Your job contains 1 sequence.
>013999
MSSTSVREFVLKEVPDWNDEVIATARFKAFSGQRSDWEPKFQFWKNLILKIARHFSLAII
HPSQVKNEWFNRGGLTPLCFDDVLFVMYNEGDVVRSVDLVDAASGRLTQLFRKVRSLMAR
SAATPEILLKDHVILMEVLKDKADEVIKLLSESHWTSSCIITMKKFQDKCGGQDEASAVL
SFLTGRGKALYLSISKNEFTEGVKVSLSPAAVSSISSLDYDVLHLIWTVEKLQLQLDIID
RHYEMSRKSALASLHSGNKTVALRHAKQLKLTKESREKCTSLLNRVEEVLSLIENAESTK
KVSEAIQIGAQAIKKNKISVEELQLCLEELEESIDLQKQAEKVIVPSYTGIDDEDIEEEF
KKLEQEVECERPKPTVSKTGVNEPAASESAESLRVAFSTIGLNDGQATALAISDTVVPDR
SNESKHPMLESA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013999
(432 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2097998 - symbol:AT3G62080 "AT3G62080" species... 971 9.4e-98 1
ZFIN|ZDB-GENE-040426-1750 - symbol:chmp7 "CHMP family, me... 212 1.3e-14 1
UNIPROTKB|A6H704 - symbol:CHMP7 "Uncharacterized protein"... 202 1.7e-13 1
UNIPROTKB|Q8WUX9 - symbol:CHMP7 "Charged multivesicular b... 197 6.5e-13 1
UNIPROTKB|Q5R812 - symbol:CHMP7 "Charged multivesicular b... 197 6.5e-13 1
RGD|1308779 - symbol:Chmp7 "charged multivesicular body p... 196 8.4e-13 1
MGI|MGI:1913922 - symbol:Chmp7 "charged multivesicular bo... 196 8.4e-13 1
UNIPROTKB|Q5ZJB7 - symbol:CHMP7 "Charged multivesicular b... 191 3.1e-12 1
UNIPROTKB|Q7T0X5 - symbol:chmp7 "Charged multivesicular b... 189 4.5e-12 1
UNIPROTKB|Q5FW14 - symbol:chmp7 "Charged multivesicular b... 189 5.7e-12 1
UNIPROTKB|E2RBX9 - symbol:CHMP7 "Uncharacterized protein"... 175 1.9e-10 1
UNIPROTKB|G1K2Y2 - symbol:CHMP7 "Charged multivesicular b... 172 3.6e-10 1
UNIPROTKB|F1NRR9 - symbol:CHMP7 "Charged multivesicular b... 163 4.3e-09 1
DICTYBASE|DDB_G0277133 - symbol:DDB_G0277133 "SNF7 family... 125 8.4e-05 1
FB|FBgn0027565 - symbol:CG5498 species:7227 "Drosophila m... 84 0.00092 2
>TAIR|locus:2097998 [details] [associations]
symbol:AT3G62080 "AT3G62080" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=RCA] InterPro:IPR005024 Pfam:PF03357 EMBL:CP002686
GO:GO:0015031 KO:K15053 UniGene:At.1005 IPI:IPI00846212
RefSeq:NP_001078328.1 ProteinModelPortal:F4IX33 PRIDE:F4IX33
EnsemblPlants:AT3G62080.2 GeneID:825381 KEGG:ath:AT3G62080
OMA:SHWTSTC Uniprot:F4IX33
Length = 462
Score = 971 (346.9 bits), Expect = 9.4e-98, P = 9.4e-98
Identities = 205/433 (47%), Positives = 282/433 (65%)
Query: 1 MSSTSVREFVLKEVPDWNDEVIATARFKAFSGQRSDWEPKFQFWKNLILKIARHFSLAII 60
M +V+EF+ +EVPDW+DEV+A ARFKAFSGQRSDWE KFQFW++LI+K++R F L II
Sbjct: 40 MDPEAVKEFIRREVPDWDDEVVAMARFKAFSGQRSDWELKFQFWRDLIIKVSRQFGLFII 99
Query: 61 HPSQVKNEWFNRGGLTPLCFDDVLFVMYNEGDVVRSVDLVDAASGRLTQLFRKVRSLMAR 120
P QVK WF+RGG+TPLC DDV+ +M++EGDVVR DL D SGR+ +L R V++LM +
Sbjct: 100 DPVQVKKAWFDRGGMTPLCIDDVVLLMHSEGDVVRISDLDDPGSGRIARLLRTVKNLMVQ 159
Query: 121 SAATPEILLKDHVILMEVLKDKADEVIKLLSESHWTSSCIITMKKFQDKCGGQDEASAVL 180
E +L++ ++L+ +LK+KA +V+K+LSE HWTS+C++T+KKF++ C G +EASAVL
Sbjct: 160 QPVKQEEILENTLVLVPLLKEKAADVVKILSEGHWTSTCVVTLKKFRNLCNGSNEASAVL 219
Query: 181 SFLTGRGKALYLSISKNEFTEGVKXXXXXXXXXXXXXXDYDVLHLIWTVEKLQLQLDIID 240
S L+G GKA +SI++ E EGVK D D+LHL+ T EKLQ QL+++D
Sbjct: 220 SHLSGCGKAHKISINRGELIEGVKVSFSQTALPGISTLDCDILHLLRTTEKLQDQLEVMD 279
Query: 241 RHYEMSRKSALASLHSGNKTVALRHAKQLKLTKESREKCTSLLNRVEEVLSLIENAESTK 300
+ E S+KSALASL SG++ VALRHA++LK+ ESREKCTSLLNRVEEVL+ I ++ESTK
Sbjct: 280 QRCEKSKKSALASLKSGHRKVALRHARELKVVTESREKCTSLLNRVEEVLNTIADSESTK 339
Query: 301 KVSEAIQIGAQAIKKNKISVXXXXXXXXXXXXSIDLQKQAEKVIVPS-YTGIXXXXXXXX 359
VSEAI+ GA+ +K KIS +I+ QKQ EK + + Y I
Sbjct: 340 MVSEAIKTGARVMKDIKISADDVHDYLEELEETIESQKQVEKALESAPYPDIDDEDIEEE 399
Query: 360 XXXXXXXXXXXRPKPTVSKTGVNEPAASESAESLRVAFSTIGLNDGQATALAISDTVVPD 419
S++ PA S++A+SL FS + L G+ P
Sbjct: 400 LLELEMDLE--------SESSQVLPATSDTADSLTEMFSELKL--GKTKQTLEEQATEPA 449
Query: 420 RSNESKHPMLESA 432
+ +S +LE+A
Sbjct: 450 QMKDSGKKILEAA 462
>ZFIN|ZDB-GENE-040426-1750 [details] [associations]
symbol:chmp7 "CHMP family, member 7" species:7955
"Danio rerio" [GO:0015031 "protein transport" evidence=IEA]
[GO:0000815 "ESCRT III complex" evidence=ISS] [GO:0045324 "late
endosome to vacuole transport" evidence=ISS] [GO:0008565 "protein
transporter activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 ZFIN:ZDB-GENE-040426-1750
GO:GO:0008565 GO:GO:0045324 GO:GO:0000815 CTD:91782
eggNOG:NOG272120 HOGENOM:HOG000290682 HOVERGEN:HBG081151 KO:K15053
EMBL:BC059625 EMBL:BC066676 IPI:IPI00506588 RefSeq:NP_957075.1
UniGene:Dr.84727 ProteinModelPortal:Q6PBQ2 STRING:Q6PBQ2
PRIDE:Q6PBQ2 GeneID:393754 KEGG:dre:393754 InParanoid:Q6PBQ2
OrthoDB:EOG4HHP33 NextBio:20814753 Uniprot:Q6PBQ2
Length = 457
Score = 212 (79.7 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 69/313 (22%), Positives = 146/313 (46%)
Query: 15 PDWNDEVIATARFKAFSGQR----SDWEPKFQFWKNLILKIARHFSLAIIHPSQVKNEWF 70
PDW+D+ + F AF R +DW+ K FW LI++ R ++ + NE F
Sbjct: 14 PDWDDDERMSFLFSAFKENRDVDCTDWDGKIDFWSPLIIEHCRRCGSVCVNLQDL-NENF 72
Query: 71 NRGGLTPLCFDDVLFVMYNEGDVVRSVDLV-DAASGRLTQ-----LFRKVRSLMARSAAT 124
R G PL V+ M G V + D + SG L+ L R ++ ++ +
Sbjct: 73 RRKGSVPLGLSTVIQSMIRSGKVQKESDFAANVDSGWLSWGVGLLLVRPLKWTLSALLGS 132
Query: 125 PEILLKDHVILMEVLKDKADEVIKLLSESHWTSSCIITMKKFQDKCGG--QDEASAVLSF 182
+ L++ +++E++K+KA E++ S ++ +++ ++ + DE++ ++
Sbjct: 133 GRVPLEESFVVIELVKEKAAELLAAYRGSALSARSLLSFQELRSLSSHICPDESTLCMAL 192
Query: 183 LTGRGKALYLSISKNEFTEGVKXXXXXXXXXX-XXXXDYDVLHLIWTVEKLQLQLDIIDR 241
L + + ++++S +E + VK D + L + + L+ +++ +
Sbjct: 193 LQLQ-REKHVTVSLHEGEKLVKFSQAGQGRVSPVSEVDLGIYQLQCSEKLLEERVEALGH 251
Query: 242 HYEMSRKSALASLHSGNKTVALRHAKQLKLTKESREKCTSLLNRVEEVLSLIENAESTKK 301
E ++ A + L G K+ ALR + K ++ ++ + L V+ +L I N+++ +
Sbjct: 252 EAEKCKQQAKSLLKEGKKSQALRCLRGSKRVEKKADRLFAQLETVKGILDRIANSQTDRL 311
Query: 302 VSEAIQIGAQAIK 314
V +A Q G A++
Sbjct: 312 VMQAYQAGVAALR 324
>UNIPROTKB|A6H704 [details] [associations]
symbol:CHMP7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045324 "late endosome to vacuole transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000815
"ESCRT III complex" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005634 GO:GO:0008565 GO:GO:0045324 GO:GO:0000815
GeneTree:ENSGT00530000063571 CTD:91782 eggNOG:NOG272120
HOGENOM:HOG000290682 HOVERGEN:HBG081151 KO:K15053 OrthoDB:EOG4HHP33
OMA:WDDDERM EMBL:DAAA02023574 EMBL:DAAA02023571 EMBL:DAAA02023572
EMBL:DAAA02023573 EMBL:BC146064 IPI:IPI00691723
RefSeq:NP_001092589.1 UniGene:Bt.4082 STRING:A6H704
Ensembl:ENSBTAT00000017987 GeneID:541288 KEGG:bta:541288
InParanoid:A6H704 NextBio:20879119 Uniprot:A6H704
Length = 450
Score = 202 (76.2 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 74/314 (23%), Positives = 142/314 (45%)
Query: 15 PDWN-DEVIATARFKAFSGQR----SDWEPKFQFWKNLILKIARHFSLAIIHPSQVKNEW 69
P+W DE + F AF R +DW+ K FW L+L +R + + ++ E
Sbjct: 22 PEWEEDEERMSFLFSAFKRSREVNSTDWDSKMGFWAPLVLSHSRRQGVVRLRLRDLQ-EA 80
Query: 70 FNRGGLTPLCFDDVLFVMYNEGDVVRSVDL---VDAAS---GRLTQLFRKVRSLMARSAA 123
F R G PL VL + G++ R D VD++ G L + ++ ++
Sbjct: 81 FQRKGSVPLGLATVLQDLLRRGELQRESDFMASVDSSWISWGVGVFLLKPLKWTLSNMLG 140
Query: 124 TPEILLKDHVILMEVLKDKADEVIKLLSESHWTSSCIITMKKFQDKCGGQ--DEASAVLS 181
++ ++ ++ +E+LK+KA+EV +L S +S ++ + + C G DE + L
Sbjct: 141 DHKVPAEEVLVAVELLKEKAEEVYRLYQNSPLSSHPVVALSELSTLCAGSCPDERTFYLV 200
Query: 182 FLTGRGKALYLSISKNEFTEGVKXXXXXXXXXX-XXXXDYDVLHLIWTVEKLQLQLDIID 240
L + K +++ + + VK D V L+ + + L +++ +
Sbjct: 201 LLQLQ-KEKRVTVLEQNGEKIVKFARGPHAKVSPVNDVDVGVYQLMQSEQLLSRKVESLS 259
Query: 241 RHYEMSRKSALASLHSGNKTVALRHAKQLKLTKESREKCTSLLNRVEEVLSLIENAESTK 300
+ E ++ A + +G K +ALR K + T++ E + L+ V+ +L I +++ +
Sbjct: 260 QEAERYKEEARRACRAGKKQLALRSLKAKQRTEKRIEALHAKLDTVQGILDRIYASQTDQ 319
Query: 301 KVSEAIQIGAQAIK 314
V A Q G A+K
Sbjct: 320 MVFNAYQAGVGALK 333
>UNIPROTKB|Q8WUX9 [details] [associations]
symbol:CHMP7 "Charged multivesicular body protein 7"
species:9606 "Homo sapiens" [GO:0000815 "ESCRT III complex"
evidence=IDA] [GO:0045324 "late endosome to vacuole transport"
evidence=IMP] [GO:0008565 "protein transporter activity"
evidence=IMP] [GO:0005829 "cytosol" evidence=TAS] [GO:0016044
"cellular membrane organization" evidence=TAS] [GO:0016197
"endosomal transport" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
Reactome:REACT_11123 InterPro:IPR005024 Pfam:PF03357 GO:GO:0005829
GO:GO:0005634 EMBL:CH471080 GO:GO:0008565 GO:GO:0016044
GO:GO:0045324 GO:GO:0000815 CTD:91782 eggNOG:NOG272120
HOGENOM:HOG000290682 HOVERGEN:HBG081151 KO:K15053 OrthoDB:EOG4HHP33
EMBL:AK315664 EMBL:AL833843 EMBL:BC004344 EMBL:BC019110
EMBL:BC042050 IPI:IPI00395463 RefSeq:NP_689485.1 UniGene:Hs.5019
ProteinModelPortal:Q8WUX9 SMR:Q8WUX9 IntAct:Q8WUX9
MINT:MINT-1460844 STRING:Q8WUX9 PhosphoSite:Q8WUX9 DMDM:73917782
PaxDb:Q8WUX9 PRIDE:Q8WUX9 Ensembl:ENST00000313219
Ensembl:ENST00000397677 GeneID:91782 KEGG:hsa:91782 UCSC:uc003xdc.2
GeneCards:GC08P023101 HGNC:HGNC:28439 HPA:HPA036119 MIM:611130
neXtProt:NX_Q8WUX9 PharmGKB:PA142672115 InParanoid:Q8WUX9
OMA:WDDDERM GenomeRNAi:91782 NextBio:77457 ArrayExpress:Q8WUX9
Bgee:Q8WUX9 CleanEx:HS_CHMP7 Genevestigator:Q8WUX9
GermOnline:ENSG00000147457 Uniprot:Q8WUX9
Length = 453
Score = 197 (74.4 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 73/314 (23%), Positives = 141/314 (44%)
Query: 15 PDWN-DEVIATARFKAFSGQR----SDWEPKFQFWKNLILKIARHFSLAIIHPSQVKNEW 69
P+W DE + F AF R +DW+ K FW L+L +R + + ++ E
Sbjct: 22 PEWEEDEERMSFLFSAFKRSREVNSTDWDSKMGFWAPLVLSHSRRQGVVRLRLRDLQ-EA 80
Query: 70 FNRGGLTPLCFDDVLFVMYNEGDVVRSVDL---VDAAS---GRLTQLFRKVRSLMARSAA 123
F R G PL VL + G++ R D VD++ G L + ++ ++
Sbjct: 81 FQRKGSVPLGLATVLQDLLRRGELQRESDFMASVDSSWISWGVGVFLLKPLKWTLSNMLG 140
Query: 124 TPEILLKDHVILMEVLKDKADEVIKLLSESHWTSSCIITMKKFQDKCGGQ--DEASAVLS 181
++ ++ ++ +E+LK+KA+EV +L S +S ++ + + C DE + L
Sbjct: 141 DNKVPAEEVLVAVELLKEKAEEVYRLYQNSPLSSHPVVALSELSTLCANSCPDERTFYLV 200
Query: 182 FLTGRGKALYLSISKNEFTEGVKXXXXXXXXXX-XXXXDYDVLHLIWTVEKLQLQLDIID 240
L + K +++ + + VK D V L+ + + L +++ +
Sbjct: 201 LLQLQ-KEKRVTVLEQNGEKIVKFARGPRAKVSPVNDVDVGVYQLMQSEQLLSRKVESLS 259
Query: 241 RHYEMSRKSALASLHSGNKTVALRHAKQLKLTKESREKCTSLLNRVEEVLSLIENAESTK 300
+ E ++ A + +G K +ALR K + T++ E + L+ V+ +L I +++ +
Sbjct: 260 QEAERCKEEARRACRAGKKQLALRSLKAKQRTEKRIEALHAKLDTVQGILDRIYASQTDQ 319
Query: 301 KVSEAIQIGAQAIK 314
V A Q G A+K
Sbjct: 320 MVFNAYQAGVGALK 333
>UNIPROTKB|Q5R812 [details] [associations]
symbol:CHMP7 "Charged multivesicular body protein 7"
species:9601 "Pongo abelii" [GO:0000815 "ESCRT III complex"
evidence=ISS] [GO:0008565 "protein transporter activity"
evidence=ISS] [GO:0045324 "late endosome to vacuole transport"
evidence=ISS] InterPro:IPR005024 Pfam:PF03357 GO:GO:0008565
GO:GO:0045324 GO:GO:0000815 CTD:91782 HOVERGEN:HBG081151 KO:K15053
EMBL:CR859943 RefSeq:NP_001126224.1 UniGene:Pab.18869
ProteinModelPortal:Q5R812 GeneID:100173193 KEGG:pon:100173193
InParanoid:Q5R812 Uniprot:Q5R812
Length = 453
Score = 197 (74.4 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 73/314 (23%), Positives = 141/314 (44%)
Query: 15 PDWN-DEVIATARFKAFSGQR----SDWEPKFQFWKNLILKIARHFSLAIIHPSQVKNEW 69
P+W DE + F AF R +DW+ K FW L+L +R + + ++ E
Sbjct: 22 PEWEEDEERMSFLFSAFKRSREVNSTDWDSKMGFWAPLVLSHSRRQGVVRLRLRDLQ-EA 80
Query: 70 FNRGGLTPLCFDDVLFVMYNEGDVVRSVDL---VDAAS---GRLTQLFRKVRSLMARSAA 123
F R G PL VL + G++ R D VD++ G L + ++ ++
Sbjct: 81 FQRKGSVPLGLATVLQDLLRRGELQRESDFMASVDSSWISWGVGVFLLKPLKWTLSNMLG 140
Query: 124 TPEILLKDHVILMEVLKDKADEVIKLLSESHWTSSCIITMKKFQDKCGGQ--DEASAVLS 181
++ ++ ++ +E+LK+KA+EV +L S +S ++ + + C DE + L
Sbjct: 141 DNKVPAEEVLVAVELLKEKAEEVYRLYQSSPLSSHPVVALSELSTLCANSCPDERTFYLV 200
Query: 182 FLTGRGKALYLSISKNEFTEGVKXXXXXXXXXX-XXXXDYDVLHLIWTVEKLQLQLDIID 240
L + K +++ + + VK D V L+ + + L +++ +
Sbjct: 201 LLQLQ-KEKRVTVLEQNGEKIVKFARGPHAKVSPVNDVDVGVYQLMQSEQLLSRKVESLS 259
Query: 241 RHYEMSRKSALASLHSGNKTVALRHAKQLKLTKESREKCTSLLNRVEEVLSLIENAESTK 300
+ E ++ A + +G K +ALR K + T++ E + L+ V+ +L I +++ +
Sbjct: 260 QEAERCKEEARRACRAGKKQLALRSLKAKQRTEKRIEALHAKLDTVQGILDRIYASQTDQ 319
Query: 301 KVSEAIQIGAQAIK 314
V A Q G A+K
Sbjct: 320 MVFNAYQAGVGALK 333
>RGD|1308779 [details] [associations]
symbol:Chmp7 "charged multivesicular body protein 7"
species:10116 "Rattus norvegicus" [GO:0000815 "ESCRT III complex"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0008565 "protein
transporter activity" evidence=IEA;ISO] [GO:0045324 "late endosome
to vacuole transport" evidence=IEA;ISO] InterPro:IPR005024
Pfam:PF03357 RGD:1308779 GO:GO:0005634 GO:GO:0008565 GO:GO:0045324
GO:GO:0000815 GeneTree:ENSGT00530000063571 CTD:91782 KO:K15053
OrthoDB:EOG4HHP33 OMA:WDDDERM EMBL:CH473951 IPI:IPI00214613
RefSeq:NP_001102342.1 UniGene:Rn.136789 Ensembl:ENSRNOT00000023318
GeneID:364419 KEGG:rno:364419 UCSC:RGD:1308779 NextBio:685378
Uniprot:D4A7H9
Length = 450
Score = 196 (74.1 bits), Expect = 8.4e-13, P = 8.4e-13
Identities = 73/314 (23%), Positives = 141/314 (44%)
Query: 15 PDWN-DEVIATARFKAFSGQR----SDWEPKFQFWKNLILKIARHFSLAIIHPSQVKNEW 69
P+W DE + F AF R +DW+ K FW L+L +R + + ++ E
Sbjct: 22 PEWEEDEERMSFLFSAFKRSREVNSTDWDSKMGFWAPLVLSHSRRQGVVRLRLRDLQ-EA 80
Query: 70 FNRGGLTPLCFDDVLFVMYNEGDVVRSVDL---VDAAS---GRLTQLFRKVRSLMARSAA 123
F R G PL VL + G++ R D VD++ G L + ++ ++
Sbjct: 81 FQRKGSVPLGLATVLQDLLRRGELQRESDFMASVDSSWISWGVGVFLLKPLKWTLSNMLG 140
Query: 124 TPEILLKDHVILMEVLKDKADEVIKLLSESHWTSSCIITMKKFQDKCGGQ--DEASAVLS 181
++ ++ ++ +E+LK+KA+EV +L S +S ++ + + C DE + L
Sbjct: 141 DNKVPAEEVLVAVELLKEKAEEVYRLYQNSPLSSHPVVALSELSALCANSCPDERTFYLV 200
Query: 182 FLTGRGKALYLSISKNEFTEGVKXXXXXXXXXX-XXXXDYDVLHLIWTVEKLQLQLDIID 240
L + K +++ + + VK D V L+ + + L +++ +
Sbjct: 201 LLQLQ-KEKRVTVLEQNGEKIVKFARGPHAKVSPVNDVDVGVYQLMQSEQLLSQKVESLS 259
Query: 241 RHYEMSRKSALASLHSGNKTVALRHAKQLKLTKESREKCTSLLNRVEEVLSLIENAESTK 300
+ E ++ A + +G K +ALR K + T++ E + L+ V+ +L I +++ +
Sbjct: 260 QESERCKEEARRACRAGKKQLALRSLKAKQRTEKRIEALHAKLDTVQGILDRIYASQTDQ 319
Query: 301 KVSEAIQIGAQAIK 314
V A Q G A+K
Sbjct: 320 MVFNAYQAGVGALK 333
>MGI|MGI:1913922 [details] [associations]
symbol:Chmp7 "charged multivesicular body protein 7"
species:10090 "Mus musculus" [GO:0000815 "ESCRT III complex"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=ISO] [GO:0015031 "protein transport"
evidence=IEA] [GO:0045324 "late endosome to vacuole transport"
evidence=ISO] InterPro:IPR005024 Pfam:PF03357 MGI:MGI:1913922
GO:GO:0005634 GO:GO:0008565 GO:GO:0045324 GO:GO:0000815
GeneTree:ENSGT00530000063571 CTD:91782 eggNOG:NOG272120
HOGENOM:HOG000290682 HOVERGEN:HBG081151 KO:K15053 OrthoDB:EOG4HHP33
OMA:WDDDERM EMBL:BC024115 EMBL:BC033365 IPI:IPI00153445
IPI:IPI00461712 RefSeq:NP_598839.2 UniGene:Mm.159637
ProteinModelPortal:Q8R1T1 SMR:Q8R1T1 STRING:Q8R1T1
PhosphoSite:Q8R1T1 PaxDb:Q8R1T1 PRIDE:Q8R1T1
Ensembl:ENSMUST00000036381 GeneID:105513 KEGG:mmu:105513
UCSC:uc007ums.2 InParanoid:Q8R1T1 ChiTaRS:CHMP7 NextBio:357748
Bgee:Q8R1T1 CleanEx:MM_CHMP7 Genevestigator:Q8R1T1
GermOnline:ENSMUSG00000034190 Uniprot:Q8R1T1
Length = 451
Score = 196 (74.1 bits), Expect = 8.4e-13, P = 8.4e-13
Identities = 73/314 (23%), Positives = 141/314 (44%)
Query: 15 PDWN-DEVIATARFKAFSGQR----SDWEPKFQFWKNLILKIARHFSLAIIHPSQVKNEW 69
P+W DE + F AF R +DW+ K FW L+L +R + + ++ E
Sbjct: 22 PEWEEDEERMSFLFSAFKRSREVNSTDWDSKMGFWAPLVLSHSRRQGVVRLRLRDLQ-EA 80
Query: 70 FNRGGLTPLCFDDVLFVMYNEGDVVRSVDL---VDAAS---GRLTQLFRKVRSLMARSAA 123
F R G PL VL + G++ R D VD++ G L + ++ ++
Sbjct: 81 FQRKGSVPLGLATVLQDLLRRGELQRESDFMASVDSSWISWGVGVFLLKPLKWTLSNMLG 140
Query: 124 TPEILLKDHVILMEVLKDKADEVIKLLSESHWTSSCIITMKKFQDKCGGQ--DEASAVLS 181
++ ++ ++ +E+LK+KA+EV +L S +S ++ + + C DE + L
Sbjct: 141 DHKVPAEEVLVAVELLKEKAEEVYRLYQNSPLSSHPVVALSELSALCANSCPDERTFYLV 200
Query: 182 FLTGRGKALYLSISKNEFTEGVKXXXXXXXXXX-XXXXDYDVLHLIWTVEKLQLQLDIID 240
L + K +++ + + VK D V L+ + + L +++ +
Sbjct: 201 LLQLQ-KEKRVTVLEQNGEKIVKFARGPHAKVSPVNDVDVGVYQLMQSEQLLSRKVESLS 259
Query: 241 RHYEMSRKSALASLHSGNKTVALRHAKQLKLTKESREKCTSLLNRVEEVLSLIENAESTK 300
+ E ++ A + +G K +ALR K + T++ E + L+ V+ +L I +++ +
Sbjct: 260 QESERCKEEARRACRAGKKQLALRSLKAKQRTEKRIEALHAKLDTVQGILDRIYASQTDQ 319
Query: 301 KVSEAIQIGAQAIK 314
V A Q G A+K
Sbjct: 320 MVFNAYQAGVGALK 333
>UNIPROTKB|Q5ZJB7 [details] [associations]
symbol:CHMP7 "Charged multivesicular body protein 7"
species:9031 "Gallus gallus" [GO:0000815 "ESCRT III complex"
evidence=ISS] [GO:0008565 "protein transporter activity"
evidence=ISS] [GO:0045324 "late endosome to vacuole transport"
evidence=ISS] InterPro:IPR005024 Pfam:PF03357 GO:GO:0008565
GO:GO:0045324 GO:GO:0000815 EMBL:AJ720517 IPI:IPI00582132
RefSeq:NP_001006306.1 UniGene:Gga.19416 ProteinModelPortal:Q5ZJB7
STRING:Q5ZJB7 PRIDE:Q5ZJB7 GeneID:419535 KEGG:gga:419535 CTD:91782
eggNOG:NOG272120 HOGENOM:HOG000290682 HOVERGEN:HBG081151 KO:K15053
NextBio:20822577 Uniprot:Q5ZJB7
Length = 448
Score = 191 (72.3 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 76/316 (24%), Positives = 143/316 (45%)
Query: 15 PDW--NDEVIATARFKAFSGQR----SDWEPKFQFWKNLILKIARHFSLAIIHPSQVKNE 68
P+W +DE +A F AF R ++W+ K FW L+L R + +++N
Sbjct: 19 PEWETDDERMAFL-FSAFKQSREVNSTEWDSKMAFWVGLVLARGRRRGVVRTCLRELQNG 77
Query: 69 WFNRGGLTPLCFDDVLFV------MYNEGDVVRSVDLVDAASGRLTQLFRKVRSLMARSA 122
F R G PL VL M E D + SVD + G + + ++ ++
Sbjct: 78 -FERRGSVPLGLGTVLRELLRRGKMQRESDFMASVDSSWISWGVGVFILKPLKWTLSSVL 136
Query: 123 ATPEILLKDHVIL-MEVLKDKADEVIKLLSESHWTSSCIITMKKFQDKCGG--QDEASAV 179
++ ++ V++ +E+L++KA+EV +L S +S ++ + + + C G DE +
Sbjct: 137 GDSKVPEEEEVLIYVELLQEKAEEVYRLYQNSVLSSHPVVALSELRSLCAGVCPDERTFY 196
Query: 180 LSFLTGRGKALYLSISKNEFTEGVKXXXXXXXXXX-XXXXDYDVLHLIWTVEKLQLQLDI 238
L L + K ++I + + VK D V L+ + + L +++
Sbjct: 197 LLLLQLQ-KEKKVTILEQNGEKIVKFARGLHAKVSPMNDVDIGVYQLMQSEQLLSQKVES 255
Query: 239 IDRHYEMSRKSALASLHSGNKTVALRHAKQLKLTKESREKCTSLLNRVEEVLSLIENAES 298
+ + E + A ++ +G K +ALR K + T+ E+ S L+ V+ +L I +++
Sbjct: 256 LSQEAEKCKDDARSACRAGKKQLALRCLKSKRRTERRIEELHSKLDAVQGILDRIYASQT 315
Query: 299 TKKVSEAIQIGAQAIK 314
+ V A Q G A+K
Sbjct: 316 DQMVFNAYQAGVGALK 331
>UNIPROTKB|Q7T0X5 [details] [associations]
symbol:chmp7 "Charged multivesicular body protein 7"
species:8355 "Xenopus laevis" [GO:0000815 "ESCRT III complex"
evidence=ISS] [GO:0008565 "protein transporter activity"
evidence=ISS] [GO:0045324 "late endosome to vacuole transport"
evidence=ISS] InterPro:IPR005024 Pfam:PF03357 GO:GO:0008565
GO:GO:0045324 GO:GO:0000815 HOVERGEN:HBG081151 EMBL:BC055997
UniGene:Xl.19535 ProteinModelPortal:Q7T0X5 Xenbase:XB-GENE-5867909
Uniprot:Q7T0X5
Length = 422
Score = 189 (71.6 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 76/314 (24%), Positives = 134/314 (42%)
Query: 15 PDWNDEVIATARFKAFSGQRS----DWEPKFQFWKNLILKIARHFSLAIIHPSQVKNEWF 70
P+W D+ + F AF R DW+ K +FW LIL AR L I SQ++N+ F
Sbjct: 9 PEWEDDERMSFLFSAFKRTRDVNTCDWDGKMKFWIPLILTHARAQGLLSITLSQLEND-F 67
Query: 71 NRGGLTPLCFDDVLFVMYNEGDVVRSVDLVDA-ASGRLTQLFRK--VRSLM--ARSAATP 125
R G P+ V+ M +G + + D V +SG L+ R+ +R L +
Sbjct: 68 RRKGCAPMGLRTVIQEMIRQGTLRKETDFVSGVSSGWLSWGMRQLVIRPLRWTIGTMLGS 127
Query: 126 EILLKDHVILMEVLKDKADEVIKLLSESHWTSSCIITMKKFQDKCG----GQDEASAVLS 181
++ + +++ EV+K++A V++ S + S ++ ++ C + VL
Sbjct: 128 QVGPDEPLVIPEVIKERAALVLQRYQSSTFRSFPLLCEEEVHTLCAEICPNPSALNLVLL 187
Query: 182 FLTGRGKALYLSISKNEFTEGVKXXXXXXXXXXXXXXDYDVLHLIWTVEKLQLQLDIIDR 241
L G K L + + + V+ D + L + L +L
Sbjct: 188 QLQGDKKICVLERAGQKLVKFVRVSVGQVEPISES--DLGIYQLQQGEKLLSERLQSAGE 245
Query: 242 HYEMSRKSALASLHSGNKTVALRHAKQLKLTKESREKCTSLLNRVEEVLSLIENAESTKK 301
+ A +GNK ALR ++ KL + + + + ++ +L I AE+ +K
Sbjct: 246 ESNRLTEEARTYNRAGNKNQALRCLRKRKLVERRITELQNKQDNIQGILERISAAETDRK 305
Query: 302 VSEAIQIGAQAIKK 315
V A Q+G A+K+
Sbjct: 306 VVSAYQMGVSALKQ 319
>UNIPROTKB|Q5FW14 [details] [associations]
symbol:chmp7 "Charged multivesicular body protein 7"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000815 "ESCRT III
complex" evidence=ISS] [GO:0008565 "protein transporter activity"
evidence=ISS] [GO:0045324 "late endosome to vacuole transport"
evidence=ISS] InterPro:IPR005024 Pfam:PF03357 GO:GO:0008565
GO:GO:0045324 GO:GO:0000815 CTD:91782 eggNOG:NOG272120
HOGENOM:HOG000290682 HOVERGEN:HBG081151 KO:K15053 OrthoDB:EOG4HHP33
EMBL:BC089669 RefSeq:NP_001015735.1 UniGene:Str.37507
ProteinModelPortal:Q5FW14 STRING:Q5FW14 GeneID:548452
KEGG:xtr:548452 Xenbase:XB-GENE-5867894 InParanoid:Q5FW14
Uniprot:Q5FW14
Length = 468
Score = 189 (71.6 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 77/313 (24%), Positives = 139/313 (44%)
Query: 15 PDWNDEVIATARFKAFSGQR----SDWEPKFQFWKNLILKIARHFSLAIIHPSQVKNEWF 70
P+W+D+ + F AF R SDW+ K +FW LILK AR L I SQ++ + F
Sbjct: 9 PEWDDDERMSFLFSAFKQTRDVNTSDWDGKMKFWIPLILKHARAQGLLSISLSQLERD-F 67
Query: 71 NRGGLTPLCFDDVLFVMYNEGDVVRSVDLV-DAASGRLTQLFRK--VRSLM--ARSAATP 125
R G PL V+ M +G + + D V + +SG L+ R+ +R L +
Sbjct: 68 RRKGFAPLGLRIVIQEMMRQGTLRKESDYVSNVSSGWLSWGMRQLVIRPLRWTIGTVLGS 127
Query: 126 EILLKDHVILMEVLKDKADEVIKLLSESHWTSSCIITMKKFQDKCG----GQDEASAVLS 181
++ + +++ E++K++A V++ S + +++ ++ + C + VL
Sbjct: 128 QMGPDEPLVIPEIIKERAALVLQRYQSSPLRALPLLSEEEVRTLCAEICPNPSALNLVLL 187
Query: 182 FLTGRGKALYLSISKNEFTEGVKXXXXXXXXXXXXXXDYDVLHLIWTVEKLQLQLDIIDR 241
L G K L + + + V+ D + L + + L +L
Sbjct: 188 QLQGDKKICVLERAGKKLVKFVRVSVGQVDPISES--DLGIYELQQSEKLLSERLQSAGE 245
Query: 242 HYEMSRKSALASLHSGNKTVALRHAKQLKLTKESREKCTSLLNRVEEVLSLIENAESTKK 301
+ + A +GNK ALR ++ KL + + + + V+ +L I AE+ +K
Sbjct: 246 ESDRLTEEARTYNRAGNKHQALRCLRKRKLLERRITELQNKQDTVQGILERIAAAETDRK 305
Query: 302 VSEAIQIGAQAIK 314
V A Q+G A+K
Sbjct: 306 VVSAYQMGVSALK 318
>UNIPROTKB|E2RBX9 [details] [associations]
symbol:CHMP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00530000063571 OMA:WDDDERM EMBL:AAEX03014365
Ensembl:ENSCAFT00000014653 Uniprot:E2RBX9
Length = 445
Score = 175 (66.7 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 73/314 (23%), Positives = 138/314 (43%)
Query: 15 PDWN-DEVIATARFKAFSGQR----SDWEPKFQFWKNLILKIARHFSLAIIHPSQVKNEW 69
P+W DE + F AF R +DW+ K FW L+L +R + + ++ E
Sbjct: 22 PEWEEDEERMSFLFSAFKRSREVNSTDWDSKMGFWAPLVLSHSRRQGVVRLRLRDLQ-EA 80
Query: 70 FNRGGLTPLCFDDVLFVMYNEGDVVRSVDL---VDAAS---GRLTQLFRKVRSLMARSAA 123
F R G PL VL + G++ R D VD++ G L + ++ ++
Sbjct: 81 FQRKGSVPLGLATVLQDLLRRGELQRESDFMASVDSSWISWGVGVFLLKPLKWTLSNMLG 140
Query: 124 TPEILLKDHVILMEVLKDKADEVIKLLSESHWTSSCIITMKKFQDKCGGQ--DEASAVLS 181
++ ++ ++ +E+LK+KA+EV +L S +S ++ + + C G DE + L
Sbjct: 141 DNKVPAEEVLVAVELLKEKAEEVYRLYQNSPLSSHPVVALSELSTLCVGSCPDERTFYLV 200
Query: 182 FLTGRGKALYLSISKNEFTEGVKXXXXXXXXXX-XXXXDYDVLHLIWTVEKLQLQLDIID 240
L + K +++ + + VK D V L+ + + L +++ +
Sbjct: 201 LLQLQ-KEKRVTVLEQNGEKIVKFARGPHAKVSPVNDVDVGVYQLMQSEQLLSRKVESLS 259
Query: 241 RHYEMSRKSALASLHSGNKTVALRHAKQLKLTKESREKCTSLLNRVEEVLSLIENAESTK 300
+ E ++ A + +G K + LR K + TK+ + L +V +L ++ +
Sbjct: 260 QEAERCKEEARRACRAGKKQLGLRALKGQQRTKK---RIQGLHGKV--ILERNYASQKDQ 314
Query: 301 KVSEAIQIGAQAIK 314
KV A Q G A+K
Sbjct: 315 KVFNAYQAGVGALK 328
>UNIPROTKB|G1K2Y2 [details] [associations]
symbol:CHMP7 "Charged multivesicular body protein 7"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00530000063571 EMBL:AADN02055452 EMBL:AADN02055453
Ensembl:ENSGALT00000000557 Uniprot:G1K2Y2
Length = 411
Score = 172 (65.6 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 67/290 (23%), Positives = 130/290 (44%)
Query: 35 SDWEPKFQFWKNLILKIARHFSLAIIHPSQVKNEWFNRGGLTPLCFDDVLFV------MY 88
++W K FW L+L R + +++N F R G PL VL M
Sbjct: 7 TEWHYKMAFWVGLVLARGRRRGVVRTCLRELQNG-FERRGSVPLGLGTVLRELLRRGKMQ 65
Query: 89 NEGDVVRSVDLVDAASGRLTQLFRKVRSLMARSAATPEILLKDHVIL-MEVLKDKADEVI 147
E D + SVD + G + + ++ ++ ++ ++ V++ +E+L++KA+EV
Sbjct: 66 RESDFMASVDSSWISWGVGVFILKPLKWTLSSVLGDSKVPEEEEVLIYVELLQEKAEEVY 125
Query: 148 KLLSESHWTSSCIITMKKFQDKCGG--QDEASAVLSFLTGRGKALYLSISKNEFTEGVKX 205
+L S +S ++ + + + C G DE + L L + K ++I + + VK
Sbjct: 126 RLYQNSVLSSHPVVALSELRSLCAGVCPDERTFYLLLLQLQ-KEKKVTILEQNGEKIVKF 184
Query: 206 XXXXXXXXX-XXXXDYDVLHLIWTVEKLQLQLDIIDRHYEMSRKSALASLHSGNKTVALR 264
D V L+ + + L +++ + + E + A ++ +G K +ALR
Sbjct: 185 ARGLHAKVSPMNDVDIGVYQLMQSEQLLSQKVESLSQEAEKCKDDARSACRAGKKQLALR 244
Query: 265 HAKQLKLTKESREKCTSLLNRVEEVLSLIENAESTKKVSEAIQIGAQAIK 314
K + T+ E+ S L+ V+ +L I +++ + V A Q G A+K
Sbjct: 245 CLKSKRRTERRIEELHSKLDAVQGILDRIYASQTDQMVFNAYQAGVGALK 294
>UNIPROTKB|F1NRR9 [details] [associations]
symbol:CHMP7 "Charged multivesicular body protein 7"
species:9031 "Gallus gallus" [GO:0000815 "ESCRT III complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0045324 "late
endosome to vacuole transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0005634 GO:GO:0008565 GO:GO:0045324
GO:GO:0000815 GeneTree:ENSGT00530000063571 OMA:WDDDERM
EMBL:AADN02055452 EMBL:AADN02055453 IPI:IPI00823092
Ensembl:ENSGALT00000040959 Uniprot:F1NRR9
Length = 438
Score = 163 (62.4 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 67/291 (23%), Positives = 130/291 (44%)
Query: 35 SDWEPKFQFWKNLILKIARHFSLAIIHPSQVKNEWFNRGGLTPLCFDDVLFV------MY 88
++W K FW L+L R + +++N F R G PL VL M
Sbjct: 33 TEWHYKMAFWVGLVLARGRRRGVVRTCLRELQNG-FERRGSVPLGLGTVLRELLRRGKMQ 91
Query: 89 NEGDVVRSVDLVDAASGRLTQLFRKVRSLMARSAATPEILLKDHVIL-MEVLKDKADEVI 147
E D + SVD + G + + ++ ++ ++ ++ V++ +E+L++KA+EV
Sbjct: 92 RESDFMASVDSSWISWGVGVFILKPLKWTLSSVLGDSKVPEEEEVLIYVELLQEKAEEVY 151
Query: 148 KLLSESHWTSSCIITMKKFQDKCGG--QDEASAVLSFLTGRGKALYLSISKNEFTEGVKX 205
+L S +S ++ + + + C G DE + L L + K ++I + + VK
Sbjct: 152 RLYQNSVLSSHPVVALSELRSLCAGVCPDERTFYLLLLQLQ-KEKKVTILEQNGEKIVKF 210
Query: 206 XXXXXXXXX-XXXXDYDVLHLIWTVEKLQLQLDIIDRHYEMSRKSALASLHSGNKTVALR 264
D V L+ + + L +++ + + E + A ++ +G K +ALR
Sbjct: 211 ARGLHAKVSPMNDVDIGVYQLMQSEQLLSQKVESLSQEAEKCKDDARSACRAGKKQLALR 270
Query: 265 HAKQLKLTKESREKCTSLLNRVEEVLSLIENAESTKKVS-EAIQIGAQAIK 314
K + T+ E+ S L+ V+ +L I +++ + V A Q G A+K
Sbjct: 271 CLKSKRRTERRIEELHSKLDAVQGILDRIYASQTDQMVVFNAYQAGVGALK 321
>DICTYBASE|DDB_G0277133 [details] [associations]
symbol:DDB_G0277133 "SNF7 family protein"
species:44689 "Dictyostelium discoideum" [GO:0015031 "protein
transport" evidence=IEA] [GO:0045324 "late endosome to vacuole
transport" evidence=ISS] [GO:0008565 "protein transporter activity"
evidence=ISS] [GO:0000815 "ESCRT III complex" evidence=ISS]
[GO:0006810 "transport" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357
dictyBase:DDB_G0277133 GO:GO:0008565 GenomeReviews:CM000151_GR
EMBL:AAFI02000019 GO:GO:0045324 GO:GO:0000815 eggNOG:NOG272120
KO:K15053 RefSeq:XP_642803.1 ProteinModelPortal:Q86K93 PRIDE:Q86K93
EnsemblProtists:DDB0266400 GeneID:8620866 KEGG:ddi:DDB_G0277133
OMA:MAKTYLR ProtClustDB:CLSZ2729144 Uniprot:Q86K93
Length = 477
Score = 125 (49.1 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 59/247 (23%), Positives = 105/247 (42%)
Query: 123 ATPEILLKDHV--ILMEVLKDKADEVIK-LLSESHWTSSCIITM----KKFQDKCGGQDE 175
+TP + +V IL E++KDKA+++ + L + T+ II+ K +D ++E
Sbjct: 135 STPNTETEKNVKFILPEMIKDKAEQLYQHQLKNMNSTTDNIISYINLEKSIKDWYITREE 194
Query: 176 ASAVLSFLTGRGKALYLS------ISKNEFTE---GVKXXXXXXXXXXXXXXDYDVLHLI 226
+L L K L L+ I+ N E G+K D+ +L L
Sbjct: 195 LDLLLLVLFRDSKVLILTNNKIKNINNNNNGEDRIGIKFAFDGEKVQPIQETDFGILKLQ 254
Query: 227 WTVEKLQLQLDIIDRHYEMSRKSALASLHSGNKTVALRHAKQLKLTKESREKCTSLLNRV 286
T E L+ Q + E + S+ K AL K+ KL + EK + +
Sbjct: 255 TTYETLKQQESKLLTDIEEISNTIKESIRIKQKNHALLQLKKKKLLESILEKRATASTNI 314
Query: 287 EEVLSLIENAESTKKVSEAIQIGAQAIKK--NKISVXXXXXXXXXXXXSIDLQKQAEKVI 344
E+L IE+A+S +++ E++ G +KK +ISV +I Q++ + +
Sbjct: 315 HEILFSIESAKSNQQIIESLCTGVSTLKKVNQEISVDQVDSILDDYQDAITNQREIDDAM 374
Query: 345 VPSYTGI 351
+ +
Sbjct: 375 KSGFNSV 381
>FB|FBgn0027565 [details] [associations]
symbol:CG5498 species:7227 "Drosophila melanogaster"
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 EMBL:AE014296 GO:GO:0015031
GeneTree:ENSGT00530000063571 eggNOG:NOG272120 KO:K15053 OMA:MAKTYLR
EMBL:AF145648 RefSeq:NP_730525.2 UniGene:Dm.3150
EnsemblMetazoa:FBtr0078238 GeneID:40250 KEGG:dme:Dmel_CG5498
UCSC:CG5498-RB FlyBase:FBgn0027565 InParanoid:Q9Y124
OrthoDB:EOG41C5BS GenomeRNAi:40250 NextBio:817794 Uniprot:Q9Y124
Length = 448
Score = 84 (34.6 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 21/97 (21%), Positives = 52/97 (53%)
Query: 219 DYDVLHLIWTVEKLQLQLDIIDRHYEMSRKSALASLHSGNKTVALRHAKQLKLTKESREK 278
D V +L T +L QL+ ++ +++ + + +A + ++ L +++ E+
Sbjct: 243 DQAVHNLQNTQAQLLKQLEDLEEEIKVNDDKVRQYMKENKRQMAKTYLRKRHLLEKNHER 302
Query: 279 CTSLLNRVEEVLSLIENAESTKKVSEAIQIGAQAIKK 315
+ L+ +E +LS ++ A+++ V +A +IG+ +KK
Sbjct: 303 RSLALHNIESLLSSVDEAQNSGVVLDAYKIGSNTLKK 339
Score = 75 (31.5 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 41/160 (25%), Positives = 64/160 (40%)
Query: 17 WNDEVIATARFKAFSGQRSD---WEPKFQFWKNLILKIARHFSLAIIHPSQVKNEWFNRG 73
W D +F F + D ++ K FW +LI K + FS I + F RG
Sbjct: 21 WQDNGRMQVQFAMFRSRHLDAEGYDAKMNFWMDLIAKYLK-FSGRPIFSLRDLQLLFMRG 79
Query: 74 GLTPLCFDDVLFVMYNEGDV-VRSVDLVDAASGRLTQLFRKVRSLMARSAATPEILLKDH 132
P C D V+ M + RS D A+ L V SL+ R + +K H
Sbjct: 80 DQLPACLDTVISEMQQRKQIRSRSEFEYDPANSWGGWL---VNSLVKRPLSWSWSKIK-H 135
Query: 133 VILMEVLKDKADEVIKLLSESHWTSSC-IITMKKFQDKCG 171
++ E L+ A +I+ + ++C +I K + G
Sbjct: 136 SVVTEDLE--ASALIEWIHLDALNNTCDLIAEKVLSENTG 173
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.130 0.364 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 432 387 0.00093 117 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 614 (65 KB)
Total size of DFA: 234 KB (2127 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.10u 0.13s 29.23t Elapsed: 00:00:01
Total cpu time: 29.11u 0.13s 29.24t Elapsed: 00:00:01
Start: Thu May 9 17:03:13 2013 End: Thu May 9 17:03:14 2013