Your job contains 1 sequence.
>014006
MANLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRV
AAVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSV
IILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGK
LYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSL
DEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGY
VKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPE
IQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIG
RTMAGTSFFALP
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014006
(432 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2010549 - symbol:AT1G27900 species:3702 "Arabi... 1763 1.1e-181 1
TAIR|locus:2088847 - symbol:AT3G26560 species:3702 "Arabi... 1084 1.0e-109 1
UNIPROTKB|F1P306 - symbol:LOC100858239 "Uncharacterized p... 1080 2.6e-109 1
UNIPROTKB|F1MEM4 - symbol:DHX8 "Uncharacterized protein" ... 1079 3.4e-109 1
UNIPROTKB|E2R9R9 - symbol:DHX8 "Uncharacterized protein" ... 1079 3.4e-109 1
UNIPROTKB|F5H658 - symbol:DHX8 "ATP-dependent RNA helicas... 1079 3.4e-109 1
UNIPROTKB|Q14562 - symbol:DHX8 "ATP-dependent RNA helicas... 1079 3.4e-109 1
UNIPROTKB|F1S1H3 - symbol:DHX8 "Uncharacterized protein" ... 1079 3.4e-109 1
MGI|MGI:1306823 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box... 1079 3.4e-109 1
RGD|1310723 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box pol... 1079 3.4e-109 1
UNIPROTKB|D4A805 - symbol:Dhx8 "Protein Dhx8" species:101... 1079 3.4e-109 1
ZFIN|ZDB-GENE-050809-39 - symbol:dhx8 "DEAH (Asp-Glu-Ala-... 1076 7.0e-109 1
TAIR|locus:2062492 - symbol:MEE29 "maternal effect embryo... 1073 1.5e-108 1
FB|FBgn0086444 - symbol:l(2)37Cb "lethal (2) 37Cb" specie... 1067 6.3e-108 1
UNIPROTKB|F1PGL2 - symbol:DHX16 "Uncharacterized protein"... 1066 8.1e-108 1
RGD|1302963 - symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box po... 1066 8.1e-108 1
UNIPROTKB|E1BF68 - symbol:DHX16 "Uncharacterized protein"... 1065 1.0e-107 1
TAIR|locus:2033723 - symbol:ESP3 "ENHANCED SILENCING PHEN... 1065 1.0e-107 1
FB|FBgn0026713 - symbol:l(1)G0007 "lethal (1) G0007" spec... 1064 1.3e-107 1
UNIPROTKB|G4NFJ0 - symbol:MGG_08807 "Pre-mRNA-splicing fa... 1063 1.7e-107 1
UNIPROTKB|F1RU83 - symbol:DHX16 "Putative pre-mRNA-splici... 1062 2.1e-107 1
UNIPROTKB|Q767K6 - symbol:DHX16 "Putative pre-mRNA-splici... 1062 2.1e-107 1
ZFIN|ZDB-GENE-030131-8589 - symbol:dhx16 "DEAH (Asp-Glu-A... 1061 2.7e-107 1
UNIPROTKB|G4N1N4 - symbol:MGG_07501 "ATP-dependent RNA he... 1060 3.5e-107 1
UNIPROTKB|O60231 - symbol:DHX16 "Putative pre-mRNA-splici... 1059 4.4e-107 1
ASPGD|ASPL0000070923 - symbol:AN4721 species:162425 "Emer... 1058 5.7e-107 1
ASPGD|ASPL0000006947 - symbol:AN5827 species:162425 "Emer... 1058 5.7e-107 1
DICTYBASE|DDB_G0291183 - symbol:dhx8 "putative RNA splici... 1058 5.7e-107 1
UNIPROTKB|Q17R09 - symbol:DHX38 "Pre-mRNA-splicing factor... 1051 3.1e-106 1
UNIPROTKB|Q92620 - symbol:DHX38 "Pre-mRNA-splicing factor... 1051 3.1e-106 1
UNIPROTKB|F1S3A8 - symbol:DHX38 "Uncharacterized protein"... 1051 3.1e-106 1
UNIPROTKB|E2RC56 - symbol:DHX38 "Uncharacterized protein"... 1050 4.0e-106 1
RGD|1310345 - symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box po... 1049 5.1e-106 1
FB|FBgn0086895 - symbol:pea "peanuts" species:7227 "Droso... 1048 6.5e-106 1
GENEDB_PFALCIPARUM|PF10_0294 - symbol:PF10_0294 "RNA heli... 1048 6.5e-106 1
UNIPROTKB|Q8IJA4 - symbol:PF10_0294 "RNA helicase, putati... 1048 6.5e-106 1
CGD|CAL0004768 - symbol:PRP22 species:5476 "Candida albic... 1046 1.1e-105 1
DICTYBASE|DDB_G0285937 - symbol:dhx16 "putative RNA splic... 1044 1.7e-105 1
POMBASE|SPBC19C2.01 - symbol:cdc28 "ATP-dependent RNA hel... 1041 3.6e-105 1
POMBASE|SPAC10F6.02c - symbol:prp22 "ATP-dependent RNA he... 1039 5.8e-105 1
ZFIN|ZDB-GENE-040426-1144 - symbol:dhx38 "DEAH (Asp-Glu-A... 1039 5.8e-105 1
WB|WBGene00003389 - symbol:mog-1 species:6239 "Caenorhabd... 1024 2.3e-103 1
UNIPROTKB|P34498 - symbol:mog-1 "Probable pre-mRNA-splici... 1024 2.3e-103 1
WB|WBGene00003393 - symbol:mog-5 species:6239 "Caenorhabd... 1023 2.9e-103 1
UNIPROTKB|Q09530 - symbol:mog-5 "Probable pre-mRNA-splici... 1023 2.9e-103 1
DICTYBASE|DDB_G0285843 - symbol:helD "putative RNA splici... 1015 2.0e-102 1
SGD|S000000815 - symbol:PRP22 "DEAH-box RNA-dependent ATP... 1010 6.9e-102 1
POMBASE|SPBC1711.17 - symbol:prp16 "ATP-dependent RNA hel... 983 3.6e-101 2
UNIPROTKB|F1MVJ1 - symbol:DHX38 "Pre-mRNA-splicing factor... 997 1.7e-100 1
WB|WBGene00003392 - symbol:mog-4 species:6239 "Caenorhabd... 991 7.1e-100 1
UNIPROTKB|O45244 - symbol:mog-4 "Probable pre-mRNA-splici... 991 7.1e-100 1
ASPGD|ASPL0000014477 - symbol:AN4032 species:162425 "Emer... 988 1.5e-99 1
UNIPROTKB|G4MTU4 - symbol:MGG_11351 "Pre-mRNA-splicing fa... 977 2.2e-98 1
ZFIN|ZDB-GENE-080507-1 - symbol:dhx40 "DEAH (Asp-Glu-Ala-... 976 2.8e-98 1
ZFIN|ZDB-GENE-030131-650 - symbol:dhx15 "DEAH (Asp-Glu-Al... 969 1.5e-97 1
ASPGD|ASPL0000059403 - symbol:AN0133 species:162425 "Emer... 965 4.1e-97 1
CGD|CAL0002409 - symbol:orf19.5865 species:5476 "Candida ... 965 4.1e-97 1
UNIPROTKB|F1NHI3 - symbol:DHX15 "Uncharacterized protein"... 965 4.1e-97 1
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 963 6.6e-97 1
WB|WBGene00018967 - symbol:F56D2.6 species:6239 "Caenorha... 962 8.4e-97 1
UNIPROTKB|Q20875 - symbol:F56D2.6 "Putative pre-mRNA-spli... 962 8.4e-97 1
UNIPROTKB|A5D7D9 - symbol:DHX15 "Uncharacterized protein"... 961 1.1e-96 1
UNIPROTKB|E2R2U3 - symbol:DHX15 "Uncharacterized protein"... 961 1.1e-96 1
UNIPROTKB|O43143 - symbol:DHX15 "Putative pre-mRNA-splici... 961 1.1e-96 1
UNIPROTKB|F1S5A8 - symbol:DHX15 "Uncharacterized protein"... 961 1.1e-96 1
MGI|MGI:1099786 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) bo... 961 1.1e-96 1
RGD|1308072 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box po... 961 1.1e-96 1
FB|FBgn0033160 - symbol:CG11107 species:7227 "Drosophila ... 960 1.4e-96 1
POMBASE|SPBC16H5.10c - symbol:prp43 "ATP-dependent RNA he... 959 1.8e-96 1
DICTYBASE|DDB_G0270110 - symbol:dhx33 "DEAD/DEAH box heli... 953 7.6e-96 1
DICTYBASE|DDB_G0285213 - symbol:dhx15 "putative RNA splic... 952 9.7e-96 1
TAIR|locus:2065210 - symbol:AT2G47250 species:3702 "Arabi... 952 9.7e-96 1
TAIR|locus:2095989 - symbol:AT3G62310 species:3702 "Arabi... 946 4.2e-95 1
CGD|CAL0000153 - symbol:orf19.1687 species:5476 "Candida ... 936 4.8e-94 1
SGD|S000005294 - symbol:PRP2 "RNA-dependent ATPase in the... 936 4.8e-94 1
UNIPROTKB|Q8IX18 - symbol:DHX40 "Probable ATP-dependent R... 928 3.4e-93 1
MGI|MGI:1914737 - symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) bo... 927 4.3e-93 1
UNIPROTKB|Q08DS9 - symbol:DHX40 "Uncharacterized protein"... 926 5.5e-93 1
UNIPROTKB|E2RPC8 - symbol:DHX40 "Uncharacterized protein"... 926 5.5e-93 1
UNIPROTKB|J9NVQ3 - symbol:DHX40 "Uncharacterized protein"... 926 5.5e-93 1
UNIPROTKB|F1S235 - symbol:LOC100519272 "Uncharacterized p... 926 5.5e-93 1
UNIPROTKB|G4NHA6 - symbol:MGG_03893 "Pre-mRNA-splicing fa... 926 5.5e-93 1
RGD|1359618 - symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box po... 926 5.5e-93 1
ASPGD|ASPL0000052850 - symbol:AN1363 species:162425 "Emer... 910 2.7e-91 1
UNIPROTKB|G4MKC3 - symbol:MGG_02518 "ATP-dependent RNA he... 897 6.5e-90 1
CGD|CAL0005059 - symbol:orf19.2818 species:5476 "Candida ... 896 8.3e-90 1
SGD|S000001794 - symbol:PRP16 "DEAH-box RNA helicase invo... 890 3.6e-89 1
POMBASE|SPAC2G11.11c - symbol:prh1 "ATP-dependent RNA hel... 888 5.9e-89 1
TAIR|locus:2197965 - symbol:AT1G26370 species:3702 "Arabi... 569 6.3e-89 2
ZFIN|ZDB-GENE-070410-11 - symbol:zgc:158828 "zgc:158828" ... 884 1.6e-88 1
FB|FBgn0031631 - symbol:CG3225 species:7227 "Drosophila m... 876 1.1e-87 1
MGI|MGI:2445102 - symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) bo... 871 3.7e-87 1
GENEDB_PFALCIPARUM|PFL1525c - symbol:PFL1525c "pre-mRNA s... 541 1.3e-86 2
UNIPROTKB|Q8I5A4 - symbol:PFL1525c "Pre-mRNA splicing fac... 541 1.3e-86 2
UNIPROTKB|E1BYA5 - symbol:DHX33 "Uncharacterized protein"... 865 1.6e-86 1
UNIPROTKB|E1C4U5 - symbol:DHX35 "Uncharacterized protein"... 864 2.0e-86 1
UNIPROTKB|E1BDN4 - symbol:DHX35 "Uncharacterized protein"... 864 2.0e-86 1
UNIPROTKB|Q5THR1 - symbol:DHX35 "Probable ATP-dependent R... 863 2.6e-86 1
UNIPROTKB|Q9H5Z1 - symbol:DHX35 "Probable ATP-dependent R... 863 2.6e-86 1
GENEDB_PFALCIPARUM|MAL13P1.322 - symbol:MAL13P1.322 "spli... 506 3.2e-86 2
WARNING: Descriptions of 208 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 1763 (625.7 bits), Expect = 1.1e-181, P = 1.1e-181
Identities = 344/424 (81%), Positives = 370/424 (87%)
Query: 1 MANLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXX 60
MANLPILQ+EE I IGETGSGKSTQLSQILHRHGYTKSG+I +TQP
Sbjct: 1 MANLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQPRRV 60
Query: 61 XXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSV 120
QEL V LGE+VGYAIRFEDRT+ +T IKYLTDGVLLRE LSNP L YSV
Sbjct: 61 AAVSVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYSV 120
Query: 121 IILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGK 180
IILDEAHERSLNTDILLGLVKRLV +RAS K+LITSATLDGEKVS+FFS CP LNVPGK
Sbjct: 121 IILDEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPGK 180
Query: 181 LYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSL 240
LYPVEIL+SKERP SY+ES+LK AIDIHVREPEGD+LIFMTGQDDIEKLVS+LE+K+RSL
Sbjct: 181 LYPVEILYSKERPVSYIESSLKVAIDIHVREPEGDILIFMTGQDDIEKLVSRLEEKVRSL 240
Query: 241 DEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGY 300
EGSCMDA+I PLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVID GY
Sbjct: 241 AEGSCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDSGY 300
Query: 301 VKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPE 360
VKQRQYNPSSGM+SLDV+QISKVQANQR GRAGRTRPGKCYRLYP VY D+FLD T+PE
Sbjct: 301 VKQRQYNPSSGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLDATIPE 360
Query: 361 IQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIG 420
IQR+SLAGSVLYLKSLDL DI++LKFDFLD PSSESLEDALKQLY IDAIDENG+IT IG
Sbjct: 361 IQRTSLAGSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFIDAIDENGAITRIG 420
Query: 421 RTMA 424
RTM+
Sbjct: 421 RTMS 424
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 1084 (386.6 bits), Expect = 1.0e-109, P = 1.0e-109
Identities = 206/422 (48%), Positives = 292/422 (69%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
+LPI + ++ + IGETGSGK+TQ++Q L GYT G IG TQP
Sbjct: 514 SLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQPRRVAA 573
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E G RLGEEVGYAIRFED T T+IKY+TDG+LLREIL + +LS YSVI+
Sbjct: 574 MSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIM 633
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+++TD+L GL+K+L+ R L++++TSATLD EK S +F NC +PG+ +
Sbjct: 634 LDEAHERTIHTDVLFGLLKKLMKRRLD-LRLIVTSATLDAEKFSGYFFNCNIFTIPGRTF 692
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVEIL++K+ T YL++AL T + IH+ EPEGD+L+F+TGQ++I+ L ++++ L +
Sbjct: 693 PVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMKGLGK 752
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ + +ILP++ +LP EMQ R+F PPPP R+ +V+TNIAE SLT+DG+ YV+D G+ K
Sbjct: 753 -NVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAK 811
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q YNP G+ SL + IS+ A QR GRAGRT PGKCYRLY + Y +E ++PEIQ
Sbjct: 812 QNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQ 871
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R +L + L +K++ ++D+ L FDF+DPP ++L A++QLY + A+DE G +T +GR
Sbjct: 872 RINLGMTTLTMKAMGINDL--LSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTKLGRK 929
Query: 423 MA 424
MA
Sbjct: 930 MA 931
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 1080 (385.2 bits), Expect = 2.6e-109, P = 2.6e-109
Identities = 207/422 (49%), Positives = 290/422 (68%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
+LPI + +E + IGETGSGK+TQ++Q L GYT G IG TQP
Sbjct: 512 SLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAA 571
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E G LG+EVGY IRFED TS T+IKY+TDG+LLRE L +PDL+ Y++I+
Sbjct: 572 MSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIM 631
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+++TD+L GL+K+ V R +K+++TSATLD K S++F P +PG+ Y
Sbjct: 632 LDEAHERTIHTDVLFGLLKKTVQKRQD-MKLIVTSATLDAVKFSQYFYEAPIFTIPGRTY 690
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVEIL++KE T YL+++L T + IH+ EP GD+L+F+TGQ++I+ L ++++SL
Sbjct: 691 PVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGP 750
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ +ILP++ +LP EMQ R+F P PP R+ +++TNIAETSLT+DG+ YV+D G+VK
Sbjct: 751 -DVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVK 809
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q+ YN +G+ L V IS+ QA QR GRAGRT PGKCYRLY Y DE L VPEIQ
Sbjct: 810 QKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQ 869
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R++LA +VL LK++ ++D+ L FDF+D P E+L A++QLY + A+D+ G +T +GR
Sbjct: 870 RTNLASTVLSLKAMGINDL--LSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 927
Query: 423 MA 424
MA
Sbjct: 928 MA 929
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 1079 (384.9 bits), Expect = 3.4e-109, P = 3.4e-109
Identities = 207/422 (49%), Positives = 290/422 (68%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
+LPI + +E + IGETGSGK+TQ++Q L GYT G IG TQP
Sbjct: 574 SLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAA 633
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E G LG+EVGY IRFED TS T+IKY+TDG+LLRE L +PDL+ Y++I+
Sbjct: 634 MSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIM 693
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+++TD+L GL+K+ V R +K+++TSATLD K S++F P +PG+ Y
Sbjct: 694 LDEAHERTIHTDVLFGLLKKTVQKRQD-MKLIVTSATLDAVKFSQYFYEAPIFTIPGRTY 752
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVEIL++KE T YL+++L T + IH+ EP GD+L+F+TGQ++I+ L ++++SL
Sbjct: 753 PVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGP 812
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ +ILP++ +LP EMQ R+F P PP R+ +++TNIAETSLT+DG+ YV+D G+VK
Sbjct: 813 -DVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVK 871
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q+ YN +G+ L V IS+ QA QR GRAGRT PGKCYRLY Y DE L VPEIQ
Sbjct: 872 QKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQ 931
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R++LA +VL LK++ ++D+ L FDF+D P E+L A++QLY + A+D+ G +T +GR
Sbjct: 932 RTNLASTVLSLKAMGINDL--LSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 989
Query: 423 MA 424
MA
Sbjct: 990 MA 991
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 1079 (384.9 bits), Expect = 3.4e-109, P = 3.4e-109
Identities = 207/422 (49%), Positives = 290/422 (68%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
+LPI + +E + IGETGSGK+TQ++Q L GYT G IG TQP
Sbjct: 560 SLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAA 619
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E G LG+EVGY IRFED TS T+IKY+TDG+LLRE L +PDL+ Y++I+
Sbjct: 620 MSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIM 679
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+++TD+L GL+K+ V R +K+++TSATLD K S++F P +PG+ Y
Sbjct: 680 LDEAHERTIHTDVLFGLLKKTVQKRQD-MKLIVTSATLDAVKFSQYFYEAPIFTIPGRTY 738
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVEIL++KE T YL+++L T + IH+ EP GD+L+F+TGQ++I+ L ++++SL
Sbjct: 739 PVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGP 798
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ +ILP++ +LP EMQ R+F P PP R+ +++TNIAETSLT+DG+ YV+D G+VK
Sbjct: 799 -DVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVK 857
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q+ YN +G+ L V IS+ QA QR GRAGRT PGKCYRLY Y DE L VPEIQ
Sbjct: 858 QKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQ 917
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R++LA +VL LK++ ++D+ L FDF+D P E+L A++QLY + A+D+ G +T +GR
Sbjct: 918 RTNLASTVLSLKAMGINDL--LSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 975
Query: 423 MA 424
MA
Sbjct: 976 MA 977
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 1079 (384.9 bits), Expect = 3.4e-109, P = 3.4e-109
Identities = 207/422 (49%), Positives = 290/422 (68%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
+LPI + +E + IGETGSGK+TQ++Q L GYT G IG TQP
Sbjct: 564 SLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAA 623
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E G LG+EVGY IRFED TS T+IKY+TDG+LLRE L +PDL+ Y++I+
Sbjct: 624 MSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIM 683
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+++TD+L GL+K+ V R +K+++TSATLD K S++F P +PG+ Y
Sbjct: 684 LDEAHERTIHTDVLFGLLKKTVQKRQD-MKLIVTSATLDAVKFSQYFYEAPIFTIPGRTY 742
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVEIL++KE T YL+++L T + IH+ EP GD+L+F+TGQ++I+ L ++++SL
Sbjct: 743 PVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGP 802
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ +ILP++ +LP EMQ R+F P PP R+ +++TNIAETSLT+DG+ YV+D G+VK
Sbjct: 803 -DVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVK 861
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q+ YN +G+ L V IS+ QA QR GRAGRT PGKCYRLY Y DE L VPEIQ
Sbjct: 862 QKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQ 921
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R++LA +VL LK++ ++D+ L FDF+D P E+L A++QLY + A+D+ G +T +GR
Sbjct: 922 RTNLASTVLSLKAMGINDL--LSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 979
Query: 423 MA 424
MA
Sbjct: 980 MA 981
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 1079 (384.9 bits), Expect = 3.4e-109, P = 3.4e-109
Identities = 207/422 (49%), Positives = 290/422 (68%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
+LPI + +E + IGETGSGK+TQ++Q L GYT G IG TQP
Sbjct: 564 SLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAA 623
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E G LG+EVGY IRFED TS T+IKY+TDG+LLRE L +PDL+ Y++I+
Sbjct: 624 MSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIM 683
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+++TD+L GL+K+ V R +K+++TSATLD K S++F P +PG+ Y
Sbjct: 684 LDEAHERTIHTDVLFGLLKKTVQKRQD-MKLIVTSATLDAVKFSQYFYEAPIFTIPGRTY 742
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVEIL++KE T YL+++L T + IH+ EP GD+L+F+TGQ++I+ L ++++SL
Sbjct: 743 PVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGP 802
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ +ILP++ +LP EMQ R+F P PP R+ +++TNIAETSLT+DG+ YV+D G+VK
Sbjct: 803 -DVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVK 861
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q+ YN +G+ L V IS+ QA QR GRAGRT PGKCYRLY Y DE L VPEIQ
Sbjct: 862 QKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQ 921
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R++LA +VL LK++ ++D+ L FDF+D P E+L A++QLY + A+D+ G +T +GR
Sbjct: 922 RTNLASTVLSLKAMGINDL--LSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 979
Query: 423 MA 424
MA
Sbjct: 980 MA 981
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 1079 (384.9 bits), Expect = 3.4e-109, P = 3.4e-109
Identities = 207/422 (49%), Positives = 290/422 (68%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
+LPI + +E + IGETGSGK+TQ++Q L GYT G IG TQP
Sbjct: 556 SLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAA 615
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E G LG+EVGY IRFED TS T+IKY+TDG+LLRE L +PDL+ Y++I+
Sbjct: 616 MSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIM 675
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+++TD+L GL+K+ V R +K+++TSATLD K S++F P +PG+ Y
Sbjct: 676 LDEAHERTIHTDVLFGLLKKTVQKRQD-MKLIVTSATLDAVKFSQYFYEAPIFTIPGRTY 734
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVEIL++KE T YL+++L T + IH+ EP GD+L+F+TGQ++I+ L ++++SL
Sbjct: 735 PVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGP 794
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ +ILP++ +LP EMQ R+F P PP R+ +++TNIAETSLT+DG+ YV+D G+VK
Sbjct: 795 -DVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVK 853
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q+ YN +G+ L V IS+ QA QR GRAGRT PGKCYRLY Y DE L VPEIQ
Sbjct: 854 QKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQ 913
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R++LA +VL LK++ ++D+ L FDF+D P E+L A++QLY + A+D+ G +T +GR
Sbjct: 914 RTNLASTVLSLKAMGINDL--LSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 971
Query: 423 MA 424
MA
Sbjct: 972 MA 973
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 1079 (384.9 bits), Expect = 3.4e-109, P = 3.4e-109
Identities = 207/422 (49%), Positives = 290/422 (68%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
+LPI + +E + IGETGSGK+TQ++Q L GYT G IG TQP
Sbjct: 588 SLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAA 647
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E G LG+EVGY IRFED TS T+IKY+TDG+LLRE L +PDL+ Y++I+
Sbjct: 648 MSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIM 707
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+++TD+L GL+K+ V R +K+++TSATLD K S++F P +PG+ Y
Sbjct: 708 LDEAHERTIHTDVLFGLLKKTVQKRQD-MKLIVTSATLDAVKFSQYFYEAPIFTIPGRTY 766
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVEIL++KE T YL+++L T + IH+ EP GD+L+F+TGQ++I+ L ++++SL
Sbjct: 767 PVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGP 826
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ +ILP++ +LP EMQ R+F P PP R+ +++TNIAETSLT+DG+ YV+D G+VK
Sbjct: 827 -DVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVK 885
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q+ YN +G+ L V IS+ QA QR GRAGRT PGKCYRLY Y DE L VPEIQ
Sbjct: 886 QKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQ 945
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R++LA +VL LK++ ++D+ L FDF+D P E+L A++QLY + A+D+ G +T +GR
Sbjct: 946 RTNLASTVLSLKAMGINDL--LSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 1003
Query: 423 MA 424
MA
Sbjct: 1004 MA 1005
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 1079 (384.9 bits), Expect = 3.4e-109, P = 3.4e-109
Identities = 207/422 (49%), Positives = 290/422 (68%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
+LPI + +E + IGETGSGK+TQ++Q L GYT G IG TQP
Sbjct: 533 SLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAA 592
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E G LG+EVGY IRFED TS T+IKY+TDG+LLRE L +PDL+ Y++I+
Sbjct: 593 MSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIM 652
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+++TD+L GL+K+ V R +K+++TSATLD K S++F P +PG+ Y
Sbjct: 653 LDEAHERTIHTDVLFGLLKKTVQKRQD-MKLIVTSATLDAVKFSQYFYEAPIFTIPGRTY 711
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVEIL++KE T YL+++L T + IH+ EP GD+L+F+TGQ++I+ L ++++SL
Sbjct: 712 PVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGP 771
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ +ILP++ +LP EMQ R+F P PP R+ +++TNIAETSLT+DG+ YV+D G+VK
Sbjct: 772 -DVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVK 830
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q+ YN +G+ L V IS+ QA QR GRAGRT PGKCYRLY Y DE L VPEIQ
Sbjct: 831 QKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQ 890
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R++LA +VL LK++ ++D+ L FDF+D P E+L A++QLY + A+D+ G +T +GR
Sbjct: 891 RTNLASTVLSLKAMGINDL--LSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 948
Query: 423 MA 424
MA
Sbjct: 949 MA 950
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 1079 (384.9 bits), Expect = 3.4e-109, P = 3.4e-109
Identities = 207/422 (49%), Positives = 290/422 (68%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
+LPI + +E + IGETGSGK+TQ++Q L GYT G IG TQP
Sbjct: 586 SLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAA 645
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E G LG+EVGY IRFED TS T+IKY+TDG+LLRE L +PDL+ Y++I+
Sbjct: 646 MSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIM 705
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+++TD+L GL+K+ V R +K+++TSATLD K S++F P +PG+ Y
Sbjct: 706 LDEAHERTIHTDVLFGLLKKTVQKRQD-MKLIVTSATLDAVKFSQYFYEAPIFTIPGRTY 764
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVEIL++KE T YL+++L T + IH+ EP GD+L+F+TGQ++I+ L ++++SL
Sbjct: 765 PVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGP 824
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ +ILP++ +LP EMQ R+F P PP R+ +++TNIAETSLT+DG+ YV+D G+VK
Sbjct: 825 -DVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVK 883
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q+ YN +G+ L V IS+ QA QR GRAGRT PGKCYRLY Y DE L VPEIQ
Sbjct: 884 QKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQ 943
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R++LA +VL LK++ ++D+ L FDF+D P E+L A++QLY + A+D+ G +T +GR
Sbjct: 944 RTNLASTVLSLKAMGINDL--LSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 1001
Query: 423 MA 424
MA
Sbjct: 1002 MA 1003
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 1076 (383.8 bits), Expect = 7.0e-109, P = 7.0e-109
Identities = 206/422 (48%), Positives = 289/422 (68%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
+LPI + +E + IGETGSGK+TQ++Q L GYT G IG TQP
Sbjct: 554 SLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTTRGKIGCTQPRRVAA 613
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E G LG+EVGY IRFED TS T+IKY+TDG+LLRE L +PDL Y++I+
Sbjct: 614 MSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLGQYAIIM 673
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+++TD+L GL+K+ V R +K+++TSATLD K S++F P +PG+ Y
Sbjct: 674 LDEAHERTIHTDVLFGLLKKTVQKRTD-MKLIVTSATLDAVKFSQYFYEAPIFTIPGRTY 732
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVE+L++KE T YL+++L T + IH+ EP GD+L+F+TGQ++I+ L ++++SL
Sbjct: 733 PVEVLYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGP 792
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ +ILP++ +LP EMQ R+F P PP R+ +++TNIAETSLT+DG+ YV+D G+VK
Sbjct: 793 -DVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVK 851
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q+ YN +G+ L V IS+ QA QR GRAGRT PGKCYRLY Y DE L VPEIQ
Sbjct: 852 QKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQ 911
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R++LA +VL LK++ ++D+ L FDF+D P E+L A++QLY + A+D+ G +T +GR
Sbjct: 912 RTNLASTVLSLKAMGINDL--LSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 969
Query: 423 MA 424
MA
Sbjct: 970 MA 971
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 1073 (382.8 bits), Expect = 1.5e-108, P = 1.5e-108
Identities = 210/421 (49%), Positives = 282/421 (66%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LPI Y + + +GETGSGK+TQ+ Q LH GYTK G +G TQP
Sbjct: 404 LPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKLGKVGCTQPRRVAAM 463
Query: 64 XXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
QE+G +LG EVGY+IRFED TSE+T++KY+TDG+LLRE+L PDL YSVII+
Sbjct: 464 SVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPDLGSYSVIIV 523
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYP 183
DEAHER+L TDIL GLVK + R LK+LI+SAT+D EK S FF P PG+ YP
Sbjct: 524 DEAHERTLRTDILFGLVKDIARARPD-LKLLISSATMDAEKFSDFFDQAPIFRFPGRRYP 582
Query: 184 VEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEG 243
V+I + Y+++A+ T + IHV+EP GDVL+F+ GQ++IE + L+ KIR L
Sbjct: 583 VDICFTTAPEADYMDAAITTVLTIHVKEPLGDVLVFLPGQEEIEAVEENLKHKIRGLGT- 641
Query: 244 SCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQ 303
+ +I P++ +LP E+Q ++F P P R+ +++TNIAETSLT+DG+ YV+D G+ K
Sbjct: 642 KIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKM 701
Query: 304 RQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQR 363
+ YNP +GM SL V ISK A QR GRAGRT PGKCYRLY + Y+++ D TVPEIQR
Sbjct: 702 KSYNPRTGMESLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQR 761
Query: 364 SSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTM 423
++LA VL LKSL + N+L FDF+DPP SE+L +L+ L+ + A+++ G +T GR M
Sbjct: 762 TNLASVVLSLKSLGIH--NLLNFDFMDPPPSEALIKSLELLFALGALNQLGELTKAGRRM 819
Query: 424 A 424
A
Sbjct: 820 A 820
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 1067 (380.7 bits), Expect = 6.3e-108, P = 6.3e-108
Identities = 206/423 (48%), Positives = 287/423 (67%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPXXXX 61
+LP+ ++E + GETGSGK+TQ+ Q L G+TK +IG TQP
Sbjct: 251 SLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKKMIGCTQPRRVA 310
Query: 62 XXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
+E+GV+LG EVGY+IRFED TS+RT++KY+TDG L RE LS PDL+ YSV+
Sbjct: 311 AMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLSEPDLASYSVM 370
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
I+DEAHER+L+TDIL GLVK + R +LK+LI+SATLD EK S FF + P +PG+
Sbjct: 371 IIDEAHERTLHTDILFGLVKDIARFRP-ELKLLISSATLDAEKFSAFFDDAPIFRIPGRR 429
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLD 241
YPV+I ++K Y+++ + + IH +P GD+L+F+TGQD+IE L D+++ L
Sbjct: 430 YPVDIFYTKAPEADYIDACCVSVLQIHATQPLGDILVFLTGQDEIETCQEVLHDRVKRLG 489
Query: 242 EGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYV 301
+ +++P++ +LP +MQ ++F P PPN R+ I++TNIAETSLT+D ++YVID G+
Sbjct: 490 S-KIRELIVIPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNIIYVIDPGFA 548
Query: 302 KQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEI 361
KQ +N +GM SL VV ISK ANQR GRAGRT PGKC+RLY + Y E D TVPEI
Sbjct: 549 KQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELEDNTVPEI 608
Query: 362 QRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGR 421
QR +L +VL LK+L ++D+ + FDFLDPP E+L AL+QLY + A++ +G +T +GR
Sbjct: 609 QRINLGNAVLMLKALGINDL--IHFDFLDPPPHETLVLALEQLYALGALNHHGELTKLGR 666
Query: 422 TMA 424
MA
Sbjct: 667 RMA 669
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 1066 (380.3 bits), Expect = 8.1e-108, P = 8.1e-108
Identities = 204/423 (48%), Positives = 284/423 (67%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPXXXX 61
+LP+ + E + GETGSGK+TQ+ Q L GYTK G+ I TQP
Sbjct: 399 SLPVFPFREELLAAIADHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRRVA 458
Query: 62 XXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
+E+GV+LG EVGY+IRFED TSERT+++Y+TDG+LLRE LS PDL+ YSV+
Sbjct: 459 AMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVV 518
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
++DEAHER+L+TDIL GL+K + R +LK+L+ SATLD + S FF + P +PG+
Sbjct: 519 MVDEAHERTLHTDILFGLIKDVARFRP-ELKVLVASATLDTARFSTFFDDAPVFRIPGRR 577
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLD 241
+PV+I ++K YLE+ + + + IHV +P GD+L+F+TGQ++IE L+D+ R L
Sbjct: 578 FPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLG 637
Query: 242 EGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYV 301
+ ++LP++ +LP +MQ R+F P PP R+ +V+TNIAETSLT++G++YV+D G+
Sbjct: 638 S-KIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFC 696
Query: 302 KQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEI 361
KQ+ YNP +GM SL V SK ANQR GRAGR GKC+RLY + Y E + TVPEI
Sbjct: 697 KQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEI 756
Query: 362 QRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGR 421
QR+SL VL LKSL + D+ + FDFLDPP E+L AL+QLY + A++ G +T+ GR
Sbjct: 757 QRTSLGNVVLLLKSLGIHDL--MHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGR 814
Query: 422 TMA 424
MA
Sbjct: 815 KMA 817
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 1066 (380.3 bits), Expect = 8.1e-108, P = 8.1e-108
Identities = 204/423 (48%), Positives = 284/423 (67%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPXXXX 61
+LP+ + E + GETGSGK+TQ+ Q L GYTK G+ I TQP
Sbjct: 401 SLPVFPFREELLTAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRRVA 460
Query: 62 XXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
+E+GV+LG EVGY+IRFED TSERT+++Y+TDG+LLRE LS PDL+ YSV+
Sbjct: 461 AMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVV 520
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
++DEAHER+L+TDIL GL+K + R +LK+L+ SATLD + S FF + P +PG+
Sbjct: 521 MVDEAHERTLHTDILFGLIKDVARFRP-ELKVLVASATLDTARFSAFFDDAPVFRIPGRR 579
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLD 241
+PV+I ++K YLE+ + + + IHV +P GD+L+F+TGQ++IE L+D+ R L
Sbjct: 580 FPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLG 639
Query: 242 EGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYV 301
+ ++LP++ +LP +MQ R+F P PP R+ +V+TNIAETSLT++G++YV+D G+
Sbjct: 640 S-KIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFC 698
Query: 302 KQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEI 361
KQ+ YNP +GM SL V SK ANQR GRAGR GKC+RLY + Y E + TVPEI
Sbjct: 699 KQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEI 758
Query: 362 QRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGR 421
QR+SL VL LKSL + D+ + FDFLDPP E+L AL+QLY + A++ G +T+ GR
Sbjct: 759 QRTSLGNVVLLLKSLGIHDL--MHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGR 816
Query: 422 TMA 424
MA
Sbjct: 817 KMA 819
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 1065 (380.0 bits), Expect = 1.0e-107, P = 1.0e-107
Identities = 204/423 (48%), Positives = 284/423 (67%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPXXXX 61
+LP+ + E + GETGSGK+TQ+ Q L GYTK G+ I TQP
Sbjct: 402 SLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRRVA 461
Query: 62 XXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
+E+GV+LG EVGY+IRFED TSERT+++Y+TDG+LLRE LS PDL+ YSV+
Sbjct: 462 AMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVV 521
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
++DEAHER+L+TDIL GL+K + R +LK+L+ SATLD + S FF + P +PG+
Sbjct: 522 MVDEAHERTLHTDILFGLIKDVARFRP-ELKVLVASATLDTARFSTFFDDAPIFRIPGRR 580
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLD 241
+PV+I ++K YLE+ + + + IHV +P GD+L+F+TGQ++IE L+D+ R L
Sbjct: 581 FPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLG 640
Query: 242 EGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYV 301
+ ++LP++ +LP +MQ R+F P PP R+ +V+TNIAETSLT++G++YV+D G+
Sbjct: 641 S-KIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFC 699
Query: 302 KQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEI 361
KQ+ YNP +GM SL V SK ANQR GRAGR GKC+RLY + Y E + TVPEI
Sbjct: 700 KQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEI 759
Query: 362 QRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGR 421
QR+SL VL LKSL + D+ + FDFLDPP E+L AL+QLY + A++ G +T+ GR
Sbjct: 760 QRTSLGNVVLLLKSLGIHDL--MHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGR 817
Query: 422 TMA 424
MA
Sbjct: 818 KMA 820
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 1065 (380.0 bits), Expect = 1.0e-107, P = 1.0e-107
Identities = 203/422 (48%), Positives = 287/422 (68%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
+LPI Y + + +G+TGSGK+TQ+ Q LH GYTK G +G TQP
Sbjct: 403 SLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAA 462
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
QE+GV+LG EVGY+IRFED TS++T++KY+TDG+LLRE+L PDL+ YSV+I
Sbjct: 463 MSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLASYSVVI 522
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
+DEAHER+L+TDIL GLVK + R LK+LI+SAT+D EK S +F P + PG+ Y
Sbjct: 523 VDEAHERTLSTDILFGLVKDIARFRPD-LKLLISSATMDAEKFSDYFDTAPIFSFPGRRY 581
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVEI ++ Y+++A+ T + IHVREP GD+L+F TGQ++IE L+ +IR L
Sbjct: 582 PVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFFTGQEEIETAEEILKHRIRGLGT 641
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ +I P++ +LP E+Q ++F P P R+ +++TNIAETSLT+DG+ YV+D G+ K
Sbjct: 642 -KIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSK 700
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
+ YNP +GM SL + ISK A QR GRAGRT PGKCYRLY + Y+++ + TVPE+Q
Sbjct: 701 MKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQ 760
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R++LA VL LKSL + D+ + FDF+DPP +E+L +L+ L+ + A+++ G +T GR
Sbjct: 761 RTNLASVVLALKSLGIHDL--INFDFMDPPPAEALVKSLELLFALGALNKLGELTKAGRR 818
Query: 423 MA 424
MA
Sbjct: 819 MA 820
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 204/421 (48%), Positives = 286/421 (67%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LP+ + + +GETGSGK+TQL+Q LH GY+K G+IG TQP
Sbjct: 534 LPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGYSKRGMIGCTQPRRVAAM 593
Query: 64 XXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
E+ +LGE+VGYAIRFED TSERT+IKY+TDG+LLRE L +P+L YS II+
Sbjct: 594 SVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRESLRDPELDSYSAIIM 653
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYP 183
DEAHERSL+TD+L GL++ +V R LK+++TSAT+D K + FF N PT +PG+ +P
Sbjct: 654 DEAHERSLSTDVLFGLLREIV-ARRHDLKLIVTSATMDSSKFATFFGNVPTFTIPGRTFP 712
Query: 184 VEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEG 243
V+++ SK Y+ESA+K A+ +H+ EGD+LIFM GQ+DIE LE+++ +D
Sbjct: 713 VDVMFSKNTCEDYVESAVKQALQVHLTPNEGDMLIFMPGQEDIEVTCEVLEERLAEIDNA 772
Query: 244 SCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQ 303
+ ILP++ LP ++Q ++F R+ +V+TNIAETSLTVDG++YVID GY K
Sbjct: 773 PALS--ILPIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVIDSGYCKL 830
Query: 304 RQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQR 363
+ YNP GM +L + IS+ ANQR GRAGRT PG+ YRLY Y DE L +TVPEIQR
Sbjct: 831 KVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEIQR 890
Query: 364 SSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTM 423
++LA +VL LKSL + D+ L+F F+DPP +++ ++L QL+++ A+D G++T++GR M
Sbjct: 891 TNLANTVLLLKSLGVVDL--LQFHFMDPPPQDNILNSLYQLWILGALDHTGALTTLGRQM 948
Query: 424 A 424
A
Sbjct: 949 A 949
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 1063 (379.3 bits), Expect = 1.7e-107, P = 1.7e-107
Identities = 200/422 (47%), Positives = 287/422 (68%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
+LP+ + E + +GETGSGK+TQL+Q L G+ G+IG TQP
Sbjct: 541 SLPVFAFREQLIKAVKENQIMIVVGETGSGKTTQLTQYLAEAGFANEGVIGCTQPRRVAA 600
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E+G LG+EVGY IRFED TS T IKY+TDG+L REI+ +PDL YSVI+
Sbjct: 601 MSVAKRVSEEVGCELGQEVGYTIRFEDCTSPATRIKYMTDGMLQREIVIDPDLKRYSVIM 660
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER++ TD+L L+K+ R LKI++TSATLD +K S +F+ CP +PG+ +
Sbjct: 661 LDEAHERTIATDVLFALLKKATRRRPD-LKIIVTSATLDADKFSAYFNECPIFTIPGRTF 719
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVEIL+SK+ + YL++AL T + IH+ EP GD+L+F+TGQ++I+ L +++++L
Sbjct: 720 PVEILYSKDPESDYLDAALTTVMQIHIDEPPGDILLFLTGQEEIDTSCEILFERMKALGP 779
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
S + +ILP++ +LP EMQ R+F P PP R+ +++TNIAETS+T+D + YV+D G+VK
Sbjct: 780 -SVPELIILPVYSALPNEMQSRIFDPAPPGSRKVVIATNIAETSITIDHIYYVVDPGFVK 838
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q Y+P GM SL V IS+ QANQR GRAGRT PGKC+RLY Y E L ++PEIQ
Sbjct: 839 QNAYDPKLGMDSLVVTPISQAQANQRAGRAGRTGPGKCFRLYTEAAYQTEMLPTSIPEIQ 898
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R +L+ ++L LK++ ++D+ L FDF+DPP ++ AL++LY + A+D+ G +T +GR
Sbjct: 899 RQNLSNTILLLKAMGINDL--LHFDFMDPPPINTMLTALEELYALSALDDEGLLTRLGRK 956
Query: 423 MA 424
MA
Sbjct: 957 MA 958
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 1062 (378.9 bits), Expect = 2.1e-107, P = 2.1e-107
Identities = 203/423 (47%), Positives = 284/423 (67%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPXXXX 61
+LP+ + E + GETGSGK+TQ+ Q L GYT+ G+ I TQP
Sbjct: 402 SLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACTQPRRVA 461
Query: 62 XXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
+E+GV+LG EVGY+IRFED TSERT+++Y+TDG+LLRE LS PDL+ YSV+
Sbjct: 462 AMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVV 521
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
++DEAHER+L+TDIL GL+K + R +LK+L+ SATLD + S FF + P +PG+
Sbjct: 522 MVDEAHERTLHTDILFGLIKDVARFRP-ELKVLVASATLDTARFSTFFDDAPVFRIPGRR 580
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLD 241
+PV+I ++K YLE+ + + + IHV +P GD+L+F+TGQ++IE L+D+ R L
Sbjct: 581 FPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLG 640
Query: 242 EGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYV 301
+ ++LP++ +LP +MQ R+F P PP R+ +V+TNIAETSLT++G++YV+D G+
Sbjct: 641 S-KIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFC 699
Query: 302 KQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEI 361
KQ+ YNP +GM SL V SK ANQR GRAGR GKC+RLY + Y E + TVPEI
Sbjct: 700 KQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEI 759
Query: 362 QRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGR 421
QR+SL VL LKSL + D+ + FDFLDPP E+L AL+QLY + A++ G +T+ GR
Sbjct: 760 QRTSLGNVVLLLKSLGIHDL--MHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGR 817
Query: 422 TMA 424
MA
Sbjct: 818 KMA 820
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 1062 (378.9 bits), Expect = 2.1e-107, P = 2.1e-107
Identities = 203/423 (47%), Positives = 284/423 (67%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPXXXX 61
+LP+ + E + GETGSGK+TQ+ Q L GYT+ G+ I TQP
Sbjct: 402 SLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACTQPRRVA 461
Query: 62 XXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
+E+GV+LG EVGY+IRFED TSERT+++Y+TDG+LLRE LS PDL+ YSV+
Sbjct: 462 AMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVV 521
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
++DEAHER+L+TDIL GL+K + R +LK+L+ SATLD + S FF + P +PG+
Sbjct: 522 MVDEAHERTLHTDILFGLIKDVARFRP-ELKVLVASATLDTARFSTFFDDAPVFRIPGRR 580
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLD 241
+PV+I ++K YLE+ + + + IHV +P GD+L+F+TGQ++IE L+D+ R L
Sbjct: 581 FPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLG 640
Query: 242 EGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYV 301
+ ++LP++ +LP +MQ R+F P PP R+ +V+TNIAETSLT++G++YV+D G+
Sbjct: 641 S-KIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFC 699
Query: 302 KQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEI 361
KQ+ YNP +GM SL V SK ANQR GRAGR GKC+RLY + Y E + TVPEI
Sbjct: 700 KQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEI 759
Query: 362 QRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGR 421
QR+SL VL LKSL + D+ + FDFLDPP E+L AL+QLY + A++ G +T+ GR
Sbjct: 760 QRTSLGNVVLLLKSLGIHDL--MHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGR 817
Query: 422 TMA 424
MA
Sbjct: 818 KMA 820
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 1061 (378.5 bits), Expect = 2.7e-107, P = 2.7e-107
Identities = 205/423 (48%), Positives = 284/423 (67%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPXXXX 61
+LPI Y E + GETGSGK+TQ+ Q L GYTK G+ IG TQP
Sbjct: 411 SLPIFPYREDLLAAIGDHQILVIEGETGSGKTTQIPQYLLEEGYTKGGMKIGCTQPRRVA 470
Query: 62 XXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
QE+ V+LG EVGY+IRFED TSERT++KY+TDG+LLRE L+ PDL+ YSVI
Sbjct: 471 AMSVAARVAQEMSVKLGNEVGYSIRFEDCTSERTILKYMTDGMLLREFLTEPDLASYSVI 530
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
I+DEAHER+L+TDIL GL+K + R LK+L+ SATLD E+ S FF + P +PG+
Sbjct: 531 IIDEAHERTLHTDILFGLIKDIARFRPD-LKVLVASATLDTERFSSFFDDAPVFRIPGRR 589
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLD 241
+PV+I ++K YLE+ + + + IHV + GDVL+F+TGQ++IE L+++ R L
Sbjct: 590 FPVDIYYTKAPEADYLEACVVSVLQIHVTQSPGDVLVFLTGQEEIEACCELLQERCRRLG 649
Query: 242 EGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYV 301
+ ++LP++ +LP +MQ ++F+P PP R+ +V+TNIAETSLT+DG++YVID G+
Sbjct: 650 S-KISELLVLPIYANLPSDMQAKIFNPTPPGARKVVVATNIAETSLTIDGIIYVIDPGFC 708
Query: 302 KQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEI 361
KQ+ YN +GM SL V S+ ANQR GRAGR GKC+RLY + + E + TVPEI
Sbjct: 709 KQKSYNAKTGMESLIVTPCSRASANQRAGRAGRVAAGKCFRLYTAWAFKHEMEETTVPEI 768
Query: 362 QRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGR 421
QR++L VL LKSL ++D+ + FDF+DPP E+L AL+QLY + A++ G +T +GR
Sbjct: 769 QRTNLGNVVLLLKSLGINDL--IHFDFMDPPPHETLVLALEQLYALGALNHLGELTKLGR 826
Query: 422 TMA 424
MA
Sbjct: 827 RMA 829
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 1060 (378.2 bits), Expect = 3.5e-107, P = 3.5e-107
Identities = 204/424 (48%), Positives = 289/424 (68%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPXXXX 61
+LPI Y + +GETGSGK+TQL Q LH GYTK G+ +G TQP
Sbjct: 372 SLPIYVYRDEFLAALEQYQILVIVGETGSGKTTQLPQYLHEAGYTKDGMRVGCTQPRRVA 431
Query: 62 XXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
E+GV++G EVGY+IRFED TS++T++KY+TDG+LLRE ++ PDLS YS +
Sbjct: 432 AMSVAARVADEMGVKVGNEVGYSIRFEDNTSDKTILKYMTDGMLLREFMTEPDLSSYSAL 491
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
++DEAHER+++TDILL LVK L R LK+LI+SAT++ EK + +F + P N+PG+
Sbjct: 492 MIDEAHERTVHTDILLALVKDLARERKD-LKLLISSATMNAEKFASYFDDAPIFNIPGRR 550
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLD 241
YPV+I ++ +YL +A+ T IH +P+GD+LIF+TGQD+IE ++ + R L
Sbjct: 551 YPVDIYYTPAPEANYLSAAITTVFQIHTTQPKGDILIFLTGQDEIEAAEMQITETARKL- 609
Query: 242 EGSCM-DAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGY 300
GS + + VI P++ +LP E+Q ++F P P N R+ +++TNIAETSLT+DG+VYVID GY
Sbjct: 610 -GSRVKELVICPIYANLPSELQSKIFEPTPENARKVVLATNIAETSLTIDGIVYVIDPGY 668
Query: 301 VKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPE 360
VK+ YNP++GM +L VV S+ ANQR GRAGR PGKC+RLY Y +E + T PE
Sbjct: 669 VKENVYNPATGMSNLVVVPCSRASANQRSGRAGRVGPGKCFRLYTKYAYMNEMEESTTPE 728
Query: 361 IQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIG 420
IQR++L G VL LKSL ++++ L F+F+DPP +E+L AL QL+ + ++ G +T +G
Sbjct: 729 IQRTNLNGVVLQLKSLGINEL--LDFEFMDPPPTEALIGALNQLFALQGLNHKGELTKLG 786
Query: 421 RTMA 424
R MA
Sbjct: 787 RQMA 790
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 1059 (377.8 bits), Expect = 4.4e-107, P = 4.4e-107
Identities = 202/423 (47%), Positives = 283/423 (66%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPXXXX 61
+LP+ + E + GETGSGK+TQ+ Q L GYT G+ I TQP
Sbjct: 398 SLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVA 457
Query: 62 XXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
+E+GV+LG EVGY+IRFED TSERT+++Y+TDG+LLRE LS PDL+ YSV+
Sbjct: 458 AMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVV 517
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
++DEAHER+L+TDIL GL+K + R +LK+L+ SAT+D + S FF + P +PG+
Sbjct: 518 MVDEAHERTLHTDILFGLIKDVARFRP-ELKVLVASATMDTARFSTFFDDAPVFRIPGRR 576
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLD 241
+PV+I ++K YLE+ + + + IHV +P GD+L+F+TGQ++IE L+D+ R L
Sbjct: 577 FPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLG 636
Query: 242 EGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYV 301
+ ++LP++ +LP +MQ R+F P PP R+ +V+TNIAETSLT++G++YV+D G+
Sbjct: 637 S-KIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFC 695
Query: 302 KQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEI 361
KQ+ YNP +GM SL V SK ANQR GRAGR GKC+RLY + Y E + TVPEI
Sbjct: 696 KQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEI 755
Query: 362 QRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGR 421
QR+SL VL LKSL + D+ + FDFLDPP E+L AL+QLY + A++ G +T+ GR
Sbjct: 756 QRTSLGNVVLLLKSLGIHDL--MHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGR 813
Query: 422 TMA 424
MA
Sbjct: 814 KMA 816
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 1058 (377.5 bits), Expect = 5.7e-107, P = 5.7e-107
Identities = 198/422 (46%), Positives = 291/422 (68%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
+LP+ ++ + + +G+TGSGK+TQ++Q L G+ GIIG TQP
Sbjct: 576 SLPVYKFRQQLLEAVAENQLLIVVGDTGSGKTTQVTQYLAEAGWANKGIIGCTQPRRVAA 635
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E+G +LG EVGY IRFED TS T IKY+TDG+L RE+L +PDL YSVI+
Sbjct: 636 MSVAKRVAEEVGCKLGAEVGYTIRFEDCTSPETKIKYMTDGMLQREVLLDPDLKKYSVIM 695
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER++ TD+L GL+K + R L++++TSATLD +K S++F CP ++PG+ +
Sbjct: 696 LDEAHERTIATDVLFGLLKTTLKRRPD-LRLIVTSATLDADKFSEYFYGCPIFSIPGRTF 754
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVEI++SKE + YL++AL T + IH+ EP GD+L+F+TGQ++I+ L +++++L
Sbjct: 755 PVEIMYSKEPESDYLDAALITVMQIHLTEPPGDMLLFLTGQEEIDTACEILYERMKALGP 814
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
S + VILP++ +LP EMQ R+F P PP R+ +++TNIAETS+T+D + YVID G+VK
Sbjct: 815 -SVPELVILPVYSALPSEMQSRIFDPAPPGGRKVVIATNIAETSITIDNIYYVIDPGFVK 873
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q+ Y+P GM SL V IS+ QA QR GRAGRT PGKC+RLY Y E L T+P+IQ
Sbjct: 874 QKAYDPKLGMDSLVVTPISQAQAKQRAGRAGRTGPGKCFRLYTEAAYQSEMLPTTIPDIQ 933
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R +L+ ++L LK++ ++D+ L FDF+DPP + ++ AL++LY + A+D+ G +T +GR
Sbjct: 934 RQNLSHTILMLKAMGINDL--LHFDFMDPPPTNTMLTALEELYALSALDDEGLLTRLGRK 991
Query: 423 MA 424
MA
Sbjct: 992 MA 993
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 1058 (377.5 bits), Expect = 5.7e-107, P = 5.7e-107
Identities = 197/422 (46%), Positives = 288/422 (68%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPXXXXX 62
LPI Q+ + I +GETGSGK+TQL Q LH GYTK+G+ +G TQP
Sbjct: 481 LPIYQFRDQIIQAVHDHQVLIIVGETGSGKTTQLPQYLHEAGYTKNGMKVGCTQPRRVAA 540
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E+GV+LG EVGY+IRFED TS++T++KY+TDG+LLRE+L+ PDL YS ++
Sbjct: 541 MSVAARVAEEMGVKLGNEVGYSIRFEDNTSDKTVLKYMTDGMLLRELLTEPDLGQYSALM 600
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
+DEAHER++ TDI GL+K + R LK+LI+SAT+D +K +F N P N+PG++Y
Sbjct: 601 IDEAHERTVPTDIACGLLKDIAKARPD-LKLLISSATMDAQKFQSYFDNAPIFNIPGRMY 659
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
V+I ++++ +YL +A+ T IHV + GD+L+F+TGQ++IE L++ R L
Sbjct: 660 NVDIHYTQQPEANYLAAAITTVFQIHVSQGPGDILVFLTGQEEIEAAEQSLQETARKLGN 719
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ +I P++ +LP ++Q ++F P PP R+ +++TNIAETSLT+DG+VYVID G+VK
Sbjct: 720 -KIPEMIICPIYANLPSDLQAKIFEPTPPKARKVVLATNIAETSLTIDGIVYVIDPGFVK 778
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
+ +NP +GM SL V S+ ANQR GRAGR PGKC+RLY Y++E + T PEIQ
Sbjct: 779 ENVFNPRTGMESLVVTPCSRASANQRAGRAGRVGPGKCFRLYTKWAYYNELEESTTPEIQ 838
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R++L+ +L LKSL + + L+FDF+DPP +E++ AL+QLY + A+++ G +T IGR
Sbjct: 839 RTNLSSVILMLKSLGIDQL--LEFDFMDPPPAETIIRALEQLYALGALNDRGELTKIGRQ 896
Query: 423 MA 424
MA
Sbjct: 897 MA 898
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 1058 (377.5 bits), Expect = 5.7e-107, P = 5.7e-107
Identities = 204/422 (48%), Positives = 291/422 (68%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
+LPI E IGETGSGK+TQ++Q L GY G IG TQP
Sbjct: 507 SLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTRGKIGCTQPRRVAA 566
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E G +LG+EVGYAIRFED TS T+IK++TDG+LLRE L +P+LS YSVII
Sbjct: 567 MSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECLLDPNLSAYSVII 626
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+++TD+L GL+K+ + R +LK+LITSATL+ EK SK+F N +PG+ +
Sbjct: 627 LDEAHERTISTDVLFGLLKQALQ-RRPELKVLITSATLEAEKFSKYFMNAQLFIIPGRTF 685
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PV+I ++K+ YL+++L T + IH+ EP GD+L+F+TGQ++I+ L ++++SL
Sbjct: 686 PVDIRYTKDPEADYLDASLITVMQIHLSEPPGDILLFLTGQEEIDAACQILYERMKSLGS 745
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ D +ILP++ +LP EMQ ++F P PP R+ +++TNIAETSLT+DG+ YVID G+ K
Sbjct: 746 -NVPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFSK 804
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q+ +NP +GM SL V IS+ A QR GRAGRT PGKCYRLY + + +E L ++PEIQ
Sbjct: 805 QKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKNEMLASSIPEIQ 864
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R++L +VL +K++ ++D+ L FDF+DPP ++L A++QLY + A+DE G +T +GR
Sbjct: 865 RTNLGNTVLTMKAMGINDL--LNFDFMDPPPVQTLVSAMEQLYSLGALDEEGLLTRLGRK 922
Query: 423 MA 424
MA
Sbjct: 923 MA 924
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 1051 (375.0 bits), Expect = 3.1e-106, P = 3.1e-106
Identities = 203/420 (48%), Positives = 282/420 (67%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LPI ++ + +GETGSGK+TQL+Q LH GYT G+IG TQP
Sbjct: 532 LPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAM 591
Query: 64 XXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
+E+G LGEEVGYAIRFED TSE TLIKY+TDG+LLRE L DL YS II+
Sbjct: 592 SVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIM 651
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYP 183
DEAHERSLNTD+L GL++ +V R S LK+++TSAT+D EK + FF N P ++PG+ +P
Sbjct: 652 DEAHERSLNTDVLFGLLREVV-ARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFP 710
Query: 184 VEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEG 243
V+IL SK Y+E+A+K ++ +H+ GD+LIFM GQ+DIE ++ + + L+
Sbjct: 711 VDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENA 770
Query: 244 SCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQ 303
+ +LP++ LP ++Q ++F P R+ IV+TNIAETSLTVDG+++VID GY K
Sbjct: 771 PAL--AVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKL 828
Query: 304 RQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQR 363
+ +NP GM +L + IS+ ANQR GRAGRT PG+C+RLY + Y +E L TVPEIQR
Sbjct: 829 KVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQR 888
Query: 364 SSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTM 423
++LA VL LKSL + D+ L+F F+DPP +++ +++ QL+++ A+D G +TS GR M
Sbjct: 889 TNLANVVLLLKSLGVQDL--LQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLM 946
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 1051 (375.0 bits), Expect = 3.1e-106, P = 3.1e-106
Identities = 203/420 (48%), Positives = 282/420 (67%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LPI ++ + +GETGSGK+TQL+Q LH GYT G+IG TQP
Sbjct: 532 LPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAM 591
Query: 64 XXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
+E+G LGEEVGYAIRFED TSE TLIKY+TDG+LLRE L DL YS II+
Sbjct: 592 SVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIM 651
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYP 183
DEAHERSLNTD+L GL++ +V R S LK+++TSAT+D EK + FF N P ++PG+ +P
Sbjct: 652 DEAHERSLNTDVLFGLLREVV-ARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFP 710
Query: 184 VEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEG 243
V+IL SK Y+E+A+K ++ +H+ GD+LIFM GQ+DIE ++ + + L+
Sbjct: 711 VDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENA 770
Query: 244 SCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQ 303
+ +LP++ LP ++Q ++F P R+ IV+TNIAETSLTVDG+++VID GY K
Sbjct: 771 PAL--AVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKL 828
Query: 304 RQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQR 363
+ +NP GM +L + IS+ ANQR GRAGRT PG+C+RLY + Y +E L TVPEIQR
Sbjct: 829 KVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQR 888
Query: 364 SSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTM 423
++LA VL LKSL + D+ L+F F+DPP +++ +++ QL+++ A+D G +TS GR M
Sbjct: 889 TNLANVVLLLKSLGVQDL--LQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLM 946
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 1051 (375.0 bits), Expect = 3.1e-106, P = 3.1e-106
Identities = 203/420 (48%), Positives = 282/420 (67%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LPI ++ + +GETGSGK+TQL+Q LH GYT G+IG TQP
Sbjct: 71 LPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAM 130
Query: 64 XXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
+E+G LGEEVGYAIRFED TSE TLIKY+TDG+LLRE L DL YS II+
Sbjct: 131 SVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIM 190
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYP 183
DEAHERSLNTD+L GL++ +V R S LK+++TSAT+D EK + FF N P ++PG+ +P
Sbjct: 191 DEAHERSLNTDVLFGLLREVV-ARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFP 249
Query: 184 VEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEG 243
V+IL SK Y+E+A+K ++ +H+ GD+LIFM GQ+DIE ++ + + L+
Sbjct: 250 VDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENA 309
Query: 244 SCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQ 303
+ +LP++ LP ++Q ++F P R+ IV+TNIAETSLTVDG+++VID GY K
Sbjct: 310 PAL--AVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKL 367
Query: 304 RQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQR 363
+ +NP GM +L + IS+ ANQR GRAGRT PG+C+RLY + Y +E L TVPEIQR
Sbjct: 368 KVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQR 427
Query: 364 SSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTM 423
++LA VL LKSL + D+ L+F F+DPP +++ +++ QL+++ A+D G +TS GR M
Sbjct: 428 TNLANVVLLLKSLGVQDL--LQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLM 485
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 1050 (374.7 bits), Expect = 4.0e-106, P = 4.0e-106
Identities = 202/420 (48%), Positives = 282/420 (67%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LPI ++ + +GETGSGK+TQL+Q LH GYT G+IG TQP
Sbjct: 531 LPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAM 590
Query: 64 XXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
+E+G LGEEVGYAIRFED TSE TLIKY+TDG+LLRE L DL YS +I+
Sbjct: 591 SVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAVIM 650
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYP 183
DEAHERSLNTD+L GL++ +V R S LK+++TSAT+D EK + FF N P ++PG+ +P
Sbjct: 651 DEAHERSLNTDVLFGLLREVV-ARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFP 709
Query: 184 VEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEG 243
V+IL SK Y+E+A+K ++ +H+ GD+LIFM GQ+DIE ++ + + L+
Sbjct: 710 VDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENA 769
Query: 244 SCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQ 303
+ +LP++ LP ++Q ++F P R+ IV+TNIAETSLTVDG+++VID GY K
Sbjct: 770 PAL--AVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKL 827
Query: 304 RQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQR 363
+ +NP GM +L + IS+ ANQR GRAGRT PG+C+RLY + Y +E L TVPEIQR
Sbjct: 828 KVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQR 887
Query: 364 SSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTM 423
++LA VL LKSL + D+ L+F F+DPP +++ +++ QL+++ A+D G +TS GR M
Sbjct: 888 TNLANVVLLLKSLGVQDL--LQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLM 945
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 1049 (374.3 bits), Expect = 5.1e-106, P = 5.1e-106
Identities = 202/420 (48%), Positives = 283/420 (67%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LPI ++ + +GETGSGK+TQL+Q LH+ GYT G+IG TQP
Sbjct: 533 LPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHQDGYTDYGMIGCTQPRRVAAM 592
Query: 64 XXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
+E+G LGEEVGYAIRFED TSE TLIKY+TDG+LLRE L DL YS II+
Sbjct: 593 SVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIM 652
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYP 183
DEAHERSLNTD+L GL++ +V R S LK+++TSAT+D +K + FF N P ++PG+ +P
Sbjct: 653 DEAHERSLNTDVLFGLLREVV-ARRSDLKLIVTSATMDADKFAAFFGNVPIFHIPGRTFP 711
Query: 184 VEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEG 243
V+IL SK Y+E+A+K ++ +H+ GD+LIFM GQ+DIE ++ + + L+
Sbjct: 712 VDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENA 771
Query: 244 SCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQ 303
+ +LP++ LP ++Q ++F P R+ IV+TNIAETSLTVDG+++VID GY K
Sbjct: 772 PAL--AVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKL 829
Query: 304 RQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQR 363
+ +NP GM +L + IS+ ANQR GRAGRT PG+C+RLY + Y +E L TVPEIQR
Sbjct: 830 KVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQR 889
Query: 364 SSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTM 423
++LA VL LKSL + D+ L+F F+DPP +++ +++ QL+++ A+D G +TS GR M
Sbjct: 890 TNLANVVLLLKSLGVQDL--LQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLM 947
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 1048 (374.0 bits), Expect = 6.5e-106, P = 6.5e-106
Identities = 206/422 (48%), Positives = 286/422 (67%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
+LPI + + + IGETGSGK+TQ++Q L G+T G IG TQP
Sbjct: 585 SLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARGKIGCTQPRRVAA 644
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E G RLG+EVGY IRFED TS T+IKY+TDG+LLRE L +L YSVI+
Sbjct: 645 MSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAELKSYSVIM 704
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+++TD+L GL+K V R +LK+++TSATLD K S++F P +PG+ +
Sbjct: 705 LDEAHERTIHTDVLFGLLKTAVQKRP-ELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTF 763
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVE+L++KE T YL+++L T + IH+REP GD+L+F+TGQ++I+ L ++++SL
Sbjct: 764 PVEVLYTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGP 823
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ +ILP++ +LP EMQ R+F P P R+ +++TNIAETSLT+DG+ YV+D G+VK
Sbjct: 824 -DVPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVK 882
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q+ YN +GM SL V IS+ A QR GRAGRT PGK YRLY Y DE L VPEIQ
Sbjct: 883 QKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQ 942
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R++LA +VL LK++ ++D+ L FDF+D P ESL AL+QL+ + A+D+ G +T +GR
Sbjct: 943 RTNLATTVLQLKTMGINDL--LHFDFMDAPPVESLVMALEQLHSLSALDDEGLLTRLGRR 1000
Query: 423 MA 424
MA
Sbjct: 1001 MA 1002
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 1048 (374.0 bits), Expect = 6.5e-106, P = 6.5e-106
Identities = 208/423 (49%), Positives = 283/423 (66%)
Query: 2 ANLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXX 61
+ LPI + + IGETGSGK+TQ+ Q LH YT+ GI+G TQP
Sbjct: 629 SKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTEKGIVGCTQPRRVA 688
Query: 62 XXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
+E G LG+EVGY+IRF+D TS T+IKYLTDG+LLRE LS+ L+ YS I
Sbjct: 689 AMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETLSDTLLTKYSFI 748
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
ILDEAHER+++TDIL L+K +V RA K+++TSATLD EK S +F N P +PGK+
Sbjct: 749 ILDEAHERTISTDILFCLLKDVVRKRAD-FKLIVTSATLDAEKFSTYFFNSPIFTIPGKI 807
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLD 241
+PVEILHSKE + Y+E++L T ++IH+ E GD+L+F+TGQD+I L ++++ L+
Sbjct: 808 FPVEILHSKEPESDYVEASLITVLNIHLNEHPGDILVFLTGQDEINTACEILHERMKKLE 867
Query: 242 EGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYV 301
S +ILP++ SLP EMQ +F P PP CR+ I++TNIAE SLT+DG+ +VID G+
Sbjct: 868 SMSPPPLIILPIYSSLPSEMQSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFC 927
Query: 302 KQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEI 361
K ++Y+ M SL V ISK A QR GRAGRT PGKCYRLY Y +E +++VPEI
Sbjct: 928 KIKKYDSKRDMDSLIVAPISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMSVPEI 987
Query: 362 QRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGR 421
QR +L VL LK+L ++D L FDF+D PS E+L +L+ LY + A+D+NG +T +G+
Sbjct: 988 QRINLGSIVLLLKALGINDF--LHFDFMDSPSVETLIHSLENLYYLGALDDNGYLTKLGK 1045
Query: 422 TMA 424
MA
Sbjct: 1046 KMA 1048
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 1048 (374.0 bits), Expect = 6.5e-106, P = 6.5e-106
Identities = 208/423 (49%), Positives = 283/423 (66%)
Query: 2 ANLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXX 61
+ LPI + + IGETGSGK+TQ+ Q LH YT+ GI+G TQP
Sbjct: 629 SKLPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTEKGIVGCTQPRRVA 688
Query: 62 XXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
+E G LG+EVGY+IRF+D TS T+IKYLTDG+LLRE LS+ L+ YS I
Sbjct: 689 AMSIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETLSDTLLTKYSFI 748
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
ILDEAHER+++TDIL L+K +V RA K+++TSATLD EK S +F N P +PGK+
Sbjct: 749 ILDEAHERTISTDILFCLLKDVVRKRAD-FKLIVTSATLDAEKFSTYFFNSPIFTIPGKI 807
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLD 241
+PVEILHSKE + Y+E++L T ++IH+ E GD+L+F+TGQD+I L ++++ L+
Sbjct: 808 FPVEILHSKEPESDYVEASLITVLNIHLNEHPGDILVFLTGQDEINTACEILHERMKKLE 867
Query: 242 EGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYV 301
S +ILP++ SLP EMQ +F P PP CR+ I++TNIAE SLT+DG+ +VID G+
Sbjct: 868 SMSPPPLIILPIYSSLPSEMQSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFC 927
Query: 302 KQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEI 361
K ++Y+ M SL V ISK A QR GRAGRT PGKCYRLY Y +E +++VPEI
Sbjct: 928 KIKKYDSKRDMDSLIVAPISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMSVPEI 987
Query: 362 QRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGR 421
QR +L VL LK+L ++D L FDF+D PS E+L +L+ LY + A+D+NG +T +G+
Sbjct: 988 QRINLGSIVLLLKALGINDF--LHFDFMDSPSVETLIHSLENLYYLGALDDNGYLTKLGK 1045
Query: 422 TMA 424
MA
Sbjct: 1046 KMA 1048
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 1046 (373.3 bits), Expect = 1.1e-105, P = 1.1e-105
Identities = 197/425 (46%), Positives = 290/425 (68%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG----IIGVTQPXX 59
LP+ + +GETGSGK+TQ+ Q ++ G K G +IG TQP
Sbjct: 336 LPVYAMRSQLLEAIRDNQFVVIVGETGSGKTTQIVQYIYEEGMNKVGGQTKLIGCTQPRR 395
Query: 60 XXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYS 119
+E+G +LG+ VGY IRFED TSE T+IKY+TDG+L RE L++P+++ YS
Sbjct: 396 VAAESVAKRVSEEVGCKLGDTVGYTIRFEDVTSENTVIKYMTDGMLEREALNDPNMNRYS 455
Query: 120 VIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPG 179
VI+LDEAHER++ TD+L L+K + LK+++TSATLD K S++F+NCP + +PG
Sbjct: 456 VIMLDEAHERTIATDVLFALLKNAAKQNPN-LKVIVTSATLDSNKFSRYFNNCPIITIPG 514
Query: 180 KLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRS 239
+ +PVE+L++K YL +AL++ I IHV EP GD+L+F+TGQ++IE L ++++
Sbjct: 515 RTFPVEVLYTKAPEMDYLAAALESVIQIHVSEPAGDILVFLTGQEEIETSCEALHERMKL 574
Query: 240 LDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCG 299
L E + + +ILP++ +LP EMQ R+F P PP R+ I++TNIAETS+T+DG+ YV+D G
Sbjct: 575 LGE-NIPELIILPVYSALPSEMQTRIFEPTPPGSRKVILATNIAETSITIDGIYYVVDPG 633
Query: 300 YVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVP 359
+VK Y+ GM SL V ISK QANQR GRAGRT PGKCYRLY Y E + T+P
Sbjct: 634 FVKINMYDSKLGMDSLRVTPISKAQANQRSGRAGRTGPGKCYRLYTEQAYEKEMIPNTIP 693
Query: 360 EIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSI 419
EIQR +L+ ++L LK++ + D+ + F+F+DPPS+ ++ AL+ LY++DA+D++G++T++
Sbjct: 694 EIQRQNLSHTILMLKAMGIHDL--VNFEFMDPPSTTTMLTALEDLYILDALDDDGNLTTL 751
Query: 420 GRTMA 424
GR MA
Sbjct: 752 GRKMA 756
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 1044 (372.6 bits), Expect = 1.7e-105, P = 1.7e-105
Identities = 189/422 (44%), Positives = 291/422 (68%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
+LP+ Y E + +GETGSGK+TQ+ Q LH G++K+G IG TQP
Sbjct: 466 SLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGKIGCTQPRRVAA 525
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E+G +LG EVGY+IRFED TS++T+++Y+TDG+L+RE L+ PDL+ YSV+I
Sbjct: 526 MSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFLTAPDLASYSVLI 585
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
+DEAHER+L+TDIL GL+K + R LK+LI+SAT+D E+ S +F PT N+PG+ Y
Sbjct: 586 IDEAHERTLHTDILFGLLKDITRFRPD-LKLLISSATMDAERFSDYFDGAPTFNIPGRKY 644
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
V +++ YL++A+ T + IH+ EP GD+L+F+TGQ+++++ L+ + R L
Sbjct: 645 EVTTHYTQAPEADYLDAAVVTVLQIHITEPLGDILVFLTGQEEVDQAAEMLQTRTRGLGT 704
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ +I ++ +LP ++Q ++F P PPN R+ +++TNIAETSLT+DG++YVID G+ K
Sbjct: 705 -KIKELIITRIYSTLPTDLQAKIFEPTPPNARKVVLATNIAETSLTIDGIIYVIDPGFCK 763
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q+ +NP +GM SL + +S+ ANQR GRAGR PGKC+RL+ + + +E + T+PEIQ
Sbjct: 764 QKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPGKCFRLFTAWAFDNELEENTIPEIQ 823
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R++L VL LKS+ ++D+ + FDF+DPP +++L AL+QLY + A+++ G +T +GR
Sbjct: 824 RTNLGNVVLLLKSMGINDL--MNFDFMDPPPAQTLIAALEQLYALGALNDRGQLTKLGRK 881
Query: 423 MA 424
MA
Sbjct: 882 MA 883
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 1041 (371.5 bits), Expect = 3.6e-105, P = 3.6e-105
Identities = 205/424 (48%), Positives = 286/424 (67%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPXXXX 61
+LP+ QY++ + + ETGSGK+TQL Q LH GYTK I TQP
Sbjct: 417 SLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKICCTQPRRVA 476
Query: 62 XXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
+E+ VRLG+EVGY+IRFE+ TSE+T+IKYLTDG+LLRE L+ PDL+ YSVI
Sbjct: 477 AMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEPDLASYSVI 536
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
I+DEAHER+L+TDIL GLVK + R LK+LI+SAT+D EK S +F P VPG+
Sbjct: 537 IIDEAHERTLHTDILFGLVKDIARFRPD-LKVLISSATIDAEKFSAYFDEAPVFYVPGRR 595
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLD 241
YPV+I ++ + +Y+++A+ T + IH +P GD+L+F+TGQD+IE + +++ R L
Sbjct: 596 YPVDIYYTPQPEANYIQAAITTILQIHTTQPAGDILVFLTGQDEIELMSENMQELCRIL- 654
Query: 242 EGSCMDAVIL-PLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGY 300
G + +IL P++ +LP E+Q ++F P PP R+ +++TNIAETS+T+DGV +VID G+
Sbjct: 655 -GKRIPEIILCPIYANLPSELQAKIFDPTPPGARKVVLATNIAETSITIDGVNFVIDSGF 713
Query: 301 VKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPE 360
VKQ YNP +GM SL V S+ A+QR GRAGR PGKC+RLY Y++E VT PE
Sbjct: 714 VKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTRRTYNNELDMVTSPE 773
Query: 361 IQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIG 420
IQR++L VL LKSL ++ N+L FDF+D P E+L +L+ LY + A++ G +T +G
Sbjct: 774 IQRTNLTNIVLLLKSLGIN--NLLDFDFMDAPPPETLMRSLELLYALGALNNRGELTKLG 831
Query: 421 RTMA 424
R MA
Sbjct: 832 RQMA 835
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 1039 (370.8 bits), Expect = 5.8e-105, P = 5.8e-105
Identities = 202/422 (47%), Positives = 287/422 (68%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTK-SGIIGVTQPXXXXX 62
LP+ + + +GETGSGK+TQ++Q L GYT S +IG TQP
Sbjct: 510 LPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIGCTQPRRVAA 569
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E+G R+GEEVGY IRFED+TS T IKY+TDG+L RE L +P LS YSVII
Sbjct: 570 MSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVDPLLSKYSVII 629
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER++ TD+L GL+K V L+ LK+++TSATLD E+ S +F CP +PG+ Y
Sbjct: 630 LDEAHERTVATDVLFGLLKGTV-LKRPDLKLIVTSATLDAERFSSYFYKCPIFTIPGRSY 688
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVEI+++K+ YL++AL T + IH+ E GD+L+F+TGQ++I+ L ++ + L +
Sbjct: 689 PVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSCEILYERSKMLGD 748
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
S + VILP++ +LP E+Q R+F P PP R+ +++TNIAETSLT+DG+ YV+D G+VK
Sbjct: 749 -SIPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVDPGFVK 807
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q ++P GM SL V IS+ QA QR GRAGRT PGKCYRLY + Y +E L +PEIQ
Sbjct: 808 QSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYRNEMLPSPIPEIQ 867
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R +L+ ++L LK++ ++D+ L FDF+DPP ++++ AL+ LY + A+D+ G +T +GR
Sbjct: 868 RQNLSHTILMLKAMGINDL--LNFDFMDPPPAQTMIAALQNLYALSALDDEGLLTPLGRK 925
Query: 423 MA 424
MA
Sbjct: 926 MA 927
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 1039 (370.8 bits), Expect = 5.8e-105, P = 5.8e-105
Identities = 198/420 (47%), Positives = 282/420 (67%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LPI + + +GETGSGK+TQL+Q LH GYT G++G TQP
Sbjct: 563 LPIFAVRQQLLNIIRDNNIVIVVGETGSGKTTQLTQYLHEDGYTSYGMVGCTQPRRVAAM 622
Query: 64 XXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
+E+ LGEEVGYAIRFED TSE+T+IKY+TDG+LLRE L DL YS +I+
Sbjct: 623 SVAKRVSEEMNSNLGEEVGYAIRFEDCTSEKTMIKYMTDGILLRESLRESDLDHYSAVIM 682
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYP 183
DEAHERSLNTD+L GL++ +V+ R S LK+++TSAT+D +K + FF N P ++PG+ +P
Sbjct: 683 DEAHERSLNTDVLFGLLREVVS-RRSDLKLIVTSATMDSDKFASFFGNVPIFHIPGRTFP 741
Query: 184 VEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEG 243
V+IL SK Y+E+A+K A+ IH+ GD+LIFM GQ+DIE ++ +++ L+
Sbjct: 742 VDILFSKTPQEDYVEAAVKQALQIHLSGMVGDILIFMPGQEDIEVTSDQIVERLADLENA 801
Query: 244 SCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQ 303
+ +LP++ LP ++Q ++F P R+ IV+TNIAETSLTVDG+++V+D GY K
Sbjct: 802 PAL--AVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVVDSGYCKL 859
Query: 304 RQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQR 363
+ +NP GM +L V IS+ ANQR GRAGRT PG+CYRLY + + +E L T+PEIQR
Sbjct: 860 KVFNPRIGMDALQVYPISQANANQRAGRAGRTGPGQCYRLYTQSAFKNEMLTTTIPEIQR 919
Query: 364 SSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTM 423
++LA VL LKSL + D+ L F F+DPP +++ +++ QL+++ A+D G++T GR M
Sbjct: 920 TNLANVVLLLKSLGVQDL--LLFHFMDPPPEDNMLNSMYQLWILGALDNTGALTPTGRLM 977
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 1024 (365.5 bits), Expect = 2.3e-103, P = 2.3e-103
Identities = 198/421 (47%), Positives = 282/421 (66%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LP+ + + +GETGSGK+TQL+Q L G+ SG+IG TQP
Sbjct: 441 LPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSGLIGCTQPRRVAAM 500
Query: 64 XXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
E+GV LG++VGYAIRFED TSE+T+IKY+TDG+LLRE L + L YS II+
Sbjct: 501 SVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSLDQYSAIIM 560
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFS-NCPTLNVPGKLY 182
DEAHERSLNTD+L GL++ ++ RA LK+++TSAT+D +K + FF NCPT +PG+ +
Sbjct: 561 DEAHERSLNTDVLFGLLREVIAKRAD-LKLIVTSATMDADKFADFFGGNCPTFTIPGRTF 619
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVE+ H++ Y+++A+K A+ IH+ +GD+LIFM GQ+DIE +++K+ LDE
Sbjct: 620 PVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDIECTCEMIKEKLGELDE 679
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ +LP++ LP ++Q ++F P R+ IV+TNIAETSLTVDG+++VID G+ K
Sbjct: 680 APPL--AVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILFVIDPGFCK 737
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
+ YNP GM +L + +S+ ANQR GRAGRT PG+CYRLY + DE L TVPEIQ
Sbjct: 738 MKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDELLKSTVPEIQ 797
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R++LA VL LKSL + D+ LKF F+D P +++ +++ QL+ + A+D G +T +GR
Sbjct: 798 RTNLANVVLLLKSLGVDDL--LKFHFMDAPPQDNMLNSMYQLWTLGALDNTGQLTPMGRK 855
Query: 423 M 423
M
Sbjct: 856 M 856
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 1024 (365.5 bits), Expect = 2.3e-103, P = 2.3e-103
Identities = 198/421 (47%), Positives = 282/421 (66%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LP+ + + +GETGSGK+TQL+Q L G+ SG+IG TQP
Sbjct: 441 LPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSGLIGCTQPRRVAAM 500
Query: 64 XXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
E+GV LG++VGYAIRFED TSE+T+IKY+TDG+LLRE L + L YS II+
Sbjct: 501 SVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSLDQYSAIIM 560
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFS-NCPTLNVPGKLY 182
DEAHERSLNTD+L GL++ ++ RA LK+++TSAT+D +K + FF NCPT +PG+ +
Sbjct: 561 DEAHERSLNTDVLFGLLREVIAKRAD-LKLIVTSATMDADKFADFFGGNCPTFTIPGRTF 619
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVE+ H++ Y+++A+K A+ IH+ +GD+LIFM GQ+DIE +++K+ LDE
Sbjct: 620 PVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDIECTCEMIKEKLGELDE 679
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ +LP++ LP ++Q ++F P R+ IV+TNIAETSLTVDG+++VID G+ K
Sbjct: 680 APPL--AVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILFVIDPGFCK 737
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
+ YNP GM +L + +S+ ANQR GRAGRT PG+CYRLY + DE L TVPEIQ
Sbjct: 738 MKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDELLKSTVPEIQ 797
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R++LA VL LKSL + D+ LKF F+D P +++ +++ QL+ + A+D G +T +GR
Sbjct: 798 RTNLANVVLLLKSLGVDDL--LKFHFMDAPPQDNMLNSMYQLWTLGALDNTGQLTPMGRK 855
Query: 423 M 423
M
Sbjct: 856 M 856
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 1023 (365.2 bits), Expect = 2.9e-103, P = 2.9e-103
Identities = 200/422 (47%), Positives = 285/422 (67%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
+LPI ++ + +GETGSGK+TQ++Q G + G IG TQP
Sbjct: 539 SLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRRVAA 598
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E G +LG +VGY IRFED TS+ T+IKY+TDG+LLRE L +PDLS YS+I+
Sbjct: 599 MSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIM 658
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+++TD+L GL+K R +LK++ITSATLD K S++F P +PG+ +
Sbjct: 659 LDEAHERTIHTDVLFGLLKAAARKRP-ELKLIITSATLDSVKFSEYFLEAPIFTIPGRTF 717
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVEIL+++E + YLE+A T + IH+ EP GDVL+F+TGQ++I+ L ++++S+
Sbjct: 718 PVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGP 777
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ +ILP++G+LP EMQ R+F P P R+ +++TNIAETSLT+DG+ YV+D G+VK
Sbjct: 778 -DVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVK 836
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q+ YNP SGM SL V IS+ A QR GRAGRT PGKCYRLY + DE L VPEIQ
Sbjct: 837 QKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQ 896
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R++LA ++L LK++ ++ N++ FDF+D P +S+ AL L+ + A+D +G +T +GR
Sbjct: 897 RTNLASTLLQLKAMGIN--NLIDFDFMDAPPLDSMITALNTLHTLSALDGDGLLTKLGRR 954
Query: 423 MA 424
MA
Sbjct: 955 MA 956
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 1023 (365.2 bits), Expect = 2.9e-103, P = 2.9e-103
Identities = 200/422 (47%), Positives = 285/422 (67%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
+LPI ++ + +GETGSGK+TQ++Q G + G IG TQP
Sbjct: 539 SLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRRVAA 598
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E G +LG +VGY IRFED TS+ T+IKY+TDG+LLRE L +PDLS YS+I+
Sbjct: 599 MSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIM 658
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+++TD+L GL+K R +LK++ITSATLD K S++F P +PG+ +
Sbjct: 659 LDEAHERTIHTDVLFGLLKAAARKRP-ELKLIITSATLDSVKFSEYFLEAPIFTIPGRTF 717
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVEIL+++E + YLE+A T + IH+ EP GDVL+F+TGQ++I+ L ++++S+
Sbjct: 718 PVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGP 777
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ +ILP++G+LP EMQ R+F P P R+ +++TNIAETSLT+DG+ YV+D G+VK
Sbjct: 778 -DVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVK 836
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q+ YNP SGM SL V IS+ A QR GRAGRT PGKCYRLY + DE L VPEIQ
Sbjct: 837 QKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQ 896
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R++LA ++L LK++ ++ N++ FDF+D P +S+ AL L+ + A+D +G +T +GR
Sbjct: 897 RTNLASTLLQLKAMGIN--NLIDFDFMDAPPLDSMITALNTLHTLSALDGDGLLTKLGRR 954
Query: 423 MA 424
MA
Sbjct: 955 MA 956
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 1015 (362.4 bits), Expect = 2.0e-102, P = 2.0e-102
Identities = 193/399 (48%), Positives = 275/399 (68%)
Query: 26 IGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAI 85
+GETGSGK+TQL Q L+ GY+K G IG TQP +E+ V LG EVGY+I
Sbjct: 681 VGETGSGKTTQLVQYLYEDGYSKFGKIGCTQPRRVAAVSVAKRVSEEMSVTLGNEVGYSI 740
Query: 86 RFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVN 145
RFED TS T IKY+TDG+LLRE ++P+L YS II+DEAHERSLNTD+L G++K++++
Sbjct: 741 RFEDCTSNETAIKYMTDGILLRESFNDPNLDKYSAIIMDEAHERSLNTDVLFGILKKVMS 800
Query: 146 LRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERPTSYLESALKTAI 205
R +K+++TSAT+D +K S FF + P +PG+ +PV++L SK Y++SA+K +
Sbjct: 801 RRYD-MKLIVTSATMDSKKFSMFFGDVPVFTIPGRTFPVDVLWSKTPCEDYVDSAVKQIL 859
Query: 206 DIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRV 265
IHV + GD+L+FMTGQ+DIE + +E++I+ L +LP++ LP +MQ ++
Sbjct: 860 SIHVTQGVGDILVFMTGQEDIETTCATVEERIKQLGP-QAPPLTLLPIYSQLPSDMQAKI 918
Query: 266 FSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQA 325
F R+ I++TNIAETSLTVDG++YVID GY K + YNP GM SL V ISK A
Sbjct: 919 FEKADNGSRKCIIATNIAETSLTVDGILYVIDTGYCKLKVYNPRVGMDSLQVTPISKANA 978
Query: 326 NQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLK 385
NQR GRAGRT PG+CYRLY + + E +D +PEIQR++L VL LKS+ + N+L
Sbjct: 979 NQRSGRAGRTGPGRCYRLYTESAFKYELMDNNIPEIQRTNLGNVVLNLKSMGVK--NLLD 1036
Query: 386 FDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
FDF+DPP +++ +++ QL+++ A+D+ G IT +G+ M+
Sbjct: 1037 FDFMDPPPQDNILNSMYQLWVLGALDDQGQITPLGKRMS 1075
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 1010 (360.6 bits), Expect = 6.9e-102, P = 6.9e-102
Identities = 187/421 (44%), Positives = 287/421 (68%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LP+ + +GETGSGK+TQ++Q L G++ G+IG TQP
Sbjct: 483 LPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGMIGCTQPRRVAAV 542
Query: 64 XXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
+E+G ++G +VGY IRFED T T IKY+TDG+L RE L +P++S YSVI+L
Sbjct: 543 SVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMSKYSVIML 602
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYP 183
DEAHER++ TD+L L+K+ ++ +LK+++TSATL+ K S++F NCP +N+PGK +P
Sbjct: 603 DEAHERTVATDVLFALLKKAA-IKRPELKVIVTSATLNSAKFSEYFLNCPIINIPGKTFP 661
Query: 184 VEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEG 243
VE+L+S+ Y+E+AL IDIH+ E GD+L+F+TGQ++I+ L D++++L +
Sbjct: 662 VEVLYSQTPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEIDSCCEILYDRVKTLGD- 720
Query: 244 SCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQ 303
S + +ILP++ +LP E+Q ++F P P R+ + +TNIAETS+T+DG+ YV+D G+ K
Sbjct: 721 SIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIAETSITIDGIYYVVDPGFAKI 780
Query: 304 RQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQR 363
YN +G+ L V IS+ QANQR GRAGRT PGKCYRLY + +++E L+ TVPEIQR
Sbjct: 781 NIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEMLENTVPEIQR 840
Query: 364 SSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTM 423
+L+ ++L LK++ ++D+ LKFDF+DPP + +AL +LY + ++D+ G +T++G+ M
Sbjct: 841 QNLSHTILMLKAMGINDL--LKFDFMDPPPKNLMLNALTELYHLQSLDDEGKLTNLGKEM 898
Query: 424 A 424
+
Sbjct: 899 S 899
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 983 (351.1 bits), Expect = 3.6e-101, Sum P(2) = 3.6e-101
Identities = 190/421 (45%), Positives = 277/421 (65%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LP E + +GETGSGK+TQL+Q L+ GY ++G+IG TQP
Sbjct: 492 LPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGYHRNGMIGCTQPRRVAAM 551
Query: 64 XXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
+E+GVRLG VGY+IRFED T T+IKY+TDGVLLRE L +L YSVII+
Sbjct: 552 SVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESLMQNNLEKYSVIIM 611
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYP 183
DEAHERSLNTDIL+GL+K++++ R +K+L+TSAT++ +K S FF P +PG+ YP
Sbjct: 612 DEAHERSLNTDILMGLLKKVLSRRRD-IKLLVTSATMNSQKFSDFFGGAPQFTIPGRTYP 670
Query: 184 VEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEG 243
V+I+ +K + Y+E+A++ + IH+ +P GD+L+FMTGQ+DIE + D++ L +
Sbjct: 671 VDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILVFMTGQEDIEATCEIIADRLNQLHDA 730
Query: 244 SCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQ 303
+ ILP++ +P ++Q ++F P R+ +V+TNIAETSLTV G+ YV+D GY K
Sbjct: 731 PRLS--ILPIYSQMPADLQAKIFDSAEPGVRKVVVATNIAETSLTVHGISYVVDTGYCKL 788
Query: 304 RQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQR 363
+ YN G+ +L V IS+ ANQR GRAGRT PG YRLY Y E + T+PEIQR
Sbjct: 789 KMYNSKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEMAYIREMFETTLPEIQR 848
Query: 364 SSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTM 423
++L+ +VL LKSL + +I+ FDF+D P +++L +L +L+ + A+D G +T++G+ M
Sbjct: 849 TNLSNTVLILKSLGVEEIS--DFDFMDRPPNDTLMASLYELWTLGALDNFGKLTTLGKKM 906
Query: 424 A 424
+
Sbjct: 907 S 907
Score = 40 (19.1 bits), Expect = 3.6e-101, Sum P(2) = 3.6e-101
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 30 GSGKSTQLSQILHRHG 45
GS ST+ S LH G
Sbjct: 41 GSSSSTEFSNALHTFG 56
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 997 (356.0 bits), Expect = 1.7e-100, P = 1.7e-100
Identities = 196/420 (46%), Positives = 276/420 (65%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LPI ++ + +GETGSGK+TQL+Q LH GYT G+IG TQP
Sbjct: 532 LPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAM 591
Query: 64 XXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
+E+G LGEEVGYAIRFED TSE TLIKY+TDG+LLRE L DL YS II+
Sbjct: 592 SVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIM 651
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYP 183
DEAHERSLNTD+L GL++ +V R S LK+++TSAT+D EK + FF N P ++PG+ +P
Sbjct: 652 DEAHERSLNTDVLFGLLREVV-ARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFP 710
Query: 184 VEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEG 243
V+IL SK Y+E+A+K ++ +H+ GD+LIFM GQ+DIE ++ + + L+
Sbjct: 711 VDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENA 770
Query: 244 SCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQ 303
+ +LP++ LP ++Q ++F P R+ IV+TNIAETSLTVDG+++VID GY K
Sbjct: 771 PAL--AVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKL 828
Query: 304 RQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQR 363
+ +PS G L +++I K+Q N G +G T P +C RLY + Y +E L TVPEIQR
Sbjct: 829 KVSSPSLGGSDLKIMEIQKIQKNINTGCSGCTSP-RCCRLYTQSAYKNELLTTTVPEIQR 887
Query: 364 SSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTM 423
++LA VL LKSL + D+ L+F F+DPP +++ +++ QL+++ A+D G +TS GR M
Sbjct: 888 TNLANVVLLLKSLGVQDL--LQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLM 945
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 991 (353.9 bits), Expect = 7.1e-100, P = 7.1e-100
Identities = 196/425 (46%), Positives = 285/425 (67%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPXXXX 61
+LP+ + + GETGSGK+TQL Q L+ G+ + G IG TQP
Sbjct: 363 SLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCTQPRRVA 422
Query: 62 XXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
E+G +LG +VGY+IRFED TSE+T++KY+TDG+LLRE L+ PDL+ YSV+
Sbjct: 423 AMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDLASYSVM 482
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
++DEAHER+L+TDIL GLVK + R LK+LI+SATLD EK S FF + P +PG+
Sbjct: 483 MIDEAHERTLHTDILFGLVKDIARFRKD-LKLLISSATLDAEKFSSFFDDAPIFRIPGRR 541
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREP-EGDVLIFMTGQDDIEKLVSKLEDKIRSL 240
+PV+I +++ Y+++A+ T + IH+ +P GD+L+F+TGQ++IE + L ++ ++L
Sbjct: 542 FPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQEALMERSKAL 601
Query: 241 DEGSCMDAVI-LPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCG 299
GS + +I LP++ +LP ++Q ++F P P + R+ +++TNIAETS+T+DG+ YVID G
Sbjct: 602 --GSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPG 659
Query: 300 YVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVP 359
+ KQ ++ SG+ L VV ISK ANQR GRAGRT PGKC+RLY + Y E + +P
Sbjct: 660 FSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQPIP 719
Query: 360 EIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSI 419
EIQR++L VL LKSL + D+ + FDFLDPP E+L AL+QLY + A++ G +T +
Sbjct: 720 EIQRTNLGNVVLMLKSLGIHDL--VHFDFLDPPPQETLVIALEQLYALGALNHRGELTKL 777
Query: 420 GRTMA 424
GR MA
Sbjct: 778 GRRMA 782
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 991 (353.9 bits), Expect = 7.1e-100, P = 7.1e-100
Identities = 196/425 (46%), Positives = 285/425 (67%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPXXXX 61
+LP+ + + GETGSGK+TQL Q L+ G+ + G IG TQP
Sbjct: 363 SLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCTQPRRVA 422
Query: 62 XXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
E+G +LG +VGY+IRFED TSE+T++KY+TDG+LLRE L+ PDL+ YSV+
Sbjct: 423 AMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDLASYSVM 482
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
++DEAHER+L+TDIL GLVK + R LK+LI+SATLD EK S FF + P +PG+
Sbjct: 483 MIDEAHERTLHTDILFGLVKDIARFRKD-LKLLISSATLDAEKFSSFFDDAPIFRIPGRR 541
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREP-EGDVLIFMTGQDDIEKLVSKLEDKIRSL 240
+PV+I +++ Y+++A+ T + IH+ +P GD+L+F+TGQ++IE + L ++ ++L
Sbjct: 542 FPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQEALMERSKAL 601
Query: 241 DEGSCMDAVI-LPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCG 299
GS + +I LP++ +LP ++Q ++F P P + R+ +++TNIAETS+T+DG+ YVID G
Sbjct: 602 --GSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPG 659
Query: 300 YVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVP 359
+ KQ ++ SG+ L VV ISK ANQR GRAGRT PGKC+RLY + Y E + +P
Sbjct: 660 FSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQPIP 719
Query: 360 EIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSI 419
EIQR++L VL LKSL + D+ + FDFLDPP E+L AL+QLY + A++ G +T +
Sbjct: 720 EIQRTNLGNVVLMLKSLGIHDL--VHFDFLDPPPQETLVIALEQLYALGALNHRGELTKL 777
Query: 420 GRTMA 424
GR MA
Sbjct: 778 GRRMA 782
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 988 (352.9 bits), Expect = 1.5e-99, P = 1.5e-99
Identities = 194/420 (46%), Positives = 274/420 (65%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LP E + +GETGSGK+TQL+Q L+ GY K G+IG TQP
Sbjct: 188 LPAFAVREDLLRVIRDNQVVVVVGETGSGKTTQLTQFLYEDGYAKFGMIGCTQPRRVAAM 247
Query: 64 XXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
+E+ V LG+ VGYAIRFED T T IKY+TDGVLLRE L DL YS II+
Sbjct: 248 SVAKRVSEEMEVDLGDLVGYAIRFEDCTGPNTAIKYMTDGVLLRESLVQTDLDKYSCIIM 307
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYP 183
DEAHER+LNTD+L+GL+K+++ R LK+++TSAT++ E+ S+FF P +PG+ +P
Sbjct: 308 DEAHERALNTDVLMGLLKKIL-ARRRDLKLIVTSATMNAERFSRFFGGAPEFIIPGRTFP 366
Query: 184 VEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEG 243
V++ S+ Y++SA+K + IHV + GD+L+FMTGQ+DIE ++++++ L++
Sbjct: 367 VDVHFSRTPCEDYVDSAVKQVLAIHVSQGPGDILVFMTGQEDIEATCELVDERLKLLNDP 426
Query: 244 SCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQ 303
+ ILP++ +P E Q ++F P R+ IV+TNIAETSLTVDG+++V+D GY K
Sbjct: 427 PKLS--ILPIYSQMPAEQQAKIFERAAPGVRKVIVATNIAETSLTVDGIMFVVDSGYSKL 484
Query: 304 RQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQR 363
+ YNP GM +L + IS+ ANQR GRAGRT PGK YRLY Y +E T+PEIQR
Sbjct: 485 KVYNPKMGMDTLQITPISQANANQRSGRAGRTGPGKAYRLYTEVAYKNEMYLQTIPEIQR 544
Query: 364 SSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTM 423
+SL+ +VL LKSL + D+ L FDF+DPP E++ +L +L+ + A+D G +T +GR M
Sbjct: 545 TSLSNTVLLLKSLGVKDL--LDFDFMDPPPQETISTSLFELWSLGALDNLGDLTHLGRQM 602
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 977 (349.0 bits), Expect = 2.2e-98, P = 2.2e-98
Identities = 188/428 (43%), Positives = 281/428 (65%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LP E + +GETGSGK+TQL+Q L+ GY + G+IG TQP
Sbjct: 303 LPAFAVREDLMRVIRDNQVIIVVGETGSGKTTQLTQFLYEDGYGQLGMIGCTQPRRVAAM 362
Query: 64 XXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
+E+ V+LG VGYAIRFED TS+ T+IKY+TDGVLLRE L+ PDL YS II+
Sbjct: 363 SVAKRVSEEMEVKLGGTVGYAIRFEDCTSKDTVIKYMTDGVLLRESLNEPDLDRYSCIIM 422
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYP 183
DEAHER+LNTD+L+GL K+++ R LK+++TSAT++ ++ S FF P +PG+ +P
Sbjct: 423 DEAHERALNTDVLMGLFKKILQRRRD-LKLIVTSATMNAKRFSDFFGGAPDFTIPGRTFP 481
Query: 184 VEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEG 243
V+++ S+ Y++ A++ ++IHV GD+L+FMTGQ+DIE + +++ +L++
Sbjct: 482 VDVMFSRSPVEDYVDQAVQQVLNIHVSMGTGDILVFMTGQEDIEVTCELVRERLDALNDP 541
Query: 244 SCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQ 303
+ ILP++ +P ++Q ++F PP R+ IV+TNIAETSLTVDG++YV+D GY K
Sbjct: 542 PKLS--ILPIYSQMPADLQAKIFDRAPPGVRKCIVATNIAETSLTVDGIMYVVDAGYSKL 599
Query: 304 RQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQR 363
+ YNP GM +L + IS+ A+QR GRAGRT PGK +RL+ + DE T+PEIQR
Sbjct: 600 KVYNPKMGMDTLQITPISQANASQRSGRAGRTGPGKAFRLFTEKAFKDELYIQTIPEIQR 659
Query: 364 SSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTM 423
++L+ ++L +KSL + D+ L FDF+DPP +++ +L L+ + A+D G +T +GR M
Sbjct: 660 TNLSNTILLIKSLGVKDM--LDFDFMDPPPQDTMTTSLFDLWALGALDNLGDMTDLGRKM 717
Query: 424 AGTSFFAL 431
+FF +
Sbjct: 718 ---NFFPM 722
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 976 (348.6 bits), Expect = 2.8e-98, P = 2.8e-98
Identities = 202/445 (45%), Positives = 285/445 (64%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LPI QY++ + GETGSGK+TQL Q L++ G +++G IGVTQP
Sbjct: 18 LPIYQYKDKLVQAVEENTFLIVTGETGSGKTTQLPQYLYKAGLSRNGRIGVTQPRRVAAI 77
Query: 64 XXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
E+ VRLGEEVGY +RF+D +++ T+IKY+TDG LLREIL++P L+ YS++IL
Sbjct: 78 TVAQRVSSEMQVRLGEEVGYQVRFDDCSTKDTMIKYMTDGCLLREILADPSLTQYSIVIL 137
Query: 124 DEAHERSLNTDILLGLVKR--LVNLRASK--LKILITSATLDGEKVSKFFSNCPTLNVPG 179
DEAHERSLNTD+LLGL+K+ L R +K LK+++ SATL+ EK+S F+ NCP +PG
Sbjct: 138 DEAHERSLNTDVLLGLLKKTLLKGSRGNKTPLKVVVMSATLETEKLSSFYGNCPVFTIPG 197
Query: 180 KLYPVE-----ILHSKERPTS-YLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKL 233
+ YPV+ ++ K++ +S Y++ +K +D+H E GD+L+F+TGQ +IEK L
Sbjct: 198 RTYPVKETFCNLIGPKDKESSVYVKEVVKMTLDVHTNEAAGDILVFLTGQSEIEKACDLL 257
Query: 234 EDKIRSLD------EGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSL 287
+K LD + S +IL L+GS+P + Q ++F P P R+ +V+TNIA TSL
Sbjct: 258 FEKAEILDYRYDVHDRSVDGLLILSLYGSMPTDQQRQIFQPAPKGVRKCVVATNIAATSL 317
Query: 288 TVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPST 347
T+DG+ Y++D G+VKQ +N G+ L+VV ISK +A QR GRAGRT GKC+R+Y
Sbjct: 318 TIDGIRYIVDSGFVKQLNHNSRVGLDILEVVPISKSEAQQRAGRAGRTAAGKCFRIYSKD 377
Query: 348 VYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLI 407
+ + T+PEIQR+SL +L LK L + D V++F +LD P + ALKQLY
Sbjct: 378 FWDTCMPEYTIPEIQRTSLTSVILTLKCLGVHD--VIRFPYLDCPEERFILTALKQLYQY 435
Query: 408 DAIDENGSITSIGRTMAGTSFFALP 432
DAID G +T +GR M F LP
Sbjct: 436 DAIDRRGEVTKLGRLMVE---FPLP 457
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 969 (346.2 bits), Expect = 1.5e-97, P = 1.5e-97
Identities = 204/434 (47%), Positives = 281/434 (64%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQ----ILHRHGYTKSGIIGVTQPXX 59
LP+ +Y+E +GETGSGK+TQ+ Q ++ K G+ TQP
Sbjct: 111 LPVWEYKERFNDILNRHQSFVLVGETGSGKTTQIPQWCVDMVRSLPGPKRGV-ACTQPRR 169
Query: 60 XXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYS 119
E+ V LG+EVGY+IRFED +S +T++KY+TDG+LLRE +++P L Y
Sbjct: 170 VAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYG 229
Query: 120 VIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPG 179
VIILDEAHER+L TDIL+G++K +V R S LK+++ SATLD K +F NCP L +PG
Sbjct: 230 VIILDEAHERTLATDILMGVLKEVVRQR-SDLKVIVMSATLDAGKFQVYFDNCPLLTIPG 288
Query: 180 KLYPVEILHSKERPTSYLESALKTAIDIHV-REPEGDVLIFMTGQDDIEKLVSKLEDKIR 238
+ +PVEI ++ E YLE+A++T I IH+ E EGDVL+F+TGQ++I++ +++ +I
Sbjct: 289 RTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEDEGDVLLFLTGQEEIDEACKRIKREID 348
Query: 239 SL--DEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNC------RRFIVSTNIAETSLTVD 290
L D G D I+PL+ +LPP+ Q R+F PPPP R+ +VSTNIAETSLT+D
Sbjct: 349 DLGPDVG---DIKIIPLYSTLPPQQQQRIFEPPPPRKPNGAIGRKVVVSTNIAETSLTID 405
Query: 291 GVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYH 350
GVV+VID G+ KQ+ YNP + SL V ISK A QR GRAGRTRPGKC+RLY Y
Sbjct: 406 GVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYK 465
Query: 351 DEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI 410
E D T PEI RS+L VL LK L + D+ + FDF+DPP+ E+L AL+ L + A+
Sbjct: 466 TEMQDNTYPEILRSNLGSVVLQLKKLGIDDL--VHFDFMDPPAPETLMRALELLNYLAAL 523
Query: 411 DENGSITSIGRTMA 424
+++G +T +G MA
Sbjct: 524 NDDGDLTELGSMMA 537
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 965 (344.8 bits), Expect = 4.1e-97, P = 4.1e-97
Identities = 199/409 (48%), Positives = 277/409 (67%)
Query: 26 IGETGSGKSTQLSQ--ILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGY 83
+GETGSGK+TQ+ Q +L T+ +I TQP EL V LGEEVGY
Sbjct: 121 VGETGSGKTTQIPQFVLLDDLPQTQRKMIACTQPRRVAAMSVAQRVAAELDVTLGEEVGY 180
Query: 84 AIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRL 143
+IRFED TS +TL+KY+TDG+LLRE +++ +LS YS IILDEAHER+++TD+L+GL+K +
Sbjct: 181 SIRFEDMTSPKTLLKYMTDGMLLREAMNDHELSRYSTIILDEAHERTMSTDVLMGLLKEV 240
Query: 144 VNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERPTSYLESALKT 203
V R LKI+I SATLD +K ++F++ P L VPG+ +PVEI ++ E Y+E+A++T
Sbjct: 241 VQRRPD-LKIIIMSATLDAQKFQRYFNDAPLLAVPGRTHPVEIFYTPEPEQDYVEAAIRT 299
Query: 204 AIDIHVREPEGDVLIFMTGQDDIEKLVSKL----EDKIRSLDEGSCMDAVILPLHGSLPP 259
+ IH E EGD+L+F+TG+++IE K+ ++ IR D G + L+GSLPP
Sbjct: 300 VLQIHATEDEGDILLFLTGEEEIEDAARKISLEGDEMIREADAGPLK---VYTLYGSLPP 356
Query: 260 EMQVRVFSP-PPPNC------RRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGM 312
MQ R+F P PPP R+ IVSTNIAETSLT+DG+VYV+D G+ KQ+ YNP +
Sbjct: 357 HMQQRIFEPAPPPRRPGGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRV 416
Query: 313 YSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLY 372
SL V ISK A QR GRAGRTRPGKC+RLY + + E +D T PEI RS+L+ +VL
Sbjct: 417 ESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTESAFKKELIDQTYPEILRSNLSSTVLE 476
Query: 373 LKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGR 421
LK L + D+ + FD +DPP+ E+L AL++L + +D++G++T +GR
Sbjct: 477 LKKLGIDDL--VHFDLMDPPAPETLMRALEELNYLACLDDDGNLTPLGR 523
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 965 (344.8 bits), Expect = 4.1e-97, P = 4.1e-97
Identities = 192/427 (44%), Positives = 281/427 (65%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPXXXX 61
+LP+ Y E +GETGSGK+TQL Q LH GY+++ +I TQP
Sbjct: 228 SLPVYSYREEFLKIINENQTLIVVGETGSGKTTQLPQYLHEAGYSRNNQVIACTQPRRVA 287
Query: 62 XXXXXXXXXQELGVRLGEEVGYAIRFEDRTSER-TLIKYLTDGVLLREILSNPDLSPYSV 120
E+ V+LGE+VGY IRF+D + T+IKY+TDG+LLRE L +P L YS
Sbjct: 288 ATSVANRVANEMQVKLGEQVGYNIRFDDNCKDGVTVIKYVTDGMLLREFLQDPTLGKYSA 347
Query: 121 IILDEAHERSLNTDILLGLVKR-LVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPG 179
I++DEAHER+L+T+ILL L+K ++ R LKI+I SAT++ EK S+FF+N P LN+PG
Sbjct: 348 IMIDEAHERTLSTEILLSLLKDVMMTTRKDDLKIIIASATINAEKFSQFFNNAPILNIPG 407
Query: 180 KLYPVEILHSKERPTSYLESALKTAIDIHVREP-EGDVLIFMTGQDDIEKLVSKLEDKIR 238
+ +PV+I ++K+ +Y+++A+ T IH+ +P GD+L+F+TGQD+IE + L D I
Sbjct: 408 RRFPVKIHYTKQPEANYIQAAITTIFQIHMTQPLPGDILVFLTGQDEIETMEEILRDSIL 467
Query: 239 SLDEGSCMDAVIL-PLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVID 297
L G +D +I+ ++ +LP E+Q ++F P P N R+ +++TNIAETS+T+DG+ YVID
Sbjct: 468 KL--GDQIDPMIVCSIYANLPQELQQKIFQPTPSNTRKIVLATNIAETSITIDGISYVID 525
Query: 298 CGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVT 357
GYVKQ YNP++GM SL VV S+ A+QR GRAGR PGKC+RL+ +++E
Sbjct: 526 PGYVKQNVYNPTTGMESLVVVPCSRASADQRAGRAGRVGPGKCFRLFTKWSFYNELDSNQ 585
Query: 358 VPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSIT 417
PEIQR +L +L L SL ++D+ L F+F+DPPS E++ AL LY + A++ G +T
Sbjct: 586 QPEIQRVNLTSVILLLLSLGINDL--LGFEFMDPPSKEAIIKALNLLYALGALNTQGKLT 643
Query: 418 SIGRTMA 424
G+ M+
Sbjct: 644 KTGKKMS 650
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 965 (344.8 bits), Expect = 4.1e-97, P = 4.1e-97
Identities = 201/432 (46%), Positives = 279/432 (64%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQ--ILHRHGYT--KSGIIGVTQPXX 59
LP+ +Y+E +GETGSGK+TQ+ Q + + K G+ TQP
Sbjct: 104 LPVWEYKERFTDILIRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGV-ACTQPRR 162
Query: 60 XXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYS 119
E+ V LG+EVGY+IRFED +S +T++KY+TDG+LLRE +++P L Y
Sbjct: 163 VAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYG 222
Query: 120 VIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPG 179
VIILDEAHER+L TDIL+G++K +V RA LK+++ SATLD K +F NCP L +PG
Sbjct: 223 VIILDEAHERTLATDILMGVLKEVVRQRAD-LKVIVMSATLDAGKFQIYFDNCPLLTIPG 281
Query: 180 KLYPVEILHSKERPTSYLESALKTAIDIHV-REPEGDVLIFMTGQDDIEKLVSKLEDKIR 238
+ +PVEI ++ E YLE+A++T I IH+ E EGD+L+F+TGQ++I++ +++ +I
Sbjct: 282 RTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREID 341
Query: 239 SLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNC------RRFIVSTNIAETSLTVDGV 292
L D I+PL+ +LPP+ Q R+F PPPP R+ +VSTNIAETSLT+DGV
Sbjct: 342 DLGP-EVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGV 400
Query: 293 VYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDE 352
V+VID G+ KQ+ YNP + SL V ISK A QR GRAGRTRPGKC+RLY Y E
Sbjct: 401 VFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTE 460
Query: 353 FLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDE 412
D T PEI RS+L VL LK L + D+ + FDF+DPP+ E+L AL+ L + A+++
Sbjct: 461 MQDNTYPEILRSNLGSVVLQLKKLGIDDL--VHFDFMDPPAPETLMRALELLNYLAALND 518
Query: 413 NGSITSIGRTMA 424
+G +T +G MA
Sbjct: 519 DGDLTELGSMMA 530
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 963 (344.1 bits), Expect = 6.6e-97, P = 6.6e-97
Identities = 191/404 (47%), Positives = 275/404 (68%)
Query: 26 IGETGSGKSTQLSQ--ILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGY 83
+GETGSGK+TQ+ Q + + ++ + TQP +E+ V+LGEEVGY
Sbjct: 115 VGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGY 174
Query: 84 AIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRL 143
+IRFE++TS +T++KY+TDG+LLRE + + DLS YS IILDEAHER+L TDIL+GL+K++
Sbjct: 175 SIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQV 234
Query: 144 VNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERPTSYLESALKT 203
V R LKI+I SATLD EK ++F++ P L VPG+ YPVE+ ++ E YL+SA++T
Sbjct: 235 VKRRPD-LKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRT 293
Query: 204 AIDIHVREPEGDVLIFMTGQDDIEKLVSKLE-DKIRSLDEGSCMDAVILPLHGSLPPEMQ 262
+ IH E GD+L+F+TG+D+IE V K+ + + + E C + PL+GSLPP Q
Sbjct: 294 VLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQ 353
Query: 263 VRVFSPPPPNC-----RRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDV 317
R+F P P + R+ ++STNIAETSLT+DG+VYV+D G+ KQ+ YNP + SL V
Sbjct: 354 QRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLV 413
Query: 318 VQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLD 377
ISK A QR GRAGRTRPGKC+RLY + E ++ + PEI RS+L+ +VL LK L
Sbjct: 414 SPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLG 473
Query: 378 LSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGR 421
+ D+ + FDF+DPP+ E++ AL++L + +D+ G++T +GR
Sbjct: 474 IDDL--VHFDFMDPPAPETMMRALEELNYLACLDDEGNLTPLGR 515
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 962 (343.7 bits), Expect = 8.4e-97, P = 8.4e-97
Identities = 203/439 (46%), Positives = 284/439 (64%)
Query: 2 ANLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQIL------HRHGYT--KSGIIG 53
+ LP+ +Y+E +GETGSGK+TQ+ Q + G ++ ++
Sbjct: 74 SQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQARLVA 133
Query: 54 VTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNP 113
TQP +E+ V LG+EVGY+IRFED SERT++KY TDG+LLRE +++P
Sbjct: 134 CTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAMNSP 193
Query: 114 DLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCP 173
L Y V+ILDEAHER+L TDIL+GL+K +V RA +K++I SATLD K ++F +CP
Sbjct: 194 LLDKYKVLILDEAHERTLATDILMGLIKEIVRNRAD-IKVVIMSATLDAGKFQRYFEDCP 252
Query: 174 TLNVPGKLYPVEILHSKERPTSYLESALKTAIDIH-VREPEGDVLIFMTGQDDIEKLVSK 232
L+VPG+ +PVEI + YLE+A++T I IH V E EGD+L+F+TGQ++IE+ +
Sbjct: 253 LLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIEEACKR 312
Query: 233 LEDKIRSLDEGSCMDAV-ILPLHGSLPPEMQVRVFSPPPPN------CRRFIVSTNIAET 285
++ +I++L G+ A+ +PL+ +LPP Q R+F P PPN R+ ++STNIAET
Sbjct: 313 IDREIQAL--GADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTNIAET 370
Query: 286 SLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYP 345
SLT+DGVV+VID G+ KQ+ YNP + SL V ISK A QR GRAGRT+PGKC+RLY
Sbjct: 371 SLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCFRLYT 430
Query: 346 STVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLY 405
T Y E D T PEI RS+L VL LK L D+ + FDF+DPP+ E+L AL+ L
Sbjct: 431 ETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDL--VHFDFMDPPAPETLMRALELLN 488
Query: 406 LIDAIDENGSITSIGRTMA 424
+ AI+++G +T +G MA
Sbjct: 489 YLQAINDDGELTELGSLMA 507
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 962 (343.7 bits), Expect = 8.4e-97, P = 8.4e-97
Identities = 203/439 (46%), Positives = 284/439 (64%)
Query: 2 ANLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQIL------HRHGYT--KSGIIG 53
+ LP+ +Y+E +GETGSGK+TQ+ Q + G ++ ++
Sbjct: 74 SQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQARLVA 133
Query: 54 VTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNP 113
TQP +E+ V LG+EVGY+IRFED SERT++KY TDG+LLRE +++P
Sbjct: 134 CTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAMNSP 193
Query: 114 DLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCP 173
L Y V+ILDEAHER+L TDIL+GL+K +V RA +K++I SATLD K ++F +CP
Sbjct: 194 LLDKYKVLILDEAHERTLATDILMGLIKEIVRNRAD-IKVVIMSATLDAGKFQRYFEDCP 252
Query: 174 TLNVPGKLYPVEILHSKERPTSYLESALKTAIDIH-VREPEGDVLIFMTGQDDIEKLVSK 232
L+VPG+ +PVEI + YLE+A++T I IH V E EGD+L+F+TGQ++IE+ +
Sbjct: 253 LLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIEEACKR 312
Query: 233 LEDKIRSLDEGSCMDAV-ILPLHGSLPPEMQVRVFSPPPPN------CRRFIVSTNIAET 285
++ +I++L G+ A+ +PL+ +LPP Q R+F P PPN R+ ++STNIAET
Sbjct: 313 IDREIQAL--GADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTNIAET 370
Query: 286 SLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYP 345
SLT+DGVV+VID G+ KQ+ YNP + SL V ISK A QR GRAGRT+PGKC+RLY
Sbjct: 371 SLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCFRLYT 430
Query: 346 STVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLY 405
T Y E D T PEI RS+L VL LK L D+ + FDF+DPP+ E+L AL+ L
Sbjct: 431 ETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDL--VHFDFMDPPAPETLMRALELLN 488
Query: 406 LIDAIDENGSITSIGRTMA 424
+ AI+++G +T +G MA
Sbjct: 489 YLQAINDDGELTELGSLMA 507
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 961 (343.3 bits), Expect = 1.1e-96, P = 1.1e-96
Identities = 198/431 (45%), Positives = 278/431 (64%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI---IGVTQPXXX 60
LP+ +Y++ +GETGSGK+TQ+ Q + + G + TQP
Sbjct: 137 LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRV 196
Query: 61 XXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSV 120
E+ V LG+EVGY+IRFED +S +T++KY+TDG+LLRE +++P L Y V
Sbjct: 197 AAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGV 256
Query: 121 IILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGK 180
IILDEAHER+L TDIL+G++K +V R S LK+++ SATLD K +F NCP L +PG+
Sbjct: 257 IILDEAHERTLATDILMGVLKEVVRQR-SDLKVIVMSATLDAGKFQIYFDNCPLLTIPGR 315
Query: 181 LYPVEILHSKERPTSYLESALKTAIDIHV-REPEGDVLIFMTGQDDIEKLVSKLEDKIRS 239
+PVEI ++ E YLE+A++T I IH+ E EGD+L+F+TGQ++I++ +++ ++
Sbjct: 316 THPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDD 375
Query: 240 LDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNC------RRFIVSTNIAETSLTVDGVV 293
L D I+PL+ +LPP+ Q R+F PPPP R+ +VSTNIAETSLT+DGVV
Sbjct: 376 LGP-EVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVV 434
Query: 294 YVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEF 353
+VID G+ KQ+ YNP + SL V ISK A QR GRAGRTRPGKC+RLY Y E
Sbjct: 435 FVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEM 494
Query: 354 LDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDEN 413
D T PEI RS+L VL LK L + D+ + FDF+DPP+ E+L AL+ L + A++++
Sbjct: 495 QDNTYPEILRSNLGSVVLQLKKLGIDDL--VHFDFMDPPAPETLMRALELLNYLAALNDD 552
Query: 414 GSITSIGRTMA 424
G +T +G MA
Sbjct: 553 GDLTELGSMMA 563
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 961 (343.3 bits), Expect = 1.1e-96, P = 1.1e-96
Identities = 198/431 (45%), Positives = 278/431 (64%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI---IGVTQPXXX 60
LP+ +Y++ +GETGSGK+TQ+ Q + + G + TQP
Sbjct: 137 LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRV 196
Query: 61 XXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSV 120
E+ V LG+EVGY+IRFED +S +T++KY+TDG+LLRE +++P L Y V
Sbjct: 197 AAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGV 256
Query: 121 IILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGK 180
IILDEAHER+L TDIL+G++K +V R S LK+++ SATLD K +F NCP L +PG+
Sbjct: 257 IILDEAHERTLATDILMGVLKEVVRQR-SDLKVIVMSATLDAGKFQIYFDNCPLLTIPGR 315
Query: 181 LYPVEILHSKERPTSYLESALKTAIDIHV-REPEGDVLIFMTGQDDIEKLVSKLEDKIRS 239
+PVEI ++ E YLE+A++T I IH+ E EGD+L+F+TGQ++I++ +++ ++
Sbjct: 316 THPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDD 375
Query: 240 LDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNC------RRFIVSTNIAETSLTVDGVV 293
L D I+PL+ +LPP+ Q R+F PPPP R+ +VSTNIAETSLT+DGVV
Sbjct: 376 LGP-EVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVV 434
Query: 294 YVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEF 353
+VID G+ KQ+ YNP + SL V ISK A QR GRAGRTRPGKC+RLY Y E
Sbjct: 435 FVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEM 494
Query: 354 LDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDEN 413
D T PEI RS+L VL LK L + D+ + FDF+DPP+ E+L AL+ L + A++++
Sbjct: 495 QDNTYPEILRSNLGSVVLQLKKLGIDDL--VHFDFMDPPAPETLMRALELLNYLAALNDD 552
Query: 414 GSITSIGRTMA 424
G +T +G MA
Sbjct: 553 GDLTELGSMMA 563
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 961 (343.3 bits), Expect = 1.1e-96, P = 1.1e-96
Identities = 198/431 (45%), Positives = 278/431 (64%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI---IGVTQPXXX 60
LP+ +Y++ +GETGSGK+TQ+ Q + + G + TQP
Sbjct: 137 LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRV 196
Query: 61 XXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSV 120
E+ V LG+EVGY+IRFED +S +T++KY+TDG+LLRE +++P L Y V
Sbjct: 197 AAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGV 256
Query: 121 IILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGK 180
IILDEAHER+L TDIL+G++K +V R S LK+++ SATLD K +F NCP L +PG+
Sbjct: 257 IILDEAHERTLATDILMGVLKEVVRQR-SDLKVIVMSATLDAGKFQIYFDNCPLLTIPGR 315
Query: 181 LYPVEILHSKERPTSYLESALKTAIDIHV-REPEGDVLIFMTGQDDIEKLVSKLEDKIRS 239
+PVEI ++ E YLE+A++T I IH+ E EGD+L+F+TGQ++I++ +++ ++
Sbjct: 316 THPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDD 375
Query: 240 LDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNC------RRFIVSTNIAETSLTVDGVV 293
L D I+PL+ +LPP+ Q R+F PPPP R+ +VSTNIAETSLT+DGVV
Sbjct: 376 LGP-EVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVV 434
Query: 294 YVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEF 353
+VID G+ KQ+ YNP + SL V ISK A QR GRAGRTRPGKC+RLY Y E
Sbjct: 435 FVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEM 494
Query: 354 LDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDEN 413
D T PEI RS+L VL LK L + D+ + FDF+DPP+ E+L AL+ L + A++++
Sbjct: 495 QDNTYPEILRSNLGSVVLQLKKLGIDDL--VHFDFMDPPAPETLMRALELLNYLAALNDD 552
Query: 414 GSITSIGRTMA 424
G +T +G MA
Sbjct: 553 GDLTELGSMMA 563
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 961 (343.3 bits), Expect = 1.1e-96, P = 1.1e-96
Identities = 198/431 (45%), Positives = 278/431 (64%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI---IGVTQPXXX 60
LP+ +Y++ +GETGSGK+TQ+ Q + + G + TQP
Sbjct: 137 LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRV 196
Query: 61 XXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSV 120
E+ V LG+EVGY+IRFED +S +T++KY+TDG+LLRE +++P L Y V
Sbjct: 197 AAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGV 256
Query: 121 IILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGK 180
IILDEAHER+L TDIL+G++K +V R S LK+++ SATLD K +F NCP L +PG+
Sbjct: 257 IILDEAHERTLATDILMGVLKEVVRQR-SDLKVIVMSATLDAGKFQIYFDNCPLLTIPGR 315
Query: 181 LYPVEILHSKERPTSYLESALKTAIDIHV-REPEGDVLIFMTGQDDIEKLVSKLEDKIRS 239
+PVEI ++ E YLE+A++T I IH+ E EGD+L+F+TGQ++I++ +++ ++
Sbjct: 316 THPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDD 375
Query: 240 LDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNC------RRFIVSTNIAETSLTVDGVV 293
L D I+PL+ +LPP+ Q R+F PPPP R+ +VSTNIAETSLT+DGVV
Sbjct: 376 LGP-EVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVV 434
Query: 294 YVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEF 353
+VID G+ KQ+ YNP + SL V ISK A QR GRAGRTRPGKC+RLY Y E
Sbjct: 435 FVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEM 494
Query: 354 LDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDEN 413
D T PEI RS+L VL LK L + D+ + FDF+DPP+ E+L AL+ L + A++++
Sbjct: 495 QDNTYPEILRSNLGSVVLQLKKLGIDDL--VHFDFMDPPAPETLMRALELLNYLAALNDD 552
Query: 414 GSITSIGRTMA 424
G +T +G MA
Sbjct: 553 GDLTELGSMMA 563
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 961 (343.3 bits), Expect = 1.1e-96, P = 1.1e-96
Identities = 198/431 (45%), Positives = 278/431 (64%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI---IGVTQPXXX 60
LP+ +Y++ +GETGSGK+TQ+ Q + + G + TQP
Sbjct: 137 LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRV 196
Query: 61 XXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSV 120
E+ V LG+EVGY+IRFED +S +T++KY+TDG+LLRE +++P L Y V
Sbjct: 197 AAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGV 256
Query: 121 IILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGK 180
IILDEAHER+L TDIL+G++K +V R S LK+++ SATLD K +F NCP L +PG+
Sbjct: 257 IILDEAHERTLATDILMGVLKEVVRQR-SDLKVIVMSATLDAGKFQIYFDNCPLLTIPGR 315
Query: 181 LYPVEILHSKERPTSYLESALKTAIDIHV-REPEGDVLIFMTGQDDIEKLVSKLEDKIRS 239
+PVEI ++ E YLE+A++T I IH+ E EGD+L+F+TGQ++I++ +++ ++
Sbjct: 316 THPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDD 375
Query: 240 LDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNC------RRFIVSTNIAETSLTVDGVV 293
L D I+PL+ +LPP+ Q R+F PPPP R+ +VSTNIAETSLT+DGVV
Sbjct: 376 LGP-EVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVV 434
Query: 294 YVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEF 353
+VID G+ KQ+ YNP + SL V ISK A QR GRAGRTRPGKC+RLY Y E
Sbjct: 435 FVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEM 494
Query: 354 LDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDEN 413
D T PEI RS+L VL LK L + D+ + FDF+DPP+ E+L AL+ L + A++++
Sbjct: 495 QDNTYPEILRSNLGSVVLQLKKLGIDDL--VHFDFMDPPAPETLMRALELLNYLAALNDD 552
Query: 414 GSITSIGRTMA 424
G +T +G MA
Sbjct: 553 GDLTELGSMMA 563
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 961 (343.3 bits), Expect = 1.1e-96, P = 1.1e-96
Identities = 198/431 (45%), Positives = 278/431 (64%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI---IGVTQPXXX 60
LP+ +Y++ +GETGSGK+TQ+ Q + + G + TQP
Sbjct: 137 LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRV 196
Query: 61 XXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSV 120
E+ V LG+EVGY+IRFED +S +T++KY+TDG+LLRE +++P L Y V
Sbjct: 197 AAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGV 256
Query: 121 IILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGK 180
IILDEAHER+L TDIL+G++K +V R S LK+++ SATLD K +F NCP L +PG+
Sbjct: 257 IILDEAHERTLATDILMGVLKEVVRQR-SDLKVIVMSATLDAGKFQIYFDNCPLLTIPGR 315
Query: 181 LYPVEILHSKERPTSYLESALKTAIDIHV-REPEGDVLIFMTGQDDIEKLVSKLEDKIRS 239
+PVEI ++ E YLE+A++T I IH+ E EGD+L+F+TGQ++I++ +++ ++
Sbjct: 316 THPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDD 375
Query: 240 LDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNC------RRFIVSTNIAETSLTVDGVV 293
L D I+PL+ +LPP+ Q R+F PPPP R+ +VSTNIAETSLT+DGVV
Sbjct: 376 LGP-EVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVV 434
Query: 294 YVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEF 353
+VID G+ KQ+ YNP + SL V ISK A QR GRAGRTRPGKC+RLY Y E
Sbjct: 435 FVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEM 494
Query: 354 LDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDEN 413
D T PEI RS+L VL LK L + D+ + FDF+DPP+ E+L AL+ L + A++++
Sbjct: 495 QDNTYPEILRSNLGSVVLQLKKLGIDDL--VHFDFMDPPAPETLMRALELLNYLAALNDD 552
Query: 414 GSITSIGRTMA 424
G +T +G MA
Sbjct: 553 GDLTELGSMMA 563
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 960 (343.0 bits), Expect = 1.4e-96, P = 1.4e-96
Identities = 202/431 (46%), Positives = 286/431 (66%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGV--TQPXXXX 61
LP+ +Y+ +GETGSGK+TQ+ Q +K G GV TQP
Sbjct: 72 LPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWCVDFAVSK-GRKGVSCTQPRRVA 130
Query: 62 XXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
+E+ V+LGEEVGY+IRFED ++ +TL+KY+TDG+LLRE +S+P L Y VI
Sbjct: 131 AMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAKTLLKYMTDGMLLREAMSDPMLDQYQVI 190
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
+LDEAHER+L TDIL+G++K ++ R S LK+++ SATLD K ++F N P + VPG+
Sbjct: 191 LLDEAHERTLATDILMGVLKEVIRQR-SDLKLVVMSATLDAGKFQQYFDNAPLMKVPGRT 249
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHV-REPEGDVLIFMTGQDDIEKLVSKLEDKIRSL 240
+PVEI ++ E YLE+A++T I IH+ E EGD+L+F+TGQ++IE+ +++ +I +L
Sbjct: 250 HPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDILMFLTGQEEIEEACKRIKREIDNL 309
Query: 241 DEGSCMDAV-ILPLHGSLPPEMQVRVFSP-PPPNC-----RRFIVSTNIAETSLTVDGVV 293
GS + + +PL+ +LPP +Q R+F P PPPN R+ +VSTNIAETSLT+DGVV
Sbjct: 310 --GSEIGELKCIPLYSTLPPNLQQRIFEPAPPPNANGAIGRKVVVSTNIAETSLTIDGVV 367
Query: 294 YVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEF 353
+VID G+ KQ+ YNP + SL V ISK A QR GRAGRTRPGKC+RLY + +E
Sbjct: 368 FVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRSGRAGRTRPGKCFRLYTEKAFKNEM 427
Query: 354 LDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDEN 413
D T PEI RS+L VL LK L + D+ + FDF+DPP+ E+L AL+ L + A+D++
Sbjct: 428 QDNTYPEILRSNLGTVVLQLKKLGIDDL--VHFDFMDPPAPETLMRALELLNYLAALDDD 485
Query: 414 GSITSIGRTMA 424
G++T +G M+
Sbjct: 486 GNLTDLGAVMS 496
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 959 (342.6 bits), Expect = 1.8e-96, P = 1.8e-96
Identities = 200/429 (46%), Positives = 278/429 (64%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQ-ILHRH-GYTKSGIIGVTQPXXXX 61
LP+ Q E +GETGSGK+TQ+ Q +L+ + + I TQP
Sbjct: 75 LPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLTNTQIACTQPRRVA 134
Query: 62 XXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
E+ V LGEEVGY IRFED + TL+KY+TDG+LLRE +++ LS YS I
Sbjct: 135 AMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLREAMTDHMLSRYSCI 194
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
ILDEAHER+L TDIL+GL+KRL R LKI++ SATLD +K K+F + P L VPG+
Sbjct: 195 ILDEAHERTLATDILMGLMKRLATRRPD-LKIIVMSATLDAKKFQKYFFDAPLLAVPGRT 253
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIE----KLVSKLEDKI 237
YPVEI +++E YLE+AL+T + IHV E GD+L+F+TG+++IE K+ + +D +
Sbjct: 254 YPVEIYYTQEPERDYLEAALRTVLQIHVEEGPGDILVFLTGEEEIEDACRKITLEADDLV 313
Query: 238 RSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNC-----RRFIVSTNIAETSLTVDGV 292
R EG+ + PL+GSLPP Q R+F P P + R+ ++STNIAETSLT+DG+
Sbjct: 314 R---EGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKSGYGRKVVISTNIAETSLTIDGI 370
Query: 293 VYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDE 352
VYV+D G+ KQ+ YNP + SL V ISK A QR GRAGRTRPGKC+RLY + E
Sbjct: 371 VYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFRKE 430
Query: 353 FLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDE 412
++ T PEI RS+L+ +VL LK L + D+ + FD++DPP+ E++ AL++L ++ +D+
Sbjct: 431 LIEQTYPEILRSNLSSTVLELKKLGIDDL--VHFDYMDPPAPETMMRALEELNYLNCLDD 488
Query: 413 NGSITSIGR 421
NG +T +GR
Sbjct: 489 NGDLTPLGR 497
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 953 (340.5 bits), Expect = 7.6e-96, P = 7.6e-96
Identities = 194/437 (44%), Positives = 287/437 (65%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
+LP+ ++ + I ETG+GK+TQ+ Q L+ +GY +GII +TQP
Sbjct: 72 SLPVFTAKDALLKNFKEHSTVIIISETGTGKTTQIPQYLYENGYKDNGIIAITQPRRVAA 131
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
QE+GV LG++VGY +RF+D+T+E+T +KY+TDG+L+RE + + LS YSVII
Sbjct: 132 VSISKRVSQEMGVELGDQVGYCVRFDDKTNEKTKLKYMTDGMLVREAMLDSSLSKYSVII 191
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASK--LKILITSATLDGEKVSKFFSNCPTLNVPGK 180
LDEAHER+LNTD+L GL+K + R K LKI+I SATLD E S++F+N P L + G+
Sbjct: 192 LDEAHERTLNTDVLFGLLKSIQKRREKKNPLKIIIMSATLDAELFSQYFNNAPVLYIEGR 251
Query: 181 LYPVEILHSKERPTSYLESALKTAIDIHV---------REPE---GDVLIFMTGQDDIEK 228
+PV+I +++E Y+++AL T + IH+ +E E GD+L+F+TG+D+IE
Sbjct: 252 QFPVQIYYTEEIQKDYVDAALITVLQIHIAHLTDKSINKEEEEDGGDILVFLTGRDEIEN 311
Query: 229 LVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLT 288
L L D+I L GS D ++ P+ +LP E Q++VF P R+ I++TNIAETSLT
Sbjct: 312 LEKLLLDRIPRLPVGS-KDLIVCPIFSALPQEQQMKVFEKAPKGSRKVILATNIAETSLT 370
Query: 289 VDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTV 348
++G+ YV+D G VK + +NP G+ SL+++ ISK A QR GRAGR GKCYRLY
Sbjct: 371 INGIRYVVDSGAVKSKIFNPKIGIDSLNIIPISKASAKQRTGRAGREFEGKCYRLYTQET 430
Query: 349 YHDEFLDVT-VPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLI 407
+ E LD + +PEI+RS++A +L LK++ ++DI L FDFL+ P S+ +L+ L+ +
Sbjct: 431 F--EKLDTSSIPEIKRSNIANVILQLKTIGINDI--LSFDFLESPPVASVIKSLELLFCL 486
Query: 408 DAIDENGSITSIGRTMA 424
DAI +NGS+T +G+ MA
Sbjct: 487 DAISDNGSLTELGKKMA 503
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 952 (340.2 bits), Expect = 9.7e-96, P = 9.7e-96
Identities = 197/422 (46%), Positives = 275/422 (65%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPXXXXX 62
LP+ + +E +GETGSGK+TQ+ Q + G + G ++GVTQP
Sbjct: 77 LPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGLIRPGKMVGVTQPRRVAA 136
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E+ LGEEVGY+IRFE+ +S RT +KYLTDG+LLRE +S+P L+ Y VII
Sbjct: 137 ISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDGMLLRESMSDPTLNKYDVII 196
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+L+TDIL GL+K ++ R LK+++ SATL+ K K+F N P + VPG+L+
Sbjct: 197 LDEAHERTLSTDILFGLIKDILK-RRKDLKLIVMSATLEAGKFQKYFENAPLIKVPGRLH 255
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVEI +++E YLESA++T IDIH E GD+L+F+TG+++IE +K++ + R E
Sbjct: 256 PVEIFYTEEAAKDYLESAVRTVIDIHTNEGTGDILVFLTGEEEIEDTCAKIQRETR---E 312
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
LPL+ SLP Q ++F R+ IVSTNIAETSLT+DG+V+V+D G+ K
Sbjct: 313 RGLPPMKTLPLYSSLPIYQQSKIFDTCKE--RKCIVSTNIAETSLTIDGIVFVVDPGFSK 370
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q+ YNP S + SL V ISK ANQR GRAGRTRPGKC+RLY + + + T PEI
Sbjct: 371 QKTYNPRSRVESLLVAPISKASANQRAGRAGRTRPGKCFRLYTEKAFKELMIQQTHPEIL 430
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
RS+LA VL L L L ++++ FDF+DPP ++L AL+ L+ + A+D+ G +T IG
Sbjct: 431 RSNLASVVLQL--LKLGVVDLVHFDFMDPPVPDTLIRALEVLHYLGALDDEGQLTEIGSI 488
Query: 423 MA 424
M+
Sbjct: 489 MS 490
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 952 (340.2 bits), Expect = 9.7e-96, P = 9.7e-96
Identities = 195/436 (44%), Positives = 282/436 (64%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQ------ILHRHGYTKSGIIGVTQ 56
+LP+ ++ +GETGSGK+TQ+ Q + + ++G TQ
Sbjct: 64 DLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKWLVGCTQ 123
Query: 57 PXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLS 116
P E+ V +GEEVGY+IRFED TS RT++KYLTDG+LLRE +++P L
Sbjct: 124 PRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAMADPLLE 183
Query: 117 PYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLN 176
Y VIILDEAHER+L TD+L GL+K ++ R LK+++ SATL+ EK ++FS P +
Sbjct: 184 RYKVIILDEAHERTLATDVLFGLLKEVLRNRPD-LKLVVMSATLEAEKFQEYFSGAPLMK 242
Query: 177 VPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDK 236
VPG+L+PVEI +++E YLE+A++T + IH+ EP GD+L+F+TG+++IE K+ +
Sbjct: 243 VPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKE 302
Query: 237 IRSLDEGSCMDAV-ILPLHGSLPPEMQVRVFSPPP-------PNCRRFIVSTNIAETSLT 288
+ +L G + V ++PL+ +LPP MQ ++F P P P R+ +VSTNIAETSLT
Sbjct: 303 VSNL--GDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAETSLT 360
Query: 289 VDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTV 348
+DG+VYVID G+ KQ+ YNP + SL V ISK A+QR GRAGRTRPGKC+RLY
Sbjct: 361 IDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKS 420
Query: 349 YHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLID 408
++++ T PEI RS+LA +VL LK L + D+ + FDF+DPP+ E+L AL+ L +
Sbjct: 421 FNNDLQPQTYPEILRSNLANTVLTLKKLGIDDL--VHFDFMDPPAPETLMRALEVLNYLG 478
Query: 409 AIDENGSITSIGRTMA 424
A+D+ G++T G M+
Sbjct: 479 ALDDEGNLTKTGEIMS 494
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 946 (338.1 bits), Expect = 4.2e-95, P = 4.2e-95
Identities = 194/435 (44%), Positives = 282/435 (64%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQIL------HRHGYTKSGIIGVTQP 57
LP+ +E +GETGSGK+TQ+ Q + + ++G TQP
Sbjct: 61 LPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRKWLVGCTQP 120
Query: 58 XXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSP 117
+E+ V +GEEVGY+IRFED +S RT++KYLTDG+LLRE +++P L
Sbjct: 121 RRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAMADPLLER 180
Query: 118 YSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNV 177
Y VIILDEAHER+L TD+L GL+K ++ R LK+++ SATL+ EK +FS P + V
Sbjct: 181 YKVIILDEAHERTLATDVLFGLLKEVLKNRPD-LKLVVMSATLEAEKFQDYFSGAPLMKV 239
Query: 178 PGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKI 237
PG+L+PVEI +++E YLE+A++T + IH+ EP GD+L+F+TG+++IE K+ ++
Sbjct: 240 PGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKEV 299
Query: 238 RSLDEGSCMDAV-ILPLHGSLPPEMQVRVFSPPP-------PNCRRFIVSTNIAETSLTV 289
+L G + + ++PL+ +LPP MQ ++F P P P R+ +VSTNIAETSLT+
Sbjct: 300 GNL--GDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIVVSTNIAETSLTI 357
Query: 290 DGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVY 349
DG+VYVID G+ KQ+ YNP + SL V ISK A+QR GRAGRTRPGKC+RLY +
Sbjct: 358 DGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSF 417
Query: 350 HDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDA 409
+++ T PEI RS+LA +VL LK L + D+ + FDF+DPP+ E+L AL+ L + A
Sbjct: 418 NNDLQPQTYPEILRSNLANTVLTLKKLGIDDL--VHFDFMDPPAPETLMRALEVLNYLGA 475
Query: 410 IDENGSITSIGRTMA 424
+D++G++T G M+
Sbjct: 476 LDDDGNLTKTGEIMS 490
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 936 (334.5 bits), Expect = 4.8e-94, P = 4.8e-94
Identities = 193/429 (44%), Positives = 276/429 (64%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQ-ILHRHGYTKSGI-IGVTQPXXX 60
+LP+ E +GETGSGK+TQ+ Q +L+ +G + TQP
Sbjct: 93 DLPVHAQREEFLKIFHSTQIMVFVGETGSGKTTQIPQFVLYDEMPHLTGKQVACTQPRRV 152
Query: 61 XXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSV 120
E+ V LGEEVGY IRFE+ + +T++KY+TDG+LLRE + + DL+ YS
Sbjct: 153 AAMSVAARVADEMDVELGEEVGYNIRFENNSGPKTILKYMTDGMLLREAMEDHDLTRYSC 212
Query: 121 IILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGK 180
IILDEAHER+L TDIL+GL+K+ V++R LKI+I SATLD EK +F+N P L VPG+
Sbjct: 213 IILDEAHERTLATDILMGLLKQ-VSVRRPDLKIIIMSATLDAEKFQNYFNNAPLLAVPGR 271
Query: 181 LYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLE-DKIRS 239
+PVEI ++ E YL++A++T + IH E EGD+L+F+TG+++IE K+ +
Sbjct: 272 THPVEIYYTPEFQRDYLDAAIRTVLQIHATEGEGDILLFLTGEEEIEDACRKISLEGDEL 331
Query: 240 LDEGSCMDAVILPLHGSLPPEMQVRVFSPPP----PNC---RRFIVSTNIAETSLTVDGV 292
+ E +C + PL+GSLPP Q ++F P P PN R+ I+STNIAETSLT+DG+
Sbjct: 332 VREQNCGPLKVYPLYGSLPPHQQQKIFEPAPTNPNPNGRPGRKVIISTNIAETSLTIDGI 391
Query: 293 VYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDE 352
VYV+D G+ KQ+ YNP + SL V ISK A QR GRAGRTRPGKC+RLY + E
Sbjct: 392 VYVVDPGFSKQKVYNPRVRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFKKE 451
Query: 353 FLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDE 412
++ + PEI RS+L+ +VL LK L + D+ + FDF+DPP+ E++ AL++L + + +
Sbjct: 452 LIEQSYPEILRSNLSSTVLELKKLGIDDL--VHFDFMDPPAPETMMRALEELNYLQCLSD 509
Query: 413 NGSITSIGR 421
G +T++GR
Sbjct: 510 EGDLTALGR 518
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 936 (334.5 bits), Expect = 4.8e-94, P = 4.8e-94
Identities = 186/424 (43%), Positives = 280/424 (66%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI--IGVTQPXXXX 61
LP+ QY++ + +GETGSGK+TQL Q L G+T G I +TQP
Sbjct: 223 LPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQGKLQIAITQPRRVA 282
Query: 62 XXXXXXXXXQELGVRLGEEVGYAIRFEDRTS-ERTLIKYLTDGVLLREILSNPDLSPYSV 120
E+ V LG+EVGY IRFED+T+ +T++KY+TDG+LLRE L++ LS YS
Sbjct: 283 ATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLTDSKLSKYSC 342
Query: 121 IILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGK 180
I++DEAHER+L TDIL+GL+K ++ R + LK+LI+SAT++ +K S+FF NCP NVPG+
Sbjct: 343 IMIDEAHERTLATDILIGLLKDILPQRPT-LKLLISSATMNAKKFSEFFDNCPIFNVPGR 401
Query: 181 LYPVEILHSKERPTSYLESALKTAIDIHVREP-EGDVLIFMTGQDDIEKLVSKLEDKIRS 239
YPV+I ++ + +Y+ +A+ T IH + GD+L+F+TGQ++IE+ +KLE+ +
Sbjct: 402 RYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDILVFLTGQEEIERTKTKLEEIMSK 461
Query: 240 LDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCG 299
L + +I P++ +LP E Q+++F P P NCR+ +++TNIAETSLT+DG+ YVID G
Sbjct: 462 LGSRT-KQMIITPIYANLPQEQQLKIFQPTPENCRKVVLATNIAETSLTIDGIRYVIDPG 520
Query: 300 YVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVP 359
+VK+ Y PS+GM L V S+ +QR GRAGR PGKC+R++ Y E + P
Sbjct: 521 FVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKCFRIFTKWSYLHELELMPKP 580
Query: 360 EIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSI 419
EI R++L+ +VL L SL ++D+ +KF +D PS +L +L+ LY++ A++ G+IT +
Sbjct: 581 EITRTNLSNTVLLLLSLGVTDL--IKFPLMDKPSIPTLRKSLENLYILGALNSKGTITRL 638
Query: 420 GRTM 423
G+ M
Sbjct: 639 GKMM 642
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 928 (331.7 bits), Expect = 3.4e-93, P = 3.4e-93
Identities = 194/444 (43%), Positives = 282/444 (63%)
Query: 5 PILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXX 64
PI + + I G TGSGK+TQL + L+ G+++ G+IGVTQP
Sbjct: 54 PIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAIS 113
Query: 65 XXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILD 124
+E+ LG +VGY +RF+D +S+ T IKY+TDG LL+ IL +P+L+ +SVIILD
Sbjct: 114 VAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILD 173
Query: 125 EAHERSLNTDILLGLVKRLVNL----RASKLKILITSATLDGEKVSKFFSNCPTLNVPGK 180
EAHER+L TDIL GL+K+L R LK+++ SAT++ K+S FF NCP ++PG+
Sbjct: 174 EAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGR 233
Query: 181 LYPVE-----ILHSKERP-TSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLE 234
LYPV ++ ++R T+Y+++ +K +DIH+ E GD+L+F+TGQ +IEK L
Sbjct: 234 LYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLF 293
Query: 235 DKIRSLD-----EGSCMDAV-ILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLT 288
S+D + + +D + ILP +GS+ + Q R+F PPPP R+ ++STNI+ TSLT
Sbjct: 294 QMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLT 353
Query: 289 VDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTV 348
+DG+ YV+D G+VKQ +NP G+ L+VV ISK +A QR GRAGRT GKC+R+Y
Sbjct: 354 IDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDF 413
Query: 349 YHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLID 408
++ D +PEI+R+SL VL LK L + D V++F +LDPP+ + +ALKQLY D
Sbjct: 414 WNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHD--VIRFPYLDPPNERLILEALKQLYQCD 471
Query: 409 AIDENGSITSIGRTMAGTSFFALP 432
AID +G +T +G +M F LP
Sbjct: 472 AIDRSGHVTRLGLSMVE---FPLP 492
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 927 (331.4 bits), Expect = 4.3e-93, P = 4.3e-93
Identities = 192/422 (45%), Positives = 276/422 (65%)
Query: 27 GETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIR 86
G TGSGK+TQL + L+ G+++ G+IGVTQP +E+ LG +VGY +R
Sbjct: 76 GNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVR 135
Query: 87 FEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVN- 145
F+D +S+ T IKY+TDG LL+ IL +P+LS +SVIILDEAHER+L TDIL GL+K+L
Sbjct: 136 FDDCSSKETAIKYMTDGCLLKHILGDPNLSKFSVIILDEAHERTLTTDILFGLLKKLFQD 195
Query: 146 ---LRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVE-----ILHSKERP-TSY 196
R LK+++ SAT++ K+S FF NCP ++PG+LYPV ++ ++R T+Y
Sbjct: 196 KSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAY 255
Query: 197 LESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLD-----EGSCMDAV-I 250
+++ +K +DIH+ E GD+L+F+TGQ +IEK L S+D + + +D + I
Sbjct: 256 IQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLI 315
Query: 251 LPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSS 310
LP +GS+ + Q R+F PPPP R+ ++STNI+ TSLT+DG+ YV+D G+VKQ +NP
Sbjct: 316 LPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRL 375
Query: 311 GMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSV 370
G+ L+VV ISK +A QR GRAGRT GKC+R+Y + D +PEI+R+SL V
Sbjct: 376 GLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKEFWSQCMPDHVIPEIKRTSLTSVV 435
Query: 371 LYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMAGTSFFA 430
L LK L + D V++F +LDPP+ + +ALKQLY DAID +G +T +G +M F
Sbjct: 436 LTLKCLAIHD--VIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVE---FP 490
Query: 431 LP 432
LP
Sbjct: 491 LP 492
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 926 (331.0 bits), Expect = 5.5e-93, P = 5.5e-93
Identities = 191/422 (45%), Positives = 277/422 (65%)
Query: 27 GETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIR 86
G TGSGK+TQL + L+ G+++ G+IGVTQP +E+ LG +VGY +R
Sbjct: 76 GNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVR 135
Query: 87 FEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNL 146
F+D +S+ T IKY+TDG LL+ IL +P+L+ +SVIILDEAHER+L TDIL GL+K+L
Sbjct: 136 FDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQE 195
Query: 147 ----RASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVE-----ILHSKERP-TSY 196
R LK+++ SAT++ K+S FF NCP ++PG+LYPV ++ ++R T+Y
Sbjct: 196 KSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAY 255
Query: 197 LESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLD-----EGSCMDAV-I 250
+++ +K +DIH+ E GD+L+F+TGQ +IEK L S+D + + +D + I
Sbjct: 256 IQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLI 315
Query: 251 LPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSS 310
LP +GS+ + Q R+F PPPP R+ ++STNI+ TSLT+DG+ YV+D G+VKQ +NP
Sbjct: 316 LPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRL 375
Query: 311 GMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSV 370
G+ L+VV ISK +A QR GRAGRT GKC+R+Y ++ D +PEI+R+SL V
Sbjct: 376 GLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVV 435
Query: 371 LYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMAGTSFFA 430
L LK L + D V++F +LDPP+ + +ALKQLY DAID +G +T +G +M F
Sbjct: 436 LTLKCLAIHD--VIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVE---FP 490
Query: 431 LP 432
LP
Sbjct: 491 LP 492
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 926 (331.0 bits), Expect = 5.5e-93, P = 5.5e-93
Identities = 191/422 (45%), Positives = 277/422 (65%)
Query: 27 GETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIR 86
G TGSGK+TQL + L+ G+++ G+IGVTQP +E+ LG +VGY +R
Sbjct: 76 GNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCALGSKVGYQVR 135
Query: 87 FEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNL 146
F+D +S+ T IKY+TDG LL+ IL +P+L+ +SVIILDEAHER+L TDIL GL+K+L
Sbjct: 136 FDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQE 195
Query: 147 ----RASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVE-----ILHSKERP-TSY 196
R LK+++ SAT++ K+S FF NCP ++PG+LYPV ++ ++R T+Y
Sbjct: 196 KSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAY 255
Query: 197 LESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLD-----EGSCMDAV-I 250
+++ +K +DIH+ E GD+L+F+TGQ +IEK L S+D + + +D + I
Sbjct: 256 IQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLI 315
Query: 251 LPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSS 310
LP +GS+ + Q R+F PPPP R+ ++STNI+ TSLT+DG+ YV+D G+VKQ +NP
Sbjct: 316 LPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRL 375
Query: 311 GMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSV 370
G+ L+VV ISK +A QR GRAGRT GKC+R+Y ++ D +PEI+R+SL V
Sbjct: 376 GLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVV 435
Query: 371 LYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMAGTSFFA 430
L LK L + D V++F +LDPP+ + +ALKQLY DAID +G +T +G +M F
Sbjct: 436 LTLKCLAIHD--VIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVE---FP 490
Query: 431 LP 432
LP
Sbjct: 491 LP 492
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 926 (331.0 bits), Expect = 5.5e-93, P = 5.5e-93
Identities = 191/422 (45%), Positives = 277/422 (65%)
Query: 27 GETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIR 86
G TGSGK+TQL + L+ G+++ G+IGVTQP +E+ LG +VGY +R
Sbjct: 154 GNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCALGSKVGYQVR 213
Query: 87 FEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNL 146
F+D +S+ T IKY+TDG LL+ IL +P+L+ +SVIILDEAHER+L TDIL GL+K+L
Sbjct: 214 FDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQE 273
Query: 147 ----RASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVE-----ILHSKERP-TSY 196
R LK+++ SAT++ K+S FF NCP ++PG+LYPV ++ ++R T+Y
Sbjct: 274 KSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAY 333
Query: 197 LESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLD-----EGSCMDAV-I 250
+++ +K +DIH+ E GD+L+F+TGQ +IEK L S+D + + +D + I
Sbjct: 334 IQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLI 393
Query: 251 LPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSS 310
LP +GS+ + Q R+F PPPP R+ ++STNI+ TSLT+DG+ YV+D G+VKQ +NP
Sbjct: 394 LPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRL 453
Query: 311 GMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSV 370
G+ L+VV ISK +A QR GRAGRT GKC+R+Y ++ D +PEI+R+SL V
Sbjct: 454 GLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVV 513
Query: 371 LYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMAGTSFFA 430
L LK L + D V++F +LDPP+ + +ALKQLY DAID +G +T +G +M F
Sbjct: 514 LTLKCLAIHD--VIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVE---FP 568
Query: 431 LP 432
LP
Sbjct: 569 LP 570
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 926 (331.0 bits), Expect = 5.5e-93, P = 5.5e-93
Identities = 191/422 (45%), Positives = 277/422 (65%)
Query: 27 GETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIR 86
G TGSGK+TQL + L+ G+++ G+IGVTQP +E+ LG +VGY +R
Sbjct: 76 GNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVR 135
Query: 87 FEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNL 146
F+D +S+ T IKY+TDG LL+ IL +P+L+ +SVIILDEAHER+L TDIL GL+K+L
Sbjct: 136 FDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQE 195
Query: 147 ----RASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVE-----ILHSKERP-TSY 196
R LK+++ SAT++ K+S FF NCP ++PG+LYPV ++ ++R T+Y
Sbjct: 196 KSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAY 255
Query: 197 LESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLD-----EGSCMDAV-I 250
+++ +K +DIH+ E GD+L+F+TGQ +IEK L S+D + + +D + I
Sbjct: 256 IQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLI 315
Query: 251 LPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSS 310
LP +GS+ + Q R+F PPPP R+ ++STNI+ TSLT+DG+ YV+D G+VKQ +NP
Sbjct: 316 LPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRL 375
Query: 311 GMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSV 370
G+ L+VV ISK +A QR GRAGRT GKC+R+Y ++ D +PEI+R+SL V
Sbjct: 376 GLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVV 435
Query: 371 LYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMAGTSFFA 430
L LK L + D V++F +LDPP+ + +ALKQLY DAID +G +T +G +M F
Sbjct: 436 LTLKCLAIHD--VIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVE---FP 490
Query: 431 LP 432
LP
Sbjct: 491 LP 492
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 926 (331.0 bits), Expect = 5.5e-93, P = 5.5e-93
Identities = 186/429 (43%), Positives = 280/429 (65%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQ-ILHRH-GYTKSGIIGVTQPXXX 60
NLP+ Q+ + +GETGSGK+TQ+ Q +L+ + ++ TQP
Sbjct: 106 NLPVHQHRQEFLDVYHKTQIMVFVGETGSGKTTQIPQYVLYDELPHLNKKMVACTQPRRV 165
Query: 61 XXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSV 120
EL V LG+EVGY+IRFE++T+ T++KY+TDG LLRE + +P+++ YS
Sbjct: 166 AAMSVAQRVADELDVELGQEVGYSIRFENKTTPSTILKYMTDGQLLRETIHDPNMTRYSC 225
Query: 121 IILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGK 180
II+DEAHER+L TDIL+ L+K+L +LR S LKI+I SATLD K ++F P L VPG+
Sbjct: 226 IIIDEAHERTLATDILMALLKQL-SLRRSDLKIIIMSATLDAAKFQRYFFEAPILAVPGR 284
Query: 181 LYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSL 240
+PVEI ++ E Y+E++++T + IH E EGD+L+F+TG+++IE + K+ ++ L
Sbjct: 285 THPVEIFYTAEAERDYIEASVRTVLQIHATEAEGDILLFLTGEEEIEDVCRKVRLEVDEL 344
Query: 241 -DEGSCMDAVILPLHGSLPPEMQVRVFS--PPP------PNCRRFIVSTNIAETSLTVDG 291
+ C + PL+G+LPP+ Q ++F+ PPP P R+ IV+TNIAETSLT+DG
Sbjct: 345 IRDADCGPMEVYPLYGTLPPQQQQKIFNAAPPPLKKGGRPG-RKCIVATNIAETSLTIDG 403
Query: 292 VVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHD 351
+VYV+D G+ KQ+ YN + SL V IS+ A QR GRAGRTRPGKC+RLY +
Sbjct: 404 IVYVVDPGFSKQKIYNARIRVESLLVTPISRASAQQRAGRAGRTRPGKCFRLYTEAAFKK 463
Query: 352 EFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAID 411
E ++ T PEI RS+L+ ++L LK L + D+ + FDF+DPP+ E++ AL++L + ++
Sbjct: 464 ELIEQTYPEILRSNLSNTILELKKLGVDDL--VHFDFMDPPAPETMMRALEELNYLSCLN 521
Query: 412 ENGSITSIG 420
++G +T +G
Sbjct: 522 DDGDLTDLG 530
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 926 (331.0 bits), Expect = 5.5e-93, P = 5.5e-93
Identities = 191/422 (45%), Positives = 277/422 (65%)
Query: 27 GETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIR 86
G TGSGK+TQL + L+ G+++ G+IGVTQP +E+ LG +VGY +R
Sbjct: 76 GNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVR 135
Query: 87 FEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVN- 145
F+D +S+ T IKY+TDG LL+ IL +P+L+ +SVIILDEAHER+L TDIL GL+K+L
Sbjct: 136 FDDCSSKETAIKYMTDGCLLKHILGDPNLNKFSVIILDEAHERTLTTDILFGLLKKLFQD 195
Query: 146 ---LRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVE-----ILHSKERP-TSY 196
R LK+++ SAT++ K+S FF NCP ++PG+LYPV ++ ++R T+Y
Sbjct: 196 KSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAY 255
Query: 197 LESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLD-----EGSCMDAV-I 250
+++ +K +DIH+ E GD+L+F+TGQ +IEK L S+D + + +D + I
Sbjct: 256 IQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLI 315
Query: 251 LPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSS 310
LP +GS+ + Q R+F PPPP R+ ++STNI+ TSLT+DG+ YV+D G+VKQ +NP
Sbjct: 316 LPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRL 375
Query: 311 GMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSV 370
G+ L+VV ISK +A QR GRAGRT GKC+R+Y ++ D +PEI+R+SL V
Sbjct: 376 GLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVV 435
Query: 371 LYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMAGTSFFA 430
L LK L + D V++F +LDPP+ + +ALKQLY DAID +G +T +G +M F
Sbjct: 436 LTLKCLAIHD--VIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVE---FP 490
Query: 431 LP 432
LP
Sbjct: 491 LP 492
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 910 (325.4 bits), Expect = 2.7e-91, P = 2.7e-91
Identities = 189/438 (43%), Positives = 284/438 (64%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPXXXXX 62
LPI +++++I +G+TGSGK+TQL Q L + G+ G I VTQP
Sbjct: 22 LPIARHKQSILYLVETYPVTIVVGQTGSGKTTQLPQYLDQAGWCTEGKAIAVTQPRRVAA 81
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E+ +LGE+VGY+IRFEDRTS T IK+LTDG+LLRE L +P LS YSVI+
Sbjct: 82 TTVAARVAEEMRCKLGEDVGYSIRFEDRTSAMTRIKFLTDGMLLREALVDPLLSRYSVIM 141
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPT-------- 174
+DEAHERSL+TDILLG++K+++ R +L+I+++SATL E ++F+ +
Sbjct: 142 VDEAHERSLSTDILLGILKKILK-RRPELRIIVSSATLQAEDFLRYFAGDESQQGPNGEV 200
Query: 175 -------LNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIE 227
+++ G++YPV+ L + +Y+E ++KT DIH++E EGD+LIF+TG+++IE
Sbjct: 201 GGNTGKIISIEGRMYPVDTLFLESAAENYVERSVKTVFDIHLQEGEGDILIFLTGREEIE 260
Query: 228 KLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSL 287
+ + ++ +L S + LPL+ L + Q+ VF P P N R+ +VSTNIAE S+
Sbjct: 261 TAIQLISERATTLHPKS-QSLLPLPLYAGLTTDQQMYVFEPAPENTRKVVVSTNIAEASV 319
Query: 288 TVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPST 347
T++G+VYV+DCG+ K R Y+PS+G+ +L V ISK A QR GRAGRT+PGKC+RLY
Sbjct: 320 TINGIVYVVDCGFAKLRAYDPSTGIETLTAVPISKAAAVQRAGRAGRTKPGKCFRLYTQH 379
Query: 348 VYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLI 407
Y ++ D T+PEIQRS+LA ++ LK+L + N+++FDFL P ++ + A + LY +
Sbjct: 380 AY-EQLPDATIPEIQRSNLAPVIMQLKALGID--NIVRFDFLTSPPADLVIRAFELLYSL 436
Query: 408 DAIDENGSITS-IGRTMA 424
AID+ +T +G MA
Sbjct: 437 GAIDDYAKLTKPLGMRMA 454
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 897 (320.8 bits), Expect = 6.5e-90, P = 6.5e-90
Identities = 190/439 (43%), Positives = 275/439 (62%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPXXXXX 62
LPI ++++++ +G+TGSGK+TQ+ Q L + G+ G +IGVTQP
Sbjct: 21 LPIARHKDSLLYVVESNPVTVVVGQTGSGKTTQIPQFLEKAGWCSDGKLIGVTQPRRIAA 80
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E G +G+EVGY+IRFED TSE T IK+LTDG+L+RE L +P LS YS+++
Sbjct: 81 TTVALRVAEEYGSEVGKEVGYSIRFEDVTSEATRIKFLTDGLLIREALVDPLLSRYSIVM 140
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNC---------- 172
+DEAHERS++TDILLGL+K++ R +L+I+I+SATL E+ FFS+
Sbjct: 141 VDEAHERSVSTDILLGLLKKIRKKRP-ELRIIISSATLQAEQFLAFFSSTLGGSRQDREE 199
Query: 173 PT------LNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDI 226
P +++ G+ YP++IL+ + YL+ A+ T +D+H EP+GD+L+F+TG+D+I
Sbjct: 200 PQGTIGTIVSLEGRTYPIDILYLESPAEDYLQRAVSTVLDVHENEPDGDILVFLTGRDEI 259
Query: 227 EKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETS 286
E V + ++ L + LPL L E Q+ +F P N R+ I STNIAE S
Sbjct: 260 EAAVDAVSERTAHLTSQD-RGLLPLPLFSGLSTEQQMYIFEEAPANTRKVIFSTNIAEAS 318
Query: 287 LTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPS 346
+T+ G+VYV+D G+VK R YNP +G+ +L V ISK A QR GRAGRT+PGKC+RLY
Sbjct: 319 VTISGIVYVVDSGFVKLRAYNPKTGIETLTAVPISKAAAAQRAGRAGRTKPGKCFRLYTE 378
Query: 347 TVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYL 406
Y D +PE+QRS+LA +L LK+L + NVL FDFL PP +E + AL+ LY
Sbjct: 379 ESY-TSLSDTNIPEVQRSNLAPFILQLKALGID--NVLHFDFLTPPPAELMTKALELLYS 435
Query: 407 IDAIDENGSITS-IGRTMA 424
+ A+D+ +T +G MA
Sbjct: 436 LGALDDYAKLTKPLGLRMA 454
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 896 (320.5 bits), Expect = 8.3e-90, P = 8.3e-90
Identities = 192/438 (43%), Positives = 277/438 (63%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGY----TKSG---IIGVT 55
+LP + IGETGSGK+TQL+Q L+ G+ K+G II T
Sbjct: 357 SLPAFAVRNDLLTTIRDNQVTIVIGETGSGKTTQLTQFLYEDGFGANIDKNGEKRIIACT 416
Query: 56 QPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRT-SERTLIKYLTDGVLLREILSNPD 114
QP +E+ +LGEEVGY+IRFED+T +++T+IKY+T+G+LLREIL++P
Sbjct: 417 QPRRVAAMSVAKRVSEEMNCKLGEEVGYSIRFEDKTDNKKTVIKYMTEGILLREILADPM 476
Query: 115 LSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPT 174
L+ YS II+DEAHERSLNTDILLGL K L+ R LK+++TSAT++ + +KFF P
Sbjct: 477 LANYSCIIMDEAHERSLNTDILLGLFKNLLAKRKD-LKLIVTSATMNANRFTKFFGVAPQ 535
Query: 175 LNVPGKLYPVEILHSKERPTSYLESALKTAIDIHV--------REPEGDVLIFMTGQDDI 226
++PG+ +PVE+ +++ Y+E A+K + IH+ +GD+L+FMTGQ+DI
Sbjct: 536 FHIPGRTFPVEVFFNRDVNMDYVEMAVKQVLTIHLGRWNADNNNANDGDILVFMTGQEDI 595
Query: 227 EKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETS 286
E +++K+ L++ +D I P++ ++P ++Q ++F+ R+ +V+TNIAETS
Sbjct: 596 EITCDLIKEKLNLLEDPPPLD--IFPIYSTMPQDLQKKIFNKTNLQRRKVVVATNIAETS 653
Query: 287 LTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPS 346
LTVDG+ YVIDCG VK + YNP GM +L VV IS A+QR GRAGRT G YRLY
Sbjct: 654 LTVDGIKYVIDCGLVKVKVYNPKLGMDTLQVVPISLANADQRSGRAGRTGAGIAYRLYTE 713
Query: 347 TVYHDEFLDVT-VPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLY 405
+ + V +PEIQRS+L+ +L LKSL ++DIN F FLDPP + L +L L+
Sbjct: 714 KATEPDSMYVQPIPEIQRSNLSNIMLLLKSLKVNDIN--SFPFLDPPPKDLLNCSLYDLW 771
Query: 406 LIDAIDENGSITSIGRTM 423
I A+D G +T +G +M
Sbjct: 772 AIGALDNLGELTKLGHSM 789
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 890 (318.4 bits), Expect = 3.6e-89, P = 3.6e-89
Identities = 191/434 (44%), Positives = 269/434 (61%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYT--KSGIIGVTQPXXXX 61
LP+ + + IGETGSGK+TQL+Q L+ GY + I VTQP
Sbjct: 350 LPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIVVTQPRRVA 409
Query: 62 XXXXXXXXXQELGVRLGEEVGYAIRFEDRT-SERTLIKYLTDGVLLREILSNPDLSPYSV 120
E+ V LG+EVGY+IRFED T SE T +K++TDG+LLRE L + L YS
Sbjct: 410 AISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDDTLDKYSC 469
Query: 121 IILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGK 180
+I+DEAHERSLNTDILLG K L+ R LK++ITSAT++ +K S FF N P +PG+
Sbjct: 470 VIIDEAHERSLNTDILLGFFKILL-ARRRDLKLIITSATMNAKKFSAFFGNAPQFTIPGR 528
Query: 181 LYPVEILHSKERPTSYLESALKTAIDIHVREP--EGDVLIFMTGQDDIEKLVSKLEDK-- 236
+PV+ +++ Y+E+A+ A+ IH+ GD+LIFMTGQ+DIE L++K
Sbjct: 529 TFPVQTIYTSNPVQDYVEAAVSQAVKIHLANDCSSGDILIFMTGQEDIETTFDTLQEKFL 588
Query: 237 -IRSLDEGSCM-----DAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVD 290
+ S G+ D ILP++ +LP ++Q ++F R+ I++TNIAETSLT+
Sbjct: 589 QVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGTKRKIIIATNIAETSLTIK 648
Query: 291 GVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYH 350
G+ YVIDCGY K + YNP G+ SL + ISK A+QR GRAGRT PG YRLY +
Sbjct: 649 GIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTAYRLYTEDTFK 708
Query: 351 DEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI 410
++ T+PEIQR++L+ ++L LKSLD++D + KF F+D P ++ +L +L+ I AI
Sbjct: 709 EDMYLQTIPEIQRTNLSNTLLLLKSLDVTD-ELSKFPFIDKPPLQTFLSSLYELWFIGAI 767
Query: 411 DENGSITSIGRTMA 424
D +G +T +G MA
Sbjct: 768 DTSGQLTPLGLQMA 781
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 888 (317.7 bits), Expect = 5.9e-89, P = 5.9e-89
Identities = 184/422 (43%), Positives = 265/422 (62%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
NLPI + +T+ +GETGSGKSTQ+ Q L+ Y + G + +TQP
Sbjct: 95 NLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPYAQEGCVAITQPRRVAA 154
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
E G RLGE+VGY+IRF+D TS++T IKYLTDG+LLRE++++P LS Y +I
Sbjct: 155 VNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGMLLRELINDPILSQYHTLI 214
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+L TD+LLG VK+++ R + L+++I SATL+ E+ S+FF + G+ Y
Sbjct: 215 LDEAHERTLMTDMLLGFVKKIIKKRPA-LRVIIMSATLNAERFSEFFDGAEICYISGRQY 273
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PV+I ++ YL++ L+T +H + P GD+L+F+TGQD+IE L + ++ + L
Sbjct: 274 PVQIHYTYTPEPDYLDACLRTIFQLHTKLPPGDILVFLTGQDEIEALEALIKSYSKQLPS 333
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ PL SLP E Q++VF P N R+ ++STNIAETS+T+ G+ YVID G K
Sbjct: 334 -NLPQIQACPLFASLPQEQQLQVFLPALANHRKVVLSTNIAETSVTISGIRYVIDTGLAK 392
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
+Q+N G+ SL V IS+ A QR GRAGR G+CYR+Y + D+ T+PEI+
Sbjct: 393 IKQFNSKLGLESLTVQPISQSAAMQRSGRAGREAAGQCYRIYTEADF-DKLPKETIPEIK 451
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R L+ +VL LK+ +D V+ F ++DPPS E L AL+ LY I A+D+NG I +G
Sbjct: 452 RIDLSQAVLTLKARGQND--VINFHYMDPPSKEGLLRALEHLYSIGALDDNGHINDLGYQ 509
Query: 423 MA 424
M+
Sbjct: 510 MS 511
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 569 (205.4 bits), Expect = 6.3e-89, Sum P(2) = 6.3e-89
Identities = 116/288 (40%), Positives = 186/288 (64%)
Query: 138 GLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERPTSYL 197
G++K + S LK++I SA+LD S++F ++V G+ +PV+IL++ + Y+
Sbjct: 216 GVLKGYQGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYTVHPESDYV 275
Query: 198 ESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSL 257
++ L T IH E GD+L+F+TGQD+IE + ++++++++ E + L + +L
Sbjct: 276 DATLVTIFQIHFEEKPGDILVFLTGQDEIESVERLVQERLQNIPEDK-RKLLPLAIFSAL 334
Query: 258 PPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDV 317
P E Q++VF+P P R+ I++TNIAETS+T+ G+ YVID G+VK R Y+PS GM SLDV
Sbjct: 335 PSEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDV 394
Query: 318 VQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLD 377
V SK Q QR GRAGR PGK +RLYP + ++ D T PEI+R +L+ +L LK+L
Sbjct: 395 VPASKAQTLQRSGRAGREGPGKSFRLYPEREF-EKLEDSTKPEIKRCNLSNIILQLKALG 453
Query: 378 LSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITS-IGRTMA 424
+ DI + FDF+D PS ++ AL +L+ + A+ ++G + + +G M+
Sbjct: 454 IDDI--VGFDFIDKPSRGAIIKALAELHSLGALADDGKLENPVGYQMS 499
Score = 338 (124.0 bits), Expect = 6.3e-89, Sum P(2) = 6.3e-89
Identities = 68/147 (46%), Positives = 97/147 (65%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPXXXX 61
+LPI E+ + +GETGSGK+TQL Q L+ G+ + G +IG+TQP
Sbjct: 40 SLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCREGKMIGITQPRRIA 99
Query: 62 XXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
+E V+LG++VGY+IRF+D TS T +KY+TDG+LLRE L +P LS YSVI
Sbjct: 100 AVTVAKRVAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLREALLDPHLSRYSVI 159
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRA 148
I+DEAH+RS++TD+LL L+K++ R+
Sbjct: 160 IVDEAHDRSVHTDVLLALLKKIQRTRS 186
Score = 42 (19.8 bits), Expect = 9.9e-58, Sum P(2) = 9.9e-58
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 112 NPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILI 155
+P +SP+S+ H RSL + + KRLV K ILI
Sbjct: 22 SPTVSPFSMRQKIAEHRRSLP---IASVEKRLVE-EVQKNDILI 61
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 884 (316.2 bits), Expect = 1.6e-88, P = 1.6e-88
Identities = 188/435 (43%), Positives = 273/435 (62%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPXXXXX 62
LP+ ++ I +GETGSGKSTQ+ Q L G+ G +IGVTQP
Sbjct: 44 LPVFKHRNNILYLVESFQTVVIVGETGSGKSTQIPQYLLEAGWAAEGKVIGVTQPRRVAA 103
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSER-TLIKYLTDGVLLREILSNPDLSPYSVI 121
+E G LG EVGY IRF+D + T IK+LTDG+L+RE++S+P L YSV+
Sbjct: 104 TSVATRVAEERGAFLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMSDPLLKKYSVL 163
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFS----------N 171
ILDEAHER+L TDI +GL+K+++ R L++++ SATLD +K FF+
Sbjct: 164 ILDEAHERTLYTDIAIGLLKKILKKRRD-LRLIVASATLDAKKFQDFFNLNESGDASKDT 222
Query: 172 CPTLNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVS 231
C L V G+ +PV+I ++ Y+++ ++T + IH E +GDVL F+TGQ+++EK+VS
Sbjct: 223 CGILTVEGRTFPVDIFYTVSPVPDYVKATVETVLKIHETEDDGDVLAFLTGQEEVEKVVS 282
Query: 232 KLEDKIRSLDE-GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVD 290
L+++ R+L G +LP++ LP Q+RVF P R+ +V+TNIAETS+T++
Sbjct: 283 LLQEQARTLSRYGMKKHLCVLPMYAGLPYNEQMRVFERMAPTVRKVVVATNIAETSITIN 342
Query: 291 GVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYH 350
GVV+VIDC +VK R YNP + + SL V ISK A QR GRAGR R GKC+RLY +
Sbjct: 343 GVVFVIDCAFVKIRAYNPRTAIESLIVTPISKASACQRAGRAGRNRAGKCFRLYTEEDF- 401
Query: 351 DEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI 410
++ + TVPE+QRS+LA +L LK+L + NVL+F FL PP ++S+ AL+ L+ + +
Sbjct: 402 EKLPESTVPEMQRSNLAPVILQLKALGID--NVLRFSFLSPPPAQSMVQALELLFALGGL 459
Query: 411 DENGSITS-IGRTMA 424
D+ G +T +G MA
Sbjct: 460 DQYGRLTDPMGVRMA 474
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 876 (313.4 bits), Expect = 1.1e-87, P = 1.1e-87
Identities = 182/436 (41%), Positives = 278/436 (63%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LPI QY + I +GETGSGKSTQ+ Q L+ G+ G+IG+T+P
Sbjct: 47 LPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWGWHTKGLIGITEPRRVSTV 106
Query: 64 XXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
QE G +G+ VGY +RF + S T IK++T+G+LLRE+L++P L+ Y VII+
Sbjct: 107 TLANRVAQERGELVGDTVGYVVRFLESMSSCTKIKFMTEGILLREVLADPLLTQYGVIIV 166
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCP-------TLN 176
DEAHER++ TD++LGL+K+++ R+S LK++I+SAT+D S+FFS P L+
Sbjct: 167 DEAHERNMLTDMILGLLKKILRKRSS-LKLIISSATIDASFFSEFFS-WPGSGEVSVKLS 224
Query: 177 VPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDK 236
+ G+++PV + E Y++ ++T +H +EP GD+L F+TGQ+++ + + L +
Sbjct: 225 IEGRMHPVSNFYLNEPCADYVKETVETVWKLHQKEPPGDILAFLTGQEEVLEALDLLREY 284
Query: 237 IRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVI 296
I S ++ + +LP++GS+ Q+ VF PP R+ +++TNIAETS+T+ G+VYVI
Sbjct: 285 IASSEQENLK---VLPMYGSMSSTDQLSVFFTPPKGTRKVVLATNIAETSITIPGIVYVI 341
Query: 297 DCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDV 356
DCGYVK + YNP + SL +V +SK A QR GRAGR RPGK YRLY + Y +
Sbjct: 342 DCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSDY-EALAPR 400
Query: 357 TVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSI 416
PE++RS L+G++L LK+L + N+L+FDF PP +++L AL+ L+ +DAIDE G++
Sbjct: 401 QPPEMRRSELSGAILQLKALGIG--NILRFDFPSPPPAQNLLSALESLFALDAIDEQGNL 458
Query: 417 TS-IGRTMAGTSFFAL 431
T +G +A F A+
Sbjct: 459 TKPVGYLLAELPFSAM 474
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 871 (311.7 bits), Expect = 3.7e-87, P = 3.7e-87
Identities = 187/430 (43%), Positives = 265/430 (61%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
+LPI + + IGETGSGK+TQ+ Q L+ G ++ GII VTQP
Sbjct: 64 SLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVTQPRRVAA 123
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
E LG+ VGY +RFED TSE T IK+LTDG+LLRE +S+ L YS +I
Sbjct: 124 ISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGMLLREAISDSLLRKYSCVI 183
Query: 123 LDEAHERSLNTDILLGLVK----RLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVP 178
LDEAHER+++TD+L G+VK R L LK+++ SAT+D + S++F+ P L +
Sbjct: 184 LDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNRAPVLYLE 243
Query: 179 GKLYPVEILHSKERPTSYLESALKTAIDIHVREPEG-DVLIFMTGQDDIEKLVSKLEDKI 237
G+ +P++I ++K+ YL +AL + IH P D+L+F+TGQ++IE + D
Sbjct: 244 GRQHPIQIFYTKQPQQDYLHAALVSVFQIHQEAPASQDILVFLTGQEEIEAMSKTCRDIA 303
Query: 238 RSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVID 297
R L +G C ++LPL+ SLP Q+RVF P R+ I+STNIAETS+T+ G+ YV+D
Sbjct: 304 RHLPDG-CPSMLVLPLYASLPYSQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVD 362
Query: 298 CGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVT 357
G VK ++YNP SG+ L V ++SK QA QR GRAGR G CYRLY + ++F +T
Sbjct: 363 TGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEF-EKFEKMT 421
Query: 358 VPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI---DENG 414
VPEIQR +LA +L L ++ + NVL FDF+ PS + +E A+ QL L+ A+ D+
Sbjct: 422 VPEIQRCNLASVILQLLAMKVP--NVLTFDFMSKPSPDHIEAAIAQLDLLGALEHKDDQL 479
Query: 415 SITSIGRTMA 424
++T IGR MA
Sbjct: 480 TLTPIGRKMA 489
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 541 (195.5 bits), Expect = 1.3e-86, Sum P(2) = 1.3e-86
Identities = 110/263 (41%), Positives = 166/263 (63%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LPI Y I +GETGSGKSTQL+Q L+ Y G I TQP
Sbjct: 438 LPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKYHMYGNIICTQPRRIACI 497
Query: 64 XXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
+E+ V++G+EVGY IRF+++TSE T I Y+TDG+ LR +L NP L SV+I+
Sbjct: 498 AIANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMTDGMFLRLLLYNPTLEDISVLII 557
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYP 183
DEAHER+L+TD++L +VK + N R + ++++I+SATLD EK+S +F+ P VPG+ Y
Sbjct: 558 DEAHERALHTDVILPIVKDICNFREN-IRVVISSATLDAEKISTYFNCAPIFYVPGRKYN 616
Query: 184 VEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEG 243
V+I ++ ++Y+ + + T + IH+ + +GD+L+F+ GQ +IE + +LE+K+ L
Sbjct: 617 VDIYYTINNESNYISAIVITILQIHITQGKGDILVFLPGQYEIELVQQELENKLNELAP- 675
Query: 244 SCMDAVILPLHGSLPPEMQVRVF 266
+ VILP++ SLP E Q R+F
Sbjct: 676 KYRNLVILPIYSSLPVEYQARIF 698
Score = 365 (133.5 bits), Expect = 1.3e-86, Sum P(2) = 1.3e-86
Identities = 74/151 (49%), Positives = 101/151 (66%)
Query: 274 RRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAG 333
R+ I+STNI ETS+T+D +VYVID G KQ+ YNP+SG+ SL + SK NQR GRAG
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 334 RTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPS 393
R R GKC+RL+ + D D ++PEIQR ++ +L LKSL + DI + FDFLDPPS
Sbjct: 863 RKRDGKCFRLFTKKSFID-LSDNSIPEIQRCEISSMILLLKSLGMDDI--INFDFLDPPS 919
Query: 394 SESLEDALKQLYLIDAIDENGSITSIGRTMA 424
+ L+ LY + A+++ G++T GR MA
Sbjct: 920 PIVIIKGLELLYSLGALNDEGNLTRTGRKMA 950
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 541 (195.5 bits), Expect = 1.3e-86, Sum P(2) = 1.3e-86
Identities = 110/263 (41%), Positives = 166/263 (63%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LPI Y I +GETGSGKSTQL+Q L+ Y G I TQP
Sbjct: 438 LPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKYHMYGNIICTQPRRIACI 497
Query: 64 XXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
+E+ V++G+EVGY IRF+++TSE T I Y+TDG+ LR +L NP L SV+I+
Sbjct: 498 AIANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMTDGMFLRLLLYNPTLEDISVLII 557
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYP 183
DEAHER+L+TD++L +VK + N R + ++++I+SATLD EK+S +F+ P VPG+ Y
Sbjct: 558 DEAHERALHTDVILPIVKDICNFREN-IRVVISSATLDAEKISTYFNCAPIFYVPGRKYN 616
Query: 184 VEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEG 243
V+I ++ ++Y+ + + T + IH+ + +GD+L+F+ GQ +IE + +LE+K+ L
Sbjct: 617 VDIYYTINNESNYISAIVITILQIHITQGKGDILVFLPGQYEIELVQQELENKLNELAP- 675
Query: 244 SCMDAVILPLHGSLPPEMQVRVF 266
+ VILP++ SLP E Q R+F
Sbjct: 676 KYRNLVILPIYSSLPVEYQARIF 698
Score = 365 (133.5 bits), Expect = 1.3e-86, Sum P(2) = 1.3e-86
Identities = 74/151 (49%), Positives = 101/151 (66%)
Query: 274 RRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAG 333
R+ I+STNI ETS+T+D +VYVID G KQ+ YNP+SG+ SL + SK NQR GRAG
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 334 RTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPS 393
R R GKC+RL+ + D D ++PEIQR ++ +L LKSL + DI + FDFLDPPS
Sbjct: 863 RKRDGKCFRLFTKKSFID-LSDNSIPEIQRCEISSMILLLKSLGMDDI--INFDFLDPPS 919
Query: 394 SESLEDALKQLYLIDAIDENGSITSIGRTMA 424
+ L+ LY + A+++ G++T GR MA
Sbjct: 920 PIVIIKGLELLYSLGALNDEGNLTRTGRKMA 950
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 865 (309.6 bits), Expect = 1.6e-86, P = 1.6e-86
Identities = 180/432 (41%), Positives = 266/432 (61%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LPI Q + IGETGSGK+TQ+ Q L+ G + GII VTQP
Sbjct: 24 LPIFQARGPLLSQLRGLECAVLIGETGSGKTTQIPQYLYEAGIGRQGIIAVTQPRRVAAI 83
Query: 64 XXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
E LG+ VGY +RF+D TS+ T IK+LTDG+LLRE + +P L YSV+IL
Sbjct: 84 SLATRVSDEKRTELGKLVGYTVRFDDLTSDETRIKFLTDGMLLREAIGDPILRKYSVVIL 143
Query: 124 DEAHERSLNTDILLGLVKRLVNLRAS----KLKILITSATLDGEKVSKFFSNCPTLNVPG 179
DEAHER+++TD+L G+VK R LK+++ SAT+D ++ S++F+ P L + G
Sbjct: 144 DEAHERTIHTDVLFGVVKAAQKKRKELGKLPLKVIVMSATMDVDQFSQYFNGAPVLYLEG 203
Query: 180 KLYPVEILHSKERPTSYLESALKTAIDIHVREPEG-DVLIFMTGQDDIEKLVSKLEDKIR 238
+ +P+++ ++K+ + YL++AL + IH P D+L+F+TGQ++IE + D +
Sbjct: 204 RQHPIQVFYTKQPQSDYLQAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMTKTCRDIAK 263
Query: 239 SLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDC 298
L +G C ++PL+ SLP Q+RVF P CR+ I+STNIAETS+T+ G+ YV+D
Sbjct: 264 HLPDG-CPQMTVMPLYASLPYSQQLRVFQAAPKGCRKVILSTNIAETSITISGIKYVVDT 322
Query: 299 GYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTV 358
G VK ++YNP G+ L V ++SK QA QR GRAGR G CYRLY + ++F +TV
Sbjct: 323 GMVKAKKYNPEIGLEVLAVQRVSKAQAWQRTGRAGREDSGICYRLYTEDEF-EKFDKMTV 381
Query: 359 PEIQ---RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGS 415
PEIQ R +LA +L L +L + N+L FDF+ PS ++++ A++QL L+ A+++
Sbjct: 382 PEIQSLCRCNLASVLLQLLALRIP--NILTFDFMSKPSPDAIQAAIEQLDLLGAVEQKED 439
Query: 416 ---ITSIGRTMA 424
+T +GR MA
Sbjct: 440 QLVLTPLGRKMA 451
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 864 (309.2 bits), Expect = 2.0e-86, P = 2.0e-86
Identities = 188/436 (43%), Positives = 270/436 (61%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPXXXXX 62
LP+ + I +GETG GKSTQ+ Q L G+T G ++GVTQP
Sbjct: 54 LPVFKLRNHILYLVESYQTLVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAA 113
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTS-ERTLIKYLTDGVLLREILSNPDLSPYSVI 121
E G LG EVGY IRF+D T + T IK+LTDG+L+RE++++P L+ YSV+
Sbjct: 114 VSVAGRVADERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMADPLLTRYSVL 173
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPT------- 174
+LDEAHER+L TDI +GL+K++ R L++++ SATLD EK FF+ T
Sbjct: 174 MLDEAHERTLYTDIAIGLLKKIQKKRGD-LRLIVASATLDAEKFRDFFNQNDTGDPSKDT 232
Query: 175 ---LNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVS 231
L V G+ +PV+I + + Y++S ++TA+ IH E +GD+L F+TGQ+++E +VS
Sbjct: 233 SVILTVEGRTFPVDIFYIQSPVPDYIKSTVETAMKIHQMENDGDILAFLTGQEEVETVVS 292
Query: 232 KLEDKIRSLDE-GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVD 290
L ++ R+L G +LP++ LP Q++VF + R+ IV+TN+AETS+T+
Sbjct: 293 MLIEQARALSRTGMRKHLRVLPMYAGLPSPDQMKVFERVSRSVRKVIVATNVAETSITIH 352
Query: 291 GVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYH 350
G+ YVIDCG+VK R YNP + + L VV +SK ANQR GRAGR R GKCYRLY +T
Sbjct: 353 GIAYVIDCGFVKLRAYNPKTAIECLVVVPVSKASANQRAGRAGRNRSGKCYRLYTATEED 412
Query: 351 DEFL-DVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDA 409
E L TVPE+QRS+LA +L LK+L + NVL+F FL PP ++S+ AL+ LY +
Sbjct: 413 FEKLPQSTVPEMQRSNLAPVILQLKALGID--NVLRFPFLSPPPAQSMVQALELLYALGG 470
Query: 410 IDENGSITS-IGRTMA 424
+D + +T +G +A
Sbjct: 471 LDMHCRLTEPLGMRIA 486
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 864 (309.2 bits), Expect = 2.0e-86, P = 2.0e-86
Identities = 185/435 (42%), Positives = 271/435 (62%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPXXXXX 62
LP+ + I IGETG GKSTQ+ Q L G+T G ++GVTQP
Sbjct: 54 LPVFKLRNHILYLIENYQTVVIIGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAA 113
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSE-RTLIKYLTDGVLLREILSNPDLSPYSVI 121
+E G LG EVGY IRF+D T+ T IK+LTDG+L+RE++ +P L+ YS I
Sbjct: 114 VTVAGRVAEERGAVLGHEVGYCIRFDDCTNPLATRIKFLTDGMLVREMMVDPLLTKYSAI 173
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSN---------- 171
+LDEAHER+L TDI +GL+K++ R L++++ SATLD EK FF++
Sbjct: 174 MLDEAHERTLYTDIAIGLLKKIQKKRGD-LRLIVASATLDAEKFRDFFNHNDTSDPTRDT 232
Query: 172 CPTLNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVS 231
C L V G+ +PV+I + + Y++S ++T + IH E +GD+L F+TGQ+++E +VS
Sbjct: 233 CVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVS 292
Query: 232 KLEDKIRSLDE-GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVD 290
L ++ R+L + G ILP++ LP Q++VF + R+ IV+TN+AETS+T+
Sbjct: 293 MLIEQARALGQTGMKRHLRILPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITIS 352
Query: 291 GVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYH 350
G+VYVIDCG+VK R YNP + + L VV +S+ ANQR GR GR+R GKCYRLY +
Sbjct: 353 GIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAF- 411
Query: 351 DEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI 410
D+ TVPE+QRS+LA +L LK+L + NVL+F F+ PP ++S+ AL+ LY + +
Sbjct: 412 DQLPQSTVPEMQRSNLAPVILQLKALGID--NVLRFHFMSPPPAQSMVQALELLYALGGL 469
Query: 411 DENGSITS-IGRTMA 424
D++ +T +G +A
Sbjct: 470 DKDCRLTEPLGMRIA 484
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 184/435 (42%), Positives = 270/435 (62%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPXXXXX 62
LP+ + I +GETG GKSTQ+ Q L G+T G ++GVTQP
Sbjct: 54 LPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAA 113
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSE-RTLIKYLTDGVLLREILSNPDLSPYSVI 121
+E G LG EVGY IRF+D T + T IK+LTDG+L+RE++ +P L+ YSVI
Sbjct: 114 VTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVI 173
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSN---------- 171
+LDEAHER+L TDI +GL+K++ R L++++ SATLD +K FF+
Sbjct: 174 MLDEAHERTLYTDIAIGLLKKIQKKRGD-LRLIVASATLDADKFRDFFNQNETSDPARDT 232
Query: 172 CPTLNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVS 231
C L V G+ +PV+I + + Y++S ++T + IH E +GDVL F+TGQ+++E +VS
Sbjct: 233 CVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVS 292
Query: 232 KLEDKIRSLDE-GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVD 290
L ++ R+L G +LP++ LP Q++VF + R+ IV+TN+AETS+T+
Sbjct: 293 MLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITIS 352
Query: 291 GVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYH 350
G+VYVIDCG+VK R YNP + + L VV +S+ ANQR GR GR+R GKCYRLY +
Sbjct: 353 GIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAF- 411
Query: 351 DEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI 410
D+ TVPE+QRS+LA +L LK+L + NVL+F F+ PP ++S+ AL+ LY + +
Sbjct: 412 DKLPQSTVPEMQRSNLAPVILQLKALGID--NVLRFHFMSPPPAQSMVQALELLYALGGL 469
Query: 411 DENGSITS-IGRTMA 424
D++ +T +G +A
Sbjct: 470 DKDCRLTEPLGMRIA 484
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 184/435 (42%), Positives = 270/435 (62%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPXXXXX 62
LP+ + I +GETG GKSTQ+ Q L G+T G ++GVTQP
Sbjct: 54 LPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAA 113
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSE-RTLIKYLTDGVLLREILSNPDLSPYSVI 121
+E G LG EVGY IRF+D T + T IK+LTDG+L+RE++ +P L+ YSVI
Sbjct: 114 VTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVI 173
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSN---------- 171
+LDEAHER+L TDI +GL+K++ R L++++ SATLD +K FF+
Sbjct: 174 MLDEAHERTLYTDIAIGLLKKIQKKRGD-LRLIVASATLDADKFRDFFNQNETSDPARDT 232
Query: 172 CPTLNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVS 231
C L V G+ +PV+I + + Y++S ++T + IH E +GDVL F+TGQ+++E +VS
Sbjct: 233 CVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVS 292
Query: 232 KLEDKIRSLDE-GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVD 290
L ++ R+L G +LP++ LP Q++VF + R+ IV+TN+AETS+T+
Sbjct: 293 MLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITIS 352
Query: 291 GVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYH 350
G+VYVIDCG+VK R YNP + + L VV +S+ ANQR GR GR+R GKCYRLY +
Sbjct: 353 GIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAF- 411
Query: 351 DEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI 410
D+ TVPE+QRS+LA +L LK+L + NVL+F F+ PP ++S+ AL+ LY + +
Sbjct: 412 DKLPQSTVPEMQRSNLAPVILQLKALGID--NVLRFHFMSPPPAQSMVQALELLYALGGL 469
Query: 411 DENGSITS-IGRTMA 424
D++ +T +G +A
Sbjct: 470 DKDCRLTEPLGMRIA 484
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 506 (183.2 bits), Expect = 3.2e-86, Sum P(2) = 3.2e-86
Identities = 104/245 (42%), Positives = 151/245 (61%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
+LPI + + + +GETGSGK+TQ+ Q L+ GY ++GII TQP
Sbjct: 478 SLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGYHRNGIICCTQPRRVAA 537
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
E+ V +G VGY IRFED T++ T I+Y+TDG+LLRE L++ +L YSVII
Sbjct: 538 VSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLNDKELDKYSVII 597
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
+DEAHERS+NTD+LLG++K + L+ + LK+++TSAT+D +K S FF N P N+ G+ +
Sbjct: 598 MDEAHERSINTDVLLGILKNIC-LKRNDLKLIVTSATIDAKKFSAFFGNAPIYNIQGRTF 656
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPE-----GDVLIFMTGQDDIEKLVSKLEDKI 237
V I + + Y+E A++ AI IHV + GD+LIFMTGQ+DI L ++
Sbjct: 657 KVHIEYLRTPCNDYIECAVQKAIQIHVSDNNYDNNFGDILIFMTGQEDINATCYLLSERF 716
Query: 238 RSLDE 242
+ E
Sbjct: 717 YEVYE 721
Score = 397 (144.8 bits), Expect = 3.2e-86, Sum P(2) = 3.2e-86
Identities = 84/174 (48%), Positives = 114/174 (65%)
Query: 250 ILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPS 309
I P++ L E Q ++F + R+ IVSTNIAETSLT+DG+ YVID GY K + YN +
Sbjct: 774 IFPIYSQLSSEQQSKIFKKY--DLRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQT 831
Query: 310 SGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGS 369
GM L V IS+ ANQR GRAGRT G CYRLY + + +PEIQRS+L+
Sbjct: 832 IGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNV 891
Query: 370 VLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTM 423
VL LKSL + N+ +FDF+D PS ES+ ++L +L+++ AI+ G++T IGR M
Sbjct: 892 VLLLKSLHVQ--NLFEFDFIDVPSKESIINSLHELWVLGAINNEGNLTDIGRKM 943
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 506 (183.2 bits), Expect = 3.2e-86, Sum P(2) = 3.2e-86
Identities = 104/245 (42%), Positives = 151/245 (61%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
+LPI + + + +GETGSGK+TQ+ Q L+ GY ++GII TQP
Sbjct: 478 SLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGYHRNGIICCTQPRRVAA 537
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
E+ V +G VGY IRFED T++ T I+Y+TDG+LLRE L++ +L YSVII
Sbjct: 538 VSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLNDKELDKYSVII 597
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
+DEAHERS+NTD+LLG++K + L+ + LK+++TSAT+D +K S FF N P N+ G+ +
Sbjct: 598 MDEAHERSINTDVLLGILKNIC-LKRNDLKLIVTSATIDAKKFSAFFGNAPIYNIQGRTF 656
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPE-----GDVLIFMTGQDDIEKLVSKLEDKI 237
V I + + Y+E A++ AI IHV + GD+LIFMTGQ+DI L ++
Sbjct: 657 KVHIEYLRTPCNDYIECAVQKAIQIHVSDNNYDNNFGDILIFMTGQEDINATCYLLSERF 716
Query: 238 RSLDE 242
+ E
Sbjct: 717 YEVYE 721
Score = 397 (144.8 bits), Expect = 3.2e-86, Sum P(2) = 3.2e-86
Identities = 84/174 (48%), Positives = 114/174 (65%)
Query: 250 ILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPS 309
I P++ L E Q ++F + R+ IVSTNIAETSLT+DG+ YVID GY K + YN +
Sbjct: 774 IFPIYSQLSSEQQSKIFKKY--DLRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQT 831
Query: 310 SGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGS 369
GM L V IS+ ANQR GRAGRT G CYRLY + + +PEIQRS+L+
Sbjct: 832 IGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNV 891
Query: 370 VLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTM 423
VL LKSL + N+ +FDF+D PS ES+ ++L +L+++ AI+ G++T IGR M
Sbjct: 892 VLLLKSLHVQ--NLFEFDFIDVPSKESIINSLHELWVLGAINNEGNLTDIGRKM 943
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 862 (308.5 bits), Expect = 3.3e-86, P = 3.3e-86
Identities = 184/435 (42%), Positives = 269/435 (61%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPXXXXX 62
LP+ + I +GETG GKSTQ+ Q L G+T G ++GVTQP
Sbjct: 54 LPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAA 113
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSE-RTLIKYLTDGVLLREILSNPDLSPYSVI 121
+E G LG EVGY IRF+D T T IK+LTDG+L+RE++ +P L+ YS I
Sbjct: 114 VTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSAI 173
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSN---------- 171
+LDEAHER+L TDI +GL+K++ R L++++ SATLD EK FF+
Sbjct: 174 MLDEAHERTLYTDIAIGLLKKIQKKRGD-LRLIVASATLDAEKFRDFFNQNDTSDPPRDT 232
Query: 172 CPTLNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVS 231
C L V G+ +PV+I + + Y++S ++T + IH E +GD+L F+TGQ+++E +VS
Sbjct: 233 CVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVS 292
Query: 232 KLEDKIRSLDE-GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVD 290
L ++ R+L G +LP++ LP Q++VF + R+ IV+TN+AETS+T+
Sbjct: 293 MLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITIS 352
Query: 291 GVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYH 350
G+VYVIDCG+VK R YNP + + L VV +S+ ANQR GRAGR+R GKCYRLY +
Sbjct: 353 GIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRAGRSRSGKCYRLYTEDAF- 411
Query: 351 DEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI 410
D+ TVPE+QRS+LA +L LK+L + NVL+F F+ PP ++S+ AL+ LY + +
Sbjct: 412 DQLPQSTVPEMQRSNLAPVILQLKALGID--NVLRFHFMSPPPAQSMVQALELLYALGGL 469
Query: 411 DENGSITS-IGRTMA 424
D++ +T +G +A
Sbjct: 470 DKDCRLTEPLGMRIA 484
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
Identities = 184/435 (42%), Positives = 268/435 (61%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPXXXXX 62
LP+ + I +GETG GKSTQ+ Q L G+T G ++GVTQP
Sbjct: 46 LPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAA 105
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSE-RTLIKYLTDGVLLREILSNPDLSPYSVI 121
+E G LG EVGY IRF+D T T IK+LTDG+L+RE++ +P L+ YS I
Sbjct: 106 VTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSAI 165
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSN---------- 171
+LDEAHER+L TDI +GL+K++ R L++L+ SATLD EK FF+
Sbjct: 166 MLDEAHERTLYTDIAIGLLKKIQRKRGD-LRLLVASATLDAEKFRDFFNQNETSDPTRDT 224
Query: 172 CPTLNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVS 231
C L V G+ +PV+I + + Y++S ++T + IH E +GD+L F+TGQ+++E +VS
Sbjct: 225 CVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVS 284
Query: 232 KLEDKIRSLDE-GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVD 290
L ++ R+L G +LP++ LP Q++VF + R+ IV+TN+AETS+T+
Sbjct: 285 MLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITIS 344
Query: 291 GVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYH 350
G+VYVIDCG+VK R YNP + + L V +S+ ANQR GRAGR+R GKCYRLY +
Sbjct: 345 GIVYVIDCGFVKLRAYNPRTTIECLVVAPVSQASANQRAGRAGRSRSGKCYRLYTEEAF- 403
Query: 351 DEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI 410
D+ TVPE+QRS+LA +L LK+L + NVL+F F+ PP ++S+ AL+ LY + +
Sbjct: 404 DKLPQCTVPEMQRSNLAPVILQLKALGID--NVLRFHFMSPPPAQSMVQALELLYALGGL 461
Query: 411 DENGSITS-IGRTMA 424
D++ +T +G +A
Sbjct: 462 DKDCRLTEPLGMRVA 476
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
Identities = 184/435 (42%), Positives = 268/435 (61%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPXXXXX 62
LP+ + I +GETG GKSTQ+ Q L G+T G ++GVTQP
Sbjct: 54 LPVFKLRNHILYLVENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAA 113
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSE-RTLIKYLTDGVLLREILSNPDLSPYSVI 121
+E G LG EVGY IRF+D T T IK+LTDG+L+RE++ +P L+ YS I
Sbjct: 114 VTVAGRVAEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSAI 173
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSN---------- 171
+LDEAHER+L TDI +GL+K++ R L++L+ SATLD EK FF+
Sbjct: 174 MLDEAHERTLYTDIAIGLLKKIQRKRGD-LRLLVASATLDAEKFRDFFNQNETSDPTRDT 232
Query: 172 CPTLNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVS 231
C L V G+ +PV+I + + Y++S ++T + IH E +GD+L F+TGQ+++E +VS
Sbjct: 233 CVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVS 292
Query: 232 KLEDKIRSLDE-GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVD 290
L ++ R+L G +LP++ LP Q++VF + R+ IV+TN+AETS+T+
Sbjct: 293 MLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITIS 352
Query: 291 GVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYH 350
G+VYVIDCG+VK R YNP + + L V +S+ ANQR GRAGR+R GKCYRLY +
Sbjct: 353 GIVYVIDCGFVKLRAYNPRTTIECLVVAPVSQASANQRAGRAGRSRSGKCYRLYTEEAF- 411
Query: 351 DEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI 410
D+ TVPE+QRS+LA +L LK+L + NVL+F F+ PP ++S+ AL+ LY + +
Sbjct: 412 DKLPQCTVPEMQRSNLAPVILQLKALGID--NVLRFHFMSPPPAQSMVQALELLYALGGL 469
Query: 411 DENGSITS-IGRTMA 424
D++ +T +G +A
Sbjct: 470 DKDCRLTEPLGMRVA 484
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
Identities = 183/430 (42%), Positives = 265/430 (61%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
+LPI Q + IGETGSGK+TQ+ Q L+ G ++ GII VTQP
Sbjct: 73 SLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVTQPRRVAA 132
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
E LG+ VGY +RF+D TSE T IK+LTDG+LLRE +S+ L YS +I
Sbjct: 133 ISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLRKYSCVI 192
Query: 123 LDEAHERSLNTDILLGLVK----RLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVP 178
LDEAHER+++TD+L G+VK R L LK+++ SAT+D + S++F+ P L +
Sbjct: 193 LDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPVLYLE 252
Query: 179 GKLYPVEILHSKERPTSYLESALKTAIDIHVREPEG-DVLIFMTGQDDIEKLVSKLEDKI 237
G+ +P+++ ++K+ YL +AL + IH P D+L+F+TGQ++IE + D
Sbjct: 253 GRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMSKTCRDIA 312
Query: 238 RSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVID 297
+ L +G C ++LPL+ SLP Q+RVF P R+ I+STNIAETS+T+ G+ YV+D
Sbjct: 313 KHLPDG-CPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVD 371
Query: 298 CGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVT 357
G VK ++YNP SG+ L V ++SK QA QR GRAGR G CYRLY + ++F +T
Sbjct: 372 TGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEF-EKFDKMT 430
Query: 358 VPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI---DENG 414
VPEIQR +LA +L L ++ + NVL FDF+ PS + ++ A+ QL L+ A+ D+
Sbjct: 431 VPEIQRCNLASVMLQLLAMKVP--NVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDDQL 488
Query: 415 SITSIGRTMA 424
++T +GR MA
Sbjct: 489 TLTPMGRKMA 498
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 857 (306.7 bits), Expect = 1.1e-85, P = 1.1e-85
Identities = 186/430 (43%), Positives = 264/430 (61%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
NLPI Q + IGETGSGK+TQ+ Q L+ G + II VTQP
Sbjct: 80 NLPIFQARGQLLAQLRNLDSAVLIGETGSGKTTQIPQYLYEGGIGRQAIIAVTQPRRVAA 139
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
E LG+ VGY +RF+D TS+ T IK+LTDG+LLRE +S+ L YS II
Sbjct: 140 ISLATRVSDEKRTELGKLVGYTVRFDDVTSDDTKIKFLTDGMLLREAISDCLLRKYSCII 199
Query: 123 LDEAHERSLNTDILLGLVK----RLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVP 178
LDEAHER+L+TD+L G+VK R L LK+L+ SAT+D + S++F+ P L +
Sbjct: 200 LDEAHERTLHTDVLFGVVKAAQKRRKELGKLPLKVLVMSATMDVDLFSQYFNGAPVLYLE 259
Query: 179 GKLYPVEILHSKERPTSYLESALKTAIDIHVREPEG-DVLIFMTGQDDIEKLVSKLEDKI 237
G+ +P++I ++K+ YL +AL + IH P D+L+F+TGQ++IE + D
Sbjct: 260 GRQHPIQIFYTKQPQHDYLHAALVSVFQIHQEAPSSHDILVFLTGQEEIEAMSKTCRDIA 319
Query: 238 RSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVID 297
+ L +G C ++LPL+ SLP Q+RVF P R+ I+STNIAETS+T+ G+ YV+D
Sbjct: 320 KHLPDG-CPSMLVLPLYASLPYAQQLRVFQRAPKGYRKVIISTNIAETSITITGIKYVVD 378
Query: 298 CGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVT 357
G VK ++YNP SG+ L V ++SK QA QR GRAGR G CYRLY + ++F +T
Sbjct: 379 TGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEF-EKFEKMT 437
Query: 358 VPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDE-NG-- 414
VPEIQR +LA +L L ++ + NVL FDF+ PS + ++ A+ QL L+ A++ +G
Sbjct: 438 VPEIQRCNLASVMLQLLAMKIP--NVLTFDFMSKPSPDHIQAAIAQLELLGALEHRDGQL 495
Query: 415 SITSIGRTMA 424
++T +GR MA
Sbjct: 496 TLTPMGRKMA 505
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 572 (206.4 bits), Expect = 2.4e-85, Sum P(2) = 2.4e-85
Identities = 117/263 (44%), Positives = 169/263 (64%)
Query: 175 LNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLE 234
L++ G+ YPV+I + +E ++Y+++ ++T IDIH +P GD+L+F+TGQ++IEKL+ L+
Sbjct: 248 LSIEGRTYPVDIHYLEESTSNYIQTTIQTIIDIHTTQPPGDILVFLTGQEEIEKLIQTLD 307
Query: 235 DKIRSL----------DEGSCMDAVILPLHGSLPPEMQVRVFSP--PPPNCRRFIVSTNI 282
DK L + M +LP++ L Q++VF R+ I+STNI
Sbjct: 308 DKFEILRQYHQQHHHQQQQPFMKYSLLPMYSGLSINKQIKVFESVGDSKKIRKIIISTNI 367
Query: 283 AETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYR 342
AETS+T+DGVVYV+DCG+VK + Y+ SG+ SL +V SK ANQR GRAGR+R GKCYR
Sbjct: 368 AETSITIDGVVYVVDCGFVKIKSYDSESGLESLVIVPTSKSSANQRAGRAGRSRAGKCYR 427
Query: 343 LYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALK 402
LY Y D T+PEIQRS+L ++L LK+L + N+L FDF+ P S SL L+
Sbjct: 428 LYTELTYEKLLPDQTIPEIQRSNLTNTILQLKALGID--NILNFDFISQPPSSSLIRGLE 485
Query: 403 QLYLIDAIDENGSITS-IGRTMA 424
LY + A+D+NG +T+ G MA
Sbjct: 486 VLYGLGALDDNGKLTNPTGMIMA 508
Score = 301 (111.0 bits), Expect = 2.4e-85, Sum P(2) = 2.4e-85
Identities = 78/222 (35%), Positives = 118/222 (53%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKS-GIIGVTQPXXXX 61
+LPI Q + I IG TG GKSTQ+ Q L G++ I TQP
Sbjct: 54 SLPIYQNRKHILYLLEKYSTLVIIGNTGCGKSTQIPQYLFESGWSDGFRTILCTQPRRVA 113
Query: 62 XXXXXXXXXQELGVR-LGEEVGYAIRFEDRTSE-RTLIKYLTDGVLLREILSNPDLSPYS 119
QE+G + +G+ VGY++RF+++ S+ T IKY+TDG+L+RE++ +P L YS
Sbjct: 114 AISLAERVAQEMGEQHVGKTVGYSVRFDEKISDIETRIKYVTDGMLIREMMLDPLLLKYS 173
Query: 120 VIILDEAHERSLNTDILLGLVKRLVNLRAS---------KLKILITSATLDGEKVSKFFS 170
VI++DEAHERSL TD+L+GL+K++ R S LK++I+SATL+ FF+
Sbjct: 174 VIMIDEAHERSLQTDLLMGLLKKVQKKRNSTNNNNNNDNSLKLIISSATLNANDFFNFFN 233
Query: 171 NCPTLNVPGKLYPVEILHSKERPTS--YLESALKTAIDIHVR 210
T + + + + P YLE + I ++
Sbjct: 234 YNQTNDKSKDTSTILSIEGRTYPVDIHYLEESTSNYIQTTIQ 275
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 852 (305.0 bits), Expect = 3.8e-85, P = 3.8e-85
Identities = 185/441 (41%), Positives = 270/441 (61%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPXXXXX 62
LPI + I +GETG GKSTQ+ Q L G+ G I +TQP
Sbjct: 77 LPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQIVITQPRRVAV 136
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E LG +VGY +RF+D + + T +K++TDG+LLREIL++P LS YS+I+
Sbjct: 137 VTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILADPLLSKYSIIM 196
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPT-------- 174
+DEAHERS NTDILLGL+++++ +R + L+I+++SATLD E FF T
Sbjct: 197 IDEAHERSCNTDILLGLLRKIIQIR-NDLRIIVSSATLDAELFKDFFEMNETGNSDKDTA 255
Query: 175 --LNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSK 232
++V G+ +PV + H+K Y +SA+ T I+IH E GD+L+F+TGQD++E + K
Sbjct: 256 GIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKHENPGDILVFLTGQDEVEDVCEK 315
Query: 233 LEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGV 292
L + +L +C ++P +G+LP Q++ F P R+ +V+TNIAE S+T+ G+
Sbjct: 316 LRELAGNLK--NCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIAEASITIPGI 373
Query: 293 VYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDE 352
YVID GYVK R + ++G+ +L V +SK A QR GRAGR RPGKCYRLYP + + +
Sbjct: 374 CYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRLYPESEF-ER 432
Query: 353 FLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDE 412
F + TVPEIQR +A ++L LK+L + NV +F +L PP S ++ + L+ LY + AIDE
Sbjct: 433 FAEGTVPEIQRCQMASTILQLKALGVQ--NVHRFHYLSPPPSWAMINGLELLYALGAIDE 490
Query: 413 NGSITS-IGRTMAGTSFFALP 432
+TS +G MA F LP
Sbjct: 491 TSQLTSPLGLQMAE---FPLP 508
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 849 (303.9 bits), Expect = 8.0e-85, P = 8.0e-85
Identities = 179/406 (44%), Positives = 257/406 (63%)
Query: 27 GETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIR 86
GETGSGK+TQL Q L+ G + G+I VTQP E LG+ VGY +R
Sbjct: 6 GETGSGKTTQLPQYLYEGGIGRQGVIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVR 65
Query: 87 FEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVK----R 142
F+D +SE T IK+LTDG+LLRE +S+ L YS IILDEAHER+++TD+L G+VK R
Sbjct: 66 FDDVSSEDTRIKFLTDGMLLREAISDSLLRKYSCIILDEAHERTVHTDVLFGVVKAAQRR 125
Query: 143 LVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERPTSYLESALK 202
LR LK+++ SAT+D + S++F+ L + G+ +P+++ ++K+ YL +AL
Sbjct: 126 RKELRKLPLKVIVMSATMDVDLFSQYFNGASVLYLEGRQHPIQVFYTKQPQQDYLHAALV 185
Query: 203 TAIDIHVREPEG-DVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEM 261
+ IH P D+L+F+TGQ++IE + D + L +G C ++LPL+ SLP
Sbjct: 186 SVFQIHQEAPSSQDILVFLTGQEEIEAVSKTCRDIAKHLPDG-CPSMLVLPLYASLPYAQ 244
Query: 262 QVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQIS 321
Q+RVF P CR+ I++TNIAETS+T+ G+ YV+D G VK ++YNP SG+ L V ++S
Sbjct: 245 QLRVFQGAPKGCRKVIIATNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVS 304
Query: 322 KVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDI 381
K QA QR GRAGR G CYRLY + ++F +TVPEIQR +LA +L L ++ +
Sbjct: 305 KTQAWQRAGRAGREDSGICYRLYTENEF-EKFEKMTVPEIQRCNLASVLLQLLAMKVP-- 361
Query: 382 NVLKFDFLDPPSSESLEDALKQLYLIDAI---DENGSITSIGRTMA 424
NVL FDF+ PS + ++ A+ QL L+ A+ D ++T IGR MA
Sbjct: 362 NVLTFDFMSKPSPDHMQAAVAQLDLLGALERKDNQLTLTPIGRKMA 407
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 842 (301.5 bits), Expect = 4.4e-84, P = 4.4e-84
Identities = 180/435 (41%), Positives = 266/435 (61%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPXXXXX 62
LP+ + I +GETG GKSTQ+ Q L G+T G ++GVTQP
Sbjct: 54 LPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEGRVVGVTQPRRVAA 113
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSE-RTLIKYLTDGVLLREILSNPDLSPYSVI 121
E G LG EVGY IRF+D T T IK+LTDG+L+RE++ +P L+ YSV+
Sbjct: 114 VTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSVV 173
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSN---------- 171
+LDEAHER+L TDI +GL+K++ R L++++ SATLD EK FF+
Sbjct: 174 MLDEAHERTLYTDIAIGLLKKIQKKRGD-LRLIVASATLDAEKFRDFFNQNETSDPARDT 232
Query: 172 CPTLNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVS 231
C L V G+ +PV+I + + Y+++ + T + IH E +GD+L F+TGQ+++E +VS
Sbjct: 233 CVILTVEGRTFPVDIFYLQSPVPDYIKATVDTVVKIHQTEGDGDILAFLTGQEEVETVVS 292
Query: 232 KLEDKIRSLDE-GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVD 290
L ++ R+L G +LP++ LP Q++VF + R+ IV+TN+AETS+T+
Sbjct: 293 MLIEQARALARTGMKKHLRVLPMYAGLPSFEQMKVFERVSHSVRKVIVATNVAETSITIS 352
Query: 291 GVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYH 350
G+VYVIDCG++K R YNP + + L VV +S+ ANQR GR GR R GKCYRLY +
Sbjct: 353 GIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAF- 411
Query: 351 DEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI 410
++ TVPE+QRS+LA VL LK+L + +VL+F F+ PP ++S+ AL+ LY + +
Sbjct: 412 EQLPQSTVPEMQRSNLAPVVLQLKALGID--SVLRFHFMSPPPAQSMVQALELLYALGGL 469
Query: 411 DENGSITS-IGRTMA 424
D++ +T +G +A
Sbjct: 470 DKDCRLTEPLGMRIA 484
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 842 (301.5 bits), Expect = 4.4e-84, P = 4.4e-84
Identities = 180/435 (41%), Positives = 266/435 (61%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPXXXXX 62
LP+ + I +GETG GKSTQ+ Q L G+T G ++GVTQP
Sbjct: 54 LPVFKLRNHILYLVENYQTVVIVGETGCGKSTQVPQYLAEAGWTAEGRVVGVTQPRRVAA 113
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSE-RTLIKYLTDGVLLREILSNPDLSPYSVI 121
E G LG EVGY IRF+D T T IK+LTDG+L+RE++ +P L+ YSV+
Sbjct: 114 VTVAGRVADERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSVV 173
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSN---------- 171
+LDEAHER+L TDI +GL+K++ R L++++ SATLD EK FF+
Sbjct: 174 MLDEAHERTLYTDIAIGLLKKIQKKRGD-LRLIVASATLDAEKFRDFFNQNETSDPARDT 232
Query: 172 CPTLNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVS 231
C L V G+ +PV+I + + Y+++ + T + IH E +GD+L F+TGQ+++E +VS
Sbjct: 233 CVILTVEGRTFPVDIFYLQSPVPDYIKATVDTVVKIHQTEGDGDILAFLTGQEEVETVVS 292
Query: 232 KLEDKIRSLDE-GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVD 290
L ++ R+L G +LP++ LP Q++VF + R+ IV+TN+AETS+T+
Sbjct: 293 MLIEQARALARTGMKKHLRVLPMYAGLPSFEQMKVFERVSHSVRKVIVATNVAETSITIS 352
Query: 291 GVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYH 350
G+VYVIDCG++K R YNP + + L VV +S+ ANQR GR GR R GKCYRLY +
Sbjct: 353 GIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAF- 411
Query: 351 DEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI 410
++ TVPE+QRS+LA VL LK+L + +VL+F F+ PP ++S+ AL+ LY + +
Sbjct: 412 EQLPQSTVPEMQRSNLAPVVLQLKALGID--SVLRFHFMSPPPAQSMVQALELLYALGGL 469
Query: 411 DENGSITS-IGRTMA 424
D++ +T +G +A
Sbjct: 470 DKDCRLTEPLGMRIA 484
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 457 (165.9 bits), Expect = 1.1e-83, Sum P(2) = 1.1e-83
Identities = 102/261 (39%), Positives = 155/261 (59%)
Query: 51 IIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREIL 110
+IGVTQP +E+ LG +VGY +RF+D +S+ T IKY+TDG LL+ IL
Sbjct: 1 MIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHIL 60
Query: 111 SNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNL----RASKLKILITSATLDGEKVS 166
+P+L+ +SVIILDEAHER+L TDIL GL+K+L R LK+++ SAT++ K+S
Sbjct: 61 GDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLS 120
Query: 167 KFFSNCPTLNVPGKLYPVE-----ILHSKERP-TSYLESALKTAIDIHVREPEGDVLIFM 220
FF NCP ++PG+LYPV ++ ++R T+Y+++ +K +DIH+ E GD+L+F+
Sbjct: 121 AFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFL 180
Query: 221 TGQDDIEKLVSKLEDKIRSLD-----EGSCMDAV-ILPLHGSLPPEMQVRVFSPPPPNCR 274
TGQ +IEK L S+D + + +D + ILP +GS+ Q +
Sbjct: 181 TGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTVSQTSLTFVTHIQIM 240
Query: 275 RFIVSTNIAETSLTVDGVVYV 295
+ I + T LT+ G+ V
Sbjct: 241 KQISENQHSLTGLTIAGITGV 261
Score = 410 (149.4 bits), Expect = 1.1e-83, Sum P(2) = 1.1e-83
Identities = 84/171 (49%), Positives = 115/171 (67%)
Query: 262 QVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQIS 321
Q R+F PPPP R+ ++STNI+ TSLT+DG+ YV+D G+VKQ +NP G+ L+VV IS
Sbjct: 279 QRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPIS 338
Query: 322 KVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDI 381
K +A QR GRAGRT GKC+R+Y ++ D +PEI+R+SL VL LK L + D
Sbjct: 339 KSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHD- 397
Query: 382 NVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMAGTSFFALP 432
V++F +LDPP+ + +ALKQLY DAID +G +T +G +M F LP
Sbjct: 398 -VIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVE---FPLP 444
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 821 (294.1 bits), Expect = 7.4e-82, P = 7.4e-82
Identities = 181/428 (42%), Positives = 248/428 (57%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
+LP+ I + ETGSGK+TQ+ Q L GY K+G+IG+TQP
Sbjct: 67 SLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNGMIGITQPRRVAA 126
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
QEL +G+ VGY +RFED TS T I++LTDGVLLRE + + L YSVII
Sbjct: 127 ITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDRLLLKYSVII 186
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASK----LKILITSATLDGEKVSKFFSNCPTLNVP 178
LDEAHER++N D+L G+VK R + LK+++TSAT+D + +F NC + +
Sbjct: 187 LDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYF-NCKGMYLE 245
Query: 179 GKLYPVEILHSKERPTSYLESALKTAIDIHVREPEG-DVLIFMTGQDDIEKLVSKLEDKI 237
G+ YPV ++H+KE Y+ + L T IH P+ DVLIF+TGQ++IE L ++ ++
Sbjct: 246 GRTYPVRVMHTKEEHEDYIHTVLVTLFHIHRTTPKNHDVLIFLTGQEEIESLAQQIR-QL 304
Query: 238 RSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVID 297
+D D + L+ L Q+ F P P N R+ I++TNIAETS+T+ G+ VID
Sbjct: 305 AKIDTTGTTDLRVFTLYAQLSQGKQLECFVPTPANVRKVILATNIAETSITIPGIRCVID 364
Query: 298 CGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVT 357
CG+VK++ +N G+ L V+ISK QA QR GRAGR G CYR Y D F D T
Sbjct: 365 CGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDADGTCYRAYTKAEM-DSFADAT 423
Query: 358 VPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAID--ENGS 415
PEI R++ VL L +LD+ D N FDFLDPP + L A K L + AI ++
Sbjct: 424 QPEILRTNPTSMVLQLLALDI-DCN--NFDFLDPPLEDGLRSAYKSLDALGAIKTGDDSY 480
Query: 416 ITSIGRTM 423
IT +GR M
Sbjct: 481 ITPLGRQM 488
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 804 (288.1 bits), Expect = 4.7e-80, P = 4.7e-80
Identities = 170/394 (43%), Positives = 252/394 (63%)
Query: 45 GYTKSG-IIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSE-RTLIKYLTD 102
G+T G ++GVTQP +E G LG EVGY IRF+D T + T IK+LTD
Sbjct: 64 GWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTD 123
Query: 103 GVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDG 162
G+L+RE++ +P L+ YSVI+LDEAHER+L TDI +GL+K++ R L++++ SATLD
Sbjct: 124 GMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGD-LRLIVASATLDA 182
Query: 163 EKVSKFFSN----------CPTLNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREP 212
+K FF+ C L V G+ +PV+I + + Y++S ++T + IH E
Sbjct: 183 DKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEG 242
Query: 213 EGDVLIFMTGQDDIEKLVSKLEDKIRSLDE-GSCMDAVILPLHGSLPPEMQVRVFSPPPP 271
+GDVL F+TGQ+++E +VS L ++ R+L G +LP++ LP Q++VF
Sbjct: 243 DGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSR 302
Query: 272 NCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGR 331
+ R+ IV+TN+AETS+T+ G+VYVIDCG+VK R YNP + + L VV +S+ ANQR GR
Sbjct: 303 SVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGR 362
Query: 332 AGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDP 391
GR+R GKCYRLY + D+ TVPE+QRS+LA +L LK+L + NVL+F F+ P
Sbjct: 363 GGRSRSGKCYRLYTEEAF-DKLPQSTVPEMQRSNLAPVILQLKALGID--NVLRFHFMSP 419
Query: 392 PSSESLEDALKQLYLIDAIDENGSITS-IGRTMA 424
P ++S+ AL+ LY + +D++ +T +G +A
Sbjct: 420 PPAQSMVQALELLYALGGLDKDCRLTEPLGMRIA 453
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
Identities = 174/421 (41%), Positives = 258/421 (61%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGY-TKSGIIGVTQPXXXXX 62
LPI +Y + +G TG GK+TQ+ Q L+ G+ +++GIIG TQP
Sbjct: 25 LPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCTQPRRLVA 84
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
EL G GY+I+F+ SE+T IKY+TDG+LL EI +P L YS++I
Sbjct: 85 KSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDPLLERYSIVI 144
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSN---CPTLNVPG 179
LDE HER+L+TD+LLG++KR++ R + +++++SA++D K+S+FF C T+++ G
Sbjct: 145 LDEVHERTLSTDLLLGVLKRILEKR-NDFRLVLSSASVDANKLSQFFGQDKVC-TMSIEG 202
Query: 180 KLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRS 239
KL+PVE L ++ +Y++SA++T I+I+ P GD+L+F++G+ +IE + K+ED +
Sbjct: 203 KLFPVETLFLQKPTENYVDSAIETVININSTYPPGDILVFLSGRKEIEYCIKKIEDSLIH 262
Query: 240 LDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCG 299
E C V LPLH L + Q+RVF+ + R+ I STNIAETS+T+DG+VYV+D G
Sbjct: 263 ASE-DCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYVVDSG 321
Query: 300 YVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYH---DEFLDV 356
+ KQR YNP + L V ISK A QR GRAGRT GK +RLY Y +EF
Sbjct: 322 FNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTEKAYSLMKEEF--- 378
Query: 357 TVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSI 416
+I ++ VL+LK L L N+L+F F P + L AL+ LYL+ +DE+G++
Sbjct: 379 -EADILNCDMSPLVLFLKGLGLK--NILQFPFFVRPPTVHLMAALEDLYLLGVLDESGNL 435
Query: 417 T 417
T
Sbjct: 436 T 436
>UNIPROTKB|C9JR60 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
RefSeq:NP_001159773.1 UniGene:Hs.29403 GeneID:79665 KEGG:hsa:79665
CTD:79665 HGNC:HGNC:18018 ChiTaRS:DHX40 OrthoDB:EOG48PMJH
EMBL:AC091271 EMBL:AC004167 IPI:IPI00952676
ProteinModelPortal:C9JR60 STRING:C9JR60 Ensembl:ENST00000425628
ArrayExpress:C9JR60 Uniprot:C9JR60
Length = 702
Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
Identities = 163/354 (46%), Positives = 235/354 (66%)
Query: 95 TLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNL----RASK 150
T IKY+TDG LL+ IL +P+L+ +SVIILDEAHER+L TDIL GL+K+L R
Sbjct: 67 TAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEH 126
Query: 151 LKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVE-----ILHSKERP-TSYLESALKTA 204
LK+++ SAT++ K+S FF NCP ++PG+LYPV ++ ++R T+Y+++ +K
Sbjct: 127 LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVT 186
Query: 205 IDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLD-----EGSCMDAV-ILPLHGSLP 258
+DIH+ E GD+L+F+TGQ +IEK L S+D + + +D + ILP +GS+
Sbjct: 187 MDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMT 246
Query: 259 PEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVV 318
+ Q R+F PPPP R+ ++STNI+ TSLT+DG+ YV+D G+VKQ +NP G+ L+VV
Sbjct: 247 TDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVV 306
Query: 319 QISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDL 378
ISK +A QR GRAGRT GKC+R+Y ++ D +PEI+R+SL VL LK L +
Sbjct: 307 PISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAI 366
Query: 379 SDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMAGTSFFALP 432
D V++F +LDPP+ + +ALKQLY DAID +G +T +G +M F LP
Sbjct: 367 HD--VIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVE---FPLP 415
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
Identities = 147/309 (47%), Positives = 211/309 (68%)
Query: 116 SPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTL 175
S V+++DEAHER+L+TDIL GL+K + R +LK+L+ SAT+D + S FF + P
Sbjct: 31 SQLGVVMVDEAHERTLHTDILFGLIKDVARFRP-ELKVLVASATMDTARFSTFFDDAPVF 89
Query: 176 NVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLED 235
+PG+ +PV+I ++K YLE+ + + + IHV +P GD+L+F+TGQ++IE L+D
Sbjct: 90 RIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQD 149
Query: 236 KIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYV 295
+ R L + ++LP++ +LP +MQ R+F P PP R+ +V+TNIAETSLT++G++YV
Sbjct: 150 RCRRLGS-KIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYV 208
Query: 296 IDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLD 355
+D G+ KQ+ YNP +GM SL V SK ANQR GRAGR GKC+RLY + Y E +
Sbjct: 209 LDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEE 268
Query: 356 VTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGS 415
TVPEIQR+SL VL LKSL + D+ + FDFLDPP E+L AL+QLY + A++ G
Sbjct: 269 TTVPEIQRTSLGNVVLLLKSLGIHDL--MHFDFLDPPPYETLLLALEQLYALGALNHLGE 326
Query: 416 ITSIGRTMA 424
+T+ GR MA
Sbjct: 327 LTTSGRKMA 335
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 778 (278.9 bits), Expect = 2.7e-77, P = 2.7e-77
Identities = 147/309 (47%), Positives = 210/309 (67%)
Query: 116 SPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTL 175
S V+++DEAHER+L+TDIL GL+K + R +LK+L+ SAT+D + S FF P
Sbjct: 31 SQLGVVMVDEAHERTLHTDILFGLIKDVARFRP-ELKVLVASATMDTARFSTFFDGAPVF 89
Query: 176 NVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLED 235
+PG+ +PV+I ++K YLE+ + + + IHV +P GD+L+F+TGQ++IE L+D
Sbjct: 90 RIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQD 149
Query: 236 KIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYV 295
+ R L + ++LP++ +LP +MQ R+F P PP R+ +V+TNIAETSLT++G++YV
Sbjct: 150 RCRRLGS-KIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYV 208
Query: 296 IDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLD 355
+D G+ KQ+ YNP +GM SL V SK ANQR GRAGR GKC+RLY + Y E +
Sbjct: 209 LDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEE 268
Query: 356 VTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGS 415
TVPEIQR+SL VL LKSL + D+ + FDFLDPP E+L AL+QLY + A++ G
Sbjct: 269 TTVPEIQRTSLGNVVLLLKSLGIHDL--MHFDFLDPPPYETLLLALEQLYALGALNHLGE 326
Query: 416 ITSIGRTMA 424
+T+ GR MA
Sbjct: 327 LTTSGRKMA 335
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 413 (150.4 bits), Expect = 2.2e-76, Sum P(2) = 2.2e-76
Identities = 92/222 (41%), Positives = 131/222 (59%)
Query: 205 IDIHVREPEGDVLI-FMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQV 263
+D V+ + +L + G+++ E+ E+ I S E +LPL+ LP + Q+
Sbjct: 729 VDFSVQSGDAGILDDYEEGEENEEE-EEGFEESIDS-KESEVGPLYVLPLYSLLPTKQQM 786
Query: 264 RVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKV 323
+VF PPP R IV+TN+AETSLT+ G+ YV+DCG K+R+YN +G+ S +V +SK
Sbjct: 787 KVFEDPPPGSRICIVATNVAETSLTIPGIRYVVDCGRSKERKYNQENGVQSFEVDWVSKA 846
Query: 324 QANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINV 383
ANQR GRAGRT PG CYRLY S V+ D F +VPEI R VL +KS+ + I
Sbjct: 847 SANQRAGRAGRTGPGHCYRLYSSAVFEDFFPQFSVPEILRMPFESIVLSMKSMGIDQI-- 904
Query: 384 LKFDFLDPPSSESLEDALKQLYLIDAID-ENGSITSIGRTMA 424
F F PP SL+ A + L ++ A+D E IT +G+ M+
Sbjct: 905 ANFPFPTPPDRFSLKKAEELLVILGALDKEQKQITDLGKKMS 946
Score = 400 (145.9 bits), Expect = 2.2e-76, Sum P(2) = 2.2e-76
Identities = 104/260 (40%), Positives = 140/260 (53%)
Query: 2 ANLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTK------SGIIGVT 55
A LP+ E I GETGSGK+TQ+ Q L+ G+ G+IGVT
Sbjct: 441 ALLPVFAEEHRIMEAVYHHDCIILCGETGSGKTTQVPQFLYEAGFGNLLHDLYPGMIGVT 500
Query: 56 QPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSER-----TLIKYLTDGVLLREIL 110
QP ELG G VGY IRF+ T +K++TDGVLLRE++
Sbjct: 501 QPRRVAAVSMAERVGSELGDH-GHRVGYQIRFDTTIKNEGKENGTALKFMTDGVLLREMM 559
Query: 111 SNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRAS----------KLKILITSATL 160
++ L+ YS II+DEAHER++NTDIL+G++ R+V LR LK++I SATL
Sbjct: 560 TDFLLAKYSAIIIDEAHERNINTDILIGMLTRVVKLRRKYHKENPQLYKPLKLIIMSATL 619
Query: 161 ---D-GEKVSKFFSNCPTLNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDV 216
D E + F + P +NV + YPV I +K+ YLE A K IH + PEG +
Sbjct: 620 RVSDFSENPALFKTPPPIINVQARQYPVSIHFNKKTNYDYLEEAFKKTCKIHRKLPEGGI 679
Query: 217 LIFMTGQDDIEKLVSKLEDK 236
LIF+TGQ++I LV KL +
Sbjct: 680 LIFLTGQNEITTLVKKLRQE 699
Score = 39 (18.8 bits), Expect = 5.3e-37, Sum P(2) = 5.3e-37
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 346 STVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQ 403
ST+ +DE +DV + E + + V + S+ D +L D+ + +E E+ ++
Sbjct: 706 STIQYDENIDVKLSENVQQEVE-DVDF--SVQSGDAGILD-DYEEGEENEEEEEGFEE 759
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 387 (141.3 bits), Expect = 4.3e-76, Sum P(3) = 4.3e-76
Identities = 86/203 (42%), Positives = 120/203 (59%)
Query: 223 QDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNI 282
+D+ E + K ED I DE +LPL+ +LP Q+RVF PP R +V+TN+
Sbjct: 822 EDEDEFEIGK-EDIITEDDEKPAGPLFVLPLYSTLPTSKQMRVFQTPPLGSRLVVVATNL 880
Query: 283 AETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYR 342
AETSLT+ + YV+D G VKQR YN +G+ S +V SK A+QR GRAGRT PG CYR
Sbjct: 881 AETSLTIPNIKYVVDTGRVKQRYYNKDNGISSFEVGWTSKASADQRAGRAGRTGPGHCYR 940
Query: 343 LYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALK 402
+Y S V++D F + PEI + G +L +KS+ + I F F PP SL+ AL+
Sbjct: 941 IYSSAVFNDHFQQFSKPEILMIPIDGMILQMKSMGIQKIT--GFPFPTPPDESSLKLALR 998
Query: 403 QLYLIDAID-ENGSITSIGRTMA 424
L + A++ + SIT +G M+
Sbjct: 999 TLINLGALEVKTFSITELGMKMS 1021
Score = 309 (113.8 bits), Expect = 4.3e-76, Sum P(3) = 4.3e-76
Identities = 73/163 (44%), Positives = 99/163 (60%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGY--TKSG----IIGVTQ 56
NLPI+ E +I GETGSGK+TQ+ Q L+ G+ +SG IIGVTQ
Sbjct: 404 NLPIMLEEHSIVEKIKDNDVVIICGETGSGKTTQVPQFLYESGFGHRESGDFPGIIGVTQ 463
Query: 57 PXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRT-SERTLIKYLTDGVLLREILSNPDL 115
P +EL V G+EVGY IR++ + S IK++TDG+L+RE+ ++ L
Sbjct: 464 PRRVAAVSTAKRVAEELNVEFGKEVGYQIRYDKKLDSSVNKIKFMTDGILMREVQTDFLL 523
Query: 116 SPYSVIILDEAHERSLNTDILLGLVKRLVNLRASK-LKILITS 157
S YS I++DEAHER+LNTDIL+GL+ R+V LR LK L T+
Sbjct: 524 SQYSSILIDEAHERNLNTDILIGLLSRIVPLRKKLYLKSLATN 566
Score = 143 (55.4 bits), Expect = 4.3e-76, Sum P(3) = 4.3e-76
Identities = 33/88 (37%), Positives = 51/88 (57%)
Query: 151 LKILITSATLDGEKVSK---FFSNCP-TLNVPGKLYPVEI-LHSKERPTSYLESALKTAI 205
LK+++ SATL E +K FS P +N+P + +PV I + K +Y++ K +
Sbjct: 580 LKLVVMSATLRVEDFTKNKTLFSRPPPVINIPTRQFPVTIHFNKKTELVNYIDECYKKVV 639
Query: 206 DIHVREPEGDVLIFMTGQDDIEKLVSKL 233
IH P G +L+F+TG+ +IE L SKL
Sbjct: 640 KIHKNLPSGGILVFVTGKQEIEYLCSKL 667
Score = 45 (20.9 bits), Expect = 8.9e-28, Sum P(2) = 8.9e-28
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 151 LKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERPTSYLESA 200
+K +IT+ +D ++SK T ++ GK +P ++ + TSY S+
Sbjct: 1207 IKQVITAGLID--QISKVKE---TQSITGKNHPKHLIEYQTCTTSYSNSS 1251
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 411 (149.7 bits), Expect = 9.7e-76, Sum P(2) = 9.7e-76
Identities = 87/192 (45%), Positives = 122/192 (63%)
Query: 234 EDKIRSLDEGSCMDAV-ILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGV 292
E KI + G+ + +LPL+ LP + Q+RVF PPP R +++TN+AETSLT+ G+
Sbjct: 660 EFKIEEEEAGTGPSRMHVLPLYSLLPTKEQLRVFEPPPDGSRLVVLATNVAETSLTIPGI 719
Query: 293 VYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDE 352
YV D G K+R+Y+ +G+ S +V ISK ANQR GRAGRT PG C+RLY S VY +
Sbjct: 720 RYVFDSGRSKERKYDQLTGVQSFEVGWISKASANQREGRAGRTGPGHCWRLYSSAVYERD 779
Query: 353 FLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDE 412
+ +PE+ R+SL G VL LKS++L +V+ F F PP +SL + K L I A+ E
Sbjct: 780 LDEFALPELLRTSLEGVVLQLKSMNLQ--HVVNFPFPTPPERDSLVKSEKLLKYISAVSE 837
Query: 413 NGSITSIGRTMA 424
G +T +G TM+
Sbjct: 838 EGRVTQVGYTMS 849
Score = 395 (144.1 bits), Expect = 9.7e-76, Sum P(2) = 9.7e-76
Identities = 93/249 (37%), Positives = 140/249 (56%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKS-----GIIGVTQPX 58
LP++ E+ I G TGSGK+TQ+ Q L GY G+IG+TQP
Sbjct: 357 LPVVSEEQRIMEAIHNNNIVVVCGATGSGKTTQIPQFLFEAGYGSPDSPTPGMIGITQPR 416
Query: 59 XXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPY 118
+ELG ++VGY IRFE ++ T +K++TDGVLLRE+ + L Y
Sbjct: 417 RVAAVSMSKRVAEELGDH-SQKVGYQIRFEGTVNKDTAVKFMTDGVLLREVAQDLALRKY 475
Query: 119 SVIILDEAHERSLNTDILLGLVKRLVNLRASK---------LKILITSATLDGEKVSK-- 167
S I++DEAHERS+NTDIL+G++ R++ LRA LK++I SATL E +++
Sbjct: 476 SAIVVDEAHERSVNTDILIGMLSRIIKLRAEMAQEDPTVKPLKLVIMSATLRIEDLTENK 535
Query: 168 --FFSNCPTLNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDD 225
F + P L V G+ YPV + +++ Y+E A + H + P G +L+F+TGQ++
Sbjct: 536 NLFATPPPVLEVEGRQYPVTLHFARKTHHDYVEEAFRKISRGHKKLPPGGMLVFLTGQNE 595
Query: 226 IEKLVSKLE 234
I +L +L+
Sbjct: 596 ITQLSKRLK 604
Score = 39 (18.8 bits), Expect = 1.4e-36, Sum P(2) = 1.4e-36
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 218 IFMTGQDDIEKLVSKLEDKIRSLDE 242
IF+ I +L +K +D IR+ D+
Sbjct: 885 IFIPENQAIPQLAAKEDDAIRTNDD 909
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
Identities = 166/422 (39%), Positives = 250/422 (59%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LPI +++ I IGETGSGKSTQ+ Q L +IGVTQP
Sbjct: 182 LPIYHHKDKIIEYINNNQVTIVIGETGSGKSTQIPQFLMPEN---PKMIGVTQPRRVAAA 238
Query: 64 XXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
+E G +LG++VGY +RF + T+ +T +KYLTDG+LLREI+ + +L+ YS IIL
Sbjct: 239 SLAARVSEEYGCKLGQDVGYQVRFTNMTNRQTKLKYLTDGMLLREIMLDSNLTKYSTIIL 298
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASK-LKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
DEAHER++ TD+++G +K+++ K LKI++ SATL+ E S FF N P L + GK+Y
Sbjct: 299 DEAHERTILTDLIMGFLKQIITSGKRKDLKIVVMSATLNAELFSNFFGNAPILYIEGKMY 358
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PV + +++ +++ I I++ EPEGDVL F+ GQ++I+ V LE L
Sbjct: 359 PVSQFYLDAESEDIVDTMIRSIIQINLNEPEGDVLCFLPGQEEIDNCVKSLEQLAPQLPR 418
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ + V LPL+ +L P Q ++F P R+ I++TNIAETS+TV GV YVID G K
Sbjct: 419 EAPL-IVPLPLYAALSPGQQSKIFEKLPKGRRKVILATNIAETSITVSGVKYVIDSGLRK 477
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
+ + + G+ +L IS+ A QR GRAGR GK +RLYP + Y EI+
Sbjct: 478 IKVWKHNLGLSTLLTTPISQASARQRAGRAGRESEGKVFRLYPESTYM-ALPKQQESEIK 536
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R+ + VL LK L + D+ L + +L+ P +++ AL LY + A++++G +T++G
Sbjct: 537 RNDIILPVLTLKKLGVDDL--LNWSWLEYPGQDAILSALNTLYTLGALNDSGKVTTLGYK 594
Query: 423 MA 424
M+
Sbjct: 595 MS 596
>UNIPROTKB|E1C094 [details] [associations]
symbol:E1C094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AADN02054197 EMBL:AADN02054196
IPI:IPI00591998 Ensembl:ENSGALT00000001141 Uniprot:E1C094
Length = 1164
Score = 761 (272.9 bits), Expect = 6.7e-75, P = 6.7e-75
Identities = 145/299 (48%), Positives = 201/299 (67%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LPI ++ + +GETGSGK+TQL+Q LH GYT G+IG TQP
Sbjct: 535 LPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAM 594
Query: 64 XXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
+E+GVRLGEEVGYAIRFED TSE T+IKY+TDG+LLRE L DL YS II+
Sbjct: 595 SVAKRVSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILLRESLREADLDNYSAIIM 654
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYP 183
DEAHERSLNTD+L GL++ +V R S LK+++TSAT+D +K + FF N P ++PG+ +P
Sbjct: 655 DEAHERSLNTDVLFGLLREVV-ARRSDLKLVVTSATMDADKFASFFGNVPIFHIPGRTFP 713
Query: 184 VEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEG 243
V+IL SK Y+E+A+K A+ +H+ GD+L+FM GQ+DIE ++ + + L++
Sbjct: 714 VDILFSKTPQEDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEELEKA 773
Query: 244 SCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ +LP++ LP ++Q ++F P R+ IV+TNIAETSLTVDG+++VID GY K
Sbjct: 774 PAL--AVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCK 830
>UNIPROTKB|F1NY80 [details] [associations]
symbol:F1NY80 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
EMBL:AADN02054197 EMBL:AADN02054196 IPI:IPI00821409
Ensembl:ENSGALT00000038723 Uniprot:F1NY80
Length = 1170
Score = 761 (272.9 bits), Expect = 7.0e-75, P = 7.0e-75
Identities = 145/299 (48%), Positives = 201/299 (67%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LPI ++ + +GETGSGK+TQL+Q LH GYT G+IG TQP
Sbjct: 538 LPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAM 597
Query: 64 XXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
+E+GVRLGEEVGYAIRFED TSE T+IKY+TDG+LLRE L DL YS II+
Sbjct: 598 SVAKRVSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILLRESLREADLDNYSAIIM 657
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYP 183
DEAHERSLNTD+L GL++ +V R S LK+++TSAT+D +K + FF N P ++PG+ +P
Sbjct: 658 DEAHERSLNTDVLFGLLREVV-ARRSDLKLVVTSATMDADKFASFFGNVPIFHIPGRTFP 716
Query: 184 VEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEG 243
V+IL SK Y+E+A+K A+ +H+ GD+L+FM GQ+DIE ++ + + L++
Sbjct: 717 VDILFSKTPQEDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEELEKA 776
Query: 244 SCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ +LP++ LP ++Q ++F P R+ IV+TNIAETSLTVDG+++VID GY K
Sbjct: 777 PAL--AVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCK 833
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 486 (176.1 bits), Expect = 1.0e-73, Sum P(3) = 1.0e-73
Identities = 109/251 (43%), Positives = 154/251 (61%)
Query: 176 NVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREP-EGDVLIFMTGQDDIEKLVSKLE 234
++ G+ +PV+ ++S E ++++ALK IH +EP GD+L+F+TGQ+ +E L + +
Sbjct: 364 HIKGRQFPVKTIYSPEPVHDFVDAALKVIFQIHYKEPIPGDILVFLTGQETVEALENLVN 423
Query: 235 DKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVY 294
+ +D S +LPL +LP Q RVF P PP R+ I++TNIAETS+TV GV Y
Sbjct: 424 EYATGMDP-SLPKIQVLPLFAALPQAAQQRVFVPAPPRTRKIILATNIAETSVTVSGVRY 482
Query: 295 VIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFL 354
V+DCG K +Q+ G+ SL V ISK A QR GRAGR PG+CYRLY Y L
Sbjct: 483 VVDCGKAKIKQFRTRLGLDSLLVKPISKSAAIQRKGRAGREAPGQCYRLYTEKDYLA--L 540
Query: 355 D-VTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDEN 413
D V PEI R L+ ++L +K+ + NV++F FL P E+LE AL QL I+A+DE
Sbjct: 541 DEVNTPEILRCDLSQAILNMKARGVD--NVIEFPFLTRPPREALEKALLQLLSIEALDET 598
Query: 414 GSITSIGRTMA 424
G I+ G +A
Sbjct: 599 GKISETGSHIA 609
Score = 231 (86.4 bits), Expect = 1.0e-73, Sum P(3) = 1.0e-73
Identities = 51/144 (35%), Positives = 84/144 (58%)
Query: 40 ILHRHGYTKSGIIG----VTQPXXXXXXXXXXXXXQELGVRLGE-----EVGYAIRFEDR 90
I+ +G K ++G +TQP +E+G LG +VGY++RF+
Sbjct: 197 IVQENGSKKEAVVGGCIAITQPRRVAAISLARRVAEEMGTPLGSSSPASKVGYSVRFDTS 256
Query: 91 TSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVN-LRAS 149
S T +K+LT+G+LL+E+L +P L+ YS I++DE HER +N D+++G ++ LV+ R
Sbjct: 257 VSPSTRVKFLTEGMLLQEMLHDPWLTKYSAIVVDEVHERGVNVDLVMGFLRNLVSGKREG 316
Query: 150 K----LKILITSATLDGEKVSKFF 169
+ LK ++ SAT D E + +FF
Sbjct: 317 RGGVPLKAVVMSATADMESLQEFF 340
Score = 78 (32.5 bits), Expect = 1.0e-73, Sum P(3) = 1.0e-73
Identities = 18/39 (46%), Positives = 21/39 (53%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQIL 41
NLPI + + I IGETGSGKSTQ+ Q L
Sbjct: 146 NLPIFAHGDEIRQHLRKNDVMLLIGETGSGKSTQIPQFL 184
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
Identities = 156/352 (44%), Positives = 230/352 (65%)
Query: 81 VGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLV 140
VGY +RF+D TSE T IK+LTDG+LLRE +S+ L YS +ILDEAHER+++TD+L G+V
Sbjct: 61 VGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVV 120
Query: 141 K----RLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERPTSY 196
K R L LK+++ SAT+D + S++F+ P L + G+ +P+++ ++K+ Y
Sbjct: 121 KAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDY 180
Query: 197 LESALKTAIDIHVREPEG-DVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHG 255
L +AL + IH P D+L+F+TGQ++IE + D + L +G C ++LPL+
Sbjct: 181 LHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMSKTCRDIAKHLPDG-CPAMLVLPLYA 239
Query: 256 SLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSL 315
SLP Q+RVF P R+ I+STNIAETS+T+ G+ YV+D G VK ++YNP SG+ L
Sbjct: 240 SLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVL 299
Query: 316 DVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKS 375
V ++SK QA QR GRAGR G CYRLY + ++F +TVPEIQR +LA +L L +
Sbjct: 300 AVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEF-EKFDKMTVPEIQRCNLASVMLQLLA 358
Query: 376 LDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI---DENGSITSIGRTMA 424
+ + NVL FDF+ PS + ++ A+ QL L+ A+ D+ ++T +GR MA
Sbjct: 359 MKVP--NVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMA 408
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
Identities = 165/424 (38%), Positives = 251/424 (59%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQ-ILHR-HGYTKSGIIGVTQPXXXX 61
LP+ Q++ I IGETGSGKSTQ+ Q +L + + K G I VTQP
Sbjct: 81 LPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEKLYDTKKHGSIAVTQPRRVA 140
Query: 62 XXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
QE G +LGE+VGY++RF++ T+ RT +KYLTDG+LLRE++ N DL YSVI
Sbjct: 141 AINLATRVAQEHGCKLGEQVGYSVRFDNTTTTRTRLKYLTDGMLLRELMMNSDLREYSVI 200
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
++DEAHER++ TD++LG +K L+ L+I++ SATL EK S+FF+N P L V G+
Sbjct: 201 VIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSEFFNNAPILFVEGRK 260
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLD 241
+ V+ + K +++ ++ I I+ E GD+L F+ GQ++I+K V+ +E + +
Sbjct: 261 FDVKQYYLKAPTDDIVDAVIRCCIQINQGEELGDILCFLPGQEEIDKAVTIMEKIAKYVS 320
Query: 242 EGSCMDAVI-LPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGY 300
+ + + ++ PL+ +LP Q VF+P R+ + STNIAETS+T+ GV +V+D G
Sbjct: 321 DEAPVPLIVPYPLYAALPAVQQSLVFAPIKGFKRKVVFSTNIAETSVTISGVKFVVDSGL 380
Query: 301 VKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPE 360
K + + G+ +L V IS+ A QR GRAGR GK +RLY + Y + + PE
Sbjct: 381 RKVKVWRHQLGLATLLTVPISQASAMQRSGRAGRESEGKSFRLYCESDYV-KLPKQSEPE 439
Query: 361 IQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIG 420
I RS + VL LK + D+ L + + + P E++ L++LY + A+D G IT G
Sbjct: 440 IARSDVTSPVLMLKRYGVDDL--LNWTWFENPGKEAIVMGLQELYELGALDTRGKITKRG 497
Query: 421 RTMA 424
+ MA
Sbjct: 498 QQMA 501
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 408 (148.7 bits), Expect = 1.8e-73, Sum P(2) = 1.8e-73
Identities = 96/239 (40%), Positives = 136/239 (56%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKS-GIIGVTQPXXXXX 62
LPIL E+ I GETGSGK+TQ+ Q L+ GYT S GIIG+T+P
Sbjct: 242 LPILAEEQVIMEAINENPIVVICGETGSGKTTQVPQFLYEAGYTSSNGIIGITEPRRVAA 301
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E+ + V Y IR+E T++ T IK++TDGVLL+E+ + LS Y VII
Sbjct: 302 VSMSQRVAKEMNLS-HRVVSYQIRYEGNTTDETQIKFMTDGVLLKEVQKDFLLSKYKVII 360
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASK---LKILITSATL---DGEKVSKFFSNCP-TL 175
+DEAHERS+ TDIL+GL+ R+V LR K LK++I SATL D + ++ F+ P L
Sbjct: 361 IDEAHERSMYTDILIGLLSRIVPLREKKGLPLKLIIMSATLRVEDFTENTRLFAGTPPVL 420
Query: 176 NVPGKLYPVEILHSKERPTS-YLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKL 233
V + +PV + +K+ P Y + IH P G +L+F+TGQ ++ L +L
Sbjct: 421 QVDARQFPVTVHFNKKTPLDDYSGECFRKVCKIHRMLPSGGILVFLTGQAEVHSLCRRL 479
Score = 376 (137.4 bits), Expect = 1.8e-73, Sum P(2) = 1.8e-73
Identities = 77/169 (45%), Positives = 107/169 (63%)
Query: 244 SCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQ 303
S + +LPL+ L PE Q +VF PPPP R +V+TN+AETSLT+ G+ YV+DCG VK+
Sbjct: 573 SSLPLYVLPLYSLLAPEKQAKVFRPPPPGTRLCVVATNVAETSLTIPGIKYVVDCGKVKK 632
Query: 304 RQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQR 363
R Y+ +G+ S V IS+ ANQR GRAGRT PG CYRLY S V+ D F + PEI +
Sbjct: 633 RFYDKITGVSSFRVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFMD-FEKFSAPEITK 691
Query: 364 SSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDE 412
+ +L +K+L++ V+ F F PP +E+L A + L + A+ E
Sbjct: 692 RPVEDLILQMKALNIE--KVINFPFPTPPPTEALAAAEELLIALGALKE 738
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 393 (143.4 bits), Expect = 2.8e-73, Sum P(2) = 2.8e-73
Identities = 96/253 (37%), Positives = 136/253 (53%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKS------GIIGVTQP 57
LP+ E I GETGSGK+TQ+ Q L+ G+ G++G+TQP
Sbjct: 391 LPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGAEDSPDYPGMVGITQP 450
Query: 58 XXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSP 117
ELG G +VGY IRF+ E T +K++TDGVLLRE++ + L+
Sbjct: 451 RRVAAVSMAERVANELGDH-GHKVGYQIRFDSTAKEDTKVKFMTDGVLLREMMHDFKLTK 509
Query: 118 YSVIILDEAHERSLNTDILLGLVKRLVNLRAS----------KLKILITSATLDGEKVSK 167
YS II+DEAHER++NTDIL+G++ R V LRA KLK++I SATL +VS
Sbjct: 510 YSSIIIDEAHERNINTDILIGMLSRCVRLRAKLHKENPIEHKKLKLIIMSATL---RVSD 566
Query: 168 FFSNC-------PTLNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFM 220
F N P L V + +PV I ++ +Y + A + IH + P G +L+F+
Sbjct: 567 FSENKTLFPIAPPVLQVDARQFPVSIHFNRRTAFNYTDEAFRKTCKIHQKLPPGAILVFL 626
Query: 221 TGQDDIEKLVSKL 233
TGQ +I +V +L
Sbjct: 627 TGQQEITHMVKRL 639
Score = 391 (142.7 bits), Expect = 2.8e-73, Sum P(2) = 2.8e-73
Identities = 91/220 (41%), Positives = 129/220 (58%)
Query: 207 IHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEG-SCMDAV-ILPLHGSLPPEMQVR 264
I E EG+ G+D+ ++ E+ L EG + D + +LPL+ LP + Q+R
Sbjct: 692 IRYEEDEGNS---GNGEDEEDEEEEGFEEV---LTEGQTANDPLYVLPLYSLLPTKEQMR 745
Query: 265 VFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQ 324
VF PP R IV+TN+AETSLT+ GV YV+D G K+R+YN S+G+ S +V +SK
Sbjct: 746 VFQKPPQGSRLCIVATNVAETSLTIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSKAS 805
Query: 325 ANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVL 384
ANQR GRAGRT PG CYRLY S V+ +F + PEI R + VL +KS+ + N++
Sbjct: 806 ANQRSGRAGRTGPGHCYRLYSSAVFEHDFEQFSKPEILRMPVESIVLQMKSMAIH--NII 863
Query: 385 KFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
F F PP +L A++ L + A+D IT G+ M+
Sbjct: 864 NFPFPTPPDRVALSKAIQLLQYLGALDNKEMITEDGKKMS 903
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 732 (262.7 bits), Expect = 2.0e-72, P = 2.0e-72
Identities = 166/441 (37%), Positives = 253/441 (57%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LPI E+ + IGETGSGKSTQ+ Q+ R G SG I VTQP
Sbjct: 161 LPIDAVEQQLMYELASQETLIVIGETGSGKSTQVPQLCVRAGIANSGSIAVTQPRRVAAI 220
Query: 64 XXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
E+G +G VGY +RFE+ T +T I+Y+TDG++LR+ L +P L YS +I+
Sbjct: 221 SLASRVATEMGTNIGGIVGYHVRFENATCHKTKIEYMTDGIVLRKALVSPLLDKYSCVII 280
Query: 124 DEAHERSLNTDILLGLVKRLVNLRA---SKLKILITSATLDGEKVSKFFSNCPTLNVPGK 180
DEAHERSL++D+L+ ++++ + R + L+++I SATL EK +F+N + V G+
Sbjct: 281 DEAHERSLHSDVLMCILRQCQDQRRETNNPLRLIIMSATLQAEKFQSYFNNAKVVLVAGR 340
Query: 181 LYPVEILHSKER------PTSYLESALKTAIDIHVREPEG-DVLIFMTGQDDIEKLVSKL 233
+P+E+ H + T Y+ +A+ +H+ EP+G D+L+F+TG ++IE + S+L
Sbjct: 341 TFPIEVFHVNPKINKSFSSTDYVYNAVICVKYVHLTEPKGRDILVFLTGSEEIEAVASQL 400
Query: 234 EDKIRSLDEGSCMDAVI-LPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGV 292
+ SL + D ++ +PL+ +L PE Q F P R+ I+STNIAETS+T+ G+
Sbjct: 401 AELNGSLPASA--DVLMPVPLYAALRPEKQKEAFRKTPQGARKVIISTNIAETSVTIPGI 458
Query: 293 VYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDE 352
VID G VK +++ + + L V +SK QA QR GRAGR PGKCYRLY +H +
Sbjct: 459 RVVIDSGKVKTKRFEAFNRIDVLKVHNVSKAQAKQRAGRAGRDAPGKCYRLYSREDFH-K 517
Query: 353 FLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDE 412
F +PEI R +L+ + L L L + + + LK +DPP ++++ AL +L + AI
Sbjct: 518 FEAENMPEILRCNLSATFLELMKLGMKNPHRLKL--IDPPETDNINAALLELTSLGAIRP 575
Query: 413 -NGSITSIGRTMAGTSFFALP 432
N + T G +F P
Sbjct: 576 VNSDRSKFALTEMGDAFCMYP 596
>FB|FBgn0001330 [details] [associations]
symbol:kz "kurz" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AL009195 GeneTree:ENSGT00550000074985 KO:K14780
OMA:AKLQPRT EMBL:X64418 PIR:T13424 RefSeq:NP_476591.1 UniGene:Dm.33
ProteinModelPortal:O46072 SMR:O46072 STRING:O46072 PaxDb:O46072
PRIDE:O46072 EnsemblMetazoa:FBtr0070419 GeneID:31205
KEGG:dme:Dmel_CG3228 UCSC:CG3228-RA CTD:31205 FlyBase:FBgn0001330
InParanoid:O46072 OrthoDB:EOG4SN03P PhylomeDB:O46072
GenomeRNAi:31205 NextBio:772445 Bgee:O46072 GermOnline:CG3228
Uniprot:O46072
Length = 1192
Score = 432 (157.1 bits), Expect = 2.7e-72, Sum P(2) = 2.7e-72
Identities = 104/240 (43%), Positives = 138/240 (57%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LPIL E+ + GETGSGK+TQL Q L+ GY + +IGVT+P
Sbjct: 260 LPILAEEQQVMETINENPIVIVAGETGSGKTTQLPQFLYEAGYAQHKMIGVTEPRRVAAI 319
Query: 64 XXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
E+ + EV Y IRFE + T IK++TDGVLL+EI ++ LS YSVIIL
Sbjct: 320 AMSKRVAHEMNLP-ESEVSYLIRFEGNVTPATRIKFMTDGVLLKEIETDFLLSKYSVIIL 378
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASK---LKILITSATLDGEKVSKFFSNC-------P 173
DEAHERS+ TDIL+GL+ R+V LR + LK++I SATL +VS F N P
Sbjct: 379 DEAHERSVYTDILVGLLSRIVPLRHKRGQPLKLIIMSATL---RVSDFTENTRLFKIPPP 435
Query: 174 TLNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKL 233
L V + +PV I K P Y+ A + + IH + PEG +LIF+TGQ ++ +LV KL
Sbjct: 436 LLKVEARQFPVTIHFQKRTPDDYVAEAYRKTLKIHNKLPEGGILIFVTGQQEVNQLVRKL 495
Score = 341 (125.1 bits), Expect = 2.7e-72, Sum P(2) = 2.7e-72
Identities = 78/209 (37%), Positives = 118/209 (56%)
Query: 203 TAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQ 262
T D+H + E D + +D+ ++L LED+ + G +LPL+ L E Q
Sbjct: 576 TEADMHEQPDEDDEQEGLE-EDNDDEL--GLEDE-SGMGSGQRQPLWVLPLYSLLSSEKQ 631
Query: 263 VRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISK 322
R+F P P CR +VSTN+AETSLT+ + YV+DCG K R Y+ +G+ + V SK
Sbjct: 632 NRIFLPVPDGCRLCVVSTNVAETSLTIPHIKYVVDCGRQKTRLYDKLTGVSAFVVTYTSK 691
Query: 323 VQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDIN 382
A+QR GRAGR G CYRLY S VY+D F D + P+IQ+ + +L ++ + +
Sbjct: 692 ASADQRAGRAGRISAGHCYRLYSSAVYNDCFEDFSQPDIQKKPVEDLMLQMRCMGID--R 749
Query: 383 VLKFDFLDPPSSESLEDALKQLYLIDAID 411
V+ F F PP L+ A ++L ++ A++
Sbjct: 750 VVHFPFPSPPDQVQLQAAERRLIVLGALE 778
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 724 (259.9 bits), Expect = 1.3e-70, P = 1.3e-70
Identities = 176/432 (40%), Positives = 241/432 (55%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LP+ + I GETGSGK+TQL +I G G IG TQP
Sbjct: 74 LPVSERRGEIAEAIRQNQVVIVCGETGSGKTTQLPKICLEAGRGIQGYIGHTQPRRIAAR 133
Query: 64 XXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
EL LGE VGY +RF D+T +LIK +TDG+LL E ++ L Y +I+
Sbjct: 134 SVAARIADELKRPLGETVGYKVRFHDQTRPDSLIKLMTDGILLAETQTDRFLDQYDTLIV 193
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYP 183
DEAHERSLN D LLG +K L+ R LK++ITSAT+D E+ S+ F N P + VPG+ YP
Sbjct: 194 DEAHERSLNIDFLLGYLKWLLP-RRHDLKLVITSATIDPERFSRHFDNAPIVRVPGRTYP 252
Query: 184 VEILH----SKERPTSYLE----SALKTAID-IHVREPEGDVLIFMTGQDDIEKLVSKLE 234
VEI + S E + E A+ A+D +H RE GD+LIF++G+ +I
Sbjct: 253 VEIRYRPPDSAEEESDETERGEQQAILDAVDELH-RENTGDILIFLSGEREIR------- 304
Query: 235 DKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVY 294
D SL + D +LPL+ L Q ++F P RR +++TN+AETSLTV G+
Sbjct: 305 DTAESLRKHHPADCEVLPLYSRLTVSEQEKIFKPH--GRRRIVLATNVAETSLTVPGIRG 362
Query: 295 VIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVY--HDE 352
VID GY + +Y+ S + L + +IS+ ANQR GR GR PG C RLY + E
Sbjct: 363 VIDAGYARISRYSHRSKLQRLPIEKISRASANQRAGRCGRVGPGVCIRLYSEQDFLNRPE 422
Query: 353 FLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDE 412
F D PEI R++LA +L +K+L+L DI V F F++PP + D L+ L I+A+D
Sbjct: 423 FTD---PEILRTNLAAVILQMKALNLGDIRV--FPFVEPPDERLVRDGLRTLQEINALDA 477
Query: 413 NGSITSIGRTMA 424
G +T +GR +A
Sbjct: 478 QGRLTELGRRLA 489
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 381 (139.2 bits), Expect = 6.2e-70, Sum P(2) = 6.2e-70
Identities = 91/239 (38%), Positives = 132/239 (55%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTK-SGIIGVTQPXXXXX 62
LPIL E+ I GETGSGK+TQ+ Q L+ GY+ + IIG+T+P
Sbjct: 246 LPILAEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSDNSIIGITEPRRVAA 305
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E+ + V Y IR+E +E T IK++TDGVLL+EI + L Y V++
Sbjct: 306 VAMSQRVAKEMNLSQ-RVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLLLRYKVVL 364
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASK---LKILITSATLDGEKVSK----FFSNCPTL 175
+DEAHERS+ TDIL+GL+ R+V+LRA + LK+LI SATL E ++ F P +
Sbjct: 365 IDEAHERSVYTDILIGLLSRIVSLRAKRHLPLKLLIMSATLRVEDFTQNQRLFPQPPPVI 424
Query: 176 NVPGKLYPVEILHSKERPTS-YLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKL 233
V + +PV + +K P Y + IH P G +L+F+TGQ ++ L +L
Sbjct: 425 KVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEVHALCRRL 483
Score = 370 (135.3 bits), Expect = 6.2e-70, Sum P(2) = 6.2e-70
Identities = 80/185 (43%), Positives = 111/185 (60%)
Query: 250 ILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPS 309
+LPL+ L PE Q +VF PPP R +V+TN+AETSLT+ G+ YV+DCG VK+R Y+
Sbjct: 584 VLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYDRV 643
Query: 310 SGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGS 369
+G+ S V +S+ A+QR GRAGRT PG CYRLY S V+ D F PEI R +
Sbjct: 644 TGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFSD-FEQFPPPEITRRPVEDL 702
Query: 370 VLYLKSLDLSDINVLKFDFLDPPSSESL---EDALKQLYLIDAIDENGSITSIGRTMAGT 426
+L +K+L++ V+ F F PPS E+L E+ L L + A + S+ + R+ G
Sbjct: 703 ILQMKALNIE--KVINFPFPTPPSVEALIAAEELLIALGALQAPQKTESVKQLQRSWLGC 760
Query: 427 SFFAL 431
AL
Sbjct: 761 PITAL 765
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 382 (139.5 bits), Expect = 1.1e-69, Sum P(2) = 1.1e-69
Identities = 98/255 (38%), Positives = 137/255 (53%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKS-----GIIGVTQPX 58
LPI+ E+ I G TGSGK+TQL Q L G++ G+I +TQP
Sbjct: 398 LPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPGMIAITQPR 457
Query: 59 XXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPY 118
+EL +V Y IRF+ + T IK++TDG+LLRE+ S+ L+ Y
Sbjct: 458 RVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPDTAIKFMTDGILLRELSSDFLLTAY 516
Query: 119 SVIILDEAHERSLNTDILLGLVKRLVNLRA--SK-------LKILITSATL---DGEKVS 166
S +I+DEAHERS+NTDILLGL+ R+V LR SK LK++I SATL D +
Sbjct: 517 SAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSATLRVTDFSENK 576
Query: 167 KFFS-NCPTLNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDD 225
FS P + + + YPV I ++ YL+ A IH R P G +L+F+TGQ +
Sbjct: 577 LLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKVCLIHKRLPAGSILVFLTGQQE 636
Query: 226 IEKLVSKLEDK-IRS 239
+E+L L + +RS
Sbjct: 637 VEQLCQMLRKRFVRS 651
Score = 367 (134.2 bits), Expect = 1.1e-69, Sum P(2) = 1.1e-69
Identities = 79/201 (39%), Positives = 116/201 (57%)
Query: 224 DDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIA 283
+DI+++ + + DE M +LPL+ L E Q++VF P R IV+TN+A
Sbjct: 680 EDIDQVPTSSSSSVTYDDESEPM--YVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVA 737
Query: 284 ETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRL 343
ETS+T+ + YV+DCG K+R YN + + +V ISK A+QR GRAGRT PG CYRL
Sbjct: 738 ETSITIPNIRYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQRAGRAGRTGPGHCYRL 797
Query: 344 YPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQ 403
Y S V+ F ++PEI R+ + VL +K++++ N+ F F P LE +LK
Sbjct: 798 YSSAVFDSSFPLHSLPEILRTPVESIVLQMKNMNID--NIANFPFPTSPGRSRLEKSLKL 855
Query: 404 LYLIDAIDENGSITSIGRTMA 424
L + AID G +T +G M+
Sbjct: 856 LSNLGAIDSEGVLTKLGEQMS 876
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 387 (141.3 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
Identities = 94/239 (39%), Positives = 132/239 (55%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYT-KSGIIGVTQPXXXXX 62
LPIL E+ I GETGSGK+TQ+ Q L+ GY+ + IIGVT+P
Sbjct: 248 LPILAEEQAIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSEDSIIGVTEPRRVAA 307
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E+ + V Y IR+E +E T IK++TDGVLL+EI + L Y V+I
Sbjct: 308 VAMSQRVAKEMNLS-HRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLLLKYKVVI 366
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASK---LKILITSATLDGEKVSK----FFSNCPTL 175
+DEAHERS+ TDILLGL+ R+V LRA + LK+LI SATL E ++ F + P +
Sbjct: 367 IDEAHERSVYTDILLGLLSRIVALRAKRHLPLKLLIMSATLRVEDFTQNQRLFTTPPPVI 426
Query: 176 NVPGKLYPVEILHSKERPTS-YLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKL 233
V + +PV + +K P Y + IH P G +L+F+TGQ ++ L +L
Sbjct: 427 KVESRQFPVTVHFNKRTPLDDYSGECFRKVCKIHRMLPAGGILVFLTGQAEVHALCRRL 485
Score = 359 (131.4 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
Identities = 82/193 (42%), Positives = 115/193 (59%)
Query: 224 DDIEKLVSKLEDKI--RSLDEGSCMDAV----ILPLHGSLPPEMQVRVFSPPPPNCRRFI 277
D+ E L S L+ + +EG DA +LPL+ L PE Q +VF PPP R +
Sbjct: 551 DEEEALGSDLDLDLGDSEANEGEQPDASLPLHVLPLYSLLAPEKQAQVFKPPPEGTRLCV 610
Query: 278 VSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRP 337
++TN+AETSLT+ G+ YV+DCG VK+R Y+ +G+ S V +S+ A+QR GRAGRT P
Sbjct: 611 IATNVAETSLTIPGIKYVVDCGKVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEP 670
Query: 338 GKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESL 397
G CYRLY S V+ D F PEI R + +L +K+L++ V+ F F PPS E+L
Sbjct: 671 GHCYRLYSSAVFGD-FEQFPPPEITRRPVEDLILQMKALNIE--KVINFPFPTPPSVEAL 727
Query: 398 EDALKQLYLIDAI 410
A + L + A+
Sbjct: 728 IAAEELLIALGAL 740
Score = 349 (127.9 bits), Expect = 2.3e-68, Sum P(2) = 2.3e-68
Identities = 79/190 (41%), Positives = 112/190 (58%)
Query: 250 ILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPS 309
+LPL+ L PE Q +VF PPP R +++TN+AETSLT+ G+ YV+DCG VK+R Y+
Sbjct: 583 VLPLYSLLAPEKQAQVFKPPPEGTRLCVIATNVAETSLTIPGIKYVVDCGKVKKRYYDRV 642
Query: 310 SGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGS 369
+G+ S V +S+ A+QR GRAGRT PG CYRLY S V+ D F PEI R +
Sbjct: 643 TGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGD-FEQFPPPEITRRPVEDL 701
Query: 370 VLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDE---------------NG 414
+L +K+L++ V+ F F PPS E+L A + L + A+ +
Sbjct: 702 ILQMKALNIE--KVINFPFPTPPSVEALIAAEELLIALGALQAPPKQERMKKLQMSQLSC 759
Query: 415 SITSIGRTMA 424
IT++GRTM+
Sbjct: 760 PITALGRTMS 769
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 382 (139.5 bits), Expect = 5.6e-69, Sum P(2) = 5.6e-69
Identities = 92/239 (38%), Positives = 131/239 (54%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYT-KSGIIGVTQPXXXXX 62
LPIL E+ I GETGSGK+TQ+ Q L+ G++ + IIGVT+P
Sbjct: 39 LPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGVTEPRRVAA 98
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E+ + V Y IR+E +E T IK++TDGVLL+EI + L Y V+I
Sbjct: 99 VAMSQRVAKEMNLSQ-RVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLLLRYKVVI 157
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASK---LKILITSATLDGEKVSK----FFSNCPTL 175
+DEAHERS+ TDIL+GL+ R+V LRA + LK+LI SATL E ++ F P +
Sbjct: 158 IDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQNPRLFAKPPPVI 217
Query: 176 NVPGKLYPVEILHSKERPTS-YLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKL 233
V + +PV + +K P Y + IH P G +L+F+TGQ ++ L +L
Sbjct: 218 KVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEVHALCRRL 276
Score = 357 (130.7 bits), Expect = 5.6e-69, Sum P(2) = 5.6e-69
Identities = 83/190 (43%), Positives = 113/190 (59%)
Query: 250 ILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPS 309
+LPL+ L PE Q +VF PPP R +V+TN+AETSLT+ G+ YV+DCG VK+R Y+
Sbjct: 377 VLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYDRV 436
Query: 310 SGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGS 369
+G+ S V +S+ A+QR GRAGRT PG CYRLY S V+ D F PEI R +
Sbjct: 437 TGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGD-FEQFPPPEITRRPVEDL 495
Query: 370 VLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAID------------ENG--- 414
+L +K+L++ V+ F F PPS E+L A + L + A+ EN
Sbjct: 496 ILQMKALNVE--KVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQENRLSC 553
Query: 415 SITSIGRTMA 424
IT++GRTMA
Sbjct: 554 PITALGRTMA 563
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 336 (123.3 bits), Expect = 8.7e-69, Sum P(4) = 8.7e-69
Identities = 75/174 (43%), Positives = 107/174 (61%)
Query: 250 ILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPS 309
IL L+ SLP + Q +F P PPN R+ I+STNIAETS+T+ + YVID G VK + ++ +
Sbjct: 402 ILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVN 461
Query: 310 SGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGS 369
G L V QISK A QR GRAGR PG+ YR+Y Y + +PEI RS L
Sbjct: 462 RGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEY-ENMNPFLIPEIFRSDLTQI 520
Query: 370 VLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTM 423
L LK+++++ N L+F+F + P E + K L+ I+AID N ++T +G+ +
Sbjct: 521 YLELKAMNIN--NPLEFNFPENPRKELFVHSAKMLFKINAIDMNNNLTDLGKKL 572
Score = 295 (108.9 bits), Expect = 8.7e-69, Sum P(4) = 8.7e-69
Identities = 57/132 (43%), Positives = 88/132 (66%)
Query: 77 LGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDIL 136
+G VGY IRF++ S++T IK++TDG+L+REI+++P L Y +ILDE HERS+ TD+L
Sbjct: 98 IGNYVGYTIRFKNVCSDKTRIKFVTDGILIREIMNDPLLKKYKFLILDEIHERSIRTDVL 157
Query: 137 LGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERPTSY 196
LG K L+ R K+KI++ SAT D ++FF+N P + +P KL+ + I + + Y
Sbjct: 158 LGYTKILLQKR-KKIKIILMSATFDINIFNQFFNNPPIITIPHKLHKITIYYPRRNIEDY 216
Query: 197 LESALKTAIDIH 208
+ S + T + IH
Sbjct: 217 ILSVVSTILQIH 228
Score = 76 (31.8 bits), Expect = 8.7e-69, Sum P(4) = 8.7e-69
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 1 MANLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTK 48
M LPIL+Y+ I GETG GK+TQ+ QI++ + K
Sbjct: 1 MRELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINEIFFDK 48
Score = 71 (30.1 bits), Expect = 8.7e-69, Sum P(4) = 8.7e-69
Identities = 11/37 (29%), Positives = 28/37 (75%)
Query: 214 GDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVI 250
GD+L+F+ GQ++IE + L++K++ + +G+ ++ ++
Sbjct: 317 GDILVFLPGQEEIEMVNIMLKEKLKIIYKGNLLNKLM 353
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 336 (123.3 bits), Expect = 8.7e-69, Sum P(4) = 8.7e-69
Identities = 75/174 (43%), Positives = 107/174 (61%)
Query: 250 ILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPS 309
IL L+ SLP + Q +F P PPN R+ I+STNIAETS+T+ + YVID G VK + ++ +
Sbjct: 402 ILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVN 461
Query: 310 SGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGS 369
G L V QISK A QR GRAGR PG+ YR+Y Y + +PEI RS L
Sbjct: 462 RGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEY-ENMNPFLIPEIFRSDLTQI 520
Query: 370 VLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTM 423
L LK+++++ N L+F+F + P E + K L+ I+AID N ++T +G+ +
Sbjct: 521 YLELKAMNIN--NPLEFNFPENPRKELFVHSAKMLFKINAIDMNNNLTDLGKKL 572
Score = 295 (108.9 bits), Expect = 8.7e-69, Sum P(4) = 8.7e-69
Identities = 57/132 (43%), Positives = 88/132 (66%)
Query: 77 LGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDIL 136
+G VGY IRF++ S++T IK++TDG+L+REI+++P L Y +ILDE HERS+ TD+L
Sbjct: 98 IGNYVGYTIRFKNVCSDKTRIKFVTDGILIREIMNDPLLKKYKFLILDEIHERSIRTDVL 157
Query: 137 LGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERPTSY 196
LG K L+ R K+KI++ SAT D ++FF+N P + +P KL+ + I + + Y
Sbjct: 158 LGYTKILLQKR-KKIKIILMSATFDINIFNQFFNNPPIITIPHKLHKITIYYPRRNIEDY 216
Query: 197 LESALKTAIDIH 208
+ S + T + IH
Sbjct: 217 ILSVVSTILQIH 228
Score = 76 (31.8 bits), Expect = 8.7e-69, Sum P(4) = 8.7e-69
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 1 MANLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTK 48
M LPIL+Y+ I GETG GK+TQ+ QI++ + K
Sbjct: 1 MRELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINEIFFDK 48
Score = 71 (30.1 bits), Expect = 8.7e-69, Sum P(4) = 8.7e-69
Identities = 11/37 (29%), Positives = 28/37 (75%)
Query: 214 GDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVI 250
GD+L+F+ GQ++IE + L++K++ + +G+ ++ ++
Sbjct: 317 GDILVFLPGQEEIEMVNIMLKEKLKIIYKGNLLNKLM 353
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 382 (139.5 bits), Expect = 1.2e-68, Sum P(2) = 1.2e-68
Identities = 92/239 (38%), Positives = 131/239 (54%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYT-KSGIIGVTQPXXXXX 62
LPIL E+ I GETGSGK+TQ+ Q L+ G++ + IIGVT+P
Sbjct: 252 LPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGVTEPRRVAA 311
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E+ + V Y IR+E +E T IK++TDGVLL+EI + L Y V+I
Sbjct: 312 VAMSQRVAKEMNLSQ-RVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLLLRYKVVI 370
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASK---LKILITSATLDGEKVSK----FFSNCPTL 175
+DEAHERS+ TDIL+GL+ R+V LRA + LK+LI SATL E ++ F P +
Sbjct: 371 IDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQNPRLFAKPPPVI 430
Query: 176 NVPGKLYPVEILHSKERPTS-YLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKL 233
V + +PV + +K P Y + IH P G +L+F+TGQ ++ L +L
Sbjct: 431 KVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEVHALCRRL 489
Score = 357 (130.7 bits), Expect = 1.2e-68, Sum P(2) = 1.2e-68
Identities = 83/190 (43%), Positives = 113/190 (59%)
Query: 250 ILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPS 309
+LPL+ L PE Q +VF PPP R +V+TN+AETSLT+ G+ YV+DCG VK+R Y+
Sbjct: 590 VLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYDRV 649
Query: 310 SGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGS 369
+G+ S V +S+ A+QR GRAGRT PG CYRLY S V+ D F PEI R +
Sbjct: 650 TGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGD-FEQFPPPEITRRPVEDL 708
Query: 370 VLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAID------------ENG--- 414
+L +K+L++ V+ F F PPS E+L A + L + A+ EN
Sbjct: 709 ILQMKALNVE--KVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQENRLSC 766
Query: 415 SITSIGRTMA 424
IT++GRTMA
Sbjct: 767 PITALGRTMA 776
>ZFIN|ZDB-GENE-030131-4505 [details] [associations]
symbol:dhx37 "DEAH (Asp-Glu-Ala-His) box
polypeptide 37" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4505 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780
CTD:57647 HOVERGEN:HBG051356 OMA:AKLQPRT EMBL:CABZ01014508
EMBL:CABZ01038687 EMBL:CABZ01038688 EMBL:CABZ01038689
EMBL:CABZ01038690 EMBL:CABZ01038691 EMBL:CABZ01038692
EMBL:CABZ01038693 EMBL:CABZ01038694 EMBL:CABZ01038695
EMBL:CABZ01038696 EMBL:CU469504 EMBL:FP085395 IPI:IPI00488738
RefSeq:NP_001076473.2 UniGene:Dr.79711 Ensembl:ENSDART00000090731
Ensembl:ENSDART00000127153 GeneID:100009635 KEGG:dre:100009635
NextBio:20787816 Uniprot:B8JLP0
Length = 1152
Score = 378 (138.1 bits), Expect = 1.2e-68, Sum P(2) = 1.2e-68
Identities = 93/239 (38%), Positives = 130/239 (54%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPXXXXX 62
LP+L E+ I GETGSGK+TQ+ Q L+ G+ SG IIGVT+P
Sbjct: 252 LPVLAEEQIIMEAVKDHECVVLCGETGSGKTTQVPQFLYEAGFASSGGIIGVTEPRRVAA 311
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
E+ + G V Y IR+E +E T IK +TDGVLL+EI + L YSVII
Sbjct: 312 ISMSHRVATEMNLSSGV-VSYQIRYEGNVTENTKIKVMTDGVLLKEIQRDFLLQKYSVII 370
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASK---LKILITSATLDGEKVSK----FFSNCPTL 175
+DEAHERS+ TDIL+GL+ R+V LR K +K++I SATL E ++ F S P +
Sbjct: 371 IDEAHERSVYTDILIGLLSRIVPLRNKKGLPMKLIIMSATLRVEDFTENKRLFSSPPPVI 430
Query: 176 NVPGKLYPVEILHSKERPTS-YLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKL 233
V + + V + +K P Y + IH P G +L+F+TGQ ++ + +L
Sbjct: 431 KVEARQFAVTVHFNKRTPMDDYTGETFRKICKIHRMLPPGGILVFLTGQAEVHSVCRRL 489
Score = 361 (132.1 bits), Expect = 1.2e-68, Sum P(2) = 1.2e-68
Identities = 77/163 (47%), Positives = 104/163 (63%)
Query: 250 ILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPS 309
+LPL+ L PE Q +VF PPP R +V+TN+AETSLT+ G+ YV+DCG VK+R Y+
Sbjct: 582 VLPLYSLLAPEQQAKVFRPPPAGSRLCVVATNVAETSLTIPGIKYVVDCGRVKKRFYDRV 641
Query: 310 SGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGS 369
+G+ S V IS+ ANQR GRAGRT PG CYRLY S V+ D F + EI R +
Sbjct: 642 TGVSSFKVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFGD-FSLFSEAEITRRPVEDL 700
Query: 370 VLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDE 412
VL +K L++ V+ F F PPSSE+L A + L + A+++
Sbjct: 701 VLQMKDLNIE--KVVNFPFPTPPSSEALIAAEELLISLGALEK 741
Score = 43 (20.2 bits), Expect = 2.1e-33, Sum P(2) = 2.1e-33
Identities = 11/39 (28%), Positives = 24/39 (61%)
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATL 160
+L++ +++ ++L L + V L ++LK+L T+A L
Sbjct: 82 VLEQKDKKAHRAEVLSKLAE--VQLPEAELKLLYTTAKL 118
>UNIPROTKB|E1BNQ2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 EMBL:DAAA02045204
IPI:IPI00698261 RefSeq:NP_001192890.1 UniGene:Bt.8113 PRIDE:E1BNQ2
Ensembl:ENSBTAT00000027206 GeneID:529207 KEGG:bta:529207
OMA:ANCRDAL NextBio:20874985 Uniprot:E1BNQ2
Length = 1155
Score = 378 (138.1 bits), Expect = 3.1e-68, Sum P(2) = 3.1e-68
Identities = 91/239 (38%), Positives = 130/239 (54%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTK-SGIIGVTQPXXXXX 62
LPIL E+ I GETGSGK+TQ+ Q L+ GY+ + +IGVT+P
Sbjct: 250 LPILSEEQVIMEAVAEHPIVIICGETGSGKTTQVPQFLYEAGYSSDNSVIGVTEPRRVAA 309
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E+ + V Y IR+E +E T IK++TDGVLL+EI + L Y V+I
Sbjct: 310 VAMSQRVAKEMNLS-PRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLLLKYKVVI 368
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASK---LKILITSATLDGEKVSK----FFSNCPTL 175
+DEAHERS+ TDIL+GL+ R+V LR + LK+LI SATL E ++ F P +
Sbjct: 369 IDEAHERSVYTDILIGLLSRIVCLREKRHLPLKLLIMSATLRVEDFTQNQRLFTQPPPVI 428
Query: 176 NVPGKLYPVEILHSKERPTS-YLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKL 233
V + +PV + +K P Y + IH P G +L+F+TGQ ++ L +L
Sbjct: 429 KVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEVHALCRRL 487
Score = 357 (130.7 bits), Expect = 3.1e-68, Sum P(2) = 3.1e-68
Identities = 74/161 (45%), Positives = 102/161 (63%)
Query: 250 ILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPS 309
+LPL+ L PE Q +VF PPP R +V+TN+AETSLT+ G+ YV+DCG VK+R Y+
Sbjct: 588 VLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYDRV 647
Query: 310 SGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGS 369
+G+ S V +S+ A+QR GRAGRT PG CYRLY S V+ D F PEI R +
Sbjct: 648 TGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGD-FEKYPPPEITRRPVEDL 706
Query: 370 VLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI 410
+L +K+L++ V+ F F PPS E+L A + L + A+
Sbjct: 707 ILQMKALNIE--KVINFPFPTPPSVEALIAAEELLIALGAL 745
>UNIPROTKB|I3LU50 [details] [associations]
symbol:I3LU50 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00700000104421
Ensembl:ENSSSCT00000026672 OMA:GHEVAFS Uniprot:I3LU50
Length = 265
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 131/258 (50%), Positives = 182/258 (70%)
Query: 71 QELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERS 130
+E+G LGEEVGYAIRFED TSE TLIKY+TDG+LLRE L DL YS II+DEAHERS
Sbjct: 9 EEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERS 68
Query: 131 LNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSK 190
LNTD+L GL++ +V R S LK+++TSAT+D EK + FF N P ++PG+ +PV+IL SK
Sbjct: 69 LNTDVLFGLLREVV-ARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFSK 127
Query: 191 ERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVI 250
Y+E+A+K ++ +H+ GD+LIFM GQ+DIE ++ + + L+ + +
Sbjct: 128 TPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPAL--AV 185
Query: 251 LPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSS 310
LP++ LP ++Q ++F P R+ IV+TNIAETSLTVDG+++VID GY K + +NP
Sbjct: 186 LPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRI 245
Query: 311 GMYSLDVVQISKVQANQR 328
GM +L + IS+ ANQR
Sbjct: 246 GMDALQIYPISQANANQR 263
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 163/433 (37%), Positives = 240/433 (55%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LP+ ++ I TGSGK+TQL ILH GY + G IGVTQP
Sbjct: 7 LPVYSQKDKILSALAHHHVIVVESPTGSGKTTQLPLILHEAGYNEGGAIGVTQPRRIAVL 66
Query: 64 XXXXXXXQE-LGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
++ L V+ G VGY +RFED T T IK +TDG+LL+E+ +P LS YS+I+
Sbjct: 67 SVSEFIAKQVLHVQPGI-VGYKMRFEDHTDVETKIKVMTDGILLQEMKLDPLLSKYSIIM 125
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
+DEAHERSLN D +LGL+KR++ R +I+I+SAT++ S++F+ CP + + Y
Sbjct: 126 VDEAHERSLNIDFILGLLKRVLQQRHD-FRIVISSATINTAMFSRYFNECPVIKIDAVAY 184
Query: 183 PVEIL----------HSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSK 232
PV ++ H+KE + LE + + +G +LIF+ G+ I+ +++
Sbjct: 185 PVTVIFDPPDTPASTHTKEAEAALLEKIVCIVERVIASRDKGAILIFLPGERSIKNCITR 244
Query: 233 LEDK--IRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVD 290
L + R L +LPL+G L E Q +VF+ P R+ +++TNIAETS+T+D
Sbjct: 245 LSHERWFRKL--------FLLPLYGRLSKEEQEQVFNRAPFGKRKVVIATNIAETSITID 296
Query: 291 GVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYH 350
V VID G VK YNP S SLD IS+ NQR GRAGR R G CYRLY +
Sbjct: 297 DVTTVIDSGLVKLNSYNPLSYTASLDETPISQASCNQRRGRAGRVRAGTCYRLYSRDDF- 355
Query: 351 DEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI 410
++ T+ EI R+ L+ V+ + L + D FDF+ PP + + A L L+ A+
Sbjct: 356 EQREPYTLEEIYRTDLSEVVMRMAELGIHDFE--HFDFISPPGTHGIIGAEDTLRLLGAL 413
Query: 411 DENGSITSIGRTM 423
+++ S++ IG+ M
Sbjct: 414 EDDRSLSEIGKMM 426
>UNIPROTKB|G4NBP1 [details] [associations]
symbol:MGG_00523 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP2" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CM001235 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 RefSeq:XP_003718533.1 EnsemblFungi:MGG_00523T0
GeneID:2674513 KEGG:mgr:MGG_00523 Uniprot:G4NBP1
Length = 803
Score = 464 (168.4 bits), Expect = 4.8e-67, Sum P(3) = 4.8e-67
Identities = 108/254 (42%), Positives = 151/254 (59%)
Query: 174 TLNVPGKLYPVEILHSKERPTSYL-ESALKTAIDIHVREP-EGDVLIFMTGQDDIEKLVS 231
TL + G+ +PVEI+HS +P L + +KT IH EP GD+L+F+ GQ+ IE++
Sbjct: 339 TLKIEGRQFPVEIIHSP-KPVPVLADEVVKTVFKIHCGEPLPGDILVFLYGQEPIEEIQR 397
Query: 232 KLEDKIRSLDEGSCMDAV-ILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVD 290
+E+ +L S + + LPL G L E Q F P R+ +++TNIAETS+TV
Sbjct: 398 LIEEYAATL--ASDVPKIKALPLFGQLSMEAQHTAFRPLKGRVRKVVLATNIAETSVTVP 455
Query: 291 GVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYH 350
GV YVID G K +QY S G+ SL V ISK A QR GRAGR PGKCYRLY VY
Sbjct: 456 GVRYVIDTGKSKMKQYRASLGLESLLVDAISKSSAIQRAGRAGREAPGKCYRLYTEDVYK 515
Query: 351 DEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI 410
E D +PEI R+++ + L + + + D+ L F +D P +E A+ QL ++ AI
Sbjct: 516 -EMRDADLPEILRNNVREAALIMMARGVDDL--LTFPLMDTPKISRMEKAMVQLNILGAI 572
Query: 411 DENGSITSIGRTMA 424
D+ G+IT +G+ MA
Sbjct: 573 DDEGAITELGKKMA 586
Score = 192 (72.6 bits), Expect = 4.8e-67, Sum P(3) = 4.8e-67
Identities = 49/141 (34%), Positives = 76/141 (53%)
Query: 50 GIIGVTQPXXXXXXXXXXXXXQELGVRL------GEE-------VGYAIRFEDRTSERTL 96
G+I VTQP +E G L G + VGY++RF+ + T
Sbjct: 181 GMIAVTQPRRVAATTLAHRVAREAGTPLQPSGTSGAKPGAAEGLVGYSVRFDHNVPKGTK 240
Query: 97 IKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASK------ 150
IK+LT+G+LL+E+L +P L YS +++DE HER ++ D+L G +K+++ L K
Sbjct: 241 IKFLTEGMLLQELLHDPSLRQYSAVVVDEVHERGIDVDLLCGFLKQML-LSPDKPGRGGL 299
Query: 151 -LKILITSATLDGEKVSKFFS 170
LK++ SAT + E + FFS
Sbjct: 300 PLKVVAMSATANIETLENFFS 320
Score = 76 (31.8 bits), Expect = 4.8e-67, Sum P(3) = 4.8e-67
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQP 57
LPI Q++ I +GETGSGKSTQ+ Q L + + + +T P
Sbjct: 117 LPIWQHQGAIREHLRKNDVLILVGETGSGKSTQVPQFLADEEWCRPRQVIMTLP 170
Score = 37 (18.1 bits), Expect = 7.3e-15, Sum P(3) = 7.3e-15
Identities = 5/13 (38%), Positives = 11/13 (84%)
Query: 209 VREPEGDVLIFMT 221
+R EGD+++++T
Sbjct: 645 LRRREGDLMVYLT 657
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 688 (247.2 bits), Expect = 6.0e-67, P = 6.0e-67
Identities = 161/433 (37%), Positives = 244/433 (56%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
+LPI QY + I G+TG GKSTQ+ Q L G I TQP
Sbjct: 161 SLPIFQYRDKIVELVRTHPVVVVAGDTGCGKSTQVPQYLLASGINN---IACTQPRRIAC 217
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
E + G +VGY IRFE + T + +LT+G+LLR+I + L Y V+I
Sbjct: 218 ISLAKRVSFESLNQYGSKVGYQIRFETSRTLATKLLFLTEGLLLRQIQQDASLGQYQVLI 277
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
+DE HER L+ D LLG+++ L++LR L++++ SAT++ + S +F++ P L VPG+L+
Sbjct: 278 VDEVHERHLHCDFLLGVLRSLLSLRPD-LRLVLMSATINIKLFSSYFNDAPVLQVPGRLF 336
Query: 183 PVEILHSKERPTSYLESA--------LKTAIDIHVREPE---GDVLIFMTGQDDIEKLVS 231
P+++++ P + + L+ I R P+ GD+L+F++G +I S
Sbjct: 337 PIQVIYQPIPPEEQVSRSEKLDPRPYLRVLQGIDQRYPQEERGDLLLFLSGVAEI----S 392
Query: 232 KLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDG 291
+++ ++ + ++LPLH +L Q +VF PP R+ I+STNIAETS+T+DG
Sbjct: 393 TIQEACQTYATHT-QRWIVLPLHSTLSLAQQDKVFDIAPPGVRKCIISTNIAETSVTIDG 451
Query: 292 VVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHD 351
V +V+D G VK+ ++P + M L IS+ + QR GRAGRT PG CYRLY + Y D
Sbjct: 452 VRFVVDSGKVKEMSFDPKAKMQRLQEFWISRASSEQRKGRAGRTGPGVCYRLYSESDY-D 510
Query: 352 EFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAID 411
F VPEI R +L +L +KS+ L D F F+DPP + S++ A+ L A+D
Sbjct: 511 AFAPYPVPEIHRVALDSLILQMKSMGLGDPRT--FTFIDPPPASSIQTAVTYLREQGALD 568
Query: 412 ENGSITSIGRTMA 424
E+G +TSIGR +A
Sbjct: 569 EHGELTSIGRLLA 581
>WB|WBGene00015525 [details] [associations]
symbol:rha-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0071688 GO:GO:0000003 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:AKLQPRT EMBL:FO080280 PIR:H88533 RefSeq:NP_498895.1
UniGene:Cel.10874 ProteinModelPortal:P34305 SMR:P34305
IntAct:P34305 STRING:P34305 PaxDb:P34305 EnsemblMetazoa:C06E1.10
GeneID:176207 KEGG:cel:CELE_C06E1.10 UCSC:C06E1.10 CTD:176207
WormBase:C06E1.10 InParanoid:P34305 NextBio:891582 Uniprot:P34305
Length = 1148
Score = 395 (144.1 bits), Expect = 1.4e-66, Sum P(2) = 1.4e-66
Identities = 94/245 (38%), Positives = 138/245 (56%)
Query: 2 ANLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPXXX 60
A LPI E I GETGSGK+TQ+ Q L+ GY G +IG+T+P
Sbjct: 234 AELPIFAEEMRIVEAINENLVTVVCGETGSGKTTQIPQFLYEAGYASEGELIGITEPRRV 293
Query: 61 XXXXXXXXXXQELGVRLG--EEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPY 118
Q +GV L +EV Y IR+E SE T I ++TDGVL++E+ + L Y
Sbjct: 294 AAIAMA----QRVGVELAKPDEVSYQIRYEGTRSETTNILFMTDGVLMKEMEQDVMLKKY 349
Query: 119 SVIILDEAHERSLNTDILLGLVKRLVNLR---ASKLKILITSATL--DGEKVSKFFSNC- 172
SVI++DEAHERS+ +D+L+G++ R+V LR A L+++I SATL D K F
Sbjct: 350 SVILIDEAHERSMYSDVLIGMLSRIVPLRSKTARPLRLVIMSATLRLDDFTHKKLFPLLT 409
Query: 173 P-TLNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVS 231
P + V + +PV + K P Y+ SA + IH P G +L+F+TGQ ++++L++
Sbjct: 410 PKVIKVDARQFPVSVHFEKRTPDDYIASAFRKTCRIHETLPPGAILVFVTGQHEVKQLIT 469
Query: 232 KLEDK 236
KL+ +
Sbjct: 470 KLKKR 474
Score = 324 (119.1 bits), Expect = 1.4e-66, Sum P(2) = 1.4e-66
Identities = 83/213 (38%), Positives = 114/213 (53%)
Query: 219 FMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIV 278
F G D+ K+E+ I + C LPL+ L Q RVF P R ++
Sbjct: 549 FENGDGDLSD--GKVENSIGA-PPADCEPLYCLPLYSLLSMGKQRRVFDETPAGMRLCVI 605
Query: 279 STNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPG 338
STN+AETSLT+ GV YVID G+ K+R Y+ +G+ V +IS+ +QR GRAGR G
Sbjct: 606 STNVAETSLTIPGVKYVIDGGFEKRRLYDSITGVSRFAVCRISQASGDQRAGRAGRISAG 665
Query: 339 KCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLE 398
YRLY S VY D F+ PEI VL+LKS+++ + V+ F F P + LE
Sbjct: 666 HAYRLYSSAVYQD-FVKFADPEILSKPADQLVLHLKSMNI--VKVVNFPFPSAPDEQMLE 722
Query: 399 DALKQLYLIDAIDE---NGS----ITSIGRTMA 424
A K+L + A+ E NG IT +G+T+A
Sbjct: 723 SAEKRLCRLGALSESTKNGKTEARITKLGKTLA 755
Score = 40 (19.1 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 112 NPDLSPYSVIILDEAHERSLNTDIL 136
NP+ + +++ E E S N DIL
Sbjct: 184 NPETNLDQIVVKREDDEESDNEDIL 208
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 682 (245.1 bits), Expect = 2.6e-66, P = 2.6e-66
Identities = 168/437 (38%), Positives = 239/437 (54%)
Query: 2 ANLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXX 61
A LPI QY I G+TG GKSTQ+ Q L G++ + TQP
Sbjct: 160 AALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---VACTQPRRIA 216
Query: 62 XXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
E + G +VGY IRFE S T I +LT G+LLR+I P L Y V+
Sbjct: 217 CISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLPQYEVL 276
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
I+DE HER L+ D LLG+++RL+ R LK+++ SAT++ S +FSN P + VPG+L
Sbjct: 277 IVDEVHERHLHNDFLLGVLQRLLPTRPD-LKVILMSATINISLFSSYFSNAPVVQVPGRL 335
Query: 182 YPVEILHSKER--PTSYLESALKT--------AIDIHVREPE--GDVLIFMTGQDDIEKL 229
+P+ +++ + PT+ L +ID H PE GD+L+F++G +I +
Sbjct: 336 FPITVVYQPQEAEPTTSKSEKLDPRPFLRVLESID-HKYPPEERGDLLVFLSGMAEISAV 394
Query: 230 VSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTV 289
+ + V+LPLH +L Q +VF PP R+ I+STNIAETS+T+
Sbjct: 395 LEAAQTYASHTQRW-----VVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTI 449
Query: 290 DGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVY 349
DG+ +V+D G VK+ Y+P + + L IS+ A QR GRAGRT PG C+RLY + Y
Sbjct: 450 DGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDY 509
Query: 350 HDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLID- 408
D F VPEI+R +L VL +KS+ + D F F++PP SLE A+ LYL D
Sbjct: 510 -DAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRT--FPFIEPPPPASLETAI--LYLRDQ 564
Query: 409 -AIDENGSITSIGRTMA 424
A+D + ++T IG +A
Sbjct: 565 GALDSSEALTPIGSLLA 581
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 675 (242.7 bits), Expect = 1.5e-65, P = 1.5e-65
Identities = 168/436 (38%), Positives = 241/436 (55%)
Query: 2 ANLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXX 61
A LPI QY + I G+TG GKSTQ+ Q L G++ + TQP
Sbjct: 160 AALPISQYRDRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---VACTQPRRIA 216
Query: 62 XXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
E + G +VGY IRFE S T I +LT G+LLR + P L Y V+
Sbjct: 217 CISLAKRVGLESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRHVQREPTLPQYRVL 276
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
I+DE HER L+ D LLG+++RL+ R LK+++ SAT++ S +F P + VPG+L
Sbjct: 277 IVDEVHERHLHNDFLLGVLQRLLPRRPD-LKVILMSATVNTSLFSAYFGQAPVVQVPGRL 335
Query: 182 YPVEILHSKER--PT-SYLESA-------LKTAIDI-HVREPEGDVLIFMTGQDDIEKLV 230
+P+ +++ + PT S LE + AID + E GD+L+F++G +I ++
Sbjct: 336 FPITVVYQPQEAEPTASTLEKLDPRPFIRVLEAIDSKYPPEERGDLLVFLSGLAEIGAVL 395
Query: 231 SKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVD 290
+ R G V+LPLH +L Q +VF PP R+ I+STNIAETS+T+D
Sbjct: 396 EAAQAHARR--SGRW---VVLPLHSTLSVAAQDKVFDVAPPGVRKCILSTNIAETSVTID 450
Query: 291 GVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYH 350
G+ +V+D G VK+ Y+P + + L IS+ A QR GRAGRT PG C+RLY + Y
Sbjct: 451 GIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDY- 509
Query: 351 DEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLID-- 408
D F VPEI+R +L VL +KS+ + D F F++PP + SLE A+ LYL D
Sbjct: 510 DAFAPYPVPEIRRVALDALVLQMKSMSVGDPRT--FPFIEPPPAASLETAI--LYLRDQG 565
Query: 409 AIDENGSITSIGRTMA 424
A+D + ++T IG +A
Sbjct: 566 ALDGSEALTPIGSLLA 581
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 675 (242.7 bits), Expect = 2.6e-65, P = 2.6e-65
Identities = 168/440 (38%), Positives = 238/440 (54%)
Query: 2 ANLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXX 61
A LP+ Q + I GETGSGK+TQL +I G K G+IG TQP
Sbjct: 85 ALLPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGRGKYGLIGHTQPRRLA 144
Query: 62 XXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
+E+ LG VGY +RF D+ S++T IK +TDG+LL EI ++ L+ Y I
Sbjct: 145 ARSVANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYDTI 204
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
I+DEAHERSLN D +LG +K+L+ R LK++ITSAT+D E+ SK FSN P + V G+
Sbjct: 205 IIDEAHERSLNIDFILGYLKQLLPRRPD-LKVIITSATIDPERFSKHFSNAPIIEVSGRT 263
Query: 182 YPVEILH-------SKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLE 234
YPVE+ + E LE + A+D E GD+LIFM G+ +I
Sbjct: 264 YPVEVRYRPLAGDDDSESDRDQLEGIFQ-AVDELCDEGLGDILIFMNGEREIR------- 315
Query: 235 DKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVY 294
D +L + + D I+PL+ L Q ++F P RR +++TN+AETSLTV G+ Y
Sbjct: 316 DTADALSKRNLRDTEIVPLYARLSAGEQNKIFQPHAG--RRIVLATNVAETSLTVPGIKY 373
Query: 295 VIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVY--HDE 352
VID G + +Y+ + + L + IS+ ANQR GR GRT G C RLY + E
Sbjct: 374 VIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRTEEGICIRLYSEEDFLSRPE 433
Query: 353 FLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDE 412
F D PEI R++LA +L + +L L DI F F++ P +++D ++ L + AI++
Sbjct: 434 FTD---PEILRTNLASVILQMTALGLGDIEA--FPFVEAPDKRNIQDGVRLLEELGAIND 488
Query: 413 NGSITSIGRTMAGTSFFALP 432
T +G LP
Sbjct: 489 QIKDPKKRLTESGKQLARLP 508
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 675 (242.7 bits), Expect = 2.6e-65, P = 2.6e-65
Identities = 168/440 (38%), Positives = 238/440 (54%)
Query: 2 ANLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXX 61
A LP+ Q + I GETGSGK+TQL +I G K G+IG TQP
Sbjct: 85 ALLPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGRGKYGLIGHTQPRRLA 144
Query: 62 XXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
+E+ LG VGY +RF D+ S++T IK +TDG+LL EI ++ L+ Y I
Sbjct: 145 ARSVANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYDTI 204
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
I+DEAHERSLN D +LG +K+L+ R LK++ITSAT+D E+ SK FSN P + V G+
Sbjct: 205 IIDEAHERSLNIDFILGYLKQLLPRRPD-LKVIITSATIDPERFSKHFSNAPIIEVSGRT 263
Query: 182 YPVEILH-------SKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLE 234
YPVE+ + E LE + A+D E GD+LIFM G+ +I
Sbjct: 264 YPVEVRYRPLAGDDDSESDRDQLEGIFQ-AVDELCDEGLGDILIFMNGEREIR------- 315
Query: 235 DKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVY 294
D +L + + D I+PL+ L Q ++F P RR +++TN+AETSLTV G+ Y
Sbjct: 316 DTADALSKRNLRDTEIVPLYARLSAGEQNKIFQPHAG--RRIVLATNVAETSLTVPGIKY 373
Query: 295 VIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVY--HDE 352
VID G + +Y+ + + L + IS+ ANQR GR GRT G C RLY + E
Sbjct: 374 VIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRTEEGICIRLYSEEDFLSRPE 433
Query: 353 FLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDE 412
F D PEI R++LA +L + +L L DI F F++ P +++D ++ L + AI++
Sbjct: 434 FTD---PEILRTNLASVILQMTALGLGDIEA--FPFVEAPDKRNIQDGVRLLEELGAIND 488
Query: 413 NGSITSIGRTMAGTSFFALP 432
T +G LP
Sbjct: 489 QIKDPKKRLTESGKQLARLP 508
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 667 (239.9 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 163/436 (37%), Positives = 236/436 (54%)
Query: 2 ANLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXX 61
A LPI QY I G+TG GKSTQ+ Q L G++ + TQP
Sbjct: 159 AALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---VACTQPRRIA 215
Query: 62 XXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
E + G +VGY IRFE + T I +LT G+LLR+I P L Y V+
Sbjct: 216 CISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGLLLRQIQREPSLPQYQVL 275
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
I+DE HER L+ D LLG+++RL+ R LK+++ SAT++ S +F P + VPG+L
Sbjct: 276 IVDEVHERHLHNDFLLGVLRRLLPKRPD-LKVILMSATINISLFSSYFGTAPVVQVPGRL 334
Query: 182 YPVEILHSKER--PTSYLESALKTAIDIHVRE-------PE--GDVLIFMTGQDDIEKLV 230
+P+ +++ + P + L + V E PE GD+L+F++G +I ++
Sbjct: 335 FPITVVYQPQEAEPVASKSEKLDPGPFLRVLEAIDNKYPPEERGDLLVFLSGMAEISSVL 394
Query: 231 SKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVD 290
+ V+LPLH +L Q +VF PP R+ I+STNIAETS+T+D
Sbjct: 395 EAAQTYASRTQRW-----VVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTID 449
Query: 291 GVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYH 350
G+ +V+D G VK+ Y+P + ++ L IS+ A QR GRAGRT PG C+RLY + Y
Sbjct: 450 GIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDY- 508
Query: 351 DEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLID-- 408
D F VPEI+R +L VL +KS+ + D F F++PP SLE A+ LYL D
Sbjct: 509 DAFAPYPVPEIRRVALDALVLQMKSMSVGDPRT--FPFIEPPPPASLETAI--LYLQDQG 564
Query: 409 AIDENGSITSIGRTMA 424
A+D + ++T IG +A
Sbjct: 565 ALDSSEALTPIGSLLA 580
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 667 (239.9 bits), Expect = 1.3e-64, P = 1.3e-64
Identities = 163/436 (37%), Positives = 236/436 (54%)
Query: 2 ANLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXX 61
A LPI QY I G+TG GKSTQ+ Q L G++ + TQP
Sbjct: 164 AALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---VACTQPRRIA 220
Query: 62 XXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
E + G +VGY IRFE + T I +LT G+LLR+I P L Y V+
Sbjct: 221 CISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGLLLRQIQREPSLPQYQVL 280
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
I+DE HER L+ D LLG+++RL+ R LK+++ SAT++ S +F P + VPG+L
Sbjct: 281 IVDEVHERHLHNDFLLGVLRRLLPKRPD-LKVILMSATINISLFSSYFGTAPVVQVPGRL 339
Query: 182 YPVEILHSKER--PTSYLESALKTAIDIHVRE-------PE--GDVLIFMTGQDDIEKLV 230
+P+ +++ + P + L + V E PE GD+L+F++G +I ++
Sbjct: 340 FPITVVYQPQEAEPVASKSEKLDPGPFLRVLEAIDNKYPPEERGDLLVFLSGMAEISSVL 399
Query: 231 SKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVD 290
+ V+LPLH +L Q +VF PP R+ I+STNIAETS+T+D
Sbjct: 400 EAAQTYASRTQRW-----VVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTID 454
Query: 291 GVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYH 350
G+ +V+D G VK+ Y+P + ++ L IS+ A QR GRAGRT PG C+RLY + Y
Sbjct: 455 GIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDY- 513
Query: 351 DEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLID-- 408
D F VPEI+R +L VL +KS+ + D F F++PP SLE A+ LYL D
Sbjct: 514 DAFAPYPVPEIRRVALDALVLQMKSMSVGDPRT--FPFIEPPPPASLETAI--LYLQDQG 569
Query: 409 AIDENGSITSIGRTMA 424
A+D + ++T IG +A
Sbjct: 570 ALDSSEALTPIGSLLA 585
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 666 (239.5 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 165/430 (38%), Positives = 230/430 (53%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
NLP+ E I GETGSGK+TQL +I G G IG TQP
Sbjct: 75 NLPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELGLGSRGFIGHTQPRRLAA 134
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+EL LGE VG+ +RF D + IK +TDG+LL E+ S+ L Y II
Sbjct: 135 RSVASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGILLAELTSDRYLDQYDTII 194
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
+DEAHERSLN D +LG +K+++ R LKI+ITSAT+D E+ SK F+N P + V G+ Y
Sbjct: 195 IDEAHERSLNIDFILGYLKQILKKRPD-LKIIITSATIDVERFSKHFNNAPIIEVSGRTY 253
Query: 183 PVE-----ILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKI 237
PVE ++ E +E A+D V E GD+LIFM G+ +I D
Sbjct: 254 PVETRYRPLVQDTEADLDQIEGIF-AAVDELVAEGLGDILIFMNGEREIR-------DTA 305
Query: 238 RSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVID 297
L+ + D ILPL+ L Q +VFS RR +++TN+AETSLTV G+ YVID
Sbjct: 306 EQLNRRNYRDTEILPLYARLSYGEQSKVFSSHTG--RRIVLATNVAETSLTVPGIRYVID 363
Query: 298 CGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVT 357
G + +Y+ + + L + IS+ ANQR GR GR PG C RLY +++ T
Sbjct: 364 PGTARISRYSYRTKVQRLPIEPISQASANQRQGRCGRVGPGICIRLYDEADFNNRPA-FT 422
Query: 358 VPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI-DENGSI 416
PEI R++LA +L + ++ L DI F F++PP + D L + A+ + G+I
Sbjct: 423 DPEILRTNLASVILQMLAIGLGDIAA--FPFIEPPDPRHIRDGFLLLEELQAVKQQKGNI 480
Query: 417 --TSIGRTMA 424
T +GR ++
Sbjct: 481 VLTPLGRQLS 490
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 666 (239.5 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 165/430 (38%), Positives = 230/430 (53%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
NLP+ E I GETGSGK+TQL +I G G IG TQP
Sbjct: 75 NLPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELGLGSRGFIGHTQPRRLAA 134
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+EL LGE VG+ +RF D + IK +TDG+LL E+ S+ L Y II
Sbjct: 135 RSVASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGILLAELTSDRYLDQYDTII 194
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
+DEAHERSLN D +LG +K+++ R LKI+ITSAT+D E+ SK F+N P + V G+ Y
Sbjct: 195 IDEAHERSLNIDFILGYLKQILKKRPD-LKIIITSATIDVERFSKHFNNAPIIEVSGRTY 253
Query: 183 PVE-----ILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKI 237
PVE ++ E +E A+D V E GD+LIFM G+ +I D
Sbjct: 254 PVETRYRPLVQDTEADLDQIEGIF-AAVDELVAEGLGDILIFMNGEREIR-------DTA 305
Query: 238 RSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVID 297
L+ + D ILPL+ L Q +VFS RR +++TN+AETSLTV G+ YVID
Sbjct: 306 EQLNRRNYRDTEILPLYARLSYGEQSKVFSSHTG--RRIVLATNVAETSLTVPGIRYVID 363
Query: 298 CGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVT 357
G + +Y+ + + L + IS+ ANQR GR GR PG C RLY +++ T
Sbjct: 364 PGTARISRYSYRTKVQRLPIEPISQASANQRQGRCGRVGPGICIRLYDEADFNNRPA-FT 422
Query: 358 VPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI-DENGSI 416
PEI R++LA +L + ++ L DI F F++PP + D L + A+ + G+I
Sbjct: 423 DPEILRTNLASVILQMLAIGLGDIAA--FPFIEPPDPRHIRDGFLLLEELQAVKQQKGNI 480
Query: 417 --TSIGRTMA 424
T +GR ++
Sbjct: 481 VLTPLGRQLS 490
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 664 (238.8 bits), Expect = 2.4e-64, P = 2.4e-64
Identities = 165/436 (37%), Positives = 236/436 (54%)
Query: 2 ANLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXX 61
A LPI QY I G+TG GKSTQ+ Q L G + + TQP
Sbjct: 160 AALPIAQYGHHILQMLKEHQVVVVAGDTGCGKSTQVPQYLLAAGCSH---VACTQPRRIA 216
Query: 62 XXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
E + G +VGY IRFE S T I +LT G+LLR++ P L Y V+
Sbjct: 217 CISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQMQREPSLPQYQVL 276
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
I+DE HER L+ D LLG+++RL+ R LK+++ SAT++ S +F N P + VPG+L
Sbjct: 277 IVDEVHERHLHNDFLLGVLQRLLPQRPD-LKVVLMSATINISLFSSYFGNAPVVQVPGRL 335
Query: 182 YPVEILHSKER--PTSYLESALKTAIDIHVRE-------PE--GDVLIFMTGQDDIEKLV 230
+P+ +++ + PT+ L + V E PE GD+L+F++G +I ++
Sbjct: 336 FPITVVYQPQEAEPTTSKSEKLDPRPFLRVLEAIDNKYPPEERGDLLVFLSGMAEISAVL 395
Query: 231 SKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVD 290
+ V+LPLH +L Q +VF PP R+ I+STNIAETS+T+D
Sbjct: 396 EPAQAYASHTQRW-----VVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTID 450
Query: 291 GVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYH 350
G+ +V+D G VK+ Y+P + + L IS+ A QR GRAGRT PG C+RLY + Y
Sbjct: 451 GIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDY- 509
Query: 351 DEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLID-- 408
D F VPEI+R +L VL +KS+ + D F F++PP SLE A+ LYL D
Sbjct: 510 DAFAPYPVPEIRRVALDALVLQMKSMSVGDPRT--FPFIEPPPPTSLETAI--LYLRDQG 565
Query: 409 AIDENGSITSIGRTMA 424
A+D + ++T IG +A
Sbjct: 566 ALDSSEALTPIGSLLA 581
>UNIPROTKB|B0V0F8 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR011545
Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOVERGEN:HBG039428 HGNC:HGNC:2739 OrthoDB:EOG4VHK5Q EMBL:CR759873
IPI:IPI00894081 SMR:B0V0F8 Ensembl:ENST00000450902 Uniprot:B0V0F8
Length = 669
Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
Identities = 121/274 (44%), Positives = 178/274 (64%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPXXXX 61
+LP+ + E + GETGSGK+TQ+ Q L GYT G+ I TQP
Sbjct: 398 SLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVA 457
Query: 62 XXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
+E+GV+LG EVGY+IRFED TSERT+++Y+TDG+LLRE LS PDL+ YSV+
Sbjct: 458 AMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVV 517
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
++DEAHER+L+TDIL GL+K + R +LK+L+ SAT+D + S FF + P +PG+
Sbjct: 518 MVDEAHERTLHTDILFGLIKDVARFRP-ELKVLVASATMDTARFSTFFDDAPVFRIPGRR 576
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLD 241
+PV+I ++K YLE+ + + + IHV +P GD+L+F+TGQ++IE L+D+ R L
Sbjct: 577 FPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLG 636
Query: 242 EGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRR 275
+ ++LP++ +LP +MQ R+F P PP R+
Sbjct: 637 S-KIRELLVLPIYANLPSDMQARIFQPTPPGARK 669
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 661 (237.7 bits), Expect = 4.9e-64, P = 4.9e-64
Identities = 162/434 (37%), Positives = 235/434 (54%)
Query: 2 ANLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXX 61
A LPI QY I G+TG GKSTQ+ Q L G++ + TQP
Sbjct: 162 AALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---VACTQPRRIA 218
Query: 62 XXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
E + G +VGY IRFE S T I +LT G+LLR+I P L Y V+
Sbjct: 219 CISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLPQYQVL 278
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
I+DE HER L+ D LLG+++RL+ R LK+++ SAT++ S +FS+ P + VPG+L
Sbjct: 279 IVDEVHERHLHNDFLLGVLQRLLPQRPD-LKVILMSATINISLFSSYFSHAPVVQVPGRL 337
Query: 182 YPVEILHSKERPTSYLESALKT----------AIDI-HVREPEGDVLIFMTGQDDIEKLV 230
+P+ +++ + + K AID + E GD+L+F++G +I ++
Sbjct: 338 FPITVVYQPQEADQTASKSEKLDPRPFLRVLEAIDNKYPPEERGDLLVFLSGMAEITTVL 397
Query: 231 SKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVD 290
+ SL + V+LPLH +L Q +VF P R+ I+STNIAETS+T+D
Sbjct: 398 DAAQ-AYASLTQRW----VVLPLHSALSVSDQDKVFDVAPAGVRKCILSTNIAETSVTID 452
Query: 291 GVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYH 350
G+ +V+D G VK+ Y+P + + L IS+ A QR GRAGRT PG CYRLY + Y
Sbjct: 453 GIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRLYAESDY- 511
Query: 351 DEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI 410
D F VPEI+R +L VL +KS+ + D F F++PP S+E A+ L A+
Sbjct: 512 DAFAPYPVPEIRRVALDALVLQMKSMSVGDPRT--FPFIEPPPPASVETAILYLQEQGAL 569
Query: 411 DENGSITSIGRTMA 424
D + ++T IG +A
Sbjct: 570 DSSEALTPIGSLLA 583
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 662 (238.1 bits), Expect = 6.3e-64, P = 6.3e-64
Identities = 167/435 (38%), Positives = 241/435 (55%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
NLP+ Q ++ I GETGSGK+TQL +I G G+IG TQP
Sbjct: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+EL G +GY +RF D S+ T++K +TDG+LL EI + L Y II
Sbjct: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
+DEAHERSLN D LLG +K L+ R LKI+ITSAT+D E+ S+ F+N P + V G+ Y
Sbjct: 196 IDEAHERSLNIDFLLGYLKELLPRRPD-LKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254
Query: 183 PVEILHS---KERPTSYLES--ALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKI 237
PVE+ + +E + + A+ A+D +E GD+LIFM+G+ +I D
Sbjct: 255 PVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIR-------DTA 307
Query: 238 RSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVID 297
+L++ + ILPL+ L Q RVF + RR +++TN+AETSLTV G+ YVID
Sbjct: 308 DALNKLNLRHTEILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVID 365
Query: 298 CGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFL--- 354
G + +Y+ + + L + IS+ ANQR GR GR G C RLY D+FL
Sbjct: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE----DDFLSRP 421
Query: 355 DVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI--DE 412
+ T PEI R++LA +L + +L L DI F F++ P +++D ++ L + AI DE
Sbjct: 422 EFTDPEILRTNLASVILQMTALGLGDIAA--FPFVEAPDKRNIQDGVRLLEELGAITTDE 479
Query: 413 NGS---ITSIGRTMA 424
S +T +GR ++
Sbjct: 480 QASAYKLTPLGRQLS 494
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 406 (148.0 bits), Expect = 8.2e-64, Sum P(2) = 8.2e-64
Identities = 87/211 (41%), Positives = 129/211 (61%)
Query: 211 EPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPP 270
E G +L+F+TG D+I KL+ K+ L + S ++LPLHGS+P Q +F PP
Sbjct: 501 EGGGAILVFLTGWDEISKLLEKINMN-NFLGDSSKF--LVLPLHGSMPTVNQREIFDRPP 557
Query: 271 PNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVG 330
PN R+ +++TNIAE+S+T+D VVYV+DCG K+ Y+ + + L ISK A+QR G
Sbjct: 558 PNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACLLPSWISKASAHQRRG 617
Query: 331 RAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLD 390
RAGR + G CYRLYP +Y D F +PEI R+ L L++KSL + I L
Sbjct: 618 RAGRVQAGVCYRLYPKVIY-DAFPQYQLPEIIRTPLQELCLHIKSLQVGSIGSFLAKALQ 676
Query: 391 PPSSESLEDALKQLYLIDAIDENGSITSIGR 421
PP + ++E+A++ L I A+++ +T +GR
Sbjct: 677 PPDALAVENAIELLKTIGALNDVEELTPLGR 707
Score = 284 (105.0 bits), Expect = 8.2e-64, Sum P(2) = 8.2e-64
Identities = 65/185 (35%), Positives = 100/185 (54%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQ-ILHRHGYTKSGI---IGVTQPXX 59
LP + +E GETG GK+TQL Q IL + G I TQP
Sbjct: 228 LPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFILEEEISSLRGADCNIICTQPRR 287
Query: 60 XXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYS 119
E G +GE VGY IR E + S++T + + T GVLLR ++ +P+L+ S
Sbjct: 288 ISAISVASRISAERGESIGESVGYQIRLESKRSDQTRLLFCTTGVLLRRLIEDPNLTNVS 347
Query: 120 VIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPG 179
+++DE HER +N D LL +++ L+ R L++++ SAT++ + S +F N PT+++PG
Sbjct: 348 HLLVDEIHERGMNEDFLLIILRDLLPRRPD-LRLILMSATINADMFSTYFGNSPTMHIPG 406
Query: 180 KLYPV 184
+PV
Sbjct: 407 FTFPV 411
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 367 (134.2 bits), Expect = 1.4e-63, Sum P(2) = 1.4e-63
Identities = 72/175 (41%), Positives = 111/175 (63%)
Query: 250 ILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPS 309
+LPL+ L P Q+RVF R +V+TN+AETSLT+ G+ YV+D G VK + Y+
Sbjct: 649 VLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVKVKNYDSK 708
Query: 310 SGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGS 369
+GM S +V IS+ A+QR GRAGRT PG CYRLY S V+ + F + ++PEI + + G
Sbjct: 709 TGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFEESSLPEIMKVPVDGV 768
Query: 370 VLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
+L +KS+++ + F F PP ++ +A + L ++A+D NG +T +G+ M+
Sbjct: 769 ILLMKSMNIPKVE--NFPFPTPPEPSAIREAERCLKALEALDSNGGLTPLGKAMS 821
Score = 325 (119.5 bits), Expect = 1.4e-63, Sum P(2) = 1.4e-63
Identities = 68/151 (45%), Positives = 97/151 (64%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGY------TKSGIIGVTQ 56
+LPI+ E+ I G+TG GK+TQ+ Q L+ G+ ++SGIIG+TQ
Sbjct: 240 DLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRSGIIGITQ 299
Query: 57 PXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLS 116
P ELGVRLG+EVG+ +R++ + E + IK++TDG+LLREI ++ L
Sbjct: 300 PRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLREIQNDFLLR 359
Query: 117 PYSVIILDEAHERSLNTDILLGLVKRLVNLR 147
YSVIILDEAHERSLNTDIL+G++ R++ +R
Sbjct: 360 RYSVIILDEAHERSLNTDILIGMLTRVIKIR 390
Score = 149 (57.5 bits), Expect = 4.6e-45, Sum P(2) = 4.6e-45
Identities = 52/163 (31%), Positives = 80/163 (49%)
Query: 83 YAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKR 142
Y++ D ER+L + G+L R I + Y E ++SL + G V
Sbjct: 361 YSVIILDEAHERSLNTDILIGMLTRVIKIRQEY--Y------EEQQKSLQSG---GTVTS 409
Query: 143 LVNLRASKLKILITSATLDGEK-VS--KFFSNCPTL-NVPGKLYPVEILHSKERP-TSYL 197
+ + LK+++ SATL E VS + F N P L VP + YPV I SK+ Y+
Sbjct: 410 --ECQITPLKLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKKTEIVDYI 467
Query: 198 ESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSL 240
A K + IH + P+G +L+F+TGQ +++ L KL + L
Sbjct: 468 GEAYKKVMSIHKKLPQGGILVFVTGQREVDYLCEKLRKSSKEL 510
Score = 38 (18.4 bits), Expect = 2.0e-33, Sum P(2) = 2.0e-33
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 241 DEGSCMDAVILPLH 254
D+ SCMD P H
Sbjct: 138 DDDSCMDEPTTPEH 151
>TAIR|locus:2142459 [details] [associations]
symbol:AT5G10370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322
SMART:SM00355 SMART:SM00490 SMART:SM00647 SMART:SM00847
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12818 IPI:IPI00548793
RefSeq:NP_196599.2 UniGene:At.49004 PRIDE:F4KGU4
EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370
OMA:HQEPEIR ArrayExpress:F4KGU4 Uniprot:F4KGU4
Length = 1775
Score = 640 (230.4 bits), Expect = 3.0e-61, P = 3.0e-61
Identities = 162/422 (38%), Positives = 231/422 (54%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LPI Y I IGETGSGKSTQL Q L G S I TQP
Sbjct: 306 LPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAM 365
Query: 64 XXXXXXXQEL-GVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E G V F + + Y+TD LL+ + + LS S +I
Sbjct: 366 TLADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVI 425
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
+DEAHERSLNTD+LL L+K+L++ R L+++I SAT D +++S++F +C L V G+ +
Sbjct: 426 IDEAHERSLNTDLLLALLKKLLSRRID-LRLVIMSATADAKQLSQYFFSCGILLVNGRNF 484
Query: 183 PVEILHS----KERPT-----SYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKL 233
PVEI++S +E SY+ +K A++IH E EG +L F+T Q ++E +
Sbjct: 485 PVEIVYSPSDTEENSVVGGIASYVGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACERF 544
Query: 234 EDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVV 293
A+ LPLHG L E Q RVF P R+ I +TNIAETSLT+ GV
Sbjct: 545 ITP----------SAIALPLHGKLSFEEQFRVFQNHPGR-RKVIFATNIAETSLTIPGVK 593
Query: 294 YVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEF 353
YVID G VK+ +Y P +GM L V ++S+ A QR GRAGRT PG+CYRLY +
Sbjct: 594 YVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKNDFDSMN 653
Query: 354 LDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI-DE 412
L+ PEI+R L ++L + +L ++ N+ +F+F+D P E++ A++ L + A+ ++
Sbjct: 654 LNQE-PEIRRVHLGVALLRMLALGVN--NIAEFNFVDAPVPEAIAMAVQNLVQLGAVVEK 710
Query: 413 NG 414
NG
Sbjct: 711 NG 712
>TAIR|locus:2125211 [details] [associations]
symbol:AT4G01020 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS50157 PROSITE:PS51194 SMART:SM00184
SMART:SM00322 SMART:SM00355 SMART:SM00490 SMART:SM00647
SMART:SM00847 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 HSSP:P38398 GO:GO:0008026
EMBL:AL161491 EMBL:AL080237 KO:K12818 PIR:T10542 IPI:IPI00547897
RefSeq:NP_567206.1 UniGene:At.42970 ProteinModelPortal:P0CE10
SMR:P0CE10 PRIDE:P0CE10 EnsemblPlants:AT4G01020.1 GeneID:826439
KEGG:ath:AT4G01020 GeneFarm:1806 TAIR:At4g01020
HOGENOM:HOG000084497 PhylomeDB:P0CE10 Uniprot:P0CE10
Length = 1787
Score = 637 (229.3 bits), Expect = 6.4e-61, P = 6.4e-61
Identities = 161/422 (38%), Positives = 226/422 (53%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LPI Y I IGETGSGKSTQL Q L G S I TQP
Sbjct: 303 LPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAM 362
Query: 64 XXXXXXXQEL-GVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E G V F + + Y+TD LL+ + + LS S +I
Sbjct: 363 TLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVI 422
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
+DEAHERSLNTD+LL L+++L++ R L+++I SAT D ++S++ +C L+V G+ +
Sbjct: 423 IDEAHERSLNTDLLLALLRKLLSRRID-LRLVIMSATADANQLSQYLFDCGILHVNGRNF 481
Query: 183 PVEILHSKE---------RPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKL 233
PVEI++S R SY +K A++IH E EG +L F+T Q ++E +
Sbjct: 482 PVEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACERF 541
Query: 234 EDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVV 293
A+ LPLHG L E Q VF P R+ I +TNIAETSLT+ GV
Sbjct: 542 V----------APSAIALPLHGKLSFEEQFMVFQNYPGR-RKVIFATNIAETSLTIPGVK 590
Query: 294 YVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEF 353
YVID G VK+ +Y P +GM L V Q+S+ A QR GRAGRT PG+CYRLY T +
Sbjct: 591 YVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSKTDFDSMN 650
Query: 354 LDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI-DE 412
L+ PEI+R L ++L + +L + N+ F+F+D P E++ A++ L + A+ ++
Sbjct: 651 LNQE-PEIRRVHLGVALLRMLALGID--NIAAFEFVDAPVPEAIAMAIQNLVQLGAVVEK 707
Query: 413 NG 414
NG
Sbjct: 708 NG 709
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 359 (131.4 bits), Expect = 2.6e-60, Sum P(2) = 2.6e-60
Identities = 83/215 (38%), Positives = 122/215 (56%)
Query: 211 EPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAV-ILPLHGSLPPEMQVRVFSPP 269
EPEG +L+F+ G D I +L + L DK ++ D + + PLH + Q VF P
Sbjct: 420 EPEGAILVFLPGYDKISQLYNIL-DKPKTSKGQRWRDHMAVFPLHSLMQSGEQQAVFRRP 478
Query: 270 PPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRV 329
P R+ I+ST IAETS+T+D VVYVI+ G K Y+ + + SLD V ++K QR
Sbjct: 479 PAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDEVWVTKANTQQRR 538
Query: 330 GRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFL 389
GRAGR RPG CY L+ S D D+ PEI RS L +L LK L + D +
Sbjct: 539 GRAGRVRPGICYNLF-SRAREDRMDDIPTPEILRSKLESIILSLKLLHIDDPYRFLQTLI 597
Query: 390 DPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
+ P+ E+++ ++ L I+A+D+ G++T +G +A
Sbjct: 598 NAPNPEAIKMGVELLKRIEALDQTGTLTPLGMHLA 632
Score = 298 (110.0 bits), Expect = 2.6e-60, Sum P(2) = 2.6e-60
Identities = 71/193 (36%), Positives = 105/193 (54%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILH----RHGYTKSGIIGVTQPXX 59
LP ++Y + I +G TG GK+TQ+ QIL G S I TQP
Sbjct: 153 LPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRIICTQPRR 212
Query: 60 XXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTS-ERTLIKYLTDGVLLREILSNPDLSPY 118
E LG VGY IR E R + ER I Y T GVLL+++ S+P +
Sbjct: 213 ISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQQLQSDPLMHNL 272
Query: 119 SVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVP 178
SV+ILDE HERS+ TD+L+GL+K ++ R LK+++ SAT+ + +F+NCP +
Sbjct: 273 SVLILDEIHERSVETDLLMGLLKVILPHRPD-LKVILMSATVREQDFCDYFNNCPMFRIE 331
Query: 179 GKLYPVEILHSKE 191
G ++PV++L+ ++
Sbjct: 332 GVMFPVKMLYLED 344
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 391 (142.7 bits), Expect = 7.1e-60, Sum P(2) = 7.1e-60
Identities = 87/214 (40%), Positives = 127/214 (59%)
Query: 211 EPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPP 270
E G VL+FMTG DDI L ++LE SL G ++L HGS+ Q +F PP
Sbjct: 576 ERPGAVLVFMTGWDDINSLKNQLE--AHSL-LGDPNKVLLLACHGSMASSEQRLIFDRPP 632
Query: 271 PNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVG 330
R+ +++TN+AETS+T++ VVYVIDCG K+ Y+ + L ISK A QR G
Sbjct: 633 EGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRG 692
Query: 331 RAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLD 390
RAGR PG+CY LYP VY + F D PE+ R+ L L +KSL L I+ L
Sbjct: 693 RAGRVMPGECYHLYPRCVY-EAFADYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQ 751
Query: 391 PPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
PP + S+++A++ L +I A+D++ ++T +G+ ++
Sbjct: 752 PPEALSVQNAVEYLKIIGALDDDENLTPLGKNLS 785
Score = 265 (98.3 bits), Expect = 7.1e-60, Sum P(2) = 7.1e-60
Identities = 69/201 (34%), Positives = 99/201 (49%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQ-ILHRHGYTKSGI---IGVTQPXX 59
LP + ++ + GETG GK+TQL Q IL G I TQP
Sbjct: 299 LPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQPRR 358
Query: 60 XXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYS 119
E G ++GE VGY +R E T + + T GVLLR +L + L +
Sbjct: 359 ISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVT 418
Query: 120 VIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPG 179
+++DE HER +N D LL ++K L+ R LK+++ SATL+ E S +F P +++PG
Sbjct: 419 HVVVDEIHERGMNEDFLLIVLKDLLPRRPD-LKLILMSATLNAELFSSYFGGAPAMHIPG 477
Query: 180 KLYPVEILHSKERPTSYLESA 200
YPV H E YLE++
Sbjct: 478 FTYPVRA-HFLE---DYLETS 494
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
Identities = 135/301 (44%), Positives = 195/301 (64%)
Query: 147 RASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVE-----ILHSKERPTS-YLESA 200
R +++K+++ SATL+ +K+S+FF +C L++PG+ YPV+ +L ++ +S Y+ A
Sbjct: 149 RKTEMKVVVMSATLEVDKLSEFFGHCSVLHIPGRSYPVKEIFCNLLSPRDTGSSAYVTEA 208
Query: 201 LKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLD------EGSCMDAVILPLH 254
+K +DIH+ EPEGD+L+F+TGQ +IEK L K S+D + S +ILPL+
Sbjct: 209 VKVTLDIHLNEPEGDILVFLTGQIEIEKACDLLFKKAESIDYRYEVHDRSIEGLLILPLY 268
Query: 255 GSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYS 314
GS+ + Q R+F P P R+ +VSTNIA TSLT++GV YV+D G+VKQ +NP G+
Sbjct: 269 GSMSTDQQKRIFLPAPKGIRKCVVSTNIAATSLTIEGVRYVVDSGFVKQLNHNPRVGLDI 328
Query: 315 LDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFL-DVTVPEIQRSSLAGSVLYL 373
L+VV ISK +A QR GRAGRT GK YRLY ST + ++ + D TVPEI+R+SL +L L
Sbjct: 329 LEVVPISKSEAMQRAGRAGRTSSGKSYRLY-STEFWEQCMPDHTVPEIKRTSLTSVILTL 387
Query: 374 KSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDEN--GSITSIGRTMAGTSFFAL 431
K L + D V++F +LD P + +ALKQLY DAID G +T +G + F L
Sbjct: 388 KCLSVHD--VIRFPYLDRPEERHILEALKQLYQCDAIDRTRRGHVTRLGEFLVQ---FPL 442
Query: 432 P 432
P
Sbjct: 443 P 443
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 114/249 (45%), Positives = 160/249 (64%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LPI ++ + GETGSGKSTQL + L+ G + G IGVTQP
Sbjct: 1 LPIRRHRRALVRAVSERPFLIVTGETGSGKSTQLPKYLYEAGLAQHGAIGVTQPRRVATI 60
Query: 64 XXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
+E+G LG VGY +RF+D +SE T IKY+TDG LLR IL++P LS YS+IIL
Sbjct: 61 SVAQRVAEEMGCALGSVVGYQVRFDDCSSEETAIKYMTDGCLLRHILADPLLSKYSIIIL 120
Query: 124 DEAHERSLNTDILLGLVKRLV--NL---RASKLKILITSATLDGEKVSKFFSNCPTLNVP 178
DEAHERSL+TDIL GL+K+L N R +++K+++ SATL+ +K+S+FF +C L++P
Sbjct: 121 DEAHERSLSTDILFGLLKKLFLQNKPPGRKTEMKVVVMSATLEVDKLSEFFGHCSVLHIP 180
Query: 179 GKLYPVE-----ILHSKERPTS-YLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSK 232
G+ YPV+ +L ++ +S Y+ A+K +DIH+ EPEGD+L+F+TGQ +IEK
Sbjct: 181 GRSYPVKEIFCNLLSPRDTGSSAYVTEAVKVTLDIHLNEPEGDILVFLTGQIEIEKACDL 240
Query: 233 LEDKIRSLD 241
L K S+D
Sbjct: 241 LFKKAESID 249
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 378 (138.1 bits), Expect = 1.0e-58, Sum P(2) = 1.0e-58
Identities = 87/214 (40%), Positives = 125/214 (58%)
Query: 211 EPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPP 270
E G +LIF+TG DDI L KL+ I + G+ ++L HGS+ Q +F P
Sbjct: 496 EGPGGILIFLTGWDDISSLKEKLQ--IHPIF-GNPDLVMLLACHGSMETFEQRLIFEEPA 552
Query: 271 PNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVG 330
R+ +++TNIAETS+T++ V +VIDCG K+ Y+ + L ISKV A QR G
Sbjct: 553 SGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRG 612
Query: 331 RAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLD 390
RAGR RPG+CY LYP VY D F + +PEI R+ L L +KSL+L I+ L
Sbjct: 613 RAGRVRPGQCYHLYPKCVY-DAFAEYQLPEILRTPLHSLCLQIKSLNLGSISEFLSRALQ 671
Query: 391 PPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
P +++ A+ L +I A+DEN +T++GR ++
Sbjct: 672 SPELLAVQKAIAFLKIIGALDENEDLTTLGRYLS 705
Score = 266 (98.7 bits), Expect = 1.0e-58, Sum P(2) = 1.0e-58
Identities = 64/186 (34%), Positives = 93/186 (50%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQ-ILHRHGYTKSGIIG---VTQPX 58
+LP + ++ GETG GK+TQ+ Q IL G TQP
Sbjct: 219 SLPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFSSIICTQPR 278
Query: 59 XXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPY 118
E G +LGE VGY +R E T + + T G+LLR +L + +L
Sbjct: 279 RISAMSVSERVAYERGEQLGESVGYKVRLEGVKGRDTRLLFCTTGILLRRLLVDRNLRGV 338
Query: 119 SVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVP 178
+ +I+DE HER +N D LL ++K L++ R S+LK+++ SATLD E S +F + +P
Sbjct: 339 THVIVDEIHERGMNEDFLLIILKDLLS-RRSELKLILMSATLDAELFSSYFGGAGVIYIP 397
Query: 179 GKLYPV 184
G YPV
Sbjct: 398 GFTYPV 403
Score = 43 (20.2 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 326 NQRVGRAGRTRPGKCYRLYPS--TVYHDE 352
N A TR CY +YP +V H+E
Sbjct: 827 NSEGNDANLTRAVICYGMYPGICSVVHNE 855
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 613 (220.8 bits), Expect = 1.3e-58, P = 1.3e-58
Identities = 153/437 (35%), Positives = 238/437 (54%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXX 63
LPI + I GETGSGK+TQ+ +I G G+IG TQP
Sbjct: 99 LPISENAAQISAAIDANQVVIIAGETGSGKTTQIPKICLELGRGVDGLIGHTQPRRIAAR 158
Query: 64 XXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
+ELG +LGE+VGY +RF D+ SE++ IK +TDG+LL E+ + L Y II+
Sbjct: 159 TVANRIAEELGTKLGEQVGYKVRFNDQVSEQSYIKLMTDGILLAEMQRDRLLLKYDTIII 218
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSN-----CPTLNVP 178
DEAHERSLN D +LG +K+++ ++ LK++ITSAT+D ++ +K FS+ P + V
Sbjct: 219 DEAHERSLNIDFILGYLKQIL-IKRPDLKLIITSATIDPQRFAKHFSSKNGLPAPIIEVS 277
Query: 179 GKLYPVEI----LHSK-------ERPTSY-LESALKTAIDIHVREPEGDVLIFMTGQDDI 226
G+ +PVE+ L+ + + P + S + +A+D GD+L+F+ G+ +I
Sbjct: 278 GRTFPVEMRYRPLNDRAVIDDDDQSPQEVDIISGILSAVDELSDCGNGDILVFLNGEREI 337
Query: 227 EKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETS 286
D +L + + +LPL+ L Q ++F P + R +++TN+AETS
Sbjct: 338 R-------DTAAALVKANLRHTNVLPLYARLTVSEQNQIFKPH--SGRNIVLATNVAETS 388
Query: 287 LTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPS 346
LTV G+ YVID G + +Y+ + + L + +S+ ANQR GR GR G C RLY
Sbjct: 389 LTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRSGRCGRVSEGICIRLYSE 448
Query: 347 TVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYL 406
Y + T PEI R++LA +L + +LDL DI F F++ P + ++ D ++ L
Sbjct: 449 DDYKSR-AEFTDPEILRTNLATVILQMHALDLGDI--ANFPFVEAPDNRNITDGVRLLEE 505
Query: 407 IDAID--ENGSITSIGR 421
I A++ EN + G+
Sbjct: 506 IAAVESIENADKNAKGK 522
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 372 (136.0 bits), Expect = 3.4e-58, Sum P(3) = 3.4e-58
Identities = 88/232 (37%), Positives = 131/232 (56%)
Query: 197 LESALKTAID-IHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHG 255
+ES LK ++ H EG +LIF+ G +I+ + L D +L +++PLH
Sbjct: 735 IESVLKYIVEGSHDWPREGTILIFLPGFGEIQSVHDSLLDN--ALFSPRAGKFILVPLHS 792
Query: 256 SLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSL 315
+L E Q VF PP R+ ++STNIAETS+T+D V+V+DCG +K++ ++ + M SL
Sbjct: 793 ALSGEDQALVFKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESL 852
Query: 316 DVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKS 375
D+V +S+ A QR GRAGR PG C LY S Y L VPEIQR L VL +K+
Sbjct: 853 DLVWVSRANAKQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQIVLRIKT 912
Query: 376 LD-LSDINVLK--FDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
L + N L + L+ P+ +S+ AL +L + A+D +T +G +A
Sbjct: 913 LQTFASRNTLSVLLETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHLA 964
Score = 256 (95.2 bits), Expect = 3.4e-58, Sum P(3) = 3.4e-58
Identities = 62/172 (36%), Positives = 94/172 (54%)
Query: 27 GETGSGKSTQLSQILHRHGY-------TKSGIIGV----TQPXXXXXXXXXXXXXQELGV 75
GETG GKSTQ+ Q + + + K + V TQP E
Sbjct: 476 GETGCGKSTQVPQFILDNWFFRALQLPAKENLPHVEIICTQPRRLSAIGVAERVAAERLD 535
Query: 76 RLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDI 135
R+G+ VGY IR E++ S+ T + + T G+LLR + S+P L + +I+DE HERS +D
Sbjct: 536 RIGQLVGYQIRLENKVSQSTRLSFCTTGILLRRLASDPLLGSVTHVIVDEVHERSEESDF 595
Query: 136 LLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEIL 187
LL ++K L+ R LK+++ SATL+ S +F P L++PG+ +PV+ L
Sbjct: 596 LLLILKNLLRERKD-LKVILMSATLNAALFSDYFGGAPVLDIPGRTFPVQQL 646
Score = 38 (18.4 bits), Expect = 3.4e-58, Sum P(3) = 3.4e-58
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 178 PGKLYPVEILHSKERPTSYLESALKTAIDIHVREP 212
PGK E L E Y E + T I++ EP
Sbjct: 693 PGKKIKDEKLTLAETYQRYAEYSKPTCKSIYLMEP 727
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 346 (126.9 bits), Expect = 8.2e-57, Sum P(2) = 8.2e-57
Identities = 78/218 (35%), Positives = 124/218 (56%)
Query: 207 IHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVF 266
I + E +G +L+F+ G D+I S L D + S +I+PLH +P Q +VF
Sbjct: 396 IVLEEEDGAILVFLPGWDNI----STLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVF 451
Query: 267 SPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQAN 326
PP R+ +++TNIAETS+T+D VVYVID G +K+ ++ + + ++ +SK A
Sbjct: 452 KRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAK 511
Query: 327 QRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKF 386
QR GRAGR +PG CY LY + + D +PEI R+ L L +K L L I
Sbjct: 512 QRKGRAGRVQPGHCYHLY-NGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLS 570
Query: 387 DFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
+DPPS+E++ +++ L ++A+D+ +T +G +A
Sbjct: 571 RLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLA 608
Score = 275 (101.9 bits), Expect = 8.2e-57, Sum P(2) = 8.2e-57
Identities = 66/165 (40%), Positives = 95/165 (57%)
Query: 27 GETGSGKSTQLSQ-ILHRH---GYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGE--E 80
GETG GK+TQ++Q IL + G + I TQP E G
Sbjct: 144 GETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGSGNS 203
Query: 81 VGYAIRFEDRTSERT-LIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGL 139
GY IR + R + I Y T G++L+ + S+P LS S I+LDE HER+L +D+L+ +
Sbjct: 204 TGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTV 263
Query: 140 VKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPV 184
VK L+N R S LK+++ SATL+ EK S++F NCP +++PG +PV
Sbjct: 264 VKDLLNFR-SDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV 307
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 351 (128.6 bits), Expect = 9.9e-57, Sum P(2) = 9.9e-57
Identities = 86/231 (37%), Positives = 129/231 (55%)
Query: 197 LESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGS 256
+ES L+ +D P G VL+F+ G +I++L +L+ R + V+ PLH S
Sbjct: 874 VESLLEWIVDGDHSYPPGAVLVFLPGLAEIKQLYEQLQSN-RMFNNRRTNRCVVYPLHSS 932
Query: 257 LPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLD 316
L E Q VF+ P + I+STNIAETS+T+D VVYVID G +K+++Y+ S M SL+
Sbjct: 933 LSNEEQQAVFTRPQNGVTKIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMESLE 992
Query: 317 VVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSL 376
V +S+ A QR GRAGR G C+ L+ S + +PEIQR L L +K L
Sbjct: 993 DVWVSRANALQRKGRAGRVASGVCFHLFTSHRFEHHLSQQQLPEIQRVPLEQLCLRVKVL 1052
Query: 377 DLSDINVLKFDF---LDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
++ L F ++PP+ SLE A ++L + A+ + S+T +G +A
Sbjct: 1053 EVFAERPLDSVFSQLIEPPTEGSLEAAKQRLCALGALTDEESLTPLGWHLA 1103
Score = 278 (102.9 bits), Expect = 9.9e-57, Sum P(2) = 9.9e-57
Identities = 65/188 (34%), Positives = 101/188 (53%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG----IIGV--TQP 57
LP Q E I G TG GK+TQ+ Q + + ++G + + TQP
Sbjct: 582 LPAWQKREAILECLVKNQVLVISGMTGCGKTTQIPQFI-LDNFLQTGRPDRVANIICTQP 640
Query: 58 XXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSP 117
QE LG GY IR E S T + + T GVLLR + +P+LS
Sbjct: 641 RRISAIAVATRVAQERAEALGHSTGYQIRLETVRSSITRLMFCTTGVLLRRLEGDPELSG 700
Query: 118 YSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNV 177
+ +I+DE HER+ +D LL ++K L+ ++ + LK+++ SATL+ E S++F+NCP +++
Sbjct: 701 VTHVIVDEVHERTEESDFLLLVLKDLI-VKRTDLKVIMMSATLNAELFSQYFNNCPCIHI 759
Query: 178 PGKLYPVE 185
PG+ +PVE
Sbjct: 760 PGRTFPVE 767
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 323 (118.8 bits), Expect = 1.5e-56, Sum P(2) = 1.5e-56
Identities = 82/216 (37%), Positives = 114/216 (52%)
Query: 210 REPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPP 269
R EG VLIF+ G I++L L R E ++ LH L + Q F P
Sbjct: 863 RNIEGAVLIFLPGLAHIQQLYDLLSSDRRFYSERY----QVIALHSVLSTQDQAAAFMFP 918
Query: 270 PPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRV 329
PP R+ +++TNIAET +T+ VV+VID G K+ +Y+ SS M SL +SK A QR
Sbjct: 919 PPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQ 978
Query: 330 GRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFL 389
GRAGR R G C+RLY + + FLD +VPEI R L L++ DL L
Sbjct: 979 GRAGRVRDGFCFRLYTRERF-EGFLDYSVPEILRVPLEELCLHIMKCDLGSPEDFLSKAL 1037
Query: 390 DPPSSESLEDALKQLYLIDAIDENG-SITSIGRTMA 424
DPP + + +A+ L I A + N +T +G+ +A
Sbjct: 1038 DPPQLQVISNAMNLLRKIGACEPNEPKLTPLGQHLA 1073
Score = 304 (112.1 bits), Expect = 1.5e-56, Sum P(2) = 1.5e-56
Identities = 72/199 (36%), Positives = 107/199 (53%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQ------ILHRHGYTKSGIIGVTQP 57
LP+ ++ ++I GETGSGKSTQ+ +L G K I+ TQP
Sbjct: 571 LPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLDECGARKCNIV-CTQP 629
Query: 58 XXXXXXXXXXXXXQELGVRLGEE-----VGYAIRFEDRTSERTLIKYLTDGVLLREILSN 112
+ELG G GY IR E R SE T + Y T GVLLR++ +
Sbjct: 630 RRISAVSLATRVCEELGCESGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQED 689
Query: 113 PDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNC 172
L+ S +I+DE HERS+ +D LL ++K ++ R S L +++ SAT+D +K S +F++C
Sbjct: 690 GLLADVSHVIVDEVHERSVQSDFLLVILKEILQKR-SDLHLILMSATVDSDKFSTYFTHC 748
Query: 173 PTLNVPGKLYPVEILHSKE 191
P L + G+ YPVE+ H ++
Sbjct: 749 PILRISGRSYPVEVFHLED 767
Score = 39 (18.8 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 379 SDINVLKFDFLDPPSSESLEDALKQLY-LIDAIDENGSITSIGR 421
S+I+ + +FL+ S +LED ++L L+ A + S + GR
Sbjct: 1155 SEISYCQRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSPSWEGR 1198
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 346 (126.9 bits), Expect = 2.2e-56, Sum P(2) = 2.2e-56
Identities = 78/218 (35%), Positives = 124/218 (56%)
Query: 207 IHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVF 266
I + E +G +L+F+ G D+I S L D + S +I+PLH +P Q +VF
Sbjct: 482 IVLEEEDGAILVFLPGWDNI----STLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVF 537
Query: 267 SPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQAN 326
PP R+ +++TNIAETS+T+D VVYVID G +K+ ++ + + ++ +SK A
Sbjct: 538 KRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAK 597
Query: 327 QRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKF 386
QR GRAGR +PG CY LY + + D +PEI R+ L L +K L L I
Sbjct: 598 QRKGRAGRVQPGHCYHLY-NGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLS 656
Query: 387 DFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
+DPPS+E++ +++ L ++A+D+ +T +G +A
Sbjct: 657 RLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLA 694
Score = 275 (101.9 bits), Expect = 2.2e-56, Sum P(2) = 2.2e-56
Identities = 66/165 (40%), Positives = 95/165 (57%)
Query: 27 GETGSGKSTQLSQ-ILHRH---GYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGE--E 80
GETG GK+TQ++Q IL + G + I TQP E G
Sbjct: 230 GETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGSGNS 289
Query: 81 VGYAIRFEDRTSERT-LIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGL 139
GY IR + R + I Y T G++L+ + S+P LS S I+LDE HER+L +D+L+ +
Sbjct: 290 TGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTV 349
Query: 140 VKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPV 184
VK L+N R S LK+++ SATL+ EK S++F NCP +++PG +PV
Sbjct: 350 VKDLLNFR-SDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV 393
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 352 (129.0 bits), Expect = 4.5e-56, Sum P(2) = 4.5e-56
Identities = 81/219 (36%), Positives = 124/219 (56%)
Query: 207 IHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVF 266
I + E +G +L+F+ G D+I S L D + S +I+PLH +P Q +VF
Sbjct: 484 IVLEEEDGAILVFLPGWDNI----STLHDLLMSQVMFKSDKFIIIPLHSLMPTVNQTQVF 539
Query: 267 SPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQAN 326
PP R+ +++TNIAETS+T+D VVYVID G +K+ ++ + + ++ +SK A
Sbjct: 540 KRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAK 599
Query: 327 QRVGRAGRTRPGKCYRLYPSTVYHDEFLD-VTVPEIQRSSLAGSVLYLKSLDLSDINVLK 385
QR GRAGR +PG CY LY S LD +PEI R+ L L +K L L I
Sbjct: 600 QRKGRAGRVQPGHCYHLYNSL--RASLLDDYQLPEILRTPLEELCLQIKILRLGGIAHFL 657
Query: 386 FDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
+DPPS+E++ ++K L ++A+D+ +T +G +A
Sbjct: 658 SRLMDPPSNEAVLLSIKHLMELNALDKQEELTPLGVHLA 696
Score = 266 (98.7 bits), Expect = 4.5e-56, Sum P(2) = 4.5e-56
Identities = 64/165 (38%), Positives = 94/165 (56%)
Query: 27 GETGSGKSTQLSQ-ILHRH---GYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGE--E 80
GETG GK+TQ++Q IL + G + I TQP E G
Sbjct: 232 GETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNS 291
Query: 81 VGYAIRFEDRTSERT-LIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGL 139
GY IR + R + I Y T G++L+ + S+P LS S I+LDE HER+L +D+L+ +
Sbjct: 292 TGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPHLSSVSHIVLDEIHERNLQSDVLMTV 351
Query: 140 VKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPV 184
VK L++ R LK+++ SATL+ EK S++F NCP +++PG +PV
Sbjct: 352 VKDLLSYRPD-LKVVLMSATLNAEKFSEYFGNCPMIHIPGFTFPV 395
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 350 (128.3 bits), Expect = 5.1e-56, Sum P(2) = 5.1e-56
Identities = 81/209 (38%), Positives = 119/209 (56%)
Query: 213 EGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPN 272
+G +L+F+ G DDI K +L + D D I+ LH +P Q +VF+ PPP
Sbjct: 551 DGAILVFLPGWDDINKTRQRLLENPFFADSAK-FD--IICLHSMVPAGEQKKVFNRPPPG 607
Query: 273 CRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRA 332
CR+ +++TNIAE+++T+D VVYVID G +K++ Y+P + + +L +SK A QR GRA
Sbjct: 608 CRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQRQGRA 667
Query: 333 GRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLS-DINVLKFDFLDP 391
GR +PG CY LY S + D VPEI+R + L +K LD + N LDP
Sbjct: 668 GRCQPGICYHLY-SRLRAASMPDFKVPEIKRMPVEELCLQVKILDPNCKTNDFLQKLLDP 726
Query: 392 PSSESLEDALKQLYLIDAIDENGSITSIG 420
P +S+ +AL L I A+ +T +G
Sbjct: 727 PVDQSIANALSILQDIGALTPQEELTELG 755
Score = 271 (100.5 bits), Expect = 5.1e-56, Sum P(2) = 5.1e-56
Identities = 66/214 (30%), Positives = 109/214 (50%)
Query: 2 ANLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYT---KSGIIGVTQPX 58
+ LPI +++ I GETG GK+TQ+ Q L H ++ ++ I TQP
Sbjct: 185 SKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETCKIVCTQPR 244
Query: 59 XXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPY 118
E G +GE +GY +R + + + + + T+G+LLR ++ +S
Sbjct: 245 RISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLVGKGSVSSV 304
Query: 119 SVI---ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTL 175
S I I+DE HER +D +L +++ L+ L++++ SATLD E+ S +F CP +
Sbjct: 305 SDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPH-LRLILMSATLDAERFSGYFGGCPVV 363
Query: 176 NVPGKLYPVEILHSKERPTSYLESALKTAIDIHV 209
VPG YPV L+ ++ + S LK+ D H+
Sbjct: 364 RVPGFTYPVRTLYLED-----VLSILKSGGDNHL 392
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 318 (117.0 bits), Expect = 5.2e-56, Sum P(2) = 5.2e-56
Identities = 77/206 (37%), Positives = 111/206 (53%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQ-----LSQILHRHGYTKSGIIGVTQPX 58
LP+ ++ +I GETGSGKSTQ L +L G K I+ TQP
Sbjct: 574 LPVFKHRHSIVETLKKHRVVVVAGETGSGKSTQVPHFLLEDLLLDEGTRKCNIV-CTQPR 632
Query: 59 XXXXXXXXXXXXQELGVRLGEE-----VGYAIRFEDRTSERTLIKYLTDGVLLREILSNP 113
+ELG G GY IR E RT E T + Y T GVLLR++ +
Sbjct: 633 RISAVSLATRVCEELGCESGPGGKNSLCGYQIRMESRTGEATRLLYCTTGVLLRKLQEDG 692
Query: 114 DLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCP 173
LS S +I+DE HERS+++D LL ++K +++ R S L +++ SAT+D EK S +F++CP
Sbjct: 693 LLSSISHVIVDEVHERSVHSDFLLVILKEILHKR-SDLHLILMSATVDSEKFSSYFAHCP 751
Query: 174 TLNVPGKLYPVEILHSKE--RPTSYL 197
L + G+ YPVE+ H ++ T Y+
Sbjct: 752 ILRISGRSYPVEVFHVEDVIEATGYV 777
Score = 304 (112.1 bits), Expect = 5.2e-56, Sum P(2) = 5.2e-56
Identities = 77/217 (35%), Positives = 117/217 (53%)
Query: 210 REPEGDVLIFMTGQDDIEKLVSKLE-DKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSP 268
+ EG VLIF+ G I++L + D+ SL C ++ LH L + Q F+
Sbjct: 865 KNTEGAVLIFLPGLAHIQQLYDLISTDRRFSL----CDRHRLIALHSVLSTQDQAAAFTV 920
Query: 269 PPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQR 328
PP R+ +++TNIAET +T+ VV+VID G K+ +Y+ SS M SL+ +SK A QR
Sbjct: 921 PPLGVRKIVLATNIAETGITIPDVVFVIDSGRTKENRYHESSQMSSLEETFVSKASALQR 980
Query: 329 VGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDF 388
GRAGR R G C+R+Y + + F++ +VPEI R L L++ +L
Sbjct: 981 QGRAGRVRDGFCFRMYTRDRF-ESFMEYSVPEILRVPLEELCLHIMKCNLGSPEDFLSRA 1039
Query: 389 LDPPSSESLEDALKQLYLIDAIDENG-SITSIGRTMA 424
LDPP + + +A+ L I A N +T +G+ +A
Sbjct: 1040 LDPPQPQVIGNAMNLLRKIGACQLNEPKLTPLGQHLA 1076
Score = 38 (18.4 bits), Expect = 4.5e-28, Sum P(2) = 4.5e-28
Identities = 5/13 (38%), Positives = 11/13 (84%)
Query: 368 GSVLYLKSLDLSD 380
G ++Y KS+D+++
Sbjct: 1231 GKIMYTKSVDITE 1243
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 316 (116.3 bits), Expect = 6.6e-56, Sum P(2) = 6.6e-56
Identities = 79/216 (36%), Positives = 116/216 (53%)
Query: 210 REPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPP 269
R EG VLIF+ G I++L L R E ++ LH L + Q F+ P
Sbjct: 861 RNIEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERY----KVIALHSILSTQDQAAAFTLP 916
Query: 270 PPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRV 329
PP R+ +++TNIAET +T+ VV+VID G K+ +Y+ SS M SL +SK A QR
Sbjct: 917 PPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQ 976
Query: 330 GRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFL 389
GRAGR R G C+R+Y + + F+D +VPEI R L L++ +L L
Sbjct: 977 GRAGRVRDGFCFRMYTRERF-EGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKAL 1035
Query: 390 DPPSSESLEDALKQLYLIDAIDENG-SITSIGRTMA 424
DPP + + +A+ L I A + N ++T +G+ +A
Sbjct: 1036 DPPQLQVISNAMNLLRKIGACELNEPTLTPLGQHLA 1071
Score = 305 (112.4 bits), Expect = 6.6e-56, Sum P(2) = 6.6e-56
Identities = 73/199 (36%), Positives = 107/199 (53%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQ------ILHRHGYTKSGIIGVTQP 57
LP+ ++ +I GETGSGKSTQ+ +L+ G +K I+ TQP
Sbjct: 569 LPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCNIV-CTQP 627
Query: 58 XXXXXXXXXXXXXQELGVRLGEE-----VGYAIRFEDRTSERTLIKYLTDGVLLREILSN 112
ELG G GY IR E R SE T + Y T GVLLR++ +
Sbjct: 628 RRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQED 687
Query: 113 PDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNC 172
L+ S +I+DE HERS+ +D LL ++K ++ R S L +++ SAT+D EK S +F++C
Sbjct: 688 GLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKR-SDLHLILMSATVDSEKFSTYFTHC 746
Query: 173 PTLNVPGKLYPVEILHSKE 191
P L + G+ YPVE+ H ++
Sbjct: 747 PILRISGRSYPVEVFHLED 765
Score = 42 (19.8 bits), Expect = 4.0e-27, Sum P(2) = 4.0e-27
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 379 SDINVLKFDFLDPPSSESLEDALKQLY-LIDAIDENGSITS 418
S+I + +FL+ S +LED ++L L+ A + S TS
Sbjct: 1153 SEIAYCRRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSTTS 1193
Score = 37 (18.1 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 5/13 (38%), Positives = 11/13 (84%)
Query: 368 GSVLYLKSLDLSD 380
G ++Y KS+D+++
Sbjct: 1226 GKIIYTKSVDVTE 1238
>UNIPROTKB|J9P6V4 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437
Ensembl:ENSCAFT00000043416 Uniprot:J9P6V4
Length = 1369
Score = 316 (116.3 bits), Expect = 6.7e-56, Sum P(2) = 6.7e-56
Identities = 79/216 (36%), Positives = 116/216 (53%)
Query: 210 REPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPP 269
R EG VLIF+ G I++L L R E ++ LH L + Q F+ P
Sbjct: 864 RNIEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERY----KVIALHSILSTQDQAAAFTLP 919
Query: 270 PPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRV 329
PP R+ +++TNIAET +T+ VV+VID G K+ +Y+ SS M SL +SK A QR
Sbjct: 920 PPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQ 979
Query: 330 GRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFL 389
GRAGR R G C+R+Y + + F+D +VPEI R L L++ +L L
Sbjct: 980 GRAGRVRDGFCFRMYTRERF-EGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKAL 1038
Query: 390 DPPSSESLEDALKQLYLIDAIDENG-SITSIGRTMA 424
DPP + + +A+ L I A + N ++T +G+ +A
Sbjct: 1039 DPPQLQVISNAMNLLRKIGACELNEPTLTPLGQHLA 1074
Score = 305 (112.4 bits), Expect = 6.7e-56, Sum P(2) = 6.7e-56
Identities = 73/199 (36%), Positives = 107/199 (53%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQ------ILHRHGYTKSGIIGVTQP 57
LP+ ++ +I GETGSGKSTQ+ +L+ G +K I+ TQP
Sbjct: 569 LPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCNIV-CTQP 627
Query: 58 XXXXXXXXXXXXXQELGVRLGEE-----VGYAIRFEDRTSERTLIKYLTDGVLLREILSN 112
ELG G GY IR E R SE T + Y T GVLLR++ +
Sbjct: 628 RRISAVSLATRVCDELGCENGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQED 687
Query: 113 PDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNC 172
L+ S +I+DE HERS+ +D LL ++K ++ R S L +++ SAT+D EK S +F++C
Sbjct: 688 GLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKR-SDLHLILMSATVDSEKFSTYFTHC 746
Query: 173 PTLNVPGKLYPVEILHSKE 191
P L + G+ YPVE+ H ++
Sbjct: 747 PILRISGRSYPVEVFHLED 765
Score = 42 (19.8 bits), Expect = 4.0e-27, Sum P(2) = 4.0e-27
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 379 SDINVLKFDFLDPPSSESLEDALKQLY-LIDAIDENGSITS 418
S+I + +FL+ S +LED ++L L+ A + S TS
Sbjct: 1156 SEIAYCRRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSTTS 1196
Score = 37 (18.1 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 5/13 (38%), Positives = 11/13 (84%)
Query: 368 GSVLYLKSLDLSD 380
G ++Y KS+D+++
Sbjct: 1229 GKIIYTKSVDVTE 1241
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 348 (127.6 bits), Expect = 9.1e-56, Sum P(2) = 9.1e-56
Identities = 79/218 (36%), Positives = 122/218 (55%)
Query: 207 IHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVF 266
I + E +G +L+F+ G D+I S L D + S +I+PLH +P Q +VF
Sbjct: 474 IVLEEEDGAILVFLPGWDNI----STLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQVF 529
Query: 267 SPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQAN 326
PP R+ +++TNIAETS+T+D VVYVID G +K+ ++ + + ++ +SK A
Sbjct: 530 KKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAK 589
Query: 327 QRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKF 386
QR GRAGR +PG CY LY + + D +PEI R+ L L +K L L I
Sbjct: 590 QRKGRAGRVQPGHCYHLY-NGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLS 648
Query: 387 DFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
+DPPS E++ ++K L + A+D+ +T +G +A
Sbjct: 649 RLMDPPSDEAVVLSIKHLMELSALDKQEELTPLGVHLA 686
Score = 267 (99.0 bits), Expect = 9.1e-56, Sum P(2) = 9.1e-56
Identities = 63/166 (37%), Positives = 94/166 (56%)
Query: 27 GETGSGKSTQLSQILHRHGYTKSGI-----IGVTQPXXXXXXXXXXXXXQELGVRLGE-- 79
GETG GK+TQ++Q + Y + GI I TQP E G
Sbjct: 222 GETGCGKTTQVTQFI-LDNYIERGIGSACRIVCTQPRRISAISVAERVAAERAESCGNGN 280
Query: 80 EVGYAIRFEDRTSERT-LIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLG 138
GY IR + R + I Y T G++L+ + S+ LS S I+LDE HER+L +D+L+
Sbjct: 281 STGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMT 340
Query: 139 LVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPV 184
++K L++ R S LK+++ SATL+ EK S++F NCP +++PG +PV
Sbjct: 341 VIKDLLHFR-SDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV 385
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 359 (131.4 bits), Expect = 1.2e-55, Sum P(2) = 1.2e-55
Identities = 85/231 (36%), Positives = 131/231 (56%)
Query: 197 LESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGS 256
+E+ L+ +D P G VLIF+ G +I+ L +L+ + S V+ PLH S
Sbjct: 824 IEALLEWIVDGKHSYPPGAVLIFLPGLAEIKMLYEQLQSNALFNNRHS-KRCVVYPLHSS 882
Query: 257 LPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLD 316
L E Q VF PP + I+STNIAETS+T+D VVYVID G +K+++Y+PS GM SL+
Sbjct: 883 LSSEEQQSVFLRPPAGVIKIIISTNIAETSVTIDDVVYVIDSGKMKEKRYDPSKGMESLE 942
Query: 317 VVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSL 376
+S+ A QR GRAGR G C+ L+ S Y+ + + +PEIQR L L +K L
Sbjct: 943 DTFVSRANALQRKGRAGRVASGVCFHLFSSHHYNHQLIKQQLPEIQRVPLEQLCLRIKIL 1002
Query: 377 DL---SDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
++ ++ + ++PP +ESL + +L + A+ + +T +G +A
Sbjct: 1003 EMFSAQSLHSVLSRLIEPPRTESLRASKLRLQDLGALTADEKLTPLGYHLA 1053
Score = 259 (96.2 bits), Expect = 1.2e-55, Sum P(2) = 1.2e-55
Identities = 64/186 (34%), Positives = 95/186 (51%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKS--GIIGV--TQPXX 59
LP Q ETI G TG GK+TQ+ Q + S + + TQP
Sbjct: 537 LPAWQERETILDLLTSHQVLVVSGMTGCGKTTQIPQFILDASLQGSPNAVANIICTQPRR 596
Query: 60 XXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYS 119
+E R+G VGY IR E S T + Y T GVLLR + + L +
Sbjct: 597 ISAISVAERVAKERTERVGVTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDLTLQGIT 656
Query: 120 VIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPG 179
+I+DE HER+ +D LL LV + + ++ L+I++ SATL+ E S++F +CP +N+PG
Sbjct: 657 HVIVDEVHERTEESDFLL-LVLKDIMVQRPDLRIILMSATLNAELFSQYFHSCPIINIPG 715
Query: 180 KLYPVE 185
+ +PV+
Sbjct: 716 RTFPVD 721
>TIGR_CMR|GSU_1838 [details] [associations]
symbol:GSU_1838 "ATP-dependent helicase HrpB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004386 "helicase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI InterPro:IPR010225 InterPro:IPR013689
Pfam:PF08482 PIRSF:PIRSF005496 TIGRFAMs:TIGR01970
HOGENOM:HOG000244610 RefSeq:NP_952888.1 ProteinModelPortal:Q74C37
DNASU:2688652 GeneID:2688652 KEGG:gsu:GSU1838 PATRIC:22026533
ProtClustDB:CLSK828597 BioCyc:GSUL243231:GH27-1781-MONOMER
Uniprot:Q74C37
Length = 846
Score = 575 (207.5 bits), Expect = 1.7e-55, P = 1.7e-55
Identities = 144/398 (36%), Positives = 211/398 (53%)
Query: 30 GSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFED 89
G+GK+T++ L + I + +P + LG G VGYAIRF+
Sbjct: 30 GAGKTTRVPLALLDAPWLNGKRIIMLEPRRLAATNAARWMARSLGEEAGATVGYAIRFDR 89
Query: 90 RTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRL-VNLRA 148
R S RT ++ +T+G+L R + S+P L +I DE HERS+++D+ L L + + LR
Sbjct: 90 RVSARTRVEVVTEGILTRRLQSDPLLEGVGAVIFDEFHERSIHSDLALALCRDVQAGLRE 149
Query: 149 SKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERPTSYLESALKTAIDIH 208
L+I++ SAT+ V+ + P + G+ YPV + H L SA+ A+ I
Sbjct: 150 D-LRIIVMSATMAAAPVAALLGDAPVITSEGRNYPVALRHIPPNDRENLPSAVARAVRIA 208
Query: 209 VREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSP 268
VRE EGD+L F+ G +I + L D + +++PL+G LP Q R P
Sbjct: 209 VRECEGDILAFLPGVGEIRRCGQLLAD------DPPLHAPLVVPLYGDLPFVEQERAILP 262
Query: 269 PPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQR 328
P R+ +++T IAETSLT++GV V+D G ++ +Y+P+SG+ L ++S A QR
Sbjct: 263 VPGR-RKVVLATTIAETSLTIEGVRVVVDGGQTRRLRYDPASGLNRLVTERVSAASATQR 321
Query: 329 VGRAGRTRPGKCYRLYPSTVYHDE--FLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKF 386
GRAGR PG CYRL+P HD+ L PEI + LA L L +SD L +
Sbjct: 322 AGRAGRLGPGTCYRLWPE---HDQQALLAADPPEILIADLAPLALDLAHWGVSDPASLAW 378
Query: 387 DFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
LDPP +LE+A L +DA+D G IT GR MA
Sbjct: 379 --LDPPPRGALEEARNLLKSLDALDGQGMITETGRRMA 414
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 350 (128.3 bits), Expect = 1.9e-55, Sum P(2) = 1.9e-55
Identities = 79/218 (36%), Positives = 123/218 (56%)
Query: 207 IHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVF 266
I + E +G +L+F+ G D+I S L D + S +I+PLH +P Q +VF
Sbjct: 475 IVLEEEDGAILVFLPGWDNI----STLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVF 530
Query: 267 SPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQAN 326
PP R+ +++TNIAETS+T+D VVYVID G +K+ ++ + + ++ +SK A
Sbjct: 531 KKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAK 590
Query: 327 QRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKF 386
QR GRAGR +PG CY LY + + D +PEI R+ L L +K L L I
Sbjct: 591 QRKGRAGRVQPGHCYHLY-NGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLS 649
Query: 387 DFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
+DPPS+E++ ++K L + A+D+ +T +G +A
Sbjct: 650 RLMDPPSNEAVVLSIKHLMELSALDKQEELTPLGVHLA 687
Score = 262 (97.3 bits), Expect = 1.9e-55, Sum P(2) = 1.9e-55
Identities = 63/165 (38%), Positives = 94/165 (56%)
Query: 27 GETGSGKSTQLSQ-ILHRH---GYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGE--E 80
GETG GK+TQ++Q IL + G + I TQP E G
Sbjct: 223 GETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVATERAESCGNGNS 282
Query: 81 VGYAIRFEDRTSERT-LIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGL 139
GY IR + R + I Y T G++L+ + S+ LS S I+LDE HER+L +D+L+ +
Sbjct: 283 TGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTV 342
Query: 140 VKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPV 184
+K L++ R S LK+++ SATL+ EK S++F NCP +++PG +PV
Sbjct: 343 IKDLLHFR-SDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV 386
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 358 (131.1 bits), Expect = 1.9e-55, Sum P(2) = 1.9e-55
Identities = 82/223 (36%), Positives = 127/223 (56%)
Query: 204 AIDIHV--REPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEM 261
A+ H+ +E G VL+F+TG DDI L ++ K L G ++L HGS+
Sbjct: 528 AVLCHICRKERPGAVLVFLTGWDDIRSLSDQI--KAHPL-LGDPNRVLLLMCHGSMATAE 584
Query: 262 QVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQIS 321
Q +F PPN R+ +++TN+AE S+T++ VV+V+DCG K+ Y+ + L IS
Sbjct: 585 QRLIFERAPPNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLPSWIS 644
Query: 322 KVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDI 381
+ A QR GRAGR PG+CY LYP VY D F + +PE+ R+ L L +KSL + I
Sbjct: 645 QASARQRRGRAGRLFPGECYHLYPKCVY-DAFAEYQLPELLRTPLNSLCLQIKSLQVESI 703
Query: 382 NVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
L P S ++++A+ L +I A+DE ++T +G+ ++
Sbjct: 704 AEFLSAALQAPESLAVQNAIGFLKMIGALDEKENLTDLGKLLS 746
Score = 256 (95.2 bits), Expect = 1.9e-55, Sum P(2) = 1.9e-55
Identities = 62/186 (33%), Positives = 97/186 (52%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQ-ILHRHGYTKSGI---IGVTQPXX 59
LP + +E + GETG GK+TQL Q IL + G I TQP
Sbjct: 260 LPSFKDKERLLQAIARNQVIVVSGETGCGKTTQLPQYILESEIESGRGAFCNIICTQPRR 319
Query: 60 XXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYS 119
E G LGE VG+ +R E + T + + T G+LLR +LS+ +L+ +
Sbjct: 320 ISAMAVSERVSAERGEPLGETVGFKVRLEGMRGKNTHLLFCTSGILLRRLLSDRNLNGVT 379
Query: 120 VIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPG 179
+ +DE HER +N D L+ ++K L+ R L++++ SATL+ E S ++ PT+++PG
Sbjct: 380 HVFVDEIHERGMNEDFLIIVLKELLPRRPD-LRLVLMSATLNAELFSNYYGGAPTIHIPG 438
Query: 180 KLYPVE 185
+PV+
Sbjct: 439 FTHPVK 444
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 351 (128.6 bits), Expect = 2.2e-55, Sum P(2) = 2.2e-55
Identities = 79/218 (36%), Positives = 123/218 (56%)
Query: 207 IHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVF 266
I + E +G +L+F+ G D+I S L D + S +I+PLH +P Q +VF
Sbjct: 596 IVLEEEDGAILVFLPGWDNI----STLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQVF 651
Query: 267 SPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQAN 326
PP R+ +++TNIAETS+T+D VVYVID G +K+ ++ + + ++ +SK A
Sbjct: 652 KKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAK 711
Query: 327 QRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKF 386
QR GRAGR +PG CY LY + + D +PEI R+ L L +K L L I
Sbjct: 712 QRKGRAGRVQPGHCYHLY-NGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLS 770
Query: 387 DFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
+DPPS E++ ++K L ++A+D+ +T +G +A
Sbjct: 771 RLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLA 808
Score = 262 (97.3 bits), Expect = 2.2e-55, Sum P(2) = 2.2e-55
Identities = 63/165 (38%), Positives = 93/165 (56%)
Query: 27 GETGSGKSTQLSQ-ILHRH---GYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGE--E 80
GETG GK+TQ++Q IL + G + I TQP E G
Sbjct: 344 GETGCGKTTQVTQFILDDYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNS 403
Query: 81 VGYAIRFEDRTSERT-LIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGL 139
GY IR + R + I Y T G++L+ + S+ LS S I+LDE HER+L +D+L+ +
Sbjct: 404 TGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTV 463
Query: 140 VKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPV 184
+K L+N R LK+++ SATL+ EK S++F NCP +++PG +PV
Sbjct: 464 IKDLLNFRPD-LKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV 507
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 316 (116.3 bits), Expect = 2.8e-55, Sum P(2) = 2.8e-55
Identities = 80/216 (37%), Positives = 115/216 (53%)
Query: 210 REPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPP 269
R EG VLIF+ G I++L L + R E ++ LH L + Q F P
Sbjct: 864 RNIEGAVLIFLPGLAHIQQLYDLLSNDRRFYSERY----QLIALHSVLSTQDQAAAFMLP 919
Query: 270 PPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRV 329
PP R+ +++TNIAET +T+ VV+VID G K+ +Y+ SS M SL +SK A QR
Sbjct: 920 PPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQ 979
Query: 330 GRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFL 389
GRAGR R G C+RLY + + FL+ +VPEI R L L++ DL L
Sbjct: 980 GRAGRVRDGFCFRLYTRERF-EGFLEYSVPEILRVPLEELCLHIMKCDLGSPEDFLSKAL 1038
Query: 390 DPPSSESLEDALKQLYLIDAIDENG-SITSIGRTMA 424
DPP + + +A+ L I A + + +T +G+ +A
Sbjct: 1039 DPPQPQVISNAMNLLRKIGACEPSEPKLTPLGQHLA 1074
Score = 299 (110.3 bits), Expect = 2.8e-55, Sum P(2) = 2.8e-55
Identities = 72/199 (36%), Positives = 107/199 (53%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQ------ILHRHGYTKSGIIGVTQP 57
LP+ ++ +I GETGSGKSTQ+ +L+ G K I+ TQP
Sbjct: 572 LPVFKHRASIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNDCGARKCNIV-CTQP 630
Query: 58 XXXXXXXXXXXXXQELGVRLGEE-----VGYAIRFEDRTSERTLIKYLTDGVLLREILSN 112
+ELG G GY IR E R SE T + Y T GVLLR++ +
Sbjct: 631 RRISAVSLATRVCEELGCEGGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQED 690
Query: 113 PDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNC 172
L+ S +I+DE HERS+ +D LL ++K ++ R S L +++ SAT+D +K S +F++C
Sbjct: 691 GLLADVSHVIVDEVHERSVQSDFLLVILKEILQKR-SDLHLILMSATVDSDKFSTYFTHC 749
Query: 173 PTLNVPGKLYPVEILHSKE 191
P L + G+ YPVE+ H ++
Sbjct: 750 PILRISGRSYPVEVFHLED 768
Score = 37 (18.1 bits), Expect = 5.8e-26, Sum P(2) = 5.8e-26
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 379 SDINVLKFDFLDPPSSESLEDALKQLY-LIDAIDENGSITSIGR 421
S+I+ + +FL+ S +LED ++L L+ A + S + G+
Sbjct: 1156 SEISYCQRNFLNRTSLLTLEDVKQELMKLVRAAGFSSSTSWEGK 1199
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 345 (126.5 bits), Expect = 4.5e-55, Sum P(2) = 4.5e-55
Identities = 85/228 (37%), Positives = 126/228 (55%)
Query: 207 IHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRS--LDEGSCMDAVILPLHGSLPP--EMQ 262
I V E EG +L+F+ G D+I S L D + S + + +I+PLH +P + Q
Sbjct: 496 IAVNENEGAILVFLPGWDNI----STLNDLLMSDQMFKSGRYRFIIIPLHSLMPTVSQTQ 551
Query: 263 V-----RVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDV 317
V +VF PPP R+ +++TNIAETS+T+D VVYVID G +K+ ++ + + ++
Sbjct: 552 VISLFPQVFKKPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIRTMTA 611
Query: 318 VQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLD-VTVPEIQRSSLAGSVLYLKSL 376
+S A QR GRAGR PGKCY LY LD +PEIQR+ L L +K L
Sbjct: 612 EWVSIANAKQRKGRAGRVSPGKCYHLYNGL--RASLLDNYQLPEIQRTPLEELCLQIKVL 669
Query: 377 DLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
L I +DPPS ++E A+ L ++A+D + +T +G +A
Sbjct: 670 KLGPIATFLQKTMDPPSDRAIELAITHLVDLNALDRDEKLTPLGFHLA 717
Score = 264 (98.0 bits), Expect = 4.5e-55, Sum P(2) = 4.5e-55
Identities = 64/165 (38%), Positives = 95/165 (57%)
Query: 27 GETGSGKSTQLSQ-ILH---RHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGE--E 80
GETG GK+TQ++Q IL + G + TQP E +GE
Sbjct: 243 GETGCGKTTQVTQFILDDFIQRGQGSLCRVVCTQPRRISAISVAERVAVERAEPVGEGKS 302
Query: 81 VGYAIRFEDRTSERT-LIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGL 139
GY IR + R + + Y T GV+L+ + S+P LS + ++LDE HERS+ +DIL+ +
Sbjct: 303 CGYQIRLQSRLPRKQGSLLYCTTGVILQWLHSDPYLSSITHLVLDEIHERSVQSDILITI 362
Query: 140 VKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPV 184
VK L+ R LK+++ SATL+ EK SK+F+NCP +++PG +PV
Sbjct: 363 VKDLLTAR-DDLKVVLMSATLNAEKFSKYFNNCPMIHIPGYTFPV 406
Score = 48 (22.0 bits), Expect = 2.2e-32, Sum P(2) = 2.2e-32
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 196 YLESALKTAID-IHVREPEGDVLI-----FMTGQDDIE 227
YL S +D IH R + D+LI +T +DD++
Sbjct: 337 YLSSITHLVLDEIHERSVQSDILITIVKDLLTARDDLK 374
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 316 (116.3 bits), Expect = 5.9e-55, Sum P(2) = 5.9e-55
Identities = 79/216 (36%), Positives = 116/216 (53%)
Query: 210 REPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPP 269
R EG VLIF+ G I++L L + R E ++ LH L + Q F+ P
Sbjct: 864 RNIEGAVLIFLPGLAHIQQLYDLLSNDRRFYSERY----KVIALHSILSTQDQAAAFTLP 919
Query: 270 PPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRV 329
PP R+ +++TNIAET +T+ VV+VID G K+ +Y+ SS M SL +SK A QR
Sbjct: 920 PPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQ 979
Query: 330 GRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFL 389
GRAGR R G C+R+Y + + F+D +VPEI R L L++ +L L
Sbjct: 980 GRAGRVRDGFCFRMYTRERF-EGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKAL 1038
Query: 390 DPPSSESLEDALKQLYLIDAIDENG-SITSIGRTMA 424
DPP + + +A+ L I A + N +T +G+ +A
Sbjct: 1039 DPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLA 1074
Score = 296 (109.3 bits), Expect = 5.9e-55, Sum P(2) = 5.9e-55
Identities = 72/199 (36%), Positives = 106/199 (53%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQ------ILHRHGYTKSGIIGVTQP 57
LP+ ++ ++I GETGSGKSTQ+ +L+ +K I+ TQP
Sbjct: 572 LPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWEASKCNIV-CTQP 630
Query: 58 XXXXXXXXXXXXXQELGVRLGEE-----VGYAIRFEDRTSERTLIKYLTDGVLLREILSN 112
ELG G GY IR E R E T + Y T GVLLR++ +
Sbjct: 631 RRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACESTRLLYCTTGVLLRKLQED 690
Query: 113 PDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNC 172
LS S +I+DE HERS+ +D LL ++K ++ R S L +++ SAT+D EK S +F++C
Sbjct: 691 GLLSNVSHVIVDEVHERSVQSDFLLIILKEILQKR-SDLHLILMSATVDSEKFSTYFTHC 749
Query: 173 PTLNVPGKLYPVEILHSKE 191
P L + G+ YPVE+ H ++
Sbjct: 750 PILRISGRSYPVEVFHLED 768
Score = 44 (20.5 bits), Expect = 5.3e-25, Sum P(2) = 5.3e-25
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 379 SDINVLKFDFLDPPSSESLEDALKQLY-LIDAIDENGSITS 418
S+I + +FL+ S +LED ++L L+ A + S TS
Sbjct: 1156 SEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAGFSSSTTS 1196
Score = 37 (18.1 bits), Expect = 2.9e-24, Sum P(2) = 2.9e-24
Identities = 5/13 (38%), Positives = 11/13 (84%)
Query: 368 GSVLYLKSLDLSD 380
G ++Y KS+D+++
Sbjct: 1229 GKIIYTKSVDVTE 1241
>UNIPROTKB|F1SLN0 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000018413 Uniprot:F1SLN0
Length = 1367
Score = 307 (113.1 bits), Expect = 6.0e-55, Sum P(2) = 6.0e-55
Identities = 82/230 (35%), Positives = 120/230 (52%)
Query: 201 LKTAIDIHVREP-----EGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHG 255
L T ++I R P EG VLIF+ G I++L L R E ++ LH
Sbjct: 850 LLTYLEITDRSPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERY----KVIALHS 905
Query: 256 SLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSL 315
L + Q F+ PP R+ +++TNIAET +T+ VV+VID G K+ +Y+ SS M SL
Sbjct: 906 ILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSL 965
Query: 316 DVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKS 375
+SK A QR GRAGR R G C+R+Y + + F+D +VPEI R L L++
Sbjct: 966 VETFVSKASALQRQGRAGRVRDGFCFRMYTRERF-EGFMDYSVPEILRVPLEELCLHIMK 1024
Query: 376 LDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENG-SITSIGRTMA 424
+L LDPP + + +A+ L I A + N +T +G+ +A
Sbjct: 1025 CNLGSPEDFLSKALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLA 1074
Score = 305 (112.4 bits), Expect = 6.0e-55, Sum P(2) = 6.0e-55
Identities = 73/199 (36%), Positives = 107/199 (53%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQ------ILHRHGYTKSGIIGVTQP 57
LP+ ++ +I GETGSGKSTQ+ +L+ G +K I+ TQP
Sbjct: 569 LPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCNIV-CTQP 627
Query: 58 XXXXXXXXXXXXXQELGVRLGEE-----VGYAIRFEDRTSERTLIKYLTDGVLLREILSN 112
ELG G GY IR E R SE T + Y T GVLLR++ +
Sbjct: 628 RRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQED 687
Query: 113 PDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNC 172
L+ S +I+DE HERS+ +D LL ++K ++ R S L +++ SAT+D EK S +F++C
Sbjct: 688 GLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKR-SDLHLILMSATVDSEKFSTYFTHC 746
Query: 173 PTLNVPGKLYPVEILHSKE 191
P L + G+ YPVE+ H ++
Sbjct: 747 PILRISGRSYPVEVFHLED 765
Score = 37 (18.1 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 5/13 (38%), Positives = 11/13 (84%)
Query: 368 GSVLYLKSLDLSD 380
G ++Y KS+D+++
Sbjct: 1226 GKIIYTKSVDVTE 1238
>UNIPROTKB|I3LG95 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000030291 Uniprot:I3LG95
Length = 1370
Score = 307 (113.1 bits), Expect = 6.1e-55, Sum P(2) = 6.1e-55
Identities = 82/230 (35%), Positives = 120/230 (52%)
Query: 201 LKTAIDIHVREP-----EGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHG 255
L T ++I R P EG VLIF+ G I++L L R E ++ LH
Sbjct: 850 LLTYLEITDRSPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERY----KVIALHS 905
Query: 256 SLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSL 315
L + Q F+ PP R+ +++TNIAET +T+ VV+VID G K+ +Y+ SS M SL
Sbjct: 906 ILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSL 965
Query: 316 DVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKS 375
+SK A QR GRAGR R G C+R+Y + + F+D +VPEI R L L++
Sbjct: 966 VETFVSKASALQRQGRAGRVRDGFCFRMYTRERF-EGFMDYSVPEILRVPLEELCLHIMK 1024
Query: 376 LDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENG-SITSIGRTMA 424
+L LDPP + + +A+ L I A + N +T +G+ +A
Sbjct: 1025 CNLGSPEDFLSKALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLA 1074
Score = 305 (112.4 bits), Expect = 6.1e-55, Sum P(2) = 6.1e-55
Identities = 73/199 (36%), Positives = 107/199 (53%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQ------ILHRHGYTKSGIIGVTQP 57
LP+ ++ +I GETGSGKSTQ+ +L+ G +K I+ TQP
Sbjct: 569 LPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCNIV-CTQP 627
Query: 58 XXXXXXXXXXXXXQELGVRLGEE-----VGYAIRFEDRTSERTLIKYLTDGVLLREILSN 112
ELG G GY IR E R SE T + Y T GVLLR++ +
Sbjct: 628 RRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQED 687
Query: 113 PDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNC 172
L+ S +I+DE HERS+ +D LL ++K ++ R S L +++ SAT+D EK S +F++C
Sbjct: 688 GLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKR-SDLHLILMSATVDSEKFSTYFTHC 746
Query: 173 PTLNVPGKLYPVEILHSKE 191
P L + G+ YPVE+ H ++
Sbjct: 747 PILRISGRSYPVEVFHLED 765
Score = 37 (18.1 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 5/13 (38%), Positives = 11/13 (84%)
Query: 368 GSVLYLKSLDLSD 380
G ++Y KS+D+++
Sbjct: 1229 GKIIYTKSVDVTE 1241
>UNIPROTKB|I3LQ47 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:CU929534 Ensembl:ENSSSCT00000025611 Uniprot:I3LQ47
Length = 1370
Score = 307 (113.1 bits), Expect = 6.1e-55, Sum P(2) = 6.1e-55
Identities = 82/230 (35%), Positives = 120/230 (52%)
Query: 201 LKTAIDIHVREP-----EGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHG 255
L T ++I R P EG VLIF+ G I++L L R E ++ LH
Sbjct: 850 LLTYLEITDRSPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERY----KVIALHS 905
Query: 256 SLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSL 315
L + Q F+ PP R+ +++TNIAET +T+ VV+VID G K+ +Y+ SS M SL
Sbjct: 906 ILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSL 965
Query: 316 DVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKS 375
+SK A QR GRAGR R G C+R+Y + + F+D +VPEI R L L++
Sbjct: 966 VETFVSKASALQRQGRAGRVRDGFCFRMYTRERF-EGFMDYSVPEILRVPLEELCLHIMK 1024
Query: 376 LDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENG-SITSIGRTMA 424
+L LDPP + + +A+ L I A + N +T +G+ +A
Sbjct: 1025 CNLGSPEDFLSKALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLA 1074
Score = 305 (112.4 bits), Expect = 6.1e-55, Sum P(2) = 6.1e-55
Identities = 73/199 (36%), Positives = 107/199 (53%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQ------ILHRHGYTKSGIIGVTQP 57
LP+ ++ +I GETGSGKSTQ+ +L+ G +K I+ TQP
Sbjct: 569 LPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTSKCNIV-CTQP 627
Query: 58 XXXXXXXXXXXXXQELGVRLGEE-----VGYAIRFEDRTSERTLIKYLTDGVLLREILSN 112
ELG G GY IR E R SE T + Y T GVLLR++ +
Sbjct: 628 RRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQED 687
Query: 113 PDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNC 172
L+ S +I+DE HERS+ +D LL ++K ++ R S L +++ SAT+D EK S +F++C
Sbjct: 688 GLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKR-SDLHLILMSATVDSEKFSTYFTHC 746
Query: 173 PTLNVPGKLYPVEILHSKE 191
P L + G+ YPVE+ H ++
Sbjct: 747 PILRISGRSYPVEVFHLED 765
Score = 37 (18.1 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 5/13 (38%), Positives = 11/13 (84%)
Query: 368 GSVLYLKSLDLSD 380
G ++Y KS+D+++
Sbjct: 1229 GKIIYTKSVDVTE 1241
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 350 (128.3 bits), Expect = 7.1e-55, Sum P(2) = 7.1e-55
Identities = 85/231 (36%), Positives = 131/231 (56%)
Query: 197 LESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGS 256
+E+ L+ +D P G +L+F+ G +I+ L +L+ + S VI PLH S
Sbjct: 831 IEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNR-CVIHPLHSS 889
Query: 257 LPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLD 316
L E Q VF PP + I+STNIAETS+T+D VVYVID G +K+++Y+ S GM SL+
Sbjct: 890 LSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLE 949
Query: 317 VVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSL 376
+S+ A QR GRAGR G C+ L+ S Y+ + L +PEIQR L L +K L
Sbjct: 950 DTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKIL 1009
Query: 377 DLSDINVLKFDF---LDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
++ + L+ F ++PP ++SL + +L + A+ + +T +G +A
Sbjct: 1010 EMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLA 1060
Score = 261 (96.9 bits), Expect = 7.1e-55, Sum P(2) = 7.1e-55
Identities = 65/187 (34%), Positives = 95/187 (50%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYT----KSGIIGVTQPX 58
+LP + ETI G TG GK+TQ+ Q + K I TQP
Sbjct: 543 SLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKVANIICTQPR 602
Query: 59 XXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPY 118
+E R+G VGY IR E S T + Y T GVLLR + + L
Sbjct: 603 RISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDTALQGV 662
Query: 119 SVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVP 178
S II+DE HER+ +D LL ++K +V+ R L++++ SATL+ E S +F++CP + +P
Sbjct: 663 SHIIVDEVHERTEESDFLLLVLKDIVSQRPG-LQVILMSATLNAELFSDYFNSCPVITIP 721
Query: 179 GKLYPVE 185
G+ +PV+
Sbjct: 722 GRTFPVD 728
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 345 (126.5 bits), Expect = 7.2e-55, Sum P(2) = 7.2e-55
Identities = 85/231 (36%), Positives = 129/231 (55%)
Query: 197 LESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGS 256
+E+ L+ +D P G VL+F+ G +I+ L +L+ + S VI PLH S
Sbjct: 833 IEALLEWIVDGKHAYPPGAVLVFLPGLAEIKMLYEQLQSNSLFNNRRSHR-CVIHPLHSS 891
Query: 257 LPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLD 316
L E Q VF PP + I+STNIAETS+T+D VVYVID G +K+++Y+ GM SL+
Sbjct: 892 LSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLE 951
Query: 317 VVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSL 376
+S+ A QR GRAGR G C+ L+ S Y+ + L +PEIQR L L +K L
Sbjct: 952 DTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKIL 1011
Query: 377 DLSDINVLKFDF---LDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
++ + L+ F ++PP +SL + +L + A+ + +T +G +A
Sbjct: 1012 EMFSTHNLQSVFSRLIEPPHIDSLRASKVRLRDLGALTPDEKLTPLGYHLA 1062
Score = 266 (98.7 bits), Expect = 7.2e-55, Sum P(2) = 7.2e-55
Identities = 70/187 (37%), Positives = 99/187 (52%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQ-ILHR--HGYTK--SGIIGVTQPX 58
LP + ETI G TG GK+TQ+ Q IL +G + + II TQP
Sbjct: 545 LPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANII-CTQPR 603
Query: 59 XXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPY 118
+E R+G VGY IR E S T + Y T GVLLR + + L
Sbjct: 604 RISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDATLQGV 663
Query: 119 SVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVP 178
+ II+DE HER+ +D LL ++K +V RA+ L++++ SATLD SK+FS CP + +P
Sbjct: 664 THIIVDEVHERTEESDFLLLVLKDIVMQRAT-LQVILMSATLDAGLFSKYFSYCPVITIP 722
Query: 179 GKLYPVE 185
G+ +PV+
Sbjct: 723 GRAFPVD 729
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 345 (126.5 bits), Expect = 9.1e-55, Sum P(2) = 9.1e-55
Identities = 83/231 (35%), Positives = 131/231 (56%)
Query: 197 LESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGS 256
+E+ L+ +D P G +L+F+ G +I+ L +L+ + S V+ PLH S
Sbjct: 827 IEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHR-CVVHPLHSS 885
Query: 257 LPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLD 316
L E Q VF PP + I+STNIAETS+T+D VVYVID G +K+++Y+ S GM SL+
Sbjct: 886 LSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLE 945
Query: 317 VVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSL 376
+S+ A QR GRAGR G C+ L+ S ++ + L +PEIQR L L +K L
Sbjct: 946 DTFVSQANALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKIL 1005
Query: 377 DLSDINVLKFDF---LDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
++ + L+ F ++PP ++SL + +L + A+ + +T +G +A
Sbjct: 1006 EMFSTHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDEKLTPLGYHLA 1056
Score = 265 (98.3 bits), Expect = 9.1e-55, Sum P(2) = 9.1e-55
Identities = 65/187 (34%), Positives = 97/187 (51%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYT----KSGIIGVTQPX 58
+LP + ETI G TG GK+TQ+ Q + + K I TQP
Sbjct: 539 SLPAWEERETILKLLSEHQVLVISGMTGCGKTTQIPQFILDDSLSGPPEKVANIICTQPR 598
Query: 59 XXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPY 118
+E R+G VGY IR E S T + Y T GVLLR + + L
Sbjct: 599 RISAISVAERVAKERTERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDTSLQGV 658
Query: 119 SVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVP 178
+ II+DE HER+ +D LL ++K +V L+ L++++ SATL+ E S++FS+CP + +P
Sbjct: 659 THIIVDEVHERTEESDFLLLVLKDIV-LQRPNLQVILMSATLNAELFSEYFSSCPVITIP 717
Query: 179 GKLYPVE 185
G+ +PV+
Sbjct: 718 GRTFPVD 724
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 305 (112.4 bits), Expect = 9.9e-55, Sum P(2) = 9.9e-55
Identities = 73/199 (36%), Positives = 107/199 (53%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQ------ILHRHGYTKSGIIGVTQP 57
LP+ ++ ++ GETGSGKSTQ+ +L+ G TK I+ TQP
Sbjct: 569 LPVFKHRSSVVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWGTTKCNIV-CTQP 627
Query: 58 XXXXXXXXXXXXXQELGVRLGEE-----VGYAIRFEDRTSERTLIKYLTDGVLLREILSN 112
ELG G GY IR E R SE T + Y T GVLLR++ +
Sbjct: 628 RRISAVSLATRVCDELGCENGPGGKNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQED 687
Query: 113 PDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNC 172
L+ S +I+DE HERS+ +D LL ++K ++ R S L +++ SAT+D EK S +F++C
Sbjct: 688 GLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKR-SDLHLILMSATVDCEKFSTYFTHC 746
Query: 173 PTLNVPGKLYPVEILHSKE 191
P L + G+ YPVE+ H ++
Sbjct: 747 PILRISGRSYPVEVFHLED 765
Score = 305 (112.4 bits), Expect = 9.9e-55, Sum P(2) = 9.9e-55
Identities = 77/213 (36%), Positives = 113/213 (53%)
Query: 213 EGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPN 272
EG VLIF+ G I++L L R E ++ LH L + Q F+ PP
Sbjct: 864 EGAVLIFLPGLAHIQQLYDLLSTDRRFFSERY----KVIALHSILSTQDQAAAFTLPPQG 919
Query: 273 CRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRA 332
R+ +++TNIAET +T+ VV+VID G K+ +Y+ SS M SL +SK A QR GRA
Sbjct: 920 VRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRA 979
Query: 333 GRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPP 392
GR R G C+R+Y + + F+D +VPEI R L L++ +L LDPP
Sbjct: 980 GRVRDGFCFRMYTRERF-EGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPP 1038
Query: 393 SSESLEDALKQLYLIDAIDENG-SITSIGRTMA 424
+ + +A+ L I A + N +T +G+ +A
Sbjct: 1039 QLQVISNAMNLLRKIGACELNEPKLTPLGQHLA 1071
Score = 38 (18.4 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 5/13 (38%), Positives = 11/13 (84%)
Query: 368 GSVLYLKSLDLSD 380
G ++Y KS+D+++
Sbjct: 1226 GKIIYTKSVDITE 1238
Score = 38 (18.4 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 379 SDINVLKFDFLDPPSSESLEDALKQLY-LIDAIDENGSITS 418
S+I + +FL+ S +LED ++L L+ A S TS
Sbjct: 1153 SEIAYCRKNFLNRTSLLTLEDVKQELIKLVKAAGFLSSTTS 1193
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 340 (124.7 bits), Expect = 1.0e-54, Sum P(2) = 1.0e-54
Identities = 77/218 (35%), Positives = 121/218 (55%)
Query: 207 IHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVF 266
I + E +G +L+F+ G D+I S L D + S +I+PLH +P Q +VF
Sbjct: 463 IVLEEEDGAILVFLPGWDNI----STLHDLLMSQVMFKSDRFIIIPLHSLMPTVNQTQVF 518
Query: 267 SPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQAN 326
PP R+ +++TNIAETS+T+D VV+VID G +K+ ++ + + ++ +SK A
Sbjct: 519 KKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSKANAK 578
Query: 327 QRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKF 386
QR GRAGR +PG CY LY + + D +PEI R+ L L +K L L I
Sbjct: 579 QRKGRAGRVQPGHCYHLY-NGLRASLLDDYQLPEILRTPLEELCLQIKILKLGGIAYFLS 637
Query: 387 DFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
+DPPS +++ A+ L ++A+D +T +G +A
Sbjct: 638 KLMDPPSRDAVMLAINHLMELNALDRQEELTPLGVHLA 675
Score = 265 (98.3 bits), Expect = 1.0e-54, Sum P(2) = 1.0e-54
Identities = 62/165 (37%), Positives = 95/165 (57%)
Query: 27 GETGSGKSTQLSQ-ILHRH---GYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLG--EE 80
GETG GK+TQ++Q IL + G + I TQP E G +
Sbjct: 211 GETGCGKTTQVTQFILDDYIERGKGSTCRIVCTQPRRISAISVAERVAAERAEACGNGKS 270
Query: 81 VGYAIRFEDRTSERT-LIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGL 139
GY IR + R + I Y T G++L+ + S+ LS S ++LDE HER+L +D+L+ +
Sbjct: 271 TGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHLSSISHVVLDEIHERNLQSDVLMSI 330
Query: 140 VKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPV 184
+K L+N+R LK+++ SATL+ EK S++F NCP +++PG +PV
Sbjct: 331 IKDLLNVRLD-LKVILMSATLNAEKFSEYFDNCPMIHIPGFTFPV 374
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 343 (125.8 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
Identities = 84/231 (36%), Positives = 129/231 (55%)
Query: 197 LESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGS 256
+E+ L+ +D P G +L+F+ G +I+ L +L+ + S VI PLH S
Sbjct: 783 IEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHR-CVIHPLHSS 841
Query: 257 LPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLD 316
L E Q VF PP + I+STNIAETS+T+D VVYVID G +K+++Y+ GM SL+
Sbjct: 842 LSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLE 901
Query: 317 VVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSL 376
+S+ A QR GRAGR G C+ L+ S Y+ + L +PEIQR L L +K L
Sbjct: 902 DTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKIL 961
Query: 377 DLSDINVLKFDF---LDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
++ + L+ F ++PP +SL + +L + A+ + +T +G +A
Sbjct: 962 EMFSTHNLQSVFSRLIEPPHVDSLRASKVRLRDLGALTPDEKLTPLGYHLA 1012
Score = 266 (98.7 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
Identities = 70/187 (37%), Positives = 99/187 (52%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQ-ILHR--HGYTK--SGIIGVTQPX 58
LP + ETI G TG GK+TQ+ Q IL +G + + II TQP
Sbjct: 495 LPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANII-CTQPR 553
Query: 59 XXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPY 118
+E R+G VGY IR E S T + Y T GVLLR + + L
Sbjct: 554 RISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDATLQGV 613
Query: 119 SVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVP 178
+ II+DE HER+ +D LL ++K +V RA+ L++++ SATLD SK+FS CP + +P
Sbjct: 614 THIIVDEVHERTEESDFLLLVLKDIVMQRAT-LQVILMSATLDAGLFSKYFSYCPVITIP 672
Query: 179 GKLYPVE 185
G+ +PV+
Sbjct: 673 GRAFPVD 679
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 343 (125.8 bits), Expect = 1.2e-54, Sum P(2) = 1.2e-54
Identities = 84/231 (36%), Positives = 129/231 (55%)
Query: 197 LESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGS 256
+E+ L+ +D P G +L+F+ G +I+ L +L+ + S VI PLH S
Sbjct: 836 IEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHR-CVIHPLHSS 894
Query: 257 LPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLD 316
L E Q VF PP + I+STNIAETS+T+D VVYVID G +K+++Y+ GM SL+
Sbjct: 895 LSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLE 954
Query: 317 VVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSL 376
+S+ A QR GRAGR G C+ L+ S Y+ + L +PEIQR L L +K L
Sbjct: 955 DTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKIL 1014
Query: 377 DLSDINVLKFDF---LDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
++ + L+ F ++PP +SL + +L + A+ + +T +G +A
Sbjct: 1015 EMFSTHNLQSVFSRLIEPPHVDSLRASKVRLRDLGALTPDEKLTPLGYHLA 1065
Score = 266 (98.7 bits), Expect = 1.2e-54, Sum P(2) = 1.2e-54
Identities = 70/187 (37%), Positives = 99/187 (52%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQ-ILHR--HGYTK--SGIIGVTQPX 58
LP + ETI G TG GK+TQ+ Q IL +G + + II TQP
Sbjct: 548 LPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVANII-CTQPR 606
Query: 59 XXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPY 118
+E R+G VGY IR E S T + Y T GVLLR + + L
Sbjct: 607 RISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDATLQGV 666
Query: 119 SVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVP 178
+ II+DE HER+ +D LL ++K +V RA+ L++++ SATLD SK+FS CP + +P
Sbjct: 667 THIIVDEVHERTEESDFLLLVLKDIVMQRAT-LQVILMSATLDAGLFSKYFSYCPVITIP 725
Query: 179 GKLYPVE 185
G+ +PV+
Sbjct: 726 GRAFPVD 732
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 343 (125.8 bits), Expect = 1.7e-53, Sum P(2) = 1.7e-53
Identities = 85/233 (36%), Positives = 134/233 (57%)
Query: 197 LESALKTAID-IHVREPE-GDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLH 254
+E+ L+ +D H P+ G +L+F+ G +I+ L +L+ + S VI PLH
Sbjct: 824 IEALLEWIVDGKHSYPPDPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNR-CVIHPLH 882
Query: 255 GSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYS 314
SL E Q VF PP + I+STNIAETS+T+D VVYVID G +K+++Y+ S GM S
Sbjct: 883 SSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMES 942
Query: 315 LDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLK 374
L+ +S+ A QR GRAGR G C+ L+ S ++ + L +PEIQR L L +K
Sbjct: 943 LEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIK 1002
Query: 375 SLDLSDINVLKFDF---LDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
L++ + L+ F ++PP ++SL + +L + A+ + ++T +G +A
Sbjct: 1003 ILEMFSTHNLQSVFARLIEPPHADSLRASKIRLRDLGALTPDETLTPLGYHLA 1055
Score = 255 (94.8 bits), Expect = 1.7e-53, Sum P(2) = 1.7e-53
Identities = 63/187 (33%), Positives = 95/187 (50%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYT----KSGIIGVTQPX 58
+LP + E I G TG GK+TQ+ Q + K I TQP
Sbjct: 536 SLPAWEERENILKLLSKHQVLVVSGMTGCGKTTQIPQFILDDSLNGPPEKVANIICTQPR 595
Query: 59 XXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPY 118
+E R+G VGY IR E S T + Y T GVLLR + + L
Sbjct: 596 RISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDTALQGV 655
Query: 119 SVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVP 178
+ II+DE HER+ +D LL ++K +V L+ L++++ SATL+ E S++F++CP + +P
Sbjct: 656 THIIVDEVHERTEESDFLLLVLKDIV-LQRPTLQVILMSATLNAELFSEYFNSCPVITIP 714
Query: 179 GKLYPVE 185
G+ +PV+
Sbjct: 715 GRTFPVD 721
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 343 (125.8 bits), Expect = 3.1e-53, Sum P(2) = 3.1e-53
Identities = 78/210 (37%), Positives = 123/210 (58%)
Query: 213 EGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPN 272
+G +L+F+ G ++I K KL D R + +IL LH +P E Q +VF+ PP
Sbjct: 575 DGAILVFLPGWEEISKTKEKLLDD-RFFAHSAKF--IILCLHSRVPAEEQKKVFNRPPRG 631
Query: 273 CRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRA 332
CR+ +++TNIAE+++T+D VVYVID G +K++ Y+P + + +L +SK A QR GRA
Sbjct: 632 CRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQSSWVSKANAKQRAGRA 691
Query: 333 GRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLS-DINVLKFDFLDP 391
GR + G CY LY S + + VPE+ R + L +K LD + ++N +DP
Sbjct: 692 GRCQAGICYHLY-SKLRAASLPEYRVPEVMRMPVDELCLQVKMLDPNCNVNDFLQKLMDP 750
Query: 392 PSSESLEDALKQLYLIDAIDENGSITSIGR 421
P ++S+E+AL L I A+ +T +G+
Sbjct: 751 PVAQSIENALIILKDIGALTPEEELTELGQ 780
Score = 254 (94.5 bits), Expect = 3.1e-53, Sum P(2) = 3.1e-53
Identities = 60/189 (31%), Positives = 94/189 (49%)
Query: 2 ANLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQIL--HR-HGYTKSGIIGVTQPX 58
+ LPI + + I GETG GK+TQ+ Q L H H ++ I TQP
Sbjct: 215 SKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHSKKEACKIICTQPR 274
Query: 59 XXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILS---NPDL 115
E G +G VGY +R + + + + T+G+LLR ++ N +
Sbjct: 275 RISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVLIGKGVNSSV 334
Query: 116 SPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTL 175
+ II+DE HER +D +L +++ L+ L++++ SATLD E+ S++F CP +
Sbjct: 335 PDITHIIVDEIHERDSYSDFMLMILRDLLPSNPH-LRLILMSATLDAERFSEYFGGCPVV 393
Query: 176 NVPGKLYPV 184
VPG YPV
Sbjct: 394 RVPGFTYPV 402
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 313 (115.2 bits), Expect = 1.5e-52, Sum P(2) = 1.5e-52
Identities = 82/217 (37%), Positives = 121/217 (55%)
Query: 214 GDVLIFMTGQDDIEKLVSKL--EDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPP 271
G +LIF+ G D+I L ++ +DK R +D V + LH ++ Q V PP
Sbjct: 533 GAILIFLPGYDEIISLRDRIIFDDK-RFVDNAHSKYQVFM-LHSNMQTLDQKNVLKTPPS 590
Query: 272 NCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGR 331
R+ I+STNIAETS+TV+ VV+VID G +K++ ++ S + L V ISK A QR GR
Sbjct: 591 GIRKIILSTNIAETSITVNDVVFVIDSGKMKEKSFDALSCVTMLKTVWISKASAIQRRGR 650
Query: 332 AGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFL-- 389
AGR RPG C+ L+ S + L+ PE++R L L+ K L + +N DFL
Sbjct: 651 AGRCRPGVCFHLF-SRLRFQNMLEFQTPELRRMPLQELCLHTKLL--APVNCPVVDFLMK 707
Query: 390 --DPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
DPP + + +A++ L IDA+D +T +G +A
Sbjct: 708 APDPPPALIVRNAIQMLKKIDAMDVWEDLTELGYHLA 744
Score = 276 (102.2 bits), Expect = 1.5e-52, Sum P(2) = 1.5e-52
Identities = 66/200 (33%), Positives = 109/200 (54%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI---IGVTQPXX 59
+LP+ + +E I +GETGSGK+TQ+ Q L Y ++G+ I TQP
Sbjct: 102 SLPVFEKKEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCY-ENGVPCRIFCTQPRR 160
Query: 60 XXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPD-LSPY 118
E ++G+ VGY IR E R S RTL+ + T+G+LLR +++ LS
Sbjct: 161 LAVIAVAERVAAERREKVGQTVGYQIRLESRVSPRTLLTFCTNGILLRTLMAGDSALSTV 220
Query: 119 SVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVP 178
+ +I+DE HER +D LL ++ ++ + LK++I+SA LD K+F +CP +++
Sbjct: 221 THVIVDEVHERDRFSDFLLIKLRDILQ-NQTNLKLIISSAALDANLFIKYFGSCPVIHIQ 279
Query: 179 GKLYPVEILHSKE--RPTSY 196
G+ + V+ + ++ R T Y
Sbjct: 280 GRPFEVKEMFLEDILRSTGY 299
Score = 37 (18.1 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 13/59 (22%), Positives = 24/59 (40%)
Query: 195 SYLESALKTAIDIHVREPEGDVLIFMT---GQDDIEKLVSKLEDKIRS--LDEGSCMDA 248
S +E + +H + G + + GQ ++ L+ + S LDE S + A
Sbjct: 431 SQVEQLISMGASVHCKSSNGWMALDWAKHFGQTEVVDLLESYSASMESGNLDESSLVQA 489
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 554 (200.1 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 151/443 (34%), Positives = 226/443 (51%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
NLPI ++ + + G+TG GKSTQ+ Q L+ GY I TQP
Sbjct: 145 NLPIARFRKDLREALDTSRVVIVAGDTGCGKSTQVPQYLYDFGYRS---IACTQPRRLAC 201
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
EL G V + IRFE ++ T I ++T+G+LLR++ +L Y +I
Sbjct: 202 VSLCKRVAHELLDDYGSRVAFQIRFERSRTKLTNILFITEGLLLRQLAVAANLDQYDALI 261
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSN--CPTLNVPGK 180
LDE HER+L D LLG+ K L+ R +LK+++ SAT++ E +F + VPG+
Sbjct: 262 LDEIHERNLFGDFLLGVTKCLLRARP-QLKLILMSATINVELFHGYFGEEGARLVQVPGR 320
Query: 181 LYPVEILH--------------SKERPTSYLESA----LKTAIDIHVREPE-GDVLIFMT 221
L+P+++ + SK + ++ A + + ID E GDVLIF++
Sbjct: 321 LFPIKLRYLPPPALELKAGQATSKRSQRNRIDPAPFVQVLSLIDQQYPTSERGDVLIFVS 380
Query: 222 GQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTN 281
G ++IE +V + + ++LPLH Q +VF P R+ IVSTN
Sbjct: 381 GVNEIESVVEAVHEYATEQTHW-----LVLPLHSGQAIADQSKVFDYAPEGMRKCIVSTN 435
Query: 282 IAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCY 341
IAETSLTVDGV +V+D G VK+ ++ + L +SK A+QR GRAGRT PG C+
Sbjct: 436 IAETSLTVDGVRFVVDSGKVKEMNFDATCKGQRLKEFWVSKSSADQRKGRAGRTGPGVCF 495
Query: 342 RLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDAL 401
RLY + Y+ F PEI R L +L + S+ L D+ F F++ P +E +E +
Sbjct: 496 RLYTAEQYN-AFEAYPTPEIYRVPLDTMLLQMVSMGLPDVRA--FPFIEAPETERIEQTI 552
Query: 402 KQLYLIDAIDENGSITSIGRTMA 424
L A+ IT +GR++A
Sbjct: 553 LALKQHCALSVEEKITPLGRSLA 575
>UNIPROTKB|J9P264 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047330
Uniprot:J9P264
Length = 1219
Score = 299 (110.3 bits), Expect = 1.9e-52, Sum P(2) = 1.9e-52
Identities = 78/254 (30%), Positives = 140/254 (55%)
Query: 182 YPVEILHSKERPTSYLESALK----TAIDIHV--REPEGDVLIFMTGQDDIEKLVSKLED 235
YP H E P S E AL T + +H+ R G +L F+ G +I+ + +L++
Sbjct: 663 YPHRHRHH-EWPRSEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQE 721
Query: 236 KIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYV 295
+ + E + ILP+H ++P Q +F PP R+ +++TNIAETS+TV+ +V+V
Sbjct: 722 AL-GMHESKYL---ILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHV 777
Query: 296 IDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLD 355
+D G K+ +Y+ + + L+ V +S+ QR GRAGR + G Y L+P + ++ +
Sbjct: 778 VDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRL-EKMVP 836
Query: 356 VTVPEIQRSSLAGSVLYLKSLDLSDINVLKF--DFLDPPSSESLEDALKQLYLIDAIDEN 413
VPEI R+ L VL K + + + ++F +D P+ +++++A+ L I +D+
Sbjct: 837 FQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQR 895
Query: 414 GSITSIGRTMAGTS 427
+T++G+ +A S
Sbjct: 896 EYLTTLGQRLAHIS 909
Score = 288 (106.4 bits), Expect = 1.9e-52, Sum P(2) = 1.9e-52
Identities = 67/188 (35%), Positives = 100/188 (53%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI-----IGVTQPX 58
LP+ + +TI G+TG GK+T++ Q+L Y G + +TQP
Sbjct: 462 LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVSEGRGARCNVIITQPR 520
Query: 59 XXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERT-LIKYLTDGVLLREILSNPDLSP 117
ELG L VG+ +R E + R + + T G+LLR++ SNP L
Sbjct: 521 RISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEG 580
Query: 118 YSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNV 177
S +I+DE HER +NTD LL L+K L L + L++++ SAT D E+ S++F CP + V
Sbjct: 581 VSHVIVDEVHERDVNTDFLLILLKGLQRLNPA-LRLVLMSATGDNERFSRYFGGCPVIKV 639
Query: 178 PGKLYPVE 185
PG +YPV+
Sbjct: 640 PGFMYPVK 647
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 354 (129.7 bits), Expect = 3.2e-52, Sum P(2) = 3.2e-52
Identities = 78/212 (36%), Positives = 119/212 (56%)
Query: 213 EGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPN 272
EG +L+F+ G +I L+++L R G+ D +LPLH S+ Q +VF PP
Sbjct: 882 EGAILVFLPGMSEINMLLNRLAASYRF--RGASGDW-LLPLHSSIASTEQKKVFLRPPKG 938
Query: 273 CRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRA 332
R+ I++TNIAETS+T++ VVYVID G K+ +YNP + S+ +SK A QR+GRA
Sbjct: 939 IRKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWVSKANARQRMGRA 998
Query: 333 GRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPP 392
GR +PG C+ LY + VPE+ R L L++K L L I L+PP
Sbjct: 999 GRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELCLHIKLLGLGQIKPFLSKALEPP 1058
Query: 393 SSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
S ++ A+ L+ + A++ + +T +G +A
Sbjct: 1059 SESAINSAILLLHKVGALEGDEELTPLGHHLA 1090
Score = 232 (86.7 bits), Expect = 3.2e-52, Sum P(2) = 3.2e-52
Identities = 70/232 (30%), Positives = 109/232 (46%)
Query: 2 ANLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQIL------HRHGYTKSGIIGVT 55
A LPI + ++ I GETGSGK+TQ+ Q + HG II T
Sbjct: 595 AALPISEVKKDILQKLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHG-GYCNII-CT 652
Query: 56 QPXXXXXXXXXXXXXQELGVRLGEEV-GYAIRFEDRTSERTLIKYLTDGVLLREILSNPD 114
QP E V Y +R ++ S++T + + T G+LLR+++ +
Sbjct: 653 QPRAITVAQRVADERCEPPPGFDNSVVAYQVRHQNARSDKTRLLFCTTGILLRKLVGDTT 712
Query: 115 LSPYSVIILDEAHERSLNTDILLGLVKRLVNLRA-----SKLKILITSATLDGEKVSKFF 169
L + II+DE HERSL D LL ++K L+ ++ KLK+++ SAT+D + S++F
Sbjct: 713 LKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDNALPKLKVILMSATVDAHQFSRYF 772
Query: 170 SNCPTLNVPGKLYPVE--ILHSKERPTSYL---ESALKTAIDIHVREPEGDV 216
CP + G+ +PV L T YL +S + D + + G V
Sbjct: 773 GQCPIITAQGRTHPVTTYFLEDIYERTKYLLASDSPAALSSDTSITDKLGSV 824
>POMBASE|SPBC15C4.05 [details] [associations]
symbol:SPBC15C4.05 "ATP-dependent RNA/DNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPBC15C4.05 GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GO:GO:0003676 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 PIR:T39475 RefSeq:NP_595925.1
ProteinModelPortal:O60114 EnsemblFungi:SPBC15C4.05.1 GeneID:2539831
KEGG:spo:SPBC15C4.05 OrthoDB:EOG4TXG12 NextBio:20800979
Uniprot:O60114
Length = 1428
Score = 331 (121.6 bits), Expect = 4.4e-52, Sum P(2) = 4.4e-52
Identities = 85/243 (34%), Positives = 130/243 (53%)
Query: 193 PTSYLESALKTAIDIHVRE---PEGD------VLIFMTGQDDIEKLVSKLEDKIRSLDEG 243
P Y E A+ + +++ + EGD VL+F+ G +I ++ S +ED +
Sbjct: 874 PAWYNEKAINYGLIVYLLKYIFTEGDPKFSKCVLVFLPGISEILRVKSLIEDMPMFRNHR 933
Query: 244 S-CMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
C I LH +L Q VF+ PP CR+ ++STNIAET +T+ V VID G +
Sbjct: 934 KFC----IYMLHSTLSSAQQQSVFNIPPKGCRKIVLSTNIAETGVTIPDVTCVIDTGVHR 989
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHD-EFLDVTVPEI 361
+ +YN + L +SK A QR GRAGR + G CY L+ S HD +FL PEI
Sbjct: 990 EMRYNSRRHLSRLTDTFVSKANAKQRSGRAGRVQEGICYHLF-SKFKHDTQFLSYQTPEI 1048
Query: 362 QRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGR 421
R +L VL +K + D+ + LDPPSS ++ AL++L+ + A+ EN +T +G+
Sbjct: 1049 LRLNLQEVVLRVKMCQMGDVQDVLGKALDPPSSTNIIRALEKLHQVGALSENEKLTKLGK 1108
Query: 422 TMA 424
++
Sbjct: 1109 FLS 1111
Score = 254 (94.5 bits), Expect = 4.4e-52, Sum P(2) = 4.4e-52
Identities = 66/189 (34%), Positives = 96/189 (50%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI---IGVTQPXXX 60
LP + ETI G+TG GKSTQ+ L + TK+G I VT+P
Sbjct: 631 LPATMFRETIIDAVNNSQLLIISGDTGCGKSTQIPAFLLENS-TKNGKAVKIYVTEPRRI 689
Query: 61 XXXXXXXXXXQELG-----VRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDL 115
QELG R E VGY++R + + + T + Y+T G LR + ++
Sbjct: 690 SAISLANRVSQELGGNPPSARSHELVGYSVRLDSKCTPLTPLTYVTTGTFLRLLEVGNEI 749
Query: 116 SPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTL 175
+ +I+DE HERS+++D+LL V L+ + LKI+I SATL+ EK +F +
Sbjct: 750 ESVTHLIIDEVHERSIDSDLLLIHVLHLLK-QHPHLKIIIMSATLNAEKFQLYFEGSNLI 808
Query: 176 NVPGKLYPV 184
+PGK YPV
Sbjct: 809 TIPGKTYPV 817
Score = 37 (18.1 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 393 SSESLEDALKQLYLIDA 409
S++S EDA+ ++ LI A
Sbjct: 859 SNKSAEDAIVEMNLIPA 875
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 307 (113.1 bits), Expect = 7.9e-52, Sum P(2) = 7.9e-52
Identities = 81/217 (37%), Positives = 121/217 (55%)
Query: 214 GDVLIFMTGQDDIEKLVSKL--EDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPP 271
G +LIF+ G D+I L ++ +DK R D + LH ++ Q +V PP
Sbjct: 638 GAILIFLPGYDEIVGLRDRILFDDK-RFADNTHRYQ--VFMLHSNMQTSDQKKVLKNPPA 694
Query: 272 NCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGR 331
R+ I+STNIAETS+TV+ VV+VID G VK++ ++ + + L +V ISK A QR GR
Sbjct: 695 GVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGR 754
Query: 332 AGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFL-- 389
AGR RPG C+RL+ S + L+ PE+ R L L+ K L + +N DFL
Sbjct: 755 AGRCRPGICFRLF-SRLRFQNMLEFQTPELLRMPLQELCLHTKLL--APVNCTIADFLMK 811
Query: 390 --DPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
+PP + + +A++ L IDA+D +T +G +A
Sbjct: 812 APEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLA 848
Score = 276 (102.2 bits), Expect = 7.9e-52, Sum P(2) = 7.9e-52
Identities = 75/248 (30%), Positives = 128/248 (51%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI---IGVTQPXX 59
+LP+ + +E I +GETGSGK+TQ+ Q L + K+GI I TQP
Sbjct: 207 SLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQPRR 265
Query: 60 XXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPD-LSPY 118
E R+G+ +GY IR E R S +TL+ + T+GVLLR +++ LS
Sbjct: 266 LAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLSTV 325
Query: 119 SVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVP 178
+ +I+DE HER +D LL ++ L+ + LK++++SA LD ++F +CP + +
Sbjct: 326 THVIVDEVHERDRFSDFLLTKLRDLLQKHPT-LKLILSSAALDVNLFIRYFGSCPVIYIQ 384
Query: 179 GKLYPVEILHSKE--RPTSYL-ESALKTAIDIHVREPEGDVLI-FMTGQDDIEKLVSKLE 234
G+ + V+ + ++ R T Y + LK + E + L + + Q++ K S+ +
Sbjct: 385 GRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQREEKQQTTLTEWYSAQENTFKPESQRQ 444
Query: 235 DKIRSLDE 242
+ S+ E
Sbjct: 445 RAVASVSE 452
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 305 (112.4 bits), Expect = 1.1e-51, Sum P(2) = 1.1e-51
Identities = 81/217 (37%), Positives = 121/217 (55%)
Query: 214 GDVLIFMTGQDDIEKLVSKL--EDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPP 271
G +LIF+ G D+I L ++ +DK R D + LH ++ Q +V PP
Sbjct: 622 GAILIFLPGYDEIVGLRDRILFDDK-RFADNTHRYQ--VFMLHSNMQTSDQKKVLKNPPA 678
Query: 272 NCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGR 331
R+ I+STNIAETS+TV+ VV+VID G VK++ ++ + + L +V ISK A QR GR
Sbjct: 679 GVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRKGR 738
Query: 332 AGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFL-- 389
AGR RPG C+RL+ S + L+ PE+ R L L+ K L + +N DFL
Sbjct: 739 AGRCRPGICFRLF-SRLRFQNMLEFQTPELLRMPLQELCLHTKLL--APVNCPIADFLMK 795
Query: 390 --DPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
+PP + + +A++ L IDA+D +T +G +A
Sbjct: 796 APEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLA 832
Score = 272 (100.8 bits), Expect = 1.1e-51, Sum P(2) = 1.1e-51
Identities = 74/248 (29%), Positives = 128/248 (51%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI---IGVTQPXX 59
+LP+ + +E I +GETGSGK+TQ+ Q L + K+GI I TQP
Sbjct: 191 SLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQPRR 249
Query: 60 XXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPD-LSPY 118
E R+G+ +GY IR E R S +TL+ + T+GVLLR +++ LS
Sbjct: 250 LAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLSTV 309
Query: 119 SVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVP 178
+ +I+DE HER +D LL ++ L+ + LK++++SA LD ++F +CP + +
Sbjct: 310 THVIVDEVHERDRFSDFLLTKLRDLLQKHPT-LKLILSSAALDVNLFIRYFGSCPVIYIQ 368
Query: 179 GKLYPVEILHSKE--RPTSYL-ESALKTAIDIHVREPEGDVLI-FMTGQDDIEKLVSKLE 234
G+ + V+ + ++ R T Y + LK + E + L + + Q++ K S+ +
Sbjct: 369 GRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQREEKQQSTLTEWYSAQENTFKPESQRQ 428
Query: 235 DKIRSLDE 242
+ ++ E
Sbjct: 429 RTVPNVTE 436
>UNIPROTKB|H9KZI9 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00575 PROSITE:PS00690
PROSITE:PS50126 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 EMBL:AADN02006936
Ensembl:ENSGALT00000013764 OMA:CRERERG Uniprot:H9KZI9
Length = 692
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 104/220 (47%), Positives = 146/220 (66%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXX 62
+LPI + +E + IGETGSGK+TQ++Q L GYT G IG TQP
Sbjct: 474 SLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAA 533
Query: 63 XXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+E G LG+EVGY IRFED TS T+IKY+TDG+LLRE L +PDL+ Y++I+
Sbjct: 534 MSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIM 593
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+++TD+L GL+K+ V R +K+++TSATLD K S++F P +PG+ Y
Sbjct: 594 LDEAHERTIHTDVLFGLLKKTVQKRQD-MKLIVTSATLDAVKFSQYFYEAPIFTIPGRTY 652
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTG 222
PVEIL++KE T YL+++L T + IH+ EP G+ ++ + G
Sbjct: 653 PVEILYTKEPETDYLDASLITVMQIHLTEPPGEWIVMIHG 692
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 308 (113.5 bits), Expect = 1.2e-51, Sum P(2) = 1.2e-51
Identities = 83/217 (38%), Positives = 122/217 (56%)
Query: 214 GDVLIFMTGQDDIEKLVSKL--EDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPP 271
G VLIF+ G D+I L ++ +DK R D S + LH ++ Q +V PP
Sbjct: 623 GAVLIFLPGYDEIVGLRDRILFDDK-RFAD--STHRYQVFMLHSNMQTSDQKKVLKNPPA 679
Query: 272 NCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGR 331
R+ I+STNIAETS+TV+ VV+VID G VK++ ++ + + L +V ISK A QR GR
Sbjct: 680 GVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGR 739
Query: 332 AGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFL-- 389
AGR RPG C+RL+ S + L+ PE+ R L L+ K L + +N DFL
Sbjct: 740 AGRCRPGICFRLF-SRLRFQNMLEFQTPELLRMPLQELCLHTKLL--APVNCPIADFLMK 796
Query: 390 --DPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
+PP + + +A++ L IDA+D +T +G +A
Sbjct: 797 APEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLA 833
Score = 273 (101.2 bits), Expect = 1.2e-51, Sum P(2) = 1.2e-51
Identities = 76/254 (29%), Positives = 131/254 (51%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI---IGVTQPXX 59
+LP+ + +E I +GETGSGK+TQ+ Q L + K+GI I TQP
Sbjct: 192 SLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQPRR 250
Query: 60 XXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPD-LSPY 118
E R+G+ +GY IR E R S +TL+ + T+GVLLR +++ LS
Sbjct: 251 LAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLSTV 310
Query: 119 SVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVP 178
+ +I+DE HER +D LL ++ L+ + LK++++SA LD ++F +CP + +
Sbjct: 311 THVIVDEVHERDRFSDFLLTKLRDLLQKHPT-LKLILSSAALDVNLFIRYFGSCPVIYIQ 369
Query: 179 GKLYPVEILHSKE--RPTSYL-ESALKTAIDIHVREPEGDVLI-FMTGQDDIEKLVSKLE 234
G+ + V+ + ++ R T Y + LK + E + L + + Q++ K S+ +
Sbjct: 370 GRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQQEEKQQTTLTEWYSAQENSFKPESQRQ 429
Query: 235 DKIRSL-DEGSCMD 247
+ ++ DE +D
Sbjct: 430 RTVLNVTDEYDLLD 443
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 307 (113.1 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
Identities = 79/215 (36%), Positives = 120/215 (55%)
Query: 214 GDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNC 273
G +LIF+ G D+I L ++ + E + V + LH ++ Q +V PP
Sbjct: 622 GAILIFLPGYDEIVGLRDRILFDDKRFAENAHRYQVFM-LHSNMQTSDQKKVLKNPPAGV 680
Query: 274 RRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAG 333
R+ I+STNIAETS+TV+ VV+VID G VK++ ++ + + L +V ISK A QR GRAG
Sbjct: 681 RKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAG 740
Query: 334 RTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFL---- 389
R RPG C+RL+ S + L+ PE+ R L L+ K L + +N DFL
Sbjct: 741 RCRPGICFRLF-SRLRFQNMLEFQTPELLRMPLQELCLHTKLL--APVNCAIADFLMKAP 797
Query: 390 DPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
+PP + + +A++ L IDA+D +T +G +A
Sbjct: 798 EPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLA 832
Score = 271 (100.5 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
Identities = 66/200 (33%), Positives = 108/200 (54%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI---IGVTQPXX 59
+LP+ + +E I +GETGSGK+TQ+ Q L + K+GI I TQP
Sbjct: 191 SLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQPRR 249
Query: 60 XXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPD-LSPY 118
E R+G+ +GY IR E R S +TL+ + T+GVLLR +++ LS
Sbjct: 250 LAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLSTV 309
Query: 119 SVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVP 178
+ +I+DE HER +D LL ++ L+ + LK++++SA LD ++F +CP + +
Sbjct: 310 THVIVDEVHERDRFSDFLLTKLRDLLQKHPT-LKLILSSAALDVNLFIRYFGSCPVIYIQ 368
Query: 179 GKLYPVEILHSKE--RPTSY 196
G+ + V+ + ++ R T Y
Sbjct: 369 GRPFEVKEMFLEDILRTTGY 388
Score = 39 (18.8 bits), Expect = 5.0e-20, Sum P(2) = 5.0e-20
Identities = 12/63 (19%), Positives = 28/63 (44%)
Query: 194 TSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPL 253
+S +E + ++H + G + + ++V LE SL+ G+ ++ ++
Sbjct: 519 SSQVEQLISMGANVHSKASNGWMALDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVQT 578
Query: 254 HGS 256
GS
Sbjct: 579 SGS 581
>GENEDB_PFALCIPARUM|MAL13P1.14 [details] [associations]
symbol:MAL13P1.14 "ATP-dependent DEAD box
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AL844509
KO:K01509 RefSeq:XP_001349754.1 ProteinModelPortal:Q8IET8
IntAct:Q8IET8 MINT:MINT-1557718 EnsemblProtists:MAL13P1.14:mRNA
GeneID:813690 KEGG:pfa:MAL13P1.14 EuPathDB:PlasmoDB:PF3D7_1302700
HOGENOM:HOG000280744 OMA:HERSINM ProtClustDB:CLSZ2515444
Uniprot:Q8IET8
Length = 1566
Score = 374 (136.7 bits), Expect = 3.6e-51, Sum P(2) = 3.6e-51
Identities = 91/249 (36%), Positives = 139/249 (55%)
Query: 2 ANLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPXXX 60
A+LP+L YE+ + G+TG GKSTQ+ Q L+ +G+T + IG+TQP
Sbjct: 456 ASLPVLDYEQELIEAVLNYDVVFVNGDTGCGKSTQVPQFLYEYGFTSNDYFIGITQPRKI 515
Query: 61 XXXXXXXXXXQELGVRLGEEV-GYAIRFEDRTS-ERTLIKYLTDGVLLREILSNPDLSPY 118
EL EE+ GY IRFE + + IK +T+G+LL+EI+S+ LS Y
Sbjct: 516 AVKSICNRLNDELN----EEICGYQIRFEKSYFLKHSKIKVMTEGILLKEIMSDFILSKY 571
Query: 119 SVIILDEAHERSLNTDILLGLVKRLVNLRASK----------LKILITSATLDGEKV--S 166
SVIILDEAHERS+N DI++G++ + +R +KI+I SAT++ + +
Sbjct: 572 SVIILDEAHERSINMDIIIGILSIISKIRNDNYYNFKSDIIPIKIIIMSATINDNNLFQN 631
Query: 167 KFFSNCPTLNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDI 226
K F N T+N+P + V P Y+E A + I IH + P+G +L+F+T Q++I
Sbjct: 632 KIFQNFTTVNIPTQKVQVIDHFLSYTPKDYVEEAKRKIIQIHKKLPQGSILVFLTSQEEI 691
Query: 227 EKLVSKLED 235
+L + L +
Sbjct: 692 YRLYNMLSN 700
Score = 203 (76.5 bits), Expect = 3.6e-51, Sum P(2) = 3.6e-51
Identities = 62/178 (34%), Positives = 88/178 (49%)
Query: 250 ILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPS 309
+ L+ LP + Q+ +F P N R I+STNIAETSLT+ + YVIDCG K++ Y+
Sbjct: 884 VFKLYSKLPMKDQMELFHNPKENERVCILSTNIAETSLTLPNIRYVIDCGKEKRKIYSNL 943
Query: 310 SGMYSLDVVQ-ISKVQANQRVGRAGR----------------TRPGKCYRLYPSTVYHDE 352
+ YS ++ ISK A QR GRAGR G Y+LY S Y+
Sbjct: 944 ND-YSYYIIDNISKCSAIQRKGRAGRILYLLKKNKKNKKKMENEKGHVYKLYSSNYYNYF 1002
Query: 353 FLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI 410
F + I L +LYL S ++ NV F F++ P +A K+L ++ I
Sbjct: 1003 FKNDNDYPILNYPLDSLILYLLSFNIK--NVENFPFINKPDKSKFIEAKKRLIYLNCI 1058
>UNIPROTKB|Q8IET8 [details] [associations]
symbol:MAL13P1.14 "ATP dependent DEAD-box helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AL844509
KO:K01509 RefSeq:XP_001349754.1 ProteinModelPortal:Q8IET8
IntAct:Q8IET8 MINT:MINT-1557718 EnsemblProtists:MAL13P1.14:mRNA
GeneID:813690 KEGG:pfa:MAL13P1.14 EuPathDB:PlasmoDB:PF3D7_1302700
HOGENOM:HOG000280744 OMA:HERSINM ProtClustDB:CLSZ2515444
Uniprot:Q8IET8
Length = 1566
Score = 374 (136.7 bits), Expect = 3.6e-51, Sum P(2) = 3.6e-51
Identities = 91/249 (36%), Positives = 139/249 (55%)
Query: 2 ANLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPXXX 60
A+LP+L YE+ + G+TG GKSTQ+ Q L+ +G+T + IG+TQP
Sbjct: 456 ASLPVLDYEQELIEAVLNYDVVFVNGDTGCGKSTQVPQFLYEYGFTSNDYFIGITQPRKI 515
Query: 61 XXXXXXXXXXQELGVRLGEEV-GYAIRFEDRTS-ERTLIKYLTDGVLLREILSNPDLSPY 118
EL EE+ GY IRFE + + IK +T+G+LL+EI+S+ LS Y
Sbjct: 516 AVKSICNRLNDELN----EEICGYQIRFEKSYFLKHSKIKVMTEGILLKEIMSDFILSKY 571
Query: 119 SVIILDEAHERSLNTDILLGLVKRLVNLRASK----------LKILITSATLDGEKV--S 166
SVIILDEAHERS+N DI++G++ + +R +KI+I SAT++ + +
Sbjct: 572 SVIILDEAHERSINMDIIIGILSIISKIRNDNYYNFKSDIIPIKIIIMSATINDNNLFQN 631
Query: 167 KFFSNCPTLNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDI 226
K F N T+N+P + V P Y+E A + I IH + P+G +L+F+T Q++I
Sbjct: 632 KIFQNFTTVNIPTQKVQVIDHFLSYTPKDYVEEAKRKIIQIHKKLPQGSILVFLTSQEEI 691
Query: 227 EKLVSKLED 235
+L + L +
Sbjct: 692 YRLYNMLSN 700
Score = 203 (76.5 bits), Expect = 3.6e-51, Sum P(2) = 3.6e-51
Identities = 62/178 (34%), Positives = 88/178 (49%)
Query: 250 ILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPS 309
+ L+ LP + Q+ +F P N R I+STNIAETSLT+ + YVIDCG K++ Y+
Sbjct: 884 VFKLYSKLPMKDQMELFHNPKENERVCILSTNIAETSLTLPNIRYVIDCGKEKRKIYSNL 943
Query: 310 SGMYSLDVVQ-ISKVQANQRVGRAGR----------------TRPGKCYRLYPSTVYHDE 352
+ YS ++ ISK A QR GRAGR G Y+LY S Y+
Sbjct: 944 ND-YSYYIIDNISKCSAIQRKGRAGRILYLLKKNKKNKKKMENEKGHVYKLYSSNYYNYF 1002
Query: 353 FLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI 410
F + I L +LYL S ++ NV F F++ P +A K+L ++ I
Sbjct: 1003 FKNDNDYPILNYPLDSLILYLLSFNIK--NVENFPFINKPDKSKFIEAKKRLIYLNCI 1058
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 337 (123.7 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 80/212 (37%), Positives = 113/212 (53%)
Query: 213 EGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPN 272
EG +LIF+ G +I L+ L R G D +LPLH S+ Q +VF PP
Sbjct: 915 EGAILIFLPGVAEIYMLLDMLAASYRF--RGPAADW-LLPLHSSIASSEQRKVFLRPPKG 971
Query: 273 CRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRA 332
R+ I +TNIAETS+T+D VVYVID G K+ +YNP + S+ IS+ A QR GRA
Sbjct: 972 LRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQANARQRTGRA 1031
Query: 333 GRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPP 392
GR +PG C+ LY + VPE+ R L L +K L L I L+PP
Sbjct: 1032 GRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKLLGLGHIKPFLSRALEPP 1091
Query: 393 SSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
S ++ A+ L+ + A++ + +T +G +A
Sbjct: 1092 SEGAMTSAISLLHEVGAVEGDEELTPLGHHLA 1123
Score = 233 (87.1 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 71/233 (30%), Positives = 110/233 (47%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQIL------HRHGYTKSGIIGVTQP 57
LPI + + I GETGSGK+TQ+ Q + HG II TQP
Sbjct: 614 LPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHG-GYCNII-CTQP 671
Query: 58 XXXXXXXXXXXXXQEL---GVRLGEE-VGYAIRFEDRTSERTLIKYLTDGVLLREILSNP 113
E L + VGY +R E S++T + + T G+LLR++ +
Sbjct: 672 RRIAAISVAQRVADERCESSPGLDDSLVGYQVRLESARSDKTRLLFCTTGILLRKLAGDR 731
Query: 114 DLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRAS-----KLKILITSATLDGEKVSKF 168
L+ + II+DE HERSL D LL ++K L+ ++ KLK+++ SAT+D + S++
Sbjct: 732 TLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSRKLKVILMSATVDADLFSRY 791
Query: 169 FSNCPTLNVPGKLYPV--EILHSKERPTSYL---ESALKTAIDIHVREPEGDV 216
F +CP + G+ +PV L +YL +S D +++ G V
Sbjct: 792 FGHCPVITAQGRTHPVTTHFLEEIYESINYLLAPDSPAALRSDTSIKDKLGSV 844
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 301 (111.0 bits), Expect = 7.0e-50, Sum P(2) = 7.0e-50
Identities = 80/215 (37%), Positives = 120/215 (55%)
Query: 216 VLIFMTGQDDIEKLVSKL--EDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNC 273
+LIF+ G D+I L ++ +DK R D + LH ++ Q +V PP
Sbjct: 625 ILIFLPGYDEIVGLRDRILFDDK-RFADNTHRYQ--VFMLHSNMQTSDQKKVLKNPPAGV 681
Query: 274 RRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAG 333
R+ I+STNIAETS+TV+ VV+VID G VK++ ++ + + L +V ISK A QR GRAG
Sbjct: 682 RKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRKGRAG 741
Query: 334 RTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFL---- 389
R RPG C+RL+ S + L+ PE+ R L L+ K L + +N DFL
Sbjct: 742 RCRPGICFRLF-SRLRFQNMLEFQTPELLRMPLQELCLHTKLL--APVNCPIADFLMKAP 798
Query: 390 DPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
+PP + + +A++ L IDA+D +T +G +A
Sbjct: 799 EPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLA 833
Score = 263 (97.6 bits), Expect = 7.0e-50, Sum P(2) = 7.0e-50
Identities = 74/249 (29%), Positives = 128/249 (51%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI---IGVTQPXX 59
+LP+ + +E I +GETGSGK+TQ+ Q L + K+GI I TQP
Sbjct: 191 SLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCF-KNGIPCRIFCTQPRR 249
Query: 60 XXXXXXXXXXXQELGVRLGEEVGYAIRFEDR-TSERTLIKYLTDGVLLREILSNPD-LSP 117
E R+G+ +GY IR E R S +TL+ + T+GVLLR +++ LS
Sbjct: 250 LAAIAVAERVAAERRERIGQTIGYQIRLESRRVSPKTLLTFCTNGVLLRTLMAGDSTLST 309
Query: 118 YSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNV 177
+ +I+DE HER +D LL ++ L+ + LK++++SA LD ++F +CP + +
Sbjct: 310 VTHVIVDEVHERDRFSDFLLTKLRDLLQKHPT-LKLILSSAALDVNLFIRYFGSCPVIYI 368
Query: 178 PGKLYPVEILHSKE--RPTSYL-ESALKTAIDIHVREPEGDVLI-FMTGQDDIEKLVSKL 233
G+ + V+ + ++ R T Y + LK + E + L + + Q++ K S+
Sbjct: 369 QGRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQREEKQQSTLTEWYSAQENTFKPESQR 428
Query: 234 EDKIRSLDE 242
+ + ++ E
Sbjct: 429 QRTVPNVTE 437
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 285 (105.4 bits), Expect = 1.3e-48, Sum P(3) = 1.3e-48
Identities = 60/161 (37%), Positives = 96/161 (59%)
Query: 264 RVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKV 323
+VF PP R+ +++TNIAETS+T+D VVYVID G +K+ ++ + + ++ +SK
Sbjct: 521 QVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKA 580
Query: 324 QANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINV 383
A QR GRAGR +PG CY LY + + D +PEI R+ L L +K L L I
Sbjct: 581 NAKQRKGRAGRVQPGHCYHLY-NGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAY 639
Query: 384 LKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
+DPPS+E++ +++ L ++A+D+ +T +G +A
Sbjct: 640 FLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLA 680
Score = 275 (101.9 bits), Expect = 1.3e-48, Sum P(3) = 1.3e-48
Identities = 66/165 (40%), Positives = 95/165 (57%)
Query: 27 GETGSGKSTQLSQ-ILHRH---GYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGE--E 80
GETG GK+TQ++Q IL + G + I TQP E G
Sbjct: 230 GETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGSGNS 289
Query: 81 VGYAIRFEDRTSERT-LIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGL 139
GY IR + R + I Y T G++L+ + S+P LS S I+LDE HER+L +D+L+ +
Sbjct: 290 TGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTV 349
Query: 140 VKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPV 184
VK L+N R S LK+++ SATL+ EK S++F NCP +++PG +PV
Sbjct: 350 VKDLLNFR-SDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV 393
Score = 48 (22.0 bits), Expect = 1.3e-48, Sum P(3) = 1.3e-48
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 207 IHVREPEGDVLIFMTGQDDIEKLVSKLEDKI 237
I + E +G +L+F+ G D+I L L ++
Sbjct: 482 IVLEEEDGAILVFLPGWDNISTLHDLLMSQV 512
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 291 (107.5 bits), Expect = 1.4e-48, Sum P(3) = 1.4e-48
Identities = 61/161 (37%), Positives = 95/161 (59%)
Query: 264 RVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKV 323
+VF PP R+ +++TNIAETS+T+D VVYVID G +K+ ++ + + ++ +SK
Sbjct: 515 QVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKA 574
Query: 324 QANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINV 383
A QR GRAGR +PG CY LY + + D +PEI R+ L L +K L L I
Sbjct: 575 NAKQRKGRAGRVQPGHCYHLY-NGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAY 633
Query: 384 LKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
+DPPS E++ ++K L ++A+D+ +T +G +A
Sbjct: 634 FLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLA 674
Score = 262 (97.3 bits), Expect = 1.4e-48, Sum P(3) = 1.4e-48
Identities = 63/165 (38%), Positives = 93/165 (56%)
Query: 27 GETGSGKSTQLSQ-ILHRH---GYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGE--E 80
GETG GK+TQ++Q IL + G + I TQP E G
Sbjct: 224 GETGCGKTTQVTQFILDDYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNS 283
Query: 81 VGYAIRFEDRTSERT-LIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGL 139
GY IR + R + I Y T G++L+ + S+ LS S I+LDE HER+L +D+L+ +
Sbjct: 284 TGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTV 343
Query: 140 VKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPV 184
+K L+N R LK+++ SATL+ EK S++F NCP +++PG +PV
Sbjct: 344 IKDLLNFRPD-LKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPV 387
Score = 48 (22.0 bits), Expect = 1.4e-48, Sum P(3) = 1.4e-48
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 207 IHVREPEGDVLIFMTGQDDIEKLVSKLEDKI 237
I + E +G +L+F+ G D+I L L ++
Sbjct: 476 IVLEEEDGAILVFLPGWDNISTLHDLLMSQV 506
>UNIPROTKB|Q68FK8 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase A-like protein"
species:8355 "Xenopus laevis" [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:1660
HOVERGEN:HBG039429 KO:K13184 GO:GO:0070937 EMBL:BC079701
RefSeq:NP_001087383.1 UniGene:Xl.55621 ProteinModelPortal:Q68FK8
SMR:Q68FK8 PRIDE:Q68FK8 GeneID:447207 KEGG:xla:447207
Xenbase:XB-GENE-967780 Uniprot:Q68FK8
Length = 1262
Score = 316 (116.3 bits), Expect = 1.5e-48, Sum P(2) = 1.5e-48
Identities = 86/238 (36%), Positives = 121/238 (50%)
Query: 187 LHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCM 246
L KE P +E+ LK ++V P G VL+F+ G + I + LE C
Sbjct: 629 LSEKETPLELIEALLKYIETLNV--P-GAVLVFLPGWNLIYAMQKHLEMNPHFGSHSYC- 684
Query: 247 DAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQY 306
ILPLH +P + Q +VF P P + I+STNIAETS+T++ VVYVID K + +
Sbjct: 685 ---ILPLHSQIPRDEQRKVFDPVPDGIIKVILSTNIAETSITINDVVYVIDSCKQKVKLF 741
Query: 307 NPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSL 366
+ M + V SK QR GRAGR RPG C+ L S D+ PEI R+ L
Sbjct: 742 TSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLC-SKARFDKLETHLTPEIFRTPL 800
Query: 367 AGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
L +K L L I ++PP +++ +A L +DA+D N +T +GR +A
Sbjct: 801 HEVALSIKLLRLGGIGHFLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGRILA 858
Score = 234 (87.4 bits), Expect = 1.5e-48, Sum P(2) = 1.5e-48
Identities = 60/188 (31%), Positives = 97/188 (51%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQ-ILH---RHGYTKSGIIGVTQPX 58
+LP+ ++EE I G TG GK+TQ+ Q IL R+ I VTQP
Sbjct: 389 SLPVKKFEEEIMHAVHNSPVVIIRGATGCGKTTQVPQYILDEYIRNDRAAQCNIVVTQPR 448
Query: 59 XXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSE-RTLIKYLTDGVLLREILSNPDLSP 117
E G +G+ GY++RFE + + T GVLLR++ S +
Sbjct: 449 RISAVSVAERVAFERGEEIGKSCGYSVRFESVLPRPHASMLFCTVGVLLRKLESG--IRG 506
Query: 118 YSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNV 177
S +I+DE HER +NTD LL +++ ++ ++++++ SAT+D ++F NCP + V
Sbjct: 507 ISHVIVDEIHERDINTDFLLVVLRDVIQA-FPEIRVILMSATIDTSMFCEYFFNCPIIEV 565
Query: 178 PGKLYPVE 185
G+ +PV+
Sbjct: 566 FGRTFPVQ 573
>MGI|MGI:2141813 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
MGI:MGI:2141813 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0004386 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
ChiTaRS:DHX32 EMBL:AY065980 EMBL:AK033624 EMBL:AK169005
EMBL:AK172504 EMBL:BC006911 EMBL:BC022920 IPI:IPI00127679
IPI:IPI00830523 RefSeq:NP_598702.1 UniGene:Mm.199223
ProteinModelPortal:Q8BZS9 SMR:Q8BZS9 PaxDb:Q8BZS9 PRIDE:Q8BZS9
Ensembl:ENSMUST00000033290 Ensembl:ENSMUST00000063669 GeneID:101437
KEGG:mmu:101437 UCSC:uc009kdj.1 InParanoid:Q8BZS9 NextBio:354922
Bgee:Q8BZS9 CleanEx:MM_DHX32 Genevestigator:Q8BZS9 Uniprot:Q8BZS9
Length = 744
Score = 507 (183.5 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 130/410 (31%), Positives = 219/410 (53%)
Query: 27 GETGSGKSTQLSQ-----ILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEV 81
G++ GKS+Q+ Q L H Y G+I TQ E+ V +G EV
Sbjct: 85 GDSKCGKSSQVPQWCAEYCLSIH-YQHGGVI-CTQAHKQTAVQLALRVADEMDVNIGHEV 142
Query: 82 GYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVK 141
GY I FE+ + T+++Y TD +L RE++SNP L Y VIILD+ HERSL TD+LLGL+K
Sbjct: 143 GYVIPFENCCTTETILRYCTDDMLQREMMSNPFLGSYGVIILDDVHERSLATDVLLGLLK 202
Query: 142 RLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERPTSYLESAL 201
++ L +LK+++ + L K+S ++ + P + V K +PVE+++ ES +
Sbjct: 203 DVL-LARPELKLIVNCSPLLTSKLSSYYGDVPVIEVRNK-HPVEVVYLSGAQKDSFESVI 260
Query: 202 KTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEM 261
+ +IH +GDV++F+ + DIEK + + +L+ D V++PL+ P+
Sbjct: 261 RLIFEIHRSGEKGDVVVFLACEQDIEKTYELVCQEGSNLNP-DVGDLVVIPLY----PKE 315
Query: 262 QVRVFSP---PPPNC----RRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYS 314
+ +F P C RR +++T+ E+ + V +VID G +++ YNP S
Sbjct: 316 KCSLFRPVDETEKRCQVYQRRVVLTTSCGESLIWSHTVKFVIDVGLERRQVYNPRIRANS 375
Query: 315 LDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLK 374
L + IS+ QA R G + GK + LY + + E+Q ++L VL++K
Sbjct: 376 LVLQPISQSQAEIRKQLLGSSPSGKLFCLYTEEFASKDMRPLKPAEMQEANLTSMVLFMK 435
Query: 375 SLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
+D++ + + DF++ P+ ESL AL+ L + A+D +G+++ G M+
Sbjct: 436 RVDIAGLG--RCDFMNRPAPESLMQALEDLDYLAALDNDGNLSEFGIIMS 483
>UNIPROTKB|J3KSW6 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002464
InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 Ensembl:ENST00000580030 Uniprot:J3KSW6
Length = 268
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 101/234 (43%), Positives = 150/234 (64%)
Query: 5 PILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXX 64
PI + + I G TGSGK+TQL + L+ G+++ G+IGVTQP
Sbjct: 34 PIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAIS 93
Query: 65 XXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILD 124
+E+ LG +VGY +RF+D +S+ T IKY+TDG LL+ IL +P+L+ +SVIILD
Sbjct: 94 VAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILD 153
Query: 125 EAHERSLNTDILLGLVKRLVNL----RASKLKILITSATLDGEKVSKFFSNCPTLNVPGK 180
EAHER+L TDIL GL+K+L R LK+++ SAT++ K+S FF NCP ++PG+
Sbjct: 154 EAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGR 213
Query: 181 LYPVE-----ILHSKERP-TSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEK 228
LYPV ++ ++R T+Y+++ +K +DIH+ E GD+L+F+TGQ +IEK
Sbjct: 214 LYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEK 267
>MGI|MGI:108177 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001085 "RNA polymerase II transcription factor
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0034605 "cellular response to heat"
evidence=IDA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=ISO] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISO] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 MGI:MGI:108177 GO:GO:0005524
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 GO:GO:0007623
Gene3D:3.30.160.20 GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063 CTD:1660
HOVERGEN:HBG039429 KO:K13184 OrthoDB:EOG4HHP1J GO:GO:0070937
EMBL:U91922 EMBL:AF023530 EMBL:AY512925 EMBL:BC089159 EMBL:AK013423
EMBL:U92080 IPI:IPI00339468 IPI:IPI00607914 IPI:IPI00875791
RefSeq:NP_031868.2 UniGene:Mm.20000 PDB:1UIL PDB:1WHQ PDB:2RS6
PDB:2RS7 PDBsum:1UIL PDBsum:1WHQ PDBsum:2RS6 PDBsum:2RS7
ProteinModelPortal:O70133 SMR:O70133 IntAct:O70133 STRING:O70133
PhosphoSite:O70133 PaxDb:O70133 PRIDE:O70133 GeneID:13211
KEGG:mmu:13211 UCSC:uc007czy.1 InParanoid:O70133 ChiTaRS:DHX9
EvolutionaryTrace:O70133 NextBio:283382 CleanEx:MM_DHX9
Genevestigator:O70133 GermOnline:ENSMUSG00000042699 Uniprot:O70133
Length = 1380
Score = 316 (116.3 bits), Expect = 6.7e-48, Sum P(2) = 6.7e-48
Identities = 87/238 (36%), Positives = 123/238 (51%)
Query: 187 LHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCM 246
L+ KE P +E+ LK ++V P G VL+F+ G + I + LE+ GS
Sbjct: 629 LNEKETPFELIEALLKYIETLNV--P-GAVLVFLPGWNLIYTMQKHLENNSHF---GSHR 682
Query: 247 DAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQY 306
ILPLH +P E Q +VF P P + I+STNIAETS+T++ VVYVID K + +
Sbjct: 683 YQ-ILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLF 741
Query: 307 NPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSL 366
+ M + V SK QR GRAGR RPG C+ L S D PE+ R+ L
Sbjct: 742 TAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLC-SRARFDRLETHMTPEMFRTPL 800
Query: 367 AGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
L +K L L I ++PP +++ +A L +DA+D N +T +GR +A
Sbjct: 801 HEIALSIKLLRLGGIGQFLAKAIEPPPLDAIIEAEHTLRELDALDANDELTPLGRILA 858
Score = 229 (85.7 bits), Expect = 6.7e-48, Sum P(2) = 6.7e-48
Identities = 63/187 (33%), Positives = 94/187 (50%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQ-ILH---RHGYTKSGIIGVTQPXX 59
LP+ ++E I G TG GK+TQ+ Q IL ++ I VTQP
Sbjct: 390 LPVKKFEAEILEAISSNSVVIIRGATGCGKTTQVPQYILDDFIQNDRAAECNIVVTQPRR 449
Query: 60 XXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSE-RTLIKYLTDGVLLREILSNPDLSPY 118
E G G+ GY++RFE I + T GVLLR++ + +
Sbjct: 450 ISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAG--IRGI 507
Query: 119 SVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVP 178
S +I+DE HER +NTD LL +V R V L +++I++ SAT+D ++F NCP + V
Sbjct: 508 SHVIVDEIHERDINTDFLL-VVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVY 566
Query: 179 GKLYPVE 185
G+ +PV+
Sbjct: 567 GRTFPVQ 573
>RGD|1308548 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10116 "Rattus norvegicus" [GO:0001085 "RNA polymerase II
transcription factor binding" evidence=IEA;ISO] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007623 "circadian rhythm" evidence=IEA;ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA;ISO]
[GO:0034605 "cellular response to heat" evidence=IEA;ISO]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IEA;ISO]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IEA;ISO]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 RGD:1308548 GO:GO:0005524 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 OrthoDB:EOG4HHP1J
EMBL:CH473958 IPI:IPI00947663 RefSeq:NP_001100654.1
UniGene:Rn.107359 Ensembl:ENSRNOT00000064860 GeneID:304859
KEGG:rno:304859 UCSC:RGD:1308548 NextBio:653729 Uniprot:D4A9D6
Length = 1174
Score = 315 (115.9 bits), Expect = 6.8e-48, Sum P(2) = 6.8e-48
Identities = 87/238 (36%), Positives = 123/238 (51%)
Query: 187 LHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCM 246
L+ KE P +E+ LK ++V P G VL+F+ G + I + LE+ GS
Sbjct: 630 LNEKETPFELIEALLKYIETLNV--P-GAVLVFLPGWNLIYTMQKHLENNSHF---GSHR 683
Query: 247 DAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQY 306
ILPLH +P E Q +VF P P + I+STNIAETS+T++ VVYVID K + +
Sbjct: 684 YQ-ILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLF 742
Query: 307 NPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSL 366
+ M + V SK QR GRAGR RPG C+ L S D PE+ R+ L
Sbjct: 743 TAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLC-SRARFDRLETHMTPEMFRTPL 801
Query: 367 AGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
L +K L L I ++PP +++ +A L +DA+D N +T +GR +A
Sbjct: 802 HEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILA 859
Score = 228 (85.3 bits), Expect = 6.8e-48, Sum P(2) = 6.8e-48
Identities = 63/187 (33%), Positives = 94/187 (50%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQ-ILH---RHGYTKSGIIGVTQPXX 59
LP+ ++E I G TG GK+TQ+ Q IL ++ I VTQP
Sbjct: 391 LPVKKFEAEILEAISQNSVVIIRGATGCGKTTQVPQYILDDFIQNDRAAECNIVVTQPRR 450
Query: 60 XXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSE-RTLIKYLTDGVLLREILSNPDLSPY 118
E G G+ GY++RFE I + T GVLLR++ + +
Sbjct: 451 ISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAG--IRGI 508
Query: 119 SVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVP 178
S +I+DE HER +NTD LL +V R V L +++I++ SAT+D ++F NCP + V
Sbjct: 509 SHVIVDEIHERDINTDFLL-VVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVY 567
Query: 179 GKLYPVE 185
G+ +PV+
Sbjct: 568 GRTFPVQ 574
>UNIPROTKB|Q7L7V1 [details] [associations]
symbol:DHX32 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX32" species:9606 "Homo sapiens"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 PROSITE:PS51194 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 EMBL:CH471066 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 EMBL:AY064247 EMBL:AL360176
UniGene:Hs.370292 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOVERGEN:HBG039428 EMBL:AF427340 EMBL:AF427341 EMBL:AY064250
EMBL:AK001556 EMBL:AK001751 EMBL:AK024869 EMBL:BC002473
EMBL:BC037925 EMBL:BC068471 EMBL:AL162051 IPI:IPI00334601
IPI:IPI00644447 PIR:T47184 RefSeq:NP_060650.2
ProteinModelPortal:Q7L7V1 SMR:Q7L7V1 IntAct:Q7L7V1 STRING:Q7L7V1
PhosphoSite:Q7L7V1 DMDM:74759011 PRIDE:Q7L7V1 DNASU:55760
Ensembl:ENST00000284688 Ensembl:ENST00000284690
Ensembl:ENST00000368721 Ensembl:ENST00000415732 GeneID:55760
KEGG:hsa:55760 UCSC:uc001lje.1 UCSC:uc001ljf.1 CTD:55760
GeneCards:GC10M127515 HGNC:HGNC:16717 HPA:HPA048872 MIM:607960
neXtProt:NX_Q7L7V1 PharmGKB:PA27219 InParanoid:Q7L7V1 OMA:LACEQDI
OrthoDB:EOG4N30NF PhylomeDB:Q7L7V1 ChiTaRS:DHX32 GenomeRNAi:55760
NextBio:60779 Bgee:Q7L7V1 Genevestigator:Q7L7V1 Uniprot:Q7L7V1
Length = 743
Score = 502 (181.8 bits), Expect = 8.7e-48, P = 8.7e-48
Identities = 131/411 (31%), Positives = 218/411 (53%)
Query: 27 GETGSGKSTQLSQ-----ILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEV 81
G+ GKS Q+ Q L H Y G+I TQ E+ V +G EV
Sbjct: 85 GDAKCGKSAQVPQWCAEYCLSIH-YQHGGVI-CTQVHKQTVVQLALRVADEMDVNIGHEV 142
Query: 82 GYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVK 141
GY I FE+ + T+++Y TD +L RE++SNP L Y VIILD+ HERS+ TD+LLGL+K
Sbjct: 143 GYVIPFENCCTNETILRYCTDDMLQREMMSNPFLGSYGVIILDDIHERSIATDVLLGLLK 202
Query: 142 RLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERPTSYLESAL 201
++ L +LK++I S+ K++ ++ N P + V K +PVE+++ E ES L
Sbjct: 203 DVL-LARPELKLIINSSPHLISKLNSYYGNVPVIEVKNK-HPVEVVYLSEAQKDSFESIL 260
Query: 202 KTAIDIHVREPEGDVLIFMTGQDDIEKLVSKL-EDKIRSLDEGSCMDAVILPLHGSLPPE 260
+ +IH +GD+++F+ + DIEK+ + + + D G + V++PL+ P+
Sbjct: 261 RLIFEIHHSGEKGDIVVFLACEQDIEKVCETVYQGSNLNPDLG---ELVVVPLY----PK 313
Query: 261 MQVRVFSP---PPPNC----RRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMY 313
+ +F P C RR +++T+ E + + V +VID G +++ YNP
Sbjct: 314 EKCSLFKPLDETEKRCQVYQRRVVLTTSSGEFLIWSNSVRFVIDVGVERRKVYNPRIRAN 373
Query: 314 SLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYL 373
SL + IS+ QA R G + GK + LY + + E+Q ++L VL++
Sbjct: 374 SLVMQPISQSQAEIRKQILGSSSSGKFFCLYTEEFASKDMTPLKPAEMQEANLTSMVLFM 433
Query: 374 KSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
K +D++ + DF++ P+ ESL AL+ L + A+D +G+++ G M+
Sbjct: 434 KRIDIAGLG--HCDFMNRPAPESLMQALEDLDYLAALDNDGNLSEFGIIMS 482
>WB|WBGene00021365 [details] [associations]
symbol:smgl-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0002119
GO:GO:0032940 GO:GO:0010171 GO:GO:0040011 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00700000104421 EMBL:FO081788 RefSeq:NP_500405.3
ProteinModelPortal:Q9N437 SMR:Q9N437 PaxDb:Q9N437
EnsemblMetazoa:Y37E11AM.1 GeneID:177135 KEGG:cel:CELE_Y37E11AM.1
UCSC:Y37E11AM.1 CTD:177135 WormBase:Y37E11AM.1 InParanoid:Q9N437
OMA:LRADVMC NextBio:895494 Uniprot:Q9N437
Length = 1018
Score = 507 (183.5 bits), Expect = 1.4e-47, P = 1.4e-47
Identities = 134/374 (35%), Positives = 205/374 (54%)
Query: 76 RLGEEVGYAIR---FEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLN 132
+L +E+ A R FE S++T + +LT+G+LLR++ + L Y+VIILDE HER L
Sbjct: 139 KLQKELPIAERAGEFETTKSQKTKLLFLTEGLLLRQMEKDSLLEKYNVIILDEVHERHLT 198
Query: 133 TDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEI------ 186
+D+L+GL++ L R LK+++ SAT++ + +F P + VPG+L+P+++
Sbjct: 199 SDLLIGLLRDLCTKR-DDLKLILMSATINLDLFKGYFEGAPVVQVPGRLFPIDVRWHPIK 257
Query: 187 --LHSKERPTSYL--ESALKTAIDIHVREPE---GDVLIFMTGQDDIEKLVSKLEDKIRS 239
+ ++ T + E LK I + P GD LIF+ G +I + L++
Sbjct: 258 QFIDQSDKKTHKIDPEPYLKILELIDKQFPSTQRGDALIFLNGVAEISMVAEHLKN-YAE 316
Query: 240 LDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCG 299
L G +IL LH +L E Q +VF P R+ I+STN+AETS+T+DG+ +VID G
Sbjct: 317 LTNGW----IILMLHSTLSVEEQDKVFDQAPVGIRKCILSTNVAETSVTIDGIRFVIDSG 372
Query: 300 YVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVP 359
V ++ P +G L +SK ANQR GRAGRT PG CYRLY + ++ D TV
Sbjct: 373 KVNLIKHEPGTGTQKLTEFWVSKASANQRKGRAGRTGPGICYRLYSQEQF-EKMDDFTVS 431
Query: 360 EIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI-DENGSITS 418
EI R SL L + SL+L ++ F F++ PS + L + L+ L + + G I +
Sbjct: 432 EINRVSLQEMALKMISLNLG-LDPRTFPFIEKPSEDVLNEGLEVLKFQRVLRSDRGDILT 490
Query: 419 IGRTMAGTSFFALP 432
+ T G LP
Sbjct: 491 L--TALGNMVSKLP 502
>UNIPROTKB|E2RNT3 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:AAEX03005146 EMBL:AAEX03005147
RefSeq:XP_537154.2 Ensembl:ENSCAFT00000020976 GeneID:480032
KEGG:cfa:480032 NextBio:20855120 Uniprot:E2RNT3
Length = 1276
Score = 314 (115.6 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47
Identities = 87/238 (36%), Positives = 125/238 (52%)
Query: 187 LHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCM 246
L+ KE P +E+ LK ++V P G VL+F+ G + I + LE + D GS
Sbjct: 628 LNEKETPFELIEALLKYIETLNV--P-GAVLVFLPGWNLIYTMQKHLE---MNPDFGSHR 681
Query: 247 DAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQY 306
ILPLH +P E Q +VF P P + I+STNIAETS+T++ VVYVID K + +
Sbjct: 682 YQ-ILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLF 740
Query: 307 NPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSL 366
+ M + V SK QR GRAGR RPG C+ L + +T PE+ R+ L
Sbjct: 741 TAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMT-PEMFRTPL 799
Query: 367 AGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
L +K L L I ++PP +++ +A L +DA+D N +T +GR +A
Sbjct: 800 HEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILA 857
Score = 227 (85.0 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47
Identities = 59/188 (31%), Positives = 93/188 (49%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQIL-----HRHGYTKSGIIGVTQPX 58
LP+ ++E I G TG GK+TQ+ Q + + I+ VTQP
Sbjct: 389 LPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIV-VTQPR 447
Query: 59 XXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSER-TLIKYLTDGVLLREILSNPDLSP 117
E G G+ GY++RFE I + T GVLLR++ + +
Sbjct: 448 RISAVSVAERVAYERGEEPGKSCGYSVRFESVLPRPYASIMFCTVGVLLRKLEAG--IRG 505
Query: 118 YSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNV 177
S +I+DE HER +NTD LL +++ +V +++I++ SAT+D ++F NCP + V
Sbjct: 506 ISHVIVDEIHERDINTDFLLVVLRDVVQAYP-EVRIVLMSATIDTSMFCEYFFNCPIIEV 564
Query: 178 PGKLYPVE 185
G+ YPV+
Sbjct: 565 YGRTYPVQ 572
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 309 (113.8 bits), Expect = 1.9e-47, Sum P(2) = 1.9e-47
Identities = 73/223 (32%), Positives = 124/223 (55%)
Query: 204 AID--IHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEM 261
AID + + + G +LIF+ G +I + L RSL+ C+ +LPLH SL +
Sbjct: 876 AIDNELSLAQKSGGILIFLPGVAEINRACGML----RSLN---CLH--VLPLHASLETKE 926
Query: 262 QVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQIS 321
Q +VF PPP R+ +V+TN+AETS+T+D ++ V+D G VK+ Y+ ++ M L+ S
Sbjct: 927 QRKVFVPPPSGKRKVVVATNVAETSITIDDIIVVVDTGKVKETSYDAANNMRRLEETFAS 986
Query: 322 KVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDI 381
QR GRAGR + G+CY+LY + + + PE++R L L ++++ ++D+
Sbjct: 987 LAACKQRRGRAGRVQAGECYKLYTRKL-ESQMAERPEPEMRRVPLEQLCLSVRAMGIADV 1045
Query: 382 NVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
PP + ++E A+ L + +D +T++GR +A
Sbjct: 1046 RGFLARAPTPPEAAAVEGAITMLRRMGCLDGE-ELTALGRQLA 1087
Score = 232 (86.7 bits), Expect = 1.9e-47, Sum P(2) = 1.9e-47
Identities = 63/174 (36%), Positives = 92/174 (52%)
Query: 27 GETGSGKSTQLSQI----LHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVG 82
GETGSGKSTQ Q L+ G + I VTQP E ++G+EVG
Sbjct: 656 GETGSGKSTQSVQFILDDLYGRGLGHAANILVTQPRRISALGLADRVSDERCSQVGQEVG 715
Query: 83 YAIRFEDRTSERTLIKYLTDGVLLREI-LSN-------PDLSPYSVIILDEAHERSLNTD 134
Y IR E RT +T I ++T GVLLR + +S L+ S +++DE HERSL+TD
Sbjct: 716 YIIRGESRTGPKTRITFVTTGVLLRRLQVSGGRVEDVVASLADVSHVVIDEVHERSLDTD 775
Query: 135 ILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSN----CPTLNVPGKLYPV 184
LL +++ ++ R LK+++ SATLD + +F + + G+ +PV
Sbjct: 776 FLLSIIRDVLKQRRD-LKLVLMSATLDSATFASYFVQDGIRVGQVEIAGRTFPV 828
>RGD|1311740 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10116 "Rattus norvegicus" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 SMART:SM00847
RGD:1311740 GO:GO:0004386 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
OrthoDB:EOG4N30NF EMBL:CH473953 IPI:IPI00366073
RefSeq:NP_001123511.1 UniGene:Rn.162500 Ensembl:ENSRNOT00000024655
GeneID:361667 KEGG:rno:361667 UCSC:RGD:1311740 NextBio:677165
Uniprot:D3ZGJ0
Length = 751
Score = 497 (180.0 bits), Expect = 3.7e-47, P = 3.7e-47
Identities = 130/410 (31%), Positives = 218/410 (53%)
Query: 27 GETGSGKSTQLSQ-----ILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEV 81
G++ GKS+Q+ Q L H Y G+I TQ E+ V +G EV
Sbjct: 92 GDSKCGKSSQVPQWCAEYCLSIH-YQHGGVI-CTQVHKQTAVQLALRVADEMDVNIGHEV 149
Query: 82 GYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVK 141
GY I FE+ + T+++Y TD +L RE++SNP L Y VIILD+ HERSL TD+LLGL+K
Sbjct: 150 GYVIPFENCCTTETILRYCTDDMLQREMMSNPFLGSYGVIILDDVHERSLATDVLLGLLK 209
Query: 142 RLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERPTSYLESAL 201
++ L +LK++I + ++S ++ N P L V K +PVE+++ ES +
Sbjct: 210 DVL-LARPELKLIINCSPFLISRLSSYYGNVPLLEVRNK-HPVEVVYLSGAQKDPFESVV 267
Query: 202 KTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEM 261
+ +IH +GDV++F+ + DIEK + + +L+ + V++PL+ P+
Sbjct: 268 RLIFEIHRSGEQGDVVVFLACEQDIEKTYEIVCQEGSNLNP-DVGELVVIPLY----PKE 322
Query: 262 QVRVFSP---PPPNC----RRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYS 314
+ +F P C RR +++T+ E+ + V +VID G +++ YNP S
Sbjct: 323 KCSLFRPVDETEKRCQASQRRVVLTTSCGESLIWSHTVRFVIDVGLERRQVYNPRIRANS 382
Query: 315 LDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLK 374
L + IS+ QA R G + GK + LY + + E+Q ++L VL++K
Sbjct: 383 LVLQPISQSQAEIRKQLLGSSPSGKLFCLYTEEFASKDMRPLKPAEMQEANLTSMVLFMK 442
Query: 375 SLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
+D++ + + DF++ P+ ESL AL+ L + A+D +G+++ G M+
Sbjct: 443 RVDIAGLG--RCDFMNRPAPESLMQALEDLDYLAALDNDGNLSEFGIIMS 490
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 504 (182.5 bits), Expect = 4.7e-47, P = 4.7e-47
Identities = 133/413 (32%), Positives = 221/413 (53%)
Query: 40 ILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERT-LIK 98
IL G + ++ +TQP QELG + + VGY +R E + R +
Sbjct: 520 ILEGRG-ARCNVV-ITQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALL 577
Query: 99 YLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSA 158
+ T G+LLR++ NP L S +++DE HER +NTD LL L+K + L L++++ SA
Sbjct: 578 FCTVGILLRKLQGNPSLEGVSHVVVDEVHERDVNTDFLLILLKGIQKLNPD-LRLVLMSA 636
Query: 159 TLDGEKVSKFFSNCPTLNVPGKLYPV------EILHS--KERPTSY----------LESA 200
T D ++ S +F +CP + VPG +YPV EIL + R Y L+
Sbjct: 637 TGDNQRFSHYFGDCPVVKVPGFMYPVKEYYLEEILAKLGRHRHRHYEIKQSDDECVLDLD 696
Query: 201 LKT----AIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGS 256
L T ID H EP G +L F+ G +I+ + +L + + S + ++LP+H +
Sbjct: 697 LITDLVLQIDAH-GEP-GGILCFLPGWQEIKGVQQRLLEMLGSQNSRY----LVLPVHSN 750
Query: 257 LPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLD 316
+P Q +F PPP R+ +++TNIAETS+T++ +V+V+D G K+ +Y+ + + L+
Sbjct: 751 IPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLE 810
Query: 317 VVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSL 376
V +SK QR GRAGR + G Y L+P + D+ VPEI R+ L V+ K +
Sbjct: 811 TVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRL-DKMPTYQVPEILRTPLENLVVQAK-I 868
Query: 377 DLSDINVLKF--DFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMAGTS 427
+ + ++F LD P +++++A+ L I +D+ ++T++G+ +A S
Sbjct: 869 HMPEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQIS 921
Score = 294 (108.6 bits), Expect = 1.0e-23, P = 1.0e-23
Identities = 66/194 (34%), Positives = 105/194 (54%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI-----IGVTQPX 58
LP+ +++TI G+TG GK+T++ Q+L H Y G + +TQP
Sbjct: 478 LPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEH-YILEGRGARCNVVITQPR 536
Query: 59 XXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERT-LIKYLTDGVLLREILSNPDLSP 117
QELG + + VGY +R E + R + + T G+LLR++ NP L
Sbjct: 537 RISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGNPSLEG 596
Query: 118 YSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNV 177
S +++DE HER +NTD LL L+K + L L++++ SAT D ++ S +F +CP + V
Sbjct: 597 VSHVVVDEVHERDVNTDFLLILLKGIQKLNPD-LRLVLMSATGDNQRFSHYFGDCPVVKV 655
Query: 178 PGKLYPVEILHSKE 191
PG +YPV+ + +E
Sbjct: 656 PGFMYPVKEYYLEE 669
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 503 (182.1 bits), Expect = 6.1e-47, P = 6.1e-47
Identities = 133/413 (32%), Positives = 220/413 (53%)
Query: 40 ILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERT-LIK 98
IL G + ++ +TQP QELG + + VGY +R E + R +
Sbjct: 520 ILEGRG-ARCNVV-ITQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALL 577
Query: 99 YLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSA 158
+ T G+LLR++ NP L S +++DE HER +NTD LL L+K + L L++++ SA
Sbjct: 578 FCTVGILLRKLQGNPSLEGVSHVVVDEVHERDVNTDFLLILLKGIQKLNPD-LRLVLMSA 636
Query: 159 TLDGEKVSKFFSNCPTLNVPGKLYPV------EILHS--KERPTSY----------LESA 200
T D ++ S +F CP + VPG +YPV EIL + R Y L+
Sbjct: 637 TGDNQRFSHYFGGCPVVKVPGFMYPVKEYYLEEILAKLGRHRHRHYEIKQSDDECVLDLD 696
Query: 201 LKT----AIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGS 256
L T ID H EP G +L F+ G +I+ + +L + + S + ++LP+H +
Sbjct: 697 LITDLVLQIDAH-GEP-GGILCFLPGWQEIKGVQQRLLEMLGSQNSRY----LVLPVHSN 750
Query: 257 LPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLD 316
+P Q +F PPP R+ +++TNIAETS+T++ +V+V+D G K+ +Y+ + + L+
Sbjct: 751 IPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLE 810
Query: 317 VVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSL 376
V +SK QR GRAGR + G Y L+P + D+ VPEI R+ L V+ K +
Sbjct: 811 TVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRL-DKMPTYQVPEILRTPLENLVVQAK-I 868
Query: 377 DLSDINVLKF--DFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMAGTS 427
+ + ++F LD P +++++A+ L I +D+ ++T++G+ +A S
Sbjct: 869 HMPEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQIS 921
Score = 293 (108.2 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 66/194 (34%), Positives = 104/194 (53%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI-----IGVTQPX 58
LP+ +++TI G+TG GK+T++ Q+L H Y G + +TQP
Sbjct: 478 LPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEH-YILEGRGARCNVVITQPR 536
Query: 59 XXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERT-LIKYLTDGVLLREILSNPDLSP 117
QELG + + VGY +R E + R + + T G+LLR++ NP L
Sbjct: 537 RISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGNPSLEG 596
Query: 118 YSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNV 177
S +++DE HER +NTD LL L+K + L L++++ SAT D ++ S +F CP + V
Sbjct: 597 VSHVVVDEVHERDVNTDFLLILLKGIQKLNPD-LRLVLMSATGDNQRFSHYFGGCPVVKV 655
Query: 178 PGKLYPVEILHSKE 191
PG +YPV+ + +E
Sbjct: 656 PGFMYPVKEYYLEE 669
>UNIPROTKB|I3LHZ6 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:DDWIRLQ
Ensembl:ENSSSCT00000025297 Uniprot:I3LHZ6
Length = 1274
Score = 308 (113.5 bits), Expect = 6.2e-47, Sum P(2) = 6.2e-47
Identities = 86/238 (36%), Positives = 123/238 (51%)
Query: 187 LHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCM 246
L+ KE P +E+ LK ++V P G VL+F+ G + I + LE + G+
Sbjct: 619 LNEKETPFELIEALLKYIETLNV--P-GAVLVFLPGWNLIYTMQKHLE---MNPHFGNHR 672
Query: 247 DAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQY 306
ILPLH +P E Q +VF P P + I+STNIAETS+T++ VVYVID K + +
Sbjct: 673 YQ-ILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLF 731
Query: 307 NPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSL 366
+ M + V SK QR GRAGR RPG C+ L S D PE+ R+ L
Sbjct: 732 TAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLC-SRARFDRLETHMTPEMFRTPL 790
Query: 367 AGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
L +K L L I ++PP +++ +A L +DA+D N +T +GR +A
Sbjct: 791 HEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILA 848
Score = 227 (85.0 bits), Expect = 6.2e-47, Sum P(2) = 6.2e-47
Identities = 59/188 (31%), Positives = 93/188 (49%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQIL-----HRHGYTKSGIIGVTQPX 58
LP+ ++E I G TG GK+TQ+ Q + + I+ VTQP
Sbjct: 384 LPVKKFESEILEAISQNPVVIVRGATGCGKTTQVPQFILDDFIQNDRAAECNIV-VTQPR 442
Query: 59 XXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSE-RTLIKYLTDGVLLREILSNPDLSP 117
E G G+ GY++RFE I + T GVLLR++ + +
Sbjct: 443 RISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAG--IRG 500
Query: 118 YSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNV 177
S +I+DE HER +NTD LL +++ +V +++I++ SAT+D ++F NCP + V
Sbjct: 501 ISHVIVDEIHERDINTDFLLVVLRDVVQAYP-EVRIVLMSATIDTSMFCEYFFNCPIIEV 559
Query: 178 PGKLYPVE 185
G+ YPV+
Sbjct: 560 YGRTYPVQ 567
>UNIPROTKB|Q5R874 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9601
"Pongo abelii" [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ GO:GO:0070934
EMBL:CR859880 RefSeq:XP_002809755.1 UniGene:Pab.8432
ProteinModelPortal:Q5R874 SMR:Q5R874 PRIDE:Q5R874
Ensembl:ENSPPYT00000000510 GeneID:100449914 KEGG:pon:100449914
InParanoid:Q5R874 Uniprot:Q5R874
Length = 1269
Score = 306 (112.8 bits), Expect = 9.9e-47, Sum P(2) = 9.9e-47
Identities = 86/238 (36%), Positives = 124/238 (52%)
Query: 187 LHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCM 246
L+ KE P +E+ LK ++V P G VL+F+ G + I + LE + GS
Sbjct: 627 LNEKETPFELIEALLKYIETLNV--P-GAVLVFLPGWNLIYTMQKHLE---MNPHFGSHR 680
Query: 247 DAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQY 306
ILPLH +P E Q +VF P P + I+STNIAETS+T++ VVYVID K + +
Sbjct: 681 YQ-ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLF 739
Query: 307 NPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSL 366
+ M + V SK QR GRAGR RPG C+ L + +T PE+ R+ L
Sbjct: 740 TAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMT-PEMFRTPL 798
Query: 367 AGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
L +K L L I ++PP +++ +A L +DA+D N +T +GR +A
Sbjct: 799 HEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILA 856
Score = 227 (85.0 bits), Expect = 9.9e-47, Sum P(2) = 9.9e-47
Identities = 59/188 (31%), Positives = 93/188 (49%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQIL-----HRHGYTKSGIIGVTQPX 58
LP+ ++E I G TG GK+TQ+ Q + + I+ VTQP
Sbjct: 388 LPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIV-VTQPR 446
Query: 59 XXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSE-RTLIKYLTDGVLLREILSNPDLSP 117
E G G+ GY++RFE I + T GVLLR++ + +
Sbjct: 447 RISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAG--IRG 504
Query: 118 YSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNV 177
S +I+DE HER +NTD LL +++ +V +++I++ SAT+D ++F NCP + V
Sbjct: 505 ISHVIVDEIHERDINTDFLLVVLRDVVQAYP-EVRIVLMSATIDTSMFCEYFFNCPIIEV 563
Query: 178 PGKLYPVE 185
G+ YPV+
Sbjct: 564 YGRTYPVQ 571
>UNIPROTKB|Q08211 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9606
"Homo sapiens" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0070937 "CRD-mediated mRNA stability
complex" evidence=IDA] [GO:0070934 "CRD-mediated mRNA
stabilization" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] Reactome:REACT_71 InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0034605
GO:GO:0005730 GO:GO:0003677 Reactome:REACT_1675 Gene3D:3.30.160.20
EMBL:CH471067 GO:GO:0030529 GO:GO:0003725 GO:GO:0004003
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000247063 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ EMBL:L13848 EMBL:U03643
EMBL:Y10658 EMBL:AB451248 EMBL:AB451372 EMBL:AL355999 EMBL:AL662837
EMBL:BC025245 EMBL:BC058896 EMBL:BC107881 EMBL:BC137136
IPI:IPI00844578 RefSeq:NP_001348.2 UniGene:Hs.191518 PDB:3LLM
PDBsum:3LLM ProteinModelPortal:Q08211 SMR:Q08211 DIP:DIP-31504N
IntAct:Q08211 MINT:MINT-5000572 STRING:Q08211 PhosphoSite:Q08211
DMDM:116241330 SWISS-2DPAGE:Q08211 PaxDb:Q08211 PRIDE:Q08211
Ensembl:ENST00000367549 GeneID:1660 KEGG:hsa:1660 UCSC:uc001gpr.3
GeneCards:GC01P182808 H-InvDB:HIX0001404 H-InvDB:HIX0149309
HGNC:HGNC:2750 HPA:CAB011819 HPA:HPA028050 MIM:603115
neXtProt:NX_Q08211 PharmGKB:PA27232 InParanoid:Q08211
GenomeRNAi:1660 NextBio:6832 PMAP-CutDB:Q08211 ArrayExpress:Q08211
Bgee:Q08211 CleanEx:HS_DHX9 Genevestigator:Q08211
GermOnline:ENSG00000135829 GO:GO:0070934 Uniprot:Q08211
Length = 1270
Score = 306 (112.8 bits), Expect = 1.0e-46, Sum P(2) = 1.0e-46
Identities = 86/238 (36%), Positives = 124/238 (52%)
Query: 187 LHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCM 246
L+ KE P +E+ LK ++V P G VL+F+ G + I + LE + GS
Sbjct: 627 LNEKETPFELIEALLKYIETLNV--P-GAVLVFLPGWNLIYTMQKHLE---MNPHFGSHR 680
Query: 247 DAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQY 306
ILPLH +P E Q +VF P P + I+STNIAETS+T++ VVYVID K + +
Sbjct: 681 YQ-ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLF 739
Query: 307 NPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSL 366
+ M + V SK QR GRAGR RPG C+ L + +T PE+ R+ L
Sbjct: 740 TAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMT-PEMFRTPL 798
Query: 367 AGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
L +K L L I ++PP +++ +A L +DA+D N +T +GR +A
Sbjct: 799 HEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILA 856
Score = 227 (85.0 bits), Expect = 1.0e-46, Sum P(2) = 1.0e-46
Identities = 59/188 (31%), Positives = 93/188 (49%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQIL-----HRHGYTKSGIIGVTQPX 58
LP+ ++E I G TG GK+TQ+ Q + + I+ VTQP
Sbjct: 388 LPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIV-VTQPR 446
Query: 59 XXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSE-RTLIKYLTDGVLLREILSNPDLSP 117
E G G+ GY++RFE I + T GVLLR++ + +
Sbjct: 447 RISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAG--IRG 504
Query: 118 YSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNV 177
S +I+DE HER +NTD LL +++ +V +++I++ SAT+D ++F NCP + V
Sbjct: 505 ISHVIVDEIHERDINTDFLLVVLRDVVQAYP-EVRIVLMSATIDTSMFCEYFFNCPIIEV 563
Query: 178 PGKLYPVE 185
G+ YPV+
Sbjct: 564 YGRTYPVQ 571
>UNIPROTKB|F1PER1 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 GO:GO:0005524 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
EMBL:AAEX03015636 RefSeq:XP_003433686.1 Ensembl:ENSCAFT00000020520
GeneID:100685023 KEGG:cfa:100685023 Uniprot:F1PER1
Length = 745
Score = 489 (177.2 bits), Expect = 2.8e-46, P = 2.8e-46
Identities = 129/410 (31%), Positives = 217/410 (52%)
Query: 27 GETGSGKSTQLSQ-----ILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEV 81
G+ GKS+Q+ Q L H Y G++ TQ E+ V +G EV
Sbjct: 85 GDAKCGKSSQVPQWCAEYCLSIH-YQHGGVV-CTQVHKPTAVQLALRVADEMDVNIGHEV 142
Query: 82 GYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVK 141
GY I FE+ S T+++Y TD +L RE++S+P L Y VIILD+ HERS+ TD+LLGL+K
Sbjct: 143 GYMIPFENCCSSETILRYCTDDMLQREMMSSPFLGNYGVIILDDIHERSIATDVLLGLLK 202
Query: 142 RLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERPTSYLESAL 201
++ L +LK++I S+ K+S ++ N P + V K +PVE+++ LES L
Sbjct: 203 DVL-LARPELKLIINSSPHLISKLSSYYGNVPLIEVK-KQHPVEVVYLSGAQKESLESIL 260
Query: 202 KTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEM 261
+ +IH +GD+++F+ + DIEK + + +L+ + V++PL+ P+
Sbjct: 261 RLIFEIHQSGEKGDIVVFLACEQDIEKAYEIVCQEGSNLNP-DLGELVVVPLY----PKE 315
Query: 262 QVRVFSP---PPPNC----RRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYS 314
+ +F P C RR +++ + E+ + + V +VID G +++ YNP S
Sbjct: 316 KCALFKPNDETEKRCQVYQRRVVLTASSGESLIWSNTVRFVIDVGVERRKVYNPRIRANS 375
Query: 315 LDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLK 374
L IS+ QA R G + GK + LY + + E+Q ++L VL++K
Sbjct: 376 LVTQPISQSQAEIRKQILGSSSSGKLFCLYSEEFASKDMRPLKPAEMQEANLTSMVLFMK 435
Query: 375 SLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
+D++ + DF++ P+ ESL AL+ L + A+D +G+++ G M+
Sbjct: 436 RVDIAGLG--HCDFMNRPAPESLMQALEDLDYLAALDNDGNLSEFGIIMS 483
>UNIPROTKB|G5E5N3 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 UniGene:Bt.5544 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:DAAA02043563 EMBL:DAAA02043564
Ensembl:ENSBTAT00000026409 Uniprot:G5E5N3
Length = 1287
Score = 301 (111.0 bits), Expect = 9.3e-46, Sum P(2) = 9.3e-46
Identities = 85/238 (35%), Positives = 123/238 (51%)
Query: 187 LHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCM 246
L+ KE P +E+ L ++V P G VL+F+ G + I + LE + GS
Sbjct: 624 LNEKETPFELIEALLLYIETLNV--P-GAVLVFLPGWNLIYTMQKHLE---MNPHFGSHR 677
Query: 247 DAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQY 306
ILPLH +P E Q +VF P P + I+STNIAETS+T++ VVYVID K + +
Sbjct: 678 YQ-ILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLF 736
Query: 307 NPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSL 366
+ M + V SK QR GRAGR RPG C+ L + +T PE+ R+ L
Sbjct: 737 TAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMT-PEMFRTPL 795
Query: 367 AGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
L +K L L I ++PP +++ +A L +DA+D N +T +GR +A
Sbjct: 796 HEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILA 853
Score = 223 (83.6 bits), Expect = 9.3e-46, Sum P(2) = 9.3e-46
Identities = 58/188 (30%), Positives = 93/188 (49%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQIL-----HRHGYTKSGIIGVTQPX 58
LP+ ++E I G TG GK+TQ+ Q + + I+ VTQP
Sbjct: 385 LPVKKFESEILEAISQNPVVIIRGATGCGKTTQVPQFILDDCIQNDRAAECNIV-VTQPR 443
Query: 59 XXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSE-RTLIKYLTDGVLLREILSNPDLSP 117
E G G+ GY++RFE I + T GVLLR++ + +
Sbjct: 444 RISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAG--IRG 501
Query: 118 YSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNV 177
S +I+DE HER +NTD LL +++ +V +++I++ SAT+D ++F NCP + V
Sbjct: 502 ISHVIVDEIHERDINTDFLLVVLRDVVQAYP-EVRIVLMSATIDTSMFCEYFFNCPIIEV 560
Query: 178 PGKLYPVE 185
G+ +PV+
Sbjct: 561 YGRTFPVQ 568
>UNIPROTKB|Q28141 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247063 EMBL:X82829 IPI:IPI00714708
PIR:I46032 RefSeq:NP_776461.1 UniGene:Bt.5544
ProteinModelPortal:Q28141 SMR:Q28141 STRING:Q28141 PRIDE:Q28141
GeneID:281115 KEGG:bta:281115 CTD:1660 HOVERGEN:HBG039429
InParanoid:Q28141 KO:K13184 OrthoDB:EOG4HHP1J NextBio:20805185
GO:GO:0070937 Uniprot:Q28141
Length = 1287
Score = 301 (111.0 bits), Expect = 9.3e-46, Sum P(2) = 9.3e-46
Identities = 85/238 (35%), Positives = 123/238 (51%)
Query: 187 LHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCM 246
L+ KE P +E+ L ++V P G VL+F+ G + I + LE + GS
Sbjct: 624 LNEKETPFELIEALLLYIETLNV--P-GAVLVFLPGWNLIYTMQKHLE---MNPHFGSHR 677
Query: 247 DAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQY 306
ILPLH +P E Q +VF P P + I+STNIAETS+T++ VVYVID K + +
Sbjct: 678 YQ-ILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLF 736
Query: 307 NPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSL 366
+ M + V SK QR GRAGR RPG C+ L + +T PE+ R+ L
Sbjct: 737 TAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMT-PEMFRTPL 795
Query: 367 AGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
L +K L L I ++PP +++ +A L +DA+D N +T +GR +A
Sbjct: 796 HEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILA 853
Score = 223 (83.6 bits), Expect = 9.3e-46, Sum P(2) = 9.3e-46
Identities = 58/188 (30%), Positives = 93/188 (49%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQIL-----HRHGYTKSGIIGVTQPX 58
LP+ ++E I G TG GK+TQ+ Q + + I+ VTQP
Sbjct: 385 LPVKKFESEILEAISQNPVVIIRGATGCGKTTQVPQFILDDCIQNDRAAECNIV-VTQPR 443
Query: 59 XXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSE-RTLIKYLTDGVLLREILSNPDLSP 117
E G G+ GY++RFE I + T GVLLR++ + +
Sbjct: 444 RISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAG--IRG 501
Query: 118 YSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNV 177
S +I+DE HER +NTD LL +++ +V +++I++ SAT+D ++F NCP + V
Sbjct: 502 ISHVIVDEIHERDINTDFLLVVLRDVVQAYP-EVRIVLMSATIDTSMFCEYFFNCPIIEV 560
Query: 178 PGKLYPVE 185
G+ +PV+
Sbjct: 561 YGRTFPVQ 568
>UNIPROTKB|A7MBI4 [details] [associations]
symbol:DHX32 "DHX32 protein" species:9913 "Bos taurus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 GO:GO:0005524 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
EMBL:DAAA02059534 EMBL:DAAA02059535 EMBL:DAAA02059536 EMBL:BC151578
IPI:IPI00715161 RefSeq:NP_001094614.1 UniGene:Bt.44006
Ensembl:ENSBTAT00000007619 GeneID:532978 KEGG:bta:532978
InParanoid:A7MBI4 NextBio:20875863 Uniprot:A7MBI4
Length = 744
Score = 480 (174.0 bits), Expect = 2.8e-45, P = 2.8e-45
Identities = 125/409 (30%), Positives = 213/409 (52%)
Query: 27 GETGSGKSTQLSQILHRH----GYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVG 82
G+ GKS+Q+ Q + Y G++ TQ E+ V +G EVG
Sbjct: 85 GDAKCGKSSQVPQWCAEYCLSIDYRHGGVV-CTQVHKPTAVQLALRVADEMDVNIGHEVG 143
Query: 83 YAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKR 142
Y I FE+ + T+++Y TD +L RE++SNP L Y VIILD+ HERS+ TD+LLGL+K
Sbjct: 144 YVIPFENCCTSETILRYCTDDMLQREMMSNPFLGSYGVIILDDIHERSMATDVLLGLLKD 203
Query: 143 LVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERPTSYLESALK 202
++ L +LK++I S+ K+S ++ N P + V K +PVE ++ ES L+
Sbjct: 204 VL-LARPELKLIINSSPHLINKLSSYYGNVPLIQVKNK-HPVEAVYLSGAQKESFESILR 261
Query: 203 TAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQ 262
+IH +GD+++F+ + DIEK + + +L+ + V++PL+ P+ +
Sbjct: 262 LIFEIHHSGEKGDIVVFLACEQDIEKAYEIVCQEGSNLNP-DLGELVVVPLY----PKEK 316
Query: 263 VRVFSP---PPPNC----RRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSL 315
+F P C RR +++ + E+ + + V +VID G +++ YNP SL
Sbjct: 317 CALFKPNDETEKRCPVYQRRVVLTASSGESLICSNTVKFVIDVGVERRKVYNPRIRADSL 376
Query: 316 DVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKS 375
IS+ QA R + GK + LY + + E+Q ++L VL++K
Sbjct: 377 VTQPISQSQAETRKQILSASPSGKLFCLYSEEFASRDMQPLKPAEMQEANLTSMVLFMKR 436
Query: 376 LDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
+D++ + DF++ P+ ESL AL+ L + A+D +G+++ G M+
Sbjct: 437 VDIAGLG--HCDFMNRPAPESLMQALEDLDYLAALDNDGNLSEFGIIMS 483
>ZFIN|ZDB-GENE-070912-171 [details] [associations]
symbol:dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide
9" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 ZFIN:ZDB-GENE-070912-171
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 HOVERGEN:HBG039429 OrthoDB:EOG4HHP1J
OMA:DDWIRLQ EMBL:BX571812 IPI:IPI00491874 UniGene:Dr.79297
SMR:B0S6Z1 Ensembl:ENSDART00000111661 Ensembl:ENSDART00000134918
Uniprot:B0S6Z1
Length = 1271
Score = 297 (109.6 bits), Expect = 3.3e-45, Sum P(2) = 3.3e-45
Identities = 84/238 (35%), Positives = 120/238 (50%)
Query: 187 LHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCM 246
L+ KE +E+ LK I E G VL+F+ G + I + LE + G
Sbjct: 633 LNEKETSFELIEALLKY---IETLEVPGAVLVFLPGWNLIYFMQKHLE---MNPHFGGHQ 686
Query: 247 DAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQY 306
ILPLH +P E Q RVF P P + I+STNIAETS+T++ VV+V+D K + +
Sbjct: 687 YR-ILPLHSQIPREEQRRVFEPVPDGVTKVILSTNIAETSITINDVVFVLDSCKQKVKLF 745
Query: 307 NPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSL 366
+ M + V SK QR GRAGR RPG C+ L + +T PEI R+ L
Sbjct: 746 TSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFEKLETHMT-PEIFRTPL 804
Query: 367 AGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
L +K L L I ++PP +++ +A L +DA+D N +T +GR +A
Sbjct: 805 HEVALSIKLLRLGGIGNFLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGRILA 862
Score = 233 (87.1 bits), Expect = 3.3e-45, Sum P(2) = 3.3e-45
Identities = 61/189 (32%), Positives = 95/189 (50%)
Query: 2 ANLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQ-ILH---RHGYTKSGIIGVTQP 57
+ LP+ ++E I G TG GK+TQ+ Q IL + G I VTQP
Sbjct: 393 SQLPVKNFQEQIMSTIYNNPVVIIRGATGCGKTTQVPQYILDEFIKGGRASDCNIVVTQP 452
Query: 58 XXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSE-RTLIKYLTDGVLLREILSNPDLS 116
E G +G+ GY++RFE I + T GVLLR++ S +
Sbjct: 453 RRISAVSVAERVSFERGEDVGKSCGYSVRFESFLPRPHASILFCTVGVLLRKLESG--IR 510
Query: 117 PYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLN 176
S +I+DE HER +NTD LL +++ +V +++++ SAT+D ++F NCP +
Sbjct: 511 GISHVIVDEIHERDINTDFLLVVLRDVVQAYPD-VRVILMSATIDTTMFKEYFFNCPVIE 569
Query: 177 VPGKLYPVE 185
V G+ +PV+
Sbjct: 570 VHGRAHPVQ 578
>UNIPROTKB|G4MR96 [details] [associations]
symbol:MGG_04709 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001231 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003710833.1
EnsemblFungi:MGG_04709T0 GeneID:2677908 KEGG:mgr:MGG_04709
Uniprot:G4MR96
Length = 1504
Score = 287 (106.1 bits), Expect = 5.3e-45, Sum P(2) = 5.3e-45
Identities = 76/246 (30%), Positives = 127/246 (51%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQIL--HRHGYTKSGIIGVTQPXXXX 61
LP+ + E + GETG GKSTQ+ L H+ K+ I T+P
Sbjct: 691 LPMWAFREQVLSAVDQHQVVIVCGETGCGKSTQVPSFLLEHQLAQGKACKIYCTEPRRIS 750
Query: 62 XXXXXXXXXQELGVR---LGEE---VGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDL 115
+ELG LG VGY+IR E TS T + + T G+++R + + DL
Sbjct: 751 AISLARRVSEELGEGRNDLGTSRSLVGYSIRLEANTSRETRLVFATTGIVMRMLEGSNDL 810
Query: 116 SPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTL 175
+ ++LDE HERS+++D LL ++K+L+ R LK+++ SAT+D ++ S + P L
Sbjct: 811 RDITHLVLDEVHERSIDSDFLLIVLKKLMT-RRKDLKVVLMSATVDADRFSNYLDGAPVL 869
Query: 176 NVPGKLYPVEILHSKERPTSYLESALK-TAIDIHVREPEGDVLIFMTGQDDIEKLVSKLE 234
NVPG+ +PV++ ++LE A++ T I + P+ + L+ + ++E S
Sbjct: 870 NVPGRTFPVQV--------NFLEDAVELTGYTIDQKVPQ-ERLVEIDEDAEVEPESSSKT 920
Query: 235 DKIRSL 240
+ ++SL
Sbjct: 921 ELLKSL 926
Score = 255 (94.8 bits), Expect = 5.3e-45, Sum P(2) = 5.3e-45
Identities = 68/225 (30%), Positives = 114/225 (50%)
Query: 202 KTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEM 261
+ A D + ++ +L+F+ G +I L L RS + + ++ PLH ++ E
Sbjct: 956 RIASDPNYQDYSKAILVFLPGIAEIRTLNDLLLGD-RSFQQ----NWLVYPLHSTIATEE 1010
Query: 262 QVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQIS 321
Q F PP R+ +++TNIAET +T+ V VID G ++ +++ M L IS
Sbjct: 1011 QEAAFLVPPHGMRKIVLATNIAETGITIPDVTCVIDTGKHREMRFDERRQMSRLIDTFIS 1070
Query: 322 KVQANQRVGRAGRTRPGKCYRLYPSTVY-HDEFL-DVTVPEIQRSSLAGSVLYLKSLDLS 379
+ A QR GRAGR + G C+ ++ T Y HD + D PE+ R SL + +K +
Sbjct: 1071 RANAKQRRGRAGRVQQGLCFHMF--TKYRHDAIMADQQTPEMLRLSLQDLAIRVKICKIG 1128
Query: 380 DINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
I LDPPS++++ A+ L + A+ + +T +G +A
Sbjct: 1129 GIEETLSKALDPPSAKNIRRAIDALIDVRALTQGEDLTPLGNQLA 1173
>UNIPROTKB|Q8EJ41 [details] [associations]
symbol:hrpB "ATP-dependent helicase HrpB" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 RefSeq:NP_716265.1 HSSP:P26664
ProteinModelPortal:Q8EJ41 GeneID:1168495 KEGG:son:SO_0632
PATRIC:23520950 ProtClustDB:CLSK905853 Uniprot:Q8EJ41
Length = 835
Score = 477 (173.0 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 135/430 (31%), Positives = 214/430 (49%)
Query: 1 MANLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXX 60
M NLPI ++ TG+GKST L + SG I + +P
Sbjct: 1 MNNLPIHSLLPSLRDAFATHAQVILEAPTGAGKSTALPLAMLDWAEI-SGRILMLEPRRV 59
Query: 61 XXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSV 120
+G+EVG+ +R E + S T ++ +T+G+L R I +P+L+ +
Sbjct: 60 AARSVAQFIASCRQQAVGQEVGFRVRGEAKVSRDTRLEIVTEGILTRMIQQDPELTGIDM 119
Query: 121 IILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGK 180
II DE HER L TD+ L L + + LKIL SATL G +S+ L G+
Sbjct: 120 IIFDEIHERHLTTDLGLALALEVQSSLRDDLKILAMSATLSGLALSELMPYAALLKSEGR 179
Query: 181 LYPVEILH-SKERPTSYLESALKTAID----IHVREPEGDVLIFMTGQDDIEKLVSKLED 235
+PVEI++ + +L+ +T +D I P+ D+L+F+ G+ +I ++ L +
Sbjct: 180 TFPVEIIYRAVAGQQHWLDHLSRTVLDSAASITDSGPQ-DILVFLPGKAEILRVAQYLAE 238
Query: 236 KIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYV 295
++ +GS + I PL+G L + Q R R+ ++STN+AE+SLT++G+ V
Sbjct: 239 RL----DGSRV--AICPLYGELSAQEQDRAIKADASGRRKIVLSTNVAESSLTIEGIGLV 292
Query: 296 IDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLD 355
ID GY +Q +NP +G+ L + +IS+ A QR GRAGR G C RL+ H L
Sbjct: 293 IDSGYKRQASFNPKTGVTRLSLKRISQASATQRAGRAGRLAAGVCIRLWGQEE-HQRLLK 351
Query: 356 VTVPEIQRS---SLAGSVLYLKSLDLSDINVLKFDFLDPPS-SESLEDALKQLYLIDAID 411
PEI ++ S+A Y + SD+ +L PPS +E+L A + L +D +D
Sbjct: 352 ADEPEISQADLVSMAHDCAYWGAKSFSDLLLLTA----PPSVNEAL--AWQLLRRLDVVD 405
Query: 412 ENGSITSIGR 421
+T+ G+
Sbjct: 406 GQNKLTAHGK 415
>TIGR_CMR|SO_0632 [details] [associations]
symbol:SO_0632 "ATP-dependent helicase HrpB" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 RefSeq:NP_716265.1 HSSP:P26664
ProteinModelPortal:Q8EJ41 GeneID:1168495 KEGG:son:SO_0632
PATRIC:23520950 ProtClustDB:CLSK905853 Uniprot:Q8EJ41
Length = 835
Score = 477 (173.0 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 135/430 (31%), Positives = 214/430 (49%)
Query: 1 MANLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPXXX 60
M NLPI ++ TG+GKST L + SG I + +P
Sbjct: 1 MNNLPIHSLLPSLRDAFATHAQVILEAPTGAGKSTALPLAMLDWAEI-SGRILMLEPRRV 59
Query: 61 XXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSV 120
+G+EVG+ +R E + S T ++ +T+G+L R I +P+L+ +
Sbjct: 60 AARSVAQFIASCRQQAVGQEVGFRVRGEAKVSRDTRLEIVTEGILTRMIQQDPELTGIDM 119
Query: 121 IILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGK 180
II DE HER L TD+ L L + + LKIL SATL G +S+ L G+
Sbjct: 120 IIFDEIHERHLTTDLGLALALEVQSSLRDDLKILAMSATLSGLALSELMPYAALLKSEGR 179
Query: 181 LYPVEILH-SKERPTSYLESALKTAID----IHVREPEGDVLIFMTGQDDIEKLVSKLED 235
+PVEI++ + +L+ +T +D I P+ D+L+F+ G+ +I ++ L +
Sbjct: 180 TFPVEIIYRAVAGQQHWLDHLSRTVLDSAASITDSGPQ-DILVFLPGKAEILRVAQYLAE 238
Query: 236 KIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYV 295
++ +GS + I PL+G L + Q R R+ ++STN+AE+SLT++G+ V
Sbjct: 239 RL----DGSRV--AICPLYGELSAQEQDRAIKADASGRRKIVLSTNVAESSLTIEGIGLV 292
Query: 296 IDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLD 355
ID GY +Q +NP +G+ L + +IS+ A QR GRAGR G C RL+ H L
Sbjct: 293 IDSGYKRQASFNPKTGVTRLSLKRISQASATQRAGRAGRLAAGVCIRLWGQEE-HQRLLK 351
Query: 356 VTVPEIQRS---SLAGSVLYLKSLDLSDINVLKFDFLDPPS-SESLEDALKQLYLIDAID 411
PEI ++ S+A Y + SD+ +L PPS +E+L A + L +D +D
Sbjct: 352 ADEPEISQADLVSMAHDCAYWGAKSFSDLLLLTA----PPSVNEAL--AWQLLRRLDVVD 405
Query: 412 ENGSITSIGR 421
+T+ G+
Sbjct: 406 GQNKLTAHGK 415
>UNIPROTKB|F1SDM5 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
OMA:LACEQDI EMBL:CT841550 Ensembl:ENSSSCT00000011756 Uniprot:F1SDM5
Length = 742
Score = 472 (171.2 bits), Expect = 2.2e-44, P = 2.2e-44
Identities = 126/411 (30%), Positives = 216/411 (52%)
Query: 27 GETGSGKSTQLSQ-----ILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEV 81
G+ GKS+Q+ Q L H Y G++ TQ E+ V +G EV
Sbjct: 85 GDATCGKSSQVPQWCAEYCLSIH-YQHGGVV-CTQVHKQTAVQLALRVADEMDVNIGHEV 142
Query: 82 GYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVK 141
GY I FE+ + T+++Y TD +L RE++SNP L Y VIILD+ ERS+ TD+LLGL+K
Sbjct: 143 GYVIPFENCCTSETILRYCTDDMLQREMMSNPFLGSYGVIILDDVQERSIATDVLLGLLK 202
Query: 142 RLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERPTSYLESAL 201
++ L +LK++I S+ +S ++ N P + V K PVE+++ LE+ L
Sbjct: 203 DVL-LARPELKLIINSSPHLISTLSSYYGNVPLIEVTSKR-PVEVVYLSGAQKEALEAVL 260
Query: 202 KTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEM 261
+ +IH EGD+++F+ + DIEK + + +L+ + V++PL+ P+
Sbjct: 261 RLIFEIHHSGEEGDIVVFLACEQDIEKAYEIVCQEGTNLNP-DLGELVVVPLY----PKE 315
Query: 262 QVRVFSP---PPPNC----RRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQ-YNPSSGMY 313
+ +F P C RR +++ + E+ + + V +VID G ++++ Y+P
Sbjct: 316 KCALFKPNDEAEKRCQVYQRRVVLTASSGESLIWSNTVRFVIDVGVERRKKVYSPRIRAD 375
Query: 314 SLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYL 373
SL + IS+ QA R G + GK + LY + + E+Q ++L VL++
Sbjct: 376 SLVLQPISQSQAEMRKQVLGSSSSGKLFCLYSEEFASKDMRPLKPAEMQHANLTSMVLFM 435
Query: 374 KSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
K +D++ + DF++ P+ ESL AL+ L + A+D +G+++ G M+
Sbjct: 436 KRVDIAGLG--HCDFMNRPAPESLMQALEDLDYLAALDNDGNLSEFGIIMS 484
>ZFIN|ZDB-GENE-090313-193 [details] [associations]
symbol:tdrd9 "tudor domain containing 9"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0043046 "DNA methylation
involved in gamete generation" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0009566
"fertilization" evidence=ISS] [GO:0007283 "spermatogenesis"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0034587 "piRNA metabolic process" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 ZFIN:ZDB-GENE-090313-193
GO:GO:0005524 GO:GO:0003676 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 GO:GO:0008026 EMBL:BX072537
IPI:IPI00488074 Ensembl:ENSDART00000124958 Bgee:F1RA66
Uniprot:F1RA66
Length = 1344
Score = 286 (105.7 bits), Expect = 2.6e-44, Sum P(2) = 2.6e-44
Identities = 79/222 (35%), Positives = 114/222 (51%)
Query: 212 PE-GDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPP 270
PE G VL+F+ G +I+ + L +R + + PLH ++ E Q VF P
Sbjct: 344 PERGSVLVFLPGLAEIQYMKEALSKLVRKRLQ-------VYPLHSTVTLEEQNGVFLVPV 396
Query: 271 PNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVG 330
P R+ I+STNIAE+S+TV V YVID V+Q + + L + SK NQR G
Sbjct: 397 PGYRKIILSTNIAESSVTVPDVKYVIDFCLVRQLACDKETNYRCLRITWASKTSCNQRRG 456
Query: 331 RAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLD 390
RAGR G CYRL + +E + ++PE+ RS LA ++L +K LD+ D + L
Sbjct: 457 RAGRVSKGFCYRLVTRHFWENEIPNFSIPEMLRSPLASTLLKVKLLDMGDPRSVLSTALT 516
Query: 391 PPSSESLEDALKQLYLIDA--IDEN------GSITSIGRTMA 424
PP +E + QL I A + N G +T +GR +A
Sbjct: 517 PPILGDIERTVLQLKQIGALSVQSNSQRQFDGDLTFLGRVLA 558
Score = 249 (92.7 bits), Expect = 2.6e-44, Sum P(2) = 2.6e-44
Identities = 65/209 (31%), Positives = 104/209 (49%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI---IGVTQPXXX 60
LPI + + + G TGSGK+TQL Q + H Y + I + VTQP
Sbjct: 89 LPITKNRQELVSLIENNSVVIIRGATGSGKTTQLPQFILDH-YAERNIPCNLVVTQPRKI 147
Query: 61 XXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSV 120
+E LG VGY + E +E T + Y+T GVLL++++S+ L+ YS
Sbjct: 148 GATSIARWVARERKCTLGSLVGYQVGLEKMATEHTKLIYVTTGVLLQKLVSSKTLTEYSH 207
Query: 121 IILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGK 180
I +DE HERS D LL +V++L+ + +K+++ SAT++ + +++F + P N
Sbjct: 208 IFIDEVHERSEELDFLLLVVRKLLRSNSRYVKVILMSATINCIEFAEYFGS-PIRNQMNP 266
Query: 181 LYPVEILHSKERPTSYLESALKTAIDIHV 209
Y E+ + Y LKT + + V
Sbjct: 267 AYVFEVEGAPYAVEEYYLDELKTMLPVGV 295
>UNIPROTKB|Q9KUC1 [details] [associations]
symbol:VC_0601 "ATP-dependent helicase HrpB" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI ProtClustDB:PRK11664 InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 PIR:H82302 RefSeq:NP_230251.1
ProteinModelPortal:Q9KUC1 DNASU:2615389 GeneID:2615389
KEGG:vch:VC0601 PATRIC:20080310 Uniprot:Q9KUC1
Length = 820
Score = 470 (170.5 bits), Expect = 6.3e-44, P = 6.3e-44
Identities = 123/422 (29%), Positives = 205/422 (48%)
Query: 1 MANLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLS-QILHRHGYTKSGIIGVTQPXX 59
M+ LPI++ + G+GKST Q+L G+ G I + +P
Sbjct: 1 MSPLPIIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAGGF--HGKIIMLEPRR 58
Query: 60 XXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYS 119
Q+LG +G+ VGY +R E+R S T ++ +T+G++ R + ++P+L
Sbjct: 59 LAARNIARYLAQQLGEEVGQRVGYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVD 118
Query: 120 VIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPG 179
V+I DE HERS++ D L L + + LKI++ SATLD + + + G
Sbjct: 119 VLIFDEFHERSIHADTALALALEVQSALREDLKIVVMSATLDQQALQNLLPQASYVESQG 178
Query: 180 KLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRS 239
+ +P+EI + R L +A++ I ++ G +L F+ G I +L +L D
Sbjct: 179 RGFPIEIRYQPLRSDEPLVTAMQRQIRHLLQHETGSLLAFLPGAASINQLTEQLSDLASE 238
Query: 240 LDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCG 299
++ I PL+G + Q R +P R+ +++TNIAETSLT++G+ V+D G
Sbjct: 239 VE--------ICPLYGQMEFAAQQRAIAPTAAGRRKVVLATNIAETSLTIEGIRIVLDSG 290
Query: 300 YVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVP 359
+ +++ +G+ L+ V+I++ A QR GRAGR PG C RLY + V P
Sbjct: 291 LERSARFDLKTGITRLEQVRIAQSSAEQRAGRAGRLEPGICVRLYSEAQLKQQPW-VPEP 349
Query: 360 EIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSI 419
E+ + LA L L ++ + PPSS + A + L + +D IT+
Sbjct: 350 EMLHTDLAPLALELAQWGAQPSDLAWLNL--PPSS-AFAQAQQLLQRLGLLDARTQITAA 406
Query: 420 GR 421
G+
Sbjct: 407 GK 408
>TIGR_CMR|VC_0601 [details] [associations]
symbol:VC_0601 "ATP-dependent helicase HrpB" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI ProtClustDB:PRK11664 InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 PIR:H82302 RefSeq:NP_230251.1
ProteinModelPortal:Q9KUC1 DNASU:2615389 GeneID:2615389
KEGG:vch:VC0601 PATRIC:20080310 Uniprot:Q9KUC1
Length = 820
Score = 470 (170.5 bits), Expect = 6.3e-44, P = 6.3e-44
Identities = 123/422 (29%), Positives = 205/422 (48%)
Query: 1 MANLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLS-QILHRHGYTKSGIIGVTQPXX 59
M+ LPI++ + G+GKST Q+L G+ G I + +P
Sbjct: 1 MSPLPIIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAGGF--HGKIIMLEPRR 58
Query: 60 XXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYS 119
Q+LG +G+ VGY +R E+R S T ++ +T+G++ R + ++P+L
Sbjct: 59 LAARNIARYLAQQLGEEVGQRVGYRVRGENRVSRATQLEIVTEGIMTRMLQNDPELDGVD 118
Query: 120 VIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPG 179
V+I DE HERS++ D L L + + LKI++ SATLD + + + G
Sbjct: 119 VLIFDEFHERSIHADTALALALEVQSALREDLKIVVMSATLDQQALQNLLPQASYVESQG 178
Query: 180 KLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRS 239
+ +P+EI + R L +A++ I ++ G +L F+ G I +L +L D
Sbjct: 179 RGFPIEIRYQPLRSDEPLVTAMQRQIRHLLQHETGSLLAFLPGAASINQLTEQLSDLASE 238
Query: 240 LDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCG 299
++ I PL+G + Q R +P R+ +++TNIAETSLT++G+ V+D G
Sbjct: 239 VE--------ICPLYGQMEFAAQQRAIAPTAAGRRKVVLATNIAETSLTIEGIRIVLDSG 290
Query: 300 YVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVP 359
+ +++ +G+ L+ V+I++ A QR GRAGR PG C RLY + V P
Sbjct: 291 LERSARFDLKTGITRLEQVRIAQSSAEQRAGRAGRLEPGICVRLYSEAQLKQQPW-VPEP 349
Query: 360 EIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSI 419
E+ + LA L L ++ + PPSS + A + L + +D IT+
Sbjct: 350 EMLHTDLAPLALELAQWGAQPSDLAWLNL--PPSS-AFAQAQQLLQRLGLLDARTQITAA 406
Query: 420 GR 421
G+
Sbjct: 407 GK 408
>UNIPROTKB|P37024 [details] [associations]
symbol:hrpB "predicted ATP-dependent helicase"
species:83333 "Escherichia coli K-12" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 GO:GO:0008026
EMBL:D42122 PIR:D64738 RefSeq:NP_414690.4 RefSeq:YP_488451.1
ProteinModelPortal:P37024 SMR:P37024 DIP:DIP-9938N IntAct:P37024
MINT:MINT-1231977 PRIDE:P37024 EnsemblBacteria:EBESCT00000000663
EnsemblBacteria:EBESCT00000016535 GeneID:12932407 GeneID:944845
KEGG:ecj:Y75_p0145 KEGG:eco:b0148 PATRIC:32115403 EchoBASE:EB2233
EcoGene:EG12329 HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI
ProtClustDB:PRK11664 BioCyc:EcoCyc:EG12329-MONOMER
BioCyc:ECOL316407:JW0144-MONOMER Genevestigator:P37024
InterPro:IPR010225 InterPro:IPR013689 Pfam:PF08482
PIRSF:PIRSF005496 TIGRFAMs:TIGR01970 Uniprot:P37024
Length = 809
Score = 469 (170.2 bits), Expect = 7.7e-44, P = 7.7e-44
Identities = 126/425 (29%), Positives = 213/425 (50%)
Query: 1 MANLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLS-QILHRHGYTKSGIIGVTQPXX 59
M++LP+ + TG+GKST L Q+L G +G I + +P
Sbjct: 1 MSSLPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLPLQLLAHPGI--NGKIILLEPRR 58
Query: 60 XXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYS 119
+ L + G+ VGY +R ++ T ++ +T+GVL R I +P+LS
Sbjct: 59 LAARNVAQRLAELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEGVLTRMIQRDPELSGVG 118
Query: 120 VIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPG 179
++ILDE HERSL D+ L L+ + LK+LI SATLD +++ + P + G
Sbjct: 119 LVILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDNDRLQQMLPEAPVVISEG 178
Query: 180 KLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRS 239
+ +PVE + + A+ A +R+ G +L+F+ G +I+++ +L +I
Sbjct: 179 RSFPVERRYLPLPAHQRFDDAVAVATAEMLRQESGSLLLFLPGVGEIQRVQEQLASRI-- 236
Query: 240 LDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCG 299
GS D ++ PL+G+L Q + P P R+ +++TNIAETSLT++G+ V+DC
Sbjct: 237 ---GS--DVLLCPLYGALSLNDQRKAILPAPQGMRKVVLATNIAETSLTIEGIRLVVDCA 291
Query: 300 YVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVP 359
+ +++P +G+ L ++S+ QR GRAGR PG L + + P
Sbjct: 292 QERVARFDPRTGLTRLITQRVSQASMTQRAGRAGRLEPGISLHLIAKE-QAERAAAQSEP 350
Query: 360 EIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSI 419
EI +S L+G ++ L SD + +LD P +L A + L ++ A+ E +++
Sbjct: 351 EILQSDLSGLLMELLQWGCSD--PAQMSWLDQPPVVNLLAAKRLLQMLGAL-EGERLSAQ 407
Query: 420 GRTMA 424
G+ MA
Sbjct: 408 GQKMA 412
>FB|FBgn0002774 [details] [associations]
symbol:mle "maleless" species:7227 "Drosophila melanogaster"
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;TAS] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0007549 "dosage compensation"
evidence=NAS;IMP;TAS] [GO:0009047 "dosage compensation by
hyperactivation of X chromosome" evidence=NAS] [GO:0045433 "male
courtship behavior, veined wing generated song production"
evidence=IGI] [GO:0016456 "X chromosome located dosage compensation
complex, transcription activating" evidence=NAS;TAS] [GO:0005694
"chromosome" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0016457 "dosage
compensation complex assembly involved in dosage compensation by
hyperactivation of X chromosome" evidence=TAS] [GO:0003724 "RNA
helicase activity" evidence=NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0048675 "axon extension" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0000805 "X chromosome" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 EMBL:AE013599 GO:GO:0005524 GO:GO:0008340
Gene3D:3.30.160.20 GO:GO:0045944 GO:GO:0000785 GO:GO:0003682
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045433 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0048675 GO:GO:0003724
GeneTree:ENSGT00550000074257 KO:K13184 OMA:DDWIRLQ GO:GO:0016456
EMBL:M74121 EMBL:BT003785 EMBL:BT010267 PIR:B40025
RefSeq:NP_476641.1 RefSeq:NP_724440.1 UniGene:Dm.2901
ProteinModelPortal:P24785 SMR:P24785 IntAct:P24785 MINT:MINT-768581
STRING:P24785 PaxDb:P24785 PRIDE:P24785 EnsemblMetazoa:FBtr0086031
GeneID:35523 KEGG:dme:Dmel_CG11680 CTD:35523 FlyBase:FBgn0002774
InParanoid:P24785 OrthoDB:EOG47H44V PhylomeDB:P24785
GenomeRNAi:35523 NextBio:793836 Bgee:P24785 GermOnline:CG11680
GO:GO:0016457 Uniprot:P24785
Length = 1293
Score = 282 (104.3 bits), Expect = 7.8e-44, Sum P(2) = 7.8e-44
Identities = 74/226 (32%), Positives = 116/226 (51%)
Query: 201 LKTAIDIHVREPE--GDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLP 258
L A+ +H++ G +L+F+ G + I L+ L++ ++ G ILP H +P
Sbjct: 639 LLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNT--NIF-GDTSQYQILPCHSQIP 695
Query: 259 PEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVV 318
+ Q +VF P P + I+STNIAETS+T+D +V+VID + + + + + S V
Sbjct: 696 RDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATV 755
Query: 319 QISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDL 378
SK QR GRAGR RPG C+ L S D PE+ R+ L L +K L L
Sbjct: 756 WASKTNLEQRKGRAGRVRPGFCFTLC-SRARFQALEDNLTPEMFRTPLHEMALTIKLLRL 814
Query: 379 SDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
I+ L+PP +++ +A L + +D N +T +GR +A
Sbjct: 815 GSIHHFLSKALEPPPVDAVIEAEVLLREMRCLDANDELTPLGRLLA 860
Score = 250 (93.1 bits), Expect = 7.8e-44, Sum P(2) = 7.8e-44
Identities = 79/242 (32%), Positives = 118/242 (48%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGIIG-----VTQPX 58
LPI I G TG GK+TQ++Q + Y SG G VTQP
Sbjct: 384 LPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYI-LDDYICSGQGGYANIYVTQPR 442
Query: 59 XXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERT-LIKYLTDGVLLREILSNPDLSP 117
+E +LG+ VGY++RFE I + T GVLLR++ + L
Sbjct: 443 RISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTVGVLLRKLEAG--LRG 500
Query: 118 YSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNV 177
S II+DE HER +N+D LL +++ +V+ L +++ SAT+D K SK+F CP L V
Sbjct: 501 VSHIIVDEIHERDVNSDFLLVILRDMVDTYPD-LHVILMSATIDTTKFSKYFGICPVLEV 559
Query: 178 PGKLYPVE--ILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKL-E 234
PG+ +PV+ L + T ++ SA +E E + + +D+ E +K+ E
Sbjct: 560 PGRAFPVQQFFLEDIIQMTDFVPSAESRR---KRKEVEDEEQLLSEDKDEAEINYNKVCE 616
Query: 235 DK 236
DK
Sbjct: 617 DK 618
>WB|WBGene00004355 [details] [associations]
symbol:rha-1 species:6239 "Caenorhabditis elegans"
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] [GO:0045814 "negative regulation of gene expression,
epigenetic" evidence=IMP] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0051301 GO:GO:0007067 GO:GO:0006355
GO:GO:0003677 Gene3D:3.30.160.20 GO:GO:0006351 GO:GO:0007281
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257 KO:K13184
EMBL:Z50071 PIR:T24664 RefSeq:NP_495890.2 ProteinModelPortal:Q22307
SMR:Q22307 STRING:Q22307 PaxDb:Q22307 EnsemblMetazoa:T07D4.3.1
EnsemblMetazoa:T07D4.3.2 GeneID:174417 KEGG:cel:CELE_T07D4.3
UCSC:T07D4.3 CTD:174417 WormBase:T07D4.3 InParanoid:Q22307
OMA:DDWIRLQ NextBio:883938 GO:GO:0045814 Uniprot:Q22307
Length = 1301
Score = 290 (107.1 bits), Expect = 2.6e-43, Sum P(2) = 2.6e-43
Identities = 85/252 (33%), Positives = 125/252 (49%)
Query: 173 PTLNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSK 232
P++N K + + K+ P +E+ L DI R +G VL+F+ G +I L ++
Sbjct: 623 PSINESLKT-AMSRISEKDIPFGVIEAILN---DIASRGVDGAVLVFLPGWAEIMTLCNR 678
Query: 233 LEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGV 292
L + + G ILPLH L + Q +VF+ P R+ IVSTNIAETS+T+D V
Sbjct: 679 L---LEHQEFGQANKYEILPLHSQLTSQEQRKVFNHYPGK-RKIIVSTNIAETSITIDDV 734
Query: 293 VYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDE 352
VYVID K+R Y ++ M V SK QR GRAGR R G + L S + +
Sbjct: 735 VYVIDSCKAKERMYTSNNNMVHFATVWASKTNVIQRRGRAGRVRAGYAFHLC-SKMRFEA 793
Query: 353 FLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDE 412
D E+ R L L +K L L + L PP + + ++ L + A+D
Sbjct: 794 LDDHGTAEMLRIPLHQIALTIKLLRLGSVGEFLGKALQPPPYDMVVESEAVLQAMGALDR 853
Query: 413 NGSITSIGRTMA 424
N +TS+G+ +A
Sbjct: 854 NLELTSLGKMLA 865
Score = 232 (86.7 bits), Expect = 2.6e-43, Sum P(2) = 2.6e-43
Identities = 67/207 (32%), Positives = 104/207 (50%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQIL------HRHGYTKSGIIGVTQP 57
LP+ QY E I GETG GKSTQ++Q L + +G + + + V+QP
Sbjct: 381 LPVAQYRENIVQTVAENRVTLIKGETGCGKSTQVAQFLLESFLENSNGASFNAV--VSQP 438
Query: 58 XXXXXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERT-LIKYLTDGVLLREILSNPDLS 116
E G +GE GY +RF+ T I + T GVLLR ++ N L
Sbjct: 439 RRISAISLAERVANERGEEVGETCGYNVRFDSATPRPYGSIMFCTVGVLLR-MMEN-GLR 496
Query: 117 PYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLN 176
S +I+DE HER ++TD +L +++ +++ L++++ SAT+D + + FFS+ P +
Sbjct: 497 GISHVIIDEIHERDVDTDFVLIVLREMISTYRD-LRVVLMSATIDTDLFTNFFSSIPDVG 555
Query: 177 VPGKLYPVEILHSKERPTS--YLESAL 201
P PV +H + P YLE L
Sbjct: 556 -PT---PVITMHGRTFPVQSFYLEDIL 578
>RGD|1591766 [details] [associations]
symbol:Dqx1 "DEAQ box RNA-dependent ATPase 1" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
RGD:1591766 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH473957
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
CTD:165545 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3 IPI:IPI00194915
RefSeq:NP_001102877.1 UniGene:Rn.154059 Ensembl:ENSRNOT00000011002
GeneID:680434 KEGG:rno:680434 UCSC:RGD:1591766 NextBio:718702
Uniprot:D4A474
Length = 717
Score = 460 (167.0 bits), Expect = 3.7e-43, P = 3.7e-43
Identities = 127/413 (30%), Positives = 212/413 (51%)
Query: 27 GETGSGKSTQLSQILHRHGYTK---SGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGY 83
GE GSGKSTQ+ Q + +G + VTQP E+ + LG E+GY
Sbjct: 67 GEPGSGKSTQIPQWCAEFALARGFQTGQVTVTQPYPLAAMSLASRVADEMDLTLGHEIGY 126
Query: 84 AIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVK-- 141
+I ED T T++++ D + L+E+ S +SV++LDEA ERS+ +D+L GL++
Sbjct: 127 SIPQEDCTGPNTMLRFCWDRLFLQEVASTRGPGAWSVLVLDEAQERSVASDLLQGLLRDT 186
Query: 142 RLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKER-PTSYLESA 200
RL NL +++T + L+ K F+ N PT++VP + L K+ P +E+A
Sbjct: 187 RLRNLPGDPRVVIVTDSALE-PKFQAFWGNSPTVHVPREPGENPTLTYKDTVPADLVEAA 245
Query: 201 LKTAIDIHVREPE-GDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPP 259
+ +++ RE GDVL+++ +++I L ++ L + V LPLH
Sbjct: 246 CQAVLELCQREEAPGDVLVYLPSEEEISLCCESLSREMGMLAVPGPLPRV-LPLHPGCGQ 304
Query: 260 EMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQ 319
+Q V+ + R+ +V+ +A+ S ++ + +VID G + YNP S + +
Sbjct: 305 AIQT-VYEDTDVSVRKIVVTHWLADFSFSLPFIQHVIDSGLELRSVYNPRIRAESQVLRR 363
Query: 320 ISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLS 379
ISK QA R+ RA PG C RLY + E + P++ +L+ VL LK ++
Sbjct: 364 ISKCQAEARLLRARGFPPGTCLRLYSKSTLDLEAPPLPHPKVCEENLSSLVLLLKRKQIA 423
Query: 380 DINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMAGTSFFALP 432
+ + FLD P+ E+L AL+ L + A+D++G ++ +G + S F LP
Sbjct: 424 EPG--ECHFLDRPAPEALMQALEDLDYLAALDDDGDLSDLGIIL---SEFPLP 471
>ASPGD|ASPL0000008624 [details] [associations]
symbol:AN5839 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 OrthoDB:EOG4TXG12 RefSeq:XP_663443.1
EnsemblFungi:CADANIAT00007203 GeneID:2870747 KEGG:ani:AN5839.2
HOGENOM:HOG000213693 OMA:KNIRRAI Uniprot:Q5B0U1
Length = 1436
Score = 269 (99.8 bits), Expect = 4.2e-43, Sum P(2) = 4.2e-43
Identities = 66/211 (31%), Positives = 110/211 (52%)
Query: 216 VLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDA-VILPLHGSLPPEMQVRVFSPPPPNCR 274
+L+F+ G +I +L +L L E + +I LH S+ + Q + F PP R
Sbjct: 922 ILVFLPGMAEIRRLNDEL------LSEPTFQHGWIIHALHSSIASDEQEKAFVVPPDGMR 975
Query: 275 RFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGR 334
+ +++TNIAET +T+ + VID G K +++ + L IS+ A QR GRAGR
Sbjct: 976 KIVIATNIAETGITIPDITAVIDAGKEKTMRFDERRQLSRLVEAFISRANAKQRRGRAGR 1035
Query: 335 TRPGKCYRLYPSTVYHDEFL-DVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPS 393
+ G C+ ++ HD L + PE+ R SL VL +K L ++ + LDPPS
Sbjct: 1036 VQRGICFHMFTKH-RHDNLLAEQQTPEMLRLSLQDLVLRVKICKLGEVEPTLLEALDPPS 1094
Query: 394 SESLEDALKQLYLIDAIDENGSITSIGRTMA 424
S+++ A+ L + A+ ++T +G+ +A
Sbjct: 1095 SKNIRRAIDALKEVKALTSTENLTPLGQQLA 1125
Score = 262 (97.3 bits), Expect = 4.2e-43, Sum P(2) = 4.2e-43
Identities = 72/223 (32%), Positives = 111/223 (49%)
Query: 4 LPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI---IGVTQPXXX 60
LPI ++ I ETGSGKSTQ+ + H SG I VT+P
Sbjct: 645 LPIWTFKNEILNTLNSHRALIICSETGSGKSTQIPSFILEHEML-SGRPCKIYVTEPRRI 703
Query: 61 XXXXXXXXXXQELGVR---LGEE---VGYAIRFEDRTSERTLIKYLTDGVLLREILSNPD 114
+ELG +G +G+A+R E + S T + + T GV++R +L PD
Sbjct: 704 SAISLARRVSEELGESKNDVGTSRSLIGFAVRLESKVSPATRLVFATTGVVVR-MLERPD 762
Query: 115 -LSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCP 173
+ ++LDE HERS+++D LL +++RL+ R LK+++ SAT+D + S + P
Sbjct: 763 DFQDITHVVLDEVHERSIDSDFLLIVLRRLMQKRQD-LKLILMSATVDANRFSTYLGGVP 821
Query: 174 TLNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDV 216
LN+PG+ +PVE T +LE A++ E E +V
Sbjct: 822 VLNIPGRTFPVE--------TKFLEDAIELT-QYRTTENESNV 855
Score = 39 (18.8 bits), Expect = 9.5e-20, Sum P(2) = 9.5e-20
Identities = 10/50 (20%), Positives = 23/50 (46%)
Query: 186 ILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLED 235
++ ERP + + ++H R + D L+ + + +L+ K +D
Sbjct: 754 VVRMLERPDDFQDITHVVLDEVHERSIDSDFLLIV-----LRRLMQKRQD 798
>UNIPROTKB|Q3ZBE0 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0004386
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 EMBL:BC103411 IPI:IPI00704154
RefSeq:NP_001030399.1 UniGene:Bt.49583 PRIDE:Q3ZBE0
Ensembl:ENSBTAT00000033191 GeneID:517947 KEGG:bta:517947 CTD:165545
InParanoid:Q3ZBE0 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3
NextBio:20872543 Uniprot:Q3ZBE0
Length = 719
Score = 453 (164.5 bits), Expect = 2.3e-42, P = 2.3e-42
Identities = 126/403 (31%), Positives = 204/403 (50%)
Query: 27 GETGSGKSTQLSQ-----ILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEV 81
GE G GKSTQ+ Q +L R G+ K G + VTQP E+ + LG EV
Sbjct: 70 GEPGCGKSTQIPQWCAEFVLAR-GFQK-GWVTVTQPYPLAALSLALRVADEMDLTLGHEV 127
Query: 82 GYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVK 141
GY+I ED T TL+++ D +LL+E+ S V+ILDEA ERS+ +D+L GL++
Sbjct: 128 GYSIPQEDCTGPDTLLRFCWDRLLLQEVASTRGTGARGVLILDEAQERSVASDLLQGLLR 187
Query: 142 --RLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL--YPVEILHSKERPTSYL 197
RL +L +++T +L+ K+ F+ PT+ VP K P + + P +
Sbjct: 188 DARLGSLPGDLRVVVVTDPSLE-PKLQDFWGGPPTVCVPRKTGSCPTPV-YRDSLPADRV 245
Query: 198 ESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSL 257
++A + ++ E GDVL+++ +++I L K+RSL E +LPLH
Sbjct: 246 DAACQAVLEWCQEEAPGDVLVYLPSEEEISLCCESLSRKVRSL-ENQGPPPRVLPLHPGC 304
Query: 258 PPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDV 317
+Q V+ R+ +V+ +A+ S ++ + +VID G + Y+P S +
Sbjct: 305 GQAVQA-VYEDTESGARKVVVTHWLADFSFSLPSIRHVIDSGLELRSVYSPQIRAESQVL 363
Query: 318 VQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLD 377
+SK QA R RA PG C LYP + E + P + +L+ +L LK
Sbjct: 364 RPVSKCQAEARRLRAAGIPPGSCLCLYPKSFLELEAPYLPQPRVWAENLSSLMLLLKRRQ 423
Query: 378 LSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIG 420
+++ K FLD P+ E+L AL+ L + A+D++G ++ +G
Sbjct: 424 IAEPG--KCHFLDRPAPEALMQALEDLDYLAALDDDGDLSDLG 464
>TIGR_CMR|SPO_0972 [details] [associations]
symbol:SPO_0972 "ATP-dependent helicase HrpB"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004386 "helicase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI InterPro:IPR010225 InterPro:IPR013689
Pfam:PF08482 PIRSF:PIRSF005496 TIGRFAMs:TIGR01970
RefSeq:YP_166224.1 ProteinModelPortal:Q5LUT1 GeneID:3192888
KEGG:sil:SPO0972 PATRIC:23375231 HOGENOM:HOG000244610
ProtClustDB:CLSK933398 Uniprot:Q5LUT1
Length = 816
Score = 454 (164.9 bits), Expect = 3.4e-42, P = 3.4e-42
Identities = 130/401 (32%), Positives = 200/401 (49%)
Query: 30 GSGKSTQLSQILHRHGYTKSGIIGVTQPXXXXXXXXXXXXXQELGVRLGEEVGYAIRFED 89
G+GK+T++ L G T I+ + +P + LG +G+ VGY IR E
Sbjct: 30 GAGKTTRVPLALLSAGLTNGRIV-MLEPRRLAARAAAERMAETLGEPVGQTVGYRIRGEA 88
Query: 90 RTSERTLIKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRAS 149
+ + T I+ +T+G+L R + + PDL +I DE HERSLN D+ L L +
Sbjct: 89 KRTNATRIEVVTEGILTRMLQAEPDLPGIGAVIFDEFHERSLNADLGLALCLEVTEALRD 148
Query: 150 KLKILITSATLDGEKVSKFFSNCPTLNVPGKLYPVEI--LHSKERPTSYLESALKTAI-- 205
L +L SATLD V+ + P + G+ YPVE L P + AL +
Sbjct: 149 DLILLAMSATLDAGPVAALM-DAPMVTSQGRAYPVETRWLDHPLGPRARRVEALADLVAK 207
Query: 206 -DIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVR 264
+ R+ G +L+F+ G+ +I + + L ++ SC + PL G++P Q R
Sbjct: 208 AEAETRDLGGSLLVFLPGEGEIRRAQTLLSARLPD----SC---TLRPLFGAMPFAAQ-R 259
Query: 265 VFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQ 324
P R +++T+IAETSLT+ V V+D G ++ +++P SGM L ++++ +
Sbjct: 260 AAIRPATEGRNVVLATSIAETSLTIPDVRVVVDMGQARRARFDPGSGMTRLVTERVTRAE 319
Query: 325 ANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVP-EIQRSSLAGSVLYLKSLDLSDINV 383
A QR GRAGR G CYRL+ T + L P EI+ + L G L L +L ++
Sbjct: 320 ATQRAGRAGRVAEGICYRLW--TRGEEGALAAFPPAEIEAADLTGLALEL-ALWGAEPGA 376
Query: 384 LKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
L F PP + +L +A L + AID G IT GR +A
Sbjct: 377 LGF-VTQPPET-ALAEARALLGFLGAIDAQGRITDHGRVLA 415
>WB|WBGene00009922 [details] [associations]
symbol:F52B5.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00393 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:Z75541
PIR:T22493 RefSeq:NP_492260.1 ProteinModelPortal:Q20644 SMR:Q20644
STRING:Q20644 PaxDb:Q20644 EnsemblMetazoa:F52B5.3 GeneID:172615
KEGG:cel:CELE_F52B5.3 UCSC:F52B5.3 CTD:172615 WormBase:F52B5.3
InParanoid:Q20644 OMA:NSMPETQ NextBio:876269 Uniprot:Q20644
Length = 1425
Score = 270 (100.1 bits), Expect = 3.4e-42, Sum P(2) = 3.4e-42
Identities = 60/198 (30%), Positives = 111/198 (56%)
Query: 214 GDVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNC 273
G +L+F+ G +DI++++ ++ SL + + ++LPLH + +F P +
Sbjct: 645 GTILVFLPGYEDIQQMLKAIDCWKNSLK--NMKNVIVLPLHSQMTSINHGDIFKSVPKDT 702
Query: 274 RRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAG 333
R+ I++TNIAE S+T++ V++V+D G VK++ ++ + + +L V I++ A+QR GRAG
Sbjct: 703 RKIILATNIAEASITIEDVIFVVDTGKVKEKSFDHEAKLSTLTVKPIARSNADQRSGRAG 762
Query: 334 RTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFL--DP 391
R G C RLY Y+ + + E++R+++ L+ K + + +F L +P
Sbjct: 763 RVANGYCIRLYTEQEYNS-MPETQIAEMKRAAIYDVTLHAKLFAPKTLKISEFLSLAPEP 821
Query: 392 PSSESLEDALKQLYLIDA 409
P ES+ A+ L I A
Sbjct: 822 PEKESILQAITFLEQIGA 839
Score = 252 (93.8 bits), Expect = 3.4e-42, Sum P(2) = 3.4e-42
Identities = 71/259 (27%), Positives = 120/259 (46%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQIL--HRHGYTKSGIIGVTQPXXX 60
+LP +Y + + G TG GK+TQ+ Q + H K + VTQP
Sbjct: 180 SLPASKYCDQVLKSISSCNVVIISGGTGCGKTTQVPQFILDEAHENNKHVRVMVTQPRRI 239
Query: 61 XXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSV 120
+E G +G VGY +R + R S+ T++ Y T GVLLR + S+P S +
Sbjct: 240 AAISIAERVARERGEPIGRTVGYQVRLDSRRSDDTVLTYCTTGVLLRMLTSDPVASGITH 299
Query: 121 IILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDG--EKVSKFFSN--CPTLN 176
I++DE HER +NTD LL ++ + +R LK+++ SAT++G + S +F N +
Sbjct: 300 IVMDEIHEREINTDYLLIALRECLKMRPD-LKVILMSATIEGNMQLFSNYFENHSMDVIR 358
Query: 177 VPGKLYPVEILHSKE--RPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLE 234
+ + + V++ + + T Y K E E +D+IE + + +
Sbjct: 359 IESRAFDVKVFYLDQILAMTGYQPPESKAFFSTAEYEEED-------WKDEIEAVEREEK 411
Query: 235 DKIRSLDEGSCMDAVILPL 253
DK + S + + P+
Sbjct: 412 DKAKQRAADSSLSTLSKPV 430
>UNIPROTKB|Q8NDG6 [details] [associations]
symbol:TDRD9 "Putative ATP-dependent RNA helicase TDRD9"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0031047 "gene silencing by
RNA" evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0034587
"piRNA metabolic process" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0043046 "DNA methylation involved in gamete
generation" evidence=ISS] [GO:0009566 "fertilization" evidence=ISS]
[GO:0007140 "male meiosis" evidence=ISS] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0009566 GO:GO:0007283 GO:GO:0003676
GO:GO:0031047 GO:GO:0007140 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0034587 eggNOG:COG1643 GO:GO:0008026
GO:GO:0071547 EMBL:AL136001 OMA:INDWFTI EMBL:AL132712 EMBL:AL833915
EMBL:AK093483 EMBL:AK097429 EMBL:AK097699 EMBL:AK125978
EMBL:BC016796 EMBL:BC128057 IPI:IPI00384419 IPI:IPI00413613
PIR:G02632 RefSeq:NP_694591.2 UniGene:Hs.21454
ProteinModelPortal:Q8NDG6 SMR:Q8NDG6 STRING:Q8NDG6
PhosphoSite:Q8NDG6 DMDM:290457664 PaxDb:Q8NDG6 PRIDE:Q8NDG6
Ensembl:ENST00000339063 Ensembl:ENST00000409874 GeneID:122402
KEGG:hsa:122402 UCSC:uc001yom.4 UCSC:uc001yon.4 CTD:122402
GeneCards:GC14P104394 HGNC:HGNC:20122 HPA:HPA038120
neXtProt:NX_Q8NDG6 PharmGKB:PA134890186 InParanoid:Q8NDG6
OrthoDB:EOG4F4S96 GenomeRNAi:122402 NextBio:80877 Bgee:Q8NDG6
CleanEx:HS_TDRD9 Genevestigator:Q8NDG6 Uniprot:Q8NDG6
Length = 1382
Score = 263 (97.6 bits), Expect = 9.9e-42, Sum P(2) = 9.9e-42
Identities = 75/219 (34%), Positives = 107/219 (48%)
Query: 216 VLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRR 275
VL+F+ G +I + + + + SL + PLH S+ E Q VF P P R+
Sbjct: 388 VLVFLPGLGEI----NYMHELLTSLVHKRLQ---VYPLHSSVALEEQNNVFLSPVPGYRK 440
Query: 276 FIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRT 335
I+STNIAE+S+TV V YVID + + + SL + SK NQR GRAGR
Sbjct: 441 IILSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRV 500
Query: 336 RPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSE 395
G CYRL + + D VPE+ R L ++L +K LD+ + L L PP
Sbjct: 501 SRGYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVKLLDMGEPRALLATALSPPGLS 560
Query: 396 SLEDALKQLYLIDAI-------DEN---GSITSIGRTMA 424
+E + L + A+ DEN G +T +GR +A
Sbjct: 561 DIERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLA 599
Score = 256 (95.2 bits), Expect = 9.9e-42, Sum P(2) = 9.9e-42
Identities = 69/208 (33%), Positives = 105/208 (50%)
Query: 3 NLPILQYEETIXXXXXXXXXXXXIGETGSGKSTQLSQILHRHGYTKSGI--IGVTQPXXX 60
+LPI +Y+E + G TGSGKSTQL Q + H +S I VTQP
Sbjct: 131 DLPISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDHYVQRSAYCSIVVTQPRKI 190
Query: 61 XXXXXXXXXXQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSV 120
+E LG VGY + E +E T + Y+T GVLL++I+S L ++
Sbjct: 191 GASSIARWISKERAWTLGGVVGYQVGLEKIATEDTRLIYMTTGVLLQKIVSAKSLMEFTH 250
Query: 121 IILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGK 180
II+DE HER+ D LL +V++L+ + +K+++ SAT+ ++ + +F+ P N K
Sbjct: 251 IIIDEVHERTEEMDFLLLVVRKLLRTNSRFVKVVLMSATISCKEFADYFA-VPVQN---K 306
Query: 181 LYPVEILHSKERPTSYLESALKTAIDIH 208
+ P I + +P S E L IH
Sbjct: 307 MNPAYIFEVEGKPHSVEEYYLNDLEHIH 334
WARNING: HSPs involving 58 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.137 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 432 407 0.00078 118 3 11 22 0.42 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 308
No. of states in DFA: 591 (63 KB)
Total size of DFA: 210 KB (2117 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.63u 0.09s 35.72t Elapsed: 00:00:01
Total cpu time: 35.69u 0.09s 35.78t Elapsed: 00:00:01
Start: Tue May 21 02:49:09 2013 End: Tue May 21 02:49:10 2013
WARNINGS ISSUED: 2