BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014006
(432 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q38953|DHX8_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2
Length = 1168
Score = 466 bits (1200), Expect = e-130, Method: Compositional matrix adjust.
Identities = 222/422 (52%), Positives = 313/422 (74%), Gaps = 4/422 (0%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAA 62
+LPI + ++ +++ V N V+VVIGETGSGK+TQ++Q L GYT G IG TQPRRVAA
Sbjct: 514 SLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQPRRVAA 573
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+SVA+RVA+E G RLGEEVGYAIRFED T T+IKY+TDG+LLREIL + +LS YSVI+
Sbjct: 574 MSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIM 633
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+++TD+L GL+K+L+ R L++++TSATLD EK S +F NC +PG+ +
Sbjct: 634 LDEAHERTIHTDVLFGLLKKLMKRRLD-LRLIVTSATLDAEKFSGYFFNCNIFTIPGRTF 692
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVEIL++K+ T YL++AL T + IH+ EPEGD+L+F+TGQ++I+ L ++++ L +
Sbjct: 693 PVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMKGLGK 752
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ + +ILP++ +LP EMQ R+F PPPP R+ +V+TNIAE SLT+DG+ YV+D G+ K
Sbjct: 753 -NVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAK 811
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q YNP G+ SL + IS+ A QR GRAGRT PGKCYRLY + Y +E ++PEIQ
Sbjct: 812 QNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQ 871
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R +L + L +K++ ++D+ L FDF+DPP ++L A++QLY + A+DE G +T +GR
Sbjct: 872 RINLGMTTLTMKAMGINDL--LSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTKLGRK 929
Query: 423 MA 424
MA
Sbjct: 930 MA 931
>sp|A2A4P0|DHX8_MOUSE ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1
Length = 1244
Score = 462 bits (1188), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/422 (52%), Positives = 311/422 (73%), Gaps = 4/422 (0%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAA 62
+LPI + +E +V+ V N +++VIGETGSGK+TQ++Q L GYT G IG TQPRRVAA
Sbjct: 588 SLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAA 647
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+SVA+RV++E G LG+EVGY IRFED TS T+IKY+TDG+LLRE L +PDL+ Y++I+
Sbjct: 648 MSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIM 707
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+++TD+L GL+K+ V R +K+++TSATLD K S++F P +PG+ Y
Sbjct: 708 LDEAHERTIHTDVLFGLLKKTVQKRQD-MKLIVTSATLDAVKFSQYFYEAPIFTIPGRTY 766
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVEIL++KE T YL+++L T + IH+ EP GD+L+F+TGQ++I+ L ++++SL
Sbjct: 767 PVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGP 826
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ +ILP++ +LP EMQ R+F P PP R+ +++TNIAETSLT+DG+ YV+D G+VK
Sbjct: 827 -DVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVK 885
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q+ YN +G+ L V IS+ QA QR GRAGRT PGKCYRLY Y DE L VPEIQ
Sbjct: 886 QKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQ 945
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R++LA +VL LK++ ++D+ L FDF+D P E+L A++QLY + A+D+ G +T +GR
Sbjct: 946 RTNLASTVLSLKAMGINDL--LSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 1003
Query: 423 MA 424
MA
Sbjct: 1004 MA 1005
>sp|Q14562|DHX8_HUMAN ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1
Length = 1220
Score = 462 bits (1188), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/422 (52%), Positives = 311/422 (73%), Gaps = 4/422 (0%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAA 62
+LPI + +E +V+ V N +++VIGETGSGK+TQ++Q L GYT G IG TQPRRVAA
Sbjct: 564 SLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAA 623
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+SVA+RV++E G LG+EVGY IRFED TS T+IKY+TDG+LLRE L +PDL+ Y++I+
Sbjct: 624 MSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIM 683
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+++TD+L GL+K+ V R +K+++TSATLD K S++F P +PG+ Y
Sbjct: 684 LDEAHERTIHTDVLFGLLKKTVQKRQD-MKLIVTSATLDAVKFSQYFYEAPIFTIPGRTY 742
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVEIL++KE T YL+++L T + IH+ EP GD+L+F+TGQ++I+ L ++++SL
Sbjct: 743 PVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGP 802
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ +ILP++ +LP EMQ R+F P PP R+ +++TNIAETSLT+DG+ YV+D G+VK
Sbjct: 803 -DVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVK 861
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q+ YN +G+ L V IS+ QA QR GRAGRT PGKCYRLY Y DE L VPEIQ
Sbjct: 862 QKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQ 921
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R++LA +VL LK++ ++D+ L FDF+D P E+L A++QLY + A+D+ G +T +GR
Sbjct: 922 RTNLASTVLSLKAMGINDL--LSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 979
Query: 423 MA 424
MA
Sbjct: 980 MA 981
>sp|Q54F05|DHX8_DICDI ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8
PE=3 SV=1
Length = 1160
Score = 454 bits (1167), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/423 (51%), Positives = 315/423 (74%), Gaps = 6/423 (1%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAA 62
+LPI E ++ V ++ ++VVIGETGSGK+TQ++Q L GY G IG TQPRRVAA
Sbjct: 507 SLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTRGKIGCTQPRRVAA 566
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+SV++RVA+E G +LG+EVGYAIRFED TS T+IK++TDG+LLRE L +P+LS YSVII
Sbjct: 567 MSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECLLDPNLSAYSVII 626
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+++TD+L GL+K+ + R +LK+LITSATL+ EK SK+F N +PG+ +
Sbjct: 627 LDEAHERTISTDVLFGLLKQALQ-RRPELKVLITSATLEAEKFSKYFMNAQLFIIPGRTF 685
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PV+I ++K+ YL+++L T + IH+ EP GD+L+F+TGQ++I+ L ++++SL
Sbjct: 686 PVDIRYTKDPEADYLDASLITVMQIHLSEPPGDILLFLTGQEEIDAACQILYERMKSL-- 743
Query: 243 GSCM-DAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYV 301
GS + D +ILP++ +LP EMQ ++F P PP R+ +++TNIAETSLT+DG+ YVID G+
Sbjct: 744 GSNVPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFS 803
Query: 302 KQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEI 361
KQ+ +NP +GM SL V IS+ A QR GRAGRT PGKCYRLY + + +E L ++PEI
Sbjct: 804 KQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKNEMLASSIPEI 863
Query: 362 QRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGR 421
QR++L +VL +K++ ++D+ L FDF+DPP ++L A++QLY + A+DE G +T +GR
Sbjct: 864 QRTNLGNTVLTMKAMGINDL--LNFDFMDPPPVQTLVSAMEQLYSLGALDEEGLLTRLGR 921
Query: 422 TMA 424
MA
Sbjct: 922 KMA 924
>sp|Q767K6|DHX16_PIG Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Sus scrofa GN=DHX16 PE=3 SV=1
Length = 1045
Score = 454 bits (1167), Expect = e-127, Method: Compositional matrix adjust.
Identities = 215/423 (50%), Positives = 303/423 (71%), Gaps = 5/423 (1%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPRRVA 61
+LP+ + E ++ V + ++++ GETGSGK+TQ+ Q L GYT+ G+ I TQPRRVA
Sbjct: 402 SLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACTQPRRVA 461
Query: 62 AVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
A+SVA RVA+E+GV+LG EVGY+IRFED TSERT+++Y+TDG+LLRE LS PDL+ YSV+
Sbjct: 462 AMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVV 521
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
++DEAHER+L+TDIL GL+K + R +LK+L+ SATLD + S FF + P +PG+
Sbjct: 522 MVDEAHERTLHTDILFGLIKDVARFR-PELKVLVASATLDTARFSTFFDDAPVFRIPGRR 580
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLD 241
+PV+I ++K YLE+ + + + IHV +P GD+L+F+TGQ++IE L+D+ R L
Sbjct: 581 FPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLG 640
Query: 242 EGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYV 301
+ ++LP++ +LP +MQ R+F P PP R+ +V+TNIAETSLT++G++YV+D G+
Sbjct: 641 -SKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFC 699
Query: 302 KQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEI 361
KQ+ YNP +GM SL V SK ANQR GRAGR GKC+RLY + Y E + TVPEI
Sbjct: 700 KQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEI 759
Query: 362 QRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGR 421
QR+SL VL LKSL + D+ + FDFLDPP E+L AL+QLY + A++ G +T+ GR
Sbjct: 760 QRTSLGNVVLLLKSLGIHDL--MHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGR 817
Query: 422 TMA 424
MA
Sbjct: 818 KMA 820
>sp|Q7YR39|DHX16_PANTR Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Pan troglodytes GN=DHX16 PE=3 SV=1
Length = 1044
Score = 453 bits (1165), Expect = e-126, Method: Compositional matrix adjust.
Identities = 214/423 (50%), Positives = 302/423 (71%), Gaps = 5/423 (1%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPRRVA 61
+LP+ + E ++ + + V+++ GETGSGK+TQ+ Q L GYT G+ I TQPRRVA
Sbjct: 401 SLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVA 460
Query: 62 AVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
A+SVA RVA+E+GV+LG EVGY+IRFED TSERT+++Y+TDG+LLRE LS PDL+ YSV+
Sbjct: 461 AMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVV 520
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
++DEAHER+L+TDIL GL+K + R +LK+L+ SAT+D + S FF + P +PG+
Sbjct: 521 MVDEAHERTLHTDILFGLIKDVARFR-PELKVLVASATMDTARFSTFFDDAPVFRIPGRR 579
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLD 241
+PV+I ++K YLE+ + + + IHV +P GD+L+F+TGQ++IE L+D+ R L
Sbjct: 580 FPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLG 639
Query: 242 EGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYV 301
+ ++LP++ +LP +MQ R+F P PP R+ +V+TNIAETSLT++G++YV+D G+
Sbjct: 640 -SKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFC 698
Query: 302 KQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEI 361
KQ+ YNP +GM SL V SK ANQR GRAGR GKC+RLY + Y E + TVPEI
Sbjct: 699 KQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEI 758
Query: 362 QRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGR 421
QR+SL VL LKSL + D+ + FDFLDPP E+L AL+QLY + A++ G +T+ GR
Sbjct: 759 QRTSLGNVVLLLKSLGIHDL--MHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGR 816
Query: 422 TMA 424
MA
Sbjct: 817 KMA 819
>sp|O60231|DHX16_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Homo sapiens GN=DHX16 PE=1 SV=2
Length = 1041
Score = 453 bits (1165), Expect = e-126, Method: Compositional matrix adjust.
Identities = 214/423 (50%), Positives = 302/423 (71%), Gaps = 5/423 (1%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPRRVA 61
+LP+ + E ++ + + V+++ GETGSGK+TQ+ Q L GYT G+ I TQPRRVA
Sbjct: 398 SLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVA 457
Query: 62 AVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
A+SVA RVA+E+GV+LG EVGY+IRFED TSERT+++Y+TDG+LLRE LS PDL+ YSV+
Sbjct: 458 AMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVV 517
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
++DEAHER+L+TDIL GL+K + R +LK+L+ SAT+D + S FF + P +PG+
Sbjct: 518 MVDEAHERTLHTDILFGLIKDVARFR-PELKVLVASATMDTARFSTFFDDAPVFRIPGRR 576
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLD 241
+PV+I ++K YLE+ + + + IHV +P GD+L+F+TGQ++IE L+D+ R L
Sbjct: 577 FPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLG 636
Query: 242 EGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYV 301
+ ++LP++ +LP +MQ R+F P PP R+ +V+TNIAETSLT++G++YV+D G+
Sbjct: 637 -SKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFC 695
Query: 302 KQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEI 361
KQ+ YNP +GM SL V SK ANQR GRAGR GKC+RLY + Y E + TVPEI
Sbjct: 696 KQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEI 755
Query: 362 QRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGR 421
QR+SL VL LKSL + D+ + FDFLDPP E+L AL+QLY + A++ G +T+ GR
Sbjct: 756 QRTSLGNVVLLLKSLGIHDL--MHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGR 813
Query: 422 TMA 424
MA
Sbjct: 814 KMA 816
>sp|Q92620|PRP16_HUMAN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo
sapiens GN=DHX38 PE=1 SV=2
Length = 1227
Score = 450 bits (1157), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/420 (51%), Positives = 302/420 (71%), Gaps = 5/420 (1%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAAV 63
LPI ++ ++ + N +V+V+GETGSGK+TQL+Q LH GYT G+IG TQPRRVAA+
Sbjct: 532 LPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAM 591
Query: 64 SVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
SVA+RV++E+G LGEEVGYAIRFED TSE TLIKY+TDG+LLRE L DL YS II+
Sbjct: 592 SVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIM 651
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYP 183
DEAHERSLNTD+L GL++ +V R S LK+++TSAT+D EK + FF N P ++PG+ +P
Sbjct: 652 DEAHERSLNTDVLFGLLREVV-ARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFP 710
Query: 184 VEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEG 243
V+IL SK Y+E+A+K ++ +H+ GD+LIFM GQ+DIE ++ + + L+
Sbjct: 711 VDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENA 770
Query: 244 SCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQ 303
+ +LP++ LP ++Q ++F P R+ IV+TNIAETSLTVDG+++VID GY K
Sbjct: 771 PAL--AVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKL 828
Query: 304 RQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQR 363
+ +NP GM +L + IS+ ANQR GRAGRT PG+C+RLY + Y +E L TVPEIQR
Sbjct: 829 KVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQR 888
Query: 364 SSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTM 423
++LA VL LKSL + D+ L+F F+DPP +++ +++ QL+++ A+D G +TS GR M
Sbjct: 889 TNLANVVLLLKSLGVQDL--LQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLM 946
>sp|Q17R09|PRP16_BOVIN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Bos
taurus GN=DHX38 PE=2 SV=1
Length = 1227
Score = 449 bits (1156), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/420 (51%), Positives = 302/420 (71%), Gaps = 5/420 (1%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAAV 63
LPI ++ ++ + N +V+V+GETGSGK+TQL+Q LH GYT G+IG TQPRRVAA+
Sbjct: 532 LPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAM 591
Query: 64 SVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
SVA+RV++E+G LGEEVGYAIRFED TSE TLIKY+TDG+LLRE L DL YS II+
Sbjct: 592 SVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIM 651
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYP 183
DEAHERSLNTD+L GL++ +V R S LK+++TSAT+D EK + FF N P ++PG+ +P
Sbjct: 652 DEAHERSLNTDVLFGLLREVV-ARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFP 710
Query: 184 VEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEG 243
V+IL SK Y+E+A+K ++ +H+ GD+LIFM GQ+DIE ++ + + L+
Sbjct: 711 VDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENA 770
Query: 244 SCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQ 303
+ +LP++ LP ++Q ++F P R+ IV+TNIAETSLTVDG+++VID GY K
Sbjct: 771 PAL--AVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKL 828
Query: 304 RQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQR 363
+ +NP GM +L + IS+ ANQR GRAGRT PG+C+RLY + Y +E L TVPEIQR
Sbjct: 829 KVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQR 888
Query: 364 SSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTM 423
++LA VL LKSL + D+ L+F F+DPP +++ +++ QL+++ A+D G +TS GR M
Sbjct: 889 TNLANVVLLLKSLGVQDL--LQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLM 946
>sp|Q54MH3|DHX16_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Dictyostelium discoideum GN=dhx16 PE=3 SV=1
Length = 1106
Score = 448 bits (1152), Expect = e-125, Method: Compositional matrix adjust.
Identities = 202/422 (47%), Positives = 311/422 (73%), Gaps = 4/422 (0%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAA 62
+LP+ Y E +++ V + V++++GETGSGK+TQ+ Q LH G++K+G IG TQPRRVAA
Sbjct: 466 SLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGKIGCTQPRRVAA 525
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+SVA RVA+E+G +LG EVGY+IRFED TS++T+++Y+TDG+L+RE L+ PDL+ YSV+I
Sbjct: 526 MSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFLTAPDLASYSVLI 585
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
+DEAHER+L+TDIL GL+K + R LK+LI+SAT+D E+ S +F PT N+PG+ Y
Sbjct: 586 IDEAHERTLHTDILFGLLKDITRFRPD-LKLLISSATMDAERFSDYFDGAPTFNIPGRKY 644
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
V +++ YL++A+ T + IH+ EP GD+L+F+TGQ+++++ L+ + R L
Sbjct: 645 EVTTHYTQAPEADYLDAAVVTVLQIHITEPLGDILVFLTGQEEVDQAAEMLQTRTRGLG- 703
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ +I ++ +LP ++Q ++F P PPN R+ +++TNIAETSLT+DG++YVID G+ K
Sbjct: 704 TKIKELIITRIYSTLPTDLQAKIFEPTPPNARKVVLATNIAETSLTIDGIIYVIDPGFCK 763
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q+ +NP +GM SL + +S+ ANQR GRAGR PGKC+RL+ + + +E + T+PEIQ
Sbjct: 764 QKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPGKCFRLFTAWAFDNELEENTIPEIQ 823
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R++L VL LKS+ ++D+ + FDF+DPP +++L AL+QLY + A+++ G +T +GR
Sbjct: 824 RTNLGNVVLLLKSMGINDL--MNFDFMDPPPAQTLIAALEQLYALGALNDRGQLTKLGRK 881
Query: 423 MA 424
MA
Sbjct: 882 MA 883
>sp|O42643|PRP22_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp22 PE=1 SV=1
Length = 1168
Score = 446 bits (1148), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/422 (51%), Positives = 309/422 (73%), Gaps = 5/422 (1%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTK-SGIIGVTQPRRVAA 62
LP+ + + +E V +N ++V++GETGSGK+TQ++Q L GYT S +IG TQPRRVAA
Sbjct: 510 LPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIGCTQPRRVAA 569
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+SVA+RVA+E+G R+GEEVGY IRFED+TS T IKY+TDG+L RE L +P LS YSVII
Sbjct: 570 MSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVDPLLSKYSVII 629
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER++ TD+L GL+K V L+ LK+++TSATLD E+ S +F CP +PG+ Y
Sbjct: 630 LDEAHERTVATDVLFGLLKGTV-LKRPDLKLIVTSATLDAERFSSYFYKCPIFTIPGRSY 688
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVEI+++K+ YL++AL T + IH+ E GD+L+F+TGQ++I+ L ++ + L +
Sbjct: 689 PVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSCEILYERSKMLGD 748
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
S + VILP++ +LP E+Q R+F P PP R+ +++TNIAETSLT+DG+ YV+D G+VK
Sbjct: 749 -SIPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVDPGFVK 807
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q ++P GM SL V IS+ QA QR GRAGRT PGKCYRLY + Y +E L +PEIQ
Sbjct: 808 QSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYRNEMLPSPIPEIQ 867
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R +L+ ++L LK++ ++D+ L FDF+DPP ++++ AL+ LY + A+D+ G +T +GR
Sbjct: 868 RQNLSHTILMLKAMGINDL--LNFDFMDPPPAQTMIAALQNLYALSALDDEGLLTPLGRK 925
Query: 423 MA 424
MA
Sbjct: 926 MA 927
>sp|P34498|MOG1_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1
OS=Caenorhabditis elegans GN=mog-1 PE=1 SV=2
Length = 1131
Score = 446 bits (1148), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/421 (50%), Positives = 303/421 (71%), Gaps = 6/421 (1%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAAV 63
LP+ + ++ + +N VV+++GETGSGK+TQL+Q L G+ SG+IG TQPRRVAA+
Sbjct: 441 LPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSGLIGCTQPRRVAAM 500
Query: 64 SVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
SVARRVA E+GV LG++VGYAIRFED TSE+T+IKY+TDG+LLRE L + L YS II+
Sbjct: 501 SVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSLDQYSAIIM 560
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFF-SNCPTLNVPGKLY 182
DEAHERSLNTD+L GL++ ++ RA LK+++TSAT+D +K + FF NCPT +PG+ +
Sbjct: 561 DEAHERSLNTDVLFGLLREVIAKRAD-LKLIVTSATMDADKFADFFGGNCPTFTIPGRTF 619
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVE+ H++ Y+++A+K A+ IH+ +GD+LIFM GQ+DIE +++K+ LDE
Sbjct: 620 PVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDIECTCEMIKEKLGELDE 679
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ +LP++ LP ++Q ++F P R+ IV+TNIAETSLTVDG+++VID G+ K
Sbjct: 680 APPL--AVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILFVIDPGFCK 737
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
+ YNP GM +L + +S+ ANQR GRAGRT PG+CYRLY + DE L TVPEIQ
Sbjct: 738 MKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDELLKSTVPEIQ 797
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R++LA VL LKSL + D+ LKF F+D P +++ +++ QL+ + A+D G +T +GR
Sbjct: 798 RTNLANVVLLLKSLGVDDL--LKFHFMDAPPQDNMLNSMYQLWTLGALDNTGQLTPMGRK 855
Query: 423 M 423
M
Sbjct: 856 M 856
>sp|Q10752|CDC28_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
cdc28 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=cdc28 PE=3 SV=2
Length = 1055
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/424 (51%), Positives = 307/424 (72%), Gaps = 7/424 (1%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTK-SGIIGVTQPRRVA 61
+LP+ QY++ +++ + + V++++ ETGSGK+TQL Q LH GYTK + I TQPRRVA
Sbjct: 417 SLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKICCTQPRRVA 476
Query: 62 AVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
A+SVA RVA+E+ VRLG+EVGY+IRFE+ TSE+T+IKYLTDG+LLRE L+ PDL+ YSVI
Sbjct: 477 AMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEPDLASYSVI 536
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
I+DEAHER+L+TDIL GLVK + R LK+LI+SAT+D EK S +F P VPG+
Sbjct: 537 IIDEAHERTLHTDILFGLVKDIARFRPD-LKVLISSATIDAEKFSAYFDEAPVFYVPGRR 595
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLD 241
YPV+I ++ + +Y+++A+ T + IH +P GD+L+F+TGQD+IE + +++ R L
Sbjct: 596 YPVDIYYTPQPEANYIQAAITTILQIHTTQPAGDILVFLTGQDEIELMSENMQELCRIL- 654
Query: 242 EGSCMDAVIL-PLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGY 300
G + +IL P++ +LP E+Q ++F P PP R+ +++TNIAETS+T+DGV +VID G+
Sbjct: 655 -GKRIPEIILCPIYANLPSELQAKIFDPTPPGARKVVLATNIAETSITIDGVNFVIDSGF 713
Query: 301 VKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPE 360
VKQ YNP +GM SL V S+ A+QR GRAGR PGKC+RLY Y++E VT PE
Sbjct: 714 VKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTRRTYNNELDMVTSPE 773
Query: 361 IQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIG 420
IQR++L VL LKSL ++ N+L FDF+D P E+L +L+ LY + A++ G +T +G
Sbjct: 774 IQRTNLTNIVLLLKSLGIN--NLLDFDFMDAPPPETLMRSLELLYALGALNNRGELTKLG 831
Query: 421 RTMA 424
R MA
Sbjct: 832 RQMA 835
>sp|Q09530|MOG5_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5
OS=Caenorhabditis elegans GN=mog-5 PE=1 SV=1
Length = 1200
Score = 439 bits (1130), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/422 (50%), Positives = 306/422 (72%), Gaps = 4/422 (0%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAA 62
+LPI ++ ++E + N ++VV+GETGSGK+TQ++Q G + G IG TQPRRVAA
Sbjct: 539 SLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRRVAA 598
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+SVA+RVA+E G +LG +VGY IRFED TS+ T+IKY+TDG+LLRE L +PDLS YS+I+
Sbjct: 599 MSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIM 658
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+++TD+L GL+K R +LK++ITSATLD K S++F P +PG+ +
Sbjct: 659 LDEAHERTIHTDVLFGLLKAAARKRP-ELKLIITSATLDSVKFSEYFLEAPIFTIPGRTF 717
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVEIL+++E + YLE+A T + IH+ EP GDVL+F+TGQ++I+ L ++++S+
Sbjct: 718 PVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGP 777
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ +ILP++G+LP EMQ R+F P P R+ +++TNIAETSLT+DG+ YV+D G+VK
Sbjct: 778 -DVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVK 836
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q+ YNP SGM SL V IS+ A QR GRAGRT PGKCYRLY + DE L VPEIQ
Sbjct: 837 QKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQ 896
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R++LA ++L LK++ ++ N++ FDF+D P +S+ AL L+ + A+D +G +T +GR
Sbjct: 897 RTNLASTLLQLKAMGIN--NLIDFDFMDAPPLDSMITALNTLHTLSALDGDGLLTKLGRR 954
Query: 423 MA 424
MA
Sbjct: 955 MA 956
>sp|P24384|PRP22_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP22 PE=1 SV=1
Length = 1145
Score = 436 bits (1121), Expect = e-121, Method: Compositional matrix adjust.
Identities = 202/421 (47%), Positives = 307/421 (72%), Gaps = 4/421 (0%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAAV 63
LP+ +++ V N +V++GETGSGK+TQ++Q L G++ G+IG TQPRRVAAV
Sbjct: 483 LPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGMIGCTQPRRVAAV 542
Query: 64 SVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
SVA+RVA+E+G ++G +VGY IRFED T T IKY+TDG+L RE L +P++S YSVI+L
Sbjct: 543 SVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMSKYSVIML 602
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYP 183
DEAHER++ TD+L L+K+ ++ +LK+++TSATL+ K S++F NCP +N+PGK +P
Sbjct: 603 DEAHERTVATDVLFALLKKAA-IKRPELKVIVTSATLNSAKFSEYFLNCPIINIPGKTFP 661
Query: 184 VEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEG 243
VE+L+S+ Y+E+AL IDIH+ E GD+L+F+TGQ++I+ L D++++L +
Sbjct: 662 VEVLYSQTPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEIDSCCEILYDRVKTLGD- 720
Query: 244 SCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQ 303
S + +ILP++ +LP E+Q ++F P P R+ + +TNIAETS+T+DG+ YV+D G+ K
Sbjct: 721 SIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIAETSITIDGIYYVVDPGFAKI 780
Query: 304 RQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQR 363
YN +G+ L V IS+ QANQR GRAGRT PGKCYRLY + +++E L+ TVPEIQR
Sbjct: 781 NIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEMLENTVPEIQR 840
Query: 364 SSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTM 423
+L+ ++L LK++ ++D+ LKFDF+DPP + +AL +LY + ++D+ G +T++G+ M
Sbjct: 841 QNLSHTILMLKAMGINDL--LKFDFMDPPPKNLMLNALTELYHLQSLDDEGKLTNLGKEM 898
Query: 424 A 424
+
Sbjct: 899 S 899
>sp|O45244|DHX16_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4
OS=Caenorhabditis elegans GN=mog-4 PE=1 SV=2
Length = 1008
Score = 431 bits (1107), Expect = e-120, Method: Compositional matrix adjust.
Identities = 210/425 (49%), Positives = 307/425 (72%), Gaps = 8/425 (1%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPRRVA 61
+LP+ + + +E V+++ V+++ GETGSGK+TQL Q L+ G+ + G IG TQPRRVA
Sbjct: 363 SLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCTQPRRVA 422
Query: 62 AVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
A+SVA RVA E+G +LG +VGY+IRFED TSE+T++KY+TDG+LLRE L+ PDL+ YSV+
Sbjct: 423 AMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDLASYSVM 482
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
++DEAHER+L+TDIL GLVK + R LK+LI+SATLD EK S FF + P +PG+
Sbjct: 483 MIDEAHERTLHTDILFGLVKDIARFRKD-LKLLISSATLDAEKFSSFFDDAPIFRIPGRR 541
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREP-EGDVLIFMTGQDDIEKLVSKLEDKIRSL 240
+PV+I +++ Y+++A+ T + IH+ +P GD+L+F+TGQ++IE + L ++ ++L
Sbjct: 542 FPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQEALMERSKAL 601
Query: 241 DEGSCMDAVI-LPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCG 299
GS + +I LP++ +LP ++Q ++F P P + R+ +++TNIAETS+T+DG+ YVID G
Sbjct: 602 --GSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPG 659
Query: 300 YVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVP 359
+ KQ ++ SG+ L VV ISK ANQR GRAGRT PGKC+RLY + Y E + +P
Sbjct: 660 FSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQPIP 719
Query: 360 EIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSI 419
EIQR++L VL LKSL + D+ + FDFLDPP E+L AL+QLY + A++ G +T +
Sbjct: 720 EIQRTNLGNVVLMLKSLGIHDL--VHFDFLDPPPQETLVIALEQLYALGALNHRGELTKL 777
Query: 420 GRTMA 424
GR MA
Sbjct: 778 GRRMA 782
>sp|Q9P774|PRP16_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp16 PE=3 SV=2
Length = 1173
Score = 425 bits (1092), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/421 (48%), Positives = 297/421 (70%), Gaps = 5/421 (1%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAAV 63
LP E ++ + N V++V+GETGSGK+TQL+Q L+ GY ++G+IG TQPRRVAA+
Sbjct: 492 LPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGYHRNGMIGCTQPRRVAAM 551
Query: 64 SVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
SVA+RV++E+GVRLG VGY+IRFED T T+IKY+TDGVLLRE L +L YSVII+
Sbjct: 552 SVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESLMQNNLEKYSVIIM 611
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYP 183
DEAHERSLNTDIL+GL+K++++ R +K+L+TSAT++ +K S FF P +PG+ YP
Sbjct: 612 DEAHERSLNTDILMGLLKKVLS-RRRDIKLLVTSATMNSQKFSDFFGGAPQFTIPGRTYP 670
Query: 184 VEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEG 243
V+I+ +K + Y+E+A++ + IH+ +P GD+L+FMTGQ+DIE + D++ L +
Sbjct: 671 VDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILVFMTGQEDIEATCEIIADRLNQLHDA 730
Query: 244 SCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQ 303
+ ILP++ +P ++Q ++F P R+ +V+TNIAETSLTV G+ YV+D GY K
Sbjct: 731 PRLS--ILPIYSQMPADLQAKIFDSAEPGVRKVVVATNIAETSLTVHGISYVVDTGYCKL 788
Query: 304 RQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQR 363
+ YN G+ +L V IS+ ANQR GRAGRT PG YRLY Y E + T+PEIQR
Sbjct: 789 KMYNSKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEMAYIREMFETTLPEIQR 848
Query: 364 SSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTM 423
++L+ +VL LKSL + +I+ FDF+D P +++L +L +L+ + A+D G +T++G+ M
Sbjct: 849 TNLSNTVLILKSLGVEEIS--DFDFMDRPPNDTLMASLYELWTLGALDNFGKLTTLGKKM 906
Query: 424 A 424
+
Sbjct: 907 S 907
>sp|Q54NJ4|DHX15_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15
OS=Dictyostelium discoideum GN=dhx15 PE=3 SV=1
Length = 727
Score = 414 bits (1064), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/424 (49%), Positives = 299/424 (70%), Gaps = 13/424 (3%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPRRVAA 62
LP+ + +E ++ +++N VV+++GETGSGK+TQ+ Q + G + G ++GVTQPRRVAA
Sbjct: 77 LPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGLIRPGKMVGVTQPRRVAA 136
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+SVA+RV++E+ LGEEVGY+IRFE+ +S RT +KYLTDG+LLRE +S+P L+ Y VII
Sbjct: 137 ISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDGMLLRESMSDPTLNKYDVII 196
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+L+TDIL GL+K ++ R LK+++ SATL+ K K+F N P + VPG+L+
Sbjct: 197 LDEAHERTLSTDILFGLIKDILK-RRKDLKLIVMSATLEAGKFQKYFENAPLIKVPGRLH 255
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVEI +++E YLESA++T IDIH E GD+L+F+TG+++IE +K++ + R E
Sbjct: 256 PVEIFYTEEAAKDYLESAVRTVIDIHTNEGTGDILVFLTGEEEIEDTCAKIQRETR---E 312
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNC--RRFIVSTNIAETSLTVDGVVYVIDCGY 300
LPL+ SLP Q ++F C R+ IVSTNIAETSLT+DG+V+V+D G+
Sbjct: 313 RGLPPMKTLPLYSSLPIYQQSKIFD----TCKERKCIVSTNIAETSLTIDGIVFVVDPGF 368
Query: 301 VKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPE 360
KQ+ YNP S + SL V ISK ANQR GRAGRTRPGKC+RLY + + + T PE
Sbjct: 369 SKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTRPGKCFRLYTEKAFKELMIQQTHPE 428
Query: 361 IQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIG 420
I RS+LA VL L L L ++++ FDF+DPP ++L AL+ L+ + A+D+ G +T IG
Sbjct: 429 ILRSNLASVVLQL--LKLGVVDLVHFDFMDPPVPDTLIRALEVLHYLGALDDEGQLTEIG 486
Query: 421 RTMA 424
M+
Sbjct: 487 SIMS 490
>sp|Q20875|DHX15_CAEEL Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
F56D2.6 OS=Caenorhabditis elegans GN=F56D2.6 PE=2 SV=1
Length = 739
Score = 414 bits (1064), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/442 (49%), Positives = 300/442 (67%), Gaps = 27/442 (6%)
Query: 2 ANLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQI--------LHRHGYTKSGIIG 53
+ LP+ +Y+E +E + N + ++GETGSGK+TQ+ Q ++ ++
Sbjct: 74 SQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQARLVA 133
Query: 54 VTQPRRVAAVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNP 113
TQPRRVAA+SVA RVA+E+ V LG+EVGY+IRFED SERT++KY TDG+LLRE +++P
Sbjct: 134 CTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAMNSP 193
Query: 114 DLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCP 173
L Y V+ILDEAHER+L TDIL+GL+K +V RA +K++I SATLD K ++F +CP
Sbjct: 194 LLDKYKVLILDEAHERTLATDILMGLIKEIVRNRAD-IKVVIMSATLDAGKFQRYFEDCP 252
Query: 174 TLNVPGKLYPVEILHSKERPTSYLESALKTAIDIH-VREPEGDVLIFMTGQDDIEKLVSK 232
L+VPG+ +PVEI + YLE+A++T I IH V E EGD+L+F+TGQ++IE+ +
Sbjct: 253 LLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIEEACKR 312
Query: 233 LEDKIRSL--DEG--SCMDAVILPLHGSLPPEMQVRVFSPPPPN------CRRFIVSTNI 282
++ +I++L D G SC +PL+ +LPP Q R+F P PPN R+ ++STNI
Sbjct: 313 IDREIQALGADAGALSC-----IPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTNI 367
Query: 283 AETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYR 342
AETSLT+DGVV+VID G+ KQ+ YNP + SL V ISK A QR GRAGRT+PGKC+R
Sbjct: 368 AETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCFR 427
Query: 343 LYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALK 402
LY T Y E D T PEI RS+L VL LK L D+ + FDF+DPP+ E+L AL+
Sbjct: 428 LYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDL--VHFDFMDPPAPETLMRALE 485
Query: 403 QLYLIDAIDENGSITSIGRTMA 424
L + AI+++G +T +G MA
Sbjct: 486 LLNYLQAINDDGELTELGSLMA 507
>sp|O42945|DHX15_SCHPO Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp43 PE=3 SV=1
Length = 735
Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/429 (49%), Positives = 295/429 (68%), Gaps = 17/429 (3%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQIL--HRHGYTKSGIIGVTQPRRVA 61
LP+ Q E ++ +N ++V +GETGSGK+TQ+ Q + + + I TQPRRVA
Sbjct: 75 LPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLTNTQIACTQPRRVA 134
Query: 62 AVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
A+SVA+RVA E+ V LGEEVGY IRFED + TL+KY+TDG+LLRE +++ LS YS I
Sbjct: 135 AMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLREAMTDHMLSRYSCI 194
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
ILDEAHER+L TDIL+GL+KRL R LKI++ SATLD +K K+F + P L VPG+
Sbjct: 195 ILDEAHERTLATDILMGLMKRLATRRPD-LKIIVMSATLDAKKFQKYFFDAPLLAVPGRT 253
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKL----EDKI 237
YPVEI +++E YLE+AL+T + IHV E GD+L+F+TG+++IE K+ +D +
Sbjct: 254 YPVEIYYTQEPERDYLEAALRTVLQIHVEEGPGDILVFLTGEEEIEDACRKITLEADDLV 313
Query: 238 RSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNC-----RRFIVSTNIAETSLTVDGV 292
R EG+ + PL+GSLPP Q R+F P P + R+ ++STNIAETSLT+DG+
Sbjct: 314 R---EGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKSGYGRKVVISTNIAETSLTIDGI 370
Query: 293 VYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDE 352
VYV+D G+ KQ+ YNP + SL V ISK A QR GRAGRTRPGKC+RLY + E
Sbjct: 371 VYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFRKE 430
Query: 353 FLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDE 412
++ T PEI RS+L+ +VL LK L + D+ + FD++DPP+ E++ AL++L ++ +D+
Sbjct: 431 LIEQTYPEILRSNLSSTVLELKKLGIDDL--VHFDYMDPPAPETMMRALEELNYLNCLDD 488
Query: 413 NGSITSIGR 421
NG +T +GR
Sbjct: 489 NGDLTPLGR 497
>sp|P53131|PRP43_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP43 PE=1 SV=1
Length = 767
Score = 411 bits (1056), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/426 (48%), Positives = 299/426 (70%), Gaps = 11/426 (2%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQ--ILHRHGYTKSGIIGVTQPRRVA 61
LP+ + ++ + N ++V +GETGSGK+TQ+ Q + + ++ + TQPRRVA
Sbjct: 93 LPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVA 152
Query: 62 AVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
A+SVA+RVA+E+ V+LGEEVGY+IRFE++TS +T++KY+TDG+LLRE + + DLS YS I
Sbjct: 153 AMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRYSCI 212
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
ILDEAHER+L TDIL+GL+K++V R LKI+I SATLD EK ++F++ P L VPG+
Sbjct: 213 ILDEAHERTLATDILMGLLKQVVK-RRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRT 271
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLE-DKIRSL 240
YPVE+ ++ E YL+SA++T + IH E GD+L+F+TG+D+IE V K+ + + +
Sbjct: 272 YPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLV 331
Query: 241 DEGSCMDAVILPLHGSLPPEMQVRVFSPPPPN-----CRRFIVSTNIAETSLTVDGVVYV 295
E C + PL+GSLPP Q R+F P P + R+ ++STNIAETSLT+DG+VYV
Sbjct: 332 REEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYV 391
Query: 296 IDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLD 355
+D G+ KQ+ YNP + SL V ISK A QR GRAGRTRPGKC+RLY + E ++
Sbjct: 392 VDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKELIE 451
Query: 356 VTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGS 415
+ PEI RS+L+ +VL LK L + D+ + FDF+DPP+ E++ AL++L + +D+ G+
Sbjct: 452 QSYPEILRSNLSSTVLELKKLGIDDL--VHFDFMDPPAPETMMRALEELNYLACLDDEGN 509
Query: 416 ITSIGR 421
+T +GR
Sbjct: 510 LTPLGR 515
>sp|O22899|DHX15_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At2g47250 PE=2 SV=1
Length = 729
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/436 (47%), Positives = 302/436 (69%), Gaps = 19/436 (4%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQ------ILHRHGYTKSGIIGVTQ 56
+LP+ ++ + T+ N ++++GETGSGK+TQ+ Q + + ++G TQ
Sbjct: 64 DLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKWLVGCTQ 123
Query: 57 PRRVAAVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLS 116
PRRVAA+SV+RRVA E+ V +GEEVGY+IRFED TS RT++KYLTDG+LLRE +++P L
Sbjct: 124 PRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAMADPLLE 183
Query: 117 PYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLN 176
Y VIILDEAHER+L TD+L GL+K ++ R LK+++ SATL+ EK ++FS P +
Sbjct: 184 RYKVIILDEAHERTLATDVLFGLLKEVLRNRPD-LKLVVMSATLEAEKFQEYFSGAPLMK 242
Query: 177 VPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDK 236
VPG+L+PVEI +++E YLE+A++T + IH+ EP GD+L+F+TG+++IE K+ +
Sbjct: 243 VPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKE 302
Query: 237 IRSLDEGSCMDAV-ILPLHGSLPPEMQVRVFSPPP-------PNCRRFIVSTNIAETSLT 288
+ +L G + V ++PL+ +LPP MQ ++F P P P R+ +VSTNIAETSLT
Sbjct: 303 VSNL--GDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAETSLT 360
Query: 289 VDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTV 348
+DG+VYVID G+ KQ+ YNP + SL V ISK A+QR GRAGRTRPGKC+RLY
Sbjct: 361 IDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKS 420
Query: 349 YHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLID 408
++++ T PEI RS+LA +VL LK L + D+ + FDF+DPP+ E+L AL+ L +
Sbjct: 421 FNNDLQPQTYPEILRSNLANTVLTLKKLGIDDL--VHFDFMDPPAPETLMRALEVLNYLG 478
Query: 409 AIDENGSITSIGRTMA 424
A+D+ G++T G M+
Sbjct: 479 ALDDEGNLTKTGEIMS 494
>sp|Q5RAZ4|DHX15_PONAB Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Pongo abelii GN=DHX15 PE=2 SV=2
Length = 795
Score = 407 bits (1046), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/432 (48%), Positives = 297/432 (68%), Gaps = 14/432 (3%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGI---IGVTQPRR 59
LP+ +Y++ + + ++ V++GETGSGK+TQ+ Q + + G + TQPRR
Sbjct: 136 QLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRR 195
Query: 60 VAAVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYS 119
VAA+SVA+RVA E+ V LG+EVGY+IRFED +S +T++KY+TDG+LLRE +++P L Y
Sbjct: 196 VAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYG 255
Query: 120 VIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPG 179
VIILDEAHER+L TDIL+G++K +V R S LK+++ SATLD K +F NCP L +PG
Sbjct: 256 VIILDEAHERTLATDILMGVLKEVVRQR-SDLKVIVMSATLDAGKFQIYFDNCPLLTIPG 314
Query: 180 KLYPVEILHSKERPTSYLESALKTAIDIHV-REPEGDVLIFMTGQDDIEKLVSKLEDKIR 238
+ +PVEI ++ E YLE+A++T I IH+ E EGD+L+F+TGQ++I++ +++ ++
Sbjct: 315 RTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVD 374
Query: 239 SLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPN------CRRFIVSTNIAETSLTVDGV 292
L D I+PL+ +LPP+ Q R+F PPPP R+ +VSTNIAETSLT+DGV
Sbjct: 375 DLGP-EVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGV 433
Query: 293 VYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDE 352
V+VID G+ KQ+ YNP + SL V ISK A QR GRAGRTRPGKC+RLY Y E
Sbjct: 434 VFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTE 493
Query: 353 FLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDE 412
D T PEI RS+L VL LK L + D+ + FDF+DPP+ E+L AL+ L + A+++
Sbjct: 494 MQDNTYPEILRSNLGSVVLQLKKLGIDDL--VHFDFMDPPAPETLMRALELLNYLAALND 551
Query: 413 NGSITSIGRTMA 424
+G +T +G MA
Sbjct: 552 DGDLTELGSMMA 563
>sp|O35286|DHX15_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Mus musculus GN=Dhx15 PE=2 SV=2
Length = 795
Score = 407 bits (1046), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/432 (48%), Positives = 297/432 (68%), Gaps = 14/432 (3%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGI---IGVTQPRR 59
LP+ +Y++ + + ++ V++GETGSGK+TQ+ Q + + G + TQPRR
Sbjct: 136 QLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRR 195
Query: 60 VAAVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYS 119
VAA+SVA+RVA E+ V LG+EVGY+IRFED +S +T++KY+TDG+LLRE +++P L Y
Sbjct: 196 VAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYG 255
Query: 120 VIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPG 179
VIILDEAHER+L TDIL+G++K +V R S LK+++ SATLD K +F NCP L +PG
Sbjct: 256 VIILDEAHERTLATDILMGVLKEVVRQR-SDLKVIVMSATLDAGKFQIYFDNCPLLTIPG 314
Query: 180 KLYPVEILHSKERPTSYLESALKTAIDIHV-REPEGDVLIFMTGQDDIEKLVSKLEDKIR 238
+ +PVEI ++ E YLE+A++T I IH+ E EGD+L+F+TGQ++I++ +++ ++
Sbjct: 315 RTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVD 374
Query: 239 SLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPN------CRRFIVSTNIAETSLTVDGV 292
L D I+PL+ +LPP+ Q R+F PPPP R+ +VSTNIAETSLT+DGV
Sbjct: 375 DLGP-EVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGV 433
Query: 293 VYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDE 352
V+VID G+ KQ+ YNP + SL V ISK A QR GRAGRTRPGKC+RLY Y E
Sbjct: 434 VFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTE 493
Query: 353 FLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDE 412
D T PEI RS+L VL LK L + D+ + FDF+DPP+ E+L AL+ L + A+++
Sbjct: 494 MQDNTYPEILRSNLGSVVLQLKKLGIDDL--VHFDFMDPPAPETLMRALELLNYLAALND 551
Query: 413 NGSITSIGRTMA 424
+G +T +G MA
Sbjct: 552 DGDLTELGSMMA 563
>sp|O43143|DHX15_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Homo sapiens GN=DHX15 PE=1 SV=2
Length = 795
Score = 407 bits (1046), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/432 (48%), Positives = 297/432 (68%), Gaps = 14/432 (3%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGI---IGVTQPRR 59
LP+ +Y++ + + ++ V++GETGSGK+TQ+ Q + + G + TQPRR
Sbjct: 136 QLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRR 195
Query: 60 VAAVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYS 119
VAA+SVA+RVA E+ V LG+EVGY+IRFED +S +T++KY+TDG+LLRE +++P L Y
Sbjct: 196 VAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYG 255
Query: 120 VIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPG 179
VIILDEAHER+L TDIL+G++K +V R S LK+++ SATLD K +F NCP L +PG
Sbjct: 256 VIILDEAHERTLATDILMGVLKEVVRQR-SDLKVIVMSATLDAGKFQIYFDNCPLLTIPG 314
Query: 180 KLYPVEILHSKERPTSYLESALKTAIDIHV-REPEGDVLIFMTGQDDIEKLVSKLEDKIR 238
+ +PVEI ++ E YLE+A++T I IH+ E EGD+L+F+TGQ++I++ +++ ++
Sbjct: 315 RTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVD 374
Query: 239 SLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPN------CRRFIVSTNIAETSLTVDGV 292
L D I+PL+ +LPP+ Q R+F PPPP R+ +VSTNIAETSLT+DGV
Sbjct: 375 DLGP-EVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGV 433
Query: 293 VYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDE 352
V+VID G+ KQ+ YNP + SL V ISK A QR GRAGRTRPGKC+RLY Y E
Sbjct: 434 VFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTE 493
Query: 353 FLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDE 412
D T PEI RS+L VL LK L + D+ + FDF+DPP+ E+L AL+ L + A+++
Sbjct: 494 MQDNTYPEILRSNLGSVVLQLKKLGIDDL--VHFDFMDPPAPETLMRALELLNYLAALND 551
Query: 413 NGSITSIGRTMA 424
+G +T +G MA
Sbjct: 552 DGDLTELGSMMA 563
>sp|Q8IX18|DHX40_HUMAN Probable ATP-dependent RNA helicase DHX40 OS=Homo sapiens GN=DHX40
PE=1 SV=2
Length = 779
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/445 (46%), Positives = 302/445 (67%), Gaps = 21/445 (4%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAAV 63
PI + + I++ V N ++V G TGSGK+TQL + L+ G+++ G+IGVTQPR+VAA+
Sbjct: 53 FPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAI 112
Query: 64 SVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
SVA+RVA+E+ LG +VGY +RF+D +S+ T IKY+TDG LL+ IL +P+L+ +SVIIL
Sbjct: 113 SVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIIL 172
Query: 124 DEAHERSLNTDILLGLVKRLVNL----RASKLKILITSATLDGEKVSKFFSNCPTLNVPG 179
DEAHER+L TDIL GL+K+L R LK+++ SAT++ K+S FF NCP ++PG
Sbjct: 173 DEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPG 232
Query: 180 KLYPVE-----ILHSKERP-TSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKL 233
+LYPV ++ ++R T+Y+++ +K +DIH+ E GD+L+F+TGQ +IEK L
Sbjct: 233 RLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELL 292
Query: 234 EDKIRSLD-----EGSCMDA-VILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSL 287
S+D + + +D +ILP +GS+ + Q R+F PPPP R+ ++STNI+ TSL
Sbjct: 293 FQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSL 352
Query: 288 TVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPST 347
T+DG+ YV+D G+VKQ +NP G+ L+VV ISK +A QR GRAGRT GKC+R+Y
Sbjct: 353 TIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKD 412
Query: 348 VYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLI 407
++ D +PEI+R+SL VL LK L + D V++F +LDPP+ + +ALKQLY
Sbjct: 413 FWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHD--VIRFPYLDPPNERLILEALKQLYQC 470
Query: 408 DAIDENGSITSIGRTMAGTSFFALP 432
DAID +G +T +G +M F LP
Sbjct: 471 DAIDRSGHVTRLGLSMVE---FPLP 492
>sp|Q5R864|DHX40_PONAB Probable ATP-dependent RNA helicase DHX40 OS=Pongo abelii GN=DHX40
PE=2 SV=1
Length = 779
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/445 (46%), Positives = 302/445 (67%), Gaps = 21/445 (4%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAAV 63
PI + + I++ V N ++V G TGSGK+TQL + L+ G+++ G+IGVTQPR+VAA+
Sbjct: 53 FPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAI 112
Query: 64 SVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
SVA+RVA+E+ LG +VGY +RF+D +S+ T IKY+TDG LL+ IL +P+L+ +SVIIL
Sbjct: 113 SVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIIL 172
Query: 124 DEAHERSLNTDILLGLVKRLVNL----RASKLKILITSATLDGEKVSKFFSNCPTLNVPG 179
DEAHER+L TDIL GL+K+L R LK+++ SAT++ K+S FF NCP ++PG
Sbjct: 173 DEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPG 232
Query: 180 KLYPVE-----ILHSKERP-TSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKL 233
+LYPV ++ ++R T+Y+++ +K +DIH+ E GD+L+F+TGQ +IEK L
Sbjct: 233 RLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELL 292
Query: 234 EDKIRSLD-----EGSCMDA-VILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSL 287
S+D + + +D +ILP +GS+ + Q R+F PPPP R+ ++STNI+ TSL
Sbjct: 293 FQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSL 352
Query: 288 TVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPST 347
T+DG+ YV+D G+VKQ +NP G+ L+VV ISK +A QR GRAGRT GKC+R+Y
Sbjct: 353 TIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKD 412
Query: 348 VYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLI 407
++ D +PEI+R+SL VL LK L + D V++F +LDPP+ + +ALKQLY
Sbjct: 413 FWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHD--VIRFPYLDPPNERLILEALKQLYQC 470
Query: 408 DAIDENGSITSIGRTMAGTSFFALP 432
DAID +G +T +G +M F LP
Sbjct: 471 DAIDRSGHVTRLGLSMVE---FPLP 492
>sp|Q6PE54|DHX40_MOUSE Probable ATP-dependent RNA helicase DHX40 OS=Mus musculus GN=Dhx40
PE=2 SV=1
Length = 779
Score = 404 bits (1039), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/446 (46%), Positives = 301/446 (67%), Gaps = 21/446 (4%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAA 62
PI + + +++ V N ++V G TGSGK+TQL + L+ G+++ G+IGVTQPR+VAA
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+SVA+RVA+E+ LG +VGY +RF+D +S+ T IKY+TDG LL+ IL +P+LS +SVII
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLSKFSVII 171
Query: 123 LDEAHERSLNTDILLGLVKRLVN----LRASKLKILITSATLDGEKVSKFFSNCPTLNVP 178
LDEAHER+L TDIL GL+K+L R LK+++ SAT++ K+S FF NCP ++P
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 179 GKLYPVE-----ILHSKERP-TSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSK 232
G+LYPV ++ ++R T+Y+++ +K +DIH+ E GD+L+F+TGQ +IEK
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 291
Query: 233 LEDKIRSLD-----EGSCMDA-VILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETS 286
L S+D + + +D +ILP +GS+ + Q R+F PPPP R+ ++STNI+ TS
Sbjct: 292 LFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATS 351
Query: 287 LTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPS 346
LT+DG+ YV+D G+VKQ +NP G+ L+VV ISK +A QR GRAGRT GKC+R+Y
Sbjct: 352 LTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSK 411
Query: 347 TVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYL 406
+ D +PEI+R+SL VL LK L + D V++F +LDPP+ + +ALKQLY
Sbjct: 412 EFWSQCMPDHVIPEIKRTSLTSVVLTLKCLAIHD--VIRFPYLDPPNERLILEALKQLYQ 469
Query: 407 IDAIDENGSITSIGRTMAGTSFFALP 432
DAID +G +T +G +M F LP
Sbjct: 470 CDAIDRSGHVTRLGLSMVE---FPLP 492
>sp|Q5XI69|DHX40_RAT Probable ATP-dependent RNA helicase DHX40 OS=Rattus norvegicus
GN=Dhx40 PE=2 SV=1
Length = 779
Score = 404 bits (1037), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/445 (46%), Positives = 302/445 (67%), Gaps = 21/445 (4%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAAV 63
PI + + +++ V N ++V G TGSGK+TQL + L+ G+++ G+IGVTQPR+VAA+
Sbjct: 53 FPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAI 112
Query: 64 SVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
SVA+RVA+E+ LG +VGY +RF+D +S+ T IKY+TDG LL+ IL +P+L+ +SVIIL
Sbjct: 113 SVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLNKFSVIIL 172
Query: 124 DEAHERSLNTDILLGLVKRLVN----LRASKLKILITSATLDGEKVSKFFSNCPTLNVPG 179
DEAHER+L TDIL GL+K+L R LK+++ SAT++ K+S FF NCP ++PG
Sbjct: 173 DEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPG 232
Query: 180 KLYPVE-----ILHSKERP-TSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKL 233
+LYPV ++ ++R T+Y+++ +K +DIH+ E GD+L+F+TGQ +IEK L
Sbjct: 233 RLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELL 292
Query: 234 EDKIRSLD-----EGSCMDA-VILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSL 287
S+D + + +D +ILP +GS+ + Q R+F PPPP R+ ++STNI+ TSL
Sbjct: 293 FQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSL 352
Query: 288 TVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPST 347
T+DG+ YV+D G+VKQ +NP G+ L+VV ISK +A QR GRAGRT GKC+R+Y
Sbjct: 353 TIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKD 412
Query: 348 VYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLI 407
++ D +PEI+R+SL VL LK L + D V++F +LDPP+ + +ALKQLY
Sbjct: 413 FWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHD--VIRFPYLDPPNERLILEALKQLYQC 470
Query: 408 DAIDENGSITSIGRTMAGTSFFALP 432
DAID +G +T +G +M F LP
Sbjct: 471 DAIDRSGHVTRLGLSMVE---FPLP 492
>sp|P20095|PRP2_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
PRP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PRP2 PE=1 SV=1
Length = 876
Score = 403 bits (1036), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/426 (47%), Positives = 302/426 (70%), Gaps = 10/426 (2%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGI--IGVTQPRRVA 61
LP+ QY++ +++ +++N V++++GETGSGK+TQL Q L G+T G I +TQPRRVA
Sbjct: 223 LPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQGKLQIAITQPRRVA 282
Query: 62 AVSVARRVAQELGVRLGEEVGYAIRFEDRTS-ERTLIKYLTDGVLLREILSNPDLSPYSV 120
A SVA RVA E+ V LG+EVGY IRFED+T+ +T++KY+TDG+LLRE L++ LS YS
Sbjct: 283 ATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLTDSKLSKYSC 342
Query: 121 IILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGK 180
I++DEAHER+L TDIL+GL+K ++ R + LK+LI+SAT++ +K S+FF NCP NVPG+
Sbjct: 343 IMIDEAHERTLATDILIGLLKDILPQRPT-LKLLISSATMNAKKFSEFFDNCPIFNVPGR 401
Query: 181 LYPVEILHSKERPTSYLESALKTAIDIHVREP-EGDVLIFMTGQDDIEKLVSKLEDKIRS 239
YPV+I ++ + +Y+ +A+ T IH + GD+L+F+TGQ++IE+ +KLE+ +
Sbjct: 402 RYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDILVFLTGQEEIERTKTKLEEIMSK 461
Query: 240 LDEGS-CMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDC 298
L GS +I P++ +LP E Q+++F P P NCR+ +++TNIAETSLT+DG+ YVID
Sbjct: 462 L--GSRTKQMIITPIYANLPQEQQLKIFQPTPENCRKVVLATNIAETSLTIDGIRYVIDP 519
Query: 299 GYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTV 358
G+VK+ Y PS+GM L V S+ +QR GRAGR PGKC+R++ Y E +
Sbjct: 520 GFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKCFRIFTKWSYLHELELMPK 579
Query: 359 PEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITS 418
PEI R++L+ +VL L SL ++D+ +KF +D PS +L +L+ LY++ A++ G+IT
Sbjct: 580 PEITRTNLSNTVLLLLSLGVTDL--IKFPLMDKPSIPTLRKSLENLYILGALNSKGTITR 637
Query: 419 IGRTMA 424
+G+ M
Sbjct: 638 LGKMMC 643
>sp|Q03319|PRH1_SCHPO Probable ATP-dependent RNA helicase prh1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=prh1 PE=3 SV=2
Length = 719
Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/422 (46%), Positives = 286/422 (67%), Gaps = 5/422 (1%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAA 62
NLPI + +T+ + ++ N V+VV+GETGSGKSTQ+ Q L+ Y + G + +TQPRRVAA
Sbjct: 95 NLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPYAQEGCVAITQPRRVAA 154
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
V++A+RVA E G RLGE+VGY+IRF+D TS++T IKYLTDG+LLRE++++P LS Y +I
Sbjct: 155 VNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGMLLRELINDPILSQYHTLI 214
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+L TD+LLG VK+++ R + L+++I SATL+ E+ S+FF + G+ Y
Sbjct: 215 LDEAHERTLMTDMLLGFVKKIIKKRPA-LRVIIMSATLNAERFSEFFDGAEICYISGRQY 273
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PV+I ++ YL++ L+T +H + P GD+L+F+TGQD+IE L + ++ + L
Sbjct: 274 PVQIHYTYTPEPDYLDACLRTIFQLHTKLPPGDILVFLTGQDEIEALEALIKSYSKQL-P 332
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ PL SLP E Q++VF P N R+ ++STNIAETS+T+ G+ YVID G K
Sbjct: 333 SNLPQIQACPLFASLPQEQQLQVFLPALANHRKVVLSTNIAETSVTISGIRYVIDTGLAK 392
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
+Q+N G+ SL V IS+ A QR GRAGR G+CYR+Y + D+ T+PEI+
Sbjct: 393 IKQFNSKLGLESLTVQPISQSAAMQRSGRAGREAAGQCYRIYTEADF-DKLPKETIPEIK 451
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R L+ +VL LK+ +D V+ F ++DPPS E L AL+ LY I A+D+NG I +G
Sbjct: 452 RIDLSQAVLTLKARGQND--VINFHYMDPPSKEGLLRALEHLYSIGALDDNGHINDLGYQ 509
Query: 423 MA 424
M+
Sbjct: 510 MS 511
>sp|P15938|PRP16_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP16 PE=1 SV=2
Length = 1071
Score = 372 bits (954), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/434 (47%), Positives = 290/434 (66%), Gaps = 15/434 (3%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYT--KSGIIGVTQPRRVA 61
LP+ + ++ + +N VVV+IGETGSGK+TQL+Q L+ GY + I VTQPRRVA
Sbjct: 350 LPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIVVTQPRRVA 409
Query: 62 AVSVARRVAQELGVRLGEEVGYAIRFEDRT-SERTLIKYLTDGVLLREILSNPDLSPYSV 120
A+SVA+RVA E+ V LG+EVGY+IRFED T SE T +K++TDG+LLRE L + L YS
Sbjct: 410 AISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDDTLDKYSC 469
Query: 121 IILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGK 180
+I+DEAHERSLNTDILLG K L+ R LK++ITSAT++ +K S FF N P +PG+
Sbjct: 470 VIIDEAHERSLNTDILLGFFKILL-ARRRDLKLIITSATMNAKKFSAFFGNAPQFTIPGR 528
Query: 181 LYPVEILHSKERPTSYLESALKTAIDIHVRE--PEGDVLIFMTGQDDIEKLVSKLEDK-- 236
+PV+ +++ Y+E+A+ A+ IH+ GD+LIFMTGQ+DIE L++K
Sbjct: 529 TFPVQTIYTSNPVQDYVEAAVSQAVKIHLANDCSSGDILIFMTGQEDIETTFDTLQEKFL 588
Query: 237 -IRSLDEGSCM-----DAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVD 290
+ S G+ D ILP++ +LP ++Q ++F R+ I++TNIAETSLT+
Sbjct: 589 QVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGTKRKIIIATNIAETSLTIK 648
Query: 291 GVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYH 350
G+ YVIDCGY K + YNP G+ SL + ISK A+QR GRAGRT PG YRLY +
Sbjct: 649 GIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTAYRLYTEDTFK 708
Query: 351 DEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI 410
++ T+PEIQR++L+ ++L LKSLD++D + KF F+D P ++ +L +L+ I AI
Sbjct: 709 EDMYLQTIPEIQRTNLSNTLLLLKSLDVTD-ELSKFPFIDKPPLQTFLSSLYELWFIGAI 767
Query: 411 DENGSITSIGRTMA 424
D +G +T +G MA
Sbjct: 768 DTSGQLTPLGLQMA 781
>sp|Q9H5Z1|DHX35_HUMAN Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens GN=DHX35
PE=1 SV=2
Length = 703
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/428 (45%), Positives = 284/428 (66%), Gaps = 17/428 (3%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPRRVA 61
LP+ + I+ +E VV++GETG GKSTQ+ Q L G+T G ++GVTQPRRVA
Sbjct: 53 KLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVA 112
Query: 62 AVSVARRVAQELGVRLGEEVGYAIRFEDRTSE-RTLIKYLTDGVLLREILSNPDLSPYSV 120
AV+VA RVA+E G LG EVGY IRF+D T + T IK+LTDG+L+RE++ +P L+ YSV
Sbjct: 113 AVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSV 172
Query: 121 IILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSN--------- 171
I+LDEAHER+L TDI +GL+K++ R L++++ SATLD +K FF+
Sbjct: 173 IMLDEAHERTLYTDIAIGLLKKIQKKRGD-LRLIVASATLDADKFRDFFNQNETSDPARD 231
Query: 172 -CPTLNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLV 230
C L V G+ +PV+I + + Y++S ++T + IH E +GDVL F+TGQ+++E +V
Sbjct: 232 TCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVV 291
Query: 231 SKLEDKIRSLDE-GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTV 289
S L ++ R+L G +LP++ LP Q++VF + R+ IV+TN+AETS+T+
Sbjct: 292 SMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITI 351
Query: 290 DGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVY 349
G+VYVIDCG+VK R YNP + + L VV +S+ ANQR GR GR+R GKCYRLY +
Sbjct: 352 SGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAF 411
Query: 350 HDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDA 409
D+ TVPE+QRS+LA +L LK+L + NVL+F F+ PP ++S+ AL+ LY +
Sbjct: 412 -DKLPQSTVPEMQRSNLAPVILQLKALGID--NVLRFHFMSPPPAQSMVQALELLYALGG 468
Query: 410 IDENGSIT 417
+D++ +T
Sbjct: 469 LDKDCRLT 476
>sp|Q5RBD4|DHX35_PONAB Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii GN=DHX35
PE=2 SV=1
Length = 720
Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/428 (45%), Positives = 284/428 (66%), Gaps = 17/428 (3%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPRRVA 61
LP+ + I+ +E VV++GETG GKSTQ+ Q L G+T G ++GVTQPRRVA
Sbjct: 53 KLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVA 112
Query: 62 AVSVARRVAQELGVRLGEEVGYAIRFEDRTSE-RTLIKYLTDGVLLREILSNPDLSPYSV 120
AV+VA RVA+E G LG EVGY IRF+D T + T IK+LTDG+L+RE++ +P L+ YSV
Sbjct: 113 AVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSV 172
Query: 121 IILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSN--------- 171
I+LDEAHER+L TDI +GL+K++ R L++++ SATLD +K FF+
Sbjct: 173 IMLDEAHERTLYTDIAIGLLKKIQKKRGD-LRLIVASATLDADKFRDFFNQNETSDPARD 231
Query: 172 -CPTLNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLV 230
C L V G+ +PV+I + + Y++S ++T + IH E +GD+L F+TGQ+++E +V
Sbjct: 232 TCVILTVGGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDILAFLTGQEEVETVV 291
Query: 231 SKLEDKIRSLDE-GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTV 289
S L ++ R+L G +LP++ LP Q++VF + R+ IV+TN+AETS+T+
Sbjct: 292 SMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITI 351
Query: 290 DGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVY 349
G+VYVIDCG+VK R YNP + + L VV +S+ ANQR GR GR+R GKCYRLY +
Sbjct: 352 SGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAF 411
Query: 350 HDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDA 409
D+ TVPE+QRS+LA +L LK+L + NVL+F F+ PP ++S+ AL+ LY +
Sbjct: 412 -DKLPQSTVPEMQRSNLAPVILQLKALGID--NVLRFHFMSPPPAQSMVQALELLYALGG 468
Query: 410 IDENGSIT 417
+D++ +T
Sbjct: 469 LDKDCRLT 476
>sp|Q9BKQ8|DHX35_CAEEL Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis
elegans GN=Y67D2.6 PE=3 SV=1
Length = 732
Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/441 (44%), Positives = 286/441 (64%), Gaps = 21/441 (4%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPRRVAA 62
LPI + I+ E+ ++++GETG GKSTQ+ Q L G+ G I +TQPRRVA
Sbjct: 77 LPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQIVITQPRRVAV 136
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
V++A RVA+E LG +VGY +RF+D + + T +K++TDG+LLREIL++P LS YS+I+
Sbjct: 137 VTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILADPLLSKYSIIM 196
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLN------ 176
+DEAHERS NTDILLGL+++++ +R + L+I+++SATLD E FF T N
Sbjct: 197 IDEAHERSCNTDILLGLLRKIIQIR-NDLRIIVSSATLDAELFKDFFEMNETGNSDKDTA 255
Query: 177 ----VPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSK 232
V G+ +PV + H+K Y +SA+ T I+IH E GD+L+F+TGQD++E + K
Sbjct: 256 GIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKHENPGDILVFLTGQDEVEDVCEK 315
Query: 233 LEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGV 292
L + +L +C ++P +G+LP Q++ F P R+ +V+TNIAE S+T+ G+
Sbjct: 316 LRELAGNLK--NCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIAEASITIPGI 373
Query: 293 VYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDE 352
YVID GYVK R + ++G+ +L V +SK A QR GRAGR RPGKCYRLYP + + +
Sbjct: 374 CYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRLYPESEF-ER 432
Query: 353 FLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDE 412
F + TVPEIQR +A ++L LK+L + NV +F +L PP S ++ + L+ LY + AIDE
Sbjct: 433 FAEGTVPEIQRCQMASTILQLKALGVQ--NVHRFHYLSPPPSWAMINGLELLYALGAIDE 490
Query: 413 NGSITS-IGRTMAGTSFFALP 432
+TS +G MA F LP
Sbjct: 491 TSQLTSPLGLQMAE---FPLP 508
>sp|Q80VY9|DHX33_MOUSE Putative ATP-dependent RNA helicase DHX33 OS=Mus musculus GN=Dhx33
PE=1 SV=1
Length = 698
Score = 366 bits (939), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/431 (45%), Positives = 281/431 (65%), Gaps = 12/431 (2%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAA 62
+LPI + ++ + V+IGETGSGK+TQ+ Q L+ G ++ GII VTQPRRVAA
Sbjct: 64 SLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVTQPRRVAA 123
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+S+A RV+ E LG+ VGY +RFED TSE T IK+LTDG+LLRE +S+ L YS +I
Sbjct: 124 ISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGMLLREAISDSLLRKYSCVI 183
Query: 123 LDEAHERSLNTDILLGLVK----RLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVP 178
LDEAHER+++TD+L G+VK R L LK+++ SAT+D + S++F+ P L +
Sbjct: 184 LDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNRAPVLYLE 243
Query: 179 GKLYPVEILHSKERPTSYLESALKTAIDIHVREPEG-DVLIFMTGQDDIEKLVSKLEDKI 237
G+ +P++I ++K+ YL +AL + IH P D+L+F+TGQ++IE + D
Sbjct: 244 GRQHPIQIFYTKQPQQDYLHAALVSVFQIHQEAPASQDILVFLTGQEEIEAMSKTCRDIA 303
Query: 238 RSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVID 297
R L +G C ++LPL+ SLP Q+RVF P R+ I+STNIAETS+T+ G+ YV+D
Sbjct: 304 RHLPDG-CPSMLVLPLYASLPYSQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVD 362
Query: 298 CGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVT 357
G VK ++YNP SG+ L V ++SK QA QR GRAGR G CYRLY + ++F +T
Sbjct: 363 TGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEF-EKFEKMT 421
Query: 358 VPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI---DENG 414
VPEIQR +LA +L L ++ + NVL FDF+ PS + +E A+ QL L+ A+ D+
Sbjct: 422 VPEIQRCNLASVILQLLAMKVP--NVLTFDFMSKPSPDHIEAAIAQLDLLGALEHKDDQL 479
Query: 415 SITSIGRTMAG 425
++T IGR MA
Sbjct: 480 TLTPIGRKMAA 490
>sp|Q9H6R0|DHX33_HUMAN Putative ATP-dependent RNA helicase DHX33 OS=Homo sapiens GN=DHX33
PE=1 SV=2
Length = 707
Score = 360 bits (925), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 193/431 (44%), Positives = 281/431 (65%), Gaps = 12/431 (2%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAA 62
+LPI Q ++ + V+IGETGSGK+TQ+ Q L+ G ++ GII VTQPRRVAA
Sbjct: 73 SLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVTQPRRVAA 132
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+S+A RV+ E LG+ VGY +RF+D TSE T IK+LTDG+LLRE +S+ L YS +I
Sbjct: 133 ISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLRKYSCVI 192
Query: 123 LDEAHERSLNTDILLGLVK----RLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVP 178
LDEAHER+++TD+L G+VK R L LK+++ SAT+D + S++F+ P L +
Sbjct: 193 LDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPVLYLE 252
Query: 179 GKLYPVEILHSKERPTSYLESALKTAIDIHVREPEG-DVLIFMTGQDDIEKLVSKLEDKI 237
G+ +P+++ ++K+ YL +AL + IH P D+L+F+TGQ++IE + D
Sbjct: 253 GRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMSKTCRDIA 312
Query: 238 RSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVID 297
+ L +G C ++LPL+ SLP Q+RVF P R+ I+STNIAETS+T+ G+ YV+D
Sbjct: 313 KHLPDG-CPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVD 371
Query: 298 CGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVT 357
G VK ++YNP SG+ L V ++SK QA QR GRAGR G CYRLY + ++F +T
Sbjct: 372 TGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEF-EKFDKMT 430
Query: 358 VPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI---DENG 414
VPEIQR +LA +L L ++ + NVL FDF+ PS + ++ A+ QL L+ A+ D+
Sbjct: 431 VPEIQRCNLASVMLQLLAMKVP--NVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDDQL 488
Query: 415 SITSIGRTMAG 425
++T +GR MA
Sbjct: 489 TLTPMGRKMAA 499
>sp|Q9HE06|YK99_SCHPO Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
C20H4.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPAC20H4.09 PE=3 SV=1
Length = 647
Score = 339 bits (870), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 186/421 (44%), Positives = 276/421 (65%), Gaps = 16/421 (3%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGY-TKSGIIGVTQPRRVAA 62
LPI +Y ++ VEQN + +V+G TG GK+TQ+ Q L+ G+ +++GIIG TQPRR+ A
Sbjct: 25 LPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCTQPRRLVA 84
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
SV+ RV+ EL G GY+I+F+ SE+T IKY+TDG+LL EI +P L YS++I
Sbjct: 85 KSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDPLLERYSIVI 144
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSN---CPTLNVPG 179
LDE HER+L+TD+LLG++KR++ R + +++++SA++D K+S+FF C T+++ G
Sbjct: 145 LDEVHERTLSTDLLLGVLKRILEKR-NDFRLVLSSASVDANKLSQFFGQDKVC-TMSIEG 202
Query: 180 KLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRS 239
KL+PVE L ++ +Y++SA++T I+I+ P GD+L+F++G+ +IE + K+ED +
Sbjct: 203 KLFPVETLFLQKPTENYVDSAIETVININSTYPPGDILVFLSGRKEIEYCIKKIEDSLIH 262
Query: 240 LDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCG 299
E C V LPLH L + Q+RVF+ + R+ I STNIAETS+T+DG+VYV+D G
Sbjct: 263 ASE-DCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYVVDSG 321
Query: 300 YVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVY---HDEFLDV 356
+ KQR YNP + L V ISK A QR GRAGRT GK +RLY Y +EF
Sbjct: 322 FNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTEKAYSLMKEEF--- 378
Query: 357 TVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSI 416
+I ++ VL+LK L L N+L+F F P + L AL+ LYL+ +DE+G++
Sbjct: 379 -EADILNCDMSPLVLFLKGLGLK--NILQFPFFVRPPTVHLMAALEDLYLLGVLDESGNL 435
Query: 417 T 417
T
Sbjct: 436 T 436
>sp|P36009|DHR2_YEAST Probable ATP-dependent RNA helicase DHR2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DHR2 PE=1
SV=1
Length = 735
Score = 327 bits (837), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 182/424 (42%), Positives = 267/424 (62%), Gaps = 6/424 (1%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGY--TKSGIIGVTQPRRVA 61
LP+ Q++ I+ +E NPV V+IGETGSGKSTQ+ Q + Y K G I VTQPRRVA
Sbjct: 81 LPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEKLYDTKKHGSIAVTQPRRVA 140
Query: 62 AVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
A+++A RVAQE G +LGE+VGY++RF++ T+ RT +KYLTDG+LLRE++ N DL YSVI
Sbjct: 141 AINLATRVAQEHGCKLGEQVGYSVRFDNTTTTRTRLKYLTDGMLLRELMMNSDLREYSVI 200
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
++DEAHER++ TD++LG +K L+ L+I++ SATL EK S+FF+N P L V G+
Sbjct: 201 VIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSEFFNNAPILFVEGRK 260
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSL- 240
+ V+ + K +++ ++ I I+ E GD+L F+ GQ++I+K V+ +E + +
Sbjct: 261 FDVKQYYLKAPTDDIVDAVIRCCIQINQGEELGDILCFLPGQEEIDKAVTIMEKIAKYVS 320
Query: 241 DEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGY 300
DE V PL+ +LP Q VF+P R+ + STNIAETS+T+ GV +V+D G
Sbjct: 321 DEAPVPLIVPYPLYAALPAVQQSLVFAPIKGFKRKVVFSTNIAETSVTISGVKFVVDSGL 380
Query: 301 VKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPE 360
K + + G+ +L V IS+ A QR GRAGR GK +RLY + Y + + PE
Sbjct: 381 RKVKVWRHQLGLATLLTVPISQASAMQRSGRAGRESEGKSFRLYCESDYV-KLPKQSEPE 439
Query: 361 IQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIG 420
I RS + VL LK + D+ L + + + P E++ L++LY + A+D G IT G
Sbjct: 440 IARSDVTSPVLMLKRYGVDDL--LNWTWFENPGKEAIVMGLQELYELGALDTRGKITKRG 497
Query: 421 RTMA 424
+ MA
Sbjct: 498 QQMA 501
>sp|Q04217|DHR1_YEAST Probable ATP-dependent RNA helicase DHR1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ECM16 PE=1
SV=1
Length = 1267
Score = 325 bits (832), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 199/519 (38%), Positives = 277/519 (53%), Gaps = 104/519 (20%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKS------GIIGVTQP 57
LP+ E I+E + N VV++ GETGSGK+TQ+ Q L+ G+ G++G+TQP
Sbjct: 391 LPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGAEDSPDYPGMVGITQP 450
Query: 58 RRVAAVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSP 117
RRVAAVS+A RVA ELG G +VGY IRF+ E T +K++TDGVLLRE++ + L+
Sbjct: 451 RRVAAVSMAERVANELGDH-GHKVGYQIRFDSTAKEDTKVKFMTDGVLLREMMHDFKLTK 509
Query: 118 YSVIILDEAHERSLNTDILLGLVKRLVNLRAS----------KLKILITSATLDGEKVSK 167
YS II+DEAHER++NTDIL+G++ R V LRA KLK++I SATL +VS
Sbjct: 510 YSSIIIDEAHERNINTDILIGMLSRCVRLRAKLHKENPIEHKKLKLIIMSATL---RVSD 566
Query: 168 FFSNC-------PTLNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFM 220
F N P L V + +PV I ++ +Y + A + IH + P G +L+F+
Sbjct: 567 FSENKTLFPIAPPVLQVDARQFPVSIHFNRRTAFNYTDEAFRKTCKIHQKLPPGAILVFL 626
Query: 221 TGQD-----------------------DIEKLVSKL----------------------ED 235
TGQ D+E VSK+ +D
Sbjct: 627 TGQQEITHMVKRLRKEFPFKKNSKYNKDLETPVSKMGINSKTTDLEAEDIDFSVQVIDQD 686
Query: 236 KIRSL-----DEGSCMDAV-------------------------ILPLHGSLPPEMQVRV 265
K +S DEG+ + +LPL+ LP + Q+RV
Sbjct: 687 KFKSAIRYEEDEGNSGNGEDEEDEEEEGFEEVLTEGQTANDPLYVLPLYSLLPTKEQMRV 746
Query: 266 FSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQA 325
F PP R IV+TN+AETSLT+ GV YV+D G K+R+YN S+G+ S +V +SK A
Sbjct: 747 FQKPPQGSRLCIVATNVAETSLTIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSKASA 806
Query: 326 NQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLK 385
NQR GRAGRT PG CYRLY S V+ +F + PEI R + VL +KS+ + N++
Sbjct: 807 NQRSGRAGRTGPGHCYRLYSSAVFEHDFEQFSKPEILRMPVESIVLQMKSMAIH--NIIN 864
Query: 386 FDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
F F PP +L A++ L + A+D IT G+ M+
Sbjct: 865 FPFPTPPDRVALSKAIQLLQYLGALDNKEMITEDGKKMS 903
>sp|O17438|DHX15_STRPU Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
(Fragment) OS=Strongylocentrotus purpuratus GN=PRP1 PE=2
SV=1
Length = 455
Score = 315 bits (806), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 166/335 (49%), Positives = 228/335 (68%), Gaps = 11/335 (3%)
Query: 97 IKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILIT 156
IKY+TDG+LLRE +++P L Y VI+LDEAHER++ TDIL+GL+K + R S LK+++
Sbjct: 1 IKYMTDGMLLREGMTDPLLERYGVILLDEAHERTVATDILMGLLKEVEKQR-SDLKLVVM 59
Query: 157 SATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERPTSYLESALKTAIDIHV-REPEGD 215
SATLD K +F N P + VPG+ +PVEI ++ E YLE+A++T + IH+ E EGD
Sbjct: 60 SATLDAGKFQHYFDNAPLMTVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGD 119
Query: 216 VLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPN--- 272
VL+F+TGQ++IE+ +++ ++ +L D +PL+ +LPP MQ R+F PPN
Sbjct: 120 VLLFLTGQEEIEEACKRIKREVDNLGP-EVGDLKTIPLYSTLPPAMQQRIFEHAPPNKAN 178
Query: 273 ---CRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRV 329
R+ +VSTNIAETSLT+DGVV+VID G+ KQ+ YNP + SL V ISK A QRV
Sbjct: 179 GAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRV 238
Query: 330 GRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFL 389
GRAGRTRPGKC+RLY Y E D T PEI RS+L VL LK L + D+ + FDF+
Sbjct: 239 GRAGRTRPGKCFRLYTEKAYDSEMQDNTYPEILRSNLGTVVLQLKKLGIDDL--VHFDFM 296
Query: 390 DPPSSESLEDALKQLYLIDAIDENGSITSIGRTMA 424
DPP+ E+L AL+ L + A+D++G +T +G MA
Sbjct: 297 DPPAPETLMRALELLNYLGALDDSGDLTRLGSMMA 331
>sp|Q9HDY4|YK16_SCHPO Putative ATP-dependent RNA helicase PB1A10.06c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAPB1A10.06c PE=3 SV=1
Length = 1183
Score = 307 bits (786), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 187/485 (38%), Positives = 266/485 (54%), Gaps = 70/485 (14%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYT-----KSGIIGVTQPR 58
LPI+ E+ I+E + N VV++ G TGSGK+TQL Q L G++ G+I +TQPR
Sbjct: 398 LPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPGMIAITQPR 457
Query: 59 RVAAVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPY 118
RVAAVS+A+RV++EL +V Y IRF+ + T IK++TDG+LLRE+ S+ L+ Y
Sbjct: 458 RVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPDTAIKFMTDGILLRELSSDFLLTAY 516
Query: 119 SVIILDEAHERSLNTDILLGLVKRLVNLR---------ASKLKILITSATLDGEKVSKFF 169
S +I+DEAHERS+NTDILLGL+ R+V LR LK++I SATL +V+ F
Sbjct: 517 SAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSATL---RVTDFS 573
Query: 170 SNC-------PTLNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTG 222
N P + + + YPV I ++ YL+ A IH R P G +L+F+TG
Sbjct: 574 ENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKVCLIHKRLPAGSILVFLTG 633
Query: 223 QDDIEKLVSKLEDK-IRSL------------------------DEGSCMDAV-------- 249
Q ++E+L L + +RS E +D V
Sbjct: 634 QQEVEQLCQMLRKRFVRSFRPLKSRARIVVSRKTMSVENEDLQSETEDIDQVPTSSSSSV 693
Query: 250 ----------ILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCG 299
+LPL+ L E Q++VF P R IV+TN+AETS+T+ + YV+DCG
Sbjct: 694 TYDDESEPMYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYVVDCG 753
Query: 300 YVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVP 359
K+R YN + + +V ISK A+QR GRAGRT PG CYRLY S V+ F ++P
Sbjct: 754 KAKERVYNEKTSVQKFEVRWISKANADQRAGRAGRTGPGHCYRLYSSAVFDSSFPLHSLP 813
Query: 360 EIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSI 419
EI R+ + VL +K++++ N+ F F P LE +LK L + AID G +T +
Sbjct: 814 EILRTPVESIVLQMKNMNID--NIANFPFPTSPGRSRLEKSLKLLSNLGAIDSEGVLTKL 871
Query: 420 GRTMA 424
G M+
Sbjct: 872 GEQMS 876
>sp|Q14147|DHX34_HUMAN Probable ATP-dependent RNA helicase DHX34 OS=Homo sapiens GN=DHX34
PE=1 SV=2
Length = 1143
Score = 299 bits (766), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 180/437 (41%), Positives = 261/437 (59%), Gaps = 29/437 (6%)
Query: 2 ANLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVA 61
A LPI QY I++T++++ VVVV G+TG GKSTQ+ Q L G++ + TQPRR+A
Sbjct: 160 AALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---VACTQPRRIA 216
Query: 62 AVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
+S+A+RV E + G +VGY IRFE S T I +LT G+LLR+I P L Y V+
Sbjct: 217 CISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLPQYEVL 276
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
I+DE HER L+ D LLG+++RL+ R LK+++ SAT++ S +FSN P + VPG+L
Sbjct: 277 IVDEVHERHLHNDFLLGVLQRLLPTRPD-LKVILMSATINISLFSSYFSNAPVVQVPGRL 335
Query: 182 YPVEILHSKER--PTSYLESALK--------TAIDIHVREPE--GDVLIFMTGQDDIEKL 229
+P+ +++ + PT+ L +ID H PE GD+L+F++G +I +
Sbjct: 336 FPITVVYQPQEAEPTTSKSEKLDPRPFLRVLESID-HKYPPEERGDLLVFLSGMAEISAV 394
Query: 230 VSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTV 289
+ + V+LPLH +L Q +VF PP R+ I+STNIAETS+T+
Sbjct: 395 LEAAQTYA-----SHTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTI 449
Query: 290 DGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVY 349
DG+ +V+D G VK+ Y+P + + L IS+ A QR GRAGRT PG C+RLY + Y
Sbjct: 450 DGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDY 509
Query: 350 HDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLID- 408
D F VPEI+R +L VL +KS+ + D F F++PP SLE A+ LYL D
Sbjct: 510 -DAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRT--FPFIEPPPPASLETAI--LYLRDQ 564
Query: 409 -AIDENGSITSIGRTMA 424
A+D + ++T IG +A
Sbjct: 565 GALDSSEALTPIGSLLA 581
>sp|P45018|HRPA_HAEIN ATP-dependent RNA helicase HrpA homolog OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=hrpA PE=3
SV=2
Length = 1304
Score = 293 bits (751), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 177/434 (40%), Positives = 256/434 (58%), Gaps = 27/434 (6%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAA 62
+LP+ Q + I + + ++ V+VV GETGSGK+TQL ++ G+ G+IG TQPRR+AA
Sbjct: 82 SLPVSQRKVEIQKLISEHQVIVVAGETGSGKTTQLPKMCLELGFGNLGMIGHTQPRRIAA 141
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
SVA R+A+EL LG VGY +RF D+ S+ T IK +TDG+LL EI ++ L+ YS +I
Sbjct: 142 RSVAARIAEELETELGGLVGYKVRFNDQISDNTQIKLMTDGILLAEIQNDRFLNQYSCLI 201
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
+DEAHERSLN D +LG +K+L+ R LK++ITSAT+D E+ SK F+N P + V G+ Y
Sbjct: 202 IDEAHERSLNNDFILGYLKQLLPRRRRDLKLIITSATIDVERFSKHFNNAPIIEVSGRTY 261
Query: 183 PVEILHS---KERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRS 239
PVE+ + +E L+ L A+D E GD+LIFM G+ +I D +
Sbjct: 262 PVEVRYRPVVEEDDQDQLQGIL-NAVDELQAEGRGDILIFMNGEREI-------RDTAEA 313
Query: 240 LDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCG 299
L + + ILPL L + Q ++F P N R +++TN+AETSLTV + YVID G
Sbjct: 314 LQKQNLKHTEILPLFARLSAQEQNKIFHPSGLN--RIVLATNVAETSLTVPSIKYVIDPG 371
Query: 300 YVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHD--EFLDVT 357
+ +Y+ + + L + IS+ ANQR GR GR G C RLY ++ EF D
Sbjct: 372 TARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEEDFNSRPEFTD-- 429
Query: 358 VPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAID------ 411
PEI R++LA +L + +L L DI F F+D P ++D +K L + A +
Sbjct: 430 -PEILRTNLASVILQMTALGLDDIEA--FPFVDAPDERHIQDGVKLLEELGAFETVQTKS 486
Query: 412 -ENGSITSIGRTMA 424
E +T +GR +A
Sbjct: 487 GEKRLLTRVGRQLA 500
>sp|Q9DBV3|DHX34_MOUSE Probable ATP-dependent RNA helicase DHX34 OS=Mus musculus GN=Dhx34
PE=2 SV=2
Length = 1145
Score = 291 bits (746), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 173/435 (39%), Positives = 258/435 (59%), Gaps = 25/435 (5%)
Query: 2 ANLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVA 61
A LPI QY I++T++++ VVVV G+TG GKSTQ+ Q L G++ + TQPRR+A
Sbjct: 162 AALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---VACTQPRRIA 218
Query: 62 AVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
+S+A+RV E + G +VGY IRFE S T I +LT G+LLR+I P L Y V+
Sbjct: 219 CISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLPQYQVL 278
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
I+DE HER L+ D LLG+++RL+ R LK+++ SAT++ S +FS+ P + VPG+L
Sbjct: 279 IVDEVHERHLHNDFLLGVLQRLLPQRPD-LKVILMSATINISLFSSYFSHAPVVQVPGRL 337
Query: 182 YPVEILHSKER------------PTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKL 229
+P+ +++ + P +L L+ + + E GD+L+F++G +I +
Sbjct: 338 FPITVVYQPQEADQTASKSEKLDPRPFLR-VLEAIDNKYPPEERGDLLVFLSGMAEITTV 396
Query: 230 VSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTV 289
+ + SL + V+LPLH +L Q +VF P R+ I+STNIAETS+T+
Sbjct: 397 LDAAQ-AYASLTQ----RWVVLPLHSALSVSDQDKVFDVAPAGVRKCILSTNIAETSVTI 451
Query: 290 DGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVY 349
DG+ +V+D G VK+ Y+P + + L IS+ A QR GRAGRT PG CYRLY + Y
Sbjct: 452 DGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRLYAESDY 511
Query: 350 HDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDA 409
D F VPEI+R +L VL +KS+ + D F F++PP S+E A+ L A
Sbjct: 512 -DAFAPYPVPEIRRVALDALVLQMKSMSVGDPRT--FPFIEPPPPASVETAILYLQEQGA 568
Query: 410 IDENGSITSIGRTMA 424
+D + ++T IG +A
Sbjct: 569 LDSSEALTPIGSLLA 583
>sp|P43329|HRPA_ECOLI ATP-dependent RNA helicase HrpA OS=Escherichia coli (strain K12)
GN=hrpA PE=3 SV=3
Length = 1300
Score = 290 bits (741), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 179/436 (41%), Positives = 260/436 (59%), Gaps = 31/436 (7%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAA 62
NLP+ Q ++ I+E + + VV+V GETGSGK+TQL +I G G+IG TQPRR+AA
Sbjct: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+VA R+A+EL G +GY +RF D S+ T++K +TDG+LL EI + L Y II
Sbjct: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
+DEAHERSLN D LLG +K L+ R LKI+ITSAT+D E+ S+ F+N P + V G+ Y
Sbjct: 196 IDEAHERSLNIDFLLGYLKELLPRRPD-LKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254
Query: 183 PVEILH------SKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDK 236
PVE+ + + + L+ A+ A+D +E GD+LIFM+G+ +I D
Sbjct: 255 PVEVRYRPIVEEADDTERDQLQ-AIFDAVDELSQESHGDILIFMSGEREI-------RDT 306
Query: 237 IRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVI 296
+L++ + ILPL+ L Q RVF + RR +++TN+AETSLTV G+ YVI
Sbjct: 307 ADALNKLNLRHTEILPLYARLSNSEQNRVFQ--SHSGRRIVLATNVAETSLTVPGIKYVI 364
Query: 297 DCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFL-- 354
D G + +Y+ + + L + IS+ ANQR GR GR G C RLY D+FL
Sbjct: 365 DPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE----DDFLSR 420
Query: 355 -DVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI--D 411
+ T PEI R++LA +L + +L L DI F F++ P +++D ++ L + AI D
Sbjct: 421 PEFTDPEILRTNLASVILQMTALGLGDIAA--FPFVEAPDKRNIQDGVRLLEELGAITTD 478
Query: 412 ENGS---ITSIGRTMA 424
E S +T +GR ++
Sbjct: 479 EQASAYKLTPLGRQLS 494
>sp|P0CE10|Y4102_ARATH Putative uncharacterized protein At4g01020, chloroplastic
OS=Arabidopsis thaliana GN=At4g01020 PE=4 SV=1
Length = 1787
Score = 260 bits (664), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 166/423 (39%), Positives = 241/423 (56%), Gaps = 25/423 (5%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAAV 63
LPI Y I++ + ++V+IGETGSGKSTQL Q L G S I TQPR++AA+
Sbjct: 303 LPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAM 362
Query: 64 SVARRVAQEL-GVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
++ RV +E G V F + + Y+TD LL+ + + LS S +I
Sbjct: 363 TLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVI 422
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
+DEAHERSLNTD+LL L+++L++ R L+++I SAT D ++S++ +C L+V G+ +
Sbjct: 423 IDEAHERSLNTDLLLALLRKLLSRRID-LRLVIMSATADANQLSQYLFDCGILHVNGRNF 481
Query: 183 PVEILHSKE---------RPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKL 233
PVEI++S R SY +K A++IH E EG +L F+T Q ++E +
Sbjct: 482 PVEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACERF 541
Query: 234 EDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVV 293
A+ LPLHG L E Q VF P R+ I +TNIAETSLT+ GV
Sbjct: 542 ----------VAPSAIALPLHGKLSFEEQFMVFQNYPGR-RKVIFATNIAETSLTIPGVK 590
Query: 294 YVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEF 353
YVID G VK+ +Y P +GM L V Q+S+ A QR GRAGRT PG+CYRLY T +
Sbjct: 591 YVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSKTDFDSMN 650
Query: 354 LDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDEN 413
L+ PEI+R L ++L + +L + N+ F+F+D P E++ A++ L + A+ E
Sbjct: 651 LNQE-PEIRRVHLGVALLRMLALGID--NIAAFEFVDAPVPEAIAMAIQNLVQLGAVVEK 707
Query: 414 GSI 416
+
Sbjct: 708 NGV 710
>sp|Q5ZI74|DHX30_CHICK Putative ATP-dependent RNA helicase DHX30 OS=Gallus gallus GN=DHX30
PE=2 SV=1
Length = 1231
Score = 253 bits (646), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 159/453 (35%), Positives = 260/453 (57%), Gaps = 38/453 (8%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRH----GYTKSGIIGVTQPRR 59
LP+ +++TI+ +EQNPVVV+ G+TG GK+T++ Q+L H G + +TQPRR
Sbjct: 478 LPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYILEGRGARCNVVITQPRR 537
Query: 60 VAAVSVARRVAQELGVRLGEEVGYAIRFEDRTSERT-LIKYLTDGVLLREILSNPDLSPY 118
++A+SVA+RVAQELG + + VGY +R E + R + + T G+LLR++ NP L
Sbjct: 538 ISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGNPSLEGV 597
Query: 119 SVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVP 178
S +++DE HER +NTD LL L+K + L L++++ SAT D ++ S +F CP + VP
Sbjct: 598 SHVVVDEVHERDVNTDFLLILLKGIQKLNPD-LRLVLMSATGDNQRFSHYFGGCPVVKVP 656
Query: 179 GKLYPV------EILHS--KERPTSY--------------LESALKTAIDIHVREPEGDV 216
G +YPV EIL + R Y L + L ID H EP G +
Sbjct: 657 GFMYPVKEYYLEEILAKLGRHRHRHYEIKQSDDECVLDLDLITDLVLQIDAH-GEP-GGI 714
Query: 217 LIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRF 276
L F+ G +I+ + +L + + S + ++LP+H ++P Q +F PPP R+
Sbjct: 715 LCFLPGWQEIKGVQQRLLEMLGSQNS----RYLVLPVHSNIPMMDQQNIFQRPPPGVRKI 770
Query: 277 IVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTR 336
+++TNIAETS+T++ +V+V+D G K+ +Y+ + + L+ V +SK QR GRAGR +
Sbjct: 771 VLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQ 830
Query: 337 PGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKF--DFLDPPSS 394
G Y L+P + D+ VPEI R+ L V+ K + + + ++F LD P
Sbjct: 831 SGFAYHLFPRSRL-DKMPTYQVPEILRTPLENLVVQAK-IHMPEKTAVEFLSKALDSPDI 888
Query: 395 ESLEDALKQLYLIDAIDENGSITSIGRTMAGTS 427
+++++A+ L I +D+ ++T++G+ +A S
Sbjct: 889 KAVDEAVILLQEIGVLDQREALTTLGKRLAQIS 921
>sp|Q7L2E3|DHX30_HUMAN Putative ATP-dependent RNA helicase DHX30 OS=Homo sapiens GN=DHX30
PE=1 SV=1
Length = 1194
Score = 249 bits (635), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 261/454 (57%), Gaps = 37/454 (8%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYT-----KSGIIGVTQP 57
LP+ + +TI+ +EQ+PVVV+ G+TG GK+T++ Q+L T + +I +TQP
Sbjct: 433 QLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVI-ITQP 491
Query: 58 RRVAAVSVARRVAQELGVRLGEEVGYAIRFEDRTSERT-LIKYLTDGVLLREILSNPDLS 116
RR++AVSVA+RV+ ELG L VG+ +R E + R + + T G+LLR++ SNP L
Sbjct: 492 RRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSNPSLE 551
Query: 117 PYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLN 176
S +I+DE HER +NTD LL L+K L L + L++++ SAT D E+ S++F CP +
Sbjct: 552 GVSHVIVDEVHERDVNTDFLLILLKGLQRLNPA-LRLVLMSATGDNERFSRYFGGCPVIK 610
Query: 177 VPGKLYPV---------------EILHSKERPTSYLESALK----TAIDIHV--REPEGD 215
VPG +YPV + LH S E AL T + +H+ R G
Sbjct: 611 VPGFMYPVKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGG 670
Query: 216 VLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRR 275
+L F+ G +I+ + +L++ + + E + ILP+H ++P Q +F PP R+
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEAL-GMHESKYL---ILPVHSNIPMMDQKAIFQQPPVGVRK 726
Query: 276 FIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRT 335
+++TNIAETS+T++ +V+V+D G K+ +Y+ + + L+ V +S+ QR GRAGR
Sbjct: 727 IVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRC 786
Query: 336 RPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKF--DFLDPPS 393
+ G Y L+P + ++ + VPEI R+ L VL K + + + ++F +D P+
Sbjct: 787 QSGFAYHLFPRSRL-EKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPN 844
Query: 394 SESLEDALKQLYLIDAIDENGSITSIGRTMAGTS 427
+++++A+ L I +D+ +T++G+ +A S
Sbjct: 845 IKAVDEAVILLQEIGVLDQREYLTTLGQRLAHIS 878
>sp|Q5R607|DHX30_PONAB Putative ATP-dependent RNA helicase DHX30 OS=Pongo abelii GN=DHX30
PE=2 SV=1
Length = 1194
Score = 247 bits (631), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 260/454 (57%), Gaps = 37/454 (8%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYT-----KSGIIGVTQP 57
LP+ + +TI+ +EQ+PVVV+ G+TG GK+T++ Q+L T + +I +TQP
Sbjct: 433 QLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVI-ITQP 491
Query: 58 RRVAAVSVARRVAQELGVRLGEEVGYAIRFEDRTSERT-LIKYLTDGVLLREILSNPDLS 116
RR++AVSVA+RV+ ELG L VG+ +R E + R + + T G+LLR++ SNP L
Sbjct: 492 RRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLE 551
Query: 117 PYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLN 176
S +I+DE HER +NTD LL L+K L L + L++++ SAT D E+ S++F CP +
Sbjct: 552 GVSHVIVDEVHERDVNTDFLLILLKGLQRLNPA-LRLVLMSATGDNERFSRYFGGCPVIK 610
Query: 177 VPGKLYPV---------------EILHSKERPTSYLESALK----TAIDIHV--REPEGD 215
VPG +YPV + LH S E AL T + +H+ R G
Sbjct: 611 VPGFMYPVKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGG 670
Query: 216 VLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRR 275
+L F+ G +I+ + +L++ + + E + ILP+H ++P Q +F PP R+
Sbjct: 671 ILCFLPGWQEIKGVQQRLQEAL-GMHESKYL---ILPVHSNIPMMDQKAIFQQPPVGVRK 726
Query: 276 FIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRT 335
+++TNIAETS T++ +V+V+D G K+ +Y+ + + L+ V +S+ QR GRAGR
Sbjct: 727 IVLATNIAETSTTINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRC 786
Query: 336 RPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKF--DFLDPPS 393
+ G Y L+P + ++ + VPEI R+ L VL K + + + ++F +D P+
Sbjct: 787 QSGFAYHLFPRSRL-EKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPN 844
Query: 394 SESLEDALKQLYLIDAIDENGSITSIGRTMAGTS 427
+++++A+ L I +D+ +T++G+ +A S
Sbjct: 845 IKAVDEAVILLQEIGVLDQREYLTTLGQRLAHIS 878
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 156,215,720
Number of Sequences: 539616
Number of extensions: 6538224
Number of successful extensions: 31818
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 164
Number of HSP's that attempted gapping in prelim test: 31008
Number of HSP's gapped (non-prelim): 412
length of query: 432
length of database: 191,569,459
effective HSP length: 120
effective length of query: 312
effective length of database: 126,815,539
effective search space: 39566448168
effective search space used: 39566448168
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)