEecCCCCcceEEeceEEECCeeeeecC---CCceEEEcCCCcCccc
Q 013993 234 DIE--------GEEGGEIVFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCS---TGCNAIADSGTSLLAG 302 (432)
Q Consensus 234 ~~~--------~~~~G~l~fGg~D~s~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~---~~~~aiiDTGts~~~l 302 (432)
..- ...+|+|+|||+|+++|.|+++|+|+.+..||.|.|++|.|+++.+.+.. ....+||||||+++++
T Consensus 166 ~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~l 245 (395)
T 2qp8_A 166 AGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRL 245 (395)
T ss_dssp CSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEE
T ss_pred ccccccccccccCCCcEEEECCcCcccccCceEEeccCCCceEEEEEEEEEECCEEcccCccccCCceEEEEcCCCcEec
Confidence 410 12479999999999999999999999999999999999999998875422 2468999999999999
Q ss_pred CHHHHHHHHHHhCC
Q 013993 303 PTTIITQINHAIGA 316 (432)
Q Consensus 303 P~~~~~~i~~~i~a 316 (432)
|++++++|++++++
T Consensus 246 P~~~~~~l~~~i~~ 259 (395)
T 2qp8_A 246 PKKVFEAAVKSIKA 259 (395)
T ss_dssp EHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhh
Confidence 99999999999975
No 32
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=9.8e-41 Score=336.11 Aligned_cols=255 Identities=15% Similarity=0.208 Sum_probs=202.5
Q ss_pred ceeeec-ccCCceEEEEEEecCCCcEEEEEeecCCCceeeeCC-----------CCCCCcccccCCcc------cCCCCC
Q 013993 77 DIVALN-NFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSA-----------KCYFSVSCYFHSKY------KSSHSS 138 (432)
Q Consensus 77 ~~~~l~-~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~-----------~C~~~~~C~~~~~y------~~~~Ss 138 (432)
..+||+ |+.+.+|+++|.||||||+|.|+|||||+++||++. .|. +..|..++.| ++..|+
T Consensus 10 ~~~pl~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~~~Sst~~~~~C~-s~~C~~~~~~~c~~c~~~~~s~ 88 (403)
T 3aup_A 10 VVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCH-STQCSRANTHQCLSCPAASRPG 88 (403)
T ss_dssp EEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSCCCCSSCBCCCTT-BHHHHHTTCCCEEECSSSCBTT
T ss_pred EEEeeecCCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCCCCCCCCCccCCC-CccccCccccCccccCCCCCCC
Confidence 458999 888999999999999999999999999999999999 564 4568878888 555443
Q ss_pred CceeCCceEEEEec-cC-eEEEEEEEEEEEEce-----------eEeeceeEEEEeeecccccccccccceecccccccc
Q 013993 139 TYKRNGTSAAIQYG-TG-AISGFFSQDNVKVGD-----------LVVKNQDFIEATKEASITFLAAKFDGILGLGFQEIS 205 (432)
Q Consensus 139 T~~~~~~~~~~~Y~-~g-s~~G~~~~D~v~ig~-----------~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s 205 (432)
+....+.|.+.|+ +| ++.|.+++|+|+|++ ..+++|.||++.......+....++||||||++.++
T Consensus 89 -~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s 167 (403)
T 3aup_A 89 -CHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPIS 167 (403)
T ss_dssp -BCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEEECSSSTTS
T ss_pred -CCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCCceEEECCCCCcC
Confidence 4456789999998 55 589999999999998 889999999998764322345678999999998765
Q ss_pred cCCCCchhhhhhhcCCCCCCeEEEEeccCCCCCCCcEEEECccCCCCC--c-c-----ceEEEecCCC--CcceEEeceE
Q 013993 206 IGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDHY--K-G-----EHTYVPVTKK--GYWQFEMGDV 275 (432)
Q Consensus 206 ~~~~~p~~~~l~~qg~i~~~~fs~~l~~~~~~~~~G~l~fGg~D~s~~--~-g-----~l~~~pv~~~--~~w~v~l~~i 275 (432)
+..+| +++.+.+++||+||.+.. ..+|+|+||| |+++| . | +++|+|+.+. +||.|.|++|
T Consensus 168 ------~~~ql-~~~~~~~~~FS~~L~~~~--~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l~~i 237 (403)
T 3aup_A 168 ------LPNQL-ASHFGLQRQFTTCLSRYP--TSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSI 237 (403)
T ss_dssp ------HHHHH-HHHHTCCSEEEEECCSCT--TSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEEECEEEE
T ss_pred ------HHHHH-HhhcCCCCeEEEEcCCCC--CCCeeEEECC-CchhccccccccccCceeecccccCCCCcceEEEEEE
Confidence 44555 455677899999998852 2389999999 99988 6 6 9999999765 8999999999
Q ss_pred EECCeee-eecCC--------CceEEEcCCCcCcccCHHHHHHHHHHh----CCc--------ceeeecccc------cc
Q 013993 276 LIDGETT-GYCST--------GCNAIADSGTSLLAGPTTIITQINHAI----GAS--------GVISQECKT------LV 328 (432)
Q Consensus 276 ~v~~~~~-~~~~~--------~~~aiiDTGts~~~lP~~~~~~i~~~i----~a~--------g~~~~~C~~------~v 328 (432)
.|+++.+ .+... ...+||||||+++++|++++++|+++| ++. ..+-.+|+. +.
T Consensus 238 ~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~c~~c~~~~~~P~i~ 317 (403)
T 3aup_A 238 RINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFNSNKINAYPSVD 317 (403)
T ss_dssp EETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSCEECGGGCCCCCCEE
T ss_pred EECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCceEECCCcCcCCcEE
Confidence 9999877 43221 235999999999999999999999999 431 225578874 45
Q ss_pred ccccce---ehhhhhhcc
Q 013993 329 DQYGKT---ILEMLIAET 343 (432)
Q Consensus 329 ~~yg~~---ii~~~~~~~ 343 (432)
+.|++. .+.+...++
T Consensus 318 f~f~g~~~~~~~l~~~~y 335 (403)
T 3aup_A 318 LVMDKPNGPVWRISGEDL 335 (403)
T ss_dssp EEESSTTCCEEEECHHHH
T ss_pred EEEcCCCceEEEEcccce
Confidence 567664 666665554
No 33
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=1.1e-39 Score=328.51 Aligned_cols=230 Identities=17% Similarity=0.199 Sum_probs=188.7
Q ss_pred ceeeecc-cCCceEEEEEEecCCCcEEEEEeecCCCceeeeCCCCCC----------CcccccCCcccCCC-----CCCc
Q 013993 77 DIVALNN-FMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYF----------SVSCYFHSKYKSSH-----SSTY 140 (432)
Q Consensus 77 ~~~~l~~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C~~----------~~~C~~~~~y~~~~-----SsT~ 140 (432)
..+|++. ..+.+|+++|.||||||+|.|+|||||+++||+|..|.. +..|..++.|++.. ++++
T Consensus 9 ~~~pv~~d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c~~Sst~~~v~C~s~~C~~~~~~~~~~c~s~~~~~c 88 (413)
T 3vla_A 9 LVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRPVRCRTSQCSLSGSIACGDCFNGPRPGC 88 (413)
T ss_dssp EEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSSCCCTTCEECBTTSHHHHHTTCCEEECCSSCCBTTB
T ss_pred EEEEeeecCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCCCCCCCcCccCCCcccccccccCCCcccccCCCCCC
Confidence 4466663 457899999999999999999999999999999965421 45687788887643 3455
Q ss_pred eeCCceEEEEec-cCe-EEEEEEEEEEEEc---------eeEeeceeEEEEeeecccccccccccceecccccccccCCC
Q 013993 141 KRNGTSAAIQYG-TGA-ISGFFSQDNVKVG---------DLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKA 209 (432)
Q Consensus 141 ~~~~~~~~~~Y~-~gs-~~G~~~~D~v~ig---------~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~ 209 (432)
....+.|.+.|+ +|+ +.|.+++|+|+|+ +..++++.|||+..+.... ...+++||||||++.++
T Consensus 89 ~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g-~~~~~dGIlGLg~~~lS---- 163 (413)
T 3vla_A 89 NNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQN-LASGVVGMAGLGRTRIA---- 163 (413)
T ss_dssp CSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTT-SCTTCCEEEECSSSSSS----
T ss_pred CCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccC-cccccccccccCCCCcc----
Confidence 666789999995 654 6899999999997 3688999999998753222 23568999999999877
Q ss_pred CchhhhhhhcCCCCCCeEEEEeccCCCCCCCcEEEECccCCCC-----Cccc-eEEEecCCC--------------Ccce
Q 013993 210 IPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPDH-----YKGE-HTYVPVTKK--------------GYWQ 269 (432)
Q Consensus 210 ~p~~~~l~~qg~i~~~~fs~~l~~~~~~~~~G~l~fGg~D~s~-----~~g~-l~~~pv~~~--------------~~w~ 269 (432)
+..+|.+++.+ +++||+||.+.. ..+|+|+|||+|..+ |.|+ ++|+|+.+. .||.
T Consensus 164 --l~sql~~~~~i-~~~FS~cL~~~~--~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~y~ 238 (413)
T 3vla_A 164 --LPSQFASAFSF-KRKFAMCLSGST--SSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYF 238 (413)
T ss_dssp --HHHHHHHHHTC-CSEEEEECCSCS--SSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCSCE
T ss_pred --hHHHHhhhcCC-CceEEEeCCCCC--CCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCceEE
Confidence 66789999888 899999999852 348999999998753 7888 999999764 6999
Q ss_pred EEeceEEECCeeeeecC--------CCceEEEcCCCcCcccCHHHHHHHHHHhCC
Q 013993 270 FEMGDVLIDGETTGYCS--------TGCNAIADSGTSLLAGPTTIITQINHAIGA 316 (432)
Q Consensus 270 v~l~~i~v~~~~~~~~~--------~~~~aiiDTGts~~~lP~~~~~~i~~~i~a 316 (432)
|.|++|.||++.+.+.. +++.+||||||+++++|++++++|.++|++
T Consensus 239 V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~ 293 (413)
T 3vla_A 239 IGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIK 293 (413)
T ss_dssp ECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHH
T ss_pred EEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHH
Confidence 99999999999876432 357899999999999999999999988865
No 34
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=1e-36 Score=304.61 Aligned_cols=221 Identities=12% Similarity=0.147 Sum_probs=175.1
Q ss_pred eeeec-ccCCceEEEEEEecCCCcEEEEEeecCCCceeeeCCCCC-------CCcccccCCcccCCCCCCce-------e
Q 013993 78 IVALN-NFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCY-------FSVSCYFHSKYKSSHSSTYK-------R 142 (432)
Q Consensus 78 ~~~l~-~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C~-------~~~~C~~~~~y~~~~SsT~~-------~ 142 (432)
.+|++ ++.+.+|+++|+|||| |+|||||+++||+|..|. .+..|..++.|++..+ ++. .
T Consensus 4 ~~pv~~~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~~~~~~~C~s~~C~~~~~~~~~sc-~~~~~~~~~~~ 77 (381)
T 1t6e_X 4 LAPVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAPGC-PAPSCGSDKHD 77 (381)
T ss_dssp EEEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTCCCCCCBTTSHHHHHHHSSCCTTC-CCCCC------
T ss_pred EEeEEecCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCCCCCccCCCCchhccccCCCCCCC-CCccCCcCcCC
Confidence 46777 7889999999999997 999999999999985442 1356777777877533 332 1
Q ss_pred CCc-eEEEEeccCeE-EEEEEEEEEEEce----eEeece----eEEEEeeecccccccccccceecccccccccCCCCch
Q 013993 143 NGT-SAAIQYGTGAI-SGFFSQDNVKVGD----LVVKNQ----DFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPV 212 (432)
Q Consensus 143 ~~~-~~~~~Y~~gs~-~G~~~~D~v~ig~----~~~~~~----~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~p~ 212 (432)
..+ .|.+.|++|+. +|.+++|+|++++ ..++++ .||++.......+ ...++||||||++.++ +
T Consensus 78 ~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~-~~~~dGIlGLg~~~~s------~ 150 (381)
T 1t6e_X 78 KPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASL-PRGSTGVAGLANSGLA------L 150 (381)
T ss_dssp CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTS-CTTEEEEEECSSSTTS------H
T ss_pred CccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCC-CCCCceEEEeCCCcch------h
Confidence 223 59999999985 8999999999985 567766 5699876532222 3578999999998776 5
Q ss_pred hhhhhhcCCCCCCeEEEEeccCCCCCCCcEEEECccCCC--CCccceEEEecCCC---CcceEEeceEEECCeeeeecCC
Q 013993 213 WYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGGVDPD--HYKGEHTYVPVTKK---GYWQFEMGDVLIDGETTGYCST 287 (432)
Q Consensus 213 ~~~l~~qg~i~~~~fs~~l~~~~~~~~~G~l~fGg~D~s--~~~g~l~~~pv~~~---~~w~v~l~~i~v~~~~~~~~~~ 287 (432)
..+|.+|++ .+++||+||.+. .+|+|+|||+|.. +|.|+++|+|+.+. .+|.|.|++|.|+++.+.+...
T Consensus 151 ~~ql~~~~~-~~~~FS~~L~~~----~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~~ 225 (381)
T 1t6e_X 151 PAQVASAQK-VANRFLLCLPTG----GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEG 225 (381)
T ss_dssp HHHHHHHHT-CCSEEEEECCSS----SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCCTT
T ss_pred HHHHhhhcc-cCceEEEEeCCC----CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEecCCHH
Confidence 668888885 479999999875 3899999998765 58999999999763 4677999999999988764433
Q ss_pred ---CceEEEcCCCcCcccCHHHHHHHHHHhCC
Q 013993 288 ---GCNAIADSGTSLLAGPTTIITQINHAIGA 316 (432)
Q Consensus 288 ---~~~aiiDTGts~~~lP~~~~~~i~~~i~a 316 (432)
++.+||||||+++++|++++++|.+++++
T Consensus 226 ~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~ 257 (381)
T 1t6e_X 226 ALATGGVMLSTRLPYVLLRPDVYRPLMDAFTK 257 (381)
T ss_dssp CSCTTCEEECSSCSSEEECHHHHHHHHHHHHH
T ss_pred HccCCCEEEECCCccEEeCHHHHHHHHHHHHH
Confidence 45799999999999999999988877753
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=99.96 E-value=3.3e-29 Score=234.57 Aligned_cols=175 Identities=41% Similarity=0.756 Sum_probs=154.1
Q ss_pred ceeEeeceeEEEEeeecccccccccccceecccccccccCCCCchhhhhhhcCCCCCCeEEEEeccCCCCCCCcEEEECc
Q 013993 168 GDLVVKNQDFIEATKEASITFLAAKFDGILGLGFQEISIGKAIPVWYNMLDQGLVKEPVFSFWLNRDIEGEEGGEIVFGG 247 (432)
Q Consensus 168 g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~p~~~~l~~qg~i~~~~fs~~l~~~~~~~~~G~l~fGg 247 (432)
|++++++|.||+++...+..|....++||||||++.++.....|++++|++||+|.+++||+||++......+|+|+|||
T Consensus 1 gg~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg 80 (241)
T 1lya_B 1 GGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGG 80 (241)
T ss_dssp CCEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETS
T ss_pred CCeEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECC
Confidence 57889999999999876655666788999999999988777889999999999999999999999875433489999999
Q ss_pred cCCCCCccceEEEecCCCCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHHHHHHHHHHhCCc----ceeeec
Q 013993 248 VDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGAS----GVISQE 323 (432)
Q Consensus 248 ~D~s~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~~~~~i~~~i~a~----g~~~~~ 323 (432)
+|+++|+|+++|+|+.+.+||.|.+++|.|+++.+. +..++.+|+||||+++++|.+++++|++++++. |.|..+
T Consensus 81 ~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~g~~~~~ 159 (241)
T 1lya_B 81 TDSKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLTL-CKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPLIQGEYMIP 159 (241)
T ss_dssp CCGGGEEEEEEEEECSSBTTBEEEEEEEEETTSCEE-STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEEETTEEEEE
T ss_pred cCHHHcCCceEEEECccccEEEEEEeEEEECCeeEe-ccCCCEEEEECCCccccCCHHHHHHHHHHhCCeeccCCcEEEE
Confidence 999999999999999999999999999999998752 567889999999999999999999999999985 678899
Q ss_pred ccc------ccccccceehhhhhhcc
Q 013993 324 CKT------LVDQYGKTILEMLIAET 343 (432)
Q Consensus 324 C~~------~v~~yg~~ii~~~~~~~ 343 (432)
|.. +.+.|++..+.+..+++
T Consensus 160 C~~~~~~p~i~f~f~g~~~~l~~~~y 185 (241)
T 1lya_B 160 CEKVSTLPAITLKLGGKGYKLSPEDY 185 (241)
T ss_dssp GGGGGGSCCEEEEETTEEEEECTTTS
T ss_pred CCCCccCCeEEEEECCEEEEECHHHh
Confidence 974 56678888888877665
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.93 E-value=1.2e-25 Score=179.29 Aligned_cols=93 Identities=58% Similarity=1.028 Sum_probs=87.0
Q ss_pred ceeeecccCCceEEEEEEecCCCcEEEEEeecCCCceeeeCCCCCC-CcccccCCcccCCCCCCceeCCceEEEEeccCe
Q 013993 77 DIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYF-SVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA 155 (432)
Q Consensus 77 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C~~-~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~gs 155 (432)
..+||.|+.+.+|+++|.||||||+|.|+|||||+++||++..|.. ...|..|+.|+|++|+||+..++.|.+.|++|+
T Consensus 3 ~~~~l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~~~y~p~~SsT~~~~~~~~~i~Yg~Gs 82 (97)
T 1lya_A 3 IPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGS 82 (97)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCE
T ss_pred ceEeeEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCCCCCCCchhCCCceeCCCcEEEEECCcE
Confidence 4589999999999999999999999999999999999999999952 248999999999999999999999999999999
Q ss_pred EEEEEEEEEEEEce
Q 013993 156 ISGFFSQDNVKVGD 169 (432)
Q Consensus 156 ~~G~~~~D~v~ig~ 169 (432)
+.|.+++|+|+|++
T Consensus 83 ~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 83 LSGYLSQDTVSVPC 96 (97)
T ss_dssp EEEEEEEEEEEESC
T ss_pred EEEEEEEEEEEECC
Confidence 99999999999986
No 37
>3rfi_A Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuberosum}
Probab=99.87 E-value=3.6e-24 Score=173.81 Aligned_cols=107 Identities=45% Similarity=0.969 Sum_probs=78.2
Q ss_pred CCcceeeeccccccccccceehhhhhhccCcccccccccccccCCccceecccccccccCCCCCCCCCCCCccchhhHHH
Q 013993 315 GASGVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDGTRGFSMGIESVIDKSSDKSSDGVHDSAMCSACEMA 394 (432)
Q Consensus 315 ~a~g~~~~~C~~~v~~yg~~ii~~~~~~~~p~~ic~~~glC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~ 394 (432)
||+|.++.+|+++|++||+.+|+++.+++.|+.+|.++|+|..++.+.....++.++++++.+++ ..+++.|.+|+|+
T Consensus 2 ~a~g~~~~~C~~~V~~Y~~~ii~~l~~~~~P~~iC~~lglC~~~~~~~~~~~i~~vv~~~~~~~~--~~~~~~C~~Ce~~ 79 (108)
T 3rfi_A 2 SAMAIVSMECKTIVSQYGEMIWDLLVSGVRPDQVCSQAGLCFVDGAQHVSSNIKTVVERETEGSS--VGEAPLCTACEMA 79 (108)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHTTSSCC--------------------------CCHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHcCCcCCCccccccccccccccccccccc--CCCCCcChhHHHH
Confidence 67899999999999999999999999999999999999999988766555566666655421111 1258999999999
Q ss_pred HHHHHHHhhhcccHHHHHHHHHhhcccCC
Q 013993 395 VIWMQNKLRRNETADQILNYVNQLCDRLP 423 (432)
Q Consensus 395 v~~~~~~l~~n~t~~~i~~~l~~~C~~lp 423 (432)
|.|+|++|++|+|+++|+++|+++|++||
T Consensus 80 V~~ie~~L~~N~Te~eI~~~l~k~C~~LP 108 (108)
T 3rfi_A 80 VVWMQNQLKQEGTKEKVLEYVNQLCEKIP 108 (108)
T ss_dssp HHHHHHHHTSHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhcCchHHHHHHHHHHHHhhCc
Confidence 99999999999999999999999999999
No 38
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=98.95 E-value=4.3e-11 Score=89.37 Aligned_cols=43 Identities=14% Similarity=0.156 Sum_probs=39.1
Q ss_pred ccchhhHHHHHHHHHHhhhcccHHHHHHHHHhhcccCCCCCCCC
Q 013993 386 AMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGES 429 (432)
Q Consensus 386 ~~C~~C~~~v~~~~~~l~~n~t~~~i~~~l~~~C~~lp~~~~~~ 429 (432)
..|.+|+++|+++|++| +|+|+++|+++|+++|++||++....
T Consensus 2 ~~C~~C~~~v~~le~~l-~n~Te~~I~~~L~~vC~~l~~~~~~~ 44 (74)
T 1l9l_A 2 RDYRTCLTIVQKLKKMV-DKPTQRSVSNAATRVCRTGRSRWRDV 44 (74)
T ss_dssp HHHHHHHHHHHHHHHHC-SSCCHHHHHHHHHHGGGSSCHHHHHH
T ss_pred CCChHHHHHHHHHHHHh-cccCHHHHHHHHHHHHHhCChHHHHH
Confidence 56999999999999999 99999999999999999999755433
No 39
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=98.81 E-value=8.2e-10 Score=83.45 Aligned_cols=44 Identities=20% Similarity=0.470 Sum_probs=40.4
Q ss_pred CccchhhHHHHHHHHHHhhhcccHHHHHHHHHhhcccCCCCCCCC
Q 013993 385 SAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGES 429 (432)
Q Consensus 385 ~~~C~~C~~~v~~~~~~l~~n~t~~~i~~~l~~~C~~lp~~~~~~ 429 (432)
+..|.+|+++|+++|++|++| |+++|+++|+++|++||++....
T Consensus 2 ~~~C~~C~~vv~~ve~~l~~n-t~~~I~~~l~~~C~~lp~~~~~~ 45 (77)
T 1of9_A 2 EILCNLCTGLINTLENLLTTK-GADKVKDYISSLCNKASGFIATL 45 (77)
T ss_dssp CSSHHHHHHHHHHHHHHCSSS-CSHHHHHHHHHHHTTCSSTTHHH
T ss_pred CCcchhHHHHHHHHHHHHHHC-cHHHHHHHHHHHHHcCChHHHHH
Confidence 567999999999999999999 99999999999999999876543
No 40
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=98.77 E-value=1.9e-09 Score=84.38 Aligned_cols=47 Identities=26% Similarity=0.576 Sum_probs=43.7
Q ss_pred CCccchhhHHHHHHHHHHhhhcccHHHHHHHHHhhcccCCCCCCCCC
Q 013993 384 DSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGESA 430 (432)
Q Consensus 384 ~~~~C~~C~~~v~~~~~~l~~n~t~~~i~~~l~~~C~~lp~~~~~~~ 430 (432)
++..|.+|+++|.+++++|++|+|+++|+++|+++|+.||++..+.|
T Consensus 4 ~~~~C~~C~~vv~~i~~~l~~n~t~~~I~~~l~~~C~~lp~~~~~~C 50 (91)
T 2qyp_A 4 SDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEEC 50 (91)
T ss_dssp CHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHTSCSSTTTTH
T ss_pred CCCcchHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHCCCCcccch
Confidence 47889999999999999999999999999999999999998877665
No 41
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=98.76 E-value=1.7e-09 Score=81.95 Aligned_cols=43 Identities=16% Similarity=0.386 Sum_probs=39.6
Q ss_pred ccchhhHHHHHHHHHHhhhcccHHHHHHHHHhhcccCCCCCCCC
Q 013993 386 AMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGES 429 (432)
Q Consensus 386 ~~C~~C~~~v~~~~~~l~~n~t~~~i~~~l~~~C~~lp~~~~~~ 429 (432)
..|.+|+++|+++|+++++|+|+++|+++|+++|++||+ ....
T Consensus 2 ~~C~~C~~iv~~ve~~l~~~~t~~~I~~~l~~~C~~lp~-~~~~ 44 (78)
T 1nkl_A 2 YFCESCRKIIQKLEDMVGPQPNEDTVTQAASQVCDKLKI-LRGL 44 (78)
T ss_dssp CHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHSCS-THHH
T ss_pred CcchHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhhCch-hHHH
Confidence 569999999999999999999999999999999999997 5443
No 42
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=98.75 E-value=1.8e-09 Score=82.23 Aligned_cols=44 Identities=27% Similarity=0.611 Sum_probs=40.7
Q ss_pred CccchhhHHHHHHHHHHhhhcccHHHHHHHHHhhcccCCCCCCC
Q 013993 385 SAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNGE 428 (432)
Q Consensus 385 ~~~C~~C~~~v~~~~~~l~~n~t~~~i~~~l~~~C~~lp~~~~~ 428 (432)
+..|.+|+++|.+++++|++|+|+++|+++|+++|++||++...
T Consensus 2 ~~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~~~~~ 45 (80)
T 3bqp_A 2 GGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDPYQK 45 (80)
T ss_dssp CTTHHHHHHHHHHHHHHSCTTCCHHHHHHHHHHHGGGSCGGGHH
T ss_pred cCcchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCCCccch
Confidence 56799999999999999999999999999999999999986543
No 43
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=98.71 E-value=6.6e-09 Score=79.76 Aligned_cols=41 Identities=37% Similarity=0.694 Sum_probs=39.6
Q ss_pred CccchhhHHHHHHHHHHhhhcccHHHHHHHHHhhcccCCCC
Q 013993 385 SAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSP 425 (432)
Q Consensus 385 ~~~C~~C~~~v~~~~~~l~~n~t~~~i~~~l~~~C~~lp~~ 425 (432)
+..|.+|+++|.+++++|++|+|+++|+++|+++|++||++
T Consensus 3 ~~~C~~C~~~v~~~~~~l~~n~t~~~I~~~l~~~C~~lp~~ 43 (83)
T 4ddj_A 3 SLPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKP 43 (83)
T ss_dssp CHHHHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHTTSCTT
T ss_pred CCcchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHhCCCc
Confidence 57799999999999999999999999999999999999987
No 44
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=98.69 E-value=2.3e-09 Score=82.35 Aligned_cols=45 Identities=24% Similarity=0.573 Sum_probs=40.3
Q ss_pred CCCccchhhHHHHHHHHHHhhhcccHHHHHHHHHhhcccCCCCCC
Q 013993 383 HDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSPNG 427 (432)
Q Consensus 383 ~~~~~C~~C~~~v~~~~~~l~~n~t~~~i~~~l~~~C~~lp~~~~ 427 (432)
+++..|.+|+++|.+++++|++|+|+++|+++|+++|++||++..
T Consensus 2 ~~~~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~~~~ 46 (83)
T 2gtg_A 2 DSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLS 46 (83)
T ss_dssp --CCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTSSCHHHH
T ss_pred CCCCcChhHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHCCCcch
Confidence 357889999999999999999999999999999999999997443
No 45
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=98.59 E-value=9.2e-09 Score=78.51 Aligned_cols=43 Identities=28% Similarity=0.475 Sum_probs=40.1
Q ss_pred CccchhhHHHHHHHHHHhhhcccH-HHHHHHHHhhcccCCCCCC
Q 013993 385 SAMCSACEMAVIWMQNKLRRNETA-DQILNYVNQLCDRLPSPNG 427 (432)
Q Consensus 385 ~~~C~~C~~~v~~~~~~l~~n~t~-~~i~~~l~~~C~~lp~~~~ 427 (432)
+..|.+|+++|+++|++|++|+|+ ++|+++|+++|++||+...
T Consensus 3 ~~~C~~C~~~V~~ve~~l~~n~t~~~~I~~~l~~~C~~lp~~~~ 46 (81)
T 1n69_A 3 GDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPGMA 46 (81)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHGGGGCTTHH
T ss_pred CCcchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHcCcHHH
Confidence 567999999999999999999999 9999999999999997544
No 46
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=98.55 E-value=5.1e-09 Score=82.64 Aligned_cols=41 Identities=20% Similarity=0.389 Sum_probs=38.6
Q ss_pred CCCccchhhHHHHHHHHHHhhhcccHHHHHHHHHhhcccCCCC
Q 013993 383 HDSAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPSP 425 (432)
Q Consensus 383 ~~~~~C~~C~~~v~~~~~~l~~n~t~~~i~~~l~~~C~~lp~~ 425 (432)
.++..|.+|+++|+++|++| |+|+++|+++|+++|++||.+
T Consensus 19 ~~~~~C~~C~~vV~~ve~~l--n~t~~~I~~~L~~~C~~lp~~ 59 (99)
T 2js9_A 19 RSALSCQMCELVVKKYEGSA--DKDANVIKKDFDAECKKLFHT 59 (99)
T ss_dssp CCSSTHHHHHHHHHHHTTTS--SCCHHHHHHHHHHHHHTGGGG
T ss_pred CCCCcchhHHHHHHHHHHHH--HhhHHHHHHHHHHHHHcCCCc
Confidence 45888999999999999999 999999999999999999976
No 47
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=97.11 E-value=4.8e-05 Score=59.01 Aligned_cols=41 Identities=39% Similarity=0.850 Sum_probs=35.4
Q ss_pred eeeeccccccccccceehhhhhhccCcccccccccccccCC
Q 013993 319 VISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTFDG 359 (432)
Q Consensus 319 ~~~~~C~~~v~~yg~~ii~~~~~~~~p~~ic~~~glC~~~~ 359 (432)
.+..+|+.++++|++.+|+++.+.+.|+.+|..+|+|...+
T Consensus 45 ~~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~~~~ 85 (91)
T 2qyp_A 45 SLSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTR 85 (91)
T ss_dssp STTTTHHHHHHHHHHHHHHHHHHTCCHHHHHHTTTCC----
T ss_pred CcccchHHHHHHHHHHHHHHHHHcCCHHHHHhhcCCCCCcc
Confidence 47899999999999999999999999999999999999764
No 48
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=96.81 E-value=8.8e-05 Score=58.26 Aligned_cols=37 Identities=24% Similarity=0.564 Sum_probs=35.4
Q ss_pred eeeccccccccccceehhhhhhccCcccccccccccc
Q 013993 320 ISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCT 356 (432)
Q Consensus 320 ~~~~C~~~v~~yg~~ii~~~~~~~~p~~ic~~~glC~ 356 (432)
+..+|+.++++|++.+|+++.++..|+.+|..+++|.
T Consensus 63 ~~~~C~~~V~~y~~~II~~L~~~~~P~~VC~~L~lC~ 99 (99)
T 2js9_A 63 GTRECDHYVNSKVDPIIHELEGGTAPKDVCTKLNECP 99 (99)
T ss_dssp HHHHHHTTTTTTHHHHHHHHHHTCCTTHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCCC
Confidence 7889999999999999999999999999999999994
No 49
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=96.77 E-value=0.00011 Score=55.21 Aligned_cols=38 Identities=24% Similarity=0.713 Sum_probs=35.8
Q ss_pred eeeeccccccccccceehhhhhhccCcccccccccccc
Q 013993 319 VISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCT 356 (432)
Q Consensus 319 ~~~~~C~~~v~~yg~~ii~~~~~~~~p~~ic~~~glC~ 356 (432)
.+..+|+.++++||+.+|+++.+++.|+.+|..+|+|.
T Consensus 42 ~~~~~C~~~v~~y~~~ii~~l~~~~~P~~iC~~l~~C~ 79 (80)
T 3bqp_A 42 PYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACP 79 (80)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHTTSSC
T ss_pred ccchhhHHHHHHHHHHHHHHHHHCCCHHHHHhhcCCCC
Confidence 47889999999999999999999899999999999996
No 50
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=96.75 E-value=0.00013 Score=54.79 Aligned_cols=38 Identities=21% Similarity=0.587 Sum_probs=36.0
Q ss_pred eeeeccccccccccceehhhhhhccCcccccccccccc
Q 013993 319 VISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCT 356 (432)
Q Consensus 319 ~~~~~C~~~v~~yg~~ii~~~~~~~~p~~ic~~~glC~ 356 (432)
.|...|+.++++|++.+|+++.++..|+.+|..+|+|.
T Consensus 40 ~~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC~ 77 (78)
T 1nkl_A 40 ILRGLCKKIMRSFLRRISWDILTGKKPQAICVDIKICK 77 (78)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTCSC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHCCCHHHHHhccCCCC
Confidence 38899999999999999999999999999999999996
No 51
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=96.60 E-value=7.4e-05 Score=55.97 Aligned_cols=38 Identities=18% Similarity=0.532 Sum_probs=36.0
Q ss_pred ceeeeccccccccccceehhhhhhccCccccccccccc
Q 013993 318 GVISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLC 355 (432)
Q Consensus 318 g~~~~~C~~~v~~yg~~ii~~~~~~~~p~~ic~~~glC 355 (432)
+.++..|+.++++|++.+|+++.++..|+.+|..+|+|
T Consensus 40 ~~~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC 77 (77)
T 1of9_A 40 GFIATLCTKVLDFGIDKLIQLIEDKVDANAICAKIHAC 77 (77)
T ss_dssp STTHHHHHHHHHHCHHHHHHHHHHTCCHHHHHHHHSCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCC
Confidence 56888999999999999999999999999999999998
No 52
>3s64_A AC-SLP-1, saposin-like protein 1; lipid-binding, lipid binding protein; HET: CIT EPE; 2.30A {Ancylostoma caninum}
Probab=96.59 E-value=0.0003 Score=53.30 Aligned_cols=38 Identities=26% Similarity=0.380 Sum_probs=33.5
Q ss_pred CccchhhHHHHHHHHHHhhhcccHHHHHHHHHhhcccCCC
Q 013993 385 SAMCSACEMAVIWMQNKLRRNETADQILNYVNQLCDRLPS 424 (432)
Q Consensus 385 ~~~C~~C~~~v~~~~~~l~~n~t~~~i~~~l~~~C~~lp~ 424 (432)
+..|.+|+++|+.+|..+.+ +.++|++++++.|.+++.
T Consensus 10 ~l~C~~C~~~Vk~~e~~i~~--~~~eie~~~d~~Ckk~~~ 47 (87)
T 3s64_A 10 VIVCEICKMAVKLIVPEADK--DLDQLEKEFIQGCMTLIG 47 (87)
T ss_dssp TTHHHHHHHHHHHHTTCSSC--SSTTHHHHHHHHHHHHHC
T ss_pred ccchHHHHHHHHHHHHhccC--CHHHHHHHHHHHHHHhcc
Confidence 67899999999999999864 555899999999999954
No 53
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=96.43 E-value=0.00012 Score=55.52 Aligned_cols=39 Identities=41% Similarity=0.902 Sum_probs=35.8
Q ss_pred eeeeccccccccccceehhhhhhccCccccccccccccc
Q 013993 319 VISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCTF 357 (432)
Q Consensus 319 ~~~~~C~~~v~~yg~~ii~~~~~~~~p~~ic~~~glC~~ 357 (432)
.+..+|+.++++|++.+|+++.+++.|+.+|..+|+|..
T Consensus 44 ~~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~~ 82 (83)
T 2gtg_A 44 SLSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSG 82 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTSCC-
T ss_pred cchhHHHHHHHHHHHHHHHHHHHCCCHHHHHHhcCCCCC
Confidence 377899999999999999999999999999999999974
No 54
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=96.20 E-value=0.00019 Score=54.29 Aligned_cols=37 Identities=30% Similarity=0.825 Sum_probs=33.3
Q ss_pred eeeeccccccccccceehhhhhhccCcccccccccccc
Q 013993 319 VISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLCT 356 (432)
Q Consensus 319 ~~~~~C~~~v~~yg~~ii~~~~~~~~p~~ic~~~glC~ 356 (432)
.++..|+.++++||+.+++++. ++.|+.+|..+|+|.
T Consensus 44 ~~~~~C~~~V~~y~~~ii~~l~-~~~P~~iC~~lglC~ 80 (81)
T 1n69_A 44 GMADICKNYISQYSEIAIQMMM-HMQPKEICALVGFCD 80 (81)
T ss_dssp THHHHHHHHHHHHHHHHHHHHT-TSCHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-cCCHHHHHhhcCCCC
Confidence 4789999999999998888776 689999999999996
No 55
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=96.10 E-value=0.00025 Score=52.46 Aligned_cols=36 Identities=19% Similarity=0.527 Sum_probs=32.8
Q ss_pred ce-eeeccccccccccceehhhhhhccCccccccccc
Q 013993 318 GV-ISQECKTLVDQYGKTILEMLIAETQPQKICSQMG 353 (432)
Q Consensus 318 g~-~~~~C~~~v~~yg~~ii~~~~~~~~p~~ic~~~g 353 (432)
+. |+..|+.++++|++.+++++.++..|+.+|.+++
T Consensus 38 ~~~~~~~C~~~V~~y~~~Ii~~L~~~~~P~~IC~~ik 74 (74)
T 1l9l_A 38 RSRWRDVCRNFMRRYQSRVIQGLVAGETAQQICEDLR 74 (74)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHGGGC
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcC
Confidence 44 8899999999999999999999999999998764
No 56
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=96.03 E-value=0.00023 Score=53.99 Aligned_cols=37 Identities=38% Similarity=0.856 Sum_probs=34.5
Q ss_pred eeeccccccccccceehhhhhhcc-Ccccccccccccc
Q 013993 320 ISQECKTLVDQYGKTILEMLIAET-QPQKICSQMGLCT 356 (432)
Q Consensus 320 ~~~~C~~~v~~yg~~ii~~~~~~~-~p~~ic~~~glC~ 356 (432)
+...|+.++++|++.+++++.+++ .|+.+|..+|+|.
T Consensus 45 ~~~~C~~~v~~y~~~ii~~l~~~~~~p~~vC~~l~lC~ 82 (83)
T 4ddj_A 45 MSASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNLCE 82 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHTTSCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHccCCHHHHHhHcCCCC
Confidence 578999999999999999999885 8999999999996
No 57
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=94.27 E-value=0.068 Score=44.77 Aligned_cols=91 Identities=16% Similarity=0.239 Sum_probs=52.5
Q ss_pred CCceEEEEEEecCCCcEEEEEeecCCCceeeeCCCCCCCcccccCCcccCCCCCCceeCCceEEEEeccCe--EEEEEEE
Q 013993 85 MDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTGA--ISGFFSQ 162 (432)
Q Consensus 85 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~gs--~~G~~~~ 162 (432)
.+..+++++.|+ ++++++++|||++.+.+..... ..+.-....+ ..+. ...+|.|. ..|.+..
T Consensus 23 ~~~~~~v~v~In--G~~~~~LvDTGAs~s~is~~~a---~~lgl~~~~~----~~~~------~~a~g~g~~~~~~~~~~ 87 (148)
T 2i1a_A 23 QVPMLYINIEIN--NYPVKAFVDTGAQTTIMSTRLA---KKTGLSRMID----KRFI------GEARGVGTGKIIGRIHQ 87 (148)
T ss_dssp CCCCCEEEEEET--TEEEEEEECTTCSSCEEEHHHH---HHHTGGGGCB----CCCC-----------------CEEEEE
T ss_pred ccceEEEEEEEC--CEEEEEEEECCCCccccCHHHH---HHcCCCccCC----cceE------EEEecCCCcccccEEEE
Confidence 456789999998 5899999999999988853211 0111101111 1111 01122221 2466677
Q ss_pred EEEEEceeEeeceeEEEEeeecccccccccccceeccc
Q 013993 163 DNVKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLG 200 (432)
Q Consensus 163 D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg 200 (432)
+.+.+|+...+ ..|.+.. .+.+||||+-
T Consensus 88 ~~i~ig~~~~~-~~~~vl~---------~~~d~iLG~d 115 (148)
T 2i1a_A 88 AQVKIETQYIP-CSFTVLD---------TDIDVLIGLD 115 (148)
T ss_dssp EEEEETTEEEE-EEEEEEC---------SSCSEEECHH
T ss_pred EEEEECCEEec-eeEEEec---------CCCCeEecHH
Confidence 89999997764 5555432 1358999985
No 58
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=91.28 E-value=0.31 Score=40.83 Aligned_cols=90 Identities=16% Similarity=0.309 Sum_probs=53.0
Q ss_pred ceEEEEEEecCCCcEEEEEeecCCCceeeeCCCCCCCcccccCCcccCCCCCCceeCCceEEEEeccC--eEEEEEEEEE
Q 013993 87 AQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVSCYFHSKYKSSHSSTYKRNGTSAAIQYGTG--AISGFFSQDN 164 (432)
Q Consensus 87 ~~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~~~Y~~g--s~~G~~~~D~ 164 (432)
.-|++++.|+ ++++++++|||++.+.+... |. ..|.-...-+. + +.. ...+-| ...|.+....
T Consensus 23 ~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~-~A--~rlGL~~~~~~-~---~~~------~a~g~G~~~~~g~v~~~~ 87 (148)
T 3s8i_A 23 TMLYINCKVN--GHPLKAFVDSGAQMTIMSQA-CA--ERCNIMRLVDR-R---WAG------VAKGVGTQRIIGRVHLAQ 87 (148)
T ss_dssp CCCEEEEEET--TEEEEEEECTTCSSCEEEHH-HH--HHTTCGGGEEG-G---GCE------ECCC---CEEEEEEEEEE
T ss_pred CEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH-HH--HHcCCccccCc-c---eeE------EEEcCCccEEEEEEEEEE
Confidence 4589999998 59999999999999998542 21 12211000000 0 000 011222 2467777789
Q ss_pred EEEceeEeeceeEEEEeeecccccccccccceeccc
Q 013993 165 VKVGDLVVKNQDFIEATKEASITFLAAKFDGILGLG 200 (432)
Q Consensus 165 v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg 200 (432)
+.+|+..++ ..|.+.. ....++|||+-
T Consensus 88 I~Ig~~~~~-~~~~Vle--------~~~~d~LLGmD 114 (148)
T 3s8i_A 88 IQIEGDFLQ-CSFSILE--------DQPMDMLLGLD 114 (148)
T ss_dssp EEETTEEEE-EEEEEET--------TCSSSEEECHH
T ss_pred EEECCEEEE-EEEEEeC--------CCCcCeeccHH
Confidence 999997653 4554432 12358999985
No 59
>3s64_A AC-SLP-1, saposin-like protein 1; lipid-binding, lipid binding protein; HET: CIT EPE; 2.30A {Ancylostoma caninum}
Probab=90.34 E-value=0.017 Score=43.72 Aligned_cols=36 Identities=28% Similarity=0.566 Sum_probs=33.6
Q ss_pred eeeccccccccccceehhhhhhccCccccccccccc
Q 013993 320 ISQECKTLVDQYGKTILEMLIAETQPQKICSQMGLC 355 (432)
Q Consensus 320 ~~~~C~~~v~~yg~~ii~~~~~~~~p~~ic~~~glC 355 (432)
...+|+.++++|.+.||+.+-++..|+.+|..++.|
T Consensus 52 a~k~C~~~v~~~~d~II~eLe~g~~P~~VC~~L~~C 87 (87)
T 3s64_A 52 AEKECKALAKIEMGAIKTLLENGSAPEEICTTLHAC 87 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCTTTHHHHHHCC
T ss_pred hHHHHHHHHHHhHHHHHHHHHcCCCHHHHHHHhccC
Confidence 457899999999999999999999999999999888
No 60
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=79.09 E-value=2.6 Score=32.57 Aligned_cols=29 Identities=21% Similarity=0.357 Sum_probs=24.6
Q ss_pred EEEEEecCCCcEEEEEeecCCCceeeeCCCC
Q 013993 90 FGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC 120 (432)
Q Consensus 90 ~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C 120 (432)
++.|.|| +|.+.+++|||.+++-+...+.
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~~~~ 38 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEEMSL 38 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESCCSS
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEecccC
Confidence 5678998 6999999999999999975544
No 61
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=78.50 E-value=2.2 Score=33.30 Aligned_cols=27 Identities=22% Similarity=0.279 Sum_probs=23.6
Q ss_pred EEEEEEecCCCcEEEEEeecCCCceeeeC
Q 013993 89 YFGEVSIGTPSQTFTVIFDTGSSNLWVPS 117 (432)
Q Consensus 89 Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~ 117 (432)
-++.|.|| +|.+.+++|||..++-+..
T Consensus 9 P~v~v~I~--Gq~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 9 PTTIVLIN--DTPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEcc
Confidence 46779999 6999999999999999973
No 62
>3vcm_P Prorenin; aspartic proteases, hydrolase; HET: NAG; 2.93A {Homo sapiens}
Probab=77.65 E-value=1.2 Score=28.62 Aligned_cols=23 Identities=13% Similarity=-0.102 Sum_probs=19.9
Q ss_pred ceEEEeeeeccchhhhhcccCcc
Q 013993 29 GLVRIGLRKKKLDQINRLVGQTV 51 (432)
Q Consensus 29 ~~~~vpl~k~~~~~~~~~~~~~~ 51 (432)
+++||||+|.++.++.+.+.+..
T Consensus 7 ~l~RIPL~k~kS~R~~l~e~g~~ 29 (43)
T 3vcm_P 7 TFKRIFLKRMPSIRESLKERGVD 29 (43)
T ss_dssp CCEEEEEEECCCHHHHHHHHTCC
T ss_pred ceeEEeeeecccHHHHHHHcCch
Confidence 57899999999999998887654
No 63
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=73.91 E-value=3.5 Score=32.53 Aligned_cols=32 Identities=19% Similarity=0.280 Sum_probs=26.2
Q ss_pred EEEEEec---CCCcEEEEEeecCCCceeeeCCCCC
Q 013993 90 FGEVSIG---TPSQTFTVIFDTGSSNLWVPSAKCY 121 (432)
Q Consensus 90 ~~~i~iG---tP~q~~~v~~DTGSs~~WV~~~~C~ 121 (432)
.+.|.|| +|+|.+..++|||-+++-+....+.
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~lP 46 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALFS 46 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGSC
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccCC
Confidence 4555665 8899999999999999999876663
No 64
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=73.22 E-value=4.3 Score=31.24 Aligned_cols=29 Identities=24% Similarity=0.303 Sum_probs=24.5
Q ss_pred EEEEEecCCCcEEEEEeecCCCceeeeCCCC
Q 013993 90 FGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC 120 (432)
Q Consensus 90 ~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C 120 (432)
++.|.|| +|.+.+++|||.+++-+...+.
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~~~ 38 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGIEL 38 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSCCC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCccc
Confidence 6778998 6999999999999999965443
No 65
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=69.30 E-value=3.6 Score=34.22 Aligned_cols=29 Identities=17% Similarity=0.280 Sum_probs=24.0
Q ss_pred EEECCeeeeecCCCceEEEcCCCcCcccCHHHHHHH
Q 013993 275 VLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQI 310 (432)
Q Consensus 275 i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~~~~~i 310 (432)
+.|||..+ .+++|||++.+.++.+.++++
T Consensus 29 ~~Ing~~v-------~~LVDTGAs~s~Is~~~A~rl 57 (148)
T 3s8i_A 29 CKVNGHPL-------KAFVDSGAQMTIMSQACAERC 57 (148)
T ss_dssp EEETTEEE-------EEEECTTCSSCEEEHHHHHHT
T ss_pred EEECCEEE-------EEEEeCCCCcEeeCHHHHHHc
Confidence 45777755 489999999999999888776
No 66
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=69.21 E-value=4.3 Score=33.40 Aligned_cols=29 Identities=17% Similarity=0.243 Sum_probs=24.0
Q ss_pred EEECCeeeeecCCCceEEEcCCCcCcccCHHHHHHH
Q 013993 275 VLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQI 310 (432)
Q Consensus 275 i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~~~~~i 310 (432)
+.|||+.. .+++|||++.+.++.+.++.+
T Consensus 31 v~InG~~~-------~~LvDTGAs~s~is~~~a~~l 59 (148)
T 2i1a_A 31 IEINNYPV-------KAFVDTGAQTTIMSTRLAKKT 59 (148)
T ss_dssp EEETTEEE-------EEEECTTCSSCEEEHHHHHHH
T ss_pred EEECCEEE-------EEEEECCCCccccCHHHHHHc
Confidence 56788754 489999999999999888765
No 67
>1htr_P Progastricsin (Pro segment); aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_P
Probab=66.83 E-value=2.4 Score=26.66 Aligned_cols=22 Identities=18% Similarity=0.083 Sum_probs=18.2
Q ss_pred eEEEeeeeccchhhhhcccCcc
Q 013993 30 LVRIGLRKKKLDQINRLVGQTV 51 (432)
Q Consensus 30 ~~~vpl~k~~~~~~~~~~~~~~ 51 (432)
++||||+|.++.+..+.+.+..
T Consensus 2 l~RIpL~K~~s~R~~l~~~g~~ 23 (43)
T 1htr_P 2 VVKVPLKKFKSIRETMKEKGLL 23 (43)
T ss_dssp CEEEEEEECCCHHHHHHHTTCH
T ss_pred eEEEeeeEcchHHHHHHHcCcH
Confidence 6899999999999888776643
No 68
>1tzs_P Activation peptide from cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=66.32 E-value=2.6 Score=25.06 Aligned_cols=22 Identities=18% Similarity=0.138 Sum_probs=17.7
Q ss_pred ceEEEeeeeccchhhhhcccCc
Q 013993 29 GLVRIGLRKKKLDQINRLVGQT 50 (432)
Q Consensus 29 ~~~~vpl~k~~~~~~~~~~~~~ 50 (432)
+++||||+|.++.+..+.+.+.
T Consensus 2 ~l~rIpL~K~~s~r~~l~~~g~ 23 (35)
T 1tzs_P 2 SLHRVPLRRHPSLKKKLRARSQ 23 (35)
T ss_pred cEEEEEeEEchHHHHHHHHccc
Confidence 4789999999988888776553
No 69
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=64.98 E-value=6.2 Score=31.33 Aligned_cols=27 Identities=11% Similarity=0.142 Sum_probs=22.9
Q ss_pred EEEEEEecCCCcEEEEEeecCCCceeeeCC
Q 013993 89 YFGEVSIGTPSQTFTVIFDTGSSNLWVPSA 118 (432)
Q Consensus 89 Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~ 118 (432)
=++ |.|| +|.+.+++|||.+++-+...
T Consensus 15 P~v-ikI~--Gq~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 15 EIL-IFVN--GYPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EEE-EEET--TEEEEEEECTTCSSCEEEGG
T ss_pred CEE-EEEC--CEEEEEEecCCCCcEEEccc
Confidence 355 8998 69999999999999998653
No 70
>2w50_A ArMet-like protein 1; MANF, CDNF, saposin, secreted, ER stress, alternative splicing, hormone, growth factor, neurotrophic factor; 1.60A {Homo sapiens}
Probab=57.72 E-value=12 Score=28.81 Aligned_cols=36 Identities=17% Similarity=0.229 Sum_probs=30.6
Q ss_pred cchhhHHHHHHHHHHhhhc---ccHHHHHHHHHhhcccC
Q 013993 387 MCSACEMAVIWMQNKLRRN---ETADQILNYVNQLCDRL 422 (432)
Q Consensus 387 ~C~~C~~~v~~~~~~l~~n---~t~~~i~~~l~~~C~~l 422 (432)
.|++|.-++..+.+.|... .....|+.+|-+.|...
T Consensus 5 ~CEVCvk~l~~f~~sl~~~~~~~~~~~IE~~l~~~C~~~ 43 (102)
T 2w50_A 5 DCEVCKEFLNRFYKSLIDRGVNFSLDTIEKELISFCLDT 43 (102)
T ss_dssp TTHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTC
T ss_pred CchhhHHHHHHHHHhcchhccccCHHHHHHHHHHHHhhc
Confidence 6999999999998888874 37899999999888653
No 71
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=57.43 E-value=11 Score=29.82 Aligned_cols=29 Identities=14% Similarity=0.151 Sum_probs=24.7
Q ss_pred EEEEEecCCCcEEEEEeecCCCceeeeCCCC
Q 013993 90 FGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC 120 (432)
Q Consensus 90 ~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~C 120 (432)
.+.|.|| +|.+..++|||-+++-+...+.
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~~l 39 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLEDW 39 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGGGS
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEecccC
Confidence 5678888 6999999999999999976554
No 72
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=54.65 E-value=14 Score=30.04 Aligned_cols=30 Identities=20% Similarity=0.268 Sum_probs=24.8
Q ss_pred eEEEEEEecCCCcEEEEEeecCCCceeeeCCC
Q 013993 88 QYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAK 119 (432)
Q Consensus 88 ~Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~ 119 (432)
.-++.+.|+ +|.+.+++|||.+++-+....
T Consensus 22 RP~v~i~I~--G~~~~~LlDTGAd~tVl~~~~ 51 (132)
T 3slz_A 22 EPRITLKVG--GQPVTFLVDTGAQHSVLTQNP 51 (132)
T ss_dssp SSEEEEEET--TEEEEEEECTTCSSCEECSCC
T ss_pred CCEEEEEEC--CEEEEEEEeCCCCeEEEcccc
Confidence 356778998 599999999999999996543
No 73
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=45.11 E-value=19 Score=31.49 Aligned_cols=28 Identities=21% Similarity=0.330 Sum_probs=24.0
Q ss_pred EEEEEEecCCCcEEEEEeecCCCceeeeCC
Q 013993 89 YFGEVSIGTPSQTFTVIFDTGSSNLWVPSA 118 (432)
Q Consensus 89 Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~ 118 (432)
-.+.|.|| +|.+.+++|||.+++-+...
T Consensus 9 P~vtv~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (203)
T 3ka2_A 9 PLVTIRIG--GQLKEALLDTGADDTVIEEL 36 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEecc
Confidence 46789999 69999999999999998643
No 74
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=41.49 E-value=26 Score=28.01 Aligned_cols=24 Identities=17% Similarity=0.224 Sum_probs=19.8
Q ss_pred ecCCCcEEEEEeecCCCceeeeCCCC
Q 013993 95 IGTPSQTFTVIFDTGSSNLWVPSAKC 120 (432)
Q Consensus 95 iGtP~q~~~v~~DTGSs~~WV~~~~C 120 (432)
|| +|.+..++|||-+++-+...+.
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~~l 50 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEEDW 50 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETTTS
T ss_pred CC--CEEEEEEecCCCCcEEEecccC
Confidence 55 4788999999999999986554
No 75
>3a4c_A DNA replication factor CDT1; alpha-beta structure, cell cycle, DNA- binding, nucleus, phosphoprotein, proto-oncogene, UBL conjugation; HET: DNA; 1.89A {Mus musculus} PDB: 2rqq_A*
Probab=38.40 E-value=22 Score=27.53 Aligned_cols=33 Identities=15% Similarity=0.221 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhhhcccHHHHHHHHHhhcccCCC
Q 013993 392 EMAVIWMQNKLRRNETADQILNYVNQLCDRLPS 424 (432)
Q Consensus 392 ~~~v~~~~~~l~~n~t~~~i~~~l~~~C~~lp~ 424 (432)
+.++..+++--...-|..|++..|+.+|+.+|.
T Consensus 37 e~~~~ki~~Syr~~ls~~EmE~hl~lL~ellPd 69 (106)
T 3a4c_A 37 EVVCARMVDSCQTALSPGEMEKHLVLLAELLPD 69 (106)
T ss_dssp HHHHHHHHHTSCCSCCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHhhhhccCCHHHHHHHHHHHHHhCcc
Confidence 567778888888999999999999999999996
No 76
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=36.70 E-value=32 Score=32.02 Aligned_cols=43 Identities=26% Similarity=0.190 Sum_probs=30.7
Q ss_pred ccceEEEecCCCCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHHH
Q 013993 254 KGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTI 306 (432)
Q Consensus 254 ~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~~ 306 (432)
.|.+...|+....+|.++ |.||.+ ...+++|||++.+++|...
T Consensus 3 ~g~v~~~~~~~~~~Y~~~---i~iG~Q-------~~~v~~DTGSs~lWv~~~~ 45 (323)
T 1bxo_A 3 SGVATNTPTANDEEYITP---VTIGGT-------TLNLNFDTGSADLWVFSTE 45 (323)
T ss_dssp CEEEEEEECGGGSCEEEE---EEETTE-------EEEEEEETTCCCEEECBTT
T ss_pred CCceeeeecCCCCEEEEE---EEECCE-------EEEEEEeCCCcceEEecCC
Confidence 356666777666667654 678833 3468999999999998643
No 77
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=36.50 E-value=36 Score=31.72 Aligned_cols=43 Identities=16% Similarity=0.117 Sum_probs=30.1
Q ss_pred cceEEEecCCCCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHHHH
Q 013993 255 GEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTII 307 (432)
Q Consensus 255 g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~~~ 307 (432)
|.+...|+....+|.+ .|.||.+ ...+++|||++.+++|....
T Consensus 4 ~~v~~~~~~~~~~Y~~---~i~iG~q-------~~~v~~DTGSs~lWv~~~~C 46 (323)
T 1izd_A 4 GSVTTNPTSNDEEYIT---QVTVGDD-------TLGLDFDTGSADLWVFSSQT 46 (323)
T ss_dssp EEEEEEECGGGCCEEE---EEEETTE-------EEEEEEETTCCCEEECBTTS
T ss_pred CceeeeEcCCCCEEEE---EEEECCE-------EEEEEEcCCCcceEEecCCC
Confidence 5566667766666664 4678733 34689999999999986533
No 78
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=35.24 E-value=34 Score=31.87 Aligned_cols=43 Identities=14% Similarity=0.082 Sum_probs=30.3
Q ss_pred cceEEEecCCCCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHHHH
Q 013993 255 GEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTII 307 (432)
Q Consensus 255 g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~~~ 307 (432)
|.+...|+....+|.++ |.||.+ ...+++|||++.+++|....
T Consensus 3 ~~v~~~~~~~~~~Y~~~---i~iG~Q-------~~~v~~DTGSs~lWv~~~~C 45 (325)
T 1ibq_A 3 GSAVTTPQNNDEEYLTP---VTVGKS-------TLHLDFDTGSADLWVFSDEL 45 (325)
T ss_dssp EEEEEEECTTTSCEEEE---EEEBTE-------EEEEEEETTCCCEEEECTTS
T ss_pred ceEEeEEcCCCCEEEEE---EEECCE-------EEEEEEeCCCccceEeeCCC
Confidence 55666677666667654 677733 34689999999999986433
No 79
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=35.18 E-value=35 Score=30.24 Aligned_cols=39 Identities=26% Similarity=0.219 Sum_probs=27.2
Q ss_pred eeeecccCCceEEEE---EEecC-----CCcEEEEEeecCCCceeeeCC
Q 013993 78 IVALNNFMDAQYFGE---VSIGT-----PSQTFTVIFDTGSSNLWVPSA 118 (432)
Q Consensus 78 ~~~l~~~~~~~Y~~~---i~iGt-----P~q~~~v~~DTGSs~~WV~~~ 118 (432)
.+|+.+ +..|.++ |.||. +.....+++|||++.+++|..
T Consensus 181 ~~p~~~--~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~ 227 (239)
T 1b5f_A 181 YVPVTY--QYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTA 227 (239)
T ss_dssp EEEEEE--ETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHH
T ss_pred EEEccc--CCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHH
Confidence 356654 2456554 77875 234578999999999999864
No 80
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=34.59 E-value=47 Score=26.05 Aligned_cols=35 Identities=17% Similarity=0.354 Sum_probs=29.3
Q ss_pred CCccchhhHHHHHHHHH---------HhhhcccHHHHHHHHHhh
Q 013993 384 DSAMCSACEMAVIWMQN---------KLRRNETADQILNYVNQL 418 (432)
Q Consensus 384 ~~~~C~~C~~~v~~~~~---------~l~~n~t~~~i~~~l~~~ 418 (432)
..+.|..|+.+..|++. ..++..|++|+.+.+++.
T Consensus 10 ~~p~C~~c~ka~~~L~~~gi~~~~~di~~~~~t~~eL~~~l~~~ 53 (119)
T 3f0i_A 10 HNPKCSKSRETLALLENQGIAPQVIKYLETSPSVEELKRLYQQL 53 (119)
T ss_dssp CCTTCHHHHHHHHHHHHTTCCCEEECHHHHCCCHHHHHHHHHHH
T ss_pred ECCCChHHHHHHHHHHHcCCceEEEEeccCcCcHHHHHHHHHHc
Confidence 46779999999999986 456778999999988765
No 81
>2hl7_A Cytochrome C-type biogenesis protein CCMH; three-helices bundle, oxidoreductase; HET: PG4; 1.70A {Pseudomonas aeruginosa}
Probab=29.23 E-value=70 Score=23.59 Aligned_cols=33 Identities=9% Similarity=0.187 Sum_probs=28.7
Q ss_pred CccchhhHHHHHHHHHHhhhcccHHHHHHHHHh
Q 013993 385 SAMCSACEMAVIWMQNKLRRNETADQILNYVNQ 417 (432)
Q Consensus 385 ~~~C~~C~~~v~~~~~~l~~n~t~~~i~~~l~~ 417 (432)
+....+..-+-..+-.+|++.+|.+||+.+|-.
T Consensus 39 dSna~iA~dlR~~V~~~l~~G~sd~eI~~~~v~ 71 (84)
T 2hl7_A 39 DSNAPIAADLRKQIYGQLQQGKSDGEIVDYMVA 71 (84)
T ss_dssp TCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred hcCcHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 455688888999999999999999999999853
No 82
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=28.52 E-value=38 Score=26.13 Aligned_cols=35 Identities=20% Similarity=0.139 Sum_probs=25.9
Q ss_pred ceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHHHHHH
Q 013993 268 WQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQ 309 (432)
Q Consensus 268 w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~~~~~ 309 (432)
|+=.+-.+.|+|+.. .+++|||+-.+.+.......
T Consensus 6 ~~RP~v~v~I~Gq~~-------e~LLDTGAD~TVl~~~~w~~ 40 (104)
T 1fmb_A 6 EKRPTTIVLINDTPL-------NVLLDTGADTSVLTTAHYNR 40 (104)
T ss_dssp SSCCEEEEEETTEEE-------EEEECTTCSSCEEEHHHHHH
T ss_pred cCCCEEEEEECCEEE-------EEEeccCCCcEEEccccCcc
Confidence 444455688888754 48999999999998765533
No 83
>3s63_A Na-SLP-1, saposin-like protein; lipid-binding, lipid binding protein; 2.70A {Necator americanus}
Probab=27.65 E-value=69 Score=24.33 Aligned_cols=38 Identities=16% Similarity=0.410 Sum_probs=33.2
Q ss_pred cchhhHHHHHHHHHHhhhc-ccHHHHHHHHHhhcccCCC
Q 013993 387 MCSACEMAVIWMQNKLRRN-ETADQILNYVNQLCDRLPS 424 (432)
Q Consensus 387 ~C~~C~~~v~~~~~~l~~n-~t~~~i~~~l~~~C~~lp~ 424 (432)
.|+.|..+.+-+=.++..| +.+....+.|...|.+-+.
T Consensus 6 nCd~Cv~VL~cVfGhfgksV~SkR~L~~kL~htCKRyfq 44 (117)
T 3s63_A 6 TCDLCQIALRTVFGHFGGNIPSRRKLVHQLKHECKRHFN 44 (117)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHTTCTT
T ss_pred ccHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHH
Confidence 4999999999998888766 6899999999999998764
No 84
>2kw0_A CCMH protein; oxidoreductase, cytochrome C maturation; NMR {Escherichia coli}
Probab=27.17 E-value=93 Score=23.25 Aligned_cols=33 Identities=6% Similarity=0.097 Sum_probs=28.3
Q ss_pred CccchhhHHHHHHHHHHhhhcccHHHHHHHHHh
Q 013993 385 SAMCSACEMAVIWMQNKLRRNETADQILNYVNQ 417 (432)
Q Consensus 385 ~~~C~~C~~~v~~~~~~l~~n~t~~~i~~~l~~ 417 (432)
+....+..-+-..+-.+|++.+|.+||+.+|-.
T Consensus 36 dSnA~iA~dlR~~Vre~l~~G~Sd~eI~~~mv~ 68 (90)
T 2kw0_A 36 DSNSMIATDLRQKVYELMQEGKSKKEIVDYMVA 68 (90)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred hcCcHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 444678888999999999999999999999853
No 85
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=26.74 E-value=50 Score=25.98 Aligned_cols=35 Identities=17% Similarity=0.343 Sum_probs=28.7
Q ss_pred CCccchhhHHHHHHHHH---------HhhhcccHHHHHHHHHhh
Q 013993 384 DSAMCSACEMAVIWMQN---------KLRRNETADQILNYVNQL 418 (432)
Q Consensus 384 ~~~~C~~C~~~v~~~~~---------~l~~n~t~~~i~~~l~~~ 418 (432)
..+.|..|..+..|++. ..++..|.+++...++++
T Consensus 11 ~~p~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~~ 54 (121)
T 3rdw_A 11 HNPRCSKSRETLALVEQQGITPQVVLYLETPPSVDKLKELLQQL 54 (121)
T ss_dssp CCTTCHHHHHHHHHHHTTTCCCEEECTTTSCCCHHHHHHHHHHT
T ss_pred ECCCCHHHHHHHHHHHHcCCCcEEEeeccCCCcHHHHHHHHHhc
Confidence 46779999999999986 355678999999888765
No 86
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=26.37 E-value=68 Score=29.78 Aligned_cols=43 Identities=21% Similarity=0.051 Sum_probs=28.3
Q ss_pred cceEEE-ecCCCCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHH
Q 013993 255 GEHTYV-PVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTT 305 (432)
Q Consensus 255 g~l~~~-pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~ 305 (432)
|.+... |......|.+ .|.||.- .+...+++|||++.+++|..
T Consensus 3 ~~v~~~~~~~~~~~Y~~---~i~iGTP-----~Q~~~v~~DTGSs~lWv~~~ 46 (329)
T 1oew_A 3 GSATTTPIDSLDDAYIT---PVQIGTP-----AQTLNLDFDTGSSDLWVFSS 46 (329)
T ss_dssp EEEEEEESSTTCCCEEE---EEEETTT-----TEEEEEEEETTCCCEEECBT
T ss_pred ceeEeeecCCCCCEEEE---EEEECCC-----CeEEEEEECCCCCCeEEecC
Confidence 344445 5555556654 4677742 23457999999999999864
No 87
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=26.09 E-value=55 Score=25.68 Aligned_cols=35 Identities=20% Similarity=0.344 Sum_probs=29.3
Q ss_pred CCccchhhHHHHHHHHHH---------hhhcccHHHHHHHHHhh
Q 013993 384 DSAMCSACEMAVIWMQNK---------LRRNETADQILNYVNQL 418 (432)
Q Consensus 384 ~~~~C~~C~~~v~~~~~~---------l~~n~t~~~i~~~l~~~ 418 (432)
..+.|.-|+.+..|++.. .++..|.+|+.+.++++
T Consensus 9 ~~~~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~~ 52 (120)
T 3fz4_A 9 EYPKCSTCRRAKAELDDLAWDYDAIDIKKNPPAASLIRNWLENS 52 (120)
T ss_dssp ECSSCHHHHHHHHHHHHHTCCEEEEETTTSCCCHHHHHHHHHHS
T ss_pred eCCCChHHHHHHHHHHHcCCceEEEEeccCchhHHHHHHHHHHc
Confidence 357799999999999873 56778999999998875
No 88
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=25.95 E-value=44 Score=25.53 Aligned_cols=30 Identities=20% Similarity=0.349 Sum_probs=22.8
Q ss_pred ceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCH
Q 013993 268 WQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPT 304 (432)
Q Consensus 268 w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~ 304 (432)
|+=.+-.+.|+|+.. .+++|||+-.+.+..
T Consensus 6 ~~rP~vtvkI~Gq~~-------eaLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 6 WKRPLVTIKIGGQLK-------EALLDTGADDTIIEE 35 (99)
T ss_dssp SSCCEEEEEETTEEE-------EEEECTTCSSEEESC
T ss_pred cCCCEEEEEECCEEE-------EEEeccCCCcEEEec
Confidence 544555688888865 489999999988764
No 89
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=25.95 E-value=53 Score=30.98 Aligned_cols=44 Identities=16% Similarity=0.094 Sum_probs=29.7
Q ss_pred ccceEEEecCC--CCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHH
Q 013993 254 KGEHTYVPVTK--KGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTT 305 (432)
Q Consensus 254 ~g~l~~~pv~~--~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~ 305 (432)
+|.+...|+.. ..+|.+ .|.||.- .+...+++|||++.+++|..
T Consensus 4 ~g~~~~~~l~~~~~~~Y~~---~i~iGtP-----~q~~~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 4 DGSVDTPGLYDFDLEEYAI---PVSIGTP-----GQDFYLLFDTGSSDTWVPHK 49 (361)
T ss_dssp -CCEEEEEEEETTTTEEEE---EEEETTT-----TEEEEEEEETTCCCCEEEBT
T ss_pred CCccceEEeecCCCCEEEE---EEEECCC-----CcEEEEEEcCCCCCeEECCC
Confidence 46667778764 345654 4677742 23456999999999999864
No 90
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=25.50 E-value=72 Score=29.60 Aligned_cols=45 Identities=16% Similarity=-0.017 Sum_probs=29.0
Q ss_pred cceEEE-ecCCCCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHHHH
Q 013993 255 GEHTYV-PVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTII 307 (432)
Q Consensus 255 g~l~~~-pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~~~ 307 (432)
|.+... |.....+|.+ .|.||.- .+...+++|||++.+++|....
T Consensus 3 ~~v~~~~~~~~~~~Y~~---~i~iGTP-----~Q~~~v~~DTGSs~lWv~~~~C 48 (329)
T 3c9x_A 3 GSAPNHPSDSADSEYIT---SVSIGTP-----AQVLPLDFDTGSSDLWVFSSET 48 (329)
T ss_dssp EEEEEEESSTTCCCEEE---EEEETTT-----TEEEEEEEETTCCCEEECBTTS
T ss_pred cceeeecCCCCCCEEEE---EEEECCC-----CeEEEEEEcCCCCCeEEecCCC
Confidence 444455 4445556654 4677742 2345799999999999986533
No 91
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=25.33 E-value=62 Score=25.37 Aligned_cols=35 Identities=20% Similarity=0.493 Sum_probs=28.8
Q ss_pred CCccchhhHHHHHHHHH---------HhhhcccHHHHHHHHHhh
Q 013993 384 DSAMCSACEMAVIWMQN---------KLRRNETADQILNYVNQL 418 (432)
Q Consensus 384 ~~~~C~~C~~~v~~~~~---------~l~~n~t~~~i~~~l~~~ 418 (432)
..+.|..|..+..|++. ..++..|.+++.+.++++
T Consensus 10 ~~p~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~~ 53 (120)
T 3gkx_A 10 QYPACSTCQKAKKWLIENNIEYTNRLIVDDNPTVEELKAWIPLS 53 (120)
T ss_dssp ECTTCHHHHHHHHHHHHTTCCCEEEETTTTCCCHHHHHHHHHHH
T ss_pred ECCCChHHHHHHHHHHHcCCceEEEecccCcCCHHHHHHHHHHc
Confidence 36779999999999986 356778999999888764
No 92
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=24.91 E-value=56 Score=31.42 Aligned_cols=42 Identities=10% Similarity=0.188 Sum_probs=26.5
Q ss_pred ceeeecccCCceEEEE---EEecC------CCcEE--------EEEeecCCCceeeeCC
Q 013993 77 DIVALNNFMDAQYFGE---VSIGT------PSQTF--------TVIFDTGSSNLWVPSA 118 (432)
Q Consensus 77 ~~~~l~~~~~~~Y~~~---i~iGt------P~q~~--------~v~~DTGSs~~WV~~~ 118 (432)
..+|+.......|.++ |.||. |+..+ .+++|||++.+++|..
T Consensus 218 ~~~Pl~~~~~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~ 276 (403)
T 3aup_A 218 AFTPLTITLQGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQS 276 (403)
T ss_dssp EEEECEECTTSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHH
T ss_pred eecccccCCCCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHH
Confidence 3567765433567765 66874 11112 1899999999999864
No 93
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=24.89 E-value=41 Score=26.50 Aligned_cols=31 Identities=13% Similarity=0.139 Sum_probs=24.5
Q ss_pred CcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCH
Q 013993 266 GYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPT 304 (432)
Q Consensus 266 ~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~ 304 (432)
..|+=.+- +.|+|+.+ .+++|||+-.+.+..
T Consensus 10 ~l~~rP~v-ikI~Gq~~-------eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 10 LEKRPEIL-IFVNGYPI-------KFLLDTGADITVLNR 40 (116)
T ss_dssp SSSCCEEE-EEETTEEE-------EEEECTTCSSCEEEG
T ss_pred cccCCCEE-EEECCEEE-------EEEecCCCCcEEEcc
Confidence 35766667 99999865 489999999998774
No 94
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=24.64 E-value=47 Score=25.39 Aligned_cols=30 Identities=17% Similarity=0.358 Sum_probs=22.7
Q ss_pred cceEEeceEEECCeeeeecCCCceEEEcCCCcCcccC
Q 013993 267 YWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGP 303 (432)
Q Consensus 267 ~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP 303 (432)
-|+=.+-.+.|+|+.+ .+++|||+..+.+.
T Consensus 5 l~~RP~vti~I~Gq~~-------e~LLDTGAD~TVl~ 34 (99)
T 3ec0_A 5 LWKRPVVTAYIEGQPV-------EVLLDTGADDSIVA 34 (99)
T ss_dssp SSSCCEEEEEETTEEE-------EEEECTTCSSCEES
T ss_pred cccCCeEEEEECCEEE-------EEEEecCCCceEEc
Confidence 3555566688999865 48999999988773
No 95
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=23.26 E-value=68 Score=28.16 Aligned_cols=40 Identities=20% Similarity=0.289 Sum_probs=27.4
Q ss_pred eeeecccCCceEEE---EEEecCC----CcEEEEEeecCCCceeeeCCC
Q 013993 78 IVALNNFMDAQYFG---EVSIGTP----SQTFTVIFDTGSSNLWVPSAK 119 (432)
Q Consensus 78 ~~~l~~~~~~~Y~~---~i~iGtP----~q~~~v~~DTGSs~~WV~~~~ 119 (432)
.+|+.+ ...|.+ .|.||.- .....+++|||++.+++|...
T Consensus 92 ~~p~~~--~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~ 138 (241)
T 1lya_B 92 YLNVTR--KAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDE 138 (241)
T ss_dssp EEECSS--BTTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHH
T ss_pred EEECcc--ccEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHH
Confidence 356654 334555 4778752 345789999999999998753
No 96
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=23.21 E-value=95 Score=23.83 Aligned_cols=33 Identities=9% Similarity=0.310 Sum_probs=26.3
Q ss_pred CccchhhHHHHHHHHHH---------hhhcccHHHHHHHHHh
Q 013993 385 SAMCSACEMAVIWMQNK---------LRRNETADQILNYVNQ 417 (432)
Q Consensus 385 ~~~C~~C~~~v~~~~~~---------l~~n~t~~~i~~~l~~ 417 (432)
.+.|..|+.+..+++.. .++..|.+++...+++
T Consensus 7 ~~~C~~C~kak~~L~~~gi~~~~~di~~~~~~~~~l~~~~~~ 48 (114)
T 1rw1_A 7 IKACDTMKKARTWLDEHKVAYDFHDYKAVGIDREHLRRWCAE 48 (114)
T ss_dssp CSSCHHHHHHHHHHHHTTCCEEEEEHHHHCCCHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHCCCceEEEeecCCCCCHHHHHHHHHh
Confidence 56799999999999863 4566788888888764
No 97
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=22.07 E-value=79 Score=27.52 Aligned_cols=29 Identities=21% Similarity=0.328 Sum_probs=24.1
Q ss_pred EEEEEEecCCCcEEEEEeecCCCceeeeCCC
Q 013993 89 YFGEVSIGTPSQTFTVIFDTGSSNLWVPSAK 119 (432)
Q Consensus 89 Y~~~i~iGtP~q~~~v~~DTGSs~~WV~~~~ 119 (432)
=.+.+.|| +|.+..++|||.+++-+...+
T Consensus 113 P~~~iki~--Gq~~e~LlDTGAD~TVl~~~~ 141 (203)
T 3ka2_A 113 PLVTIRIG--GQLKEALLDTGADDTVIEELN 141 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECSCC
T ss_pred CcEEEEEC--CEEEeeeecccCCceeeeccc
Confidence 46778998 599999999999999985443
No 98
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=21.69 E-value=79 Score=25.59 Aligned_cols=35 Identities=9% Similarity=0.282 Sum_probs=28.4
Q ss_pred CCccchhhHHHHHHHHHH---------hhhcccHHHHHHHHHhh
Q 013993 384 DSAMCSACEMAVIWMQNK---------LRRNETADQILNYVNQL 418 (432)
Q Consensus 384 ~~~~C~~C~~~v~~~~~~---------l~~n~t~~~i~~~l~~~ 418 (432)
..+.|..|+.+..|++.. .++..|.+++...+++.
T Consensus 8 ~~p~C~~crkak~~L~~~gi~~~~idi~~~~~~~~eL~~~~~~~ 51 (141)
T 1s3c_A 8 HNPASGTSRNTLEMIRNSGTEPTIILYLENPPSRDELVKLIADM 51 (141)
T ss_dssp CCTTCHHHHHHHHHHHHTTCCCEEECTTTSCCCHHHHHHHHHHH
T ss_pred ECCCChHHHHHHHHHHHcCCCEEEEECCCCCccHHHHHHHhccc
Confidence 367799999999999864 56678999998888764
No 99
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=21.66 E-value=86 Score=29.00 Aligned_cols=42 Identities=19% Similarity=-0.001 Sum_probs=26.3
Q ss_pred ceEEEecCCCCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHH
Q 013993 256 EHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTT 305 (432)
Q Consensus 256 ~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~ 305 (432)
.+.-.+......|.+ .|.||.- .+...+++|||++.+++|..
T Consensus 5 ~v~~~~~~~~~~Y~~---~i~iGTP-----~q~~~v~~DTGSs~lWv~~~ 46 (325)
T 2apr_A 5 TVPMTDYGNDIEYYG---QVTIGTP-----GKKFNLDFDTGSSDLWIAST 46 (325)
T ss_dssp EEEEEEETTTTEEEE---EEEETTT-----TEEEEEEEETTCCCCEEEBT
T ss_pred ceeeeecCCCCEEEE---EEEECCC-----CeEEEEEEcCCCCCEEEccC
Confidence 333344344455654 4677732 23457999999999999854
No 100
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=21.57 E-value=77 Score=31.43 Aligned_cols=39 Identities=26% Similarity=0.290 Sum_probs=27.3
Q ss_pred eeeecccCCceEEEE---EEecC-----CCcEEEEEeecCCCceeeeCC
Q 013993 78 IVALNNFMDAQYFGE---VSIGT-----PSQTFTVIFDTGSSNLWVPSA 118 (432)
Q Consensus 78 ~~~l~~~~~~~Y~~~---i~iGt-----P~q~~~v~~DTGSs~~WV~~~ 118 (432)
.+|+.+ ...|.++ |.||. +.....+++|||++.+++|..
T Consensus 224 ~~pv~~--~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~ 270 (478)
T 1qdm_A 224 YVPVTQ--KGYWQFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTA 270 (478)
T ss_dssp EEEEEE--ETTEEEEECCEEETTEECSTTTTCEEEEECSSCCSEEECHH
T ss_pred EEeccC--CCeEEEEEeEEEECCEEEeecCCCceEEEcCCCCceeCCHH
Confidence 356654 3456554 67774 235678999999999999864
No 101
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=21.42 E-value=47 Score=30.96 Aligned_cols=40 Identities=28% Similarity=0.276 Sum_probs=27.0
Q ss_pred eeeecccCCceEEEE---EEecCC---CcEEEEEeecCCCceeeeCCC
Q 013993 78 IVALNNFMDAQYFGE---VSIGTP---SQTFTVIFDTGSSNLWVPSAK 119 (432)
Q Consensus 78 ~~~l~~~~~~~Y~~~---i~iGtP---~q~~~v~~DTGSs~~WV~~~~ 119 (432)
.+|+.+ ...|.++ |.||.- .....+++|||++.+++|...
T Consensus 186 ~~p~~~--~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTs~~~lP~~~ 231 (330)
T 1yg9_A 186 YVPLVG--DDSWKFRLDGVKIGDTTVAPAGTQAIIDTSKAIIVGPKAY 231 (330)
T ss_dssp EEEBSC--TTSCCEECSEEEETTEEEECTTCEEEECTTCSSEEEEHHH
T ss_pred EEECCC--CCEEEEEeCeEEECCEEEcCCCcEEEEecCCccccCCHHH
Confidence 356653 3445454 778751 234679999999999999754
No 102
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=21.36 E-value=85 Score=29.06 Aligned_cols=41 Identities=29% Similarity=0.315 Sum_probs=28.2
Q ss_pred eeeecccCCceEEE---EEEecCC-----CcEEEEEeecCCCceeeeCCCC
Q 013993 78 IVALNNFMDAQYFG---EVSIGTP-----SQTFTVIFDTGSSNLWVPSAKC 120 (432)
Q Consensus 78 ~~~l~~~~~~~Y~~---~i~iGtP-----~q~~~v~~DTGSs~~WV~~~~C 120 (432)
.+|+.+ +..|.+ .|.||.- .....+++|||++.+++|....
T Consensus 182 ~~p~~~--~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~ 230 (329)
T 1htr_B 182 WAPVTQ--ELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQYM 230 (329)
T ss_dssp EEEBCS--SSSCEEEECEEEETTEECCTTTTCEEEEECTTCCSEEEEGGGH
T ss_pred EEECCC--CceEEEEEeEEEECCceeeecCCCceEEEecCCccEECCHHHH
Confidence 356654 344555 4678751 3457899999999999997643
No 103
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=20.53 E-value=41 Score=31.23 Aligned_cols=42 Identities=19% Similarity=0.262 Sum_probs=27.2
Q ss_pred ceEEEecCC--CCcceEEeceEEECCeeeeecCCCceEEEcCCCcCcccCHH
Q 013993 256 EHTYVPVTK--KGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTT 305 (432)
Q Consensus 256 ~l~~~pv~~--~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGts~~~lP~~ 305 (432)
+....|+.+ ...|.+ .|.||.- .+...+++|||++.+++|..
T Consensus 2 ~~~~~~l~n~~~~~Y~~---~i~iGtP-----~q~~~v~~DTGSs~~Wv~~~ 45 (323)
T 3cms_A 2 EVASVPLTNYLDSQYFG---KIYLGTP-----PQEFTVLFDTGSSDFWVPSI 45 (323)
T ss_dssp CCEEEEEEEETTTEEEE---EEEETTT-----TEEEEEEEETTCCCEEEEBT
T ss_pred CcceeeeEeccCCEEEE---EEEECCC-----CeEEEEEEeCCccceEEcCC
Confidence 444556644 344554 4677742 23457999999999999864
No 104
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=20.35 E-value=86 Score=30.82 Aligned_cols=41 Identities=27% Similarity=0.320 Sum_probs=26.8
Q ss_pred eeeecccCCceEEEE--EEecC-CCcEEEEEeecCCCceeeeCCCC
Q 013993 78 IVALNNFMDAQYFGE--VSIGT-PSQTFTVIFDTGSSNLWVPSAKC 120 (432)
Q Consensus 78 ~~~l~~~~~~~Y~~~--i~iGt-P~q~~~v~~DTGSs~~WV~~~~C 120 (432)
.+|+.+. ..|.++ |.||. ......+++|||++.+++|...+
T Consensus 307 ~~pv~~~--~~w~v~l~I~Vgg~~~~~~~aiiDSGTt~i~lP~~~~ 350 (451)
T 3qvc_A 307 YEKLNHD--LMWQVDLDVHFGNVSSKKANVILDSATSVITVPTEFF 350 (451)
T ss_dssp EEECSST--TSSEEEEEEEETTEEEEEEEEEECTTBSSEEECHHHH
T ss_pred EEEcccC--CeeEEEEEEEECCccCCCceEEEeCCCccccCCHHHH
Confidence 3566542 333333 66664 12456799999999999997543
Done!