Query 014004
Match_columns 432
No_of_seqs 133 out of 156
Neff 3.4
Searched_HMMs 29240
Date Mon Mar 25 03:45:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014004.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014004hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qg8_A Protein (spore coat pol 84.2 1.9 6.4E-05 37.6 6.2 119 183-324 87-215 (255)
2 1xhb_A Polypeptide N-acetylgal 82.6 1.4 4.8E-05 43.0 5.3 139 183-327 113-262 (472)
3 2z86_A Chondroitin synthase; G 80.7 4.3 0.00015 41.0 8.2 216 107-327 92-334 (625)
4 2ffu_A Ppgalnact-2, polypeptid 78.1 2.8 9.5E-05 41.6 5.7 208 107-326 65-293 (501)
5 2d7i_A Polypeptide N-acetylgal 65.2 17 0.00057 37.1 8.1 211 107-327 111-342 (570)
6 3f1y_A Mannosyl-3-phosphoglyce 61.1 9.6 0.00033 37.6 5.3 200 107-327 93-313 (387)
7 3bcv_A Putative glycosyltransf 59.8 6 0.00021 33.9 3.2 109 107-220 4-120 (240)
8 4fix_A UDP-galactofuranosyl tr 45.6 15 0.00052 38.8 4.1 37 184-220 268-305 (657)
9 2bo4_A Mannosylglycerate synth 32.7 43 0.0015 33.4 4.8 182 110-316 2-210 (397)
10 2z86_A Chondroitin synthase; G 30.9 53 0.0018 33.1 5.2 108 107-219 374-490 (625)
11 2c0n_A A197; thermophil protei 27.5 20 0.00068 33.8 1.3 31 183-217 52-85 (203)
12 4hg6_A Cellulose synthase subu 24.6 73 0.0025 34.1 5.1 126 183-323 237-368 (802)
13 2nxv_A ATP synthase subunits r 22.3 51 0.0017 29.5 2.9 29 183-211 73-101 (249)
14 1omz_A Alpha-1,4-N-acetylhexos 20.7 45 0.0015 32.6 2.3 103 108-212 28-134 (293)
No 1
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=84.16 E-value=1.9 Score=37.58 Aligned_cols=119 Identities=8% Similarity=-0.073 Sum_probs=67.8
Q ss_pred ccccEEEEecccccCCCCCHHHHHHHHHHh-CCcccCCCC-----CCCCCcccccccccccCcccceeeecccCCCCCCC
Q 014004 183 AEYNYIFLWDEDIGVENFNPRRYLSIVKDE-GLEISQPAL-----DPVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDD 256 (432)
Q Consensus 183 a~YDYIFLwDDDL~Vd~f~i~ryf~Ivr~~-gLeISQPAL-----d~~s~~isH~iT~R~~~~~vHrr~~~~~g~~~C~~ 256 (432)
+..|||++.|+|..++...++++++.+++. +..+..+.. +.+ +...+.. . .+...+. .
T Consensus 87 a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~-~-~~~~~~~----------~--- 150 (255)
T 1qg8_A 87 AEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNEN-RDIVKET-V-RPAAQVT----------W--- 150 (255)
T ss_dssp CCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC----CEEEEE-E-ECCCSCB----------S---
T ss_pred cCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCC-Ccchhhc-c-CchHHHH----------H---
Confidence 688999999999999998899999999876 666665543 221 1111110 0 0000000 0
Q ss_pred CCCCCCccceEEeecccccHHHHHHhh-hh--hcC-CCcccchhhhhhhhhhcCCCCCcEEEEeeeeEEEec
Q 014004 257 YSTAPPCIGWVEMMAPVFSRAAWRCAW-YM--IQN-DLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLG 324 (432)
Q Consensus 257 ~~~~ppcTgFVEiMAPVFSR~AwrCvw-hm--iQN-DLvhGWGLDf~w~~caqg~~~~kIGVVDa~~VvH~g 324 (432)
....++-..+=+|+|++++.+- .+ ..+ +.....+-|+.+...+.. .+ ++..++...+.|+.
T Consensus 151 -----~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~-~g-~~~~~~~~~~~~r~ 215 (255)
T 1qg8_A 151 -----NAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNH-FY-PFYPLDEELDLNYI 215 (255)
T ss_dssp -----CCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTT-TC-CBEEEEEEEEEEEE
T ss_pred -----hhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHH-hC-CEEEecCcEEEEEE
Confidence 0111222234578999998763 11 011 222335567776544432 23 69999998888873
No 2
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=82.61 E-value=1.4 Score=43.04 Aligned_cols=139 Identities=14% Similarity=0.068 Sum_probs=71.3
Q ss_pred ccccEEEEecccccCCCCCHHHHHHHHHHhCCcccCCCCC---CCCCccccc----ccccccCcccceeeecccC---CC
Q 014004 183 AEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALD---PVKSEVHHP----ITARRRNSKAHRRMYKYKG---SG 252 (432)
Q Consensus 183 a~YDYIFLwDDDL~Vd~f~i~ryf~Ivr~~gLeISQPALd---~~s~~isH~----iT~R~~~~~vHrr~~~~~g---~~ 252 (432)
+..|||++.|+|..++..-++++++.+++..-.+..|.++ .+. +.+. .+...-....+........ ..
T Consensus 113 A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (472)
T 1xhb_A 113 SRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDT--FEYMAGSDMTYGGFNWKLNFRWYPVPQREMDR 190 (472)
T ss_dssp CCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSS--CCEECCCTTEEEEECTTCCEEEEECCHHHHHH
T ss_pred ccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeeeeeEcCCC--ceeccCCCcccceeeccceeecccCCHHHHhc
Confidence 6789999999999999999999999998876555556542 111 1110 0000000000000000000 00
Q ss_pred CCCCCCCCCCccceEEeecccccHHHHHHhhhhhcCCCcccch-hhhhhhhhhcCCCCCcEEEEeeeeEEEecccc
Q 014004 253 RCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWG-LDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPT 327 (432)
Q Consensus 253 ~C~~~~~~ppcTgFVEiMAPVFSR~AwrCvwhmiQNDLvhGWG-LDf~w~~caqg~~~~kIGVVDa~~VvH~g~Pt 327 (432)
+- .....+-.+.++-..+=+|+|++|+.+= -+++....|| =|+-+..-+. ..+.+|.++....|.|..+.+
T Consensus 191 ~~-~~~~~~~~~~~~~g~~~~irr~~~~~iG--gfde~~~~~g~ED~dl~~R~~-~~G~~i~~~p~~~v~H~~~~~ 262 (472)
T 1xhb_A 191 RK-GDRTLPVRTPTMAGGLFSIDRDYFQEIG--TYDAGMDIWGGENLEISFRIW-QCGGTLEIVTCSHVGHVFRKA 262 (472)
T ss_dssp TT-TCTTSCEECSBCCSSSEEEEHHHHHHTT--SCCTTSCTTCCCCSHHHHHHH-HTTCEEEEEEEEEEEEEC---
T ss_pred cc-CCCCCcccCccccceeEEEEHHHHHHcC--CCCCcccccCchhHHHHHHHH-hcCCeEEEccCcEEEEEccCc
Confidence 00 0001111111221222357999999874 2455556674 3444432222 134689999999999986654
No 3
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=80.70 E-value=4.3 Score=41.02 Aligned_cols=216 Identities=13% Similarity=0.129 Sum_probs=101.4
Q ss_pred CCCcEEEEEeccccccchhHHhhcC----CCCCcEEEEEEecCccCccccc--cccC-ceeEEEeecccchhhhccccCc
Q 014004 107 PPMNLLAIAAGIKQKKIVDQIVRKF----PSKDFVVMLFHYDGVVDEWKDL--VWAD-RAIHVSAANQTKWWFAKRFLHP 179 (432)
Q Consensus 107 ~~k~Lla~~VG~kqk~~Vd~~VkKf----~~~nFdvmLFHYDG~vd~W~d~--eWs~-~aiHVsa~kQtKWwfaKRFLHP 179 (432)
.++.-|++|+=.. ...+...++.. ...++.|++.- ||..|+=.++ ++.+ .-+++........-.+.....-
T Consensus 92 ~p~vsviIp~~n~-~~~l~~~l~sl~~q~~~~~~eiivvD-d~s~d~t~~~~~~~~~~~~i~~i~~~~~~~g~~~a~N~g 169 (625)
T 2z86_A 92 IDGLSIVIPTYNR-AKILAITLACLCNQKTIYDYEVIVAD-DGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLG 169 (625)
T ss_dssp CCCEEEEEEESSC-HHHHHHHHHHHHTCCCSSCEEEEEEE-ESCSSCHHHHHHTTTTTSCEEEEEECCCSCCHHHHHHHH
T ss_pred CCcEEEEEecCCc-HHHHHHHHHHHHhhccCCCeEEEEEe-CCCchhHHHHHHHhhhcCCeEEEEeCCCCcchhHHHHHH
Confidence 3556677776433 34444444432 22377877765 7776653321 1111 1233333322111111110011
Q ss_pred cccccccEEEEecccccCCCCCHHHHHHHHHHhC-CcccCCCCCCCCCccccc------ccccc-cC----cccceeeec
Q 014004 180 DIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEG-LEISQPALDPVKSEVHHP------ITARR-RN----SKAHRRMYK 247 (432)
Q Consensus 180 DiVa~YDYIFLwDDDL~Vd~f~i~ryf~Ivr~~g-LeISQPALd~~s~~isH~------iT~R~-~~----~~vHrr~~~ 247 (432)
=-.+..|||++.|+|..++...+.++++.+.+.. ..+.+|..-.+.....+. -..+. +. ..+......
T Consensus 170 ~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (625)
T 2z86_A 170 LRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQ 249 (625)
T ss_dssp HHHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC-------------
T ss_pred HHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhhhhcc
Confidence 1136899999999999999999999999998643 444444321111000000 00000 00 000000000
Q ss_pred ccCCCC------C-CCCCCCCCccceEEeecccccHHHHHHhhhhhcCCCcccch-hhhhhhhhhcCCCCCcEEEEeeee
Q 014004 248 YKGSGR------C-DDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWG-LDIQLGYCAQGDRTKNVGVVDSEY 319 (432)
Q Consensus 248 ~~g~~~------C-~~~~~~ppcTgFVEiMAPVFSR~AwrCvwhmiQNDLvhGWG-LDf~w~~caqg~~~~kIGVVDa~~ 319 (432)
..+..+ . ......+.-..++=..+=+|+|++|+.+= -++.....|| =|+-+..-+. ..+.++..++...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iG--gfde~~~~~g~ED~dl~~Rl~-~~G~~i~~~p~~~ 326 (625)
T 2z86_A 250 NKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAG--WFDEEFTHWGGEDNEFGYRLY-REGCYFRSVEGAM 326 (625)
T ss_dssp --CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHC--CCCTTCSSCCCHHHHHHHHHH-HTTCEEEECGGGC
T ss_pred CCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhC--CCccccccCCcchhhhhhhHH-hCCceEEEcccch
Confidence 000000 0 00000011112333445578999999873 2455556674 6666643332 1356999999999
Q ss_pred EEEecccc
Q 014004 320 IVHLGLPT 327 (432)
Q Consensus 320 VvH~g~Pt 327 (432)
+.|...+.
T Consensus 327 v~H~~~~~ 334 (625)
T 2z86_A 327 AYHQEPPG 334 (625)
T ss_dssp EEEECCC-
T ss_pred hhccCCcc
Confidence 99994443
No 4
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=78.06 E-value=2.8 Score=41.56 Aligned_cols=208 Identities=12% Similarity=0.090 Sum_probs=101.4
Q ss_pred CCCcEEEEEeccccc----cchhHHhhcCCCCC--cEEEEEEecCccCccc--cccccCceeEEEee--cccchhhhccc
Q 014004 107 PPMNLLAIAAGIKQK----KIVDQIVRKFPSKD--FVVMLFHYDGVVDEWK--DLVWADRAIHVSAA--NQTKWWFAKRF 176 (432)
Q Consensus 107 ~~k~Lla~~VG~kqk----~~Vd~~VkKf~~~n--FdvmLFHYDG~vd~W~--d~eWs~~aiHVsa~--kQtKWwfaKRF 176 (432)
.++.-|++|+=.... ..++++++.-. .+ +.|++. =||+.|+=- .++-. .-+++... +..+ +...
T Consensus 65 ~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~-~~~~~EIIvV-DDgS~D~t~~~~~~~~-~~v~vi~~~~n~G~---~~A~ 138 (501)
T 2ffu_A 65 LPATSVVITFHNEARSALLRTVVSVLKKSP-PHLIKEIILV-DDYSNDPEDGALLGKI-EKVRVLRNDRREGL---MRSR 138 (501)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHHHHSC-GGGEEEEEEE-ECSCSCTHHHHGGGGB-TTEEEEECSSCCHH---HHHH
T ss_pred CCCEEEEEEeCcCcHHHHHHHHHHHHhhCc-hhhceeEEEE-ECCCCchHHHHHHhcC-CCEEEEECCCCcCH---HHHH
Confidence 445667777744433 23555555432 33 465554 477766421 12111 12333221 1221 1111
Q ss_pred cCccccccccEEEEecccccCCCCCHHHHHHHHHHhCCcccCCCCC---CCCCccccccccc--ccCc--ccc-eeeecc
Q 014004 177 LHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALD---PVKSEVHHPITAR--RRNS--KAH-RRMYKY 248 (432)
Q Consensus 177 LHPDiVa~YDYIFLwDDDL~Vd~f~i~ryf~Ivr~~gLeISQPALd---~~s~~isH~iT~R--~~~~--~vH-rr~~~~ 248 (432)
..-=-.+..|||++.|+|..++...++++++.+++..-.+..|.++ .+. +.+.-... .... ..+ +..+..
T Consensus 139 N~G~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (501)
T 2ffu_A 139 VRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDN--FQYVGASADLKGGFDWNLVFKWDYMT 216 (501)
T ss_dssp HHHHHHCCSSEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECTTT--CCEECBCSSEEEEECTTCCEEEEECC
T ss_pred HHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeeeccCcCCC--ceeecCCcccceEeeecCCCccccCC
Confidence 1111236789999999999999999999999999887777777642 211 11100000 0000 000 000000
Q ss_pred cC--CCCCCCCCCCCCccceEEeecccccHHHHHHhhhhhcCCCcccc-hhhhhhhhhhcCCCCCcEEEEeeeeEEEecc
Q 014004 249 KG--SGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAW-GLDIQLGYCAQGDRTKNVGVVDSEYIVHLGL 325 (432)
Q Consensus 249 ~g--~~~C~~~~~~ppcTgFVEiMAPVFSR~AwrCvwhmiQNDLvhGW-GLDf~w~~caqg~~~~kIGVVDa~~VvH~g~ 325 (432)
.. ..+- .....|-.+.++-.-+=+|+|+++..+= -+++....| |=|+-+..-+. ..+.+|.++....|.|..+
T Consensus 217 ~~~~~~~~-~~~~~~~~~~~~~g~~~~irr~~~~~iG--gfde~~~~~g~ED~dl~~Rl~-~~G~~i~~~p~~~v~H~~r 292 (501)
T 2ffu_A 217 PEQRRSRQ-GNPVAPIKTPMIAGGLFVMDKFYFEELG--KYDMMMDVWGGENLEISFRVW-QCGGSLEIIPCSRVGHVFR 292 (501)
T ss_dssp HHHHHHTS-SCTTSCEECSSCCSSSEEEEHHHHHHTT--CCCTTCCSSSSHHHHHHHHHH-HTTCEEEEEEEEEEEECCC
T ss_pred HHHHhhcc-CCCCCcccCccccceEEEEEHHHHHHhC--CCCccccccCcchHHHHHHHH-hcCCeEEEccCcEEEEEcc
Confidence 00 0000 0001111111111222378899998874 245556677 45555532222 1346899999999999744
Q ss_pred c
Q 014004 326 P 326 (432)
Q Consensus 326 P 326 (432)
.
T Consensus 293 ~ 293 (501)
T 2ffu_A 293 K 293 (501)
T ss_dssp S
T ss_pred C
Confidence 3
No 5
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=65.17 E-value=17 Score=37.13 Aligned_cols=211 Identities=11% Similarity=0.036 Sum_probs=102.1
Q ss_pred CCCcEEEEEecccc----ccchhHHhhcCCCCCc--EEEEEEecCccCcc-cc-cc-cc--CceeEEEee--cccchhhh
Q 014004 107 PPMNLLAIAAGIKQ----KKIVDQIVRKFPSKDF--VVMLFHYDGVVDEW-KD-LV-WA--DRAIHVSAA--NQTKWWFA 173 (432)
Q Consensus 107 ~~k~Lla~~VG~kq----k~~Vd~~VkKf~~~nF--dvmLFHYDG~vd~W-~d-~e-Ws--~~aiHVsa~--kQtKWwfa 173 (432)
.++.-|++|+=... ...++++++.- ..++ .|++. =||+.|+- .+ ++ +. ..-|++... +..+ +
T Consensus 111 ~P~vSVIIp~yNe~~~~L~~~L~Sll~qt-~~~~~~EIIVV-DDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n~G~---~ 185 (570)
T 2d7i_A 111 LPNTSIIIPFHNEGWSSLLRTVHSVLNRS-PPELVAEIVLV-DDFSDREHLKKPLEDYMALFPSVRILRTKKREGL---I 185 (570)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHHHHS-CGGGEEEEEEE-ECSCCCGGGTHHHHHHHTTSTTEEEEECSSCCCH---H
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHhcC-CccCcEEEEEE-ECCCCcHHHHHHHHHHHHhCCeEEEEECCCCCCH---H
Confidence 45677778775543 22345555542 2343 55554 57777654 22 11 11 112444332 2221 1
Q ss_pred ccccCccccccccEEEEecccccCCCCCHHHHHHHHHHhCCcccCCCCCCCCC-ccccccc----cccc-Ccccc-eeee
Q 014004 174 KRFLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKS-EVHHPIT----ARRR-NSKAH-RRMY 246 (432)
Q Consensus 174 KRFLHPDiVa~YDYIFLwDDDL~Vd~f~i~ryf~Ivr~~gLeISQPALd~~s~-~isH~iT----~R~~-~~~vH-rr~~ 246 (432)
.-...-=-.+.-|||++.|+|..++...++++++.+++..-.+..|.++.-.. .+.+... .+.. ...+. ++..
T Consensus 186 ~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (570)
T 2d7i_A 186 RTRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIP 265 (570)
T ss_dssp HHHHHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEEC
T ss_pred HHHHHHHHhcCCCEEEEEcCCccccccHHHHHHHHHHhCCCEEEeeeeeccCCCchhhccccCCcccccccccccccccc
Confidence 11111111367899999999999999999999999987654444454321000 0111100 0000 00000 0000
Q ss_pred cccCCCCCCCCCCCCCccceEEeecccccHHHHHHhhhhhcCCCcccc-hhhhhhhhhhcCCCCCcEEEEeeeeEEEecc
Q 014004 247 KYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAW-GLDIQLGYCAQGDRTKNVGVVDSEYIVHLGL 325 (432)
Q Consensus 247 ~~~g~~~C~~~~~~ppcTgFVEiMAPVFSR~AwrCvwhmiQNDLvhGW-GLDf~w~~caqg~~~~kIGVVDa~~VvH~g~ 325 (432)
......- .....|--+.++-.-+=+|+|++|+.+= -+++....| |=|+-+..-+. ..+.+|.++....|.|..+
T Consensus 266 -~~~~~~~-~~~~~~~~~~~~~g~~~~irr~~~~~iG--gfDe~~~~~g~ED~dl~~Rl~-~~G~~i~~~p~~~v~H~~r 340 (570)
T 2d7i_A 266 -IPPELQK-ADPSDPFESPVMAGGLFAVDRKWFWELG--GYDPGLEIWGGEQYEISFKVW-MCGGRMEDIPCSRVGHIYR 340 (570)
T ss_dssp -CCTTTCC-SSTTSCEECSSCCSSSEEEEHHHHHHTT--SSCTTCCSSSSHHHHHHHHHH-HTTCEEEEEEEEEEEECCC
T ss_pred -cchhhhc-cCCCcceecccccceEEEEEHHHHHhcC--CCCCcccccCcchHHHHHHHH-hCCCeEEEccCeEEEEEcc
Confidence 0000000 0001111112222223468899999873 246666777 44555543332 1346999999999999755
Q ss_pred cc
Q 014004 326 PT 327 (432)
Q Consensus 326 Pt 327 (432)
..
T Consensus 341 ~~ 342 (570)
T 2d7i_A 341 KY 342 (570)
T ss_dssp SS
T ss_pred cc
Confidence 44
No 6
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=61.10 E-value=9.6 Score=37.60 Aligned_cols=200 Identities=10% Similarity=-0.006 Sum_probs=101.7
Q ss_pred CCCcEEEEEeccccccchhHHhhcCC------CCCcEEEEEEecCccCccccc--cccCceeEEE------eecccchhh
Q 014004 107 PPMNLLAIAAGIKQKKIVDQIVRKFP------SKDFVVMLFHYDGVVDEWKDL--VWADRAIHVS------AANQTKWWF 172 (432)
Q Consensus 107 ~~k~Lla~~VG~kqk~~Vd~~VkKf~------~~nFdvmLFHYDG~vd~W~d~--eWs~~aiHVs------a~kQtKWwf 172 (432)
.++..|++|+=+. .+++..+|+... ..+|.|++. =||+.|+=.+. ++..+.++.. ..++.|-.-
T Consensus 93 ~p~vSVVIP~yNe-~~~l~~~l~sl~~~l~~~~~~~EIIVV-DDgStD~T~~i~~~~~~~v~~~~~~~i~~~~n~G~g~A 170 (387)
T 3f1y_A 93 GLTVSAVLPSRNV-ADTVGGIIDEIHALNERAPLIDQILVV-DADSEDGTAGVAASHGAEVYSENELMSGYGDAHGKGDA 170 (387)
T ss_dssp TCCEEEEEEESSC-TTTHHHHHHHHHHHHHHSCCCSEEEEE-ECSCSSSHHHHHHHTTCEEEEGGGTTGGGCSCCSHHHH
T ss_pred CCeEEEEEEcCCC-HHHHHHHHHHHHHHHhcCCCCeEEEEE-cCcCCccHHHHHHHhCchhcccceeEecCCccCCHHHH
Confidence 4677888888554 456655555432 246776655 48887764432 1222222210 013333111
Q ss_pred hccccCccccccccEEEEeccccc-CCCCCHHHHHHHHHHh-CCcccCCCCCCCCCcccccccccccCcccce----eee
Q 014004 173 AKRFLHPDIVAEYNYIFLWDEDIG-VENFNPRRYLSIVKDE-GLEISQPALDPVKSEVHHPITARRRNSKAHR----RMY 246 (432)
Q Consensus 173 aKRFLHPDiVa~YDYIFLwDDDL~-Vd~f~i~ryf~Ivr~~-gLeISQPALd~~s~~isH~iT~R~~~~~vHr----r~~ 246 (432)
.+.=+ -.+.+|||++.|.|.. ++...+.++++.+.+. +..+.......... ...... +.....+-+ ..+
T Consensus 171 ~n~G~---~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~-~~~~~~-~~~~g~v~~~~~~~l~ 245 (387)
T 3f1y_A 171 MWRAL---SVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFR-KGESIE-EDGGGRVTELTAKPLF 245 (387)
T ss_dssp HHHHT---TTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC--------C-CBCCSHHHHHTHHHHH
T ss_pred HHHHH---HhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccccc-cccccc-cccCCchhhhhHHHHH
Confidence 11101 1268999999999999 8999999999988765 56666554321100 000000 000000000 000
Q ss_pred cccCCCCCCCCCCCCCccceEEeecccccHHHHHHhhhhhcCCCcccchhhhhhh-hhhcCCCCCcEEEEeeeeEEEecc
Q 014004 247 KYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLG-YCAQGDRTKNVGVVDSEYIVHLGL 325 (432)
Q Consensus 247 ~~~g~~~C~~~~~~ppcTgFVEiMAPVFSR~AwrCvwhmiQNDLvhGWGLDf~w~-~caqg~~~~kIGVVDa~~VvH~g~ 325 (432)
+.--+.-. ... -+.+||. +|+|++++.+ .+ ..|||.|..+- +++.-..-++|.=|+-.+..|...
T Consensus 246 ~~~~~~l~--~~~-d~~sG~~-----a~rR~~l~~i-~f-----~~gyg~e~ell~~~~~~~G~~~I~eVpi~~~~h~~~ 311 (387)
T 3f1y_A 246 NLFYPELA--GFV-QPLAGEF-----VADRELFCSI-PF-----LTGYAVETGIMIDVLKKVGLGAMAQVDLGERQNRHQ 311 (387)
T ss_dssp HHHCGGGT--TCS-CTTCSCE-----EEEHHHHTTS-CE-----ECSTTHHHHHHHHHHHHHCGGGEEEEEEEECCCCCC
T ss_pred HHHhHhhc--ccc-ccccccE-----EEEHHHHHhC-CC-----CCCcchHHHHHHHHHHhcCCCeEEEEecceeecCCC
Confidence 00000000 001 1234442 5899999876 22 37899888774 332211123588898888888755
Q ss_pred cc
Q 014004 326 PT 327 (432)
Q Consensus 326 Pt 327 (432)
++
T Consensus 312 ~~ 313 (387)
T 3f1y_A 312 HL 313 (387)
T ss_dssp CH
T ss_pred CH
Confidence 54
No 7
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=59.80 E-value=6 Score=33.89 Aligned_cols=109 Identities=17% Similarity=0.078 Sum_probs=60.0
Q ss_pred CCCcEEEEEeccccccchhHHhhcC---CCCCcEEEEEEecCccCccccc--ccc--CceeEEEe-ecccchhhhccccC
Q 014004 107 PPMNLLAIAAGIKQKKIVDQIVRKF---PSKDFVVMLFHYDGVVDEWKDL--VWA--DRAIHVSA-ANQTKWWFAKRFLH 178 (432)
Q Consensus 107 ~~k~Lla~~VG~kqk~~Vd~~VkKf---~~~nFdvmLFHYDG~vd~W~d~--eWs--~~aiHVsa-~kQtKWwfaKRFLH 178 (432)
.++.-|++|+=. ..+.+.+.++.. ...+|.|++. =||..|+=.+. ++. ..-+++.. .+..+= ..|. .
T Consensus 4 ~p~vsViIp~yn-~~~~l~~~l~Sl~~q~~~~~eiIvv-Dd~S~d~t~~~~~~~~~~~~~i~~i~~~n~G~~--~a~N-~ 78 (240)
T 3bcv_A 4 IPKVSVIVPIYN-VEKYLDQCVQALLAQTLSDIEIILI-DDESPDNCPKICDDYAAQYPNIKVIHKKNAGLG--MACN-S 78 (240)
T ss_dssp CCSEEEEEEESS-CTTTHHHHHHHHHTCSSSSEEEEEE-ECCCSSSHHHHHHHHHHHCSSEEEEECCCCCHH--HHHH-H
T ss_pred CCcEEEEEecCC-CHHHHHHHHHHHHhCcCCCeEEEEE-ECCCCcCHHHHHHHHHhhCCCEEEEECCCCChH--HHHH-H
Confidence 345667777633 334444444322 1246777665 47776652221 111 11133321 222211 1110 0
Q ss_pred ccccccccEEEEecccccCCCCCHHHHHHHHHHhCCcccCCC
Q 014004 179 PDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPA 220 (432)
Q Consensus 179 PDiVa~YDYIFLwDDDL~Vd~f~i~ryf~Ivr~~gLeISQPA 220 (432)
-=-.+..|||++.|+|..++...++++++.+++.+.++...+
T Consensus 79 g~~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~ 120 (240)
T 3bcv_A 79 GLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTG 120 (240)
T ss_dssp HHHHCCSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC-
T ss_pred HHHHcCCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEe
Confidence 011257799999999999999999999999998777766544
No 8
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=45.58 E-value=15 Score=38.80 Aligned_cols=37 Identities=19% Similarity=0.200 Sum_probs=30.9
Q ss_pred cccEEEEecccccCCCCCHHHHHHHHHHh-CCcccCCC
Q 014004 184 EYNYIFLWDEDIGVENFNPRRYLSIVKDE-GLEISQPA 220 (432)
Q Consensus 184 ~YDYIFLwDDDL~Vd~f~i~ryf~Ivr~~-gLeISQPA 220 (432)
.+|||+|.|+|..++...++++++.+++. ...+..|.
T Consensus 268 ~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~ 305 (657)
T 4fix_A 268 DCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQ 305 (657)
T ss_dssp CCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEE
T ss_pred CCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeE
Confidence 68999999999999999999999999876 34455554
No 9
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=32.69 E-value=43 Score=33.44 Aligned_cols=182 Identities=10% Similarity=0.061 Sum_probs=97.3
Q ss_pred cEEEEEeccccccchhHHhhcCC----CCCcEEEEEEecCccCccccc-c-----c----cCceeEEEee-----cccc-
Q 014004 110 NLLAIAAGIKQKKIVDQIVRKFP----SKDFVVMLFHYDGVVDEWKDL-V-----W----ADRAIHVSAA-----NQTK- 169 (432)
Q Consensus 110 ~Lla~~VG~kqk~~Vd~~VkKf~----~~nFdvmLFHYDG~vd~W~d~-e-----W----s~~aiHVsa~-----kQtK- 169 (432)
++|++|+ . .+++..+++... ..++.|+ +-=||++|+=.+. + . .-+.+..... +..|
T Consensus 2 slVIiP~-~--eE~I~~vl~~l~~~~~~~~~EII-VVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG 77 (397)
T 2bo4_A 2 SLVVFPF-K--HEHPEVLLHNVRVAAAHPRVHEV-LCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKG 77 (397)
T ss_dssp CEEEEEC-C--SSCHHHHHHHHHHHHHSTTCCEE-EEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHH
T ss_pred cEEEEeC-C--ccCHHHHHHHHHHhccCCCeEEE-EEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHH
Confidence 5788887 3 246777766431 2467764 4458888864332 1 1 1123333222 4555
Q ss_pred ---hhhhccccCccccccccEEEEeccccc-CCCCCHHHHHHHHHHhCCcccCCCCCC--CCCcccccccccccCcccce
Q 014004 170 ---WWFAKRFLHPDIVAEYNYIFLWDEDIG-VENFNPRRYLSIVKDEGLEISQPALDP--VKSEVHHPITARRRNSKAHR 243 (432)
Q Consensus 170 ---WwfaKRFLHPDiVa~YDYIFLwDDDL~-Vd~f~i~ryf~Ivr~~gLeISQPALd~--~s~~isH~iT~R~~~~~vHr 243 (432)
+..++.-+ -.+.+|+|.+.|-|+. .+...+.++++.+++ |.++..+.... ..+.+.+.+. |. +-+
T Consensus 78 ~Al~~G~~~Al---~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~-g~D~V~g~~~r~~~~~~~~~~~~-~~----ll~ 148 (397)
T 2bo4_A 78 DGMNTALRYFL---EETQWERIHFYDADITSFGPDWITKAEEAADF-GYGLVRHYFPRASTDAMITWMIT-RT----GFA 148 (397)
T ss_dssp HHHHHHHHHHH---HHCCCSEEEECCTTCSSCCHHHHHHHHHHHHT-TCSEEEEECCCCTTSCHHHHHTH-HH----HHH
T ss_pred HHHHHHHHHHH---HhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHc-CCCEEEEEeccccCCcHHHHHHH-HH----HHH
Confidence 22221000 0278999999999996 799999999987754 66666554321 1111222211 10 000
Q ss_pred eeecccCCCCCCCCCCCCCccceEEeecccccHHHHHHhhhh-hcCCCcccchhhhhhhhhhcCCCCCcEEEEe
Q 014004 244 RMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYM-IQNDLIHAWGLDIQLGYCAQGDRTKNVGVVD 316 (432)
Q Consensus 244 r~~~~~g~~~C~~~~~~ppcTgFVEiMAPVFSR~AwrCvwhm-iQNDLvhGWGLDf~w~~caqg~~~~kIGVVD 316 (432)
..|+. ..|. ..+.| -+||. +|+|++++.+... +.. ..+|||.|-.+...+.. .+.+|+-|.
T Consensus 149 ~~~~~---~~~~-~i~dp-~sG~~-----a~~R~vl~~l~~~~~~~-~~~~fg~eiel~~~a~~-~G~rI~EVp 210 (397)
T 2bo4_A 149 LLWPH---TELS-WIEQP-LGGEL-----LMRREVAAMLYEDERVR-RRSDWGIDTLYTFVTVQ-QGVSIYECY 210 (397)
T ss_dssp HHCTT---SSGG-GCSCT-TCCCE-----EEEHHHHHHHHHCHHHH-TCCSTTHHHHHHHHHHH-TTCCEEEEE
T ss_pred HHHHH---hhcc-ccccC-CcccE-----EEeHHHHHHHhhhcccC-cCCCcchHHHHHHHHHH-cCCEEEEEE
Confidence 01110 0111 11222 34555 5999999876321 112 56899999988766542 346777664
No 10
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=30.91 E-value=53 Score=33.08 Aligned_cols=108 Identities=18% Similarity=0.046 Sum_probs=56.4
Q ss_pred CCCcEEEEEeccccccchhHHhhcC---CCCCcEEEEEEecCccCcccc-c-cc--cCceeEEE-eecccchhhhccccC
Q 014004 107 PPMNLLAIAAGIKQKKIVDQIVRKF---PSKDFVVMLFHYDGVVDEWKD-L-VW--ADRAIHVS-AANQTKWWFAKRFLH 178 (432)
Q Consensus 107 ~~k~Lla~~VG~kqk~~Vd~~VkKf---~~~nFdvmLFHYDG~vd~W~d-~-eW--s~~aiHVs-a~kQtKWwfaKRFLH 178 (432)
.++.-+++++= +....+.+.++.. .-.+|.|++.- ||..|+=.+ + ++ ...-+++. ..+..+-. .+..
T Consensus 374 ~~~vsiii~~y-n~~~~l~~~l~s~~~q~~~~~eiivvd-d~S~d~t~~~~~~~~~~~~~i~~~~~~n~G~~~---a~n~ 448 (625)
T 2z86_A 374 VPLVSIYIPAY-NCSKYIVRCVESALNQTITDLEVCICD-DGSTDDTLRILQEHYANHPRVRFISQKNKGIGS---ASNT 448 (625)
T ss_dssp SCSEEEEEEES-SCTTTHHHHHHHHHSSSCCSEEEEEEE-ESCSSSHHHHHHHHHTTCTTEEEEEECCCCHHH---HHHH
T ss_pred CCeEEEEEeCC-CCHHHHHHHHHHHHhCcCCCeEEEEEE-CcCChhHHHHHHHHHhhCCcEEEEeCCCCCHHH---HHHH
Confidence 34556666663 3445555544432 13577776664 666664221 1 11 11123332 22333211 1111
Q ss_pred ccccccccEEEEecccccCCCCCHHHHHHHHHH-hCCcccCC
Q 014004 179 PDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKD-EGLEISQP 219 (432)
Q Consensus 179 PDiVa~YDYIFLwDDDL~Vd~f~i~ryf~Ivr~-~gLeISQP 219 (432)
-=-.+..|||++.|+|..++...++++++.+.+ .+..+..+
T Consensus 449 g~~~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~ 490 (625)
T 2z86_A 449 AVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYT 490 (625)
T ss_dssp HHHHCCSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEE
T ss_pred HHHhcCCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEe
Confidence 111257899999999999988888888877754 33444433
No 11
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=27.53 E-value=20 Score=33.76 Aligned_cols=31 Identities=23% Similarity=0.478 Sum_probs=25.0
Q ss_pred ccccEEEEeccc---ccCCCCCHHHHHHHHHHhCCccc
Q 014004 183 AEYNYIFLWDED---IGVENFNPRRYLSIVKDEGLEIS 217 (432)
Q Consensus 183 a~YDYIFLwDDD---L~Vd~f~i~ryf~Ivr~~gLeIS 217 (432)
.+|||+++.|-| ++.+..++-|++ +.|.+|.
T Consensus 52 ~~~dhllfIDAD~~~I~FdPe~V~rLl----~~g~DVV 85 (203)
T 2c0n_A 52 KDYDTLAFLDEDVVPIEIDFQKVEAKF----NEGYDVV 85 (203)
T ss_dssp TTCCEEEEECTTEEEEECCHHHHHHHH----HHTCSEE
T ss_pred CCCCEEEEEeCCCCccccCHHHHHHHH----hCCCCEE
Confidence 469999999999 988888888887 5566654
No 12
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=24.64 E-value=73 Score=34.14 Aligned_cols=126 Identities=13% Similarity=0.024 Sum_probs=68.2
Q ss_pred ccccEEEEecccccCCCCCHHHHHHHHH-HhCCcccCCCCCCCCCc-ccccccc-c---ccCcccceeeecccCCCCCCC
Q 014004 183 AEYNYIFLWDEDIGVENFNPRRYLSIVK-DEGLEISQPALDPVKSE-VHHPITA-R---RRNSKAHRRMYKYKGSGRCDD 256 (432)
Q Consensus 183 a~YDYIFLwDDDL~Vd~f~i~ryf~Ivr-~~gLeISQPALd~~s~~-isH~iT~-R---~~~~~vHrr~~~~~g~~~C~~ 256 (432)
+.+|||++.|+|..++...+.+.++.+. ..+..+.|......... +...... . .....++........ .
T Consensus 237 a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---- 311 (802)
T 4hg6_A 237 LKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLD-R---- 311 (802)
T ss_dssp CCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHH-H----
T ss_pred cCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhhHh-h----
Confidence 5899999999999999999999999985 44666666533211100 1000000 0 000001100000000 0
Q ss_pred CCCCCCccceEEeecccccHHHHHHhhhhhcCCCcccchhhhhhhhhhcCCCCCcEEEEeeeeEEEe
Q 014004 257 YSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHL 323 (432)
Q Consensus 257 ~~~~ppcTgFVEiMAPVFSR~AwrCvwhmiQNDLvhGWGLDf~w~~caqg~~~~kIGVVDa~~VvH~ 323 (432)
-..+ ++....=+|+|++++.+=. +++ ...+=|+.+...+.. .+.+++.++...+.|.
T Consensus 312 -~~~~----~~~G~~~~~Rr~al~~vGg--f~~--~~~~ED~~l~~rl~~-~G~ri~~~~~~~~~~~ 368 (802)
T 4hg6_A 312 -WGGA----FFCGSAAVLRRRALDEAGG--FAG--ETITEDAETALEIHS-RGWKSLYIDRAMIAGL 368 (802)
T ss_dssp -TTCC----CCCSSSEEEEHHHHHHHTT--CCC--SSSSHHHHHHHHHHT-TTCCEEECCCCCEEEC
T ss_pred -cCCc----eecccchhhhHHHHHHcCC--cCC--CCcchHHHHHHHHHH-cCCeEEEecCCEEEec
Confidence 0001 1122344789999998731 122 224578888765542 5678999988777776
No 13
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=22.30 E-value=51 Score=29.46 Aligned_cols=29 Identities=10% Similarity=0.273 Sum_probs=26.7
Q ss_pred ccccEEEEecccccCCCCCHHHHHHHHHH
Q 014004 183 AEYNYIFLWDEDIGVENFNPRRYLSIVKD 211 (432)
Q Consensus 183 a~YDYIFLwDDDL~Vd~f~i~ryf~Ivr~ 211 (432)
+.-|||+|.|.|..++...++++++.+++
T Consensus 73 A~g~yl~fln~D~~~~~~~l~~l~~~~~~ 101 (249)
T 2nxv_A 73 CKGRYVIFCHEDVELVDRGYDDLVAAIEA 101 (249)
T ss_dssp CCSSEEEEEETTEECSSCCHHHHHHHHHH
T ss_pred cCCCEEEEECCCcccCccHHHHHHHHHHh
Confidence 56899999999999999999999999887
No 14
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=20.67 E-value=45 Score=32.64 Aligned_cols=103 Identities=14% Similarity=0.135 Sum_probs=59.4
Q ss_pred CCcEEEEEeccccccchhHHhhcCC-CCCcEEEEEEecCccCccccccccC---ceeEEEeecccchhhhccccCccccc
Q 014004 108 PMNLLAIAAGIKQKKIVDQIVRKFP-SKDFVVMLFHYDGVVDEWKDLVWAD---RAIHVSAANQTKWWFAKRFLHPDIVA 183 (432)
Q Consensus 108 ~k~Lla~~VG~kqk~~Vd~~VkKf~-~~nFdvmLFHYDG~vd~W~d~eWs~---~aiHVsa~kQtKWwfaKRFLHPDiVa 183 (432)
.++-+.|-+- +......++|+... ...-+=++....+.-..--+..|.. .++.|....+.+=-+-.||+. +---
T Consensus 28 ~~FTvvi~ty-~R~~~L~~lv~~~~~~~~v~~IvVvWn~~~~~pp~~~~~~~~~~~vpv~v~~~~~nsLnnRF~p-~~~i 105 (293)
T 1omz_A 28 DSFTLIMQTY-NRTDLLLRLLNHYQAVPSLHKVIVVWNNVGEKGPEELWNSLGPHPIPVIFKPQTANKMRNRLQV-FPEV 105 (293)
T ss_dssp TCEEEEEEES-SCHHHHHHHHHHHTTSTTEEEEEEEECCTTCCCTHHHHHHTCCCSSCEEEEECSSCCGGGGGSC-CTTC
T ss_pred CceEEEEEee-cccHHHHHHHHHHhcCCCCCeEEEEeCCCCCCCChhhccccCCCCccEEEEeCCCCchhhccCC-CccC
Confidence 3455555443 33445556665443 2334445555443321222333422 134444444444345788754 4445
Q ss_pred cccEEEEecccccCCCCCHHHHHHHHHHh
Q 014004 184 EYNYIFLWDEDIGVENFNPRRYLSIVKDE 212 (432)
Q Consensus 184 ~YDYIFLwDDDL~Vd~f~i~ryf~Ivr~~ 212 (432)
+-|.||..|||+.++..+++.=|+.-+++
T Consensus 106 ~T~AVLslDDDv~l~~~el~faF~vWr~~ 134 (293)
T 1omz_A 106 ETNAVLMVDDDTLISAQDLVFAFSIWQQF 134 (293)
T ss_dssp CSSEEEEECTTEEECHHHHHHHHHHHTTS
T ss_pred CcCEEEEEcCCCCCCHHHHHHHHHHHHHC
Confidence 68999999999999999999988888754
Done!