Query 013997
Match_columns 432
No_of_seqs 148 out of 1218
Neff 8.9
Searched_HMMs 13730
Date Mon Mar 25 03:37:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013997.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/013997hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1q9ja1 c.43.1.2 (A:1-175) Pol 98.1 1.2E-05 9.1E-10 67.4 11.9 134 31-184 7-144 (175)
2 d1l5aa1 c.43.1.2 (A:1-174) Vib 97.9 1.8E-05 1.3E-09 66.3 9.3 114 59-184 32-146 (174)
3 d1q9ja2 c.43.1.2 (A:181-418) P 97.9 0.00013 9.8E-09 63.9 15.2 140 231-377 31-173 (238)
4 d1l5aa2 c.43.1.2 (A:175-424) V 94.8 0.95 6.9E-05 38.2 18.8 181 230-430 33-223 (250)
5 d3claa_ c.43.1.1 (A:) Chloramp 78.7 0.63 4.6E-05 38.9 3.4 29 156-184 181-209 (213)
6 d1q23a_ c.43.1.1 (A:) Chloramp 78.6 0.64 4.7E-05 38.9 3.4 44 140-184 163-209 (214)
7 d1b5sa_ c.43.1.1 (A:) Dihydrol 60.1 2.8 0.0002 35.4 3.4 29 156-184 207-235 (242)
8 d1dpba_ c.43.1.1 (A:) Dihydrol 56.4 3.6 0.00026 34.8 3.4 28 157-184 209-236 (243)
9 d1scza_ c.43.1.1 (A:) Dihydrol 55.2 3.9 0.00028 34.3 3.4 29 156-184 196-224 (233)
10 d1xl7a1 c.43.1.3 (A:11-392) Pe 22.7 25 0.0018 31.3 3.4 36 146-183 301-336 (382)
11 d1s3si_ d.15.1.2 (I:) p47 {Rat 22.6 8.1 0.00059 23.6 -0.1 32 139-171 15-47 (50)
12 d1nm8a1 c.43.1.3 (A:9-385) Car 21.4 35 0.0025 30.2 4.0 37 146-184 298-334 (377)
No 1
>d1q9ja1 c.43.1.2 (A:1-175) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=98.11 E-value=1.2e-05 Score=67.37 Aligned_cols=134 Identities=16% Similarity=0.143 Sum_probs=83.0
Q ss_pred eeeCCcCccccc-c--ceeEEEEecCCCCCChhHHHHHHHHHHhhhhhcccCCeEEeecCCCeEEEEecCCc-cEEEEEE
Q 013997 31 LYFLNNLDQNIA-V--IVRTCYCFKSDSKGNEDAAEVVKNALSKLLVQCYPLAGRLTISSAGKLIVNCTGEG-AVFVEAE 106 (432)
Q Consensus 31 ~~~Ls~lD~~~~-~--~~~~~~~f~~~~~~~~~~~~~L~~sL~~~l~~~p~LaGrl~~~~~G~~~i~~~~~g-v~f~~a~ 106 (432)
.-+|+..++... . ++...+-++. ..+.+.|++++..+++.+|.|-.+++.+++|.+........ ..+...+
T Consensus 7 ~r~l~~~e~~~~~~~~~~~~~~~l~g-----~ld~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~~~~~~~~~~~~~~~~d 81 (175)
T d1q9ja1 7 IRKLSHSEEVFAQYEVFTSMTIQLRG-----VIDVDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLLHSGICVID 81 (175)
T ss_dssp EEECCHHHHHHHHTTCEEEEEEEEES-----CCCHHHHHHHHHHHHHHCGGGSEEEEECTTSSEEEEECCSSSCCCEEEC
T ss_pred HHHhCHHhhhcccCceEEEEEEEEcC-----CCCHHHHHHHHHHHHHhchhheEEEEEeCCeeEEEEECCCCCccEEEEE
Confidence 345788888665 2 4444444443 37999999999999999999999999887666544432211 1111111
Q ss_pred ccccccccCCCCCCChHhhhcccccCCCCCccCCCCcEEEEEEEeecCeEEEEeecceeccchhhHHHHHHHHHHHhc
Q 013997 107 ASFGIEDIGDLTKPDPLILGKLVYEIPGAQHILQIPPLVVQVTKFKCGAFVIGMSMNHCMLDGLAAMEFMNSWGETAR 184 (432)
Q Consensus 107 ~~~~~~~l~~~~~p~~~~~~~l~~~~~~~~~~~~~Pl~~vqvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 184 (432)
.+ -.+.. ......... -..+.|+..+.+. ..+++..|.+.+||.++||.|+..|++.+.+.+.
T Consensus 82 ~~--~~~~~---------~~~~~~~~~---l~~~~~l~~~~i~-~~~~~~~l~l~~HH~i~Dg~S~~~ll~el~~~Y~ 144 (175)
T d1q9ja1 82 GT--AATNG---------SPSGNAELR---LDQSVSLLHLQLI-LREGGAELTLYLHHCMADGHHGAVLVDELFSRYT 144 (175)
T ss_dssp -----------------------CCCC---CCTTTCSEEEEEE-CCSSSCEEEEEEEGGGCCHHHHHHHHHHHHHHHH
T ss_pred cc--cchhH---------HHHhhcccC---ccCCCCeEEEEEE-ecCCeEEEEEEccccccCHhHHHHHHHHHHHHHH
Confidence 00 00000 000000000 1124566666665 4466788999999999999999999999987774
No 2
>d1l5aa1 c.43.1.2 (A:1-174) VibH {Vibrio cholerae [TaxId: 666]}
Probab=97.91 E-value=1.8e-05 Score=66.28 Aligned_cols=114 Identities=13% Similarity=0.169 Sum_probs=72.2
Q ss_pred hhHHHHHHHHHHhhhhhcccCCeEEeecCCCeEEEEecCCccEEEEEEccccccccCCCCCCChHhhhcccc-cCCCCCc
Q 013997 59 EDAAEVVKNALSKLLVQCYPLAGRLTISSAGKLIVNCTGEGAVFVEAEASFGIEDIGDLTKPDPLILGKLVY-EIPGAQH 137 (432)
Q Consensus 59 ~~~~~~L~~sL~~~l~~~p~LaGrl~~~~~G~~~i~~~~~gv~f~~a~~~~~~~~l~~~~~p~~~~~~~l~~-~~~~~~~ 137 (432)
..+.+.|++|+.++++.+|.|--++..++++ ..-.. ...+ .+.++.....+.. .....+- .....-+
T Consensus 32 ~ld~~~l~~A~~~l~~rh~~LRt~f~~~~~~-~~~~~-~~~~---------~~~~~~~~~~~~~-~~~~~~~~~~~~~~d 99 (174)
T d1l5aa1 32 PLDTTLLLRALHLTVSEIDLFRARFSAQGEL-YWHPF-SPPI---------DYQDLSIHLEAEP-LAWRQIEQDLQRSST 99 (174)
T ss_dssp SCCHHHHHHHHHHHHHTCGGGGEEECTTCCE-EECSS-CCCC---------EEEECTTCTTHHH-HHHHHHHHHHTSCCC
T ss_pred CCCHHHHHHHHHHHHHhCchheEEEeccCcE-EEEEE-eece---------eeEecccccchHH-HHHHHHHHHHhCCcc
Confidence 3689999999999999999997777654322 11111 1111 1222221111111 1111110 0000112
Q ss_pred cCCCCcEEEEEEEeecCeEEEEeecceeccchhhHHHHHHHHHHHhc
Q 013997 138 ILQIPPLVVQVTKFKCGAFVIGMSMNHCMLDGLAAMEFMNSWGETAR 184 (432)
Q Consensus 138 ~~~~Pl~~vqvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 184 (432)
....|++.+.+-+..+|...+.+.+||.++||.|+..|++.++++++
T Consensus 100 l~~~pl~r~~l~~~~~~~~~l~~~~hHii~Dg~S~~~l~~el~~~Y~ 146 (174)
T d1l5aa1 100 LIDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQ 146 (174)
T ss_dssp CBTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred ccCCCcEEEEEEEeCCCceEEeeecccEEEcHhHHHHHHHHHHHHHH
Confidence 34568998888777788899999999999999999999999998875
No 3
>d1q9ja2 c.43.1.2 (A:181-418) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.90 E-value=0.00013 Score=63.91 Aligned_cols=140 Identities=11% Similarity=0.132 Sum_probs=97.3
Q ss_pred eEEEEEEECHHHHHHHHHHHhhCCCCCccchHHHHHHHHHHHHHHHcCCCCCCceEEEEEecCCCCCCCCCCCCccccee
Q 013997 231 MLYRYFCFGPEKLEQLKQIAMQDKVLNKCTTFEALSAFVWRARCEALGMQPDQQTKLLFAVDGRSRFEPPLPEGFFGNGI 310 (432)
Q Consensus 231 ~~~~~f~~~~~~i~~Lk~~~~~~~~~~~~S~~d~l~A~lW~~i~~ar~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~ 310 (432)
.....+.++++..++|++.|++.+ +|.++++.|.+-..+.+-.+. ++....+.++++.|+++.|+...+.+||.+
T Consensus 31 ~~~~~~~ls~~~t~~l~~~~~~~~----~T~~~~l~aa~~~~l~~~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~G~~~ 105 (238)
T d1q9ja2 31 VPVTRLWLSKQQTSDLMAFGREHR----LSLNAVVAAAILLTEWQLRNT-PHVPIPYVYPVDLRFVLAPPVAPTEATNLL 105 (238)
T ss_dssp CCEEEECCCHHHHHHHHHHHTTTT----CCHHHHHHHHHHHHHHHHHTC-SSCCEEEEEEEETTTTSSSCCCTTTBSCCE
T ss_pred CceEEEEeCHHHHHHHHHHHHhcC----CcHHHHHHHHHHHHHHHHhCC-CCccccccccccccccccCccccceeEeee
Confidence 345567899999999999998865 899999999865555544332 355678899999999999888888899998
Q ss_pred eeeeecccccccccCCHHHHHHHHHHHHhh-cChHHH-HHHHHHHHhhcCC-CCCCCcEEEeccCCCCCC
Q 013997 311 VLTYSLSKAGELLTNPLSFTVGLVQNAVSM-VTDSYM-RSAIDYFEITRAR-PSLAATMLITTWYRLSFH 377 (432)
Q Consensus 311 ~~~~~~~~~~~l~~~~l~~~A~~ir~ai~~-~~~~~v-~~~~~~~~~~~~~-~~~~~~~~~tsw~~~~~~ 377 (432)
........+.. +.++.++++.+++.+.. +..+.. ...+......... +.+...+.++|...++..
T Consensus 106 ~~~~~r~~~~~--~~~~~~l~~~v~~~l~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~g~~~~~ 173 (238)
T d1q9ja2 106 GAASYLAEIGP--NTDIVDLASDIVATLRADLANGVIQQSGLHFGTAFEGTPPGLPPLVFCTDATSFPTM 173 (238)
T ss_dssp EEEEEEECCCS--SCCHHHHHHHHHHHHHHHHHHTHHHHSCCBGGGGGGCCCSSSCCCEEEECCCCCCSC
T ss_pred eeEEEEEecCC--CCCHHHHHHHHHHHHHHHHhcccccHHHHhhhhhcccCCccCCceeeeecccccccc
Confidence 88766655442 57899999999998865 322221 1111111111122 234567888988776543
No 4
>d1l5aa2 c.43.1.2 (A:175-424) VibH {Vibrio cholerae [TaxId: 666]}
Probab=94.84 E-value=0.95 Score=38.17 Aligned_cols=181 Identities=10% Similarity=0.027 Sum_probs=100.0
Q ss_pred ceEEEEEEECHHHHHHHHHHHhhCCCCCccchHHHHHHHHHHHHHHHcCCCCCCceEEEEEecCCCCCCCCCCCCcccce
Q 013997 230 EMLYRYFCFGPEKLEQLKQIAMQDKVLNKCTTFEALSAFVWRARCEALGMQPDQQTKLLFAVDGRSRFEPPLPEGFFGNG 309 (432)
Q Consensus 230 ~~~~~~f~~~~~~i~~Lk~~~~~~~~~~~~S~~d~l~A~lW~~i~~ar~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~ 309 (432)
......+.|+.+..++|++.|++.+ +|.+.++.|. |..+.+ +. . .+...+..+++.|..- --.+.+|.+
T Consensus 33 ~~~~~~~~l~~~~~~~l~~~a~~~~----~s~~~~l~aa-~~~~l~-~~-~-~~~~vig~~~~~R~~~---~~~~~~G~~ 101 (250)
T d1l5aa2 33 HAVSLSYTLNSQLNHLLLKLANANQ----IGWPDALVAL-CALYLE-SA-E-PDAPWLWLPFMNRWGS---VAANVPGLM 101 (250)
T ss_dssp CEEEEEEECCHHHHHHHHHHHHHTT----CCHHHHHHHH-HHHHHH-HH-S-TTCCEEEEEECCCTTS---GGGGSCSCC
T ss_pred CceEEEEEECHHHHHHHHHHHHhcC----CCHHHHHHHH-HHHHhh-hh-c-cceeeccceecCCCCh---hhhhCeEeE
Confidence 4556778899999999999998764 8888888886 655543 32 1 3455689999999642 234566766
Q ss_pred eeeeeecccccccccCCHHHHHHHHHHHHhhcCh-H-H-HHHHHHHHHhhcCC-CCCCCcEEEeccCCCCCCccccccCc
Q 013997 310 IVLTYSLSKAGELLTNPLSFTVGLVQNAVSMVTD-S-Y-MRSAIDYFEITRAR-PSLAATMLITTWYRLSFHTIDFGWGE 385 (432)
Q Consensus 310 ~~~~~~~~~~~~l~~~~l~~~A~~ir~ai~~~~~-~-~-v~~~~~~~~~~~~~-~~~~~~~~~tsw~~~~~~~~DFG~G~ 385 (432)
+.........+. +.++.++.+.+++++...-+ . + +.++...+...+.. +.+...+.+-. ++..+|+..
T Consensus 102 ~n~lP~r~~~~~--~~t~~~ll~~v~~~~~~~~~h~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~- 173 (250)
T d1l5aa2 102 VNSLPLLRLSAQ--QTSLGNYLKQSGQAIRSLYLHGRYRIEQIEQDQGLNAEQSYFMSPFINILP-----FESPHFADC- 173 (250)
T ss_dssp CEEEEEECCCCT--TCBHHHHHHHHHHHHHHHHHTTTSCHHHHHHHTTCCTTCCBCCCSEEEEEC-----CCCCCCTTC-
T ss_pred EeeeeEEEEeCC--CCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHhcCCCCCCCccceEEEeec-----cCccCCCCC-
Confidence 555444333331 46789999999888765321 1 1 33333333222221 12233333322 233344322
Q ss_pred ccccccc-ccCCCcEEEEeecCCCCCcEEEEE-----ecCHhHHHHHHHhh
Q 013997 386 PIFSGPV-ALPEKEVILFLSHGTQRKNINVLL-----GLPASAMKIFEQLM 430 (432)
Q Consensus 386 P~~~~~~-~~~~~g~~~ilp~~~~~gg~ev~v-----~l~~~~m~~l~~~~ 430 (432)
....... ..+..++.+.+-.. ++|++.+.+ .+.++.+++|.+.|
T Consensus 174 ~~~~~~~~~~~~~dl~l~v~~~-~~~~l~l~~~y~~~~~~~~~i~~l~~~~ 223 (250)
T d1l5aa2 174 QTELKVLASGSAEGINFTFRGS-PQHELCLDITADLASYPQSHWQSHCERF 223 (250)
T ss_dssp EEEEEEEEECCCCSEEEEEEEC-TTSCEEEEEEEETTTSCHHHHHHHHHHH
T ss_pred ceEEEeeeccceeeEEEEEEEc-CCceEEEEEEEehhhCCHHHHHHHHHHH
Confidence 1111111 11222333333222 356677777 45777888777655
No 5
>d3claa_ c.43.1.1 (A:) Chloramphenicol acetyltransferase, CAT {Escherichia coli [TaxId: 562]}
Probab=78.72 E-value=0.63 Score=38.86 Aligned_cols=29 Identities=21% Similarity=0.477 Sum_probs=26.7
Q ss_pred EEEEeecceeccchhhHHHHHHHHHHHhc
Q 013997 156 FVIGMSMNHCMLDGLAAMEFMNSWGETAR 184 (432)
Q Consensus 156 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 184 (432)
+-|++++||.+.||.-.+.|++.+.+.+.
T Consensus 181 m~lsls~dHrviDG~~aa~Fl~~lk~~le 209 (213)
T d3claa_ 181 LPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred EEEEEEecccccccHHHHHHHHHHHHHHh
Confidence 56999999999999999999999988875
No 6
>d1q23a_ c.43.1.1 (A:) Chloramphenicol acetyltransferase, CAT {Escherichia coli [TaxId: 562]}
Probab=78.60 E-value=0.64 Score=38.87 Aligned_cols=44 Identities=11% Similarity=0.251 Sum_probs=32.5
Q ss_pred CCCcEEE-EEEEeecCe--EEEEeecceeccchhhHHHHHHHHHHHhc
Q 013997 140 QIPPLVV-QVTKFKCGA--FVIGMSMNHCMLDGLAAMEFMNSWGETAR 184 (432)
Q Consensus 140 ~~Pl~~v-qvt~f~~GG--~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 184 (432)
..|.+.+ |+. -.+|. +-|++++||.+.||.-.+.|++.+.+.+.
T Consensus 163 ~vpii~~Gk~~-~~~~r~~mplsls~dHrvvDG~~~a~Fl~~lq~~le 209 (214)
T d1q23a_ 163 FAPVFTMGKYY-TQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCD 209 (214)
T ss_dssp CSCEEEECCCE-EETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eeeEEEecceE-EECCEEEEEEEEEecccccchHHHHHHHHHHHHHHh
Confidence 3565544 332 23443 46999999999999999999999988763
No 7
>d1b5sa_ c.43.1.1 (A:) Dihydrolipoamide acetyltransferase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=60.09 E-value=2.8 Score=35.45 Aligned_cols=29 Identities=24% Similarity=0.429 Sum_probs=26.6
Q ss_pred EEEEeecceeccchhhHHHHHHHHHHHhc
Q 013997 156 FVIGMSMNHCMLDGLAAMEFMNSWGETAR 184 (432)
Q Consensus 156 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 184 (432)
+-|++++.|-+.||.-+..|++.|.+...
T Consensus 207 m~lslt~DHRviDGa~aa~Fl~~l~~~lE 235 (242)
T d1b5sa_ 207 LALSLSFDHRMIDGATAQKALNHIKRLLS 235 (242)
T ss_dssp EEEEEEECTTTSCSHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEcchhChHHHHHHHHHHHHHHh
Confidence 55899999999999999999999998875
No 8
>d1dpba_ c.43.1.1 (A:) Dihydrolipoamide acetyltransferase {Azotobacter vinelandii [TaxId: 354]}
Probab=56.44 E-value=3.6 Score=34.77 Aligned_cols=28 Identities=21% Similarity=0.405 Sum_probs=26.0
Q ss_pred EEEeecceeccchhhHHHHHHHHHHHhc
Q 013997 157 VIGMSMNHCMLDGLAAMEFMNSWGETAR 184 (432)
Q Consensus 157 ~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 184 (432)
-|++++.|-+.||.....|++.|.+...
T Consensus 209 ~ltls~DHRvidGa~aa~FL~~l~~~lE 236 (243)
T d1dpba_ 209 PLSLSYDCRVINGAAAARFTKRLGDLLA 236 (243)
T ss_dssp EEEEEEETTTSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEeecccccHHHHHHHHHHHHHHHh
Confidence 4899999999999999999999998875
No 9
>d1scza_ c.43.1.1 (A:) Dihydrolipoamide succinyltransferase {Escherichia coli [TaxId: 562]}
Probab=55.22 E-value=3.9 Score=34.28 Aligned_cols=29 Identities=21% Similarity=0.448 Sum_probs=26.9
Q ss_pred EEEEeecceeccchhhHHHHHHHHHHHhc
Q 013997 156 FVIGMSMNHCMLDGLAAMEFMNSWGETAR 184 (432)
Q Consensus 156 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 184 (432)
+.|++++.|-+.||.-...|++.|.+...
T Consensus 196 ~~lsls~DHRviDGa~aa~Fl~~l~~~lE 224 (233)
T d1scza_ 196 MYLALSYDHRLIDGRESVGFLVTIKELLE 224 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEhhcchhccHHHHHHHHHHHHHHh
Confidence 67999999999999999999999998875
No 10
>d1xl7a1 c.43.1.3 (A:11-392) Peroxisomal carnitine O-octanoyltransferase, COT {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.69 E-value=25 Score=31.31 Aligned_cols=36 Identities=17% Similarity=0.354 Sum_probs=29.7
Q ss_pred EEEEEeecCeEEEEeecceeccchhhHHHHHHHHHHHh
Q 013997 146 VQVTKFKCGAFVIGMSMNHCMLDGLAAMEFMNSWGETA 183 (432)
Q Consensus 146 vqvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~ 183 (432)
+|+..+.+| ..|+.+-|+.+||..+..++....+..
T Consensus 301 ~q~IV~~nG--~~G~~~EHS~~DG~~~~~l~~~i~~~~ 336 (382)
T d1xl7a1 301 YNLISFANG--IFGCCCDHAPYDAMVMVNIAHYVDERV 336 (382)
T ss_dssp CEEEECTTS--CEEEEECSSSCCTHHHHHHHHHHHHHH
T ss_pred eeEEEeCCC--CEEEEeeCCchhHHHHHHHHHHHHHHH
Confidence 688778887 449999999999999999998766544
No 11
>d1s3si_ d.15.1.2 (I:) p47 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=22.61 E-value=8.1 Score=23.62 Aligned_cols=32 Identities=19% Similarity=0.191 Sum_probs=7.3
Q ss_pred CCCCcEEEEEEEeecCe-EEEEeecceeccchhh
Q 013997 139 LQIPPLVVQVTKFKCGA-FVIGMSMNHCMLDGLA 171 (432)
Q Consensus 139 ~~~Pl~~vqvt~f~~GG-~~l~~~~~H~v~Dg~~ 171 (432)
+..|...+|+- |.+|. ++--|-.+|.+.|-..
T Consensus 15 ~s~PtT~iQiR-L~dG~R~v~rFN~~Htv~dir~ 47 (50)
T d1s3si_ 15 EAEPTTNIQIR-LADGGRLVQKFNHSHRISDIRL 47 (50)
T ss_dssp ------------------------CCCCHHHHHH
T ss_pred CCCCceEEEEE-eCCCCEEEEEccCccCHHHHHH
Confidence 35788999995 88873 5666777888888543
No 12
>d1nm8a1 c.43.1.3 (A:9-385) Carnitine acetyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.38 E-value=35 Score=30.25 Aligned_cols=37 Identities=16% Similarity=0.247 Sum_probs=30.1
Q ss_pred EEEEEeecCeEEEEeecceeccchhhHHHHHHHHHHHhc
Q 013997 146 VQVTKFKCGAFVIGMSMNHCMLDGLAAMEFMNSWGETAR 184 (432)
Q Consensus 146 vqvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 184 (432)
+|+..+.+| ..|+.+-|+.+||..+..+++...+...
T Consensus 298 ~q~IV~~nG--~~g~~~EHS~~DG~~v~~~~~~v~~~~~ 334 (377)
T d1nm8a1 298 LQFIVAEDG--SCGLVYEHAAAEGPPIVTLLDYVIEYTK 334 (377)
T ss_dssp EEEEEETTS--CEEEEECTTSCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCC--CEEeeccCCcccHHHHHHHHHHHHHHhh
Confidence 677778887 3499999999999999999887665553
Done!